BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003457
(818 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/415 (74%), Positives = 357/415 (86%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
SLLADKC SMHQLKQIHAQMI+S+RI D++AASRLL+FCALS SGDLSYA RLFN+ Q
Sbjct: 29 FSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQE 88
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
PN FMWNTLIRA ASSLNP +A+ LY++MRR P +HTF F+LKACSN +SL C Q+
Sbjct: 89 PNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQV 148
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
HTHV K GLDL+LHVVN LVR YSVS D+ NAR+VFDE+ R+L++WTTMISGYAQ++ +
Sbjct: 149 HTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCS 208
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
NEAL LFDQM++EG EPN TLASVLSACAQSGCL+LGE++HVF++ +G E+G ILGTAL
Sbjct: 209 NEALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTAL 268
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
VHMY KNGA+ A+ LFD++ ERN ATWNAMI GLA HGHA+EALD F KLEKEQIVPND
Sbjct: 269 VHMYAKNGAILMAQKLFDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPND 328
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
ITFVGVLSACCHAG + VGR+IF MKRVYGIEPKIEHYGCMVDLLGR G++LEAEELIK
Sbjct: 329 ITFVGVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIK 388
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
M WK DVV+ GALL +CKNHGNIE+AERVVKEI+ LEP+NHGVYVVLSNMYAEA
Sbjct: 389 GMAWKADVVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEA 443
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/414 (74%), Positives = 356/414 (85%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
SLLADKC SMHQLKQIHAQMI+S+RI D++AASRLL+FCALS SGDLSYA RLFN+ Q P
Sbjct: 32 SLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEP 91
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
N FMWNTLIRA ASSLNP +A+ LY++MRR P +HTF F+LKACSN +SL C Q+H
Sbjct: 92 NSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVH 151
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
THV K GLDL+LHVVN LVR YSVS D+ NAR+VFDE+ R+L++WTTMISGYAQ++ +N
Sbjct: 152 THVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSN 211
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LFDQM++EG EPN TLASVLSACAQSGCL+LGE++HVF++ +G E+G ILGTALV
Sbjct: 212 EALELFDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALV 271
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
HMY KNGA+ A+ LFD + ERN ATWNAMI GLA HGHA+EALD F KLEKEQIVPNDI
Sbjct: 272 HMYAKNGAILMAQKLFDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDI 331
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TFVGVLSACCHAG + VGR+IF MKRVYGIEPKIEHYGCMVDLLGR G++LEAEELIK
Sbjct: 332 TFVGVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKG 391
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
M WK DVV+ GALL +CKNHGNIE+AERVVKEI+ LEP+NHGVYVVLSNMYAEA
Sbjct: 392 MAWKADVVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEA 445
>gi|356570151|ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 465
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/438 (61%), Positives = 331/438 (75%), Gaps = 9/438 (2%)
Query: 1 MSLKCSSLRQPPL--PIPPLSLLADKCKSMHQLKQIHAQMIISSRI-QDHFAASRLLAFC 57
++ K + PPL + L+L++DKC ++ QLKQ+HAQMI+S+ + D FAASRL C
Sbjct: 2 LAPKLQPFKPPPLQRTLATLALISDKCTTLDQLKQVHAQMIVSAVVATDPFAASRLFFSC 61
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
ALS GDLS A R+F+S PN FMWNTLIRAQ + A+ LY+ MRR+ P +HT
Sbjct: 62 ALSPFGDLSLAFRIFHSTPRPNSFMWNTLIRAQTHA---PHALSLYVAMRRSNVLPGKHT 118
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F F+LKAC+ VRS +Q+H HV K GLD D HVV+ LVRCYSVS +ARQVFDE
Sbjct: 119 FPFLLKACARVRSFTASQQVHVHVIKFGLDFDSHVVDALVRCYSVSGHCVSARQVFDETP 178
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ ++WTTM+ GYAQ+F +NEAL LF+ M+ EGFEP TLASVLSACA+SGCLELGE+
Sbjct: 179 EKISSLWTTMVCGYAQNFCSNEALRLFEDMVGEGFEPGGATLASVLSACARSGCLELGER 238
Query: 238 VHVFVKMRGFEM--GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+H F+K++G + G ILGTALV+MY KNG +A A+ LFD MPERN+ TWNAMI GL ++
Sbjct: 239 IHEFMKVKGVGLGEGVILGTALVYMYAKNGEIAMARRLFDEMPERNVVTWNAMICGLGAY 298
Query: 296 GHAEEALDLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
G+ ++AL LF K++KE +VPN +TFVGVLSACCHAG IDVGR+IF SMK VYGIEPKIE
Sbjct: 299 GYVDDALGLFEKMKKEGVVVPNGVTFVGVLSACCHAGLIDVGREIFRSMKSVYGIEPKIE 358
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGC+VDLLGR G +LEA EL+K M WK DVV+ G LLAA + GN EVAERVVK+I+AL
Sbjct: 359 HYGCLVDLLGRGGWLLEAVELVKGMPWKADVVILGTLLAASRISGNTEVAERVVKDILAL 418
Query: 415 EPNNHGVYVVLSNMYAEA 432
EP NHGV+V LSNMYAEA
Sbjct: 419 EPQNHGVHVALSNMYAEA 436
>gi|225451437|ref|XP_002273876.1| PREDICTED: uncharacterized protein LOC100241149 [Vitis vinifera]
gi|147769956|emb|CAN70048.1| hypothetical protein VITISV_013370 [Vitis vinifera]
Length = 397
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/391 (66%), Positives = 313/391 (80%), Gaps = 3/391 (0%)
Query: 430 AEAESMKMQLEILLVQVLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPG 489
+ + ++MQL + L+ +LF LAS A LQNPDFESPP+NL N + PF LL NNTIPG
Sbjct: 4 SPSSEIRMQLGLCLLPILFIALASTAADLQNPDFESPPSNLPENSTAPFELLTANNTIPG 63
Query: 490 WTFEGTVQYVTASQTIRLPDNGHAIQLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCS 549
WTF+GTVQYVTA TI LP NGHAIQL QDG+INQTF A+ + + YILT TLA G QNCS
Sbjct: 64 WTFDGTVQYVTAGPTIALPGNGHAIQLGQDGKINQTFIANTNTMNYILTFTLALGDQNCS 123
Query: 550 ANANLVVSAPDSHGVYSLKQHYGKETWKSYGHYLGRWGQDEPINLVIRSQSTESDDNSTC 609
A A+++VSAPDS GV+SLKQHYGKETW+SYGHYLG W E INLVI+SQ+TE + NSTC
Sbjct: 124 AIADILVSAPDSRGVFSLKQHYGKETWESYGHYLGGWRDGEHINLVIQSQTTEPNPNSTC 183
Query: 610 WPVIDMLLLKTSKTLVQGNDNLLLNGGFEFGPDFLSNSTEGVLLESAPSPIQSALQQWSV 669
WP++D LLLK TL +GN NLL NGGFE GPDFLSNSTEG+LL+ SPIQSA+QQWSV
Sbjct: 184 WPIVDTLLLKGVATLDKGNGNLLPNGGFESGPDFLSNSTEGILLDPVSSPIQSAIQQWSV 243
Query: 670 IGTVKYIDSKHFYVPKGNAAIEIVS-VSAGIQTATTMLTEGSAYNLDFTLGDAKDACEGM 728
+GTVKYIDSK+++VP+GNAAIE +S +S GIQTA+T LTEGSAYNLDFTLGDA D+C G
Sbjct: 244 LGTVKYIDSKNYFVPEGNAAIEFISGISTGIQTAST-LTEGSAYNLDFTLGDANDSCVGT 302
Query: 729 FVVRVQAGSLVQNFTVQSLGTGSVIKHSVTFKAGSGSTPISFISYNINQTKDGVFCGPLI 788
F++ QAGS VQNFT+QS GTGS S+TFKA S TPISF+SY+ +QTKDGVFCGP++
Sbjct: 303 FILGAQAGSTVQNFTLQSKGTGSAKNFSMTFKADSSVTPISFLSYSSSQTKDGVFCGPVV 362
Query: 789 DDVVLRASHGFKLQLRLEILIYALV-LVAIL 818
D+V+L+AS+G K ++ ++ LV LVAIL
Sbjct: 363 DNVILQASYGLKPEIPSKVTFCWLVFLVAIL 393
>gi|255536905|ref|XP_002509519.1| conserved hypothetical protein [Ricinus communis]
gi|223549418|gb|EEF50906.1| conserved hypothetical protein [Ricinus communis]
Length = 383
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/380 (66%), Positives = 306/380 (80%), Gaps = 3/380 (0%)
Query: 441 ILLVQVLFAGLA-SAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQYV 499
+LLV +LF G A +AAD+LQNPDFE+PP ++ N ++PF LLN N+TIPGWTFEGTV YV
Sbjct: 4 VLLVSLLFIGSAFAAADLLQNPDFETPPLHVPRNSTSPFQLLNENSTIPGWTFEGTVVYV 63
Query: 500 TASQTIRLPDNGHAIQLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCSANANLVVSAP 559
TASQT+ LP +GHAIQL QDG+INQTF + Y+LT LAPGGQNCS + ++ VS P
Sbjct: 64 TASQTVALPGDGHAIQLIQDGKINQTFHPNASYSHYLLTFVLAPGGQNCSNSGSIGVSVP 123
Query: 560 DSHGVYSLKQHYGKETWKSYGHYLGRWGQDEPINLVIRSQSTESDDNSTCWPVIDMLLLK 619
D+H V+S KQHYGKE W++YG YLG W + EPINL+I SQ+TESD NSTCWPVID LL+K
Sbjct: 124 DNHAVFSFKQHYGKEGWETYGVYLGSWEEQEPINLIIESQATESDANSTCWPVIDKLLIK 183
Query: 620 TSKTLVQGNDNLLLNGGFEFGPDFLSNSTEGVLLESAPSPIQSALQQWSVIGTVKYIDSK 679
T++TL GNDNLLLNGGFEFGP+FL NSTEG+LL+ APSP+ SAL+QWS+ GTVKYIDSK
Sbjct: 184 TTETLAPGNDNLLLNGGFEFGPEFLFNSTEGILLDPAPSPVLSALRQWSITGTVKYIDSK 243
Query: 680 HFYVPKGNAAIEIVS-VSAGIQTATTMLTEGSAYNLDFTLGDAKDACEGMFVVRVQAGSL 738
H++VP+GNAA+E+VS VSAGIQTA T+ TEGS+Y+L+FTLGDA D+C G F+V QAG
Sbjct: 244 HYFVPEGNAAVEMVSGVSAGIQTAMTV-TEGSSYSLEFTLGDANDSCVGSFIVGAQAGPA 302
Query: 739 VQNFTVQSLGTGSVIKHSVTFKAGSGSTPISFISYNINQTKDGVFCGPLIDDVVLRASHG 798
QNFT+QS GTGS K S+ FKA S +T ISF+SY QTKDG+FCGP++D+VVLRASH
Sbjct: 303 AQNFTLQSNGTGSAKKLSLAFKADSMTTSISFVSYTTTQTKDGLFCGPVVDNVVLRASHA 362
Query: 799 FKLQLRLEILIYALVLVAIL 818
K ++ E LI L LVAIL
Sbjct: 363 IKSVMKWEGLIPLLFLVAIL 382
>gi|296082350|emb|CBI21355.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/376 (67%), Positives = 303/376 (80%), Gaps = 5/376 (1%)
Query: 445 QVLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQYVTASQT 504
+V+F L +A LQNPDFESPP+NL N + PF LL NNTIPGWTF+GTVQYVTA T
Sbjct: 15 EVIFGWLRTAD--LQNPDFESPPSNLPENSTAPFELLTANNTIPGWTFDGTVQYVTAGPT 72
Query: 505 IRLPDNGHAIQLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCSANANLVVSAPDSHGV 564
I LP NGHAIQL QDG+INQTF A+ + + YILT TLA G QNCSA A+++VSAPDS GV
Sbjct: 73 IALPGNGHAIQLGQDGKINQTFIANTNTMNYILTFTLALGDQNCSAIADILVSAPDSRGV 132
Query: 565 YSLKQHYGKETWKSYGHYLGRWGQDEPINLVIRSQSTESDDNSTCWPVIDMLLLKTSKTL 624
+SLKQHYGKETW+SYGHYLG W E INLVI+SQ+TE + NSTCWP++D LLLK TL
Sbjct: 133 FSLKQHYGKETWESYGHYLGGWRDGEHINLVIQSQTTEPNPNSTCWPIVDTLLLKGVATL 192
Query: 625 VQGNDNLLLNGGFEFGPDFLSNSTEGVLLESAPSPIQSALQQWSVIGTVKYIDSKHFYVP 684
+GN NLL NGGFE GPDFLSNSTEG+LL+ SPIQSA+QQWSV+GTVKYIDSK+++VP
Sbjct: 193 DKGNGNLLPNGGFESGPDFLSNSTEGILLDPVSSPIQSAIQQWSVLGTVKYIDSKNYFVP 252
Query: 685 KGNAAIEIVS-VSAGIQTATTMLTEGSAYNLDFTLGDAKDACEGMFVVRVQAGSLVQNFT 743
+GNAAIE +S +S GIQTA+T LTEGSAYNLDFTLGDA D+C G F++ QAGS VQNFT
Sbjct: 253 EGNAAIEFISGISTGIQTAST-LTEGSAYNLDFTLGDANDSCVGTFILGAQAGSTVQNFT 311
Query: 744 VQSLGTGSVIKHSVTFKAGSGSTPISFISYNINQTKDGVFCGPLIDDVVLRASHGFKLQL 803
+QS GTGS S+TFKA S TPISF+SY+ +QTKDGVFCGP++D+V+L+AS+G K ++
Sbjct: 312 LQSKGTGSAKNFSMTFKADSSVTPISFLSYSSSQTKDGVFCGPVVDNVILQASYGLKPEI 371
Query: 804 RLEILIYALV-LVAIL 818
++ LV LVAIL
Sbjct: 372 PSKVTFCWLVFLVAIL 387
>gi|255536907|ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549419|gb|EEF50907.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 413
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/365 (63%), Positives = 279/365 (76%), Gaps = 11/365 (3%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
+ DKC SM QLKQIHAQMI++SRI DHFAASRLL+FCALS+S D++YA +LF SIQ PN
Sbjct: 55 MVDKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNSRDINYAIKLFKSIQDPNI 114
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
FMWNT+IRA A+S NPD+A+F Y+ M R G PN++TF F+LK CS S+ CKQIHTH
Sbjct: 115 FMWNTIIRALANSSNPDQALFFYIQMLRLGVCPNKYTFPFLLKGCSFC-SIQSCKQIHTH 173
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
V K G DLDLHVVN LVR YS+ SDL +A ++F E R L++WTTMISGYAQ+F ANEA
Sbjct: 174 VLKFGSDLDLHVVNRLVRVYSIFSDLTDAWKLFGEFPERDLSIWTTMISGYAQNFCANEA 233
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L+LF++M+ EGFEPN T+ASVLS CA+SG L+LGE++H F+ RG E+G ILGTALVHM
Sbjct: 234 LVLFERMVAEGFEPNGPTIASVLSVCARSGSLDLGERIHGFMIERGVEIGVILGTALVHM 293
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y KNG + A+ LFDSM E+N+ATWNAM+ GLASHGHAEEAL LF KLEKE IVP D TF
Sbjct: 294 YAKNGKILVARKLFDSMTEKNVATWNAMLCGLASHGHAEEALSLFWKLEKEHIVPIDATF 353
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
VGVLSACCHAG IDVGR+IF SMK YG +I+ G C + +++L R +
Sbjct: 354 VGVLSACCHAGLIDVGRRIFYSMKESYG-SGRIK---------GTCIVICCSQDLFYRPI 403
Query: 381 WKPDV 385
K +V
Sbjct: 404 LKDEV 408
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 3/244 (1%)
Query: 161 SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLA 220
S S D+N A ++F I++ + +W T+I A S ++AL + QML G PN T
Sbjct: 94 SNSRDINYAIKLFKSIQDPNIFMWNTIIRALANSSNPDQALFFYIQMLRLGVCPNKYTFP 153
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
+L C+ ++ +++H V G ++ + LV +Y+ L A LF PER
Sbjct: 154 FLLKGCSFCS-IQSCKQIHTHVLKFGSDLDLHVVNRLVRVYSIFSDLTDAWKLFGEFPER 212
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
+++ W MISG A + A EAL LF ++ E PN T VLS C +G +D+G +I
Sbjct: 213 DLSIWTTMISGYAQNFCANEALVLFERMVAEGFEPNGPTIASVLSVCARSGSLDLGERIH 272
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
G M G+E + +V + + GK+L A +L M K +V W A+L +HG+
Sbjct: 273 GFMIE-RGVEIGVILGTALVHMYAKNGKILVARKLFDSMTEK-NVATWNAMLCGLASHGH 330
Query: 401 IEVA 404
E A
Sbjct: 331 AEEA 334
>gi|297811537|ref|XP_002873652.1| hypothetical protein ARALYDRAFT_488247 [Arabidopsis lyrata subsp.
lyrata]
gi|297319489|gb|EFH49911.1| hypothetical protein ARALYDRAFT_488247 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/379 (56%), Positives = 276/379 (72%), Gaps = 12/379 (3%)
Query: 446 VLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQYVTASQTI 505
+L +++D L+NPDFESPP NLT N + V L+ N+T+PGWTF+GTV YV
Sbjct: 11 LLLVSCCASSDFLENPDFESPPLNLTTNSNASSVSLDQNSTLPGWTFQGTVLYV------ 64
Query: 506 RLPDNGHAIQLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCSANANLVVSAPDSHGVY 565
LPD GHA+QL++DG+INQTF A GDDL YILT L GQNCS++A L VS PDS+ V+
Sbjct: 65 ELPDTGHAVQLSEDGKINQTFIAKGDDLNYILTFALIHAGQNCSSSAGLSVSGPDSNAVF 124
Query: 566 SLKQHYGKETWKSYGHYLGRWGQDEPINLVIRSQS--TESDDNSTCWPVIDMLLLKT-SK 622
S +Q+Y K +W+SY H LG WG +PINLV+ SQ+ ++SD NSTCWP+ID LL+KT
Sbjct: 125 SYRQNYSKVSWQSYSHNLGSWGNGQPINLVLESQAIDSDSDTNSTCWPIIDTLLIKTVGV 184
Query: 623 TLVQGNDNLLLNGGFEFGPDFLSNSTEGVLLESAPSPIQSALQQWSVIGTVKYIDSKHFY 682
TLVQ + NLL+NGGFE GP FL NST+GVL+++ PS IQS L+QWSVIGTV+YIDS+HF+
Sbjct: 185 TLVQDSGNLLINGGFESGPGFLPNSTDGVLIDAVPSLIQSPLRQWSVIGTVRYIDSEHFH 244
Query: 683 VPKGNAAIEIVSVSA--GIQTATTMLTEGSAYNLDFTLGDAKDACEGMFVVRVQAGSLVQ 740
VP+G AAIEI+S +A GIQTAT +EGS YNL FTLGDA DAC G FVV VQAGS Q
Sbjct: 245 VPEGKAAIEILSYTAPSGIQTATKGTSEGSRYNLTFTLGDANDACRGHFVVGVQAGSATQ 304
Query: 741 NFTVQSLGTGSVIKHSVTFKAGSGSTPISFISYNINQTKDGVFCGPLIDDVVLRASHGF- 799
NFT++S GTGS K + F+A + ISF SY+ TK+ V CGP++D+V++ G
Sbjct: 305 NFTLESNGTGSGEKFGLVFEADKDAAQISFTSYSATMTKEDVVCGPVVDEVIVHPLGGTA 364
Query: 800 KLQLRLEILIYALVLVAIL 818
++ +LI+AL+ VA+L
Sbjct: 365 SVKPTWLLLIFALLYVAVL 383
>gi|413920848|gb|AFW60780.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 478
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/424 (51%), Positives = 286/424 (67%), Gaps = 7/424 (1%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRI-QDHFAASRLL-AFCALSSSGDLSYATRLFN 73
P LSLLAD+C + L ++HA M++S R+ +D FAASRLL A+ ALS + L +
Sbjct: 19 PNLSLLADRCATPCALARVHAAMLVSGRLAEDAFAASRLLDAYVALSPDPAAAALALLSS 78
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVR-SL 131
+PN FM+NT +R ASS +P A + + TG P +HTF F+LKA + + SL
Sbjct: 79 LPCAPNSFMFNTTLRVLASSPDPATAFPFFSRIHGTGALVPGRHTFPFLLKAAARLPLSL 138
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+Q+H + G+ LD +V N LVR YSV+ L AR+VFDE+ R V+TTM+S Y
Sbjct: 139 PVTEQLHALAVRHGVHLDAYVANGLVRAYSVAGLLRPARRVFDEVPERNAAVYTTMVSAY 198
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS--GCLELGEKVHVFVKMRGFEM 249
AQ+ R +A+ F QM+ GFEP LASVLSACA+S G LE+G VH + RG +
Sbjct: 199 AQNGRHEDAMAAFVQMVRVGFEPCGAALASVLSACARSPSGGLEMGRHVHDLMVARGVAV 258
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNI-ATWNAMISGLASHGHAEEALDLFRKL 308
G ILGTALV MY KNGA+ +A A+FD +PER + A WN +ISGLA+ GH E ALD FR++
Sbjct: 259 GPILGTALVDMYVKNGAIEEALAVFDGLPERRVPAAWNPLISGLANLGHGERALDFFRRM 318
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
++E + PN T VG LSAC H G +D R++F SM++ +GI P I+HYGCMVDLLGR G
Sbjct: 319 QREGVPPNATTLVGALSACSHPGLLDEARRLFRSMEKDFGIVPGIQHYGCMVDLLGRAGL 378
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EAE++I+ M K D V+WGALL ACKNHG IE+AER E++ L P+NHGVYVVLSN+
Sbjct: 379 LSEAEDMIREMSCKADTVIWGALLTACKNHGVIEIAERAAVEMLKLNPSNHGVYVVLSNL 438
Query: 429 YAEA 432
YAEA
Sbjct: 439 YAEA 442
>gi|253761503|ref|XP_002489130.1| hypothetical protein SORBIDRAFT_0019s004710 [Sorghum bicolor]
gi|241947229|gb|EES20374.1| hypothetical protein SORBIDRAFT_0019s004710 [Sorghum bicolor]
Length = 489
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/424 (51%), Positives = 287/424 (67%), Gaps = 7/424 (1%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRI-QDHFAASRLL-AFCALSSSGDLSYATRLFN 73
P LSLLAD+C + L ++HA MI+S R+ +D FAASRLL A+ ALS + L +
Sbjct: 19 PNLSLLADRCATPSALARVHAAMIVSGRLAEDAFAASRLLTAYAALSPDPAAAALALLSS 78
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVR-SL 131
+PN FM NT +R ASS +P A + +R TG AP +HTF F+LKA + + L
Sbjct: 79 LPCAPNSFMLNTTLRVLASSPDPAAAFPFFSRLRVTGALAPGRHTFPFLLKAAARLPLPL 138
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+Q+H + G+ LD +V N LVR YSV+ L AR+VFDE+ R V+TTM+S Y
Sbjct: 139 PVTEQLHALAVRHGVLLDAYVANGLVRGYSVAGRLQAARRVFDELPERNPAVYTTMVSAY 198
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS--GCLELGEKVHVFVKMRGFEM 249
AQ+ R +A+ FD+M+ GFEP TLASVLSACA+S G LE+G VH + G +
Sbjct: 199 AQNGRHEDAMAAFDEMVRVGFEPCGATLASVLSACARSASGGLEMGCHVHDLMTAWGVPV 258
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNI-ATWNAMISGLASHGHAEEALDLFRKL 308
ILGTAL+ MY KNGA+ +A A+ D +PER++ WNA+ISGLA HGH E AL+LFR++
Sbjct: 259 STILGTALIDMYVKNGAIKEAFAVLDGLPERHVTGAWNALISGLAHHGHRERALNLFRQM 318
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
++E + PN T VG LSAC H G +D R++F SM++ +GI P I+HYGCMVDLLGR G
Sbjct: 319 QQEGVPPNATTLVGALSACSHPGLLDEARRLFSSMEKDFGITPAIQHYGCMVDLLGRAGL 378
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EAE+LI+ M + D V+WGALL ACKNH IE+AER E++ L+P+NHGVYVVLSN+
Sbjct: 379 LSEAEDLIRGMSCEADTVIWGALLTACKNHSGIEIAERAAVEMLKLDPSNHGVYVVLSNL 438
Query: 429 YAEA 432
YAEA
Sbjct: 439 YAEA 442
>gi|15241320|ref|NP_196919.1| uncharacterized protein [Arabidopsis thaliana]
gi|9757796|dbj|BAB08294.1| unnamed protein product [Arabidopsis thaliana]
gi|332004610|gb|AED91993.1| uncharacterized protein [Arabidopsis thaliana]
Length = 383
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/379 (56%), Positives = 275/379 (72%), Gaps = 12/379 (3%)
Query: 446 VLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQYVTASQTI 505
+L +++D L+NPDFESPP NL N + V L+ N+T+PGWTF+GTV YV
Sbjct: 11 LLLVSCCASSDFLENPDFESPPLNLPTNSNASSVSLDQNSTLPGWTFQGTVLYV------ 64
Query: 506 RLPDNGHAIQLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCSANANLVVSAPDSHGVY 565
LPD GHA+QL +DG+INQTF A GD+L YILT L GQNC+++A L VS PDS+ V+
Sbjct: 65 ELPDTGHAVQLGEDGKINQTFIAKGDELNYILTFALIHAGQNCTSSAGLSVSGPDSNAVF 124
Query: 566 SLKQHYGKETWKSYGHYLGRWGQDEPINLVIRSQS--TESDDNSTCWPVIDMLLLKT-SK 622
S +Q+Y K +W+SY H LG WG EPINLV+ SQ+ ++SD NSTCWP+ID LL+KT
Sbjct: 125 SYRQNYSKVSWQSYSHNLGSWGNGEPINLVLESQAIDSDSDTNSTCWPIIDTLLIKTVGV 184
Query: 623 TLVQGNDNLLLNGGFEFGPDFLSNSTEGVLLESAPSPIQSALQQWSVIGTVKYIDSKHFY 682
TLVQ + NLL+NGGFE GP FL NST+GVL+++ PS IQS L+QWSVIGTV+YIDS+HF+
Sbjct: 185 TLVQDSGNLLINGGFESGPGFLPNSTDGVLIDAVPSLIQSPLRQWSVIGTVRYIDSEHFH 244
Query: 683 VPKGNAAIEIVSVSA--GIQTATTMLTEGSAYNLDFTLGDAKDACEGMFVVRVQAGSLVQ 740
VP+G AAIEI+S +A GIQTAT +EGS YNL FTLGDA DAC G FVV QAGS+ Q
Sbjct: 245 VPEGKAAIEILSNTAPSGIQTATKGTSEGSRYNLTFTLGDANDACRGHFVVGAQAGSVTQ 304
Query: 741 NFTVQSLGTGSVIKHSVTFKAGSGSTPISFISYNINQTKDGVFCGPLIDDVVLRASHGF- 799
NFT++S GTGS K + F+A + ISF SY++ TK+ V CGP+ID+V++ G
Sbjct: 305 NFTLESNGTGSGEKFGLVFEADKDAAQISFTSYSVTMTKENVVCGPVIDEVMVHPLGGTA 364
Query: 800 KLQLRLEILIYALVLVAIL 818
++ +LI+AL+ VA+L
Sbjct: 365 SVKPTWLLLIFALLYVAVL 383
>gi|195614306|gb|ACG28983.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 478
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/424 (50%), Positives = 284/424 (66%), Gaps = 7/424 (1%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRI-QDHFAASRLL-AFCALSSSGDLSYATRLFN 73
P LSLLAD+C + L ++HA M++S R+ +D FAASRLL A+ LS + L +
Sbjct: 19 PNLSLLADRCATPCALARVHAAMLVSGRLAEDAFAASRLLDAYVELSPDPAAAALALLSS 78
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVR-SL 131
+PN FM+NT +R ASS +P + + TG P +HTF F+LKA + + SL
Sbjct: 79 LPCAPNSFMFNTTLRVLASSPDPATTFPFFSRIHGTGALVPGRHTFPFLLKAAARLPLSL 138
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+Q+H + G+ LD +V N LVR YSV+ L AR+VFDE+ R V+TTM+S Y
Sbjct: 139 PVTEQLHALAVRHGVHLDAYVANGLVRAYSVAGLLRPARRVFDEVPERNATVYTTMVSAY 198
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS--GCLELGEKVHVFVKMRGFEM 249
AQ+ R +A+ F QM+ GFEP LASVLSACA+S G LE+G VH + RG +
Sbjct: 199 AQNGRHEDAMAAFVQMVRVGFEPGGAALASVLSACARSPSGGLEMGRHVHDLMVARGVAV 258
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNI-ATWNAMISGLASHGHAEEALDLFRKL 308
G ILGTALV MY KNGA+ +A A+FD +PER + A WN +ISGLA+ GH E ALD FR++
Sbjct: 259 GPILGTALVDMYVKNGAIEEALAVFDGLPERRVPAAWNPLISGLANLGHGERALDFFRRM 318
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
++E + PN T VG LSAC H G +D R++F SM+ +GI P I+HYGCMVDLLGR G
Sbjct: 319 QREGVPPNATTLVGALSACSHPGLLDEARRLFRSMENDFGIVPGIQHYGCMVDLLGRAGL 378
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EAE++I+ M K D V+WGALL ACKNHG IE+AER E++ L+P+NHGVYVVLSN+
Sbjct: 379 LSEAEDMIREMSCKADTVIWGALLTACKNHGVIEIAERAAVEMLKLDPSNHGVYVVLSNL 438
Query: 429 YAEA 432
YAEA
Sbjct: 439 YAEA 442
>gi|357152230|ref|XP_003576051.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 468
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/437 (50%), Positives = 293/437 (67%), Gaps = 20/437 (4%)
Query: 11 PPLPIP-----PLSLLADKCKSMHQLKQIHAQMIISSRIQDH-FAASRLL-AFCALSSSG 63
PPLP LSLLAD+C ++ L +HA M++S R+ D FAASRLL A+ LS
Sbjct: 4 PPLPGAGRRHMSLSLLADRCSTLRGLALVHAAMLVSGRLADDAFAASRLLNAYANLSPPA 63
Query: 64 DLSYATRLFNSIQ-SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG---FAPNQHTFT 119
+ R +S+ +PN FM NT +RA ASS +P A + RR+G ++P +HTF
Sbjct: 64 AV---LRFLSSLPYAPNSFMLNTTLRALASSPDPASAFPFFSLHRRSGSSSYSPGRHTFP 120
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
F+LKA + + +L +QIH V K GL LD +V N LVR YSV+ + AR+VFD + R
Sbjct: 121 FLLKASARL-ALPVSQQIHALVVKHGLHLDTYVANGLVRAYSVAGLIGVARKVFDGLPER 179
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA--QSGCLELGEK 237
+ V+TTM+SGY + +A+ F +M+ EGFEP V LASVLSACA +SG L +G +
Sbjct: 180 STVVYTTMVSGYTLNGCYEDAMGAFGEMINEGFEPGDVVLASVLSACARSESGGLVIGRR 239
Query: 238 VHVFVKMRGFE--MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
VH ++MRG E +G IL TALV MY KN A+ +A +F MPER ATWNA+ISGLA H
Sbjct: 240 VHNIIEMRGVEAPVGVILSTALVDMYAKNAAIEEAVTVFKGMPERRTATWNALISGLAHH 299
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
GH + AL +F+++ +E + PN TFVGVLSA C +G ID R+ F SMK +G+ P I+H
Sbjct: 300 GHGKYALVMFQQMLQEGVPPNATTFVGVLSAYCLSGMIDEARKAFRSMKD-FGLTPSIQH 358
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
YGCMVDLLGR G ++EAEE+I+ M + D ++WGALL AC+NHGNI++A R EI+ L+
Sbjct: 359 YGCMVDLLGRSGLLVEAEEMIRGMTCEADTMIWGALLTACRNHGNIDIALRTALEILKLD 418
Query: 416 PNNHGVYVVLSNMYAEA 432
P NHGVYVVLSN+YA+A
Sbjct: 419 PENHGVYVVLSNIYADA 435
>gi|449455950|ref|XP_004145713.1| PREDICTED: uncharacterized protein LOC101207350 [Cucumis sativus]
gi|449521186|ref|XP_004167611.1| PREDICTED: uncharacterized LOC101207350 [Cucumis sativus]
Length = 399
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/369 (52%), Positives = 255/369 (69%), Gaps = 7/369 (1%)
Query: 453 SAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQYVTASQ--TIRLPDN 510
++ + L+N DFESPP+N N + V L NNT PGWTF+G V+Y+T Q I LPD
Sbjct: 32 TSREFLKNADFESPPSNFPENSNKTSVALKENNTFPGWTFQGAVEYITVDQIKNISLPDK 91
Query: 511 GHAIQLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCSANANLVVSAPDSHGVYSLKQH 570
GHAI L +DG+INQTF AD D L Y+LT LAPGG NCS A L +SAPDS ++S QH
Sbjct: 92 GHAILLGEDGKINQTFTADADILTYLLTFALAPGGHNCSLTAPLQISAPDSDALFSFSQH 151
Query: 571 YGKETWKSYGHYLGRWGQDEPINLVIRSQSTESDDNSTCWPVIDMLLLKTSKTLVQGNDN 630
YGK+ W+ +G YLG WG E +NL I SQS +D TCWP +D L +KT ++ DN
Sbjct: 152 YGKQPWEVHGVYLGSWGDRESVNLEIMSQS--NDSTPTCWPAVDSLHIKTMGIVMPDGDN 209
Query: 631 LLLNGGFEFGPDFLSNSTEGVLLESAPSPIQSALQQWSVIGTVKYIDSKHFYVPKGNAAI 690
L++NGGFE+GPDFL +S GVLL+S P+ S L QW+++G V+YI+SKHF+VP+GN A+
Sbjct: 210 LVVNGGFEYGPDFLESSEGGVLLDSVPTTFFSPLIQWAILGKVRYINSKHFFVPQGNTAV 269
Query: 691 EIVS-VSAGIQTATTMLTEGSAYNLDFTLGDAKDACEGMFVVRVQAGSLVQNFTVQSLGT 749
E+VS VS+G+Q A L GS+Y L FTLGDA D+C+ F+V QAG +NFT++S GT
Sbjct: 270 ELVSGVSSGLQ-AVPKLQAGSSYTLSFTLGDANDSCKATFLVGAQAGLTSRNFTLESNGT 328
Query: 750 GSVIKHSVTFKAGSGSTPISFISYNINQTKDGVFCGPLIDDVVLRASHGFKLQLRLEILI 809
GS K S+TF AG I+ +SY +QTKDG FCGP+IDDV+LR S G ++ + + LI
Sbjct: 329 GSAAKFSMTFTAGPDVNTITLLSYTTSQTKDGDFCGPVIDDVILRVSRGLRISVPWKSLI 388
Query: 810 YALVLVAIL 818
+L L+ I+
Sbjct: 389 -SLCLITIV 396
>gi|297728355|ref|NP_001176541.1| Os11g0483950 [Oryza sativa Japonica Group]
gi|77550893|gb|ABA93690.1| pentatricopeptide repeat-containing protein, putative [Oryza sativa
Japonica Group]
gi|125577152|gb|EAZ18374.1| hypothetical protein OsJ_33904 [Oryza sativa Japonica Group]
gi|255680094|dbj|BAH95269.1| Os11g0483950 [Oryza sativa Japonica Group]
Length = 478
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/432 (48%), Positives = 285/432 (65%), Gaps = 19/432 (4%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDH-FAASRLLA-FCALSSSGDLSYATRLFN 73
P LSLLAD+C + L +HA M++S R+ D FAASRLLA ALS G + RL
Sbjct: 19 PNLSLLADRCATPRALAAVHAAMLVSGRLADDAFAASRLLAAHAALSPPGAV---LRLLA 75
Query: 74 SIQ-SPNHFMWNTLIRAQASSLNPDKAIFLY------MNMRRTGFAPNQHTFTFVLKACS 126
S+ +PN FM N +RA ASS +P A+ + ++P +HTFTF+LKA +
Sbjct: 76 SLPCAPNSFMLNITLRALASSPDPASALRFFSLLRRGSGGGGGSYSPGRHTFTFLLKASA 135
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
+ L +Q+H + GL+ D +V N LVR YS++ + AR+VFD + R+ V TT
Sbjct: 136 RL-PLRASEQLHALAVRHGLERDAYVANGLVRAYSLAGLVPLARRVFDGLPERSAVVCTT 194
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC--LELGEKVHVFVKM 244
M+SGYAQ+ +A+ F++M+ +G EP+ LASVLS+CA+SG LE+G +VH ++
Sbjct: 195 MVSGYAQNGMHEDAMRSFEEMVGDGIEPHGAALASVLSSCARSGSRGLEMGRRVHELMES 254
Query: 245 RGFE---MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
R +GAILGTALV MY K GA+ +A A+FD MPER ATWNA+I+GLA HGH E A
Sbjct: 255 RRVTAPVVGAILGTALVDMYAKTGAMEEATAVFDRMPERQTATWNALITGLAHHGHGEVA 314
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L F ++ ++ + PN T VGVLSA G +D R++F SM++ + + P I+HYGCMVD
Sbjct: 315 LATFHRMRRDGVPPNGATLVGVLSAYGCTGRLDEARRVFASMEKDFAVAPTIQHYGCMVD 374
Query: 362 LLGRCGKVLEAEELIKRM-VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
LLGR G + EAEE+I+ M D V+WGALL ACKNHG+I+VAER V+E++ L+P NHG
Sbjct: 375 LLGRSGLLTEAEEMIRGMTTCDADTVIWGALLNACKNHGDIDVAERAVQEMLKLDPGNHG 434
Query: 421 VYVVLSNMYAEA 432
VYVVLSNMYAEA
Sbjct: 435 VYVVLSNMYAEA 446
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/452 (41%), Positives = 274/452 (60%), Gaps = 33/452 (7%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD--LSYATRLFNSIQSPNH 80
+ C + LK IHA MI + I D FAASRL+AFC SSG + YA+R+F+ IQ+PN
Sbjct: 25 ETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNL 84
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F++N +IR + S NPD+A Y+ +R G P+ TF F++K+C+ + ++ Q H H
Sbjct: 85 FIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGH 144
Query: 141 VSKSGLDLDLHVVNCLVRCYSV-------------------------------SSDLNNA 169
+ K G + D++V N LV Y+ D+ +A
Sbjct: 145 IIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESA 204
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
R++FD++ + L W+TMISGYAQ+ ++A+ LF + +G N + SV+S+CA
Sbjct: 205 RKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHL 264
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
G LELGE+ H +V G + ILGTALV MY + G++ KA +F+ +PER+ +W A+I
Sbjct: 265 GALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALI 324
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
+GLA HG++E +L F + + + P DITF VLSAC H G ++ G QIF SMKR + +
Sbjct: 325 AGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRV 384
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
EP++EHYGCMVDLLGR GK+ EAE + +M KP+ +WGALL AC+ H N E+ ERV K
Sbjct: 385 EPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGK 444
Query: 410 EIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
+I L P + G YV+LSN+YA A+ + E+
Sbjct: 445 ILIQLLPQHSGYYVLLSNIYANAKEWEKVTEM 476
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 187/462 (40%), Positives = 275/462 (59%), Gaps = 33/462 (7%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRL 71
P PP+ A+ S+ +L Q HA ++ S I FAASRL+A + +S + YA +
Sbjct: 5 FPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSI 64
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F+ I +PN +MWNT+IRA A+S P+ A+ ++ M P+++TFTF LK+C + +
Sbjct: 65 FSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGV 124
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL---------- 181
+QIH HV K+GL DL + N L+ Y+ + +AR + D + R +
Sbjct: 125 EEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAY 184
Query: 182 --------------------NV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
NV W MI+GY+ + R +E L+LF+ M G +P++ TL
Sbjct: 185 AERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTL 244
Query: 220 ASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE 279
SVLSACA G L GE VH ++ G + + TALV MY+K G++ KA +F+S
Sbjct: 245 VSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLR 304
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
++I+TWN++ISGL++HG + AL +F ++ E PN++TFV VLSAC AG +D GR++
Sbjct: 305 KDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREM 364
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
F M V+GI+P IEHYGCMVDLLGR G + EAEEL+++M K V+W +LL AC+NHG
Sbjct: 365 FNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHG 424
Query: 400 NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
N+E+AERV ++++ L P +V LSNMYA K +E+
Sbjct: 425 NVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEV 466
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 265/443 (59%), Gaps = 31/443 (6%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +C +M +L+QIH QM+ + I D AS+LLAFCA +SG L+YA +F+ I PN
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
FMWNT+IR ++S P++A+ LY +M N +TF F+LKACS++ +L +QIH H
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAH 143
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ------- 193
+ K G +++ N L+ YS S D+ +AR +FD++ R W +MI GY +
Sbjct: 144 IIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMA 203
Query: 194 ------------------------SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
+ + EAL LF +M G + ++V L S L ACA
Sbjct: 204 YEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADL 263
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
G L+ G+ +H ++K E+ ILG L+ MY K G L +A +F M E+ ++ W AMI
Sbjct: 264 GVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMI 323
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
SG A HG EAL+ F K++ + PN +TF G+L+AC HAG + + +F SM+R++G
Sbjct: 324 SGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGF 383
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+P IEHYGCMVDLLGR G + EAEELI+ M KP+ +WGALL AC HGN+E+ +++ K
Sbjct: 384 KPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGK 443
Query: 410 EIIALEPNNHGVYVVLSNMYAEA 432
+I ++P + G Y+ L++++A A
Sbjct: 444 ILIQVDPGHGGRYIHLASIHAAA 466
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/443 (40%), Positives = 264/443 (59%), Gaps = 31/443 (6%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +C +M +L+QIH QM+ + I D AS+LLAFCA +SG L+YA +F+ I PN
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
FMWNT+IR ++S P++A+ LY +M N +TF F+LKACS++ + +QIH H
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAH 143
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ------- 193
+ K G +++ N L+ YS S D+ +AR +FD++ R W +MI GY +
Sbjct: 144 IIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMA 203
Query: 194 ------------------------SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
+ + EAL LF +M G + ++V L S L ACA
Sbjct: 204 YEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADL 263
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
G L+ G+ +H ++K E+ ILG L+ MY K G L +A +F M E+ ++ W AMI
Sbjct: 264 GVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMI 323
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
SG A HG EAL+ F K++ + PN +TF G+L+AC HAG + + +F SM+R++G
Sbjct: 324 SGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGF 383
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+P IEHYGCMVDLLGR G + EAEELI+ M KP+ +WGALL AC HGN+E+ +++ K
Sbjct: 384 KPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGK 443
Query: 410 EIIALEPNNHGVYVVLSNMYAEA 432
+I ++P + G Y+ L++++A A
Sbjct: 444 ILIQVDPGHGGRYIHLASIHAAA 466
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/455 (40%), Positives = 271/455 (59%), Gaps = 34/455 (7%)
Query: 8 LRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
LR+ L P LS L + C ++ LK IHA +I + I D FAAS L++ + L Y
Sbjct: 9 LRKLELKNPKLSFL-ESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISI--NKNLLDY 65
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++F IQ+PN F++N+ IR + S +PDK+ Y+ +R G P+ T+ F++KAC+
Sbjct: 66 AAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQ 125
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV------------------------- 162
SL+ Q H + + G D D++V N LV YS
Sbjct: 126 KGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSM 185
Query: 163 ------SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
S D+ +AR++FD++ + L W+ MISGYA++ ++A+ L+ + EG N
Sbjct: 186 VAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANE 245
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+ SV+++CA G LELGE+ H ++ + ILGTALV MY + G++ KA +FD
Sbjct: 246 TVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQ 305
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+P R+ +W +I+G A HG+AE+AL+ F ++EK + P +ITF VLSAC H G ++ G
Sbjct: 306 LPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERG 365
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
++F SMKR Y IEP++EHYGCMVDLLGR GK+ EAE+ + M KP+ +WGALL AC+
Sbjct: 366 LELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACR 425
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
H N E+AER K +I L+P + G YV+LSN+YA
Sbjct: 426 IHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYAR 460
>gi|255547736|ref|XP_002514925.1| conserved hypothetical protein [Ricinus communis]
gi|223545976|gb|EEF47479.1| conserved hypothetical protein [Ricinus communis]
Length = 383
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/382 (48%), Positives = 248/382 (64%), Gaps = 11/382 (2%)
Query: 442 LLVQVLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQYVTA 501
+L+ LF G+ S D+LQNPDFESPPTN+T N S P +L NG N IPGW+F G+V YVTA
Sbjct: 5 MLLLFLFVGI-STGDLLQNPDFESPPTNITSNTSKPILLQNGINKIPGWSFGGSVWYVTA 63
Query: 502 SQTIRLPDNGHAIQLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCSANANLV-VSAPD 560
+ LP GH +QL QDG+INQTF AD +LT TLAPG + CS N V VS P
Sbjct: 64 GSNLSLPGEGHGLQLGQDGKINQTFKADSS--YSVLTFTLAPGSKECSNNTVAVNVSTPR 121
Query: 561 SHGVYSLKQHYGKETWKSYGHYLGRWGQDEPINLVIRSQSTESDDNSTCWPVIDMLLLKT 620
V+S+++HYGKETW+S+ Y W D+ INL I+ E+ N C PV+D ++
Sbjct: 122 RSKVFSMERHYGKETWESHAFYFESW--DDVINLEIQGIPLETRTNIICSPVVDTFIINQ 179
Query: 621 SKTLVQGNDNLLLNGGFEFGPDFLSNSTEGVLLESAPSPIQSALQQWSVIGTVKYIDSKH 680
+ V DNL++NGGFE GP FL +S++G+LL+ P ++S LQQWS+IGTVKYIDS H
Sbjct: 180 IGSTVIYGDNLVVNGGFEVGPAFLKSSSKGILLDEEPDQLRSPLQQWSIIGTVKYIDSAH 239
Query: 681 FYVPKGNAAIEIVSVSAGIQTATTMLTEGSAYNLDFTLGDAKDACEGMFVVRVQAGSLVQ 740
+ VP+G AAIEIVS L++GS Y L+FT+GDA D+C G ++ Q G Q
Sbjct: 240 YSVPEGKAAIEIVSNDPSGILTILKLSKGSNYTLEFTMGDANDSCIGDLKLQAQVGRTTQ 299
Query: 741 NFTVQSLGTGSVIKHSVTFKAGSGSTPISFISYNINQTKDGVFCGPLIDDVVLR----AS 796
NFT+QS G GS HS+ FKA S + +SF+S N Q D + CGP++D+V+LR +S
Sbjct: 300 NFTLQSQGMGSTQNHSINFKADSNLSTLSFVSLNQGQRSDAILCGPVVDNVILRSVSWSS 359
Query: 797 HGFKLQLRLEILIYALVLVAIL 818
+ +L +IL+ LV+VAIL
Sbjct: 360 NASPKKLHSKILL-VLVIVAIL 380
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 256/412 (62%), Gaps = 17/412 (4%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +C +M +L+QIH QM+ + I D AS+LLAFCA +SG L+YA +F+ I PN
Sbjct: 24 LLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNT 83
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
FMWNT+IR ++S P++A+ LY +M N +TF F+LKACS++ +L +QIH H
Sbjct: 84 FMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAH 143
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ K G +++ N L+ YS S D+ +AR +FD++ R EA
Sbjct: 144 IIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRD-----------------TEA 186
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L LF +M G + ++V L S L ACA G L+ G+ +H ++K E+ ILG L+ M
Sbjct: 187 LNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDM 246
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G L +A +F M E+ ++ W AMISG A HG EAL+ F K++ + PN +TF
Sbjct: 247 YAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTF 306
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
G+L+AC HAG + + +F SM+R++G +P IEHYGCMVDLLGR G + EAEELI+ M
Sbjct: 307 TGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMP 366
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
KP+ +WGALL AC HGN+E+ +++ K +I ++P + G Y+ L++++A A
Sbjct: 367 VKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAA 418
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 187/462 (40%), Positives = 271/462 (58%), Gaps = 32/462 (6%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S L+ L P L LL + C + LK IHA M+ + D FAASRL+AFC S++ L
Sbjct: 9 SILKTLRLKNPKLVLL-ECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLL 67
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
YA R+ + IQ+PN F++N LIR ++S NP+ + Y+ R G P+ T F++KAC
Sbjct: 68 HYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKAC 127
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN------------------ 167
+ + + Q H K G + D +V N LV Y+ D+N
Sbjct: 128 AQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWT 187
Query: 168 -------------NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
+AR++FD + R L W+TMISGYA++ +A+ F+ + EG
Sbjct: 188 CMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVA 247
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
N + V+S+CA G L +GEK H +V + ILGTA+V MY + G + KA +F
Sbjct: 248 NETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVF 307
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
+ +PE+++ W A+I+GLA HG+AE+AL F ++ K+ VP DITF VL+AC HAG ++
Sbjct: 308 EQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVE 367
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G +IF SMKR +G+EP++EHYGCMVDLLGR GK+ +AE+ + +M KP+ +W ALL A
Sbjct: 368 RGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGA 427
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
C+ H N+EV ERV K ++ ++P G YV+LSN+YA A K
Sbjct: 428 CRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWK 469
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 185/482 (38%), Positives = 273/482 (56%), Gaps = 62/482 (12%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL +KCKS+ QLKQI +QM+++ I+D FA+SRL+AFCA+S DL Y T + +
Sbjct: 52 PFLSLL-EKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNT 110
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMN-MRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
++PN F WN IR S NP +A+ LY ++ G P+ +T+ + KAC+ + +
Sbjct: 111 RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 170
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE------------------- 175
+I HV G D D+ V N ++ DL+ AR++FD+
Sbjct: 171 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYCGN 230
Query: 176 ----------IRNRTLNVWTTMISGYAQSF------------------------------ 195
+ N+T+ WTTM+ GYAQS
Sbjct: 231 LESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHA 290
Query: 196 -RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
R EAL LF++M P+ VT+ S LSAC+Q G L++G +H +++ + LG
Sbjct: 291 NRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALG 350
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
TAL+ MY K G + KA +F +P RN TW A+ISGLA HG+A A+ F ++ ++
Sbjct: 351 TALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVM 410
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+++TF+G+LSACCH G ++ GR+ F M + + PK++HY CMVDLLGR G + EAEE
Sbjct: 411 PDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEE 470
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
LIK M + D V+WGAL AC+ HGN+ + ER +++ ++P++ G+YV+L+NMY EAE
Sbjct: 471 LIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEM 530
Query: 435 MK 436
K
Sbjct: 531 WK 532
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/462 (42%), Positives = 271/462 (58%), Gaps = 49/462 (10%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
PP S CK+M LKQ+HAQMI +++I+D AA+ LL F A+S DL YA ++F S+
Sbjct: 14 PPSSFFP--CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSM 71
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCC 134
PN F +NTLIRA + S +P A+ +++ M PN TF V KAC L
Sbjct: 72 HRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREG 131
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCY------------------------------SVSS 164
+Q+H K GLD D VV+ +VR Y V
Sbjct: 132 RQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDG 191
Query: 165 D----------------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D L AR +FDE+ R++ W MI+GYAQS EA+ +F +M
Sbjct: 192 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 251
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
M PN VTL SVL A ++ G LELG+ VH++ + +LG+AL+ MY K G++
Sbjct: 252 MAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIE 311
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
KA +F+ +P+RN+ TW+ +I+GLA HG A++ LD F +E+ ++P+D+T++G+LSAC
Sbjct: 312 KALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACS 371
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
HAG ++ GR F M RV G+EP+IEHYGCMVDLLGR G + E+EELI M KPD V+W
Sbjct: 372 HAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIW 431
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
ALL ACK HGN+E+ +RV + ++ L P++ G YV LSN+YA
Sbjct: 432 KALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYA 473
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 275/492 (55%), Gaps = 63/492 (12%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRL 71
P PP+ A+ S+ +L Q HA ++ S I FAASRL+A + +S + YA +
Sbjct: 5 FPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSI 64
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F+ I +PN +MWNT+IRA A+S P+ A+ ++ M P+++TFTF LK+C + +
Sbjct: 65 FSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGV 124
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNAR--------------------- 170
+QIH HV K+GL DL + N L+ Y+ + +AR
Sbjct: 125 EEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAY 184
Query: 171 ----------QVFDEIRNRTLNVWTTMIS------------------------------- 189
+FDE+ R + W MIS
Sbjct: 185 AERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMIT 244
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY+ + R +E L+LF+ M G +P++ TL SVLSACA G L GE VH ++ G +
Sbjct: 245 GYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISI 304
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ TALV MY+K G++ KA +F+S ++I+TWN++ISGL++HG + AL +F ++
Sbjct: 305 DGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEML 364
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E PN++TFV VLSAC AG +D GR++F M V+GI+P IEHYGCMVDLLGR G +
Sbjct: 365 VEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLL 424
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EAEEL+++M K V+W +LL AC+NHGN+E+AERV ++++ L P +V LSNMY
Sbjct: 425 EEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMY 484
Query: 430 AEAESMKMQLEI 441
A K +E+
Sbjct: 485 ASMGRWKDVMEV 496
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 262/421 (62%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
+P L L +C + LK I A M+ ++ QD F S+L+ A++ SG ++YA
Sbjct: 2 KPMLDQGSLVAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAH 61
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
R+F+ PN FMWNT+IR + S +P AI LY +M G +PN +TF FVLKAC +
Sbjct: 62 RIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLL 121
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
L +++H+ + K GLD + +VN L++ Y+ ++ A +FDE+ W+TM+S
Sbjct: 122 RLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVS 181
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GYAQ+ +A EAL LF +M E ++ TLASV+ C G L+LG+ VH ++ G ++
Sbjct: 182 GYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKI 241
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+LGTALV MY+K G+L A +F M ER++ W+ MI+G A HGH E+AL LF ++
Sbjct: 242 DVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMK 301
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ + +PN +TF VLSAC H+G ++ G QIF +M Y I P+I+HYGCMVDL R G V
Sbjct: 302 RSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMV 361
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
A + I+ M +P+VV+W LL ACK HG ++ E + ++I+ L+P++ YV++SN+Y
Sbjct: 362 GHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVY 421
Query: 430 A 430
A
Sbjct: 422 A 422
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 257/430 (59%), Gaps = 14/430 (3%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSL+ D+C QLKQIHAQM+ + D F+ASRL+ ALS L YA ++F+ I
Sbjct: 37 PTLSLI-DQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCC 134
PN + WNTLIRA ASS NP +++ +++ M ++ P++ TF F++KA S + L
Sbjct: 96 PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTG 155
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
K H V K L D+ ++N L+ Y+ +L +VF R + W +MI+ + Q
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQG 215
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EAL LF +M + +PN +T+ VLSACA+ E G VH +++ L
Sbjct: 216 GCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLS 275
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMI------------SGLASHGHAEEAL 302
A++ MYTK G++ AK LFD MPE++I +W M+ GLA HGH ++A+
Sbjct: 276 NAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAI 335
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
LF K++++++ PN +TF +L AC H G ++ GR F M+ VYG+ P ++HY CMVD+
Sbjct: 336 ALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDI 395
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G + EA ELI++M P +WGALL AC H N+ +AE+ ++I LEP NHG Y
Sbjct: 396 LGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY 455
Query: 423 VVLSNMYAEA 432
V+LSN+YA+A
Sbjct: 456 VLLSNIYAKA 465
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/421 (44%), Positives = 266/421 (63%), Gaps = 13/421 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMI-----ISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
++LL KC+SM L+QIHA+++ ISS F +++ FCALS GD+ YA +LF
Sbjct: 60 IALLIRKCRSMRVLRQIHARLLTHAMPISS---ISFGLCKIIGFCALSPYGDIDYARKLF 116
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKA-IFLYMNMRRTGFAPNQHTFT--FVLKACSNVR 129
+ IQ PN F WN++IR + S P K + L+ M R G+ PN +TFT FVLKACS V
Sbjct: 117 SQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGY-PNPNTFTMAFVLKACSIVS 175
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+L +Q+H +V KSG V LV Y+ D+ A +VFDEI +R L W+TMIS
Sbjct: 176 ALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMIS 235
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GYA+ NEAL LF M G P+ VT+ SV+SACA SG L+ G+ VH ++ + E
Sbjct: 236 GYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIET 295
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
L TALV+MY K G + +AK +FD+MP ++ W++MI GLA +G AE+AL+ F ++E
Sbjct: 296 DLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRME 355
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ ++ PN +TF+GVLSAC H+G + GR+ + SM +GI P +E YGCMVDLL R V
Sbjct: 356 EAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLV 414
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
+A L++ M P+ V+W LL CK N++ +E V + ++ LEP+N Y++LSN+Y
Sbjct: 415 EDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLY 474
Query: 430 A 430
A
Sbjct: 475 A 475
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/450 (42%), Positives = 265/450 (58%), Gaps = 47/450 (10%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M LKQ+HAQMI +++I+D AA+ LL F A+S DL YA ++F S+ PN F +NTLI
Sbjct: 1 MQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLI 60
Query: 88 RAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
RA + S +P A+ +++ M PN TF V KAC L +Q+H K GL
Sbjct: 61 RALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGL 120
Query: 147 DLDLHVVNCLVRCY------------------------------SVSSD----------- 165
D D VV+ +VR Y V D
Sbjct: 121 DSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGY 180
Query: 166 -----LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLA 220
L AR +FDE+ R++ W MI+GYAQS EA+ +F +M M PN VTL
Sbjct: 181 VRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLV 240
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
SVL A ++ G LELG+ VH++ + +LG+AL+ MY K G++ KA +F+ +P+R
Sbjct: 241 SVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR 300
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
N+ TW+ +I+GLA HG A++ LD F +E+ ++P+D+T++G+LSAC HAG ++ GR F
Sbjct: 301 NVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFF 360
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
M RV G+EP+IEHYGCMVDLLGR G + E+EELI M KPD V+W ALL ACK HGN
Sbjct: 361 DHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGN 420
Query: 401 IEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+E+ +RV + ++ L P++ G YV LSN+YA
Sbjct: 421 VEMGKRVAEHLMELAPHDSGSYVALSNIYA 450
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/440 (40%), Positives = 263/440 (59%), Gaps = 38/440 (8%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ LKQ H MII+ +D+ ++ + C S++G L YA +F PN ++ NT+
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSVFTHQPCPNTYLHNTM 84
Query: 87 IRAQASSLNPDK---AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
IRA + P+ AI +Y + P+ TF FVLK V + +QIH V
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW------------------- 184
G D +HVV L++ Y L +AR++FDE+ + +NVW
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 185 --------------TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
T +ISGYA+S RA+EA+ +F +MLME EP+ VTL +VLSACA G
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LELGE++ +V RG L A++ MY K+G + KA +F+ + ERN+ TW +I+
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
GLA+HGH EAL +F ++ K + PND+TF+ +LSAC H G++D+G+++F SM+ YGI
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P IEHYGCM+DLLGR GK+ EA+E+IK M +K + +WG+LLAA H ++E+ ER + E
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSE 444
Query: 411 IIALEPNNHGVYVVLSNMYA 430
+I LEPNN G Y++L+N+Y+
Sbjct: 445 LIKLEPNNSGNYMLLANLYS 464
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 181/441 (41%), Positives = 265/441 (60%), Gaps = 40/441 (9%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ LKQ H MII+ +D+ ++ + C S++G L YA +F PN ++ NT+
Sbjct: 27 NLKTLKQSHCFMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSVFTHQPFPNTYLHNTM 84
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFA----PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
IRA S ++ A + + + R +A P+ TF FVLK V + +Q+H
Sbjct: 85 IRA-LSLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAV 143
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW------------------ 184
G D +HVV L++ YS L +AR+VFDE+R R +NVW
Sbjct: 144 VFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARG 203
Query: 185 ---------------TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
T +ISGYA+S RA+EA+ +F +MLME +P+ VTL +VLSACA
Sbjct: 204 LLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADL 263
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
G LELGE++ +V RG L A++ MY K+G + KA +F+S+ ERN+ TW +I
Sbjct: 264 GSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTII 323
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
+GLA+HGH EAL +F ++ K + PND+TF+ +LSAC H G++D+G + F SM+ YGI
Sbjct: 324 TGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGI 383
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
P IEHYGCM+DLLGR GK+ EAEE+IK M ++ + +WG+LLAA H +I+V ER +
Sbjct: 384 NPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALY 443
Query: 410 EIIALEPNNHGVYVVLSNMYA 430
++I LEPNN G Y++L+N+Y+
Sbjct: 444 QLIKLEPNNSGNYMLLANLYS 464
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/461 (38%), Positives = 269/461 (58%), Gaps = 39/461 (8%)
Query: 9 RQPP-LPIP------PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSS 61
+ PP +P P P+ CK++ L QIHAQ I + D+F ASR+L+F ALS
Sbjct: 22 QNPPWIPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSP 81
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTF 120
G + YA LF I+ P+ F+ NTLIRA A S NP A+ Y M + P+ HTF
Sbjct: 82 HGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPL 141
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL-------------- 166
+LKACS + SL + IH+HV K G ++ V N LV+ Y+ +
Sbjct: 142 LLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECD 201
Query: 167 -----------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+AR++F+ + +R + W+ MI+GY Q R E L LF M+
Sbjct: 202 GASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMG 261
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
E EPN L + LSACA G +E G+ + +++ + + LGTAL+ MY+K G++ +
Sbjct: 262 EKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVER 321
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A +F M E+N+ W+AMI+GLA +G ++AL+LF ++E + + PN++TF+G+L+AC H
Sbjct: 322 ALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSH 381
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ +D G F SM +YG++P H+ CMVDL GR G + +A+ +IK M +KP+ +WG
Sbjct: 382 SKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWG 441
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
ALL AC+ HG+ E+ E+V K ++ L+PN+ G YV+LSN+YA
Sbjct: 442 ALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYA 482
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 42/228 (18%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G + A +F+ ++ N W+ +I A + A+ L+ M G PN+ TF
Sbjct: 314 SKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFI 373
Query: 120 FVLKACSNVRSLN-CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
+L ACS+ + ++ C H+ S GL + H C+V Y + L+ A+ V +
Sbjct: 374 GILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSM-- 431
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
F+PNS ++L+AC G ELGE+
Sbjct: 432 --------------------------------PFKPNSAIWGALLNACRIHGDTELGEQ- 458
Query: 239 HVFVKMRGFEMGAILGTALV---HMYTKNGALAKAKALFDSMPERNIA 283
V R E+ G V ++Y G + L M ER ++
Sbjct: 459 ---VGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVS 503
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/458 (38%), Positives = 264/458 (57%), Gaps = 35/458 (7%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
SS + LP+ L D C +M +LKQ H+Q+I D+ A R++ FCA+S SGDL
Sbjct: 15 SSAKAHKLPLYGL----DSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDL 70
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+YA +F+ I P+ +++NT+ R IF+Y M +PN+ T+ +++AC
Sbjct: 71 NYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRAC 130
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
++ KQIH HV K G D +N L+ Y L AR+VFD + R + WT
Sbjct: 131 CIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWT 190
Query: 186 TMISGYAQ-------------------------------SFRANEALMLFDQMLMEGFEP 214
++I+GY+Q S R +EA LFD+M +E
Sbjct: 191 SLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVL 250
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
+ AS+LSAC G LE G+ +H +++ G E+ + L T ++ MY K G L KA +F
Sbjct: 251 DKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVF 310
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
+ +P++ I++WN MI GLA HG E A++LF+++E+E + P+ ITFV VLSAC H+G ++
Sbjct: 311 NELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVE 370
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G+ F M V G++P +EH+GCMVDLLGR G + EA +LI M PD + GAL+ A
Sbjct: 371 EGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGA 430
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
C+ HGN E+ E++ K++I LEP+N G YV+L+N+YA A
Sbjct: 431 CRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASA 468
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 251/410 (61%), Gaps = 1/410 (0%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+C+SM L+Q+HA +I + Q+ F +++ FCA+S G + YA R+F I++P+ F+W
Sbjct: 60 QCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGKIENPDGFLW 119
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NT+IR + P+KA Y M+ G + T++F++K C + S KQIH +V K
Sbjct: 120 NTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHCNVLK 179
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL+ + V N LV Y + D+ A +F+E+ L W T+I R EA+ L
Sbjct: 180 HGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIEL 239
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F +ML G +P+ T LSACA G L++G +VH + G + +L+ MY K
Sbjct: 240 FFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSNSLIDMYAK 299
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI-VPNDITFVG 322
G + A +F+ M RNI +WN MI GLA HGH +EAL+LF K+ +E++ PN++TF+G
Sbjct: 300 CGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLG 359
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VL AC H G ++ GR+ F M+R Y I+P I+HYG MVD+LGR G V EA LIK M +
Sbjct: 360 VLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIE 419
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ ++W LLAAC+ HGN+E+AE+V + ++ LEP++ YV+L+NMYA A
Sbjct: 420 SNSIVWRTLLAACRVHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASA 469
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 162/314 (51%), Gaps = 12/314 (3%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS--DLN 167
GF + V K C +++ L +Q+H HV ++GL+ +L V+ ++ +VS ++
Sbjct: 46 GFDSREERVMSVFKQCESMKHL---EQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMD 102
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
A +VF +I N +W TMI G ++ + +A + +M ++G ++ T + ++ C
Sbjct: 103 YALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCG 162
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
Q G LG+++H V G E + LVHMY + A LF+ MP+ + WN
Sbjct: 163 QLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNT 222
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
+I G +EA++LF ++ + + P+D TFV LSAC G +D+GR++ +
Sbjct: 223 IIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHT- 281
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEV 403
G+ + ++D+ +CG V A E+ +M + ++V W ++ HG+ +E+
Sbjct: 282 GLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGR-NIVSWNTMILGLAMHGHGDEALEL 340
Query: 404 AERVVKEIIALEPN 417
++++E +A PN
Sbjct: 341 FSKMLEEKLA-TPN 353
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 187/470 (39%), Positives = 267/470 (56%), Gaps = 54/470 (11%)
Query: 14 PIPPLSLLA--DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P PPL L CK+ LKQ+HA I + +IQD A+ ++ FCA SS D+ YA +
Sbjct: 16 PQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSR-DIDYARAV 74
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNP---DKAIFLYMNMRRTG-FAPNQHTFTFVLKACSN 127
F + PN F WNT++R A + + +A+ L+ M G PN+ TF VLKAC+
Sbjct: 75 FRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACAR 134
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS----------------------- 164
L KQIH + K G D V++ LVR Y + +
Sbjct: 135 ASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQME 194
Query: 165 ------------------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
D+ +A+ +FDE+ R++ W MISGYAQ+ EA
Sbjct: 195 LDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEA 254
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ LF +M +PN VTL SVL A A+ G LELG+ +H++ E+ +LG+ALV M
Sbjct: 255 INLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDM 314
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y+K G++ KA +F+++P+RN TW+A+I A HG AE+A+ F + K + PND+ +
Sbjct: 315 YSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAY 374
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+G+LSAC HAG ++ GR F M +V G++P+IEHYGCMVDLLGR G + EAEELI+ M
Sbjct: 375 IGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMP 434
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+PD V+W ALL ACK H N+++ ERV + ++ L P++ G YV LSN+YA
Sbjct: 435 IEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYA 484
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 186/470 (39%), Positives = 267/470 (56%), Gaps = 54/470 (11%)
Query: 14 PIPPLSLLA--DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P PPL L CK+ LKQ+HA I + +IQD A+ ++ FCA SS D+ YA +
Sbjct: 16 PQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSR-DIDYARAV 74
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNP---DKAIFLYMNMRRTG-FAPNQHTFTFVLKACSN 127
F + PN F WNT++R A + + +A+ L+ M G PN+ TF VLKAC+
Sbjct: 75 FRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACAR 134
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS----------------------- 164
L KQIH + K G D V++ LVR Y + +
Sbjct: 135 ASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQME 194
Query: 165 ------------------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
D+ +A+ +FDE+ R++ W MISGYAQ+ EA
Sbjct: 195 LDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEA 254
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ LF +M +PN VTL SVL A A+ G LELG+ +H++ E+ +LG+ALV M
Sbjct: 255 INLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDM 314
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y+K G++ +A +F+++P+RN TW+A+I A HG AE+A+ F + K + PND+ +
Sbjct: 315 YSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAY 374
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+G+LSAC HAG ++ GR F M +V G++P+IEHYGCMVDLLGR G + EAEELI+ M
Sbjct: 375 IGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMP 434
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+PD V+W ALL ACK H N+++ ERV + ++ L P++ G YV LSN+YA
Sbjct: 435 IEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYA 484
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/421 (43%), Positives = 252/421 (59%), Gaps = 5/421 (1%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL C S+ L QIH+Q+ +S D F ++L+ F +LS S DLSYA + +
Sbjct: 666 PCLSLLK-LCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHS 724
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
P WN LIR A S P A+F+Y NMR G PN TF F+LKAC+ + K
Sbjct: 725 VHPVPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGK 784
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H V K GLD D++V N LV Y + +A +VFDE+ RT+ W +I+ +S
Sbjct: 785 QVHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVVSWNAVITSCVESL 844
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
+ EA+ F +M GFEP+ T+ +L CA+ G L LG +H V RG + LGT
Sbjct: 845 KLGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIERGLVLNYQLGT 904
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV- 314
ALV MY K+GA+ AK +FD M E+N+ TW+AMI GLA HG A+E L+LF + + ++
Sbjct: 905 ALVDMYAKSGAVGYAKLVFDRMKEKNVWTWSAMILGLAQHGFAKEGLELFLDMMRSSLIH 964
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN +TF+GVL AC HAG + G + F M YGI+P + HYG MVD+LGR G + EA
Sbjct: 965 PNYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILGRAGLLKEAYN 1024
Query: 375 LIKRMVWKPDVVMWGALLAACKNH---GNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
I +M ++PD ++W LL+AC H + VA +V K ++ LEP G +V+++NMYA+
Sbjct: 1025 FITKMPFQPDPIVWRTLLSACSIHDVKDSTGVAYKVRKRLLELEPRRSGNFVMVANMYAD 1084
Query: 432 A 432
A
Sbjct: 1085 A 1085
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 255/422 (60%), Gaps = 13/422 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL-----F 72
LSLL C S + L +IHAQ+++S D F + LL ALS S +LSY L F
Sbjct: 34 LSLL-KHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHF 92
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+S P WN +IR +SS +P +AI L+ MRR G PN TF F+LKAC+ + +L
Sbjct: 93 HSATMP----WNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQ 148
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
KQ H K GLDLD++V N L+ Y ++ AR+VFDE+ RTL W +I+
Sbjct: 149 EGKQFHAIAIKCGLDLDVYVRNTLINFYGSCKRMSGARKVFDEMTERTLVSWNAVITACV 208
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
++F +EA+ F +M GFEP+ T+ +LSACA+ G L LG VH V RG +
Sbjct: 209 ENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQ 268
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
LGTA V MY K+G + A+ +F+ + ++++ TW+AMI GLA HG A EA++LF +
Sbjct: 269 LGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGFANEAIELFTNMTSSP 328
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
IVPN +TF+GVL AC HAG +D F M+RVYGI+P + HYG MVD+LGR G+V EA
Sbjct: 329 IVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHYGSMVDVLGRAGQVKEA 388
Query: 373 EELIKRMVWKPDVVMWGALLAACKN---HGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
ELI M +PD ++W LL+AC +G EVAE K ++ LEP G V+++N +
Sbjct: 389 YELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLELEPKRGGNVVMVANKF 448
Query: 430 AE 431
AE
Sbjct: 449 AE 450
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 144/321 (44%), Gaps = 16/321 (4%)
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
++R S+++ I ++ + F +H +LK CS S N +IH + SG
Sbjct: 1 MVRLWISAVHQFFPINVHNYSSKPKFLSTKHQLLSLLKHCS---STNHLFEIHAQILVSG 57
Query: 146 LDLDLHVVNCLVRCYSVSSDLN---NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
L D L+R ++S N +F + W +I GY+ S EA+
Sbjct: 58 LQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHSATMPWNFIIRGYSSSDSPQEAIS 117
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF +M G PN++T +L ACA L+ G++ H G ++ + L++ Y
Sbjct: 118 LFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDLDVYVRNTLINFYG 177
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
++ A+ +FD M ER + +WNA+I+ + +EA+D F K+ P++ T V
Sbjct: 178 SCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVV 237
Query: 323 VLSACCHAGFIDVGR----QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
+LSAC G + +GR Q+ G G+ ++ VD+ + G V A +
Sbjct: 238 ILSACAELGNLSLGRWVHSQVVGR-----GMVLNVQLGTAFVDMYAKSGDVGCARHVFNC 292
Query: 379 MVWKPDVVMWGALLAACKNHG 399
+ K V W A++ HG
Sbjct: 293 LKQK-SVWTWSAMILGLAQHG 312
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/419 (40%), Positives = 258/419 (61%), Gaps = 11/419 (2%)
Query: 25 CKSMHQLK---QIHAQMI---ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
C S+ LK ++HA + + S ++ A R+ C G ++ A R+F+++ +
Sbjct: 139 CASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKC-----GSINEARRIFDNLMNH 193
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ W +I A A S N +A L + M + GF PN T+ +L AC++ +L K++H
Sbjct: 194 DIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH 253
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
H +GL+LD+ V LV+ Y+ S +++AR VFD ++ R + W MI +A+ R +
Sbjct: 254 RHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EA LF QM EG +P+++ S+L+ACA +G LE +K+H G E+ +GTALV
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALV 373
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
HMY+K+G++ A+ +FD M RN+ +WNAMISGLA HG ++AL++FR++ + P+ +
Sbjct: 374 HMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRV 433
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TFV VLSAC HAG +D GR + +M +VYGIEP + H CMVDLLGR G+++EA+ I
Sbjct: 434 TFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDN 493
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKM 437
M PD WGALL +C+ +GN+E+ E V KE + L+P N YV+LSN+YAEA M
Sbjct: 494 MAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDM 552
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 210/405 (51%), Gaps = 6/405 (1%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
K K + KQ+H +I S Q+ + LL G L A +F+++ + W
Sbjct: 40 KQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHV--YIECGRLQEARCVFDALVKKSGASW 97
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N +I + + A+ L+ M G PN T+ +LKAC+++ +L K++H +
Sbjct: 98 NAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRH 157
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL+ D+ V L+R Y +N AR++FD + N + WT MI YAQS EA L
Sbjct: 158 GGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRL 217
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
QM EGF+PN++T S+L+ACA G L+ ++VH G E+ +GTALV MY K
Sbjct: 218 MLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAK 277
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
+G++ A+ +FD M R++ +WN MI A HG EA DLF +++ E P+ I F+ +
Sbjct: 278 SGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSI 337
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L+AC AG ++ ++I G+E + +V + + G + +A + RM +
Sbjct: 338 LNACASAGALEWVKKIHRHALD-SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVR- 395
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+VV W A+++ HG + A V + + A ++P+ VLS
Sbjct: 396 NVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLS 440
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 14/309 (4%)
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
+AI + MN + G + + VLK C + L KQ+H + KS ++ + HV+N L+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
Y L AR VFD + ++ W MI+GY + A +A+ LF +M EG +PN+
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T +L ACA L+ G++VH ++ G E +GTAL+ MY K G++ +A+ +FD++
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
+I +W MI A G+ +EA L ++E+E PN IT+V +L+AC G +
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK--- 247
Query: 338 QIFGSMKRVY------GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+KRV+ G+E + +V + + G + +A + RM + DVV W +
Sbjct: 248 ----WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVM 302
Query: 392 LAACKNHGN 400
+ A HG
Sbjct: 303 IGAFAEHGR 311
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 124/241 (51%), Gaps = 5/241 (2%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
+EA+++ L G +S VL C + L ++VH + E A + L
Sbjct: 10 SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+H+Y + G L +A+ +FD++ +++ A+WNAMI+G H HAE+A+ LFR++ E + PN
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
T++ +L AC + G+++ + R G+E + ++ + G+CG + EA +
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACI-RHGGLESDVRVGTALLRMYGKCGSINEARRIFD 188
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVV--KEIIALEPNNHGVYVVLSNMYAEAESM 435
++ D++ W ++ A GN + A R++ E +PN YV + N A ++
Sbjct: 189 NLM-NHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNA-ITYVSILNACASEGAL 246
Query: 436 K 436
K
Sbjct: 247 K 247
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 256/422 (60%), Gaps = 13/422 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL-----F 72
LSLL + C S + L +IHAQ+++S D F + LL ALS S +LSY L F
Sbjct: 34 LSLL-NHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHF 92
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+S P WN +IR +SS +P +AI L+ MRR G PN TF F+LKAC+ + +L
Sbjct: 93 HSATMP----WNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQ 148
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
KQ H K GLDLD++V N L+ Y ++ AR+VFDE+ RTL W +I+
Sbjct: 149 EGKQFHAIAIKCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSWNAVITACV 208
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
++F +EA+ F +M GFEP+ T+ +LSACA+ G L LG VH V RG +
Sbjct: 209 ENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQVVGRGMVLNVQ 268
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
LGTA V MY K+G + A+ +F+ + ++++ TW+AMI GLA HG A EA++LF +
Sbjct: 269 LGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGFANEAIELFTNMMSSP 328
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
IVPN +TF+GVL AC HAG +D F M+RVYGI+P + HYG MVD+LGR G+V EA
Sbjct: 329 IVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHYGSMVDVLGRAGQVKEA 388
Query: 373 EELIKRMVWKPDVVMWGALLAACKN---HGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
ELI M +PD ++W LL+AC +G EVAE K ++ LEP G V+++N +
Sbjct: 389 YELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLELEPKRGGNVVMVANKF 448
Query: 430 AE 431
AE
Sbjct: 449 AE 450
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 143/321 (44%), Gaps = 16/321 (4%)
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
++R S+++ I ++ + F +H +L CS S N +IH + SG
Sbjct: 1 MVRLWISAVHQFFPINVHNYSSKPKFLSTKHQLLSLLNHCS---STNHLFEIHAQILVSG 57
Query: 146 LDLDLHVVNCLVRCYSVSSDLN---NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
L D L+R ++S N +F + W +I GY+ S EA+
Sbjct: 58 LQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHSATMPWNFIIRGYSSSDSPQEAIS 117
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF +M G PN++T +L ACA L+ G++ H G ++ + L++ Y
Sbjct: 118 LFGEMRRRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDLDVYVRNTLIYFYG 177
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
++ A+ +FD M ER + +WNA+I+ + +EA+D F K+ P++ T V
Sbjct: 178 SCKRMSGARKVFDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVV 237
Query: 323 VLSACCHAGFIDVGR----QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
+LSAC G + +GR Q+ G G+ ++ VD+ + G V A +
Sbjct: 238 ILSACAELGNLSLGRWVHSQVVGR-----GMVLNVQLGTAFVDMYAKSGDVGCARHVFNC 292
Query: 379 MVWKPDVVMWGALLAACKNHG 399
+ K V W A++ HG
Sbjct: 293 LKQK-SVWTWSAMILGLAQHG 312
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/471 (38%), Positives = 274/471 (58%), Gaps = 40/471 (8%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
+P + + L C ++ Q +I +QMI++ I D FAASRLL F S L Y+
Sbjct: 24 KPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSL 83
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
++F+ I++ N FMWNT++RA S + +KA+ LY M + P+ +T+ V++AC+ VR
Sbjct: 84 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VR 142
Query: 130 SLNC-CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD-------------- 174
L K+IH HV K G D D++V N L+ Y+V ++ +AR++FD
Sbjct: 143 LLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 202
Query: 175 --------------------EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
E+ + + W+ +ISGY Q+ EAL++F +M G
Sbjct: 203 AGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRL 262
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT----KNGALAKA 270
+ V + SVLSACA ++ G+ +H V G E L AL+HMY+ K G + A
Sbjct: 263 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENA 322
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F+ M E+ +++WNA+I GLA +G E +LD+F +++ ++PN+ITF+GVL AC H
Sbjct: 323 LEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHM 382
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G +D GR F SM +GIEP ++HYGCMVDLLGR G + EAE+LI+ M PDV WGA
Sbjct: 383 GLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGA 442
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
LL ACK HG+ E+ ERV +++I L+P++ G +V+LSN++A + LE+
Sbjct: 443 LLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEV 493
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 176/478 (36%), Positives = 266/478 (55%), Gaps = 50/478 (10%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS 60
+S+ CS P PPLSL + CKSM+ LKQIH++ I + I + +++L+FC
Sbjct: 2 ISMACSQ-SSPVTENPPLSLF-ETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSR 59
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
GD+ YA +LF++I P+ F WN + + + P + LY+ M P+ +T+ F
Sbjct: 60 EFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPF 119
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD------ 174
+ K + +L +++H HV K GLD ++ N L+ YS+ ++ AR +FD
Sbjct: 120 LFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSD 179
Query: 175 ------------------------------------------EIRNRTLNVWTTMISGYA 192
++ R WT MI GY
Sbjct: 180 VVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYL 239
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ EALMLF +M +P+ T+ SVL+ACAQ G LELGE + ++ +
Sbjct: 240 RLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTF 299
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+G AL+ MY K G + A ++F+++P+R+ TW AM+ GLA +G EEAL++F ++ K
Sbjct: 300 VGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKAS 359
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ P+++T+VGVLSAC H G +D G++ F SM +GIEP I HYGCMVDLLG+ G + EA
Sbjct: 360 VTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEA 419
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
E+IK M KP+ ++WGALL AC+ H + E+AER +++I+ LEPNN VYV+ N+YA
Sbjct: 420 HEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYA 477
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 176/419 (42%), Positives = 258/419 (61%), Gaps = 12/419 (2%)
Query: 18 LSLLADKCK-SMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYAT--RLFN 73
L LL +C S+H LKQ HA ++ + +QD + A L+ ++ +S++ LS+ + R+F+
Sbjct: 57 LHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFD 116
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
++ PN F+WN +I+ + P KAI LY M F PN++T+ VLKACS+ +
Sbjct: 117 FVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAE 176
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
Q+H H+ K GL D H+++ +R Y+ L AR++ D ++ V +
Sbjct: 177 GVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILD---DKGGEVDAVCMPDRKG 233
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
F EAL +F QM E P L SVLSACA G L+ G +H + K ++ +L
Sbjct: 234 CFM--EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 291
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT+LV MY K G + A +F+ M + +++WNAMI GLA HG AE+A+DLF K++ I
Sbjct: 292 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---I 348
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN+ITFVGVL+AC H G + G IF SM++ YG+EP+IEHYGC+VDLLGR G + EAE
Sbjct: 349 NPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 408
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+++ + +P +WGALL AC+ HGN+E+ ERV K ++ LEP N G Y +LSN+YA+A
Sbjct: 409 KVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKA 467
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 183/411 (44%), Positives = 258/411 (62%), Gaps = 13/411 (3%)
Query: 28 MHQLKQIHAQMI-----ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
M L+QIHA+++ ISS F +++ FCALS GD+ YA +LF+ IQ PN F
Sbjct: 1 MRVLRQIHARLLTHAMPISS---ISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFS 57
Query: 83 WNTLIRAQASSLNPDKA-IFLYMNMRRTGFAPNQHTFT--FVLKACSNVRSLNCCKQIHT 139
WN++IR + S P K + L+ M R G+ PN +TFT FVLKACS V +L +Q+H
Sbjct: 58 WNSMIRGCSQSQTPSKEPVILFRKMVRRGY-PNPNTFTMAFVLKACSIVSALEEGQQVHA 116
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+V KSG V LV Y+ D+ A +VFDEI +R L W+TMISGYA+ NE
Sbjct: 117 NVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNE 176
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL LF M G P+ VT+ SV+SACA SG L+ G+ VH ++ + E L TALV+
Sbjct: 177 ALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVN 236
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G + +AK +FD+MP ++ W++MI GLA +G AE+AL+ F ++E+ ++ PN +T
Sbjct: 237 MYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVT 296
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+GVLSAC H+G + GR+ + SM +GI P +E YGCMVDLL R V +A L++ M
Sbjct: 297 FIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVEDACTLVETM 355
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
P+ V+W LL CK N++ +E V + ++ LEP+N Y++LSN+YA
Sbjct: 356 PISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYA 406
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/443 (37%), Positives = 258/443 (58%), Gaps = 31/443 (6%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L ++C +M +L QIH Q++ I++ S LL A +L+Y +F+SI SPN
Sbjct: 16 LLERCSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNT 75
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+WNT++RA ++S +P+ A+ LY M N +TF F+LKACS + + +QIH H
Sbjct: 76 VIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAH 135
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL------------------- 181
+ K G L+++ N L+R Y++S ++ +A +F+++ R +
Sbjct: 136 IIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMA 195
Query: 182 ----------NV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
NV WTTMI G+ + EAL L QML+ G +P+S+TL+ LSACA
Sbjct: 196 YKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGL 255
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
G LE G+ +H +++ ++ +LG L MY K G + KA +F + ++ + W A+I
Sbjct: 256 GALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAII 315
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
GLA HG EALD F +++K I PN ITF +L+AC HAG + G+ +F SM VY I
Sbjct: 316 GGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNI 375
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+P +EHYGCMVDL+GR G + EA E I+ M KP+ +WGALL AC+ H + E+ + + K
Sbjct: 376 KPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGK 435
Query: 410 EIIALEPNNHGVYVVLSNMYAEA 432
+I L+P++ G Y+ L+++YA A
Sbjct: 436 ILIELDPDHSGRYIHLASIYAAA 458
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 264/409 (64%), Gaps = 3/409 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+ L+Q+HA +I+S + ++L++ + ++G ++YA RLF ++ +P+ F++++L+
Sbjct: 104 LRNLQQVHAHIIVSGLHRSRSLLTKLISL--VCTAGSITYARRLFPTVPNPDSFLFDSLL 161
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ + + Y M +G + +TFT V+KAC+++ +L K+IH+HV G
Sbjct: 162 KVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYG 221
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D++V L+ Y+ +SD+ A++VFD + RT+ W ++ISGY Q+ E++ LF M
Sbjct: 222 SDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM 281
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+ GF+P+S T+ S+LS+C+Q G L+ G +H + GF++ +LGT+L++MYT+ G +
Sbjct: 282 MESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNV 341
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+KA+ +FDSM ERN+ TW AMISG HG+ +A++LF ++ PN+ITFV VLSAC
Sbjct: 342 SKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC 401
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-PDVV 386
H+G ID GR++F SMK YG+ P +EH CMVD+ GR G + +A + IK+ + K P
Sbjct: 402 AHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPA 461
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
+W ++L AC+ H N ++ +V + ++++EP N G YV+LSN+YA A M
Sbjct: 462 VWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRM 510
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 264/409 (64%), Gaps = 3/409 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+ L+Q+HA +I+S + ++L++ + ++G ++YA RLF ++ +P+ F++++L+
Sbjct: 40 LRNLQQVHAHIIVSGLHRSRSLLTKLISL--VCTAGSITYARRLFPTVPNPDSFLFDSLL 97
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ + + Y M +G + +TFT V+KAC+++ +L K+IH+HV G
Sbjct: 98 KVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYG 157
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D++V L+ Y+ +SD+ A++VFD + RT+ W ++ISGY Q+ E++ LF M
Sbjct: 158 SDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLM 217
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+ GF+P+S T+ S+LS+C+Q G L+ G +H + GF++ +LGT+L++MYT+ G +
Sbjct: 218 MESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNV 277
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+KA+ +FDSM ERN+ TW AMISG HG+ +A++LF ++ PN+ITFV VLSAC
Sbjct: 278 SKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC 337
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-PDVV 386
H+G ID GR++F SMK YG+ P +EH CMVD+ GR G + +A + IK+ + K P
Sbjct: 338 AHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPA 397
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
+W ++L AC+ H N ++ +V + ++++EP N G YV+LSN+YA A M
Sbjct: 398 VWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRM 446
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 269/445 (60%), Gaps = 32/445 (7%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG-DLSYATRLFNSIQSP 78
L DKC+++ Q+KQI + +S ++D +AA+++++FCALSS+ LS+A RLF ++
Sbjct: 15 FLLDKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHR 74
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ F+WNT+IRA A P KAI L+ NM + F PN +T++F+ KAC+++ +L H
Sbjct: 75 STFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLYLGLACH 134
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA- 197
K G + V N LV +++ +++AR++FD NR + WT +I+GY ++ +
Sbjct: 135 CQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRAGQVL 194
Query: 198 ------------------------------NEALMLFDQMLMEGFEPNSVTLASVLSACA 227
EAL LF+ ML+ GF PN + ++ACA
Sbjct: 195 IGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINACA 254
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
G L+ G +H ++K ++ ++G AL+ MY K G + A ++F + R++ +
Sbjct: 255 SLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVHVYTC 314
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
+ISGLA+HG + A++LF ++ E +VPN++TFV VL+AC G +D G +IF +M ++Y
Sbjct: 315 LISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIY 374
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
G EP+++HYGC+VDLLGR GK+ EA++L+K M KPD + GALL A + +G++E+ E
Sbjct: 375 GDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEET 434
Query: 408 VKEIIALEPNNHGVYVVLSNMYAEA 432
V+ + L ++ GV+VVLSNMYA A
Sbjct: 435 VESLAQLSLDHSGVHVVLSNMYASA 459
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 171/428 (39%), Positives = 257/428 (60%), Gaps = 8/428 (1%)
Query: 14 PIPPLSLLADKC--------KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
P P S + KC S + +QIHA I + + L F LS +
Sbjct: 31 PESPKSYILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPM 90
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
SYA ++F+ IQ+PN F WNT+IR A S NP A+ LY M + P+ HT+ F+LKA
Sbjct: 91 SYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAI 150
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ + + +++H+ ++G + + V N LV Y+ +A ++F+ + R L W
Sbjct: 151 AKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWN 210
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
++I+GYA + R NEAL LF +M + G EP+ T+ S+LSACA+ G L LG + HV++
Sbjct: 211 SVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKV 270
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G + G AL+ +Y K G++ +A +FD M E+++ +W ++I GLA +G +EAL+LF
Sbjct: 271 GLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELF 330
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
++LE++ ++P++ITFVGVL AC H G +D G F MK YGI PKIEHYGCMVDLLGR
Sbjct: 331 KELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGR 390
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G V +A E I+ M +P+ V+W LL AC HG++ + E +++ LEP + G YV+L
Sbjct: 391 AGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLL 450
Query: 426 SNMYAEAE 433
SN+YA +
Sbjct: 451 SNLYASEQ 458
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/439 (38%), Positives = 258/439 (58%), Gaps = 32/439 (7%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFM 82
+C +LKQIHA+M+ + +QD +A ++ L+FC S+S D L YA +F+ P+ F+
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN +IR + S P++++ LY M + N +TF +LKACSN+ + QIH ++
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-------------------------- 176
K G + D++ VN L+ Y+V+ + A +FD I
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 177 -----RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
+ WTTMISGY Q+ EAL LF +M EP++V+LA+ LSACAQ G
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LE G+ +H ++ M ++LG L+ MY K G + +A +F ++ ++++ W A+ISG
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISG 322
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HGH EA+ F +++K I PN ITF VL+AC + G ++ G+ IF SM+R Y ++P
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
IEHYGC+VDLLGR G + EA+ I+ M KP+ V+WGALL AC+ H NIE+ E + + +
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 442
Query: 412 IALEPNNHGVYVVLSNMYA 430
IA++P + G YV +N++A
Sbjct: 443 IAIDPYHGGRYVHKANIHA 461
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 39/330 (11%)
Query: 5 CSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
CSS P L + + QIHAQ+ D +A + L+ A+ +G+
Sbjct: 108 CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAV--TGN 165
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD--------------------------- 97
A LF+ I P+ WN++I+ + D
Sbjct: 166 FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQA 225
Query: 98 ----KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+A+ L+ M+ + P+ + L AC+ + +L K IH++++K+ + +D V+
Sbjct: 226 DMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMD-SVL 284
Query: 154 NC-LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
C L+ Y+ ++ A +VF I+ +++ WT +ISGYA EA+ F +M G
Sbjct: 285 GCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI 344
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT--ALVHMYTKNGALAKA 270
+PN +T +VL+AC+ +G +E G K+ + R + + + +V + + G L +A
Sbjct: 345 KPNVITFTAVLTACSYTGLVEEG-KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 271 KALFDSMPER-NIATWNAMISGLASHGHAE 299
K MP + N W A++ H + E
Sbjct: 404 KRFIQEMPLKPNAVIWGALLKACRIHKNIE 433
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 182/457 (39%), Positives = 265/457 (57%), Gaps = 42/457 (9%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQ---DHFAASRLLAFCALSSSGDLSYATRLFNS 74
LS L ++CK++ +LK+ H Q++ S + ++ +RLL C+ S G SYAT +F+
Sbjct: 21 LSRLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATNVFHM 80
Query: 75 IQSPNHFMWNTLIRAQASSLNPD-----KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
I++P+ +N +IRA S + D KA+ LY M PN TF F+LK C+
Sbjct: 81 IKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWL 140
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE-------------- 175
+ IHT V K G D++V N L+ Y L+NAR+VFDE
Sbjct: 141 DGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVI 200
Query: 176 --IRN---------------RTLNVWTTMISGYAQSFRANEALMLFDQMLM---EGFEPN 215
+RN R + W ++I+G AQ A E+L LF +M + + +P+
Sbjct: 201 GCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPD 260
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
+T+ASVLSACAQ G ++ G+ VH +++ G E ++GTALV+MY K G + KA +F+
Sbjct: 261 KITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFE 320
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
MPE++ + W MIS A HG +A + F ++EK + PN +TFVG+LSAC H+G ++
Sbjct: 321 EMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVEQ 380
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
GR F MKRVY IEP++ HY CMVD+L R E+E LI+ M KPDV +WGALL C
Sbjct: 381 GRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGGC 440
Query: 396 KNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ HGN+E+ E+VV +I LEP+NH YV ++YA+A
Sbjct: 441 QMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKA 477
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 145/329 (44%), Gaps = 49/329 (14%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVRC-YSVSSDLNNA 169
++T + +++ C N+R L K+ HT + KS D + L C +S + A
Sbjct: 18 RNTLSRLIEQCKNLREL---KKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYA 74
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANE-----ALMLFDQMLMEGFEPNSVTLASVLS 224
VF I+N L + MI Y ++ ALML+ QM + PN +T +L
Sbjct: 75 TNVFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLK 134
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
C Q G+ +H V GF + +L+ +Y G L+ A+ +FD M ++ T
Sbjct: 135 GCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVT 194
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIV------------------------------ 314
WN+M+ G +G + A+DLFRK+ I+
Sbjct: 195 WNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSD 254
Query: 315 ----PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
P+ IT VLSAC G ID G+ + G ++R GIE + +V++ G+CG V
Sbjct: 255 DMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRR-NGIECDVVIGTALVNMYGKCGDVQ 313
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHG 399
+A E+ + M K D W +++ HG
Sbjct: 314 KAFEIFEEMPEK-DASAWTVMISVFALHG 341
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 12/311 (3%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG---FAPNQHTF 118
+G L A LF + N WN++I A + +++ L+ M+ P++ T
Sbjct: 205 NGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITI 264
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
VL AC+ + +++ K +H ++ ++G++ D+ + LV Y D+ A ++F+E+
Sbjct: 265 ASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEMPE 324
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ + WT MIS +A +A F +M G +PN VT +LSACA SG +E G
Sbjct: 325 KDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVEQGRWC 384
Query: 239 H-VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASHG 296
V ++ E +V + ++ +++ L SMP + ++ W A++ G HG
Sbjct: 385 FDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGGCQMHG 444
Query: 297 HAEEALDLFRKLEKEQIVPNDITF-VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
+ E + L + P++ F V AG D ++I MK IE KI
Sbjct: 445 NVELGEKVVHHL--IDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKR-IEKKIP- 500
Query: 356 YGC-MVDLLGR 365
GC M+++ G
Sbjct: 501 -GCSMIEINGE 510
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/438 (39%), Positives = 273/438 (62%), Gaps = 12/438 (2%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS 60
M L+ +R+ P+ L D C ++ +LK+IHA ++ S Q F ++++ C +
Sbjct: 48 MKLRALKIREMEDMFVPI--LKD-CPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVC--N 102
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-----RTGFAPNQ 115
G+ YA LF + PN F++N +IRA + AI +Y M P++
Sbjct: 103 HYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDK 162
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
TF FV+K+C+ + + KQ+H HV K G + V N LV Y L++A +VF+E
Sbjct: 163 FTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEE 222
Query: 176 I--RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
+ R+ T+ WT ++SGYA+ +AL F +M M G EP+ ++L SVL CAQ G LE
Sbjct: 223 MTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALE 282
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG+ +H++ GF + AL+ MY K G++ + + LFD M ER++ +W+ MI GLA
Sbjct: 283 LGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLA 342
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+HG A EA++LF++++K +I P+ ITFVG+L+AC HAG ++ G + F SMKR Y IEP +
Sbjct: 343 NHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGV 402
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGC+V+LLG G++ +A EL+K+M KPD +WG+LL++C++HGN+++A ++ ++
Sbjct: 403 EHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLE 462
Query: 414 LEPNNHGVYVVLSNMYAE 431
LEP + G YV+LSN+YA+
Sbjct: 463 LEPADTGNYVLLSNLYAD 480
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 245/412 (59%), Gaps = 2/412 (0%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L C L QIHA +I +S IQ+HF + + L+ ALS S D+ Y++++F+ I P+
Sbjct: 74 LIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSG 133
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+N +IRA + S +P++ +LY MRR G PN + +FV+K+C + SL QIH
Sbjct: 134 SQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHAR 193
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ + G D ++ L+ YS A +VFDEI W +IS + R +A
Sbjct: 194 ILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDA 253
Query: 201 LMLFD--QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
L +FD Q +GFEP+ VT +L ACA G LE GE+VH +++ G++ L +L+
Sbjct: 254 LRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCNSLI 313
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY++ G L KA ++F M ERN+ +W+AMISG A HG+ EA++ F ++++ + P+D
Sbjct: 314 TMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQ 373
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
T GVLSAC H G +D G F M +V+GIEP I HYGCMVDLLGR G + +A +LI
Sbjct: 374 TLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMS 433
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
MV KPD +W LL AC+ H + + ERV+ +I L+ G YV+L N+Y+
Sbjct: 434 MVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYS 485
>gi|356567046|ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Glycine max]
Length = 505
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 258/422 (61%), Gaps = 9/422 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL + C+SM QL+QI AQ+ +S QD S L+ FC+LS S +L +A + +
Sbjct: 20 LSLL-NSCRSMDQLRQIQAQVHVSGLYQDTRVLSELVYFCSLSPSKNLRHARSFVHHAAT 78
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ WN LIR A+S +P +A +++ MR G PN+ TF F+LK+C+ +L KQ+
Sbjct: 79 PSPISWNILIRGYAASDSPLEAFWVFRKMRERGAMPNKLTFPFLLKSCAVASALFEGKQV 138
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H K GLD D++V N L+ Y + +AR+VF E+ RT+ W ++++ +S
Sbjct: 139 HADAVKCGLDSDVYVGNNLINFYGCCKKIVDARKVFGEMPERTVVSWNSVMTACVESLWL 198
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
+ + F +M GFEP+ ++ +LSACA+ G L LG VH + +RG + LGTAL
Sbjct: 199 GDGIGYFFRMWGCGFEPDETSMVLLLSACAELGYLSLGRWVHSQLVLRGMVLSVQLGTAL 258
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL-----EKEQ 312
V MY K+GAL A+ +F+ M RN+ TW+AMI GLA HG EEAL+LF + +
Sbjct: 259 VDMYGKSGALGYARDVFERMENRNVWTWSAMILGLAQHGFGEEALELFAIMNNNNNDNRD 318
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
I PN +T++GVL AC HAG +D G Q F M+ V+GI+P + HYG MVD+LGR G++ EA
Sbjct: 319 IRPNYVTYLGVLCACSHAGMVDEGYQYFHDMECVHGIKPLMTHYGAMVDVLGRAGRLEEA 378
Query: 373 EELIKRMVWKPDVVMWGALLAAC---KNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
E I+ M +PD V+W LL+AC H + + ERV K+++ EP G V+++NMY
Sbjct: 379 YEFIQSMPIEPDPVVWRTLLSACTVHDVHDHTGIGERVSKKLLLKEPRRGGNLVIVANMY 438
Query: 430 AE 431
AE
Sbjct: 439 AE 440
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/458 (39%), Positives = 256/458 (55%), Gaps = 33/458 (7%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S L PL P + L S +LKQ+HA ++ ++ SR+ + CA +SS
Sbjct: 6 SLLHVSPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSS--F 63
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
SYA +F + + WNT +R+ A +P AI L+ +R +P+ +T +FVLKAC
Sbjct: 64 SYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKAC 123
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD----------- 174
S + + K +H +V K GL ++ + N +V Y++ ++ AR+VFD
Sbjct: 124 SRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183
Query: 175 --------------------EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
E+ R + WT+MI GYAQ ++ EA+ LF +M G P
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLP 243
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
N VT+ +VL ACA G L LG ++H F G+E + L+ MY K G L A +F
Sbjct: 244 NEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIF 303
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
D+M ER + +W+AMI+GLA+HG AE+AL LF K+ + PN +TF+G+L AC H G ++
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
GR+ F SM R YGI P+IEHYGCMVDL R G + EA E I M P+ V+WGALL
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
CK H NI++AE + + L+P N G YVVLSN+YAEA
Sbjct: 424 CKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEA 461
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/413 (41%), Positives = 252/413 (61%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+SLL S H+LKQIHA I ++ + L F +S S +SYA +F I +
Sbjct: 21 ISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN 80
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
PN F WNT+IR A S NP A Y M + P+ HT+ F+LKA S ++ + I
Sbjct: 81 PNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAI 140
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H+ ++G + + V N L+ Y+ D +A +VF+ ++ R L W +MI+G+A + R
Sbjct: 141 HSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRP 200
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
NEAL LF +M +EG EP+ T+ S+LSA A+ G LELG +VHV++ G + + +L
Sbjct: 201 NEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSL 260
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ +Y K GA+ +A+ +F M ERN +W ++I GLA +G EEAL+LF+++E + +VP++
Sbjct: 261 LDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSE 320
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
ITFVGVL AC H G +D G + F MK GI P+IEHYGCMVDLL R G V +A E I+
Sbjct: 321 ITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQ 380
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
M +P+ V+W LL AC HG++ + E ++ LEP + G YV+LSN+YA
Sbjct: 381 NMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYA 433
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/429 (40%), Positives = 267/429 (62%), Gaps = 6/429 (1%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAF-CALSSSGDLSYATRLFNS 74
P +LL + L Q+HA +I+S F ++LL CA +G +SY ++F
Sbjct: 13 PAYNLLLQAGPRLKLLHQVHAHVIVSGYGCSRFLLTKLLNLACA---AGSISYTRQIFLI 69
Query: 75 IQSPNHFMWNTLIRAQASSLNPD-KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+ +P+ F++ +LIR+ + N +++ Y M + AP+ +TFT V+K+C+++ +L
Sbjct: 70 VPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRH 129
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ IH HV +G D++V L+ Y L NAR+VFD++R+R++ W +MISGY Q
Sbjct: 130 GRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQ 189
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ A EA+ LFD+M G EPNS T SVLSACA G LG VH + G ++ +L
Sbjct: 190 NGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVL 249
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT+L++MYT+ G ++KA+ +FDSM ERN+ W AMISG ++G+ +A++LF ++ + +
Sbjct: 250 GTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGL 309
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
+PN ITFV VLSAC HAG ++ GR++F SM+ Y + P++EH+ C+VD+LGR G + EA
Sbjct: 310 LPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAY 369
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
IK + +P +W A+L ACK H N + +V + +A EP N YV+LSN+YA A
Sbjct: 370 NFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAG 429
Query: 434 SMKMQLEIL 442
M Q+E++
Sbjct: 430 RMD-QVEMV 437
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 237/400 (59%), Gaps = 4/400 (1%)
Query: 35 HAQMIIS-SRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+A+++ S S ++D + + L+ L G L A RLF I + WN +I A S
Sbjct: 185 YAELVFSKSSLRDAVSFTALITGYTLR--GCLDDARRLFEEIPVRDAVSWNAMIAGYAQS 242
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
++A+ + M+R APN+ T VL AC+ SL + + + GL +L +V
Sbjct: 243 GRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLV 302
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L+ YS DL+ AR +F+ I + + W MI GY+ EAL LF +M E
Sbjct: 303 NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM-GAILGTALVHMYTKNGALAKAKA 272
PN VT S+L ACA G L+LG+ +H ++ + + L T+L+ MY K G + AK
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F M +++ +WNAMISGLA HGHA AL+LFR++ E P+DITFVGVLSAC HAG
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+++GRQ F SM Y I PK++HYGCM+DLLGR G EAE L+K M KPD +WG+LL
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AC+ HGN+E+ E K + LEP N G YV+LSN+YA A
Sbjct: 543 GACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 247/454 (54%), Gaps = 41/454 (9%)
Query: 11 PPLPI----PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
PP + P L+LL+ CKS LKQIH+Q+I + FA S+L+ FCA+S G+LS
Sbjct: 25 PPYKLLQNHPSLTLLS-TCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLS 83
Query: 67 YATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
YA LF SI+ PN F+WNT+IR + S +P AI Y+ M G PN +TF F+LK+C+
Sbjct: 84 YALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCA 143
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD--------------------- 165
V + KQIH HV K GL+ D V L+ Y+ + +
Sbjct: 144 KVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTA 203
Query: 166 ----------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
L++AR++F+EI R W MI+GYAQS R EAL F +M PN
Sbjct: 204 LITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPN 263
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
T+ +VLSACAQSG LELG V +++ G L AL+ MY+K G L KA+ LF+
Sbjct: 264 ESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFE 323
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
+ E++I +WN MI G + +EAL LFRK+++ + PND+TFV +L AC + G +D+
Sbjct: 324 GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDL 383
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV-MWGALLAA 394
G+ I + + + + ++D+ +CG + A+++ M KP + W A+++
Sbjct: 384 GKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM--KPKSLGSWNAMISG 441
Query: 395 CKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
HG+ +A + +++ EP++ VLS
Sbjct: 442 LAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 180/458 (39%), Positives = 256/458 (55%), Gaps = 33/458 (7%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S L PL P + L S +LKQ+HA ++ ++ SR+ + CA +SS
Sbjct: 6 SLLHVSPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSS--F 63
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
SYA +F + + WNT +R+ A +P AI L+ +R +P+ +T +FVLKAC
Sbjct: 64 SYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKAC 123
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD----------- 174
S + + K +H +V K GL ++ + N +V Y++ ++ AR+VFD
Sbjct: 124 SRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183
Query: 175 --------------------EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
E+ R + WT+MI GYAQ ++ EA+ LF +M G P
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLP 243
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
N VT+ +VL ACA G L LG ++H F G+E + L+ MY K G L A +F
Sbjct: 244 NEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIF 303
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
D+M ER + +W+AMI+GLA+HG AE+AL LF K+ + PN +TF+G+L AC H G ++
Sbjct: 304 DNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
GR+ F SM R YGI P+IEHYGCMVDL R G + EA E I M P+ V+WGALL
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
CK H N+++AE + + L+P N G YVVLSN+YAEA
Sbjct: 424 CKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEA 461
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 187/481 (38%), Positives = 276/481 (57%), Gaps = 44/481 (9%)
Query: 4 KCSSLRQPPLPIPPLSLLA-DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
+C S + PL L L + + CKSM+Q+KQ HA +I + I A++LL SS
Sbjct: 3 RCYSTFKKPLNSNQLQLFSLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSF 62
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQA---SSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
G LSYA +LF+ I P+ F++NT+I+A A +S + IFL M +R +GF PN++TF
Sbjct: 63 GSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSM-VRVSGFLPNRYTFV 121
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV----------------- 162
FV KAC N + +QI H K GL+ +L V N ++R Y+
Sbjct: 122 FVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQ 181
Query: 163 --------------SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
S ++ A+++FDE+ R + WTT+I+GY Q EAL LF +ML
Sbjct: 182 DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEML 241
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G PN TLAS L+ACA L+ G +HV++ +M L +L+ MY K G +
Sbjct: 242 QTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEID 301
Query: 269 KAKALF--DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A +F + + + WNAMI G A HG ++EA+DLF +++ E++ PN +TFV +L+A
Sbjct: 302 FAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNA 361
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H ++ GR F SM YGIEP+IEHYGCMVDLLGR G + EAEE + M PD
Sbjct: 362 CSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDAT 421
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
+WGALL AC+ H +IE +R+ K I L+ ++ G +V+L+N+Y+ EA++++ ++E
Sbjct: 422 IWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIE 481
Query: 441 I 441
+
Sbjct: 482 V 482
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/431 (41%), Positives = 254/431 (58%), Gaps = 38/431 (8%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M+ + D F+AS+++AFCAL SG L YA +FN I +P F N++IR + P
Sbjct: 1 MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
+AI Y M G P++ TF + K+C L KQ+H H +K G D ++ N L+
Sbjct: 61 QAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLM 117
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ---------SFRA----------- 197
YS L +AR+VFD++ N+++ W TMI YAQ FR
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWN 177
Query: 198 ------------NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
EAL LF++M + G + + VT+AS+L AC G LELG+ +HV+++
Sbjct: 178 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE 237
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
E+ LGTALV MY K G++ A +F MPE+++ TW A+I GLA G +AL+LF
Sbjct: 238 KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELF 297
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
+++ ++ P+ ITFVGVL+AC HAG ++ G F SM YGI+P IEHYGCMVD+LGR
Sbjct: 298 HEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGR 357
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G++ EAE+LI+ M PD + LL+AC+ HGN+ VAER +++I L+P N G YV+L
Sbjct: 358 AGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLL 417
Query: 426 SNMYAEAESMK 436
SN+Y+ SMK
Sbjct: 418 SNIYS---SMK 425
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/400 (42%), Positives = 237/400 (59%), Gaps = 4/400 (1%)
Query: 35 HAQMIIS-SRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+A+++ S S ++D + + L+ L G L A RLF I + WN +I A S
Sbjct: 185 YAELVFSKSSLRDAVSFTALITGYTLR--GCLDDARRLFEEIPVRDAVSWNAMIAGYAQS 242
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
++A+ + M+R APN+ T VL AC+ SL + + + GL +L +V
Sbjct: 243 GRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLV 302
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L+ YS DL+ AR +F+ I + + W MI GY+ EAL LF +M E
Sbjct: 303 NALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM-GAILGTALVHMYTKNGALAKAKA 272
PN VT S+L ACA G L+LG+ +H ++ + + L T+L+ MY K G + AK
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F M +++ +WNAMISGLA HGHA AL+LFR++ E P+DITFVGVLSAC HAG
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+++GRQ F SM Y I PK++HYGCM+DLLGR G EAE L+K M KPD +WG+LL
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AC+ HGN+E+ E K + LEP N G YV+LSN+YA A
Sbjct: 543 GACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 247/454 (54%), Gaps = 41/454 (9%)
Query: 11 PPLPI----PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
PP + P L+LL+ CKS LKQIH+Q+I + FA S+L+ FCA+S G+LS
Sbjct: 25 PPYKLLQNHPSLTLLS-TCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLS 83
Query: 67 YATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
YA LF SI+ PN F+WNT+IR + S +P AI Y+ M G PN +TF F+LK+C+
Sbjct: 84 YALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCA 143
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD--------------------- 165
V + KQIH HV K GL+ D V L+ Y+ + +
Sbjct: 144 KVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTA 203
Query: 166 ----------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
L++AR++F+EI R W MI+GYAQS R EAL F +M PN
Sbjct: 204 LITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPN 263
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
T+ +VLSACAQSG LELG V +++ G L AL+ MY+K G L KA+ LF+
Sbjct: 264 ESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFE 323
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
+ E++I +WN MI G + +EAL LFRK+++ + PND+TFV +L AC + G +D+
Sbjct: 324 GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDL 383
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV-MWGALLAA 394
G+ I + + + + ++D+ +CG + A+++ M KP + W A+++
Sbjct: 384 GKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM--KPKSLGSWNAMISG 441
Query: 395 CKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
HG+ +A + +++ EP++ VLS
Sbjct: 442 LAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 272/439 (61%), Gaps = 9/439 (2%)
Query: 9 RQP-PLP-IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAF-CALSSSGDL 65
+QP LP P + L ++ L Q+HA +I+S + ++LL CA +G +
Sbjct: 4 KQPHKLPHSPAYNFLLQAGPRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLACA---AGSI 60
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPD-KAIFLYMNMRRTGFAPNQHTFTFVLKA 124
SY ++F ++ +P+ F++ +LI++ + S N +++ Y M + +P+ +TFT V+K+
Sbjct: 61 SYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKS 120
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+++ +L + +H HV G LD++V LV Y DL NAR+VFD+IR R++ W
Sbjct: 121 CADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAW 180
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+MISGY Q+ A EA+ LFD+M G EP+S T SVLSACA G LG VH ++
Sbjct: 181 NSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVG 240
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G ++ +LGT+L++MY + G ++KA+ +FDSM ERN+ W AMISG ++G+ +A++L
Sbjct: 241 NGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVEL 300
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F ++ + + PN ITFV VLSAC HAG ++ GR++F S++ Y + P +EH C+VD+LG
Sbjct: 301 FHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLG 360
Query: 365 RCGKVLEAEELIKRMVWK-PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
R G + EA IK + + P + A+L ACK H N ++ +V + ++A EP N YV
Sbjct: 361 RAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYV 420
Query: 424 VLSNMYAEAESMKMQLEIL 442
+LSN+YA A M Q+EI+
Sbjct: 421 ILSNIYALAGRMD-QVEIV 438
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/448 (40%), Positives = 262/448 (58%), Gaps = 41/448 (9%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+CK+ LKQIHA I + +I AA+ LL F LS+ ++ YA + F+ I PN F W
Sbjct: 24 RCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSW 83
Query: 84 NTLIRAQASS-------LNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCK 135
NT+IRA A S +N +A+ + +M G PN+ TF VLKAC+ + + K
Sbjct: 84 NTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGK 143
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSS------------------------------- 164
Q+H V K GL D V + LVR Y +
Sbjct: 144 QLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRM 203
Query: 165 -DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
DL +R++FD + N+++ W MISG AQ+ EA+ +F M + PN VTL SVL
Sbjct: 204 GDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVL 263
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNI 282
A ++ G +ELG+ VH+F + E+ +LG+AL+ MY+K G++ KA +F+ + ++N
Sbjct: 264 PAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNP 323
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TW+A+I GLA HG A +ALD F ++++ + P+D+ ++GVLSAC HAG ++ GR I+
Sbjct: 324 ITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYH 383
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M + G+ P+IEHYGCMVDLLGR G + EAE+LI M KPD V+ ALL ACK HGNIE
Sbjct: 384 MVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIE 443
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ ER+ K ++ P++ G YV LSNM+A
Sbjct: 444 MGERIAKILMGWYPHDSGSYVALSNMFA 471
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 258/421 (61%), Gaps = 8/421 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
LA C +M Q K IHA I++ +++A S+L++FCALS+SG LSYA+ +F+ IQ+PN
Sbjct: 10 LAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQNPNL 69
Query: 81 FMWNTLIRAQASSLNPDKAI-FLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F +NTLIRA + S P A+ + + + P+QHTF F++ AC+N + KQIH
Sbjct: 70 FAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGKQIHN 129
Query: 140 HVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V K+G+ D HV LVR Y+ + +AR++FDEI N + W +++GY + A
Sbjct: 130 WVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAP 189
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGTAL 257
EAL F ML+ G EP+ L + L CAQ G L+ G+ +H +V K + E +GTAL
Sbjct: 190 EALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTAL 249
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPN 316
V MY K G + ++ +F+ M +RN+ +W+AMI G A HGH +A+ +++ E + P+
Sbjct: 250 VDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPD 309
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+ +GV+ AC HAG + G+ + +M+ YGI PK EHY CMVDLL R G++ EA +LI
Sbjct: 310 GVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLI 369
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN----HGVYVVLSNMYAEA 432
+RM KP +WGALL+ C+ H N+++AE +E++ + + G YV LSN+Y A
Sbjct: 370 RRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAA 429
Query: 433 E 433
+
Sbjct: 430 Q 430
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 266/457 (58%), Gaps = 32/457 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LS+L C +M L++IHA ++ + + A S +LAFCA S GD++YA +F I
Sbjct: 25 PHLSILEKHCTTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQI 84
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTFVLKACSNVRSLNCC 134
SPN F WNT+IR + S P AI L+++M + P++ T+ V KA + + +
Sbjct: 85 HSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYG 144
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCY-------------------------------SVS 163
Q+H V K GL D + N ++ Y +
Sbjct: 145 AQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKC 204
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
+++ +R++FDE+ R W +MISGY ++ R EAL LF QM E +P+ T+ S+L
Sbjct: 205 GEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLL 264
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
+A A+ G L+ GE +H +++ FE+ I+ +++ MY K G++ +A +F+ P + ++
Sbjct: 265 NASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLS 324
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN MI GLA +G EA+ LF +LE + P+D+TFVGVL+AC ++G +D ++ F M
Sbjct: 325 SWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLM 384
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ Y IEP I+HY CMVD LGR G + EAEELI+ M PD ++W +LL+AC+ HGN+E+
Sbjct: 385 SKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVEL 444
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLE 440
A+R K I+ L+ N+ YV+LSN+YA ++ + +E
Sbjct: 445 AKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAME 481
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/406 (41%), Positives = 249/406 (61%), Gaps = 2/406 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++H ++IH++++ + D + L++ A G + A LFN + + W +
Sbjct: 461 ALHWGREIHSRVVKDGFMFDISVQNALISMYA--RCGSIKDARLLFNKMVRKDIISWTAM 518
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I A S +A+ ++ +M++ G PN+ T+T +L ACS+ +L+ ++IH V ++GL
Sbjct: 519 IGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGL 578
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D HV N LV YS+ + +ARQVFD + R + + MI GYA EAL LFD+
Sbjct: 579 ATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDR 638
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+ EG +P+ VT ++L+ACA SG LE +++H V G+ LG ALV Y K G+
Sbjct: 639 LQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGS 698
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A +FD M +RN+ +WNA+I G A HG ++ L LF +++ E I P+ +TFV +LSA
Sbjct: 699 FSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSA 758
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG ++ GR+ F SM R +GI P IEHYGCMVDLLGR G++ E E LIK M ++ +
Sbjct: 759 CSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTR 818
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL AC+ HGN+ VAER + + L+P+N VYV LS+MYA A
Sbjct: 819 IWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAA 864
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 204/385 (52%), Gaps = 8/385 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H+ ++ + D + L+ A G ++F + + + WNT+I A
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYA--KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
N ++A +Y M+R G PN+ T+ +L AC N +L+ ++IH+ V K G D+
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y+ + +AR +F+++ + + WT MI G A+S EAL +F M G
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG 542
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+PN VT S+L+AC+ L+ G ++H V G A + LV+MY+ G++ A+
Sbjct: 543 LKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDAR 602
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M +R+I +NAMI G A+H +EAL LF +L++E + P+ +T++ +L+AC ++G
Sbjct: 603 QVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ ++I S+ G +V +CG +A + +M+ K +V+ W A+
Sbjct: 663 SLEWAKEIH-SLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMM-KRNVISWNAI 720
Query: 392 LAACKNHGN----IEVAERVVKEII 412
+ C HG +++ ER+ E I
Sbjct: 721 IGGCAQHGRGQDVLQLFERMKMEGI 745
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 219/430 (50%), Gaps = 10/430 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM--WNTLIRA 89
+++H +I + D + + L+ G + A +++N + + WN ++
Sbjct: 161 REVHEHIIQHCTVLDQYTVNALINM--YIQCGSIEEARQVWNKLNHTERTVHSWNAMVVG 218
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
++A+ L M++ G A + T +L +C + +L C ++IH K+ L D
Sbjct: 219 YVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFD 278
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
++V NC++ Y+ ++ AR+VFD++ +++ WT +I GYA + A +F +M
Sbjct: 279 VNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQ 338
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EG PN +T +VL+A + L+ G+ VH + G E +GTALV MY K G+
Sbjct: 339 EGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKD 398
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
+ +F+ + R++ WN MI GLA G+ EEA +++ ++++E ++PN IT+V +L+AC +
Sbjct: 399 CRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVN 458
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ GR+I + + G I ++ + RCG + +A L +MV + D++ W
Sbjct: 459 PTALHWGREIHSRVVKD-GFMFDISVQNALISMYARCGSIKDARLLFNKMV-RKDIISWT 516
Query: 390 ALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVL 447
A++ G A V +++ L+PN Y + N + ++ I QV+
Sbjct: 517 AMIGGLAKSGLGAEALAVFQDMQQAGLKPNR-VTYTSILNACSSPAALDWGRRIHQ-QVI 574
Query: 448 FAGLASAADI 457
AGLA+ A +
Sbjct: 575 EAGLATDAHV 584
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 215/428 (50%), Gaps = 14/428 (3%)
Query: 21 LADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L CKS L ++IH + + + + D A+ +L A G + A +F+ +++
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYA--KCGSIHEAREVFDKMET 307
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
+ W +I A + + A ++ M++ G PN+ T+ VL A S +L K +
Sbjct: 308 KSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTV 367
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H+H+ +G + DL V LV+ Y+ + RQVF+++ NR L W TMI G A+
Sbjct: 368 HSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNW 427
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EA ++ QM EG PN +T +L+AC L G ++H V GF + AL
Sbjct: 428 EEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNAL 487
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ MY + G++ A+ LF+ M ++I +W AMI GLA G EAL +F+ +++ + PN
Sbjct: 488 ISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNR 547
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+T+ +L+AC +D GR+I + G+ +V++ CG V +A ++
Sbjct: 548 VTYTSILNACSSPAALDWGRRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKDARQVFD 606
Query: 378 RMVWKPDVVMWGALLAACKNHG----NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
RM + D+V + A++ H +++ +R+ +E L+P+ Y+ + N A +
Sbjct: 607 RMT-QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEE--GLKPDK-VTYINMLNACANSG 662
Query: 434 SMKMQLEI 441
S++ EI
Sbjct: 663 SLEWAKEI 670
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 177/366 (48%), Gaps = 8/366 (2%)
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
S R FN N +T + + + D+A+ + +++ G N + +LK C
Sbjct: 93 SNGIRYFNGRSKANKLHSHTY-KDERTITGKDRAMDVVQYLQQQGARVNSCDYMKMLKRC 151
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--RTLNV 183
V+ L +++H H+ + LD + VN L+ Y + ARQV++++ + RT++
Sbjct: 152 IEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHS 211
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W M+ GY Q EAL L +M G T +LS+C LE G ++HV
Sbjct: 212 WNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAM 271
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
+ +++MY K G++ +A+ +FD M +++ +W +I G A GH+E A +
Sbjct: 272 KARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFE 331
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
+F+K+++E +VPN IT++ VL+A + G+ + + G E + +V +
Sbjct: 332 IFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNA-GHESDLAVGTALVKMY 390
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGV 421
+CG + ++ +++V D++ W ++ GN E A + ++ + PN
Sbjct: 391 AKCGSYKDCRQVFEKLV-NRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKI-T 448
Query: 422 YVVLSN 427
YV+L N
Sbjct: 449 YVILLN 454
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 266/448 (59%), Gaps = 36/448 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL D+C +M +KQI + + +S + D FAA R+++FCA+S+ GD+S+A LF S+
Sbjct: 17 LSLL-DQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPR 75
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
F+WNT++RA P + LY M TGF PN +TF+F+L+AC+ + L+ +
Sbjct: 76 RTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILL 135
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS--- 194
H + G + V N L+ Y+ + +++AR++FD NR + WT +I+GYA+S
Sbjct: 136 HAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQV 195
Query: 195 ------------------------------FRANEALMLFDQMLMEGFEPNSVTLASVLS 224
FR EAL LF+ M + GF PN + L+
Sbjct: 196 VVARQLFDEMPEKNAVSWSAMITGYAQIGLFR--EALELFNDMQIAGFRPNHGAIVGALT 253
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
ACA G L+ G +H +V + ILGTAL+ MY K G + A +FD M +R++
Sbjct: 254 ACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFA 313
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
+ ++ISGLA+HGH+ A+++F +++ E + PN++TF+ +LSAC G ++ G +IF SM
Sbjct: 314 FTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMT 373
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+YGIEP ++HYGC+VDLLGR G + +A+ +++ M +PD + GALL AC+ HG++E+
Sbjct: 374 NIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELG 433
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ V+ + ++ GV+V+LSNMYA A
Sbjct: 434 KETVECLAERSLDHGGVHVLLSNMYASA 461
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 269/468 (57%), Gaps = 39/468 (8%)
Query: 3 LKCSSLRQP-PLPIPP-----LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAF 56
L+ S R P PL PP LSL + CK++ LKQ+HAQ II+ ++
Sbjct: 50 LQSSMSRTPNPLTNPPSNPQILSLF-NPCKTLRHLKQVHAQ-IITHHNSPFQLSALASLS 107
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
L+YA +F+ +Q+P ++N+LIRA +SS P +A+ LY M ++G P+
Sbjct: 108 ALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHM 167
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN--------- 167
T+ FV+KAC+ +HTHV KSG + D ++V+ L+ Y+ DL
Sbjct: 168 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 227
Query: 168 ----------------------NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+AR VFD + R + W TMI+GYA + NEAL LFD
Sbjct: 228 SARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFD 287
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM G +P T+ S+LSACA G L+ G +H ++ E+ +I+GTALV MY K G
Sbjct: 288 QMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCG 347
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
++ A +F++M +++ WN +I+G+A HG+ +EA LF+++++ + PNDITFV +LS
Sbjct: 348 KISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 407
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC HAG +D G+++ M YGIEPK+EHYGC++DLL R G + EA ELI M +P+
Sbjct: 408 ACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNP 467
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
GALL C+ HGN E+ E V K +I L+P + G Y++LSN+YA A+
Sbjct: 468 SALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAK 515
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 254/443 (57%), Gaps = 31/443 (6%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L ++C ++ +LKQIH Q++ I+ SRLL A +L+YA +F+ I SPN
Sbjct: 17 LLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNT 76
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
MWNT+IRA ++S +P++A+ LY M N +TF F+LKACS + +L QIH
Sbjct: 77 VMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQ 136
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS------ 194
+ K G +++ N L+R Y++S + +A +FD + +R + W TMI GY +
Sbjct: 137 IIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMA 196
Query: 195 ---FRA----------------------NEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
F+A EAL L QML+ G +P+ +TL+ LSACA
Sbjct: 197 YKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGL 256
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
G LE G+ +H ++ ++ +LG AL+ MY K G + KA +F + ++ + TW A+I
Sbjct: 257 GALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAII 316
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
G A HG EALD F +++K I P TF VL+AC H G ++ G+ +F SM Y +
Sbjct: 317 GGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNM 376
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+P +EHYGCMVDLLGR G + EA+E ++ M KP+ +WG+LL AC H ++E+ + + K
Sbjct: 377 KPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGK 436
Query: 410 EIIALEPNNHGVYVVLSNMYAEA 432
+I L+P + G Y+ L++++A A
Sbjct: 437 FLIELDPEHDGRYIHLASIHAAA 459
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 258/421 (61%), Gaps = 8/421 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
LA C +M Q K IHA I++ +++A S+L++FCALS+SG LSYA+ +F+ IQ+PN
Sbjct: 10 LAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQNPNL 69
Query: 81 FMWNTLIRAQASSLNPDKAI-FLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F +NTLIRA + S P A+ + + + P+QHTF F++ AC+N + KQIH
Sbjct: 70 FAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGKQIHN 129
Query: 140 HVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V K+G+ D HV LVR Y+ + +AR++FDEI N + W +++GY + A
Sbjct: 130 WVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLNGYVRRGLAP 189
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGTAL 257
EAL F ML+ G EP+ L + L CAQ G L+ G+ +H +V K + E +GTAL
Sbjct: 190 EALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLEADVFIGTAL 249
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPN 316
V MY K G + ++ +F+ M +RN+ +W+AMI G A HGH +A+ +++ E + P+
Sbjct: 250 VDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLERMQVEDGLRPD 309
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+ +GV+ AC HAG + G+ + +M+ YGI PK EHY CMVDLL R G++ EA +LI
Sbjct: 310 GVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRAGQLDEALKLI 369
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN----HGVYVVLSNMYAEA 432
+RM KP +WGALL+ C+ H N+++AE +E++ + + G YV LSN+Y A
Sbjct: 370 RRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAYVQLSNIYLAA 429
Query: 433 E 433
+
Sbjct: 430 Q 430
>gi|218185745|gb|EEC68172.1| hypothetical protein OsI_36118 [Oryza sativa Indica Group]
Length = 443
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/432 (44%), Positives = 256/432 (59%), Gaps = 54/432 (12%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDH-FAASRLL-AFCALSSSGDLSYATRLFN 73
P LSLLAD+C + L +HA M++S R+ D FAASRLL A ALS G + RL
Sbjct: 19 PNLSLLADRCATPRALAAVHAAMLVSGRLADDAFAASRLLSAHAALSPPGAV---LRLLA 75
Query: 74 SIQ-SPNHFMWNTLIRAQASSLNPDKAIFLY------MNMRRTGFAPNQHTFTFVLKACS 126
S+ +PN FM N +RA ASS +P A+ + ++P +HTFTF+LKA +
Sbjct: 76 SLPCAPNSFMLNITLRALASSPDPASALRFFSLLRRGSGGGGGSYSPGRHTFTFLLKASA 135
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
+ L +Q+H + GL+ D +V N LVR YS++ +
Sbjct: 136 RL-PLRASEQLHALAVRHGLERDAYVANGLVRAYSLA------------------GLGPP 176
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC--LELGEKVHVFVKM 244
G + RA LASVLS+CA+SG LE+G +VH ++
Sbjct: 177 RAQGVRRIARAERG-----------------ALASVLSSCARSGSRGLEMGRRVHELMES 219
Query: 245 RGFE---MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
R +GAILGTALV MY K GA+ +A A+FD MPER ATWNA+I+GLA HGH E A
Sbjct: 220 RLVTAPVVGAILGTALVDMYAKTGAMEEATAVFDRMPERQTATWNALITGLAHHGHGEVA 279
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L F ++ ++ + PN T VGVLSA G +D R++F SM++ + + P I+HYGCMVD
Sbjct: 280 LATFHRMRRDGVPPNGATLVGVLSAYGCTGRLDEARRVFASMEKDFAVAPTIQHYGCMVD 339
Query: 362 LLGRCGKVLEAEELIKRM-VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
LLGR G + EAEE+I+ M D V+WGALL ACKNHG+I+VAER V+E++ L+P NHG
Sbjct: 340 LLGRSGLLTEAEEMIRGMTTCDADTVIWGALLNACKNHGDIDVAERAVQEMLKLDPGNHG 399
Query: 421 VYVVLSNMYAEA 432
VYVVLSNMYAEA
Sbjct: 400 VYVVLSNMYAEA 411
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 170/448 (37%), Positives = 269/448 (60%), Gaps = 38/448 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL ++C++M Q+KQ+H+ +I+S+ D FAA ++++ A+SS+ D+S+A +LF S+
Sbjct: 14 LSLL-EQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPH 72
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
F+WNT+IR A+ LY NM +TGF PN +TF+FVL+AC++ +
Sbjct: 73 RTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPVGLAS-- 130
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS--- 194
H V K G + V+N L+ Y+ S + AR++FD R + WT +I+GY +S
Sbjct: 131 HAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHV 190
Query: 195 ------------------------------FRANEALMLFDQMLMEGFEPNSVTLASVLS 224
FR EAL LF+ + + G PN + L+
Sbjct: 191 EFARELFDQMPERNEVSWSAMITGYVHMGMFR--EALELFNDLQLTGLRPNHAGIVGALT 248
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC+ G L+ G +H +V G E+ +LGTALV MY K G + A ++F+ MP+++
Sbjct: 249 ACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFA 308
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
+ ++ISGLA+HG + +A+ LF +++ E+++PN++TF+ VLSAC G +D G +IF M
Sbjct: 309 FTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMS 368
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
VYGIEP ++HYGCMVDLLGR G + EA+ L++ M +PD + GALL +C+ HG++E+
Sbjct: 369 VVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELG 428
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ V+ ++ ++ GV+V+LSNMYA +
Sbjct: 429 KETVESLVERGLDHGGVHVLLSNMYASS 456
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 260/417 (62%), Gaps = 4/417 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+ L C S+ + KQ HA ++ + + + +S+L++F ALS SGDL+YA +LF +Q+
Sbjct: 14 VDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQN 73
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F+ NT+IR A S NP +A+ LY M G + +T+ FVL AC+ + ++ ++
Sbjct: 74 PDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRF 133
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H V K+G DL V+N L++ Y A VFDE R + W MI+ + +
Sbjct: 134 HCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLS 193
Query: 198 NEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK-MRGFEMGA--IL 253
+A L D+M ++ P+ VT+ S++ ACAQ G LE G+ +H + K + FE+ +L
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVL 253
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
TALV MY K G++ A +F M RN+ TWNA+I GLA HGH E+A+ LF ++E +++
Sbjct: 254 ETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKL 313
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
+P+D+TF+ +L AC HAG +D G +F +MK + IEP++EHYGC+VDLL R KV +A
Sbjct: 314 MPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL 373
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
I+ M K + V+W LL AC++ G+ ++AE++ + +I LEP++ G YV+LSN+YA
Sbjct: 374 AFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYA 430
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 262/444 (59%), Gaps = 34/444 (7%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
+L C SM L++IHAQ+I + +D AASR+LAFC S +GD++YA +F I++PN
Sbjct: 1 MLDKNCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCT-SPAGDINYAYLVFTQIRNPN 59
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNCCKQI 137
F+WNT+IR + S P AI L+++M T P + T+ V KA + + + Q+
Sbjct: 60 LFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQL 119
Query: 138 HTHVSKSGLDLDLHVVNCLVRCY-------------------------------SVSSDL 166
H V K GL+ D + N ++ Y + ++
Sbjct: 120 HGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEI 179
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+ +R++FD++ R W +MISGY + R EA+ LF +M EG +P+ T+ S+L+AC
Sbjct: 180 DKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNAC 239
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A G L GE +H ++ F + +I+ TA++ MY+K G++ KA +F S P++ ++ WN
Sbjct: 240 ACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWN 299
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
++I GLA G EA+ LF KLE + P+ ++F+GVL+AC HAG +D + F M
Sbjct: 300 SLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSET 359
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
Y IEP I+HY CMVD+LGR G + EAEELIK M PD ++WG+LL++C+ +GNIE+A++
Sbjct: 360 YKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQ 419
Query: 407 VVKEIIALEPNNHGVYVVLSNMYA 430
K + L+PN +++LSN+YA
Sbjct: 420 AAKRVNELDPNESSSFILLSNVYA 443
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 243/399 (60%), Gaps = 6/399 (1%)
Query: 41 SSRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNP 96
+ ++ D + ++++ AL +S G + A ++F+ I + WN I A + N
Sbjct: 157 AQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNY 216
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ L+ M +T P++ T VL AC+ S+ +Q+H+ ++ G +L +VN L
Sbjct: 217 KEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNAL 276
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ YS +L A +F + N+ + W T+I GY EAL+LF ML G +PN
Sbjct: 277 IDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPND 336
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
VT+ S+LSACA G +++G +HV++ +++G + L T+L+ MY K G + A+ +F
Sbjct: 337 VTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVF 396
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
DSM R++++WNAMI G A HG A A D+F ++ K I P+DITFVG+LSAC H+G +D
Sbjct: 397 DSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLD 456
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+GR IF SM R Y + PK+EHYGCM+DL G G EAE++I M +PD V+W +LL A
Sbjct: 457 LGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKA 516
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
CK HGN+E+ E + +I +EP N G YV+LSN+YA AE
Sbjct: 517 CKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAE 555
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 264/546 (48%), Gaps = 80/546 (14%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNS 74
P LSLL CK++ L+ IHAQMI + ++A S+LL C LS D L YA +F++
Sbjct: 4 PSLSLL-HXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDT 62
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
IQ P +WNT+ R A S +P A+ LY+ M G PN +TF F+LK+C+ +
Sbjct: 63 IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV---------------------- 172
+Q+H V K G DLDL++ L+ Y + L +A++V
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182
Query: 173 ---------FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
FDEI + + W ISGYA++ EAL LF +M+ P+ T+ +VL
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQSG +ELG +VH ++ GF + AL+ +Y+K G L A LF + +++
Sbjct: 243 SACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVI 302
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN +I G +EAL LF+ + + PND+T + +LSAC H G ID+GR I +
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYI 362
Query: 344 -KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV------W--------------- 381
KR+ G+ ++D+ +CG + A+++ M+ W
Sbjct: 363 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANA 422
Query: 382 -------------KPDVVMWGALLAACKNHGNIEVAERVVKEII---ALEPN--NHGVYV 423
+PD + + LL+AC + G +++ + + + L P ++G +
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMI 482
Query: 424 VL---SNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL---TPNRST 476
L S ++ EAE M +E+ V++ L A + N + ES NL P
Sbjct: 483 DLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPG 542
Query: 477 PFVLLN 482
+VLL+
Sbjct: 543 SYVLLS 548
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/431 (38%), Positives = 253/431 (58%), Gaps = 40/431 (9%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI-QSPNHFMWNTLIRAQASS-LN 95
M++ + D+ SR + C SS G SYA LF SI +P+ +++N +I+A +SS +
Sbjct: 1 MLLRALDTDNLLLSRFIHAC--SSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTH 58
Query: 96 PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC 155
P +IFLY N++ G P+ ++F F LKA + S+ +Q+H+ + GL DLHV+
Sbjct: 59 PKASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTA 118
Query: 156 LVRCYSV-----------------------------------SSDLNNARQVFDEIRNRT 180
V+ YS DL NAR +F+ + R
Sbjct: 119 FVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRN 178
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ WT +I+GYAQ+ R ++A+ LF +M +E EP+ + + L+ACA+ G LELGE +
Sbjct: 179 VISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRH 238
Query: 241 FVKMRGFEMGAI-LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
++ G I L AL+ MY K+G + A +F++M + I TW MI+GLA HG
Sbjct: 239 YIDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGT 298
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL++F ++E+ ++ PNDITF+ +LSAC H G + GR F M YGIEPKIEHYGCM
Sbjct: 299 EALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCM 358
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
+DLLGR G + EA+ L+ +M ++P+ V+WG+LLAAC HG+ E+ E ++ ++ LEP+N
Sbjct: 359 IDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNS 418
Query: 420 GVYVVLSNMYA 430
G Y +LSN+YA
Sbjct: 419 GNYALLSNIYA 429
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/466 (37%), Positives = 261/466 (56%), Gaps = 62/466 (13%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ L Q+HA ++ S QDH+ + LL A + +A ++F+SI +PN F+WN +
Sbjct: 45 SLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIV 104
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I+ + KAI+ Y M PN+ T+ + KACS +++ +QIH HV K G+
Sbjct: 105 IKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGI 163
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQ------------------------------VFDEI 176
D+H+ + ++ Y+ L +AR+ +F ++
Sbjct: 164 GSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQM 223
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF-------------- 212
+ + W MI+G A+ +A LFD+M +++G+
Sbjct: 224 PVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQ 283
Query: 213 -------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
P L+SVL+AC+ G ++ G VH ++K ++ A+LGTAL+ MY K G
Sbjct: 284 QMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCG 343
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L +F+ M ER I TWNAMI GLA HG AE+AL+LF KL++ ++ PN IT VGVL+
Sbjct: 344 RLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLT 403
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC HAGF+D G +IF +M+ YG++P++EHYGCMVDLLGR G EAE+LI M KP+
Sbjct: 404 ACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNA 463
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+WGALL AC+ HGN ++AERV K ++ LEP N G YV+LSN+YA+
Sbjct: 464 AVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAK 509
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 149/297 (50%), Gaps = 19/297 (6%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + K + AQM + + S + L+ G+L A +LF+ + + W
Sbjct: 209 KCGVLEAAKGLFAQMPVKN------IGSWNVMINGLAKGGNLGDARKLFDEMSERDEISW 262
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
++++ S+ +A+ ++ M+R P + + VL ACSN+ +++ + +H ++ +
Sbjct: 263 SSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+ + LD + L+ Y+ L+ +VF+E++ R + W MI G A RA +AL L
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALEL 382
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-----EMGAILGTALV 258
F ++ +PN +TL VL+ACA +G ++ G + +F MR F E+ +V
Sbjct: 383 FSKLQEGRMKPNGITLVGVLTACAHAGFVDKG--LRIFQTMREFYGVDPELEHY--GCMV 438
Query: 259 HMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASHGH---AEEALDLFRKLEKE 311
+ ++G ++A+ L +SMP + N A W A++ HG+ AE + +LE +
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQ 495
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 152/342 (44%), Gaps = 66/342 (19%)
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS--SDLNNARQVFDEIRNRTLNV 183
++ SL Q+H V +SG D +V L++CY+ S+ + A +VF I N + +
Sbjct: 41 KSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFI 100
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH---- 239
W +I G ++ + +A+ + +M+++ PN T ++ AC+ + ++ G ++H
Sbjct: 101 WNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVV 159
Query: 240 -------VFVKMRGFEMGAILG-------------------TALVHMYTKNGALAKAKAL 273
V +K G +M A G ++ Y K G L AK L
Sbjct: 160 KHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGL 219
Query: 274 FDSMPERNIATWNAMISGLA-------------------------------SHGHAEEAL 302
F MP +NI +WN MI+GLA S G +EAL
Sbjct: 220 FAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEAL 279
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
++F+++++E+ P VL+AC + G ID GR + +KR I+ ++D+
Sbjct: 280 EIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR-NSIKLDAVLGTALLDM 338
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+CG++ E+ + M + ++ W A++ HG E A
Sbjct: 339 YAKCGRLDMGWEVFEEMKER-EIFTWNAMIGGLAIHGRAEDA 379
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/443 (38%), Positives = 268/443 (60%), Gaps = 34/443 (7%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
SLL++ C+ L QIH M+ + QD+ S+ + C +S G SYA +F++ P
Sbjct: 29 SLLSN-CRHHLHLYQIHGFMLHRALDQDNLFLSQFIDAC--TSLGLSSYAFSIFSNKTHP 85
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ ++NT I+A + + +P AI+LY +R G P+ ++ VLKA + ++ +QIH
Sbjct: 86 DLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIH 145
Query: 139 THVSKSGLDLDLHVVNCLVRCYS----VSS---------------------------DLN 167
T S LD+D++V L++ YS VS +L
Sbjct: 146 TQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELK 205
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
+AR+VF+E+ R + WTT+I+GYAQ+ R +EA+ LF +M +E EP+ + + +VLSACA
Sbjct: 206 SARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACA 265
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
G LELGE +H +++ G L AL+ MY K+G + +A +F++M ++++ TW+
Sbjct: 266 DLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWST 325
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
+I+ LA HG EA+D+F ++EK ++ PN++TFV +LSAC H G +DVGR F M+ +Y
Sbjct: 326 VIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMY 385
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
IEPKIEHYGCM+DLL R G + EA++L+ M ++ + ++WG+LLAA H + E+A+
Sbjct: 386 KIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLA 445
Query: 408 VKEIIALEPNNHGVYVVLSNMYA 430
+K + LEP N G YV+LSN YA
Sbjct: 446 LKHLAKLEPGNSGNYVLLSNTYA 468
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/484 (36%), Positives = 274/484 (56%), Gaps = 44/484 (9%)
Query: 1 MSLKCSSLRQPPLPIPP-LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCAL 59
M L +P L + L+ +A+ C+SM+ LKQIHA +++ ++L F A+
Sbjct: 1 MQLSVQQQCKPILALASILASIAENCQSMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAV 60
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S SGDL YA RLF+ + PN F +NT+IR A S +P + L+ MR+ P++ TF
Sbjct: 61 SPSGDLPYAQRLFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFN 120
Query: 120 FVLKACSNVRSLNC------CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS--------- 164
F++KA S V ++ C +IH V K G L V N L+ Y+V
Sbjct: 121 FLIKARSRVHKVHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVF 180
Query: 165 ----------------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+L ARQVFD++ + + WT M+SGY+++ + EAL
Sbjct: 181 NETVGVDVVSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALE 240
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF +M G P+ VT+ SV+SAC G +E G VH ++ GF L AL++MY
Sbjct: 241 LFWEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYA 300
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G + +A +F++M +++ TWN+MIS A+HG+AE+A +LF + I P+ ITF+
Sbjct: 301 KCGCVDRAWRVFNNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLA 360
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+L A H G +D G ++F M+R YGIE IEHYGC+VD+LGR G++ EA ELI M
Sbjct: 361 LLIAYTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIP 420
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY------AEAESMK 436
+ ++WGALLAAC+ +G++ + ERVVK+++ L+P+ G Y++L ++Y AEA ++
Sbjct: 421 SNDIVWGALLAACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIR 480
Query: 437 MQLE 440
++
Sbjct: 481 QAMQ 484
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/439 (38%), Positives = 257/439 (58%), Gaps = 32/439 (7%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFM 82
+C +LKQIHA+M+ + IQD +A ++ L+ C S+S D L YA +F+ P+ F+
Sbjct: 52 RCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFL 111
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN +IR + S P++++ LY M N +TF +LKACSN+ +L QIH ++
Sbjct: 112 WNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQIT 171
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI----------------RNRTLNV--- 183
K G + D++ VN L+ Y+ + + A +FD I + +++
Sbjct: 172 KLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALT 231
Query: 184 ------------WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
WTTMISGY Q+ EAL LF +M EP++V+LA+ LSACAQ G
Sbjct: 232 LFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 291
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LE G+ +H ++ M ++LG L+ MY K G + +A +F ++ +++ W A+ISG
Sbjct: 292 LEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISG 351
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HGH EA+ F +++K I PN ITF VL+AC + G ++ G+ IF +M+R Y ++P
Sbjct: 352 YAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKP 411
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
IEHYGC+VDLL R G + EA+ I+ M KP+ V+WGALL AC+ H NIE+ E + + +
Sbjct: 412 TIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 471
Query: 412 IALEPNNHGVYVVLSNMYA 430
IA++P + G YV +N++A
Sbjct: 472 IAIDPYHGGRYVHKANIHA 490
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 41/331 (12%)
Query: 5 CSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
C S P L ++ + QIHAQ+ D +A + L+ + +++G+
Sbjct: 137 CCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLIN--SYAATGN 194
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD--------------------------- 97
A LF+ I P+ WN++I+ A + D
Sbjct: 195 FKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQA 254
Query: 98 ----KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+A+ L+ M+ + P+ + L AC+ + +L K IH++++K+ + +D V+
Sbjct: 255 GMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMD-SVL 313
Query: 154 NC-LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
C L+ Y+ D+ A +VF I+ +++ WT +ISGYA EA+ F +M G
Sbjct: 314 GCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI 373
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKM-RGFEMGAILGT--ALVHMYTKNGALAK 269
+PN +T +VL+AC+ +G +E G+ +F M R + + + +V + ++ G L +
Sbjct: 374 KPNVITFTTVLTACSYTGLVEEGKL--IFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDE 431
Query: 270 AKALFDSMPER-NIATWNAMISGLASHGHAE 299
AK MP + N W A++ H + E
Sbjct: 432 AKRFIQEMPLKPNAVIWGALLKACRIHKNIE 462
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/419 (39%), Positives = 251/419 (59%), Gaps = 12/419 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+C S++Q+KQIHAQ++ ++ ++ F +L+A A S ++ A +FN IQ P+ ++
Sbjct: 26 RCSSLNQVKQIHAQVLKANLHRESFVGQKLIA--AFSLCRQMTLAVNVFNQIQDPDVLLY 83
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NTLIRA + P A ++ M+ +G + T+ F+LKACS + + IH V K
Sbjct: 84 NTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEK 143
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
G LD+ V N L+ Y +L AR++FDE+ R W T++ GY ++ N A L
Sbjct: 144 MGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFEL 203
Query: 204 FDQM----------LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
F++M + G + + T+ S+LSACA SG L LG++VH ++ F+ +
Sbjct: 204 FEKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPV 263
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
AL+ MY K G+L A ++F M +++ +WNA+I GLA HGH E+AL LF +++ E
Sbjct: 264 SNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGF 323
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
VP+ +TFVGVL AC HAGF+D G F +M+R YG+ P++EHYGCMVDLLGR G++ EA
Sbjct: 324 VPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAF 383
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L+ M +P+ ++WG LL AC+ H +AE V ++ E ++ G +LSN+YA A
Sbjct: 384 RLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAA 442
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 268/483 (55%), Gaps = 71/483 (14%)
Query: 18 LSLLADKCK-SMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYAT--RLFN 73
L LL +C S+H LKQ HA ++ + +QD + A L+ ++ +S++ LS+ + R+F+
Sbjct: 36 LHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFD 95
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
++ PN F+WN +I+ + P KAI LY M F PN++T+ VLKACS+ +
Sbjct: 96 FVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAE 155
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE------------------ 175
Q+H H+ K GL D H+++ +R Y+ L AR++ D+
Sbjct: 156 GVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL 215
Query: 176 --------------IRNRTL-NVWTTMISGYAQSFRANEALMLFDQM------------- 207
+ +R++ + W MISG+++ A FD+M
Sbjct: 216 RFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMID 275
Query: 208 -------LMEGFE-----------PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
ME E P L SVLSACA G L+ G +H + K ++
Sbjct: 276 GYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQL 335
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+LGT+LV MY K G + A +F+ M + +++WNAMI GLA HG AE+A+DLF K++
Sbjct: 336 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD 395
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
I PN+ITFVGVL+AC H G + G IF SM++ YG+EP+IEHYGC+VDLLGR G +
Sbjct: 396 ---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLL 452
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EAE+++ + +P +WGALL AC+ HGN+E+ ERV K ++ LEP N G Y +LSN+Y
Sbjct: 453 TEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIY 512
Query: 430 AEA 432
A+A
Sbjct: 513 AKA 515
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 264/445 (59%), Gaps = 40/445 (8%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK++ +LK IHA +I S Q F ++++ C + DL YA+ LF ++ PN +++N
Sbjct: 24 CKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVC--DKTEDLGYASLLFKQVKEPNGYLYN 81
Query: 85 TLIRAQASSLNPDKAIFLYMNMRR-------TGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
+IRA + AI Y M R P++ TF FV+K+CS + N KQ+
Sbjct: 82 AMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQV 141
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD---------------------EI 176
H H+ K G ++ + N L+ Y+ + L +A +VFD ++
Sbjct: 142 HAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQM 201
Query: 177 RN----------RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
R RT+ WT MISGY + +AL +F QM + G EP+ +++ SVL AC
Sbjct: 202 RKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPAC 261
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
AQ G LE+G+ +H++ G + AL+ MY+K G + +A LFD M + ++ +W+
Sbjct: 262 AQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWS 321
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
MI GLA+HG A EA++LF++++K +I PN ITF+G+LSAC HAGF + G F SM +
Sbjct: 322 TMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKD 381
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
Y IEP++EHYGC+VD+LGR G++ +A ++I++M KPD +WG+LL++C+ H N+++A
Sbjct: 382 YHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAII 441
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAE 431
++ + LEP++ G YV+LSN+YA+
Sbjct: 442 AMEHLEELEPDDTGNYVLLSNIYAD 466
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 155/345 (44%), Gaps = 49/345 (14%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
++ F +L+ C N+ L K IH HV K L +V +V + DL A +F
Sbjct: 14 ENFFVPILQNCKNIVEL---KSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFK 70
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM-------EGFEPNSVTLASVLSACA 227
+++ ++ MI + + A++ + +ML P+ T V+ +C+
Sbjct: 71 QVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCS 130
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN----------------------- 264
C LG++VH + G + + AL+ MYTK
Sbjct: 131 GLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNS 190
Query: 265 --------GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
G + KA ALFD MP R I +W AMISG G +AL +FR+++ + P+
Sbjct: 191 IISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPD 250
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+I+ + VL AC G ++VG+ I R G+ K ++++ +CG + +A +L
Sbjct: 251 EISIISVLPACAQLGALEVGKWIHMYCDR-NGLLRKTSICNALMEMYSKCGCIGQAYQLF 309
Query: 377 KRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALEPN 417
+M K DV+ W ++ NHG IE+ +R+ K I EPN
Sbjct: 310 DQMS-KGDVISWSTMIGGLANHGKAREAIELFKRMKKAKI--EPN 351
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/475 (38%), Positives = 264/475 (55%), Gaps = 58/475 (12%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSS--SGDLSYATRLFNSIQSPNH 80
+ C+++ L QIHA I S +++D AA+ +L FCA S DL YA ++FN + N
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC 90
Query: 81 FMWNTLIRAQASSLNPDKA---IFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQ 136
F WNT+IR + S + DKA I L+ M F PN+ TF VLKAC+ + KQ
Sbjct: 91 FSWNTIIRGFSES-DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVS--------------------------------- 163
IH K G D V++ LVR Y +
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 164 ------------SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
D AR +FD++R R++ W TMISGY+ + +A+ +F +M
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN VTL SVL A ++ G LELGE +H++ + G + +LG+AL+ MY+K G + KA
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +P N+ TW+AMI+G A HG A +A+D F K+ + + P+D+ ++ +L+AC H G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ GR+ F M V G+EP+IEHYGCMVDLLGR G + EAEE I M KPD V+W AL
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
L AC+ GN+E+ +RV ++ + P++ G YV LSNMYA E M+++++
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 262/443 (59%), Gaps = 38/443 (8%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C ++ +LK+IHA ++ S Q F ++++ C + + YA LF + PN F++N
Sbjct: 24 CPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVC--NHHAETEYANLLFKRVADPNAFLYN 81
Query: 85 TLIRAQASSLNPDKAIFLYMNMR-----RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+IRA + AI +Y M P++ TF FV+K+C+ + + KQ+H
Sbjct: 82 AMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHG 141
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNA------------------------------ 169
HV K G + V N LV Y L++A
Sbjct: 142 HVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRR 201
Query: 170 -RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
R +F+E++++T+ WT ++SGYA+ +AL F +M M G EP+ ++L SVL ACAQ
Sbjct: 202 ARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQ 261
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G LELG+ +H + GF + AL+ MY K G++ + + LFD M ER++ +W+ M
Sbjct: 262 LGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTM 321
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
I GLA+HG A EA++LF++++K +I PN ITFVG+LSAC HAG ++ G + F SMKR Y
Sbjct: 322 IVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYN 381
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
IEP +EHYGC+V+LLG G++ +A ELIK+M KPD +WG+LL++C++H N+E+A +
Sbjct: 382 IEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAM 441
Query: 409 KEIIALEPNNHGVYVVLSNMYAE 431
+ ++ LEP + G YV+LSN+YA+
Sbjct: 442 EHLLELEPADTGNYVLLSNLYAD 464
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/416 (40%), Positives = 248/416 (59%), Gaps = 5/416 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M LKQIHA++I Q+ F +++ FCA + GD++YA +F I P+ F++NT+I
Sbjct: 1 MKDLKQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMI 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R + +P KA Y M+ G + TF+F+LK C + + + +H K GL+
Sbjct: 61 RGFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLN 120
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ V N LV Y D+ +RQ+F+EI N L W +I + + NEAL +F +M
Sbjct: 121 SHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRM 180
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L G EP+ T +LSAC+ G L+ G VH + G + +L+ MY K GAL
Sbjct: 181 LKFGIEPDEATFVVILSACSALGALDFGRWVHSCISNIGHGCITEVNNSLLDMYAKCGAL 240
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK-LEKEQIVPNDITFVGVLSA 326
+A +F+ M ++N TWN MI GLASHG+A EAL LF LE++ P+DITF+ VLSA
Sbjct: 241 QEAFEIFNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSA 300
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G +D G + F MK+ Y I+P I+HYGCMVD+LGR G V EA LI M + + +
Sbjct: 301 CSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQCNAI 360
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA----ESMKMQ 438
+W LLAAC+ HGN+E+ ++V K+++ LEP++ YV+L+N YA A E+M+++
Sbjct: 361 VWRTLLAACRLHGNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVR 416
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/466 (37%), Positives = 259/466 (55%), Gaps = 62/466 (13%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ L Q+H ++ S QDH+ + LL A + +A ++F+SI +PN F+WN +
Sbjct: 45 SLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIV 104
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I+ + KAI+ Y M PN+ T+ + KACS +++ +QIH HV K G+
Sbjct: 105 IKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGI 163
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQ------------------------------VFDEI 176
D+H+ + + Y+ L +AR+ +F ++
Sbjct: 164 GSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQM 223
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF-------------- 212
+ + W MI+G A+ +A LFD+M +++G+
Sbjct: 224 PVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQ 283
Query: 213 -------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
P L+SVL+AC+ G ++ G VH ++K ++ A+LGTAL+ MY K G
Sbjct: 284 QMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCG 343
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L +F+ M ER I TWNAMI GLA HG AE+AL+LF KL++ ++ PN IT VGVL+
Sbjct: 344 RLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLT 403
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC HAGF+D G +IF +M+ YG++P++EHYGCMVDLLGR G EAE+LI M KP+
Sbjct: 404 ACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNA 463
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+WGALL AC+ HGN ++AERV K ++ LEP N G YV+LSN+YA+
Sbjct: 464 AVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAK 509
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 149/297 (50%), Gaps = 19/297 (6%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + K + AQM + + S + L+ G+L A +LF+ + + W
Sbjct: 209 KCGVLEAAKGLFAQMPVKN------IGSWNVMINGLAKGGNLGDARKLFDEMSERDEISW 262
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
++++ S+ +A+ ++ M+R P + + VL ACSN+ +++ + +H ++ +
Sbjct: 263 SSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+ + LD + L+ Y+ L+ +VF+E++ R + W MI G A RA +AL L
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALEL 382
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-----EMGAILGTALV 258
F ++ +PN +TL VL+ACA +G ++ G + +F MR F E+ +V
Sbjct: 383 FSKLQEGRMKPNGITLVGVLTACAHAGFVDKG--LRIFQTMREFYGVDPELEHY--GCMV 438
Query: 259 HMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASHGH---AEEALDLFRKLEKE 311
+ ++G ++A+ L +SMP + N A W A++ HG+ AE + +LE +
Sbjct: 439 DLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQ 495
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 151/342 (44%), Gaps = 66/342 (19%)
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS--SDLNNARQVFDEIRNRTLNV 183
++ SL Q+H V +SG D +V L++CY+ S+ + A +VF I N + +
Sbjct: 41 KSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFI 100
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH---- 239
W +I G ++ + +A+ + +M+++ PN T ++ AC+ + ++ G ++H
Sbjct: 101 WNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVV 159
Query: 240 -------VFVKMRGFEMGAILG-------------------TALVHMYTKNGALAKAKAL 273
V +K G M A G ++ Y K G L AK L
Sbjct: 160 KHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGL 219
Query: 274 FDSMPERNIATWNAMISGLA-------------------------------SHGHAEEAL 302
F MP +NI +WN MI+GLA S G +EAL
Sbjct: 220 FAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEAL 279
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
++F+++++E+ P VL+AC + G ID GR + +KR I+ ++D+
Sbjct: 280 EIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR-NSIKLDAVLGTALLDM 338
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+CG++ E+ + M + ++ W A++ HG E A
Sbjct: 339 YAKCGRLDMGWEVFEEMKER-EIFTWNAMIGGLAIHGRAEDA 379
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 252/436 (57%), Gaps = 35/436 (8%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI--QSPNHFMWNTLI 87
+L+Q+HAQ+I ++ +R+ CA + S YA ++F + Q P F+WN+ +
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPS--FHYAQQIFECVEKQKPETFVWNSCL 100
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+A A +P AI L+ +R+ P+ T + VL+AC N+ L+ + +H V K G
Sbjct: 101 KALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR 160
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR---TLNV--------------------- 183
+L++ N +V Y+ ++ AR +F+++ R T N+
Sbjct: 161 SNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRM 220
Query: 184 -------WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
WT+MI+GY Q +A EA+ LF +M G + N VT+ +VL+ACA G L+LG
Sbjct: 221 PERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM 280
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++H + GF+ + L+ MY K G L +A +F+ M ER + +W+AMI GLA HG
Sbjct: 281 RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 340
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
AEEAL LF + + I PN +TF+G+L AC H G I GR+ F SM R YGI P+IEHY
Sbjct: 341 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHY 400
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GCMVDLL R G + EA E I M KP+ V+WGALL AC+ H N+E+AE +K ++ L+P
Sbjct: 401 GCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP 460
Query: 417 NNHGVYVVLSNMYAEA 432
N G YVVLSN+YAEA
Sbjct: 461 LNDGYYVVLSNIYAEA 476
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 167/406 (41%), Positives = 256/406 (63%), Gaps = 2/406 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
L+QIHA++II+ + ++LL+F A +++ +SY RLF SI P+ F++++LI
Sbjct: 35 LQQIHARIIITGLGRTRSLITKLLSF-AYAAASPISYTRRLFFSIPKPDTFLFHSLITLT 93
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ P +++ Y M + + +TF+ V+K+ +++ + + + IH HV G LD
Sbjct: 94 SKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDA 153
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
+V LV Y+ S + AR+VFD++ +T+ W +MISGY Q+ EA+ LF M
Sbjct: 154 YVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDL 213
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G +P+S T S+LSACAQ G + LG VH ++ F++ +LGTAL++MY++ G ++KA
Sbjct: 214 GVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKA 273
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ +FDSM E+NI W AMISG HGH +A++LF ++ + PN++TFV VLSAC HA
Sbjct: 274 REVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHA 333
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-PDVVMWG 389
G +D GRQIF +MK+ YG+ P +EH CMVD+LGR G + EA + IK K P +W
Sbjct: 334 GLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWT 393
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
A+L ACK H N ++ V + ++++EP N G YV+LSN+YA A M
Sbjct: 394 AMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRM 439
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 172/467 (36%), Positives = 275/467 (58%), Gaps = 39/467 (8%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS 60
M+ K +L+ + + +L D C ++ +LK+IHA ++ S Q F ++++ C +
Sbjct: 1 MARKLRALKIREMEDMFVPILKD-CPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVC--N 57
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-----RTGFAPNQ 115
G+ YA LF + PN F++N +IRA + AI +Y M P++
Sbjct: 58 HYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDK 117
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA------ 169
TF FV+K+C+ + + KQ+H HV K G + V N LV Y L++A
Sbjct: 118 FTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEE 177
Query: 170 -------------------------RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
R +F+E++++T+ WT ++SGYA+ +AL F
Sbjct: 178 MTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFF 237
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M M G EP+ ++L SVL CAQ G LELG+ +H++ GF + AL+ MY K
Sbjct: 238 RRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKC 297
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ + + LFD M ER++ +W+ MI GLA+HG A EA++LF++++K +I P+ ITFVG+L
Sbjct: 298 GSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLL 357
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
+AC HAG ++ G + F SMKR Y IEP +EHYGC+V+LLG G++ +A EL+K+M KPD
Sbjct: 358 TACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPD 417
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+WG+LL++C++HGN+++A ++ ++ LEP + G YV+LSN+YA+
Sbjct: 418 SPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYAD 464
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 267/456 (58%), Gaps = 32/456 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L++L +C +M L++IHA +I + AASR+L FCA SSSGD++YA LF +I
Sbjct: 26 PCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCA-SSSGDINYAYLLFTTI 84
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
SPN + WNT+IR + S P AI L+++M + P + T+ V KA + + +
Sbjct: 85 PSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYDGA 144
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN----------------- 178
Q+H V K GL+ D + N ++ Y+ S L+ AR+VFDE+ +
Sbjct: 145 QLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCG 204
Query: 179 --------------RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
RT W +MISGY ++ R EAL LF +M E EP+ T+ S+LS
Sbjct: 205 EVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLS 264
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
ACA G L+ GE VH +VK FE+ I+ TA++ MY K G + KA +F++ P R ++
Sbjct: 265 ACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSC 324
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN++I GLA +G+ +A++ F KLE + P+ ++F+GVL+AC + G + R F M
Sbjct: 325 WNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMM 384
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
Y IEP I+HY CMV++LG+ + EAE+LIK M K D ++WG+LL++C+ HGN+E+A
Sbjct: 385 NKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVEIA 444
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLE 440
+R + + L P++ Y+++SN+ A + + +E
Sbjct: 445 KRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAME 480
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 252/436 (57%), Gaps = 35/436 (8%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI--QSPNHFMWNTLI 87
+L+Q+HAQ+I ++ +R+ CA + S YA ++F + Q P F+WN+ +
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPS--FHYAQQIFKCVEKQKPETFVWNSCL 100
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+A A +P AI L+ +R+ P+ T + VL+AC N+ L+ + +H V K G
Sbjct: 101 KALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR 160
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR---TLNV--------------------- 183
+L++ N +V Y+ ++ AR +F+++ R T N+
Sbjct: 161 SNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRM 220
Query: 184 -------WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
WT+MI+GY Q +A EA+ LF +M G + N VT+ +VL+ACA G L+LG
Sbjct: 221 PERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM 280
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++H + GF+ + L+ MY K G L +A +F+ M ER + +W+AMI GLA HG
Sbjct: 281 RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 340
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
AEEAL LF + + I PN +TF+G+L AC H G I GR+ F SM R YGI P+IEHY
Sbjct: 341 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHY 400
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GCMVDLL R G + EA E I M KP+ V+WGALL AC+ H N+E+AE +K ++ L+P
Sbjct: 401 GCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP 460
Query: 417 NNHGVYVVLSNMYAEA 432
N G YVVLSN+YAEA
Sbjct: 461 LNDGYYVVLSNIYAEA 476
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 159/396 (40%), Positives = 242/396 (61%), Gaps = 6/396 (1%)
Query: 43 RIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDK 98
++ D + ++++ AL +S G ++ A +LF+ I + WN +I + N +
Sbjct: 121 KVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKE 180
Query: 99 AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR 158
A+ LY +M +T P++ T V+ AC+ S+ +Q+H+ + G ++ +VN L+
Sbjct: 181 ALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLID 240
Query: 159 CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVT 218
YS ++ A +F + + + W T+I G+ EAL+LF +ML G PN VT
Sbjct: 241 LYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVT 300
Query: 219 LASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+ SVL ACA G +++G +HV++ +++G + L T+L+ MY K G + AK +FDS
Sbjct: 301 MLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDS 360
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
M R++++WNAMI G A HG A A DLF K+ K I P+DITFVG+LSAC H+G +D+G
Sbjct: 361 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLG 420
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
R IF SM + Y I PK+EHYGCM+DLLG CG EA+E+I+ M +PD V+W +LL ACK
Sbjct: 421 RHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACK 480
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
H N+E+ E + +I +EP N G YV+LSN+YA A
Sbjct: 481 MHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATA 516
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 245/510 (48%), Gaps = 79/510 (15%)
Query: 52 RLLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG 110
+L+ F LS D LSYA +F +IQ PN +WNT+ R A + + A+ LY+ M G
Sbjct: 1 QLIEFSVLSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLG 60
Query: 111 FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL---- 166
PN ++F F+LK+C+ ++L +QIH HV K G DLD++V L+ Y+ + L
Sbjct: 61 LLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAH 120
Query: 167 ---------------------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
NNAR++FDEI + + W MISGY ++ E
Sbjct: 121 KVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKE 180
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL L+ M+ +P+ T+ +V+SACAQSG +ELG ++H +++ GF + L+
Sbjct: 181 ALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLID 240
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
+Y+K G + A LF + ++++ +WN +I G +EAL LF+++ + PND+T
Sbjct: 241 LYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVT 300
Query: 320 FVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
+ VL AC H G ID+GR I + KR+ G+ ++D+ +CG + A+++
Sbjct: 301 MLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDS 360
Query: 379 MV------WK----------------------------PDVVMWGALLAACKNHGNIEVA 404
M+ W PD + + LL+AC + G +++
Sbjct: 361 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLG 420
Query: 405 ERVVKEI-----IALEPNNHGVYVVL---SNMYAEAESMKMQLEILLVQVLFAGLASAAD 456
+ + + I + ++G + L ++ EA+ M + + V++ L A
Sbjct: 421 RHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACK 480
Query: 457 ILQNPDF-ESPPTNLT---PNRSTPFVLLN 482
+ N + ES NL P +VLL+
Sbjct: 481 MHNNVELGESYAQNLIKIEPENPGSYVLLS 510
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/480 (37%), Positives = 268/480 (55%), Gaps = 65/480 (13%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQ 76
+SLL + K ++Q+ QIHA +I +S ++F ++LL A SS+ DL YA +F+ I
Sbjct: 7 MSLLQNATK-LNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-NQHTFTFVLKACSNVRSLNCCK 135
SP+ F+WNT+IRA +S NP +++ L+ MR P + ++ + V++AC ++ +
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN----------------- 178
++HT V K GL DL V L+ Y+ D+ AR + DE+ +
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVG 185
Query: 179 --------------RTLNVWTTMISG-------------------------------YAQ 193
R L W TMI G YA+
Sbjct: 186 EINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAK 245
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ ++NEAL LF +M + P+ VT+ SVLSAC G L +G+ +H ++ E+ L
Sbjct: 246 ARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKL 305
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT+LV MY K G + + +F+ M R++ W+AMI GLA+HG E ALD F K+ E I
Sbjct: 306 GTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDI 365
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PND+TF+GVLSAC H G +D G F SM +VY + PKIEHYGC+VD+LGR G++ EA
Sbjct: 366 KPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAM 425
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
ELIK M + PD ++W ALL AC+ + N+E+AE ++ LEP+ G YV+LSN+Y++A+
Sbjct: 426 ELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAK 485
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/464 (37%), Positives = 270/464 (58%), Gaps = 13/464 (2%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M + KQ+HA ++ D F S L+A CAL+ G + YA +F I P+ F +NT+I
Sbjct: 11 MEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTMI 70
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R + + ++A+ LY++M G P++ T+ FVLKACS + ++ Q+H HV K GL+
Sbjct: 71 RGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGLE 130
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D+ V N L+ Y ++ NA VF+ + +++ W+ +I +A NE LML +M
Sbjct: 131 GDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKM 190
Query: 208 LMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
EG TL +VLSAC G +LG+ +H + E+ ++ T+L+ MY K+G
Sbjct: 191 SSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGC 250
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L K +F +M E+N ++ MISGLA HG +EAL +F ++ +E + P+D+ +VGV SA
Sbjct: 251 LEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSA 310
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG ++ G Q F SM+ + IEP ++HYGCMVDLLGR G + EA ELIK M KP+ V
Sbjct: 311 CSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDV 370
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQV 446
+W +LL+ACK H N+E+ + + + L NN G Y+VL+NMYA+A+ ++ ++
Sbjct: 371 IWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWD---DVAKIRT 427
Query: 447 LFAGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGW 490
A +++Q P F +L + + ++ + +IP W
Sbjct: 428 KLA----ERNLVQTPGF-----SLIEAKRKVYKFVSQDKSIPQW 462
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/417 (40%), Positives = 251/417 (60%), Gaps = 2/417 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL +CKSM + KQ+HA ++ D F S L+A CALS G + YA +F+ I+
Sbjct: 35 LSLL-KRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFSQIEE 93
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P F +NT+IR +S++ ++A+ LY+ M G P+ T+ FVLKACS + +L QI
Sbjct: 94 PGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQI 153
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H HV K+GL++D+ V N L+ Y + +A VF+++ +++ W+++I +A
Sbjct: 154 HAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMW 213
Query: 198 NEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+E LML M EG L S LSAC G LG +H + E+ ++ T+
Sbjct: 214 HECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTS 273
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ MY K G+L K +F +M +N ++ MI+GLA HG EA+ +F + +E + P+
Sbjct: 274 LIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPD 333
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
D+ +VGVLSAC HAG ++ G Q F M+ + I+P I+HYGCMVDL+GR G + EA +LI
Sbjct: 334 DVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLI 393
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
K M KP+ V+W +LL+ACK H N+E+ E + I L +N G Y+VL+NMYA A+
Sbjct: 394 KSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAK 450
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/490 (37%), Positives = 269/490 (54%), Gaps = 52/490 (10%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAF--CALSSSGD-----LSYA 68
P L+LL C S LK IH ++ + I D F ASRLLA C S+ L YA
Sbjct: 14 PKLALL-QSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYA 72
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
+F+ IQ+PN F++N LIR ++ P KA Y M ++ P+ TF F++KA + +
Sbjct: 73 YGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEM 132
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS--------------------------- 161
+ +Q H+ + + G D++V N LV Y+
Sbjct: 133 ECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMV 192
Query: 162 ----VSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
+ +AR++FDE+ +R L W+ MI+GYA++ +A+ LF+ M EG N
Sbjct: 193 AGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANET 252
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
+ SV+S+CA G LE GE+ H +V + ILGTALV MY + G + KA +F+ +
Sbjct: 253 VMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEEL 312
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
P+++ +W+++I GLA HGHA +A+ F ++ + P DIT VLSAC H G +D G
Sbjct: 313 PDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGL 372
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
+I+ +MKR YGIEP++EHYGC+VD+LGR GK+ EAE I +M KP+ + GALL ACK
Sbjct: 373 EIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKI 432
Query: 398 HGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADI 457
+ N EVAERV +I ++P + G YV+LSN+YA A + L S DI
Sbjct: 433 YKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQ-------------WEKLESLRDI 479
Query: 458 LQNPDFESPP 467
++ + PP
Sbjct: 480 MKEKLVKKPP 489
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/483 (37%), Positives = 267/483 (55%), Gaps = 71/483 (14%)
Query: 18 LSLLADKCK-SMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYAT--RLFN 73
L LL +C S+H LKQ HA ++ + +QD + A L+ ++ +S++ LS+ + R+F+
Sbjct: 37 LHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFD 96
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
++ PN F+WN +I+ + P KAI LY M PN++T+ VLKACS+ +
Sbjct: 97 FVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAE 156
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE------------------ 175
Q+H H+ K GL D H+++ +R Y+ L AR++ D+
Sbjct: 157 GVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL 216
Query: 176 --------------IRNRTL-NVWTTMISGYAQSFRANEALMLFDQM------------- 207
+ +R++ + W MISG+++ A FD+M
Sbjct: 217 RFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMID 276
Query: 208 -------LMEGFE-----------PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
ME E P L SVLSACA G L+ G +H + K ++
Sbjct: 277 GYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQL 336
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+LGT+LV MY K G + A +F+ M + +++WNAMI GLA HG AE+A+DLF K++
Sbjct: 337 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD 396
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
I PN+ITFVGVL+AC H G + G IF SM++ YG+EP+IEHYGC+VDLLGR G +
Sbjct: 397 ---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLL 453
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EAE+++ + +P +WGALL AC+ HGN+E+ ERV K ++ LEP N G Y +LSN+Y
Sbjct: 454 TEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIY 513
Query: 430 AEA 432
A+A
Sbjct: 514 AKA 516
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/398 (39%), Positives = 241/398 (60%), Gaps = 6/398 (1%)
Query: 41 SSRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNP 96
+ ++ D + ++++ AL +S+G + A ++F+ I + WN LI A + N
Sbjct: 157 ARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNY 216
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ L+ M +T P++ T VL AC+ S+ +Q+H+ + G +L +VN L
Sbjct: 217 KEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNAL 276
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ Y ++ A +F+ + + + W T+I GY EAL+LF +ML G PN
Sbjct: 277 IDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNE 336
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
VT+ S+L ACA G +++G +HV++ +++G + L T+L+ MY K G + A+ +F
Sbjct: 337 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVF 396
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
DSM R++++WNAMI G A HG A A D+F ++ K+ I P+DITFVG+LSAC H+G +D
Sbjct: 397 DSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLD 456
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+GR IF SM Y I PK+EHYGCM+DLLG G EAEE+I M PD V+W +LL A
Sbjct: 457 LGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKA 516
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
CK HGN+E+ E + +I +EP N G YV+LSN+YA A
Sbjct: 517 CKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATA 554
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 271/546 (49%), Gaps = 80/546 (14%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNS 74
P LSLL + CK++ L+ IHA+MI + ++A S+L+ F LS D L+YA +F+S
Sbjct: 4 PSLSLLHN-CKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
IQ PN +WNT+ R A S +P A++LY+ M G PN +TF F+LKAC+ ++
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD-------------------- 174
+QIH HV K G DLDL+V L+ Y + +AR+VFD
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182
Query: 175 -----------EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
EI + + W +ISGYA++ EAL LF +M+ +P+ T+ +VL
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQS +ELG +VH ++ GF + AL+ +Y K G + A LF+ + +++
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVI 302
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN +I G +EAL LF+++ + PN++T + +L AC H G ID+GR I +
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYI 362
Query: 344 -KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV------W--------------- 381
KR+ G+ ++D+ +CG + A+++ M+ W
Sbjct: 363 DKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANP 422
Query: 382 -------------KPDVVMWGALLAACKNHGNIEVAERVVKEI-----IALEPNNHGVYV 423
+PD + + LL+AC + G +++ + + + I + ++G +
Sbjct: 423 AFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMI 482
Query: 424 VL---SNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL---TPNRST 476
L S ++ EAE M +E+ V++ L A + N + ES NL P S
Sbjct: 483 DLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSG 542
Query: 477 PFVLLN 482
+VLL+
Sbjct: 543 SYVLLS 548
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 261/411 (63%), Gaps = 5/411 (1%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFA-ASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
S+ Q Q+HAQ++ S + + L F ALS +GDL+YA + NS+ + N F NT
Sbjct: 5 SLSQAMQLHAQILKSPDPKKQTRNLTPLFTFAALSPAGDLTYAHLILNSLSTQNSFFHNT 64
Query: 86 LIRAQASSLNPDKAIFLYMNM--RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+IRA + + +P +A+ L+++M + T P++ T+ F+LK+C+ ++ KQ+H + K
Sbjct: 65 MIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYK 124
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
SGL+ D +V N L+ YS A +VF ++R+R + WT+MI G+ RA EA+ L
Sbjct: 125 SGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRL 184
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F++M+ +G EPN T+ SVL ACA +G + +G +V ++ R + A + TAL+ MY K
Sbjct: 185 FEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAK 244
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G++ A+ +FD + +++ W AMISGLA+HG EEA+ LF ++E + P++ T V
Sbjct: 245 CGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAV 304
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC +AG+ G F SM YGI+P I+HYGCMVDLL R G + EAEE I++M +P
Sbjct: 305 LSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEP 364
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKE--IIALEPNNHGVYVVLSNMYAEA 432
DVV+W L+ A K HG+I+ +E+++K+ ++ ++ ++ G YV+L N+YA A
Sbjct: 365 DVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASA 415
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 180/472 (38%), Positives = 257/472 (54%), Gaps = 54/472 (11%)
Query: 11 PPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATR 70
P L +P + CKSM +LKQ+HA ++ + + D+ A+ +L A S D+ YA
Sbjct: 15 PRLDVPQIK----ACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALS 70
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNP--DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
+F+ + N F WNT+IRA A + + D + + PNQ TF VLKAC+ +
Sbjct: 71 VFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVM 130
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS------------------------- 163
L KQ+H + K GL D VV L+R Y +
Sbjct: 131 ARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVR 190
Query: 164 ----------------------SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+L AR++FD + R++ W MISGYAQ+ EA+
Sbjct: 191 DERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAI 250
Query: 202 MLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+F +M+ G PN VTL SVL A ++ G LELG+ VH++ + + +LG+ALV M
Sbjct: 251 EIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDM 310
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G++ KA +F+ +P+ N+ TWNA+I GLA HG A + + ++EK I P+D+T+
Sbjct: 311 YAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTY 370
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+ +LSAC HAG +D GR F M G++PKIEHYGCMVDLLGR G + EAEELI M
Sbjct: 371 IAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMP 430
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
KPD V+W ALL A K H NI++ R + ++ + P++ G YV LSNMYA +
Sbjct: 431 MKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASS 482
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 258/407 (63%), Gaps = 3/407 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
K++ KQ+HA++ + A++L+ + +S L+ A LF+ I N F+WN
Sbjct: 15 KAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNS--LTNAHLLFDRISKRNLFLWNV 72
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+IR A + + AI LY MR G P++ TF FVLKACS + ++ K+IH V +SG
Sbjct: 73 MIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSG 132
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
L+ D+ V L+ Y+ + +ARQVFD+I R + W +M++ Y+Q+ + +E+L L
Sbjct: 133 LESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCR 192
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
M G +P T ++A A +G L G+++H + GFE + TAL+ MY K+G
Sbjct: 193 VMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSG 252
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
++ A++LF+ + E+ + +WNAMI+G A HGHA EALDLF+++ K +++P+ ITFVGVL+
Sbjct: 253 SVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLA 311
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H G ++ G+ F SM + I P ++HY CM+DLLG CG++ EA +LI M +PD
Sbjct: 312 ACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDA 371
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL +CK HGN+E+ E +++++ LEP++ G YV+LSNMYA+A
Sbjct: 372 GVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQA 418
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 154/306 (50%), Gaps = 2/306 (0%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ +L++C +++ KQ+H + + G+ + + LV Y + + L NA +FD I
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R L +W MI GYA + A+ L+ QM G P+ T VL AC+ +E G+K
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H V G E +G AL+ MY K G + A+ +FD + ER++ WN+M++ + +G
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+E+L L R + + P + TFV ++A G + G+++ G R +G E +
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWR-HGFESNDKVKT 242
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
++D+ + G V A L + ++ + VV W A++ HG+ A + KE+
Sbjct: 243 ALMDMYAKSGSVNVARSLFE-LLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLP 301
Query: 418 NHGVYV 423
+H +V
Sbjct: 302 DHITFV 307
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 189/426 (44%), Positives = 262/426 (61%), Gaps = 15/426 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMI--ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
L LL D C + +LKQIHAQ I S+ F SR+L +SS D YA R+FN I
Sbjct: 29 LHLLTD-CTDLSKLKQIHAQAIRNFSTHNSSLFLYSRILH---VSSLIDFDYACRVFNQI 84
Query: 76 QSPNHFMWNTLIRAQASSLN-PDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNC 133
+PN FMWNTLI A A SL+ ++AI ++ M G P++HTF F+LKAC+ V +L+
Sbjct: 85 DNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSE 144
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+Q H + K GLDLD++V N L+ Y+ L+ A +VF+++ R+L W MI Y Q
Sbjct: 145 GRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQ 204
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV--KMRGFEMGA 251
S AL LF +M FEP+ T+ S++SACA G L LG H +V K G G
Sbjct: 205 SGLFENALKLFVEM-QNSFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGD 263
Query: 252 IL-GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL-E 309
+L ++LV MY+K G+L A+ +F++MP+ ++ +WN+MI LA HG + AL F +L E
Sbjct: 264 VLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVE 323
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E+ +PN +TFVGVLSAC H G + GR+ F M Y IEP++EHYGC+VDLL R G +
Sbjct: 324 MEKFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFI 383
Query: 370 LEAEELIKRMVWKPDVVMWGALLAAC-KNHGNIEVAERVVKEIIALEPN-NHGVYVVLSN 427
EA EL+ M KPD V+W +LL AC K + +E++E V +I+ E + GVYV+LS
Sbjct: 384 DEALELVANMHIKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSR 443
Query: 428 MYAEAE 433
+YA A
Sbjct: 444 VYASAR 449
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 179/451 (39%), Positives = 253/451 (56%), Gaps = 33/451 (7%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRL-------------------- 53
P L K K+ H+ KQ+HA + ++ + H S +
Sbjct: 130 FPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKST 189
Query: 54 ----LAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
++F AL S G + A RLF+ I + + WN +I S ++A+ +
Sbjct: 190 LRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTR 249
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M+ +PNQ T VL AC ++RSL K I + V G +L +VN LV YS +
Sbjct: 250 MQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGE 309
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ AR++FD + ++ + +W TMI GY EAL+LF+ ML E PN VT +VL A
Sbjct: 310 IGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPA 369
Query: 226 CAQSGCLELGEKVHVFV----KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
CA G L+LG+ VH ++ K G L T+++ MY K G + A+ +F SM R+
Sbjct: 370 CASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRS 429
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+A+WNAMISGLA +GHAE AL LF ++ E P+DITFVGVLSAC AGF+++G + F
Sbjct: 430 LASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFS 489
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM + YGI PK++HYGCM+DLL R GK EA+ L+ M +PD +WG+LL AC+ HG +
Sbjct: 490 SMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQV 549
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
E E V + + LEP N G YV+LSN+YA A
Sbjct: 550 EFGEYVAERLFELEPENSGAYVLLSNIYAGA 580
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 238/458 (51%), Gaps = 44/458 (9%)
Query: 11 PPLPI----PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
PP + P L+LLA KC + LKQIH+ +I S FA S+L+ FCALS S DLS
Sbjct: 18 PPYKLLENHPHLNLLA-KCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLS 76
Query: 67 YATRLFNSI--QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
YA LF+SI Q PN F+WNTLIRA + + P ++ L+ M +G PN HTF + K+
Sbjct: 77 YALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKS 136
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL------------------ 166
C+ ++ + KQ+H H K L L HV L+ YS +L
Sbjct: 137 CAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSF 196
Query: 167 -------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
++AR++FDEI + + W MI+GY QS R EAL F +M
Sbjct: 197 TALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVS 256
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN T+ SVLSAC LELG+ + +V+ RGF L ALV MY+K G + A+ L
Sbjct: 257 PNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKL 316
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
FD M ++++ WN MI G EEAL LF + +E + PND+TF+ VL AC G +
Sbjct: 317 FDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGAL 376
Query: 334 DVGRQIFGSMKRVY---GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
D+G+ + + + G + + ++ + +CG V AE++ + M + + W A
Sbjct: 377 DLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR-SLASWNA 435
Query: 391 LLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
+++ +G+ E A + +E+I +P++ VLS
Sbjct: 436 MISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLS 473
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/416 (38%), Positives = 261/416 (62%), Gaps = 2/416 (0%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNSI 75
PLSLL+ KC S+++LKQI A I ++ D ++L+ FC L+ ++ + +A LF+ I
Sbjct: 32 PLSLLS-KCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQI 90
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
+ ++N + R A S +P A L+ + +G P+ +TF+ +LKAC++ ++L
Sbjct: 91 LDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGM 150
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+H K GL+ ++++ L+ Y+ +D+N AR VFDE+ + + +I+GYA+S
Sbjct: 151 GLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSS 210
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
+ NEAL LF ++ EP VT+ SV+ +CA G L+LG+ +H +VK +GF+ + T
Sbjct: 211 QPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNT 270
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
AL+ M+ K G+L A ++F+ M R+ W+AMI A+HG +A+ +F ++++E + P
Sbjct: 271 ALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRP 330
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
++ITF+G+L AC HAG ++ GR F SM + YGI P I+HYGCMVDLLGR G + EA
Sbjct: 331 DEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNF 390
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+ ++ K ++W LL+AC HGN+E+A+RV++ I L+ + G YV+LSN+YA
Sbjct: 391 VDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYAR 446
>gi|224141397|ref|XP_002324059.1| predicted protein [Populus trichocarpa]
gi|222867061|gb|EEF04192.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 249/410 (60%), Gaps = 11/410 (2%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA-TRLFNSIQS--PNHFMWNTL 86
+ QIHAQ+++S QD + L+ FC+LS S LSYA + L+NS+ S P WN L
Sbjct: 35 HVSQIHAQILVSGLQQDTNLLTELIRFCSLSPSKHLSYAHSLLYNSLDSLPP----WNFL 90
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
IR AS P AI ++ MR+ G PN TF FVLKAC+ +L KQ+H + K GL
Sbjct: 91 IRGYASGDAPKNAIRVFHRMRKEGVGPNNFTFPFVLKACATCLALEEGKQVHADIFKFGL 150
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D D++V N LV Y + +A +VFDE+ R++ W ++I+ Q+ +A+ F +
Sbjct: 151 DCDVYVNNNLVHLYGSCKRIWDACKVFDEMPVRSIVSWNSVITACVQNLWLGDAIWNFVK 210
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M GFEPN T+ +LS CAQ G L LG +H V RG + LGTALV MY K+G
Sbjct: 211 MKDFGFEPNETTMVIMLSLCAQIGNLSLGRWIHSQVIERGMTLNCQLGTALVDMYAKSGD 270
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIVPNDITFVGVLS 325
L AK +FD M ++N+ TW+AMI GLA HG +E L+LF K+ E I PN +TF+GVL
Sbjct: 271 LGYAKLVFDRMEKKNVWTWSAMILGLAQHGFGKEGLELFLKMKESVSICPNYVTFLGVLC 330
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC HAG +D G + F M+ +GI P + HYG MVD+LGR G + EA + + ++PD
Sbjct: 331 ACSHAGLVDEGFRYFYEMEHRHGIRPMVIHYGAMVDILGRAGNLEEAYNFLMDVPFQPDP 390
Query: 386 VMWGALLAACKNH-GNIE--VAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
++W LL+AC H N+ + ++V K+++ LEP +V+++NMYA+A
Sbjct: 391 ILWRTLLSACNIHNANVSDGLVDKVRKKLLELEPRRSENFVIIANMYADA 440
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 163/438 (37%), Positives = 258/438 (58%), Gaps = 35/438 (7%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M +KQI + + +S + D FAA R+++FCA+S+ GD+S+A LF S+ F+WNT++
Sbjct: 1 MAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTML 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
RA P + LY M TGF PN +TF+F+L+AC+ + L+ +H + G +
Sbjct: 61 RAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWE 120
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS------------- 194
V N L+ Y+ + +++AR++FD NR + WT +I+GYA+S
Sbjct: 121 AYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEM 180
Query: 195 --------------------FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
FR EAL LF+ M + GF PN + L+ACA G L+
Sbjct: 181 PEKNAVSWSAMITGYAQIGLFR--EALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQ 238
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G +H +V + ILGTAL+ MY K G + A +FD M +R++ + ++ISGLA+
Sbjct: 239 GRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLAN 298
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HGH+ A+++F +++ E + PN++TF+ +LSAC G ++ G +IF SM +YGIEP ++
Sbjct: 299 HGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQ 358
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGC+VDLLGR G + +A+ +++ M +PD + GALL AC+ HG++E+ + V+ +
Sbjct: 359 HYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAER 418
Query: 415 EPNNHGVYVVLSNMYAEA 432
++ GV+V+LSNMYA A
Sbjct: 419 SLDHGGVHVLLSNMYASA 436
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 248/444 (55%), Gaps = 37/444 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L++L DK K++ L QIHA ++ DH + +S G L Y+ LF Q+
Sbjct: 33 LAVLIDKSKTISHLLQIHA--VLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQN 90
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F W +I A ++A+ Y M G PN TF+ +LK C + K +
Sbjct: 91 PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKAL 146
Query: 138 HTHVSKSGLDLDLHV-------------------------------VNCLVRCYSVSSDL 166
H+ K G D DL+V + ++ CY+ +L
Sbjct: 147 HSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGEL 206
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+ AR +FD + R W MI GY Q+ NEAL+LF +ML +PN VT+ SVLSAC
Sbjct: 207 DAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSAC 266
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
Q G LE G VH +++ G + +GTALV MY+K G+L A+ +FD + ++++ WN
Sbjct: 267 GQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWN 326
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+MI G A HG ++EAL LF+ + + + P +ITF+G+LSAC H+G++ G IF MK
Sbjct: 327 SMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDE 386
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
YGIEPKIEHYGCMV+LLGR G V +A EL+K M +PD V+WG LL AC+ HG I + E+
Sbjct: 387 YGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEK 446
Query: 407 VVKEIIALEPNNHGVYVVLSNMYA 430
+V+ ++ N G Y++LSN+YA
Sbjct: 447 IVELLVDQNLANSGTYILLSNIYA 470
>gi|15228026|ref|NP_181211.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216191|sp|Q9ZQA1.1|PP188_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36730
gi|4415918|gb|AAD20149.1| hypothetical protein [Arabidopsis thaliana]
gi|330254198|gb|AEC09292.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 501
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/413 (40%), Positives = 250/413 (60%), Gaps = 6/413 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C S+ L QIH Q+ +SS D F S L+ +LS + DL++A L WN
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWN 82
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
L R +SS +P ++I++Y M+R G PN+ TF F+LKAC++ L +QI V K
Sbjct: 83 MLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH 142
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G D D++V N L+ Y ++AR+VFDE+ R + W ++++ ++ + N F
Sbjct: 143 GFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF 202
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M+ + F P+ T+ +LSAC G L LG+ VH V +R E+ LGTALV MY K+
Sbjct: 203 CEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKS 260
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGV 323
G L A+ +F+ M ++N+ TW+AMI GLA +G AEEAL LF K+ KE V PN +TF+GV
Sbjct: 261 GGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGV 320
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC H G +D G + F M++++ I+P + HYG MVD+LGR G++ EA + IK+M ++P
Sbjct: 321 LCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEP 380
Query: 384 DVVMWGALLAACKNHGNIE---VAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
D V+W LL+AC H + + + E+V K +I LEP G V+++N +AEA
Sbjct: 381 DAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEAR 433
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 253/405 (62%), Gaps = 6/405 (1%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
QL+Q+HA +I++ + ++L+ S+ ++Y LF S+ P+ F++N++I++
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ P + Y M + +P+ +TFT V+K+C+++ +L K +H H SG LD
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+V LV YS D+ ARQVFD + +++ W +++SG+ Q+ A+EA+ +F QM
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
GFEP+S T S+LSACAQ+G + LG VH ++ G ++ LGTAL+++Y++ G + K
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACC 328
A+ +FD M E N+A W AMIS +HG+ ++A++LF K+E + +PN++TFV VLSAC
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV-- 386
HAG ++ GR ++ M + Y + P +EH+ CMVD+LGR G + EA + I ++
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 387 -MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+W A+L ACK H N ++ + K +IALEP+N G +V+LSN+YA
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/427 (40%), Positives = 254/427 (59%), Gaps = 8/427 (1%)
Query: 11 PPLPIPPLSL--LADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
PP P L C K+++ KQ+HAQ + A++L+ A+S+S L
Sbjct: 41 PPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNS--L 98
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A LF+ I N F+WN LIR A + D AI LY M G P+ T FVLKAC
Sbjct: 99 LNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKAC 158
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S + ++ + IH +V KSG + DL V L+ Y+ + +A +VFD+I R +W
Sbjct: 159 SALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWN 218
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+M++ YAQ+ +E++ L +M G P TL +V+S+ A CL G ++H F
Sbjct: 219 SMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRH 278
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
GF+ + TAL+ MY K G++ A ALF+ + E+ + +WNA+I+G A HG A ALDLF
Sbjct: 279 GFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLF 338
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
K+ KE P+ ITFVGVL+AC +D GR ++ M R YGI P ++HY CM+DLLG
Sbjct: 339 DKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGH 397
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
CG++ EA +LI+ M KPD +WGALL +CK HGN+E+AE ++++I LEP++ G YV+L
Sbjct: 398 CGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVIL 457
Query: 426 SNMYAEA 432
+NMYA++
Sbjct: 458 ANMYAQS 464
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 260/430 (60%), Gaps = 21/430 (4%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDH---FAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LA+ C M QLKQ+HA + ++ ++ F ++L SS D++YA R+F+SI++
Sbjct: 54 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIEN 111
Query: 78 PNHFMWNTLIRAQASSLN-PDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCK 135
+ FMWNTLIRA A ++ ++A LY M G +P++HTF FVLKAC+ + + K
Sbjct: 112 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 171
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H + K G D++V N L+ Y L+ AR+VFDE+ R+L W +MI +
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAI 252
+ AL LF +M FEP+ T+ SVLSACA G L LG H F+ + M +
Sbjct: 232 EYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 290
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EK 310
+ +L+ MY K G+L A+ +F M +R++A+WNAMI G A+HG AEEA++ F ++ ++
Sbjct: 291 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 350
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
E + PN +TFVG+L AC H GF++ GRQ F M R Y IEP +EHYGC+VDL+ R G +
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 410
Query: 371 EAEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPNNH-------GVY 422
EA +++ M KPD V+W +LL A CK ++E++E + + II + +N G Y
Sbjct: 411 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 470
Query: 423 VVLSNMYAEA 432
V+LS +YA A
Sbjct: 471 VLLSRVYASA 480
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 260/430 (60%), Gaps = 21/430 (4%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDH---FAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LA+ C M QLKQ+HA + ++ ++ F ++L SS D++YA R+F+SI++
Sbjct: 45 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIEN 102
Query: 78 PNHFMWNTLIRAQASSLN-PDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCK 135
+ FMWNTLIRA A ++ ++A LY M G +P++HTF FVLKAC+ + + K
Sbjct: 103 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 162
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H + K G D++V N L+ Y L+ AR+VFDE+ R+L W +MI +
Sbjct: 163 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 222
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAI 252
+ AL LF +M FEP+ T+ SVLSACA G L LG H F+ + M +
Sbjct: 223 EYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 281
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EK 310
+ +L+ MY K G+L A+ +F M +R++A+WNAMI G A+HG AEEA++ F ++ ++
Sbjct: 282 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 341
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
E + PN +TFVG+L AC H GF++ GRQ F M R Y IEP +EHYGC+VDL+ R G +
Sbjct: 342 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 401
Query: 371 EAEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPNNH-------GVY 422
EA +++ M KPD V+W +LL A CK ++E++E + + II + +N G Y
Sbjct: 402 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 461
Query: 423 VVLSNMYAEA 432
V+LS +YA A
Sbjct: 462 VLLSRVYASA 471
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/447 (40%), Positives = 257/447 (57%), Gaps = 40/447 (8%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHF 81
+KC+SM QL+Q H+Q+I + L+ FCA +S+ D L+YA +LF+SI P+ F
Sbjct: 30 EKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAF 89
Query: 82 MWNTLIRA-QASSLNPDKAIFL-YMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
++NT+I+ S L P +I L Y +M + PN TF +L AC R + QIH
Sbjct: 90 LYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIAC---RKIQHGMQIHA 146
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA------- 192
H+ K G +N L+ Y L AR+VF I + WT++ISGY+
Sbjct: 147 HLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDE 206
Query: 193 ------------------------QSFRANEALMLFDQMLMEGFEP-NSVTLASVLSACA 227
Q+ R +EA LFD+M E + ++LSAC
Sbjct: 207 AFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACT 266
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE--RNIATW 285
G L+ G+ +H ++K G E+ + L TA+V MY K G L KA +F S+P R I++W
Sbjct: 267 GLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSW 326
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
N MI GLA HG+ E A+ LF+++E++++ P+DITF+ +L+AC H+G ++ GR F M R
Sbjct: 327 NCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIR 386
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
VYGIEP++EH+GCMVDLLGR G V EA +LI M PDV + G LL ACK H NIE+ E
Sbjct: 387 VYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGE 446
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ + +I LEPNN G YV+L+N+YA A
Sbjct: 447 EIGRRVIELEPNNSGRYVLLANLYANA 473
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/453 (38%), Positives = 260/453 (57%), Gaps = 37/453 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-----LSYATR 70
P L+LL C S LK IH ++ + I D F ASRLLA C S+ + L YA
Sbjct: 14 PKLALL-QSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
+F+ IQ+PN F++N LIR ++ P KA Y M ++ P+ TF F++KA S +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS----------------------------- 161
+ +Q H+ + + G D++V N LV Y+
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 162 --VSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
+ NAR++FDE+ +R L W+ MI+GYA++ +A+ LF+ M EG N +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 220 ASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE 279
SV+S+CA G LE GE+ + +V + ILGTALV M+ + G + KA +F+ +PE
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
+ +W+++I GLA HGHA +A+ F ++ +P D+TF VLSAC H G ++ G +I
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ +MK+ +GIEP++EHYGC+VD+LGR GK+ EAE I +M KP+ + GALL ACK +
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 400 NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
N EVAERV +I ++P + G YV+LSN+YA A
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACA 465
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 246/406 (60%), Gaps = 2/406 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++H K+IH+++ + D + L++ S G + A +F+ + + W +
Sbjct: 343 ALHWGKEIHSRVAKAGFTSDIGVQNALISM--YSRCGSIKDARLVFDKMVRKDVISWTAM 400
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I A S +A+ +Y M++ G PN+ T+T +L ACS+ +L ++IH V ++GL
Sbjct: 401 IGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGL 460
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D HV N LV YS+ + +ARQVFD + R + + MI GYA EAL LFD+
Sbjct: 461 ATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDR 520
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+ EG +P+ VT ++L+ACA SG LE ++H V+ GF +G ALV Y K G+
Sbjct: 521 LQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGS 580
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A +F+ M +RN+ +WNA+I G A HG ++AL LF +++ E + P+ +TFV +LSA
Sbjct: 581 FSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSA 640
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG ++ GR+ F SM + + I P IEHYGCMVDLLGR G++ EAE LIK M ++ +
Sbjct: 641 CSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTR 700
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL AC+ HGN+ VAER + + L+ +N VYV LS+MYA A
Sbjct: 701 IWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAA 746
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 200/369 (54%), Gaps = 4/369 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H++++ + D + L+ A G ++F + + + WNT+I A
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYA--KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
++A +Y M+R G PN+ T+ +L AC N +L+ K+IH+ V+K+G D+
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG 364
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ YS + +AR VFD++ + + WT MI G A+S EAL ++ +M G
Sbjct: 365 VQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAG 424
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EPN VT S+L+AC+ LE G ++H V G A +G LV+MY+ G++ A+
Sbjct: 425 VEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDAR 484
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M +R+I +NAMI G A+H +EAL LF +L++E + P+ +T++ +L+AC ++G
Sbjct: 485 QVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 544
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ R+I ++ R G +V +CG +A + ++M K +V+ W A+
Sbjct: 545 SLEWAREIH-TLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAI 602
Query: 392 LAACKNHGN 400
+ HG
Sbjct: 603 IGGSAQHGR 611
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 218/436 (50%), Gaps = 22/436 (5%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSS--------GDLSYATRLFNSIQSPNHFMW 83
+Q+H +I + D + + L+ S LSY R +S W
Sbjct: 43 RQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHS--------W 94
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N ++ +KA+ L M++ G AP++ T L +C + +L ++IH +
Sbjct: 95 NAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQ 154
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+GL D+ V NC++ Y+ + AR+VFD++ +++ WT I GYA R+ A +
Sbjct: 155 AGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEI 214
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F +M EG PN +T SVL+A + L+ G+ VH + G E +GTALV MY K
Sbjct: 215 FQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAK 274
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G+ + +F+ + R++ WN MI GLA G+ EEA +++ ++++E ++PN IT+V +
Sbjct: 275 CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVIL 334
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L+AC ++ + G++I + + G I ++ + RCG + +A + +MV +
Sbjct: 335 LNACVNSAALHWGKEIHSRVAKA-GFTSDIGVQNALISMYSRCGSIKDARLVFDKMV-RK 392
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
DV+ W A++ G A V +E+ +EPN Y + N + +++ I
Sbjct: 393 DVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNR-VTYTSILNACSSPAALEWGRRI 451
Query: 442 LLVQVLFAGLASAADI 457
QV+ AGLA+ A +
Sbjct: 452 HQ-QVVEAGLATDAHV 466
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 170/352 (48%), Gaps = 7/352 (1%)
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+ D A+ + +++ G N + +LK C V+ L +Q+H H+ + D + V
Sbjct: 2 IEKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV 61
Query: 154 NCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N L+ Y + ARQV+ ++ RT++ W M+ GY Q +AL L QM G
Sbjct: 62 NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+ T+ S LS+C G LE G ++H G + +++MY K G++ +A+
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAR 181
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M ++++ +W I G A G +E A ++F+K+E+E +VPN IT++ VL+A
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA 241
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ G+ + + G E +V + +CG + ++ +++V D++ W +
Sbjct: 242 ALKWGKAVHSRILNA-GHESDTAVGTALVKMYAKCGSYKDCRQVFEKLV-NRDLIAWNTM 299
Query: 392 LAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
+ G E A V ++ + PN YV+L N + ++ EI
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMPNKI-TYVILLNACVNSAALHWGKEI 350
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 257/410 (62%), Gaps = 5/410 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAF-CALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
+ +L+Q HA ++++ + ++LL CA +G ++Y RLF S+ P+ F++N+L
Sbjct: 23 LRRLQQAHAHLVVTGCHRSRALLTKLLTLSCA---AGSIAYTRRLFRSVSDPDSFLFNSL 79
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I+A ++ A+F Y M + P+ +TFT V+KAC+++ L +H+HV SG
Sbjct: 80 IKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGY 139
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ V LV Y+ S AR+VFDE+ R++ W +MISGY Q+ A+EA+ +F++
Sbjct: 140 ASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNK 199
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M G EP+S T SVLSAC+Q G L+LG +H + G M +L T+LV+M+++ G
Sbjct: 200 MRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGD 259
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ +A+A+FDSM E N+ +W AMISG HG+ EA+++F +++ +VPN +T+V VLSA
Sbjct: 260 VGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSA 319
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV- 385
C HAG I+ GR +F SMK+ YG+ P +EH+ CMVD+ GR G + EA + ++ + + V
Sbjct: 320 CAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVP 379
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
+W A+L ACK H N ++ V + +I+ EP N G YV+LSNMYA A M
Sbjct: 380 AVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRM 429
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 247/417 (59%), Gaps = 2/417 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL +CKSM + K++HA ++ D F S L+A CALS G + YA +F I+
Sbjct: 35 LSLL-KRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEE 93
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P F +NT+IR +S++ ++A+ LY+ M G P+ T+ FVLKACS + +L QI
Sbjct: 94 PGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQI 153
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H HV +GL++D+ V N L+ Y + +A VF+++ +++ W+++I +A
Sbjct: 154 HAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMW 213
Query: 198 NEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+E LML M EG L S LSAC G LG +H + E+ ++ T+
Sbjct: 214 HECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTS 273
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ MY K G+L K +F +M +N ++ MI+GLA HG EAL +F + +E + P+
Sbjct: 274 LIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPD 333
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
D+ +VGVLSAC HAG + G Q F M+ + I+P I+HYGCMVDL+GR G + EA +LI
Sbjct: 334 DVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLI 393
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
K M KP+ V+W +LL+ACK H N+E+ E I L +N G Y+VL+NMYA A+
Sbjct: 394 KSMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQ 450
>gi|449436789|ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/415 (40%), Positives = 252/415 (60%), Gaps = 4/415 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L++ +H + QI AQ+I+ + A + C L A F I
Sbjct: 16 LTIFTTSLSPLH-IPQIQAQLILQNLHSHPLIAHHFINTC--HHLHLLGSAFLFFTHIPK 72
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F+ N+LIRA + S P +FLY +M R +PN +TF FVLK+ ++ + L + +
Sbjct: 73 PHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQSV 132
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
HTHV KSG DL+V N L+ Y+ + ++VFDE+ + + WT +I GY SF
Sbjct: 133 HTHVVKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFML 192
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
++AL++F+QM G +PN VT+ + L+ACA G +E+G +H FVK + +E+ +LGTAL
Sbjct: 193 DDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKRWEVDVVLGTAL 252
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ MY K G + +A A+F +M E+N+ TWN I+GLAS EEA+ F+++++E + +D
Sbjct: 253 IDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEADD 312
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+T V VLSAC H+G ++ GRQIF S+ +G P I+HY CMVD+L R G + EA +I
Sbjct: 313 VTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVMI 372
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
K M ++ MWG+LL + HG++EV+E + ++ +EP N G YVVLSN+YAE
Sbjct: 373 KDMPFEATRSMWGSLLTGSRAHGSLEVSEIAARRLVEMEPENGGYYVVLSNIYAE 427
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 256/449 (57%), Gaps = 33/449 (7%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M QLKQI AQMI ++ I + A++ L C GDL YA R+FN I SPN FMWN +I
Sbjct: 1 MKQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAII 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
RA ++S P+ A Y M + N +TF F+L+AC N+ ++ Q+H V K G
Sbjct: 61 RAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFG 120
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR---TLNV--------------------- 183
D+ +N L+ Y++ +++ ARQ+FD I R + N+
Sbjct: 121 SDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDM 180
Query: 184 -------WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
WT++ISG ++ ++ EAL L +M GFE + V +AS+L+ACA G L+ G
Sbjct: 181 PLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGR 240
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP--ERNIATWNAMISGLAS 294
+H +V G ++ ++G ALV+MY K G + +A ++F + ++++ W AMI G A
Sbjct: 241 WLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAI 300
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG EAL+ F ++ +E I PN ITF VL AC + G ++ G+++F SMK Y + P IE
Sbjct: 301 HGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIE 360
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGCMVDLLGR G++ EA+ELIK+M KP V+WGALL AC H + + +V ++ +
Sbjct: 361 HYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEV 420
Query: 415 EPNNHGVYVVLSNMYAEAESMKMQLEILL 443
+ ++ G Y+ L+ + A K E+ L
Sbjct: 421 DSDHSGRYIQLATILAAEGKWKEAAEVRL 449
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 260/430 (60%), Gaps = 21/430 (4%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDH---FAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LA+ C M QLKQ+HA + ++ ++ F ++L SS D++YA R+F+SI++
Sbjct: 111 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIEN 168
Query: 78 PNHFMWNTLIRAQASSLN-PDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCK 135
+ FMWNTLIRA A ++ ++A LY M G +P++HTF FVLKAC+ + + K
Sbjct: 169 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 228
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H + K G D++V N L+ Y L+ AR+VFDE+ R+L W +MI +
Sbjct: 229 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 288
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAI 252
+ AL LF +M FEP+ T+ SVLSACA G L LG H F+ + M +
Sbjct: 289 EYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 347
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EK 310
+ +L+ MY K G+L A+ +F M +R++A+WNAMI G A+HG AEEA++ F ++ ++
Sbjct: 348 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 407
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
E + PN +TFVG+L AC H GF++ GRQ F M R Y IEP +EHYGC+VDL+ R G +
Sbjct: 408 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 467
Query: 371 EAEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPNNH-------GVY 422
EA +++ M KPD V+W +LL A CK ++E++E + + II + +N G Y
Sbjct: 468 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 527
Query: 423 VVLSNMYAEA 432
V+LS +YA A
Sbjct: 528 VLLSRVYASA 537
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 259/417 (62%), Gaps = 2/417 (0%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNSI 75
PLSLL KC S+ +LKQ+ A I + D ++ + FC+L+ ++ + +A LF+ I
Sbjct: 23 PLSLLP-KCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQI 81
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
P+ ++NT+ R A + P +A L+ + +G P+ +TF +LKAC++ ++L +
Sbjct: 82 PQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR 141
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H K GL +++V L+ Y+ ++++ AR+VFD+I + + MI+GYA+
Sbjct: 142 QLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGS 201
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
R NEAL LF ++ +P VT+ SVLS+CA G L+LG+ +H +VK GF + T
Sbjct: 202 RPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDT 261
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
AL+ MY K G+L A +F++M R+ W+AMI A HGH +A+ LF+++ K P
Sbjct: 262 ALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEP 321
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
++ITF+G+L AC H G ++ G + F M+ YG+ P I+HYGCMVDLLGR G++ EA E
Sbjct: 322 DEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEF 381
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
I + +P ++W LL+AC +HGN+E+ +RV+++I L+ ++ G Y++LSN+ A A
Sbjct: 382 IVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARA 438
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/438 (38%), Positives = 248/438 (56%), Gaps = 29/438 (6%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLL-------------------------AFCA 58
K S H+ KQIHA ++ + D F + L+ +F A
Sbjct: 141 KLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTA 200
Query: 59 LSSS----GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
L + G + A +LF+ + + WN +I A +A+ L+ +MR+ PN
Sbjct: 201 LIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPN 260
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T VL AC+ +L+ + + + GL +L +VN L+ YS DL AR++FD
Sbjct: 261 ESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFD 320
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
++ R + W MI GY EAL LF +ML G EP +T S+L +CA G ++L
Sbjct: 321 DMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDL 380
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G+ +H ++ + L T+L+ +Y K G + A+ +FD M +++A+WNAMI GLA
Sbjct: 381 GKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAM 440
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG A++A +LF K+ + I PN+ITFVG+LSAC HAG +D+G+Q F SM + Y I PK +
Sbjct: 441 HGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQ 500
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGCM+DLLGR G EAE L++ M KPD +WG+LL AC++HG +E+ E V + + L
Sbjct: 501 HYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFEL 560
Query: 415 EPNNHGVYVVLSNMYAEA 432
EP+N G YV+LSN+YA A
Sbjct: 561 EPDNPGAYVLLSNIYAGA 578
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 243/453 (53%), Gaps = 40/453 (8%)
Query: 11 PPLPI----PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
PP + P L LL+ KC+S+ KQIHA +I + FA S+L+ F A+S SGD+S
Sbjct: 22 PPYRVLQEHPSLKLLS-KCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDIS 80
Query: 67 YATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
YA LFNSI+ PN F+WN++IR + SL+P A+ ++ M +G PN +TF F+LK+C+
Sbjct: 81 YAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCA 140
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN------------------ 168
+ S + KQIH HV K G D+ + L+ Y+ S ++NN
Sbjct: 141 KLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTA 200
Query: 169 -------------ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
ARQ+FDE+ + + W MI+GYAQ R+ EAL+LF+ M PN
Sbjct: 201 LIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPN 260
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
T+ SVLSACAQS L+LG + +++ RG L AL+ MY+K G L A+ LFD
Sbjct: 261 ESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFD 320
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
M ER++ +WN MI G +EAL LFR++ + P +ITF+ +L +C H G ID+
Sbjct: 321 DMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDL 380
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
G+ I + + + ++DL +CG ++ A ++ M K + W A++
Sbjct: 381 GKWIHAYINKNFNSVSTSLSTS-LIDLYAKCGNIVAARQVFDGMKIK-SLASWNAMICGL 438
Query: 396 KNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
HG + A + ++ + +EPN +LS
Sbjct: 439 AMHGQADKAFELFSKMSSDGIEPNEITFVGILS 471
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 230/375 (61%), Gaps = 2/375 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S G + A ++F+ I + WN +I A + N +A+ L+ M +T P++ T
Sbjct: 180 ASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMV 239
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ AC+ S+ +Q+H+ + GL +L +VN L+ YS ++ A +F + N+
Sbjct: 240 TVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK 299
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W TMI GY EAL+LF +ML G PN VT+ S+L ACAQ G ++ G +H
Sbjct: 300 DVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIH 359
Query: 240 VFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
V++ +++G + L T+L+ MY K G + A +F+SM R ++ NAMI G A HG
Sbjct: 360 VYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGR 419
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A A D+F ++ K I P+DITFVG+LSAC H+G +D+GR+IF SM + Y I PK+EHYG
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYG 479
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CM+DLLG G EAEE+I M +PD V+W +LL ACK HGN+E+ E +++I +EP
Sbjct: 480 CMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPE 539
Query: 418 NHGVYVVLSNMYAEA 432
N G YV+LSN+YA A
Sbjct: 540 NPGSYVLLSNIYATA 554
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 261/546 (47%), Gaps = 80/546 (14%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNS 74
P LSLL + CK++ L+ IHAQMI + ++A SRLL FC LS + D L YA +F +
Sbjct: 4 PSLSLLHN-CKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFET 62
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
IQ PN +WNT+ R A S +P AI LY+ M G PN +TF F+LK+C+ ++
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122
Query: 135 KQIHTHVSKSGLDLDLHV-------------------------------VNCLVRCYSVS 163
+QIH HV K G +LDL+V L+ Y+
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
+ +A+++FDEI + + W +ISGYA + EAL LF +M+ +P+ T+ +V+
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQSG ++LG +VH ++ G + AL+ +Y+K G + A LF + +++
Sbjct: 243 SACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVI 302
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN MI G +EAL LF+++ + PND+T + +L AC G ID GR I +
Sbjct: 303 SWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYI 362
Query: 344 -KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-------------------- 382
KR+ G+ ++D+ +CG + A ++ M +
Sbjct: 363 DKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANA 422
Query: 383 --------------PDVVMWGALLAACKNHGNIEVAERVVKEI-----IALEPNNHGVYV 423
PD + + LL+AC + G +++ R+ + + I + ++G +
Sbjct: 423 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMI 482
Query: 424 VL---SNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPD----FESPPTNLTPNRST 476
L ++ EAE M + + V++ L A + N + F + P
Sbjct: 483 DLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPG 542
Query: 477 PFVLLN 482
+VLL+
Sbjct: 543 SYVLLS 548
>gi|449498539|ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/415 (40%), Positives = 252/415 (60%), Gaps = 4/415 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LS+ +H + QI AQ+I+ + A + C L A F I
Sbjct: 16 LSIFTTSLSPLH-IPQIQAQLILQNLHSHPLIAHHFINTC--HHLHLLGSAFLFFTHIPK 72
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F+ N+LIRA + S P +FLY +M R +PN +TF FVLK+ ++ + L + +
Sbjct: 73 PHVFICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQSV 132
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
HTHV KSG DL+V N L+ Y+ + ++VFDE+ + + WT +I GY SF
Sbjct: 133 HTHVVKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFML 192
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
++AL++F+QM G +PN VT+ + L+ACA G +E+G +H FVK + +E+ +LGTAL
Sbjct: 193 DDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKRWEVDVVLGTAL 252
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ MY K G + +A A+F +M E+N+ TWN I+GLAS EEA+ F+++++E + +D
Sbjct: 253 IDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEADD 312
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+T V VLSAC H+G ++ GRQIF S+ +G P I+HY CMVD+L R G + EA +I
Sbjct: 313 VTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVMI 372
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
M ++ MWG+LL + HG++EV+E ++++ +EP N G YVVLSN+YAE
Sbjct: 373 NDMPFEATRSMWGSLLTGSRAHGSLEVSEIAARKLVEMEPENGGYYVVLSNIYAE 427
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 159/426 (37%), Positives = 257/426 (60%), Gaps = 4/426 (0%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGD 64
+S++ P + + + +++ + +QIHA +I+ H F + L+ A + G+
Sbjct: 118 NSVQPDEFTFPCILKVCSRLQALSEGEQIHA-LIMKCGFGSHGFVKNTLIHMYA--NCGE 174
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
+ A R+F+ + N WN++ S N ++ + L+ M ++ T VL A
Sbjct: 175 VEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTA 234
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C + L + I+ +V + GL + ++ LV Y+ ++ AR++FD++ R + W
Sbjct: 235 CGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAW 294
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+ MISGY+Q+ R EAL LF +M +PN +T+ S+LS+CA G LE G+ VH F+K
Sbjct: 295 SAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKK 354
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
+ ++ LGTAL+ Y K G++ + +F MP +N+ +W +I GLAS+G ++AL+
Sbjct: 355 KRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEY 414
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F + ++ + PND+TF+GVLSAC HAG +D GR +F SM R +GIEP+IEHYGCMVD+LG
Sbjct: 415 FYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILG 474
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R G + EA + IK M +P+ V+W LLA+CK H N+E+ E +K++I LEP + G Y++
Sbjct: 475 RAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYIL 534
Query: 425 LSNMYA 430
LSN+YA
Sbjct: 535 LSNIYA 540
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 208/388 (53%), Gaps = 2/388 (0%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
P P +L+ ++CK++ L +IHA +I + + A LL A+ + YA +F
Sbjct: 22 FPENPKTLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIF 81
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
I P+ +N +IR +P +AI L+ M P++ TF +LK CS +++L+
Sbjct: 82 RQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALS 141
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+QIH + K G V N L+ Y+ ++ AR+VFDE+ R + W +M +GY
Sbjct: 142 EGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYT 201
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+S E + LF +ML + VTL SVL+AC + LELGE ++ +V+ +G +
Sbjct: 202 KSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPT 261
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
L T+LV MY K G + A+ LFD M R++ W+AMISG + EALDLF +++K
Sbjct: 262 LITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKAN 321
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
I PN+IT V +LS+C G ++ G+ + +K+ ++ + ++D +CG V +
Sbjct: 322 IDPNEITMVSILSSCAVLGALETGKWVHFFIKK-KRMKLTVTLGTALMDFYAKCGSVESS 380
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGN 400
E+ +M K +V+ W L+ ++G
Sbjct: 381 IEVFGKMPVK-NVLSWTVLIQGLASNGQ 407
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 242/398 (60%), Gaps = 6/398 (1%)
Query: 41 SSRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNP 96
+ ++ D + ++++ AL +S G ++ A ++F+ I + WN +I A + N
Sbjct: 142 ARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNN 201
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ L+ M +T P++ T V+ AC+ S+ +Q+H+ + G +L +VN L
Sbjct: 202 KEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNAL 261
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ Y ++ A +F+ + + + W T+I GY EAL+LF +ML G PN
Sbjct: 262 IDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 321
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
VT+ S+L ACA G +E+G +HV++ +++G + T+L+ MY K G + A+ +F
Sbjct: 322 VTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVF 381
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
DS+ R++++WNAMI G A HG A A D+F ++ K +I P+DITFVG+LSAC H+G +D
Sbjct: 382 DSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLD 441
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+GR IF SMK Y I PK+EHYGCM+DLLG G EAEE+I M +PD V+W +LL A
Sbjct: 442 LGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA 501
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
CK HGN+E+ E + +I +EP N G YV+LSN+YA A
Sbjct: 502 CKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 539
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 261/531 (49%), Gaps = 79/531 (14%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRA 89
L+ IHAQMI + ++A S+L+ FC LS D L YA +F +IQ PN +WNT+ R
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
A S +P A++LY+ M G PN +TF F+LK+C+ ++ +QIH HV K G DLD
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 150 LHVVNCLVRCYSVSSDLNNARQV-------------------------------FDEIRN 178
L+V L+ Y + L +AR+V FDEI
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ + W MISGYA++ EAL LF +M+ P+ T+ SV+SACAQS +ELG +V
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H ++ GF + AL+ +Y K G + A LF+ + +++ +WN +I G
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYG 357
+EAL LF+++ + PND+T + +L AC H G I++GR I + KR+ G+ H
Sbjct: 303 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRT 362
Query: 358 CMVDLLGRCGKVLEAEELIKRMV------W----------------------------KP 383
++D+ +CG + A+++ ++ W +P
Sbjct: 363 SLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 422
Query: 384 DVVMWGALLAACKNHGNIEVAE---RVVKEIIALEPN--NHGVYVVL---SNMYAEAESM 435
D + + LL+AC + G +++ R +KE + P ++G + L S ++ EAE M
Sbjct: 423 DDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 482
Query: 436 KMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL---TPNRSTPFVLLN 482
+E+ V++ L A + N + ES NL P +VLL+
Sbjct: 483 INTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLS 533
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 250/447 (55%), Gaps = 37/447 (8%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
+L +KCK+++ LKQ HAQ+ + + FA SRLLAFC+ G L+YA R+F I P
Sbjct: 10 VLLEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFERIHHPT 69
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+ NT+I+ + N ++ M G P+ +T +VLKAC+ +R + K +H
Sbjct: 70 LCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDCSLGKMVHG 129
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+ SK GL D+ V N L+ YSV D+ AR VFDE+ + W+ MISGYA+ +
Sbjct: 130 YSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAKVGDVDS 189
Query: 200 ALMLFDQ----------MLMEGFEPNSV---------------------TLASVLSACAQ 228
A + FD+ ++ G+ NS S+LSACA
Sbjct: 190 ARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAH 249
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G L++G +H ++ + + L T+L+ MY K G L AK LFDSMPER+I WNAM
Sbjct: 250 LGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAM 309
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
ISGLA HG AL +F ++EK I P+DITF+ V +AC ++G G Q+ M +Y
Sbjct: 310 ISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYE 369
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV---W--KPDVVMWGALLAACKNHGNIEV 403
IEPK EHYGC+VDLL R G EA +I+R+ W + + W A L+AC NHG ++
Sbjct: 370 IEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLSACCNHGQAQL 429
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYA 430
AER K ++ LE N+ GVYV+LSN+YA
Sbjct: 430 AERAAKRLLRLE-NHSGVYVLLSNLYA 455
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 252/405 (62%), Gaps = 6/405 (1%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
QL+Q+HA +I++S + ++L+ S+ ++Y LF S+ P+ F++N++I++
Sbjct: 24 QLQQVHAHLIVTSYGRSRSLLTKLITLAC--SARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ P + Y M + +P+ +TFT V+K+C+++ +L K +H H SG LD
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLD 141
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+V LV YS D+ ARQVFD + +++ W +++SG+ Q+ A +A+ +F QM
Sbjct: 142 TYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRE 201
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
GFEP+S T S+LSACAQ+G + LG VH ++ G ++ LGTAL+++Y++ G + K
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGK 261
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACC 328
A+ +FD M E N+A W AMIS +HG+ ++A+DLF K+E + +PN++TFV VLSAC
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACA 321
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV-- 386
HAG ++ GR ++ M Y + P +EH+ C+VD+LGR G + EA I+++ +
Sbjct: 322 HAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAP 381
Query: 387 -MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+W A+L ACK H N ++ + K +IALEP N G +V+LSN+YA
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYA 426
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 251/429 (58%), Gaps = 2/429 (0%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
SS + LSLL +CKSM + KQ+HA ++ D F S L+A CALS G +
Sbjct: 22 SSELNAKFNVQGLSLL-KRCKSMEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSM 80
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
YA +F I+ P F +NT+IR +S+N ++A+ LY+ M G P+ T+ FVLKAC
Sbjct: 81 EYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKAC 140
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S + +L QIH HV K+GL+ D+ V N L+ Y + +A VF+++ +++ W+
Sbjct: 141 SLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWS 200
Query: 186 TMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
++I +A +E LML M EG L S LSAC G G +H +
Sbjct: 201 SIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLR 260
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
E+ + T+L+ MY K+G+L K +F +M ++N ++ +I+GLA HG EAL +
Sbjct: 261 NISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSV 320
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F + +E + P+D+ +VGVLSAC HAG ++ G Q F ++ + I+P I+HYGCMVDL+G
Sbjct: 321 FSDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMG 380
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R G + A +LIK M KP+ V+W +LL+ACK H N+E+ E + I L +N G Y+V
Sbjct: 381 RAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLV 440
Query: 425 LSNMYAEAE 433
L+NMYA A+
Sbjct: 441 LANMYARAK 449
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 255/443 (57%), Gaps = 35/443 (7%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI-QSPN 79
L + C ++ L Q HA M+ + D+ S L + SS G YA LF S+ PN
Sbjct: 17 LLNHCSNLKHLHQTHAFMLCRALDHDNLLLS--LFIQSSSSLGFSLYAYSLFTSLTHPPN 74
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F++NT+IRA + S P +IFL+ ++ P+ ++F F LKA + + Q H+
Sbjct: 75 IFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFHS 134
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSS--------------------------------DLN 167
+ GL LHV+ L+R YS S D+
Sbjct: 135 QAIRFGLHSHLHVLVSLIRMYSSSHISDARKLFDGIPLTARNVALWNAMLTSYAKICDMP 194
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
NA+ +FD + R L WT +ISGYA R ++A+ +F M ++ P+ +TL +VLSACA
Sbjct: 195 NAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVLSACA 254
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
Q G LELGE + ++ + G L AL+ MY K+G + +A +F+SM + I TW
Sbjct: 255 QLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTT 314
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
MI+GLA HG +AL++F ++E++++ PN+ITF+ VLSAC H G + + R F +M+ Y
Sbjct: 315 MIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRY 374
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
I+PKIEHYGCM+DLLGR G + EA++L+++M ++P+ +WG+LLAA HG+ + ER
Sbjct: 375 TIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAMLGERT 434
Query: 408 VKEIIALEPNNHGVYVVLSNMYA 430
+K +I LEPNN G Y +LSN+YA
Sbjct: 435 LKHLIELEPNNSGNYALLSNIYA 457
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 250/422 (59%), Gaps = 9/422 (2%)
Query: 18 LSLLADKCKSMHQL--------KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
LS + KC S+ QL KQIHA I + ++ L F +S S +S+A
Sbjct: 30 LSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAA 89
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNV 128
++FN IQ+PN F WNT+IR A S NP A+ L+ M + P+ HTF F+ KA + +
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
++ + IH+ V ++G D V N LV YSV L +A QVF+ + R W ++I
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVI 209
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+G+A + NEAL L+ +M EG EP+ T+ S+LSAC + G L LGE+VH+++ G
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLV 269
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
AL+ +Y+K G A+ +FD M ER++ +W ++I GLA +G EAL LF +L
Sbjct: 270 QNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGEL 329
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
E++ + P++ITFVGVL AC H G +D G F MK YGI P+IEH+GCMVDLL R GK
Sbjct: 330 ERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGK 389
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
V +A + I+ M P+ V+W LL AC HG++E+ E EI LE + G +V+LSN+
Sbjct: 390 VGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNL 449
Query: 429 YA 430
YA
Sbjct: 450 YA 451
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 257/463 (55%), Gaps = 43/463 (9%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L +A+KC SM K IHA + Q +L F A+S GDLSYA +F+ +
Sbjct: 10 LVYMAEKCISMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQ 69
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P F +NTLIRA + S P + + MRR AP++ +FTF+LK+ S L I
Sbjct: 70 PTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKSRSFTMPL--VHDI 127
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSV----------------------------------- 162
H V K G LHV N L+ Y+V
Sbjct: 128 HGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAK 187
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+ +L+ AR+VFD + R + WT M+S Y+++ R +E L LF +M + G P+ VT+ SV
Sbjct: 188 AGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSV 247
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
+SACA+ G E+G VH FV+ GF L +L+ MY K G L +A +FD +++
Sbjct: 248 ISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSL 307
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TWNAM+ A+HG+AE+A LF + +VP+ +T + +L A H GF+D G ++F S
Sbjct: 308 ITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFES 367
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+R YG+EP+IEHYG +VD+LGR G++ EA L+ M + V+WGALL AC+ HG++
Sbjct: 368 MQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVG 427
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMY------AEAESMKMQL 439
+ ERV+K+++ L+P+ G Y++L ++Y AEA M+ +
Sbjct: 428 MGERVIKKLLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAM 470
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 242/396 (61%), Gaps = 6/396 (1%)
Query: 43 RIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDK 98
++ D + ++++ AL +S GD+ A +LF+ I + WN +I A + +
Sbjct: 120 KVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKE 179
Query: 99 AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR 158
A+ L+ M + P++ T+ VL AC++ S+ +Q+H+ V G D +L +VN L+
Sbjct: 180 ALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALID 239
Query: 159 CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVT 218
YS ++ A +F + + + W T+I GY EAL+LF +ML G PN VT
Sbjct: 240 LYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 299
Query: 219 LASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+ SVL ACA G +++G +HV++ +++G + L T+L+ MY K G + A +F+S
Sbjct: 300 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 359
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
M +++++WNAMI G A HG A+ + DLF ++ K I P+DITFVG+LSAC H+G +D+G
Sbjct: 360 MLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLG 419
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
R IF SM + Y + PK+EHYGCM+DLLG G EAEE+I M +PD V+W +LL ACK
Sbjct: 420 RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 479
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
HGN+E+AE + +I +EP N Y++LSN+YA A
Sbjct: 480 MHGNVELAESFAQNLIKIEPENPSSYILLSNIYASA 515
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/509 (29%), Positives = 244/509 (47%), Gaps = 79/509 (15%)
Query: 53 LLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGF 111
L+ C S D L YAT +F +IQ PN +WNT+IR A S +P ++ LY+ M G
Sbjct: 1 LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGL 60
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV------------------- 152
PN +TF F+LK+C+ ++ +QIH V K G DLDL+V
Sbjct: 61 LPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYK 120
Query: 153 ------------VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
L+ Y+ D+ +A+++FDEI + + W MISGYA++ EA
Sbjct: 121 VFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEA 180
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L LF++M+ P+ T +VLSACA SG +ELG +VH +V GF+ + AL+ +
Sbjct: 181 LELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDL 240
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y+K G + A LF + +++ +WN +I G +EAL LF+++ + PND+T
Sbjct: 241 YSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 300
Query: 321 VGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+ VL AC H G ID+GR I + KR+ G+ ++D+ +CG + A ++ M
Sbjct: 301 LSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360
Query: 380 VWK----------------------------------PDVVMWGALLAACKNHGNIEVAE 405
+ K PD + + LL+AC + G +++
Sbjct: 361 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGR 420
Query: 406 RVVKEII---ALEPN--NHGVYVVL---SNMYAEAESMKMQLEILLVQVLFAGLASAADI 457
+ + + + P ++G + L S ++ EAE M +E+ V++ L A +
Sbjct: 421 HIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 480
Query: 458 LQNPDF-ESPPTNL---TPNRSTPFVLLN 482
N + ES NL P + ++LL+
Sbjct: 481 HGNVELAESFAQNLIKIEPENPSSYILLS 509
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 247/429 (57%), Gaps = 32/429 (7%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
SS + LP+ L D C +M +LKQ H+Q+I D+ A R++ FCA+S SG L
Sbjct: 15 SSAKAHKLPLYGL----DSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGYL 70
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+ L R IF+Y M +PN+ T+ +++AC
Sbjct: 71 RW-----------------QLAR---------NCIFMYSRMLHKSVSPNKFTYPPLIRAC 104
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI--RNRTLNV 183
++ KQIH HV K G D +N L+ Y L AR+VFD + R+R
Sbjct: 105 CIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVS 164
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI+ Y QS R +EA LFD+M +E + AS+LSAC G LE G+ +H +++
Sbjct: 165 WNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIE 224
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
G E+ + L T ++ MY K G L KA +F+ +P++ I++WN MI GLA HG E A++
Sbjct: 225 KSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIE 284
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF+++E+E + P+ ITFV VLSAC H+G ++ G+ F M V G++P +EH+GCMVDLL
Sbjct: 285 LFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLL 344
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
GR G + EA +LI M PD + GAL+ AC+ HGN E+ E++ K++I LEP+N G YV
Sbjct: 345 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYV 404
Query: 424 VLSNMYAEA 432
+L+N+YA A
Sbjct: 405 LLANLYASA 413
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 245/419 (58%), Gaps = 3/419 (0%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCAL-SSSGDLSYATRLFN 73
+ ++L AD +M K +HA +I +S +H A + + G L A +LFN
Sbjct: 199 VSMVNLFADTA-NMRMGKAMHAYVIRNSN-NEHMGVPTTTALLDMYAKCGHLGLARQLFN 256
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+ W +I S ++ L++ M+ PN+ T ++ C +L
Sbjct: 257 GLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQL 316
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
KQ+H ++ ++G + L + LV Y SD+ NAR +FD +NR + +WT M+S YAQ
Sbjct: 317 GKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQ 376
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ ++A LFDQM G P VT+ S+LS CA +G L+LG+ VH ++ E+ IL
Sbjct: 377 ANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCIL 436
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
TALV MY K G + A LF R+I WNA+I+G A HG+ EEALD+F ++E++ +
Sbjct: 437 NTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGV 496
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PNDITF+G+L AC HAG + G+++F M +G+ P+IEHYGCMVDLLGR G + EA
Sbjct: 497 KPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAH 556
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
E+IK M KP+ ++WGAL+AAC+ H N ++ E +++ +EP N G V++SN+YA A
Sbjct: 557 EMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAA 615
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 194/394 (49%), Gaps = 14/394 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAF---CALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
K+IH ++ +D F + L+ CA + YA +F+ + + W+T+IR
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECAC-----VEYARLVFDKMMERDVVSWSTMIR 168
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+ + + D A+ L M P++ ++ ++ ++ K +H +V ++ +
Sbjct: 169 SLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 228
Query: 149 DLHV--VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ V L+ Y+ L ARQ+F+ + +T+ WT MI+G +S R E LF +
Sbjct: 229 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIR 288
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M E PN +T+ S++ C +G L+LG+++H ++ GF + L TALV MY K
Sbjct: 289 MQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSD 348
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A+ALFDS R++ W AM+S A ++A +LF ++ + P +T V +LS
Sbjct: 349 IRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSL 408
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C AG +D+G+ + + + +E +VD+ +CG + A L + + D+
Sbjct: 409 CAVAGALDLGKWVHSYIDKER-VEVDCILNTALVDMYAKCGDINAAGRLFIEAISR-DIC 466
Query: 387 MWGALLAACKNHGNIEVAERVVKEI--IALEPNN 418
MW A++ HG E A + E+ ++PN+
Sbjct: 467 MWNAIITGFAMHGYGEEALDIFAEMERQGVKPND 500
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 142/276 (51%), Gaps = 4/276 (1%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VLKAC V K+IH V K GLD D+ V N L+ Y + + AR VFD++ R
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ W+TMI +++ + AL L +M P+ V + S+++ A + + +G+ +H
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 241 FV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
+V MG TAL+ MY K G L A+ LF+ + ++ + +W AMI+G
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EE LF ++++E I PN+IT + ++ C G + +G+Q+ + R G +
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILR-NGFSVSLALATA 338
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+VD+ G+C + A L DV++W A+L+A
Sbjct: 339 LVDMYGKCSDIRNARALFDS-TQNRDVMIWTAMLSA 373
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
SVL AC Q +LG+++H FV +G + +G AL+ MY + + A+ +FD M ER
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
++ +W+ MI L+ + + AL+L R++ Q+ P+++ V +++ F D
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL-----FADTANMRM 213
Query: 341 GSMKRVYGIE-PKIEHYG-----CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G Y I EH G ++D+ +CG + A +L + K VV W A++A
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKT-VVSWTAMIAG 272
Query: 395 CKNHGNIE 402
C +E
Sbjct: 273 CIRSNRLE 280
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 172/417 (41%), Positives = 248/417 (59%), Gaps = 13/417 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL + C SM L QI F A LL FCA S G+L++A L + +
Sbjct: 673 LSLL-NLCSSMKHLFQIRGH---------GFIAGPLLRFCASSPLGNLNHARVLLSGSEK 722
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
WN LIR+ A+ +P +AI Y+ MR G +P++ TF +LKAC+ + + N ++I
Sbjct: 723 SEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAAISAFNEGRKI 782
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
V K GLD +++V N ++ Y + +AR++FDE+ RT+ W ++S +
Sbjct: 783 QVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWL 842
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
N++ LF +M GF+P+ T+ +LSAC++ G L G VH V +G + LGTAL
Sbjct: 843 NDSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTAL 902
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K GA+ +A +F M ERN+ TW+AMI GLA HG A+EAL+LF K+++ I PN
Sbjct: 903 VDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNY 962
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+TF+GVL AC HAG +D G + F M+ V+GIEP + HYG MVD+L R G++ EA I
Sbjct: 963 VTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFIL 1022
Query: 378 RMVWKPDVVMWGALLAACKNHG---NIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
M + D V+W LL+AC HG N V ++V K ++ LEP G +V+++NMYAE
Sbjct: 1023 NMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAE 1079
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 264/441 (59%), Gaps = 25/441 (5%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSS-SGDLSYATRLFNS 74
P +S+L DKCKS+ +L+QIHAQMI ++ + F SRL+AFC+LS SG L YA+ +F+
Sbjct: 8 PVVSVL-DKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSR 66
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF--VLKACSNVRSLN 132
IQ PN F++ LI+ + + NP +++ LY M + F+ VLKAC + + +
Sbjct: 67 IQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFD 126
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+Q+H V K+ L D V N +VR Y ++ AR+VFD + NR + W +MI+GY
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 193 QSFRANEALMLFDQM-------------------LMEGFEPNSVTLASVLSACAQSGCLE 233
++ A LFD+M L G P+ + SVLSA A G +E
Sbjct: 187 KAGEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVE 246
Query: 234 LGEKVHVFVKMRGFEMGA-ILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISG 291
G+ +H +V M E+ + +G+AL+ MY+K G + A +F S+ RNI WN+MISG
Sbjct: 247 EGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISG 306
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
LA HG A EALD+F ++E+ I PN+ITF+G+LS C H G ++ G+ F SM Y I P
Sbjct: 307 LAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVP 366
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+I+HYGCM+DL GR G++ +A +I+ M ++ D++ W A+L+A HG+IE+ +
Sbjct: 367 RIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRA 426
Query: 412 IALEPNNHGVYVVLSNMYAEA 432
I L P++ YV+LSN+YA+A
Sbjct: 427 IELAPDDSSSYVLLSNIYAKA 447
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 259/444 (58%), Gaps = 34/444 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL +C ++ L Q H M+ QD+ SR + C SS G Y+ +F
Sbjct: 45 LSLL-KQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEAC--SSLGFSHYSHSIFTHKTR 101
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ +++NT+I+A ++ +AI LY + + + ++ FVLKA + +++ +QI
Sbjct: 102 PDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQI 161
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYS----VSS---------------------------DL 166
H +GL D+HVV L++ YS VS D+
Sbjct: 162 HCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDV 221
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+NAR +F+ + R + WT +I+GYAQ R NEA+ +F +M +E EP+ + + + LSAC
Sbjct: 222 DNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSAC 281
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A G LELGE +H ++ G L AL+ MY K G + KA +F +M +++ TW
Sbjct: 282 AHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWT 341
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+MI GLA HG EAL++F +E+ +I PN+ITFV +LSACCH G +++GR F M
Sbjct: 342 SMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTK 401
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
YGI+PKI+HYGCM+DLLGR G + EA+EL++ M ++ + +WG+LLAA + HG+ E+ ++
Sbjct: 402 YGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQ 461
Query: 407 VVKEIIALEPNNHGVYVVLSNMYA 430
++ +I +EP+N G Y +LSN+YA
Sbjct: 462 ALQHLIKVEPHNSGNYTLLSNIYA 485
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 153/318 (48%), Gaps = 37/318 (11%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P+ H + +LK CSN++ L+ Q H + GLD D +++ + S + + +
Sbjct: 40 PSYHLLS-LLKQCSNLKHLH---QTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSI 95
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
F + ++ T+I + A EA++L++++L ++ +L VL A + +
Sbjct: 96 FTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAI 155
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+G ++H G + TAL+ MY+ G +++A+ LFD + R++A WNAM++G
Sbjct: 156 HVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGY 215
Query: 293 ASHGHAE-------------------------------EALDLFRKLEKEQIVPNDITFV 321
A G + EA+ +FR+++ E++ P++I +
Sbjct: 216 AKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAML 275
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
LSAC H G +++G I + + +G+ + ++D+ +CGK+ +A E+ K M
Sbjct: 276 AALSACAHLGALELGEWIHNYIDK-HGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEH 334
Query: 382 KPDVVMWGALLAACKNHG 399
K V+ W +++ HG
Sbjct: 335 K-SVITWTSMIDGLALHG 351
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 231/379 (60%), Gaps = 6/379 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S GD A ++F+ I + WN +I + ++A+ L+ M RT P++ T
Sbjct: 141 ASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLV 200
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKS----GLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
V+ AC+ S+ +Q+H+ V G L +VN L+ YS D+ A +F+
Sbjct: 201 SVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEG 260
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ + + W T+I GY + EAL+LF +ML G PN VTL SVL ACA G +++G
Sbjct: 261 LSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIG 320
Query: 236 EKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
+HV++ K++G L T+L+ MY K G + A +F+SM R++++WNAMI G A
Sbjct: 321 RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFA 380
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
HG A A DLF ++ ++ P+DITFVG+LSAC H+G +D+GRQIF SM + Y + PK+
Sbjct: 381 MHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKL 440
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGCM+DLLG G EAEE+I M +PD V+W +LL ACK HGN+E+AE +++I
Sbjct: 441 EHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIK 500
Query: 414 LEPNNHGVYVVLSNMYAEA 432
+EP N G YV+LSN+YA A
Sbjct: 501 IEPENSGSYVLLSNIYATA 519
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 245/513 (47%), Gaps = 83/513 (16%)
Query: 53 LLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGF 111
LL C +S D L YA +F +IQ PN +WNT++R ASS +P A+ +Y+ M G
Sbjct: 1 LLELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGH 60
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH-------------------- 151
PN ++F F+LK+C+ ++ +QIH V K G LD +
Sbjct: 61 LPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARK 120
Query: 152 ---------VVNC--LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
VV+C L+ Y+ D +AR+VFDEI R + W MI+GY ++ R EA
Sbjct: 121 VFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEA 180
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV----KMRGFEMGAILGTA 256
L LF +M+ P+ TL SV+SACAQSG +ELG +VH +V GF + A
Sbjct: 181 LELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNA 240
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ +Y+K G + A LF+ + +++ +WN +I G +EAL LF+++ + PN
Sbjct: 241 LIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPN 300
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
D+T + VL AC H G ID+GR I + K++ G+ + ++D+ +CG + A ++
Sbjct: 301 DVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQV 360
Query: 376 IKRMVWK----------------------------------PDVVMWGALLAACKNHGNI 401
M+++ PD + + LL+AC + G +
Sbjct: 361 FNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLL 420
Query: 402 EVAERVVKEIIA---LEPN--NHGVYVVL---SNMYAEAESMKMQLEILLVQVLFAGLAS 453
++ ++ K + L P ++G + L S ++ EAE M + + V++ L
Sbjct: 421 DLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLK 480
Query: 454 AADILQNPD----FESPPTNLTPNRSTPFVLLN 482
A N + F + P S +VLL+
Sbjct: 481 ACKKHGNLELAESFAQKLIKIEPENSGSYVLLS 513
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 259/444 (58%), Gaps = 34/444 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL +C ++ L Q H M+ QD+ SR + C SS G Y+ +F
Sbjct: 45 LSLL-KQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEAC--SSLGFSHYSHSIFTHKTR 101
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ +++NT+I+A ++ +AI LY + + + ++ FVLKA + +++ +QI
Sbjct: 102 PDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQI 161
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYS----VSS---------------------------DL 166
H +GL D+HVV L++ YS VS D+
Sbjct: 162 HCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDV 221
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+NAR +F+ + R + WT +I+GYAQ R NEA+ +F +M +E EP+ + + + LSAC
Sbjct: 222 DNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSAC 281
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A G LELGE +H ++ G L AL+ MY K G + KA +F +M +++ TW
Sbjct: 282 AHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWT 341
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+MI GLA HG EAL++F +E+ +I PN+ITFV +LSACCH G +++GR F M
Sbjct: 342 SMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTK 401
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
YGI+PKI+HYGCM+DLLGR G + EA+EL++ M ++ + +WG+LLAA + HG+ E+ ++
Sbjct: 402 YGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQ 461
Query: 407 VVKEIIALEPNNHGVYVVLSNMYA 430
++ +I +EP+N G Y +LSN+YA
Sbjct: 462 ALQHLIKVEPHNSGNYTLLSNIYA 485
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 153/318 (48%), Gaps = 37/318 (11%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P+ H + +LK CSN++ L+ Q H + GLD D +++ + S + + +
Sbjct: 40 PSYHLLS-LLKQCSNLKHLH---QTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSI 95
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
F + ++ T+I + A EA++L++++L ++ +L VL A + +
Sbjct: 96 FTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAI 155
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+G ++H G + TAL+ MY+ G +++A+ LFD + R++A WNAM++G
Sbjct: 156 HVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGY 215
Query: 293 ASHGHAE-------------------------------EALDLFRKLEKEQIVPNDITFV 321
A G + EA+ +FR+++ E++ P++I +
Sbjct: 216 AKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAML 275
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
LSAC H G +++G I + + +G+ + ++D+ +CGK+ +A E+ K M
Sbjct: 276 AALSACAHLGALELGEWIHNYIDK-HGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEH 334
Query: 382 KPDVVMWGALLAACKNHG 399
K V+ W +++ HG
Sbjct: 335 K-SVITWTSMIDGLALHG 351
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 260/421 (61%), Gaps = 7/421 (1%)
Query: 16 PP----LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATR 70
PP LSL+ KC S+ +LKQI A I + + + ++L+ FC + + + +A R
Sbjct: 33 PPSSSILSLIP-KCTSLRELKQIQAYTIKTHQ-NNPTVLTKLINFCTSNPTIASMDHAHR 90
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
+F+ I P+ ++NT+ R A +P +AI L + +G P+ +TF+ +LKAC+ +++
Sbjct: 91 MFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKA 150
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
L KQ+H K G+ +++V L+ Y+ +D++ AR+VFD+I + + +I+
Sbjct: 151 LEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITS 210
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
A++ R NEAL LF ++ G +P VT+ LS+CA G L+LG +H +VK GF+
Sbjct: 211 CARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQY 270
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+ TAL+ MY K G+L A ++F MP R+ W+AMI A+HGH +A+ + R+++K
Sbjct: 271 VKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKK 330
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
++ P++ITF+G+L AC H G ++ G + F SM YGI P I+HYGCM+DLLGR G++
Sbjct: 331 AKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLE 390
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
EA + I + KP ++W LL++C +HGN+E+A+ V++ I L+ ++ G YV+LSN+ A
Sbjct: 391 EACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCA 450
Query: 431 E 431
Sbjct: 451 R 451
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 269/461 (58%), Gaps = 37/461 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L++L + C +++ QI+ +I + + A++R L FCA S SG+++YA +LF +
Sbjct: 29 PCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCA-SPSGNINYAYKLFVRM 87
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
+PN + WNT+IRA + S P AI L+++M + P T+ V KA + + +
Sbjct: 88 PNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGA 147
Query: 136 QIHTHVSKSGL-----------------------------------DLDLHVVNCLVRCY 160
Q+H V K GL D D+ +N ++ Y
Sbjct: 148 QLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGY 207
Query: 161 SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLA 220
+ +++ +R +FD++ RT W +MISGY ++ + EAL LF++M +EGFE + T+
Sbjct: 208 AKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMV 267
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
S+L+ACA G L+ G+ VH ++K FE+ I+ TA++ MY K G++ A +F++ P R
Sbjct: 268 SLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRR 327
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQI 339
++ WN++I GLA +GH EA + F KLE +++ P+ ++F+GVL+AC H G I+ R
Sbjct: 328 GLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDY 387
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
F M Y IEP I+HY C+VD+LG+ G + EAEELIK M KPD ++WG+LL++C+ H
Sbjct: 388 FELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHR 447
Query: 400 NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLE 440
N+++A R + + L P++ YV++SN++A + + +E
Sbjct: 448 NVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIE 488
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 250/441 (56%), Gaps = 32/441 (7%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA------------------------- 58
K K+ + +QIHAQ++ D +A + L++ A
Sbjct: 95 KSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTA 154
Query: 59 ----LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
+S GD+ A ++F+ I + WN +I + ++A+ L+ M RT P+
Sbjct: 155 LITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPD 214
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ T VL AC+ S+ ++IHT V G L +VN + YS D+ A +F
Sbjct: 215 EGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLF 274
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
+ + + + W T+I GY EAL+LF +ML G PN VT+ SVL ACA G ++
Sbjct: 275 EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 334
Query: 234 LGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
+G +HV++ +++G G+ L T+L+ MY K G + A +F+SM +++++WNAMI G
Sbjct: 335 IGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFG 394
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HG A A DLF ++ K I P+DIT VG+LSAC H+G +D+GR IF S+ + Y I P
Sbjct: 395 FAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITP 454
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
K+EHYGCM+DLLG G EAEE+I M +PD V+W +LL ACK HGN+E+AE +++
Sbjct: 455 KLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKL 514
Query: 412 IALEPNNHGVYVVLSNMYAEA 432
+ +EP N G YV+LSN+YA A
Sbjct: 515 MEIEPENSGSYVLLSNIYATA 535
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/528 (28%), Positives = 248/528 (46%), Gaps = 80/528 (15%)
Query: 35 HAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRAQASS 93
HAQM+ + ++A S+LL C +S D L YA +F + Q PN +WNT++R ASS
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH-- 151
+ + +Y+ M G PN +TF F+LK+C+ ++ +QIH V K G +LD +
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 152 ---------------------------VVNC--LVRCYSVSSDLNNARQVFDEIRNRTLN 182
VV+C L+ Y+ D+ +AR+VFD I R +
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W MI+GY ++ EAL LF +M+ P+ TL SVLSACAQSG +ELG ++H V
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241
Query: 243 -KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
GF + A + +Y+K G + A LF+ + +++ +WN +I G +EA
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMV 360
L LF+++ + PND+T + VL AC H G ID+GR I + KR+ G+ ++
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361
Query: 361 DLLGRCGKVLEAEELIKRMVWK----------------------------------PDVV 386
D+ +CG + A ++ M+ K PD +
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421
Query: 387 MWGALLAACKNHGNIEVAERVVKEI-----IALEPNNHGVYVVL---SNMYAEAESMKMQ 438
LL+AC + G +++ + K + I + ++G + L + ++ EAE +
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481
Query: 439 LEILLVQVLFAGLASAADILQNPD----FESPPTNLTPNRSTPFVLLN 482
+ + V++ L A + N + F + P S +VLL+
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLS 529
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 266/474 (56%), Gaps = 68/474 (14%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
++A M+ ++ QD + ++ ++ ALS+ + YA + ++ PN F++N +I+ S
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFIS--ALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQS 58
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
P +A+ LY+ M R +P +TF ++KAC V L + +H HV ++G D + V
Sbjct: 59 YQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQ 118
Query: 154 NCLVRCYS--------------------------VSS-----DLNNARQVFDEIRNRTLN 182
LV YS VS D+++A ++FD + +R L
Sbjct: 119 TSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLA 178
Query: 183 VWTTMISGYA-------------------------------QSFRANEALMLFDQMLMEG 211
W T+I GYA Q+ R EAL +F++M G
Sbjct: 179 TWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHG 238
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+ VT+A+V+SACA G L+LG+++H ++ GF + +G+AL+ MY K G+L ++
Sbjct: 239 ISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSL 298
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F + E+N+ WN++I GLA HG+AEEAL +F K+E+E+I PN +TFV VLSAC HAG
Sbjct: 299 LMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAG 358
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
I+ GR+ F SM R + I P +EHYGCMVDLL + G + EA +LI+ M +P+ V+WGAL
Sbjct: 359 LIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGAL 418
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE----AESMKMQLEI 441
L+ CK H N+E+A+ +++ LEP N G Y +L NM AE E+ K++L +
Sbjct: 419 LSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTM 472
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 240/396 (60%), Gaps = 6/396 (1%)
Query: 43 RIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDK 98
++ D + ++++ AL +SSG++ A +F+ I + WN +I A + + +
Sbjct: 122 KVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKE 181
Query: 99 AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR 158
A+ L+ M +T P++ T VL AC+ RS+ +Q+H+ + G +L +VN L+
Sbjct: 182 ALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALID 241
Query: 159 CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVT 218
YS + A +F+ + + + W T+I GY EAL+LF +ML G PN VT
Sbjct: 242 LYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 301
Query: 219 LASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+ S+L ACA G +++G +HV++ K++ L T+L+ MY K G + A +F+S
Sbjct: 302 IVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNS 361
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
M +++++WNAMI G A HG A DLF ++ K I P+DITFVG+LSAC H+G +D+G
Sbjct: 362 MLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLG 421
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
R IF SM + Y I PK+EHYGCM+DLLG G EA+E+IK M +PD V+W +LL AC+
Sbjct: 422 RHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACR 481
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
HGN+E+AE + ++ +EP N G YV+LSN+YA A
Sbjct: 482 RHGNLELAESFARNLMKVEPENPGSYVLLSNIYATA 517
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 243/511 (47%), Gaps = 79/511 (15%)
Query: 51 SRLLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT 109
S+LL FC LS D YA +F +IQ PN +WNT++R A S +P A+ LY+ M
Sbjct: 1 SKLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISL 60
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV----------------- 152
G PN +TF F+LK+C+ ++ +QIH HV K G + DL+V
Sbjct: 61 GLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDA 120
Query: 153 --------------VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
L+ Y+ S ++ +A+++FDEI + + W MISGYA++
Sbjct: 121 HKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK 180
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LF +M+ P+ T+ +VLSACAQS +ELG +VH ++ GF + AL+
Sbjct: 181 EALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALI 240
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+Y+K G + A LF+ + +++ +WN +I G +EAL LF+++ + PND+
Sbjct: 241 DLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 300
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
T V +L AC H G ID+GR I + K++ + ++D+ +CG + A ++
Sbjct: 301 TIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFN 360
Query: 378 RMVWK----------------------------------PDVVMWGALLAACKNHGNIEV 403
M+ K PD + + LL+AC + G +++
Sbjct: 361 SMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDL 420
Query: 404 AERVVKEI-----IALEPNNHGVYVVL---SNMYAEAESMKMQLEILLVQVLFAGLASAA 455
+ K + I + ++G + L S ++ EA+ M + + V++ L A
Sbjct: 421 GRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKAC 480
Query: 456 DILQNPDF-ESPPTNL---TPNRSTPFVLLN 482
N + ES NL P +VLL+
Sbjct: 481 RRHGNLELAESFARNLMKVEPENPGSYVLLS 511
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 261/462 (56%), Gaps = 41/462 (8%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
S+L +CKSM +L +IH +I ++ S+ L+F ALSSSGD+ YA + + + P
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
++ WN +IR ++S NP+K+I +Y+ M R G P+ T+ F++K+ S + + +H
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 139 THVSKSGLDLDLHVVNCLVR-------------------------------CYSVSSDLN 167
V KSGL+ DL + N L+ Y+ S D+
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSAC 226
+AR VFDE+ R + W++MI GY + N+AL +FDQM+ M + N VT+ SV+ AC
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF--DSMPERNIAT 284
A G L G+ VH ++ + IL T+L+ MY K G++ A ++F S+ E +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNA+I GLASHG E+L LF K+ + +I P++ITF+ +L+AC H G + F S+K
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
G EPK EHY CMVD+L R G V +A + I M KP M GALL C NHGN+E+A
Sbjct: 372 ES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
E V K++I L+P+N G YV L+N+YA A SM+ +E
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAME 472
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 250/450 (55%), Gaps = 35/450 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L+LL +C SM L+Q+HA ++ S +D AASR +AFCA D+ YA RL
Sbjct: 35 PALTLLHTRCVSMAHLRQLHAALVKSGLAKDPIAASRAVAFCA-GPGRDVLYAERLVRHH 93
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
PN FMWNT+IRA + PD A+ L+++M + P++ +F +L A + + +
Sbjct: 94 PRPNSFMWNTVIRALSDGARPDAAVALFVDMLSSPTPPDRRSFPSLLAAYARLGRAGDGE 153
Query: 136 QIHTHVSKSGLDLDLHVVNC-------------------------LVRCYSV------SS 164
+H K GL D +V N +V C SV +
Sbjct: 154 ALHGMALKLGLAGDAYVRNATIAMYASCGRADEALALFGQCPELDVVACNSVIVALARAG 213
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ AR VFD + RT+ W+ M+S YA++ R +EAL LF M +G EPN+ L SVL
Sbjct: 214 RVDEARSVFDAMPERTVATWSAMVSAYARAARCSEALALFSAMQADGMEPNANVLVSVLG 273
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA- 283
CA G L G VH ++ G M A++ TALV MY K G++ A+ +FD+ + +A
Sbjct: 274 CCASLGALVQGAWVHEYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGLAK 333
Query: 284 --TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+WN+M+ GLA HG EA+ LF +L+ + P+++TF+ VL+A H+G D + F
Sbjct: 334 LSSWNSMMQGLAVHGQWREAVALFSELKSYGLSPDNVTFIAVLTAYGHSGMPDEAQAAFA 393
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM +G+EP IEHYGC+VD L R G++ EAE+ I+ M PD +WGALL+ C+ HG+
Sbjct: 394 SMSSEHGVEPGIEHYGCLVDALARAGRLREAEDAIRAMPMAPDAAIWGALLSGCRLHGDA 453
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
E+ R +E + +P + G YV+ +++ A
Sbjct: 454 ELGARAAREAVRCDPRDSGAYVLAASVLAR 483
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/426 (40%), Positives = 257/426 (60%), Gaps = 21/426 (4%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDH---FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C M QLKQ+HA + ++ ++ F ++L SS D++YA R+F+SI++ + F
Sbjct: 35 CSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIENHSSF 92
Query: 82 MWNTLIRAQASSLN-PDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
MWNTLIRA A ++ ++A LY M G +P++HTF FVLKAC+ + + KQ+H
Sbjct: 93 MWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHC 152
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+ K G D++V N L+ Y L+ AR+VFDE+ R+L W +MI + +
Sbjct: 153 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS 212
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAILGTA 256
AL LF +M FEP+ T+ SVLSACA G L LG H F+ + M ++ +
Sbjct: 213 ALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 271
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EKEQIV 314
L+ MY K G+L A+ +F M +R++A+WNAMI G A+HG AEEA++ F ++ ++E +
Sbjct: 272 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 331
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN +TFVG+L AC H GF++ GRQ F M R Y IEP +EHYGC+VDL+ R G + EA +
Sbjct: 332 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 391
Query: 375 LIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPNNH-------GVYVVLS 426
++ M KPD V+W +LL A CK ++E++E + + II + +N G YV+LS
Sbjct: 392 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 451
Query: 427 NMYAEA 432
+YA A
Sbjct: 452 RVYASA 457
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 256/453 (56%), Gaps = 35/453 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P +SLL + C ++ ++KQIHAQ+++ + + + +A AL ++ +L YA +L N
Sbjct: 11 PTISLL-NSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHN 69
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNM---RRTGFAPNQHTFTFVLKACSNVRSLN 132
+P F N++IRA + S P K+ Y N+ +P+ +TFTF+++ C+ +++
Sbjct: 70 NNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHV 129
Query: 133 CCKQIHTHVSKSGLDLDLHV----------VNCLVRCYSV-------------------- 162
+H V K G +LD HV + CL C++V
Sbjct: 130 TGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACA 189
Query: 163 -SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLAS 221
D++ AR++FDE+ R W MI+GYAQ R+ EAL +F M MEG + N V++
Sbjct: 190 KCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVL 249
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
VLSAC L+ G VH +V+ M LGTALV MY K G + +A +F M ERN
Sbjct: 250 VLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERN 309
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+ TW++ I GLA +G EE+LDLF +++E + PN ITF+ VL C G ++ GR+ F
Sbjct: 310 VYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFD 369
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM+ VYGI P++EHYG MVD+ GR G++ EA I M +P V W ALL AC+ + N
Sbjct: 370 SMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNK 429
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
E+ E ++I+ LE N G YV+LSN+YA+ ++
Sbjct: 430 ELGEIAQRKIVELEDKNDGAYVLLSNIYADYKN 462
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/414 (39%), Positives = 252/414 (60%), Gaps = 11/414 (2%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAAS--RLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
SM Q Q+HA+++ S + +L F ALS SGDL+YA + ++ +PN F +N
Sbjct: 5 SMTQAMQLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHILRTLHTPNSFYYN 64
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFA------PNQHTFTFVLKACSNVRSLNCCKQIH 138
T+IRA + S +P +A L++ M+ A P+ T+ FVLKACS KQIH
Sbjct: 65 TMIRAYSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFVLKACSKSGHARFGKQIH 124
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V KSG+ D ++ N L+ YSVS + N A +VFD++ +R + WT++I G+ + R
Sbjct: 125 GLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVDNDRPI 184
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EA+ LF M+ G EPN VT+ASVL ACA +G L GE++H FVK + F A + TAL+
Sbjct: 185 EAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTGERIHSFVKEKNFSSNANVSTALI 244
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY K G + A +FD E+++ W A+I+GLASHG +A++ F ++K + ++
Sbjct: 245 DMYAKCGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDER 304
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
VLSA +AG + G F +K+ + I+P I+HYGC+VD+L R G++ +AEE I++
Sbjct: 305 AITAVLSAYRNAGLVSEGLLFFRRLKK-HKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRK 363
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPNNHGVYVVLSNMYA 430
M +PD V+W L+ CK G++E +ER+V+ E++ ++ + G YV+L N+YA
Sbjct: 364 MPIEPDAVLWRTLIWGCKILGDVERSERLVRELELLNMDSRDTGSYVLLENVYA 417
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 249/410 (60%), Gaps = 5/410 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAF-CALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
+ +L+Q HA ++++ + ++LL CA +G ++Y RLF S+ P+ F++N+L
Sbjct: 23 LRRLQQAHAHLVVTGCHRSRALLTKLLTLSCA---AGSIAYTRRLFRSVSDPDSFLFNSL 79
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I+A + A+ Y M + P+ +TFT V+KAC+++ L +H+HV SG
Sbjct: 80 IKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGY 139
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D V L+ Y+ S AR+VFDE+ R++ W +MISGY Q+ ANEA+ +F++
Sbjct: 140 ASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNK 199
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M EP+S T SVLSAC+Q G L+ G +H + G M +L T+LV+M+++ G
Sbjct: 200 MRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGD 259
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ +A+A+F SM E N+ W AMISG HG+ EA+++F +++ +VPN +TFV VLSA
Sbjct: 260 VGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSA 319
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV- 385
C HAG ID GR +F SMK+ YG+ P +EH+ CMVD+ GR G + EA + +K + V
Sbjct: 320 CAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVP 379
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
+W A+L ACK H N ++ V + +I EP N G YV+LSNMYA A M
Sbjct: 380 AVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRM 429
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/412 (40%), Positives = 257/412 (62%), Gaps = 5/412 (1%)
Query: 27 SMHQLKQIHAQMIISS-RIQDHFAASRLLAF-CALSSSGDLSYATRLFNSIQSP-NHFMW 83
S+ +L+QIHA I + I D L+ + +L S +SYA ++F+ I+ P N F+W
Sbjct: 29 SLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
NTLIR A N A+ LY MR +GF P+ HT+ F+LKA + + + IH+ V
Sbjct: 89 NTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVI 148
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+SG ++V N L+ Y+ D+ +A +VFD++ + L W ++I+G+A++ + EAL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
L+ +M ++G +P+ T+ S+LSACA+ G L LG++ HV++ G L+ +Y
Sbjct: 209 LYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE-KEQIVPNDITFV 321
+ G + +AK LFD M ++N +W ++I GLA +G +EA++LF+ +E KE ++P +ITFV
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFV 328
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
G+L AC H G + G + F M Y IEP+IEH+GCMVDLL R G+V +A E I +M
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPM 388
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+P+VV+W LL AC HG+ ++AE +I+ LEPN+ G YV+LSNMYA +
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQ 440
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/525 (33%), Positives = 288/525 (54%), Gaps = 49/525 (9%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+ KS ++ K+I+A +II Q F ++++ FC D+ YATRLFN + +PN F++
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLY 76
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N++IRA + I +Y + R F P++ TF F+ K+C+++ S KQ+H H+
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR----------------------- 179
K G + N L+ Y DL +A +VFDE+ R
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 180 --------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
T+ WT MISGY EA+ F +M + G EP+ ++L SVL +CAQ G
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LELG+ +H++ + RGF + AL+ MY+K G +++A LF M +++ +W+ MISG
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HG+A A++ F ++++ ++ PN ITF+G+LSAC H G G + F M++ Y IEP
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
KIEHYGC++D+L R GK+ A E+ K M KPD +WG+LL++C+ GN++VA + +
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL 436
Query: 412 IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL 470
+ LEP + G YV+L+N+YA+ + ++ +++N + ++P +L
Sbjct: 437 VELEPEDMGNYVLLANIYADLGK-------------WEDVSRLRKMIRNENMKKTPGGSL 483
Query: 471 TPNRSTPFVLLNGNNTIPGWT-FEGTVQYVTASQTIRLPDNGHAI 514
+ ++G+N+ P WT +Q T+ Q + N +A+
Sbjct: 484 IEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQDQDVITNNNAL 528
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/417 (41%), Positives = 258/417 (61%), Gaps = 14/417 (3%)
Query: 28 MHQLKQIHAQMI-----ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
M L+QIHA+++ ISS F S++L+F ALS G+ YA ++F+ I +P F
Sbjct: 1 MQILRQIHARILTHVPPISSV---SFLISKILSFAALSPFGNFDYARKIFSQIPNPGIFA 57
Query: 83 WNTLIRAQASSLNPDKA-IFLYMNMRRTGFAPNQHTFT--FVLKACSNVRSLNCCKQIHT 139
+N++IR + P K I L+ +M G+ PN +TFT FVLKACS + +L KQIH
Sbjct: 58 YNSVIRGCLYTKIPSKEPIHLFKDMVGKGY-PNPNTFTMAFVLKACSIIMALEEGKQIHA 116
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+ +SG +V + LV YS ++ AR+VFDEI R L W+ M+SGYA+ NE
Sbjct: 117 QILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINE 176
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL++F +M + G EP+ V+L VLSACA G L++G+ VH ++K R + L TAL++
Sbjct: 177 ALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMIHVDLELNTALIN 236
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G + KA+ +FD M ++ W++MI GLA HG AE+AL++F ++E+ Q PN +T
Sbjct: 237 MYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVT 296
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+G+LSAC H G + G++ + SM + GIEP +EHYGCMVDLL R G + EA + +
Sbjct: 297 FIGILSACAHGGLVSDGKRYWSSMLEL-GIEPSMEHYGCMVDLLCRGGLIDEAYDF-ALI 354
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ PD V+W LL A + ++ AE V +++ LEP Y++L+N+YA ++
Sbjct: 355 IPTPDPVIWRTLLVAYTKNRMLQKAEMVAGKLLELEPWKAENYIILANLYASVSQLE 411
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ + KQIHAQ++ S + S L+ F S +++ A ++F+ I N W+ +
Sbjct: 107 ALEEGKQIHAQILRSGFSSSPYVQSSLVNF--YSKCEEITIARKVFDEITERNLVCWSAM 164
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
+ A ++A+ ++ M+ G P++ + VL AC+ V +L+ K +H ++ K +
Sbjct: 165 VSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKRMI 224
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+DL + L+ Y+ + AR++FDE+R + W++MI G A A +AL +F +
Sbjct: 225 HVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSR 284
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M +PN VT +LSACA G + G++ + G E +V + + G
Sbjct: 285 MEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLELGIEPSMEHYGCMVDLLCRGGL 344
Query: 267 LAKAKALFDSMPERNIATWNAMI 289
+ +A +P + W ++
Sbjct: 345 IDEAYDFALIIPTPDPVIWRTLL 367
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 256/455 (56%), Gaps = 46/455 (10%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLL-----AFCALSSSGDLS---------YAT 69
+CKS+ QL Q+HA I + + +S LL AF AL + + S YA
Sbjct: 24 QCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALTGYAL 83
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+FN I +P+ F +NT+IRA +P A+ +++ MRR P+ HTF F LKACS +
Sbjct: 84 SVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKACSLLP 143
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS------------------------- 164
+L+ + +H+ K G DL V N L+ YSV+
Sbjct: 144 ALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNALIG 203
Query: 165 ------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFR-ANEALMLFDQMLMEGFEPNSV 217
D + AR++FD++ R W T+++GYAQS +A+ LF++ML+ P+++
Sbjct: 204 GFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVRPDNI 263
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
L S LSACAQ G LE G+ +HV++K + A L T LV +Y K G + A+ +F+S
Sbjct: 264 ALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETAREIFESS 323
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
P++N+ TWNA++ GL HG +L F ++ + I P+ ++F+G+L C HAG + R
Sbjct: 324 PDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCEAR 383
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
F M+ VY + +++HYGCM DLLGR G + EA E+I+RM DV +WG +L C+
Sbjct: 384 NFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVLGGCRI 443
Query: 398 HGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
HGN+E+AE+ + ++AL P + GVY +++++YA A
Sbjct: 444 HGNVEIAEKAAENVMALNPEDDGVYSIMADIYANA 478
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 257/478 (53%), Gaps = 63/478 (13%)
Query: 18 LSLLADKCK-SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
L LL K S+H LKQ+HA + + QDH+ + L+ A +L++A ++F +
Sbjct: 32 LDLLNTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVP 91
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+PN F++N +I+ + P KAI Y M PN+ T+ + KAC+ + Q
Sbjct: 92 NPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQ 151
Query: 137 IHTHVSKSGLDLDLHV-------------------------------VNCLVRCYSVSSD 165
+H HV K GL D+H+ N ++ Y +
Sbjct: 152 VHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGE 211
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF--- 212
+ A+++F + ++ + W M+SG A+ EA LF++M +++G+
Sbjct: 212 VEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKG 271
Query: 213 ------------------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
P L+SVL+ACA G L+ G +H +V A+LG
Sbjct: 272 GYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLG 331
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
TALV MY K G L A +F+ M ++ + TWNAMI GL HG AE+A++LF K++K++
Sbjct: 332 TALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFR 391
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN IT +GVLSAC H+G +D G +IF SM+ VYGIEP +EHYGC+VDLLGR G + EAEE
Sbjct: 392 PNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEE 451
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
++ M +P +WGALL AC+ HG++E+ ERV K ++ LEP N G Y +LSN+YA A
Sbjct: 452 VMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARA 509
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 249/422 (59%), Gaps = 9/422 (2%)
Query: 18 LSLLADKCKSMHQL--------KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
LS + KC S+ QL KQIHA I + ++ L F +S S +S+A
Sbjct: 30 LSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAA 89
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNV 128
++FN IQ+PN F WNT+IR A S NP A+ L+ M + P+ HTF F+ KA + +
Sbjct: 90 QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
++ + IH+ V ++G D V N LV YSV +A QVF+ + R W ++I
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVI 209
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+G+A + NEAL L+ +M EG EP+ T+ S+LSAC + G L LGE+VH+++ G
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLV 269
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
AL+ +Y+K G A+ +FD M ER++ +W ++I GLA +G EAL LF +L
Sbjct: 270 QNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGEL 329
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
E++ + P++ITFVGVL AC H G +D G F MK YGI P+IEH+GCMVDLL R GK
Sbjct: 330 ERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGK 389
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
V +A + I+ M P+ V+W LL AC HG++E+ E EI LE + G +V+LSN+
Sbjct: 390 VGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNL 449
Query: 429 YA 430
YA
Sbjct: 450 YA 451
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 258/419 (61%), Gaps = 3/419 (0%)
Query: 17 PLSLLA--DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFN 73
P SLL+ KC S+ +LKQI A I + D ++L+ C + ++ + YA +LF
Sbjct: 26 PSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFE 85
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+I P+ ++N++ R + S P KAI L++ P+ +TF +LKAC ++
Sbjct: 86 AIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQ 145
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
KQ+H K GL+ + +V L+ Y+ +D++ A++VFDEI + + +I+GYA+
Sbjct: 146 GKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYAR 205
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
S R NEAL LF Q+ +PN VT+ SVLS+CA G L+LG+ +H +VK G + +
Sbjct: 206 SSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKV 265
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
TAL+ MY K G+L A ++F+SM R+ W+AMI A HG ++ + +F ++ + ++
Sbjct: 266 NTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKV 325
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
P++ITF+G+L AC H G +D G + F SM VYGI P I+HYGCMVDLLGR G + EA
Sbjct: 326 QPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAY 385
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ I + KP ++W LL++C +HGN+E+A++V+ +I+ L+ ++ G YV+LSN+ A A
Sbjct: 386 KFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARA 444
>gi|297827165|ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327304|gb|EFH57724.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/413 (40%), Positives = 247/413 (59%), Gaps = 6/413 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C S+ L QIH Q+ +SS D F S L+ +LS + DL++A L WN
Sbjct: 23 CSSIKHLLQIHGQIHVSSLQNDSFIISELIRVSSLSHTKDLAFARTLLLHSSDSTPSTWN 82
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
L R +SS P ++I++Y M+R PN+ TF F+LKAC++ L +QI V K
Sbjct: 83 MLTRGYSSSDTPVESIWVYSEMKRRRIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH 142
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G D D++V N L+ Y ++AR+VFDE+ R + W ++++ ++ + N + F
Sbjct: 143 GFDSDVYVGNNLIHLYGSCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKFNLVVECF 202
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M+ F P+ T+ +LSAC G L LG+ VH V +R E+ LGTALV MY K+
Sbjct: 203 FEMIGRQFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKS 260
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGV 323
G L A+ +F+ M ++N+ TW+AMI GLA +G AEEAL LF K+ KE V PN +TF+GV
Sbjct: 261 GGLKYARLVFERMADKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGV 320
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC H G +D G + F M++ + I+P + HYG MVD+LGR G++ EA + I++M ++P
Sbjct: 321 LCACSHTGLVDDGYKYFHEMEKRHKIKPMMIHYGAMVDILGRAGRLNEAYDFIQKMPFEP 380
Query: 384 DVVMWGALLAACKNHGNIE---VAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
D V+W LL+AC H + + + E+V K +I LEP G V+++N +AEA
Sbjct: 381 DAVVWRTLLSACSIHHDEDDKGIGEKVKKRLIELEPKRSGNLVIVANRFAEAR 433
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 256/442 (57%), Gaps = 21/442 (4%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+SLL + CK +Q+ I+A++I + QD F LL C S+ + YA+++F+ Q+
Sbjct: 36 ISLLQN-CKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVC--SNLNSIGYASKIFSHTQN 92
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
PN +++ LI S I LY M + P+ + T VLKAC +L +++
Sbjct: 93 PNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREV 152
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-------------- 183
H+ V K GL + + L+ Y +AR+VFDE+ R +
Sbjct: 153 HSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIK 212
Query: 184 ----WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
WT MI G ++ +N AL +F M E PN VT+ VLSAC++ G L+LG V
Sbjct: 213 DTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVR 272
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
++ E+ +G AL++MY++ G + +A+ +F+ M E+N+ T+N+MI G A HG +
Sbjct: 273 SYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSV 332
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA++LFR L K+ P+ +TFVGVL+AC H G ++G +IF SM + YGIEP+IEHYGCM
Sbjct: 333 EAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCM 392
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G++ EA I+ M PD VM GALL+ACK HGN+E+AERV K ++A + +
Sbjct: 393 VDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADS 452
Query: 420 GVYVVLSNMYAEAESMKMQLEI 441
G Y++LSN Y+ + K E+
Sbjct: 453 GTYILLSNAYSSSGKWKEAAEV 474
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 237/401 (59%), Gaps = 33/401 (8%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
+ YA +LF+ I P F++N LI+A +S + LY M G +PN+H+FTF+ A
Sbjct: 32 IPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSA 91
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE--IRN---- 178
C+++ S + +HTH KSG D+ + LV Y+ L+ AR+ FDE +R+
Sbjct: 92 CASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTW 151
Query: 179 -------------------------RTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-F 212
R + WT MISGYAQ+ + +AL +F M E
Sbjct: 152 NSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEM 211
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN VTLASVL ACA G LE+GE++ V+ + G+ + AL+ MY + G + KA
Sbjct: 212 RPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWG 271
Query: 273 LFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ + RN+ +WN+MI GLA HG +EA++LF K+ +E P+D+TFVGVL AC H G
Sbjct: 272 VFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGG 331
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ G+ F SM+R + I PK+EHYGCMVDLLGR G++ EA +LI RM +PD V+WG L
Sbjct: 332 MVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTL 391
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L AC HG++E+AE+ + LEP+N G YV+LSN+YA A
Sbjct: 392 LGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATA 432
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 249/418 (59%), Gaps = 10/418 (2%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L + C +++ LKQIHA++ ++ + + +++ FCA+S +++YA +F+ I P+
Sbjct: 18 LFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQ--NMNYALNVFDKIPKPDS 75
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F+WNT+IR +S + + P+ TF+F+LK + +R +N KQ+H
Sbjct: 76 FLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDNFTFSFILKIIARLRFVNLGKQLHCS 135
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ K G + +V N L+ Y + D+ A Q+F+E+ L W ++I + + NEA
Sbjct: 136 LFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEA 195
Query: 201 LMLFDQMLMEG-----FEPNSVTLASVLSACAQSGCLELGEKVHVFVK--MRGFEMGAIL 253
+ LF +M+ + +P+ TL LSAC G L+ G KVH FV+ + F +
Sbjct: 196 IDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISV 255
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
ALV MY K GA+ +A F +M +N+ +WN MI G ASHG+ EEAL LF ++ E +
Sbjct: 256 FNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENV 315
Query: 314 -VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
P++ITF+ VL AC H G +D GR+ F M R Y I+P I+HYGCMVDLLGR G +EA
Sbjct: 316 ERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEA 375
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
ELIK M + + ++W LLAAC+N+GN+E+ E+V K ++ LEP++ YV+L+NMYA
Sbjct: 376 YELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYA 433
>gi|356560483|ref|XP_003548521.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Glycine max]
Length = 280
Score = 312 bits (799), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 161/288 (55%), Positives = 199/288 (69%), Gaps = 33/288 (11%)
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K LD D HVVN LVRCYSV + AR+VFDE+ ++ ++WTTM+ GYAQ+F +NEAL
Sbjct: 15 KFWLDFDSHVVNALVRCYSVXGNCVGARRVFDEMPEKSSSLWTTMVCGYAQNFCSNEALD 74
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG--AILGTALVHM 260
LF+ M+ EGFEP+ TLASVLSACA+SGCLELGE++H F+ ++G +G ILGTALV++
Sbjct: 75 LFEDMVGEGFEPSGSTLASVLSACARSGCLELGERIHEFMMVKGVGLGDGVILGTALVYL 134
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y KNGA+A A+ LFD M ERN+ TWNAMI GL ++G+ ++ LDL + +VPN +TF
Sbjct: 135 YAKNGAIAMARRLFDEMSERNVVTWNAMICGLGAYGYVDDVLDL----REWVVVPNGVTF 190
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
VGVLSACCHAG IDVG +IF SMK VYGIE KI+HYGC+VDL GR
Sbjct: 191 VGVLSACCHAGLIDVGCEIFRSMKSVYGIELKIQHYGCLVDLHGR--------------- 235
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
A N GN EVAERVVKEI+ALEP N+ V SNM
Sbjct: 236 ------------GASTNSGNTEVAERVVKEILALEPQNNVVLSAFSNM 271
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+ A R+F+ + + +W T++ A + ++A+ L+ +M GF P+ T
Sbjct: 33 SVXGNCVGARRVFDEMPEKSSSLWTTMVCGYAQNFCSNEALDLFEDMVGEGFEPSGSTLA 92
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV--NCLVRCYSVSSDLNNARQVFDEIR 177
VL AC+ L ++IH + G+ L V+ LV Y+ + + AR++FDE+
Sbjct: 93 SVLSACARSGCLELGERIHEFMMVKGVGLGDGVILGTALVYLYAKNGAIAMARRLFDEMS 152
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R + W MI G ++ L L + +++ PN VT VLSAC +G +++G
Sbjct: 153 ERNVVTWNAMICGLGAYGYVDDVLDLREWVVV----PNGVTFVGVLSACCHAGLIDVG-- 206
Query: 238 VHVFVKMR 245
+F M+
Sbjct: 207 CEIFRSMK 214
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 159/401 (39%), Positives = 244/401 (60%), Gaps = 9/401 (2%)
Query: 41 SSRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNP 96
+ ++ D + ++++ AL +S G + A ++F+ I + WN +I A + N
Sbjct: 129 AQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNY 188
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
KA+ L+ M +T P++ T V+ AC+ S+ +Q+H+ ++ G +L +VN L
Sbjct: 189 KKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNAL 248
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ YS ++ A ++ + + N+ + W T+I GY EAL+LF +ML G PN
Sbjct: 249 IDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 308
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV--KMRGFEM--GAILGTALVHMYTKNGALAKAKA 272
VT+ S+L ACA G +++G +HV++ K++G + + L T+L+ MY K G + A
Sbjct: 309 VTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQ 368
Query: 273 LFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+ DS R+++TWNAMI G A HG A A D+F ++ K I P+DITFVG+LSAC H+G
Sbjct: 369 VSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSG 428
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+GR IF SM++ Y I PK+EHYGCM+DLLG G EAEE+I M +PD V+W +L
Sbjct: 429 MLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSL 488
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L ACK HGN+E+ E K++I +EP N G YV+LSN+YA A
Sbjct: 489 LKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATA 529
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 209/409 (51%), Gaps = 37/409 (9%)
Query: 47 HFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
H+A S+LL FC LS D L YA +F +I PN +WN + R A S +P A+ LY+
Sbjct: 6 HYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVV 65
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M G PN TF F+LK+C+ ++ +QIH HV K G DLDL+V L+ Y+ +
Sbjct: 66 MISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGR 125
Query: 166 LNNARQV-------------------------------FDEIRNRTLNVWTTMISGYAQS 194
L +A++V FDEI + + W MISGYA++
Sbjct: 126 LEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAET 185
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+AL LF +M+ +P+ T+A+V+SACAQSG +ELG +VH ++ GF +
Sbjct: 186 GNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIV 245
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ +Y+K G + A L + + +++ +WN +I G +EAL LF+++ +
Sbjct: 246 NALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 305
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYG--IEPKIEHYGCMVDLLGRCGKVLE 371
PND+T + +L AC H G ID+GR I + K++ G + ++D+ +CG +
Sbjct: 306 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDA 365
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
A ++ + + W A++ HG A + + +EP++
Sbjct: 366 APQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDD 414
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L A ++F+++PE N WN M G A AL L+ + ++PN TF +L
Sbjct: 24 GLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLK 83
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
+C + G+QI G + ++ G + + + ++ + + G++ +A+++ R + DV
Sbjct: 84 SCAKSKTFKEGQQIHGHVLKL-GFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHR-DV 141
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV-YVVLSNMYAEAESMKMQLEIL 442
V + AL+ + G IE A+++ EI P V + + + YAE + K LE+
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEI----PIKDVVSWNAMISGYAETGNYKKALELF 195
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 232/375 (61%), Gaps = 2/375 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S G + A ++F+ I + WN +I A + N +A+ L+ +M +T P++ T
Sbjct: 168 ASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 227
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ AC+ S+ +Q+H+ + G +L +VN L+ YS +L A +F+ + +
Sbjct: 228 TVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK 287
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W T+I GY EAL+LF +ML G PN VT+ S+L ACA G +++G +H
Sbjct: 288 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 347
Query: 240 VFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
V++ +++G + L T+L+ MY K G + A +F+S+ +++++WNAMI G A HG
Sbjct: 348 VYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 407
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A+ + D+F ++ K I P+DITFVG+LSAC H+G +D+GR IF SM + Y + PK+EHYG
Sbjct: 408 ADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYG 467
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CM+DLLG G EAEE+I M +PD V+W +LL ACK HGN+E+ E + +I +EP
Sbjct: 468 CMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPE 527
Query: 418 NHGVYVVLSNMYAEA 432
N G YV+LSN+YA A
Sbjct: 528 NPGSYVLLSNIYATA 542
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 260/534 (48%), Gaps = 79/534 (14%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTL 86
+ L+ IHAQMI + ++A S+L+ FC LS D L YA +F +IQ PN +WNT+
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
R A S +P A+ LY+ M G PN +TF F+LK+C+ ++ +QIH HV K G
Sbjct: 63 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGC 122
Query: 147 DLDLHV-------------------------------VNCLVRCYSVSSDLNNARQVFDE 175
DLDL+V L++ Y+ + NA+++FDE
Sbjct: 123 DLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDE 182
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
I + + W MISGYA++ EAL LF M+ P+ T+ +V+SACAQSG +ELG
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 242
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+VH ++ GF + AL+ +Y+K G L A LF+ +P +++ +WN +I G
Sbjct: 243 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHM 302
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIE 354
+EAL LF+++ + PND+T + +L AC H G ID+GR I + KR+ G+
Sbjct: 303 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASS 362
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWK-------------------------------- 382
++D+ +CG + A ++ ++ K
Sbjct: 363 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNG 422
Query: 383 --PDVVMWGALLAACKNHGNIEVAERVVKEII---ALEPN--NHGVYVVL---SNMYAEA 432
PD + + LL+AC + G +++ + + + + P ++G + L S ++ EA
Sbjct: 423 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 482
Query: 433 ESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL---TPNRSTPFVLLN 482
E M +E+ V++ L A + N + ES NL P +VLL+
Sbjct: 483 EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLS 536
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 249/432 (57%), Gaps = 9/432 (2%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS 60
+ LK ++L P L I +LLA + M H +I +D + L+ A
Sbjct: 121 LGLKPNNLTYPFLFIACSNLLAVENGRMG-----HCSVIRRGLDEDGHVSHSLITMYA-- 173
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
G + A ++F+ I + WN++I + + +A+ L+ M GF PN+ +
Sbjct: 174 RCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVS 233
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VL AC + L + V ++ + L+ + + L+ Y DL +AR++FD ++ +
Sbjct: 234 VLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKD 293
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W MI+GYAQ+ + EA+ LF M M P+ +TL +LSACA G L+LG++V +
Sbjct: 294 KVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEI 353
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+ RGF+ +GTALV MY K G+L A +F MP++N +WNAMIS LA HG A+E
Sbjct: 354 YASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQE 413
Query: 301 ALDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
AL LF+ + E + PNDITFVGVLSAC HAG +D GR++F M +G+ PKIEHY C
Sbjct: 414 ALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSC 473
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
MVDL R G + EA + + M KPD V+ GALL AC+ NI+++ERV+K ++ LEP+N
Sbjct: 474 MVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSN 533
Query: 419 HGVYVVLSNMYA 430
G YV+ S +YA
Sbjct: 534 SGNYVISSKLYA 545
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 234/427 (54%), Gaps = 24/427 (5%)
Query: 14 PIPPLSLLADK-------CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
P P L+DK C S+ QLKQIHAQ++ +S H S L L D +
Sbjct: 24 PNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSI---HKPNSFLYKIADLK---DFA 77
Query: 67 YATRLFNSIQSPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTGFAPNQHTFTFVLKAC 125
YA+ F++I P + +N +IR +++ N A+ Y M+ G PN T+ F+ AC
Sbjct: 78 YASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIAC 137
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
SN+ ++ + H V + GLD D HV + L+ Y+ + +AR+VFDEI + L W
Sbjct: 138 SNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWN 197
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+MISGY++ A EA+ LF +M+ GF+PN ++L SVL AC + G L+LG V FV
Sbjct: 198 SMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVEN 257
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
+ +G+AL+HMY K G L A+ +FDSM +++ TWNAMI+G A +G +EEA+ LF
Sbjct: 258 KMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLF 317
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ--IFGSMKRVYGIEPKIEHYGCMVDLL 363
+ + P+ IT +G+LSAC G +D+G+Q I+ S + G + + +VD+
Sbjct: 318 QDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASER---GFQDDVYVGTALVDMY 374
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII----ALEPNNH 419
+CG + A + M K + V W A+++A HG + A + K ++ + PN+
Sbjct: 375 AKCGSLDNAFRVFYGMP-KKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDI 433
Query: 420 GVYVVLS 426
VLS
Sbjct: 434 TFVGVLS 440
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 244/387 (63%), Gaps = 7/387 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTF 118
S G +++A ++F+ I + WN++I A + +A+ ++ M RR GF P++ +
Sbjct: 162 SRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSL 221
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
VL AC + L + + V + G+ L+ ++ + L+ Y+ DL +AR++FD +
Sbjct: 222 VSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAA 281
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
R + W +ISGYAQ+ A+EA+ LF M + N +TL +VLSACA G L+LG+++
Sbjct: 282 RDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQI 341
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
+ RGF+ + TAL+ MY K G+LA A+ +F MP++N A+WNAMIS LASHG A
Sbjct: 342 DEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKA 401
Query: 299 EEALDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+EAL LF+ + E PNDITFVG+LSAC HAG ++ G ++F M ++G+ PKIEHY
Sbjct: 402 KEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHY 461
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
CMVDLL R G + EA +LI++M KPD V GALL AC++ N+++ ERV++ I+ ++P
Sbjct: 462 SCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDP 521
Query: 417 NNHGVYVVLSNMYAE----AESMKMQL 439
+N G Y++ S +YA +S +M+L
Sbjct: 522 SNSGNYIISSKIYANLNMWEDSARMRL 548
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 222/392 (56%), Gaps = 13/392 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ- 76
L LA +C S L+Q+HAQM++ S I H + LL+ + +YA+ LF+ I
Sbjct: 21 LVFLAKQCSSSKTLQQVHAQMVVKSSI--HSPNNHLLS--KAIHLKNFTYASLLFSHIAP 76
Query: 77 SPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
PN + +N +IRA ++ + A+ L+ M +PN TF F +C+N+ L+ +
Sbjct: 77 HPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPAR 136
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
H+ V K L D H + L+ YS + AR+VFDEI R L W +MI+GYA++
Sbjct: 137 AAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAG 196
Query: 196 RANEALMLFDQM-LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
A EA+ +F +M +GFEP+ ++L SVL AC + G LELG V FV RG + + +G
Sbjct: 197 CAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIG 256
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+AL+ MY K G L A+ +FD M R++ TWNA+ISG A +G A+EA+ LF ++++ +
Sbjct: 257 SALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVT 316
Query: 315 PNDITFVGVLSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
N IT VLSAC G +D+G+QI + S + G + I ++D+ +CG + A
Sbjct: 317 ENKITLTAVLSACATIGALDLGKQIDEYASQR---GFQHDIFVATALIDMYAKCGSLASA 373
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + K M K + W A+++A +HG + A
Sbjct: 374 QRVFKEMPQKNEAS-WNAMISALASHGKAKEA 404
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 180/481 (37%), Positives = 256/481 (53%), Gaps = 65/481 (13%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATRLF 72
P+P LS ++ KS+ +++Q HA M+ + D F+AS+L+AF A + +SYA +
Sbjct: 9 PVPILSF-TERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 67
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
N I+SPN F N++IRA A+S P+ A+ ++ M P++++FTFVLKAC+
Sbjct: 68 NRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 127
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV-------------------- 172
+QIH KS L D+ V N L+ Y S AR+V
Sbjct: 128 EGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 187
Query: 173 -----------FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM-------------- 207
FDE+ R + W MISGYA + EA +FD M
Sbjct: 188 DKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTA 247
Query: 208 ---------LMEGF---------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
++E F P+ TL +VLSACA G L GE VHV++ G E+
Sbjct: 248 YAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEI 307
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ TALV MY+K G + KA +F +R+++TWN++I+GL+ HG ++AL++F ++
Sbjct: 308 EGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMV 367
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E PN ITF+GVLSAC H G +D R++F M VYGIEP IEHYGCMVDLLGR GK
Sbjct: 368 YEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKF 427
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EAEEL+ + ++ +LL ACK G +E AER+ ++ P YV +SN+Y
Sbjct: 428 EEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLY 487
Query: 430 A 430
A
Sbjct: 488 A 488
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 250/476 (52%), Gaps = 64/476 (13%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK++ L QIH I S D + +L+ CA+S S L YA RL P+ FM+N
Sbjct: 182 CKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFN 241
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
TL+R + S P ++ +++ M R GF P+ +F FV+KA +N RSL Q+H K
Sbjct: 242 TLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALK 301
Query: 144 SGLDLDLHVVNCLVRCYS-------------------------------VSSDLNNARQV 172
GLD L V L+ Y +D++ AR++
Sbjct: 302 HGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREI 361
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRA-------------------------------NEAL 201
FD++ R W M++GY ++ NE+
Sbjct: 362 FDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESF 421
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
F ++L PN V+L VLSAC+QSG E G+ +H FV+ G+ + AL+ MY
Sbjct: 422 SYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMY 481
Query: 262 TKNGALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
++ G + A+ +F+ M E R+I +W +MI+GLA HGH EEA+ +F ++ + ++P++I+F
Sbjct: 482 SRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISF 541
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+ +L AC HAG I G F MKRVY IEP +EHYGCMVDL GR GK+ +A I +M
Sbjct: 542 ISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMP 601
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
P ++W LL AC +HGNIE+AE+V + + L+PNN G V+LSN+YA A K
Sbjct: 602 IPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWK 657
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 185/474 (39%), Positives = 266/474 (56%), Gaps = 59/474 (12%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSS--SGDLSYATRLFNSIQSPNHFM 82
C+++ L QIHA I S +I+D AA+ +L FCA S DL YA ++FN + N F
Sbjct: 26 CRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 85
Query: 83 WNTLIRAQASSLNPDKA---IFLYMNMRRTGF-APNQHTFTFVLKACSNVRSLNCCKQIH 138
WNT+IR + S + DKA I L+ M F PN+ TF VLKAC+ + KQIH
Sbjct: 86 WNTIIRGFSES-DEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIH 144
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVS----------------------------------- 163
K G D V++ LVR Y +
Sbjct: 145 GLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLW 204
Query: 164 ----------SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM-EGF 212
D AR +FD++R R++ W TMISGY+Q+ +A+ +F +M E
Sbjct: 205 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDI 264
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN VTL SVL A ++ G LELGE +H++ + G + +LG+AL+ MY+K G + KA
Sbjct: 265 RPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIM 324
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F+ +P N+ TW+AMI+G A HG A +A+D F K+ + + P+D+ ++ +L+AC HAG
Sbjct: 325 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGL 384
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ GR+ F M V G+EP+IEHYGCMVDLLGR G + EAEE I M KPD V+W ALL
Sbjct: 385 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALL 444
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
AC+ H N+E+ +RV ++ + P++ G YV LSNMYA E M+++++
Sbjct: 445 GACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 498
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 155/332 (46%), Gaps = 58/332 (17%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS----DLNNARQVFDEIR 177
+ C +R L+ QIH KSG D ++R + S DL+ A ++F+++
Sbjct: 23 INTCRTIRDLS---QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 79
Query: 178 NRTLNVWTTMISGYAQSF--RANEALMLFDQMLMEGF-EPNSVTLASVLSACAQSGCLEL 234
R W T+I G+++S +A A+ LF +M+ + F EPN T SVL ACA++G ++
Sbjct: 80 QRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQ 139
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYT-------------KN----------------- 264
G+++H GF + + LV MY KN
Sbjct: 140 GKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDG 199
Query: 265 ---------------GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
G A+ LFD M +R++ +WN MISG + +G ++A+++FR+++
Sbjct: 200 EVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMK 259
Query: 310 K-EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
K E I PN +T V VL A G +++G + + GI ++D+ +CG
Sbjct: 260 KGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDS-GIRIDDVLGSALIDMYSKCGI 318
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ +A + +R+ + +V+ W A++ HG
Sbjct: 319 IEKAIMVFERLP-RENVITWSAMINGFAIHGQ 349
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 241/398 (60%), Gaps = 6/398 (1%)
Query: 41 SSRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNP 96
+ ++ D + ++++ AL +S G ++ A ++F+ I + WN +I A + N
Sbjct: 157 ARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNN 216
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ L+ M +T P++ T V+ AC+ S+ +Q+H+ + G +L +VN L
Sbjct: 217 KEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNAL 276
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ Y ++ A +F+ + + + W T+I GY EAL+LF +ML G PN
Sbjct: 277 IDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 336
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
VT+ S+L ACA G +E+G +HV++ +++G + T+L+ MY K G + A+ +F
Sbjct: 337 VTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVF 396
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
DS+ R++++WNAMI G A HG A A D+F ++ K +I P+DITFVG+LSAC H+G +D
Sbjct: 397 DSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLD 456
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+GR IF SMK Y I PK+EHYGCM+DLLG G EAEE+I M +PD V+W +LL A
Sbjct: 457 LGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKA 516
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
CK + N+E+ E + +I +EP N G YV+LSN+YA A
Sbjct: 517 CKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 554
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 271/546 (49%), Gaps = 80/546 (14%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNS 74
P LSLL + CK++ L+ IHAQMI + ++A S+L+ FC LS D L YA +F +
Sbjct: 4 PSLSLLHN-CKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
IQ PN +WNT+ R A S +P A++LY+ M G PN +TF F+LK+C+ ++
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV---------------------- 172
+QIH HV K G DLDL+V L+ Y + L +AR+V
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182
Query: 173 ---------FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
FDEI + + W MISGYA++ EAL LF +M+ P+ T+ SV+
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQS +ELG +VH ++ GF + AL+ +Y K G + A LF+ + +++
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI 302
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN +I G +EAL LF+++ + PND+T + +L AC H G I++GR I +
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI 362
Query: 344 -KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV------W--------------- 381
KR+ G+ H ++D+ +CG + A+++ ++ W
Sbjct: 363 NKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANA 422
Query: 382 -------------KPDVVMWGALLAACKNHGNIEVAE---RVVKEIIALEPN--NHGVYV 423
+PD + + LL+AC + G +++ R +KE + P ++G +
Sbjct: 423 AFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMI 482
Query: 424 VL---SNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL---TPNRST 476
L S ++ EAE M +E+ V++ L A + N + ES NL P
Sbjct: 483 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPG 542
Query: 477 PFVLLN 482
+VLL+
Sbjct: 543 SYVLLS 548
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 165/435 (37%), Positives = 247/435 (56%), Gaps = 10/435 (2%)
Query: 9 RQPPLPIPPLSL---------LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCAL 59
R+ P P LS L KC +M + KQ HA+++ D F AS L+A CAL
Sbjct: 16 REDPPQSPELSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCAL 75
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G + YA +F + F +NT++R +N ++A+ Y M G P+ T+
Sbjct: 76 SDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYP 135
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+LKAC+ + ++ Q+H H+ K GL+ D+ V N L+ Y ++ VF+++ R
Sbjct: 136 TLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNER 195
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGF-EPNSVTLASVLSACAQSGCLELGEKV 238
++ W+ +I+ +A ++ L L M EG+ L SVLSAC G L+LG V
Sbjct: 196 SVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSV 255
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H F+ + I+ T+L+ MY K G+L K LF M ++N +++ MISGLA HG+
Sbjct: 256 HGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYG 315
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
E L +F ++ ++ + P+DI +VGVL+AC HAG + G Q F MK +GIEP I+HYGC
Sbjct: 316 REGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGC 375
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
MVDL+GR GK+ EA ELIK M +P+ V+W +LL+A K H N++ E K++ L+
Sbjct: 376 MVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQK 435
Query: 419 HGVYVVLSNMYAEAE 433
YVVLSNMYA+A+
Sbjct: 436 ASDYVVLSNMYAQAQ 450
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 245/415 (59%), Gaps = 5/415 (1%)
Query: 25 CKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C M L + + A + + D F S L+ A S GD++ A +F++ +
Sbjct: 130 CSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYA--SCGDVAAARLVFDAAEESGVV 187
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
MWN ++ A + + + + ++ M G A ++ T V+ AC + K + HV
Sbjct: 188 MWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHV 247
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+ GL + +V L+ Y+ ++ AR++FD +++R + W+ MISGY Q+ + EAL
Sbjct: 248 DEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREAL 307
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
LF +M + EPN VT+ SVLSACA G LE G+ VH +V+ + + ILGTALV Y
Sbjct: 308 GLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFY 367
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + A F+SMP +N TW A+I G+A++G EAL+LF + + I P D+TF+
Sbjct: 368 AKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFI 427
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL AC H+ ++ GR+ F SM R YGI+P++EHYGCMVDLLGR G V EA + I+ M
Sbjct: 428 GVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPI 487
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+P+ V+W ALL++C H N+ + E +K+II+L P++ G YV+LSN+YA A K
Sbjct: 488 EPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWK 542
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 192/392 (48%), Gaps = 11/392 (2%)
Query: 14 PIPPLS-LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
P PP + L AD L Q+HA +I S + + L A +S L YA LF
Sbjct: 18 PAPPRAPLRADP----SYLPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLF 73
Query: 73 NSIQSP--NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA--PNQHTFTFVLKACSNV 128
P + +N L+RA + +P+ A+ L++ M A +QHT LK+CS +
Sbjct: 74 RLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRM 133
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
+L+ + + + K GL D V++ L+ Y+ D+ AR VFD + +W ++
Sbjct: 134 CALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIV 193
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+ Y ++ E + +F ML G + VTL SV++AC + G +LG+ V V G
Sbjct: 194 AAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLA 253
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
L TAL+ MY K G + KA+ LFD M R++ W+AMISG EAL LF ++
Sbjct: 254 RNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEM 313
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ ++ PND+T V VLSAC G ++ G+ + ++R I +VD +CG
Sbjct: 314 QLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTA-LVDFYAKCGC 372
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ +A E + M K + W AL+ +G
Sbjct: 373 IDDAVEAFESMPVK-NSWTWTALIKGMATNGR 403
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/377 (42%), Positives = 231/377 (61%), Gaps = 5/377 (1%)
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFT 119
S G + A +LF+ I + WN +I + N +A+ L+ M T P++ T
Sbjct: 167 SRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMV 226
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ AC+ S+ + +H+ ++ G +L +VN L+ YS ++ A ++FD + N+
Sbjct: 227 TVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNK 286
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W T+I GY EAL+LF +ML G PN VT+ S+L ACA G +++G +H
Sbjct: 287 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 346
Query: 240 VFV--KMRGFEMG-AILGTALVHMYTKNGALAKAKALFDS-MPERNIATWNAMISGLASH 295
V++ K++G + L T+L+ MY K G + A+ +FDS M R+++TWNAMISG A H
Sbjct: 347 VYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMH 406
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G A A D+F ++ I P+DITFVG+LSAC H+G +D+GR IF SM R Y I PK+EH
Sbjct: 407 GRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEH 466
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
YGCM+DLLG G EAEE+I M +PD V+W +LL ACK HGN+E+ E K++I +E
Sbjct: 467 YGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE 526
Query: 416 PNNHGVYVVLSNMYAEA 432
P N G YV+LSN+YA A
Sbjct: 527 PGNSGSYVLLSNIYAAA 543
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 220/425 (51%), Gaps = 37/425 (8%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRA 89
++ IHAQMI + ++A S+LL FC +S D YA +F++IQ PN +WNT+ R
Sbjct: 4 VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
A S +P A+ LY+ M G P+ +TF F+LK+C+ + +QIH HV K G DLD
Sbjct: 64 HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD 123
Query: 150 LHVVNCLVRCYSVSSDLNNARQV-------------------------------FDEIRN 178
++V L+ Y+ + L +AR+V FDEI
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQ-MLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ + W MISGY ++ EAL LF + M+M P+ T+ +V+SACAQS +ELG
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH ++ GF + AL+ +Y+K G + A LFD + +++ +WN +I G
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNL 303
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHY 356
+EAL LF+++ + PND+T + +L AC H G ID+GR I + K++ G+ +
Sbjct: 304 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSL 363
Query: 357 -GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--A 413
++D+ +CG + A+++ + + W A+++ HG A + +
Sbjct: 364 QTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNG 423
Query: 414 LEPNN 418
+EP++
Sbjct: 424 IEPDD 428
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 14/283 (4%)
Query: 40 ISSRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLN 95
+ S I DH AS L AL S G++ A LF+ + + + WNTLI
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNL 303
Query: 96 PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN- 154
+A+ L+ M R+G PN T +L AC+++ +++ + IH +++K + +V +
Sbjct: 304 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSL 363
Query: 155 --CLVRCYSVSSDLNNARQVFD-EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
L+ Y+ D++ A+QVFD + NR+L+ W MISG+A RAN A +F +M M G
Sbjct: 364 QTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNG 423
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKM-RGFEMGAILG--TALVHMYTKNGALA 268
EP+ +T +LSAC+ SG L+LG ++F M RG+E+ L ++ + +G
Sbjct: 424 IEPDDITFVGLLSACSHSGMLDLGR--NIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFK 481
Query: 269 KAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+A+ + ++MP E + W +++ HG+ E +KL K
Sbjct: 482 EAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK 524
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/371 (41%), Positives = 233/371 (62%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G ++YA +F+ PN FMWNT+IR + S +P AI LY +M G +PN +TF
Sbjct: 12 SPHGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFG 71
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
FVL AC + L +++H+ + K+GLD + ++N L++ Y+ ++ A +FDE+
Sbjct: 72 FVLNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEP 131
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W+TM+SGY+Q+ +A E L L +M E ++ TLASV+ C G L+LG+ VH
Sbjct: 132 DSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVH 191
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
++ G ++ +LGTALV MY+K G+L A +F M ER++ TW+ MI+G A HGH E
Sbjct: 192 SYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDE 251
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+AL LF +++ +I+PN +TF VLSA H+G ++ G QIF +M Y I P+I+HYGCM
Sbjct: 252 KALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCM 311
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDL R G V A + I+ M +P+VV+W LL ACK HG + E + ++I+ L+P++
Sbjct: 312 VDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSP 371
Query: 420 GVYVVLSNMYA 430
YV +SN+YA
Sbjct: 372 ENYVFVSNVYA 382
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 255/444 (57%), Gaps = 37/444 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF-NSIQSPNHFMWNTL 86
M Q K+ H Q+II+ + +++F AL SGD+ YA L + P F++NT
Sbjct: 1 MKQFKEAHTQLIINGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTT 60
Query: 87 IRAQASSLNPDK---AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
IR + + P ++ L++ M APN TFTF+ + CSN + + +Q H V K
Sbjct: 61 IRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIK 120
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE----------------IRN--------- 178
+ ++D+ V N ++R YSV LN+AR VFDE IRN
Sbjct: 121 NSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSL 180
Query: 179 ------RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
R W MISGYAQ+ + EAL LF +M M EPNS L SVLSAC+Q G L
Sbjct: 181 FSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGAL 240
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+ G VH ++ + + +IL AL+ MY K G++ A F + +R+++ + A ISGL
Sbjct: 241 DHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGL 300
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
A +G +EEAL LF +++ E I P+ ++++ VL AC HAG+++ G F SM V+GI P+
Sbjct: 301 AMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPE 360
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
++HY CMVDLLGR G + EAE+ + M KPD V+WGALL AC+ +GN E+ +RV ++
Sbjct: 361 LDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLV 420
Query: 413 ALEPNNHGVYVVLSNMYAEAESMK 436
+ N+ G Y++LSN+Y AESMK
Sbjct: 421 ESDQNHDGRYILLSNIY--AESMK 442
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/417 (41%), Positives = 248/417 (59%), Gaps = 13/417 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL + C SM L QI F A LL FCA S G+L++A L + +
Sbjct: 32 LSLL-NLCSSMKHLFQIRGH---------GFIAGPLLRFCASSPLGNLNHARVLLSGSEK 81
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
WN LIR+ A+ +P +AI Y+ MR G +P++ TF +LKAC+ + + N ++I
Sbjct: 82 SEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAXISAFNEGRKI 141
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
V K GLD +++V N ++ Y + +AR++FDE+ RT+ W ++S +
Sbjct: 142 QVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWL 201
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
N++ LF +M GF+P+ T+ +LSAC++ G L G VH V +G + LGTAL
Sbjct: 202 NDSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTAL 261
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K GA+ +A +F M ERN+ TW+AMI GLA HG A+EAL+LF K+++ I PN
Sbjct: 262 VDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNY 321
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+TF+GVL AC HAG +D G + F M+ V+GIEP + HYG MVD+L R G++ EA I
Sbjct: 322 VTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFIL 381
Query: 378 RMVWKPDVVMWGALLAACKNHG---NIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
M + D V+W LL+AC HG N V ++V K ++ LEP G +V+++NMYAE
Sbjct: 382 NMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAE 438
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/432 (39%), Positives = 248/432 (57%), Gaps = 9/432 (2%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS 60
+ LK ++L P L I +LLA + M H +I +D + L+ A
Sbjct: 121 LGLKPNNLTYPFLFIACSNLLAVENGRMG-----HCSVIRRGLDEDGHVSHSLITMYA-- 173
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
G + A ++F+ I + WN++I + + +A+ L+ M GF PN+ +
Sbjct: 174 RCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVS 233
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VL AC + L + V ++ + L+ + + L+ Y DL +AR++FD ++ +
Sbjct: 234 VLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKD 293
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W MI+GYAQ+ + EA+ LF M M P+ +TL +LSACA G L+LG++V +
Sbjct: 294 KVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEI 353
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+ RGF+ +GTALV MY K G+L A +F MP +N +WNAMIS LA HG A+E
Sbjct: 354 YASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQE 413
Query: 301 ALDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
AL LF+ + E + PNDITFVGVLSAC HAG +D GR++F M +G+ PKIEHY C
Sbjct: 414 ALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSC 473
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
MVDL R G + EA + + M KPD V+ GALL AC+ NI+++ERV+K ++ LEP+N
Sbjct: 474 MVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSN 533
Query: 419 HGVYVVLSNMYA 430
G YV+ S +YA
Sbjct: 534 SGNYVISSKLYA 545
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 234/427 (54%), Gaps = 24/427 (5%)
Query: 14 PIPPLSLLADK-------CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
P P L+DK C S+ QLKQIHAQ++ +S H S L L D +
Sbjct: 24 PNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSI---HKPNSFLYKIADLK---DFA 77
Query: 67 YATRLFNSIQSPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTGFAPNQHTFTFVLKAC 125
YA+ F++I P + +N +IR +++ N A+ Y M+ G PN T+ F+ AC
Sbjct: 78 YASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIAC 137
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
SN+ ++ + H V + GLD D HV + L+ Y+ + +AR+VFDEI + L W
Sbjct: 138 SNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWN 197
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+MISGY++ A EA+ LF +M+ GF+PN ++L SVL AC + G L+LG V FV
Sbjct: 198 SMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVEN 257
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
+ +G+AL+HMY K G L A+ +FDSM +++ TWNAMI+G A +G +EEA+ LF
Sbjct: 258 KMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLF 317
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ--IFGSMKRVYGIEPKIEHYGCMVDLL 363
+ + P+ IT +G+LSAC G +D+G+Q I+ S + G + + +VD+
Sbjct: 318 QDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASER---GFQDDVYVGTALVDMY 374
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII----ALEPNNH 419
+CG + A + M K +V W A+++A HG + A + K ++ + PN+
Sbjct: 375 AKCGSLDNAFRVFYGMPNKNEVS-WNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDI 433
Query: 420 GVYVVLS 426
VLS
Sbjct: 434 TFVGVLS 440
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 269/491 (54%), Gaps = 78/491 (15%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +KC SM LK +HAQ+I+ + +L++FCA+ +GDL YA R+F+ I PN
Sbjct: 120 LCEKCSSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNK 179
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS-------------- 126
FM+N+LIR ++S +P A+ L+ M +G +PN+ T FVLKAC
Sbjct: 180 FMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGL 239
Query: 127 ----NVRSL-----------------NCCKQIHTHVSK------------SGLDLDLHVV 153
+ SL +C +++ ++ +G+ +D+ V
Sbjct: 240 AIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGVKIDIIVR 299
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM------ 207
N L Y+ +L++A+ +FD + + + WT+MIS YAQ A +FDQM
Sbjct: 300 NALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVV 359
Query: 208 ---------LMEG----------------FEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
L EG P+ TL S+L+AC+Q G L +G+K+H ++
Sbjct: 360 SWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYI 419
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G L +L+ MY K G + A +F MP +N+ +WN +I LA HG EA+
Sbjct: 420 LSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAI 479
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
LF +++ + +P++IT G+LSAC H+G +D+G F M +Y + +IEHY CMVDL
Sbjct: 480 KLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACMVDL 539
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G + EA ELI RM KPDVV+WGALL AC+ HGN+E+ ++++K+++ LEP++ G+Y
Sbjct: 540 LGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLY 599
Query: 423 VVLSNMYAEAE 433
V++SN+Y EA+
Sbjct: 600 VLISNIYWEAQ 610
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/421 (38%), Positives = 257/421 (61%), Gaps = 6/421 (1%)
Query: 11 PPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYAT 69
PP PI LL KC S +L QI A I S + +D ++L+ FC S + +SYA
Sbjct: 31 PPNPI----LLISKCNSERELMQIQAYAIKSHQ-EDVSFNTKLINFCTESPTESSMSYAR 85
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
LF+++ P+ ++N++ R + S NP + L++ + P+ +TF +LKAC+ +
Sbjct: 86 HLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAK 145
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+L +Q+H K G+D +++V L+ Y+ D++ AR VFD I + + MI+
Sbjct: 146 ALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMIT 205
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GYA+ R NEAL LF +M + +PN +TL SVLS+CA G L+LG+ +H + K GF
Sbjct: 206 GYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCK 265
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ TAL+ M+ K G+L A ++F++M ++ W+AMI A+HG AE ++ +F ++
Sbjct: 266 YVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMR 325
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E + P++ITF+G+L+AC H G ++ GR+ F M +GI P I+HYG MVDLLGR G +
Sbjct: 326 SENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHL 385
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
+A E I ++ P ++W LLAAC +H N+E+AE+V + I+ L+ ++ G YV+LSN+Y
Sbjct: 386 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLY 445
Query: 430 A 430
A
Sbjct: 446 A 446
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/431 (41%), Positives = 258/431 (59%), Gaps = 23/431 (5%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDH---FAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LA+ C M QLKQ+HA + ++ + F ++L SS D++YA R+F+SI++
Sbjct: 35 LAETCSDMSQLKQLHAFTLRTTYPDEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIEN 92
Query: 78 PNHFMWNTLIRAQASSLN-PDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCK 135
+ FMWNTLIRA A ++ ++A LY M G AP++HTF FVLKAC+ + L+ K
Sbjct: 93 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESAPDKHTFPFVLKACAYIFGLSEGK 152
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H + K G D++V N L+ Y L+ AR+VFDE+ R+L W +MI +
Sbjct: 153 QVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRVG 212
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE----MGA 251
+ AL LF M + FEP+ T+ SVLSACA G L LG HVF+ +R + M
Sbjct: 213 EYDSALQLFRDM-QKSFEPDGYTMQSVLSACAGLGSLSLGTWSHVFL-LRNCDVDVAMDV 270
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
++ +L+ MY K G+L A+ +F M + ++A+WNAMI G A+HG AEEA++ F + KE
Sbjct: 271 LIKNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKE 330
Query: 312 --QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ PN +TFV +L AC H G ++ GRQ F M R YGIEP +EHYGC++DLL R G +
Sbjct: 331 GKNVKPNSVTFVALLIACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCIIDLLARAGYI 390
Query: 370 LEAEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPNNH-------GV 421
EA +++ M KPD V+W +LL A CK ++E++E + + II +N G
Sbjct: 391 TEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQSSNSNCSGA 450
Query: 422 YVVLSNMYAEA 432
YV+LS +YA A
Sbjct: 451 YVLLSRVYASA 461
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/481 (37%), Positives = 257/481 (53%), Gaps = 65/481 (13%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATRLF 72
P+P LS ++ KS+ +++Q HA M+ + D F+AS+L+AF A + +SYA +
Sbjct: 39 PVPILSF-TERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 97
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
N I SPN F N++IRA A+S P+ A+ ++ M P++++FTFVLKAC+
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV-------------------- 172
+QIH KSGL D+ V N LV Y S AR+V
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 173 -----------FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM-------------- 207
FDE+ R + W MISGYA + EA +FD M
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 208 ---------LMEGF---------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
++E F +P+ TL SVLSACA G L GE VHV++ G E+
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
L TALV MY+K G + KA +F + +R+++TWN++IS L+ HG ++AL++F ++
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E PN ITF+GVLSAC H G +D R++F M VY +EP IEHYGCMVDLLGR GK+
Sbjct: 398 YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKI 457
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EAEEL+ + ++ +LL ACK G +E AER+ ++ L + Y +SN+Y
Sbjct: 458 EEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLY 517
Query: 430 A 430
A
Sbjct: 518 A 518
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 254/438 (57%), Gaps = 39/438 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+QLKQIHA + + F +LL DL YA LF+ I P+ +++N I
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQL------PDLPYACTLFDQIPKPSVYLYNKFI 54
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ +S +P + LY M G +PNQ++FTF+ AC+++ ++ + +H+H KSG
Sbjct: 55 QTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFA 114
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D+ + L+ Y+ L +ARQ+FDE+ R + W ++I+GYA+S AL LF++M
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 208 ----------LMEGF----------------------EPNSVTLASVLSACAQSGCLELG 235
L+ G+ +PN V++ASVL AC+Q G L++G
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIG 234
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM-PERNIATWNAMISGLAS 294
+++ + + GF A + A++ ++ + G + +A+ +FD + +RN+ +WN MI GLA
Sbjct: 235 KRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAV 294
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG +AL L+ ++ ++ P+D+TFVG+L AC H G + GRQ+F SM+ + + PK+E
Sbjct: 295 HGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLE 354
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGC+VDLLGR G++ EA LI+ M PD V+WG LL AC HGN+E+ E + + L
Sbjct: 355 HYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKL 414
Query: 415 EPNNHGVYVVLSNMYAEA 432
EP N G YV+LSN+YA A
Sbjct: 415 EPWNPGNYVILSNIYALA 432
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 246/413 (59%), Gaps = 2/413 (0%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC+++ Q+KQ+HAQ+ + I D A++LL CA DL A LFN ++ + W
Sbjct: 12 KCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCA--KHKDLVTAHLLFNKMEERDPVSW 69
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+ +I + + ++ + + R G P+ + FV+KAC + L + IH+ V K
Sbjct: 70 SVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLK 129
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+GL LD V + LV Y+ ++NA+Q+FD + + L T MI+GYA+ + NE+ +L
Sbjct: 130 NGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVL 189
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
FDQM +GF P+ V + ++++ACA+ G + VH +V R + + LGTA++ MY K
Sbjct: 190 FDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAK 249
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G++ ++ +FD M ++N+ +W+AMI HG EAL+LF + I+PN ITF+ +
Sbjct: 250 CGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISL 309
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC HAG +D G Q+F M YG+ P ++HY CMVDLLGR G++ +A LI+ M +
Sbjct: 310 LYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEK 369
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
D +W A L AC+ H +++AE+ K +++L+ N G Y++LSN+YA A K
Sbjct: 370 DEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWK 422
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 144/283 (50%), Gaps = 7/283 (2%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F L C N+ + KQ+H V+ +G+ DL V N L+ + DL A +F+++
Sbjct: 6 FISTLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME 62
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R W+ MI G+ ++ F +++ G +P++ +L V+ AC + L +G
Sbjct: 63 ERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRL 122
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H V G + + + LV MY K G + AK LFD MP++++ T MI+G A G
Sbjct: 123 IHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGK 182
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHY 356
E+ LF ++ ++ VP+ + V +++AC G ++ R + + R Y ++ +E
Sbjct: 183 PNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD--VELG 240
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
M+D+ +CG + + E+ RM K +V+ W A++ A HG
Sbjct: 241 TAMIDMYAKCGSIDSSREIFDRMEQK-NVISWSAMIGAYGYHG 282
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 261/461 (56%), Gaps = 47/461 (10%)
Query: 18 LSLLADKCKSMHQLKQIHAQM----IISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN 73
LS L ++CK++ ++K IH + I+ +R Q ++ +RLL FC+ S+ +YA +F+
Sbjct: 22 LSTLIEQCKNLKEIKIIHTHILKSPILHTRDQ-YYLFTRLLYFCSFSNYASFNYANNVFH 80
Query: 74 SIQSPNHFMWNTLIRAQASSLNPD------KAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
I+ P ++N +IR+ D KA+ LY M G PN TF F++K CS
Sbjct: 81 MIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVKGCSR 140
Query: 128 VRSLNCCKQ-IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE----------- 175
++ + IH HV K G D+ V N L+ + NAR+VFDE
Sbjct: 141 LQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNS 200
Query: 176 -----IRN---------------RTLNVWTTMISGYAQSFRANEALMLFDQM-LMEG--- 211
+RN R + W ++I+G Q+ A E+L +F +M + G
Sbjct: 201 MVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDV 260
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+ +T+ASVLSACA G ++ G+ VH +++ E ++GTALV+MY K G + +A
Sbjct: 261 VKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAI 320
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ MPE++ + W AMIS A HG ++A D F ++EK + PN +TFVG+LSAC H+G
Sbjct: 321 EIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSG 380
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ GR F MKRVY IEP+I HY CMVD+L R EA LI+ M KPDV +WGAL
Sbjct: 381 LVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGAL 440
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L C+ HGNI++ E+V +I LEP+NH Y+ L ++Y +A
Sbjct: 441 LGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKA 481
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 54/333 (16%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVRC-YSVSSDLNNA 169
++T + +++ C N++ + K IHTH+ KS + D L C +S + N A
Sbjct: 19 KNTLSTLIEQCKNLKEI---KIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYA 75
Query: 170 RQVFDEIRNRTLNVWTTMISGYA------QSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
VF I+ L V+ MI Y S +ALML+ QML +G PN++T ++
Sbjct: 76 NNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLV 135
Query: 224 SACA--QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
C+ Q G +GE +H V GF +G +L+ ++ G A+ +FD M R+
Sbjct: 136 KGCSRLQYGG-TVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRD 194
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIV--------------------------- 314
+ +WN+M+ G +G E AL+LFRK+ I+
Sbjct: 195 VVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQF 254
Query: 315 --------PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
P+ IT VLSAC G ID G+ + +++ IE + +V++ G+C
Sbjct: 255 LSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRK-NDIECDVVIGTALVNMYGKC 313
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
G V +A E+ M K D W A+++ HG
Sbjct: 314 GDVQQAIEIFNDMPEK-DASAWTAMISVFALHG 345
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 16/308 (5%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG----FAPNQHT 117
+G++ A LF + N WN++I + + +++ ++ M+ P++ T
Sbjct: 208 NGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKIT 267
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
VL AC+ + S++ K +H ++ K+ ++ D+ + LV Y D+ A ++F+++
Sbjct: 268 IASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMP 327
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ + WT MIS +A +A F +M G +PN VT +LSAC+ SG +E G
Sbjct: 328 EKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRC 387
Query: 238 VH-VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASH 295
V ++ E +V + ++ +A L SMP + ++ W A++ G H
Sbjct: 388 CFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMH 447
Query: 296 GH---AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
G+ E+ LE N ++ + AG D ++I SMK GIE K
Sbjct: 448 GNIKLGEKVAHYLIDLEPH----NHAFYINLCDIYVKAGKYDAAKRIRNSMKE-RGIETK 502
Query: 353 IEHYGCMV 360
I GC +
Sbjct: 503 IP--GCSI 508
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 260/451 (57%), Gaps = 34/451 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P +S++ + C ++ +LKQIH Q++I+ + D + +A AL++ +L Y+ ++ ++
Sbjct: 11 PTISMV-EPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNS 69
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNC 133
Q+P F +N++IRA + S P ++ Y + + AP+ +TFTF+++ + + +
Sbjct: 70 QNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGT 129
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVR----------CYSVSS------------------- 164
+H K G + D HV + L+ C+ V S
Sbjct: 130 GSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAK 189
Query: 165 --DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
D+ AR++FD++ ++ W MISGY Q ++ EAL LF+ M EG + N V++ SV
Sbjct: 190 MGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSV 249
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSAC+ G L+ G H +++ M LGTAL+ MY K G + KA +F M E+N+
Sbjct: 250 LSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNV 309
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TW++ I GLA +G E+ L+LF ++++ + PN+ITFV VL C G ++ GR+ F S
Sbjct: 310 YTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFES 369
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M +VYGIEP++EHYGCMVDL GR G + EA I M +P V WGALL ACK + N+E
Sbjct: 370 MSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNME 429
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ E ++I+ LE NHG YV+LSN+YA+++
Sbjct: 430 MGELASRKIVELEAKNHGAYVLLSNIYADSK 460
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 253/424 (59%), Gaps = 4/424 (0%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
R P L+LL + C H + QI AQ+I+ + + A + C S G L A
Sbjct: 6 RLNPRVTKFLNLLTNCCSPCH-IHQIQAQLIVQNLHSNTTIAHHFITAC--QSLGLLDSA 62
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
LF P+ F+ N+LIRA + + P +Y +M PN TF F+LK+ ++
Sbjct: 63 LLLFTHHSKPHVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLADF 122
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
+ L+ + IHTHV K G D++V N L+ Y+ D+ +VFDE+ +R + WT +I
Sbjct: 123 KGLSEGQCIHTHVVKLGQFDDIYVQNSLLNVYASCGDMGLCMRVFDEMPHRDVVSWTVLI 182
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+GY + R ++AL+ F+QM G PN VT+ + LSACA G LE+G +H F++ G+E
Sbjct: 183 TGYRSAERYDDALIAFEQMQYAGVVPNHVTMVNALSACADFGALEMGVWIHEFIRRSGWE 242
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
ILGT+L+ MY K G + + +F SM E+N+ TWN++I GLA EA+ F ++
Sbjct: 243 FDVILGTSLIDMYGKCGRIEEGLVVFRSMKEKNVFTWNSLIKGLALARSGAEAVWWFYRM 302
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYGCMVDLLGRCG 367
E+E I +++T + VL AC H+G + +GRQIFGS M Y P ++HY C++DLL R G
Sbjct: 303 EQEGIKADEVTLIAVLCACSHSGMVQMGRQIFGSLMNGKYEFFPGVKHYACVIDLLARAG 362
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
+ EA E++ RM ++P+ VMWGA LA C+ HG++E++E ++++ LEP N YV+LSN
Sbjct: 363 ILQEAMEVMTRMPFEPNKVMWGAFLAGCRAHGDLELSEFAARKLVELEPGNGAYYVLLSN 422
Query: 428 MYAE 431
+YAE
Sbjct: 423 IYAE 426
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 245/424 (57%), Gaps = 7/424 (1%)
Query: 12 PLPIPPLSLLADKCKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
P + +S+L C S LK QI +I + D + LL+ A G L A
Sbjct: 411 PNRVTFMSILG-ACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA--KCGSLKDA 467
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R+F I N WN +I A D A+ + + + G PN TFT +L C +
Sbjct: 468 HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
SL K +H + K+GL+ DLHV N LV + DL +A+ +F+++ R L W T+I
Sbjct: 528 DSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTII 587
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+G+ Q + A F M G +P+ +T +L+ACA L G ++H + F+
Sbjct: 588 AGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFD 647
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
++GT L+ MYTK G++ A +F +P++N+ +W +MI+G A HG +EAL+LF ++
Sbjct: 648 CDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQM 707
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
++E + P+ ITFVG LSAC HAG I+ G F SMK + IEP++EHYGCMVDL GR G
Sbjct: 708 QQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGL 766
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EA E I +M +PD +WGALL AC+ H N+E+AE+ ++ + L+PN++GV+V+LSN+
Sbjct: 767 LNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNI 826
Query: 429 YAEA 432
YA A
Sbjct: 827 YAAA 830
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 214/397 (53%), Gaps = 8/397 (2%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G+ A ++F+ ++ + + WN L+ ++A L+ M + P++ TF
Sbjct: 156 AKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFV 215
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L AC++ R+++ ++++ + K+G D DL V L+ + D+ +A +VFD + R
Sbjct: 216 SMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR 275
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L WT+MI+G A+ R +A LF +M EG +P+ V S+L AC LE G+KVH
Sbjct: 276 DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVH 335
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+K G++ +GTA++ MYTK G++ A +FD + RN+ +W AMI+G A HG +
Sbjct: 336 ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRID 395
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV-YGIEPKIEHYGC 358
EA F K+ + I PN +TF+ +L AC + G+QI + YG + ++
Sbjct: 396 EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TA 453
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEP 416
++ + +CG + +A + +++ K +VV W A++ A H + A + ++ ++P
Sbjct: 454 LLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512
Query: 417 NNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLAS 453
N+ + + N+ ++S+++ + + ++ AGL S
Sbjct: 513 NS-STFTSILNVCKSSDSLELGKWVHFL-IMKAGLES 547
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 197/390 (50%), Gaps = 6/390 (1%)
Query: 12 PLPIPPLSLL--ADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P + +SLL + +++ Q K++HA+M + + + +L+ + G + A
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSM--YTKCGSMEDAL 367
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+F+ ++ N W +I A D+A + M +G PN+ TF +L ACS+
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+L +QI H+ ++G D V L+ Y+ L +A +VF++I + + W MI+
Sbjct: 428 ALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMIT 487
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
Y Q + + AL F +L EG +PNS T S+L+ C S LELG+ VH + G E
Sbjct: 488 AYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLES 547
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ ALV M+ G L AK LF+ MP+R++ +WN +I+G HG + A D F+ ++
Sbjct: 548 DLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQ 607
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ I P+ ITF G+L+AC + GR++ + + + ++ + +CG +
Sbjct: 608 ESGIKPDKITFTGLLNACASPEALTEGRRLHALITEA-AFDCDVLVGTGLISMYTKCGSI 666
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+A ++ ++ K +V W +++ HG
Sbjct: 667 EDAHQVFHKLP-KKNVYSWTSMITGYAQHG 695
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 180/305 (59%), Gaps = 4/305 (1%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T++ +L+ C ++L ++I+ H+ KSG+ D+ + N L+ Y+ + +A+Q+FD
Sbjct: 110 RQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFD 169
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
++R + + W ++ GY Q EA L +QM+ + +P+ T S+L+ACA + ++
Sbjct: 170 DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G +++ + G++ +GTAL++M+ K G + A +FD++P R++ TW +MI+GLA
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG ++A +LF+++E+E + P+ + FV +L AC H ++ G+++ MK V G + +I
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIY 348
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-- 412
++ + +CG + +A E+ +V +VV W A++A HG I+ A ++I
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFD-LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407
Query: 413 ALEPN 417
+EPN
Sbjct: 408 GIEPN 412
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 109/207 (52%), Gaps = 2/207 (0%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
NEA+ + +++ + T +++L C + L GE+++ +K G + + L
Sbjct: 92 NEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTL 151
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
++MY K G AK +FD M E+++ +WN ++ G HG EEA L ++ ++ + P+
Sbjct: 152 INMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
TFV +L+AC A +D GR+++ + + G + + ++++ +CG + +A ++
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKA-GWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + D+V W +++ HG + A
Sbjct: 271 NLPTR-DLVTWTSMITGLARHGRFKQA 296
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
NA+++ L+ G EA+ + +++ I T+ +L C + G +I+ +K+
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
G++P I + ++++ +CG + A+++ M K DV W LL HG E A
Sbjct: 139 S-GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREK-DVYSWNLLLGGYVQHGLYEEAF 196
Query: 406 RVVKEII--ALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
++ ++++ +++P+ +V + N A+A ++ E+
Sbjct: 197 KLHEQMVQDSVKPDKR-TFVSMLNACADARNVDKGREL 233
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/412 (40%), Positives = 255/412 (61%), Gaps = 5/412 (1%)
Query: 27 SMHQLKQIHAQMIISS-RIQDHFAASRLLAF-CALSSSGDLSYATRLFNSIQSP-NHFMW 83
S+ +L+QIHA I I D L+ + +L S +SYA ++F+ I+ P N F+W
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
NTLIR A N A LY MR +G P+ HT+ F++KA + + + + IH+ V
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+SG ++V N L+ Y+ D+ +A +VFD++ + L W ++I+G+A++ + EAL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
L+ +M +G +P+ T+ S+LSACA+ G L LG++VHV++ G L+ +Y
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFV 321
+ G + +AK LFD M ++N +W ++I GLA +G +EA++LF+ +E E ++P +ITFV
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
G+L AC H G + G + F M+ Y IEP+IEH+GCMVDLL R G+V +A E IK M
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+P+VV+W LL AC HG+ ++AE +I+ LEPN+ G YV+LSNMYA +
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/438 (36%), Positives = 255/438 (58%), Gaps = 31/438 (7%)
Query: 24 KCKSMHQLKQIHAQMII-------------------------SSRIQDHFAASRLLAFCA 58
K K+ + KQIHAQ++ + ++ D + ++++ A
Sbjct: 90 KSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTA 149
Query: 59 L----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
+ +S G++ A ++F+ I + WN +I A +A+ L+ M + P+
Sbjct: 150 MITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPD 209
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T VL C++ ++ +QIH+ + G +L +VN L+ YS ++ A +F+
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
++ + + W T+I GYA EAL++F +ML G PN VT+ S+L ACA G +++
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329
Query: 235 GEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
G +HV++ K++G L T+L+ MY K G + A +FD++ +++++ NAMI G
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
A HG A+ A DL +++K+ I P+DITFVG+LSAC HAG D+GR+IF SM Y IEPK
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPK 449
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+EHYGCM+DLLGR G EAEELI M +PD V+WG+LL ACK H N+E+ E + ++++
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLM 509
Query: 413 ALEPNNHGVYVVLSNMYA 430
+EP N G YV+LSN+YA
Sbjct: 510 KIEPKNPGSYVLLSNIYA 527
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 250/514 (48%), Gaps = 79/514 (15%)
Query: 48 FAASRLLAFCALSSS-GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM 106
+A S+LL FC L+ L YA +F SIQ PN WNT+IR A S +P A+ LY+ M
Sbjct: 10 YALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYM 69
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS-- 164
G +PN +TF F+ K+C+ ++ KQIH + K GL +DLHV L+ Y+ +
Sbjct: 70 ISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIV 129
Query: 165 -----------------------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+++ A+++FDEI + + W MISGYA+
Sbjct: 130 EDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIG 189
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
R EAL LF++M+ +P+ T+A+VLS C SG +ELG ++H ++ GF L
Sbjct: 190 RYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVN 249
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
AL+ +Y+K G + +A LF+ + +++ +WN +I G A H +EAL +F+++ K P
Sbjct: 250 ALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETP 309
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
ND+T + +L AC H G ID+GR I + K++ GI ++D+ +CG + A +
Sbjct: 310 NDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQ 369
Query: 375 -------------------------------LIKRMV---WKPDVVMWGALLAACKNHGN 400
L+ RM +PD + + LL+AC + G
Sbjct: 370 VFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGL 429
Query: 401 IEVAERVVKEII---ALEPN--NHGVYVVL---SNMYAEAESMKMQLEILLVQVLFAGLA 452
++ ++ K + +EP ++G + L S ++ EAE + + + V++ L
Sbjct: 430 SDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489
Query: 453 SAADILQNPDF----ESPPTNLTPNRSTPFVLLN 482
A I +N + + P +VLL+
Sbjct: 490 KACKIHKNLELGELIAQKLMKIEPKNPGSYVLLS 523
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 245/424 (57%), Gaps = 7/424 (1%)
Query: 12 PLPIPPLSLLADKCKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
P + +S+L C S LK QI +I + D + LL+ A G L A
Sbjct: 411 PNRVTFMSILG-ACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYA--KCGSLKDA 467
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R+F I N WN +I A D A+ + + + G PN TFT +L C +
Sbjct: 468 HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
SL K +H + K+GL+ DLHV N LV + DL +A+ +F+++ R L W T+I
Sbjct: 528 DSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTII 587
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+G+ Q + A F M G +P+ +T +L+ACA L G ++H + F+
Sbjct: 588 AGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFD 647
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
++GT L+ MYTK G++ A +F +P++N+ +W +MI+G A HG +EAL+LF ++
Sbjct: 648 CDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQM 707
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
++E + P+ ITFVG LSAC HAG I+ G F SMK + IEP++EHYGCMVDL GR G
Sbjct: 708 QQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGL 766
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EA E I +M +PD +WGALL AC+ H N+E+AE+ ++ + L+PN++GV+V+LSN+
Sbjct: 767 LNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNI 826
Query: 429 YAEA 432
YA A
Sbjct: 827 YAAA 830
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 214/397 (53%), Gaps = 8/397 (2%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G+ A ++F+ ++ + + WN L+ ++A L+ M + P++ TF
Sbjct: 156 AKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFV 215
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L AC++ R+++ ++++ + K+G D DL V L+ + D+ +A +VFD + R
Sbjct: 216 SMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR 275
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L WT+MI+G A+ R +A LF +M EG +P+ V S+L AC LE G+KVH
Sbjct: 276 DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVH 335
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+K G++ +GTA++ MYTK G++ A +FD + RN+ +W AMI+G A HG +
Sbjct: 336 ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRID 395
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV-YGIEPKIEHYGC 358
EA F K+ + I PN +TF+ +L AC + G+QI + YG + ++
Sbjct: 396 EAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TA 453
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEP 416
++ + +CG + +A + +++ K +VV W A++ A H + A + ++ ++P
Sbjct: 454 LLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512
Query: 417 NNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLAS 453
N+ + + N+ ++S+++ + + ++ AGL S
Sbjct: 513 NS-STFTSILNVCKSSDSLELGKWVHFL-IMKAGLES 547
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 198/390 (50%), Gaps = 6/390 (1%)
Query: 12 PLPIPPLSLL--ADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P + +SLL + +++ Q K++HA+M + + + +L+ + G + A
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSM--YTKCGSMEDAL 367
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+F+ ++ N W +I A D+A + M +G PN+ TF +L ACS+
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+L +QI H+ ++G D V L+ Y+ L +A +VF++I + + W MI+
Sbjct: 428 ALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMIT 487
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
Y Q + + AL F +L EG +PNS T S+L+ C S LELG+ VH + G E
Sbjct: 488 AYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLES 547
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ ALV M+ G L AK LF+ MP+R++ +WN +I+G HG + A D F+ ++
Sbjct: 548 DLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQ 607
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ I P+ ITF G+L+AC + GR++ + + + ++ + +CG +
Sbjct: 608 ESGIKPDKITFTGLLNACASPEALTEGRRLHALITEA-AFDCDVLVGTGLISMYTKCGSI 666
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+A ++ ++ K +V W +++A HG
Sbjct: 667 EDAHQVFHKLP-KKNVYSWTSMIAGYAQHG 695
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 180/305 (59%), Gaps = 4/305 (1%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T++ +L+ C ++L ++I+ H+ KSG+ D+ + N L+ Y+ + +A+Q+FD
Sbjct: 110 RQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFD 169
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
++R + + W ++ GY Q EA L +QM+ + +P+ T S+L+ACA + ++
Sbjct: 170 DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G +++ + G++ +GTAL++M+ K G + A +FD++P R++ TW +MI+GLA
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG ++A +LF+++E+E + P+ + FV +L AC H ++ G+++ MK V G + +I
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEV-GWDTEIY 348
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-- 412
++ + +CG + +A E+ +V +VV W A++A HG I+ A ++I
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFD-LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407
Query: 413 ALEPN 417
+EPN
Sbjct: 408 GIEPN 412
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 109/207 (52%), Gaps = 2/207 (0%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
NEA+ + +++ + T +++L C + L GE+++ +K G + + L
Sbjct: 92 NEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTL 151
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
++MY K G AK +FD M E+++ +WN ++ G HG EEA L ++ ++ + P+
Sbjct: 152 INMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
TFV +L+AC A +D GR+++ + + G + + ++++ +CG + +A ++
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKA-GWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + D+V W +++ HG + A
Sbjct: 271 NLPTR-DLVTWTSMITGLARHGRFKQA 296
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
NA+++ L+ G EA+ + +++ I T+ +L C + G +I+ +K+
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
G++P I ++++ +CG + A+++ M K DV W LL HG E A
Sbjct: 139 S-GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREK-DVYSWNLLLGGYVQHGLYEEAF 196
Query: 406 RVVKEII--ALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
++ ++++ +++P+ +V + N A+A ++ E+
Sbjct: 197 KLHEQMVQDSVKPDKR-TFVSMLNACADARNVDKGREL 233
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 262/459 (57%), Gaps = 35/459 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L+ +A+ C +M LK IHA+ ++ +++ F A+S +G L YA RLF+ I
Sbjct: 244 LASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQ 303
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS----LNC 133
PN F +NTLIR + S +P +++ L+ MRR P+ TFTF+LK S +R +
Sbjct: 304 PNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVA 363
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSV------------------------------- 162
+IH V K G L V+N L+ Y+
Sbjct: 364 SDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVR 423
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+ +L ARQVFDE+ R + WT M+SGYAQ+ R+ EAL LF +M G P+ V + V
Sbjct: 424 AGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIV 483
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
+SAC G LE G +VH ++ GF L AL+ MY K G + A +F++M +++
Sbjct: 484 ISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSL 543
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TWN+MIS A+HG+AE+A +F + I P+ +TF+ +L+A H G++D G +F S
Sbjct: 544 ITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYGLFES 603
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+R YG+E +EHYGCMVD+LGR G++ EA +LI M + V+WGALLAAC+ +G++E
Sbjct: 604 MQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVE 663
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
+ ERV+K++I L+P+ G Y++L ++Y A +E+
Sbjct: 664 MGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIEL 702
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 213/478 (44%), Gaps = 90/478 (18%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L+ +A+ C +M LK IHA+ ++ +++ F A+S +G L YA RLF+ I
Sbjct: 90 LASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQ 149
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR-------- 129
PN F +NTLIR + S +P +++ L+ MRR P+ TFTF+LK S +R
Sbjct: 150 PNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVA 209
Query: 130 -------------------------------------------SLNCCKQIHTHVSKSGL 146
++ K IH ++ L
Sbjct: 210 SDEIHGAGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANL 269
Query: 147 DLDLHVVNCLVRCYSVSSD--LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
V+ + R +VS + L+ A ++F +I + T+I GY++S ++++ LF
Sbjct: 270 HNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLF 329
Query: 205 DQMLMEGFEPNSVTLASVLSACAQ---------------SGCLELGEKVHVFV------- 242
+QM +P+ T +L ++ L+LG H+FV
Sbjct: 330 NQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHL 389
Query: 243 -KMRGFEMGA------------ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
RG A + + LV + + G L A+ +FD MPER++ +W M+
Sbjct: 390 YAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMV 449
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
SG A + EAL+LFR++ + P+++ V V+SAC G ++ G ++ + G
Sbjct: 450 SGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDE-NGF 508
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
+ ++D+ +CG + A ++ M + ++ W ++++AC NHGN E A RV
Sbjct: 509 GWMVSLCNALIDMYAKCGCMDLAWQVFNNME-RKSLITWNSMISACANHGNAEDAFRV 565
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 264/430 (61%), Gaps = 6/430 (1%)
Query: 27 SMHQLKQIHAQMIISS-RIQDHFAASRLLAF-CALSSSGDLSYATRLFNSIQSP-NHFMW 83
S+ +L+QIHA I I D L+ + +L S +SYA ++F+ I+ P N F+W
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
NTLIR A N A LY MR +G P+ HT+ F++KA + + + + IH+ V
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+SG ++V N L+ Y+ D+ +A +VFD++ + L W ++I+G+A++ + EAL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
L+ +M +G +P+ T+ S+LSACA+ G L LG++VHV++ G L+ +Y
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFV 321
+ G + +AK LFD M ++N +W ++I GLA +G +EA++LF+ +E E ++P +ITFV
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
G+L AC H G + G + F M+ Y IEP+IEH+GCMVDLL R G+V +A E IK M
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
+P+VV+W LL AC HG+ ++AE +I+ LEPN+ G YV+LSNMYA +E ++
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA-SEQRWSDVQK 447
Query: 442 LLVQVLFAGL 451
+ Q+L G+
Sbjct: 448 IRKQMLRDGV 457
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 165/413 (39%), Positives = 237/413 (57%), Gaps = 3/413 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ + ++H + + I D S + G + A LF+ + + WN +
Sbjct: 539 ALEWVNEVHKHAVETGLISDFRVGSAFIHM--YIRCGSIDDARLLFDKLSVRHVTTWNAM 596
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I A +A+ L++ M+R GF P+ TF +L A + +L K++H+H + +GL
Sbjct: 597 IGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL 656
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+DL V N LV YS ++ A+QVFD++ R + WT MI G AQ ++A F Q
Sbjct: 657 -VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQ 715
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
ML EG P++ T S+LSACA +G LE ++VH G +G ALVHMY K G+
Sbjct: 716 MLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGS 775
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A+++FD M ER++ +W MI GLA HG EALD F K++ E PN ++V VL+A
Sbjct: 776 IDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTA 835
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG +D GR+ F SM + YGIEP +EHY CMVDLLGR G + EAE I M +PD
Sbjct: 836 CSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDA 895
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQL 439
WGALL AC +GN+E+AE KE + L+P + YV+LSN+YA + +L
Sbjct: 896 PWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKL 948
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 193/377 (51%), Gaps = 20/377 (5%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+H +I S Q+ + A++LL G L A ++F+ + N ++W T+I A
Sbjct: 138 KQVHVCIIKSGMEQNLYVANKLLR--VYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYA 195
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + A+ +Y MR+ PN+ T+ +LKAC +L K+IH H+ +SG D+
Sbjct: 196 EYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVR 255
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V LV Y + +A+ +FD++ R + WT MI G A R EA LF QM EG
Sbjct: 256 VETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREG 315
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F PNS T S+L+A A +G LE ++VH G + +G ALVHMY K+G++ A+
Sbjct: 316 FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDAR 375
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M ER+I +W MI GLA HG +EA LF ++++ +PN T++ +L+A A
Sbjct: 376 VVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAS 435
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL---------LGRCGKVLEAEELIKRMVWK 382
+++ V + E G + DL +CG + +A + M
Sbjct: 436 --------TSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMC-D 486
Query: 383 PDVVMWGALLAACKNHG 399
DV+ W A++ +G
Sbjct: 487 RDVISWNAMMGGLAQNG 503
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 161/293 (54%), Gaps = 2/293 (0%)
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
+ G A + ++ +L+ C + KQ+H + KSG++ +L+V N L+R Y L
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
ARQVFD++ + + +WTTMI GYA+ A +A+ ++D+M E +PN +T S+L AC
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
L+ G+K+H + GF+ + TALV+MY K G++ A+ +FD M ERN+ +W
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
MI GLA +G +EA LF ++++E +PN T+V +L+A AG ++ +++
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA- 349
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
G+ + +V + + G + +A + M + D+ W ++ HG
Sbjct: 350 GLALDLRVGNALVHMYAKSGSIDDARVVFDGMT-ERDIFSWTVMIGGLAQHGR 401
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 186/375 (49%), Gaps = 7/375 (1%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ +K++H+ + + D + L+ A SG + A +F+ + + F W +
Sbjct: 335 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYA--KSGSIDDARVVFDGMTERDIFSWTVM 392
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS--NVRSLNCCKQIHTHVSKS 144
I A +A L++ M+R G PN T+ +L A + + +L K +H H ++
Sbjct: 393 IGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEA 452
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G DL + N L+ Y+ +++AR VFD + +R + W M+ G AQ+ +EA +F
Sbjct: 453 GFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVF 512
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
QM EG P+S T S+L+ + LE +VH G +G+A +HMY +
Sbjct: 513 LQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRC 572
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ A+ LFD + R++ TWNAMI G A EAL LF ++++E +P+ TF+ +L
Sbjct: 573 GSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINIL 632
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
SA ++ +++ ++ ++ + +V +CG V A+++ MV + +
Sbjct: 633 SANVDEEALEWVKEVHSHATDAGLVDLRVGN--ALVHTYSKCGNVKYAKQVFDDMV-ERN 689
Query: 385 VVMWGALLAACKNHG 399
V W ++ HG
Sbjct: 690 VTTWTMMIGGLAQHG 704
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 257/443 (58%), Gaps = 8/443 (1%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
LK L+ P L + + + K H + + D + L+ A
Sbjct: 119 LKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYA--RC 176
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++ +A ++F+ + + WN++I + +AI L+M MR GF P++ T VL
Sbjct: 177 GEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVL 236
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC ++ L + + V + ++++ ++ + L+ Y DL +AR+VFD + N+ +
Sbjct: 237 GACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVV 296
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +I+GYAQ+ +NEA++LF+ M G P+ VT+ VLSAC+ G L+LG+ V
Sbjct: 297 TWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHA 356
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+G + + +AL+ MY K G+L A +F+SMP +N +WNAMIS LA HG A+EAL
Sbjct: 357 SEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEAL 416
Query: 303 DLFRKLEKEQ--IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
LFR++ K+ + PNDITF+GVLSAC HAG +D GRQ+F SM +G+ PK+EHY CMV
Sbjct: 417 SLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMV 476
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
DL R G + EA +LIK+M KPD ++ G+LL AC+ N +V ERV++ + +E +N G
Sbjct: 477 DLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSG 536
Query: 421 VYVVLSNMYAEA----ESMKMQL 439
YV+ S +YA +S KM++
Sbjct: 537 NYVISSKIYANMRRWDDSAKMRV 559
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 235/411 (57%), Gaps = 13/411 (3%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +CKS + LKQIHAQM+I+S + +F S+++ DL+YA+ +FN + PN
Sbjct: 39 LIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDL------KDLAYASLVFNQLTKPNI 92
Query: 81 FMWNTLIRAQASSLNP-DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+ +N ++R A++ D + LY ++ G N T+ F+ AC NVR L K H
Sbjct: 93 YAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHC 152
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
V K+GLD D +V + L+ Y+ ++ AR+VFDE+ +R L W +MISGY++ E
Sbjct: 153 LVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKE 212
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
A+ LF +M EGFEP+ +TL SVL AC G L LG V FV + E+ + +G+AL+
Sbjct: 213 AIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALID 272
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G L A+ +FDSMP +++ TWNA+I+G A +G + EA+ LF + + P+ +T
Sbjct: 273 MYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVT 332
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+ VLSAC G +D+G+ + + G++ + ++D+ +CG + +A + + M
Sbjct: 333 MIEVLSACSTIGALDLGKWV-ETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESM 391
Query: 380 VWKPDVVMWGALLAACKNHGNIEVA----ERVVKEIIALEPNNHGVYVVLS 426
K +V W A+++A HG + A R+ K+ ++PN+ VLS
Sbjct: 392 PHKNEVS-WNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLS 441
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/435 (38%), Positives = 243/435 (55%), Gaps = 37/435 (8%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+HA M++ S+++AF A SSGD+ + +FN I P+ ++N++IRA A
Sbjct: 91 QVHAHMLLRGLQPTALVGSKMVAFYA--SSGDIDSSVSVFNGIGEPSSLLFNSMIRAYAR 148
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
++ + Y +M GF + TF FVLK+ + S+ K +H + + GL DL+V
Sbjct: 149 YGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYV 208
Query: 153 VNCLVRCYSVSSDLNNARQVFDE--IRN-----------------------------RTL 181
L+ Y ++N+A +VFD IR+ R +
Sbjct: 209 ATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI 268
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLME--GFEPNSVTLASVLSACAQSGCLELGEKVH 239
WTTMISGY+QS A +AL LFD+M+ E G PN VT+ SVL ACAQ LE G ++H
Sbjct: 269 VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIH 328
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP--ERNIATWNAMISGLASHGH 297
G A + AL MY K G+L A+ FD + E+N+ WN MI+ AS+GH
Sbjct: 329 ELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH 388
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+A+ FR++ + I P+DITF G+LS C H+G +DVG + F M Y I P++EHY
Sbjct: 389 GLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYA 448
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
C+ DLLGR G++ EA +L+ M +WG+LLAAC+ H N+E+AE +++ LEP
Sbjct: 449 CVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPE 508
Query: 418 NHGVYVVLSNMYAEA 432
N G YV+LSNMYAEA
Sbjct: 509 NTGNYVLLSNMYAEA 523
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 37/342 (10%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P ++ V + + + L Q+H H+ GL V + +V Y+ S D++++ V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
F+ I + ++ +MI YA+ A + + M GF + T VL + + +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA----- 287
+G+ VH + G + + T+L+ +Y K G + A +FD+M R++++WNA
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247
Query: 288 --------------------------MISGLASHGHAEEALDLFRKLEKEQ--IVPNDIT 319
MISG + G A++AL LF ++ KE + PN +T
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+ VL AC ++ GRQI R+ G+ + + +CG +++A ++
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRM-GLNSNASVLIALTAMYAKCGSLVDARNCFDKL 366
Query: 380 VW-KPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
+ +++ W ++ A ++G+ A +E+I ++P++
Sbjct: 367 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDD 408
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 12/297 (4%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L +L KC ++ ++ M I +D + + LLA + SG + A +F +
Sbjct: 212 LIILYGKCGEINDAGKVFDNMTI----RDVSSWNALLA--GYTKSGCIDAALAIFERMPW 265
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRR--TGFAPNQHTFTFVLKACSNVRSLNCCK 135
N W T+I + S +A+ L+ M + +G PN T VL AC+ + +L +
Sbjct: 266 RNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGR 325
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-RN-RTLNVWTTMISGYAQ 193
QIH + GL+ + V+ L Y+ L +AR FD++ RN + L W TMI+ YA
Sbjct: 326 QIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYAS 385
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+A+ F +M+ G +P+ +T +LS C+ SG +++G K + +
Sbjct: 386 YGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVE 445
Query: 254 GTALV-HMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKL 308
A V + + G LA+A L MP + W ++++ H + E A RKL
Sbjct: 446 HYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKL 502
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 155/389 (39%), Positives = 245/389 (62%), Gaps = 7/389 (1%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQH 116
A + G ++ A ++F+ I + WN++I A + +A+ ++ M RR GF P++
Sbjct: 166 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 225
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
+ +L AC + L + + V + G+ L+ ++ + L+ Y+ +L +AR++FD +
Sbjct: 226 SLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGM 285
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
R + W +ISGYAQ+ A+EA++LF M + N +TL +VLSACA G L+LG+
Sbjct: 286 AARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGK 345
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++ + RGF+ + TAL+ MY K+G+L A+ +F MP++N A+WNAMIS LA+HG
Sbjct: 346 QIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHG 405
Query: 297 HAEEALDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
A+EAL LF+ + E PNDITFVG+LSAC HAG +D G ++F M ++G+ PKIE
Sbjct: 406 KAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIE 465
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HY CMVDLL R G + EA +LI++M KPD V GALL AC++ N+++ ERV++ I+ +
Sbjct: 466 HYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEV 525
Query: 415 EPNNHGVYVVLSNMYAE----AESMKMQL 439
+P+N G Y++ S +YA +S +M+L
Sbjct: 526 DPSNSGNYIISSKIYANLNMWEDSARMRL 554
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 219/392 (55%), Gaps = 13/392 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ- 76
L LA +C S L+Q+H QM+++S I H + LL+ + Y++ LF+ I
Sbjct: 27 LVFLAKQCSSTKTLQQVHTQMVVNSSI--HTPNNHLLS--KAIHLKNFPYSSLLFSHIAP 82
Query: 77 SPNHFMWNTLIRAQASSL-NPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
PN + +N +IRA ++ N A+ L+ M P+ TF F +C+N+ SL+
Sbjct: 83 HPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHAC 142
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
H+ + K L D H + L+ Y+ + +AR+VFDEI +R W +MI+GYA++
Sbjct: 143 AAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAG 202
Query: 196 RANEALMLFDQM-LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
A EA+ +F +M +GFEP+ ++L S+L AC + G LELG V FV RG + + +G
Sbjct: 203 CAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIG 262
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+AL+ MY K G L A+ +FD M R++ TWNA+ISG A +G A+EA+ LF ++++ +
Sbjct: 263 SALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVT 322
Query: 315 PNDITFVGVLSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
N IT VLSAC G +D+G+QI + S + G + I ++D+ + G + A
Sbjct: 323 ANKITLTAVLSACATIGALDLGKQIDEYASQR---GFQHDIFVATALIDMYAKSGSLDNA 379
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + K M K + W A+++A HG + A
Sbjct: 380 QRVFKDMPQKNEAS-WNAMISALAAHGKAKEA 410
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 240/441 (54%), Gaps = 32/441 (7%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLL-------------------------AFCA 58
K + H+ KQ+HA ++ + F + L+ +F A
Sbjct: 140 KIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTA 199
Query: 59 L----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
L +S G L A LF+ I + WN +I A S ++A+ + MRR PN
Sbjct: 200 LITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPN 259
Query: 115 QHTFTFVLKACSNV-RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
T VL AC+ SL + + + GL ++ +VN L+ Y DL A +F
Sbjct: 260 VSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLF 319
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
++I+++ + W MI GY EAL LF +M+ +PN VT S+L ACA G L+
Sbjct: 320 EKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALD 379
Query: 234 LGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LG+ VH +V M+ + L T+L+ MY K G LA AK +FD M +++ATWNAMISG
Sbjct: 380 LGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISG 439
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HGH + AL LF ++ E VP+DITFVGVL+AC HAG + +GR+ F SM + Y + P
Sbjct: 440 FAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSP 499
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
K+ HYGCM+DL GR G EAE L+K M KPD +W +LL AC+ H IE+AE V K +
Sbjct: 500 KLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHL 559
Query: 412 IALEPNNHGVYVVLSNMYAEA 432
LEP N YV+LSN+YA A
Sbjct: 560 FELEPENPSAYVLLSNIYAGA 580
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 240/431 (55%), Gaps = 39/431 (9%)
Query: 11 PPLPI----PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
PP + P L+LL++ CK++ LKQIH+Q+I + HFA S+L+ FCA+S GDLS
Sbjct: 21 PPYKLVHDHPSLTLLSN-CKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLS 79
Query: 67 YATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
YA LF +I++PNH +WN +IR +SS +P A+ Y++M +G PN++TF + K+C+
Sbjct: 80 YALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCT 139
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN------------------ 168
+R + KQ+H HV K GL+ + V L+ Y+ + +L N
Sbjct: 140 KIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTA 199
Query: 169 -------------ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
AR++FDEI R + W MISGYAQS R EA+ F++M PN
Sbjct: 200 LITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPN 259
Query: 216 SVTLASVLSACAQSG-CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
T+ SVLSACAQSG L+LG V +++ RG L L+ MY K G L +A LF
Sbjct: 260 VSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLF 319
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
+ + ++N+ +WN MI G +EAL LFR++ + I PND+TF+ +L AC + G +D
Sbjct: 320 EKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALD 379
Query: 335 VGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
+G+ + + K + ++ + + ++D+ +CG + A+ + M K + W A+++
Sbjct: 380 LGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWNAMIS 438
Query: 394 ACKNHGNIEVA 404
HG+ + A
Sbjct: 439 GFAMHGHTDTA 449
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 261/459 (56%), Gaps = 35/459 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L+ +A+ C +M LK IHA ++ +++ F A+S +G L YA RLF+ I
Sbjct: 185 LASMAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQ 244
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS----LNC 133
PN F +NTLIR + S +P +++ L+ MRR P+ TFTF+LK S +R +
Sbjct: 245 PNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVA 304
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSV------------------------------- 162
+IH V K G L V+N L+ Y+
Sbjct: 305 SDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVR 364
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+ +L ARQVF E+ R + WT M+SGYAQ+ R+ EAL LF +M G P+ V + SV
Sbjct: 365 AGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSV 424
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
+SAC G LE G +VH ++ GF L AL+ MY K G + A +F++M +++
Sbjct: 425 ISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSL 484
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TWN+MIS A+HG+AE+A +F + I P+ +TF+ +L+A H G++D G +F S
Sbjct: 485 ITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFES 544
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+R YG+E +EHYGCMVD+LGR G++ EA +LI M + V+WGALLAAC+ +G++E
Sbjct: 545 MQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVE 604
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
+ ERV+K++I L+P+ G Y++L ++Y A +E+
Sbjct: 605 MGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIEL 643
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 120/301 (39%), Gaps = 57/301 (18%)
Query: 184 WTTMISGYAQSFRANEALMLFDQM----------LMEGFE-------------------P 214
WT M+S YAQ+ R+ E L LF ++ + G + P
Sbjct: 121 WTVMVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYDKYKTLKSYISNKVMHMLP 180
Query: 215 NSVTLASVLSACAQSGCLELGEKV--------HVFVKMRGFEMGAILGTALVHMYTKNGA 266
S +LAS+ AC L+L + H V + F A+ + NG
Sbjct: 181 TSQSLASMAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAV---------SPNGC 231
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L A LF + + N +N +I G + +++ LF ++ + + P+ TF +L
Sbjct: 232 LHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKG 291
Query: 327 CCHAG----FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
I +I G++ ++ G + ++ L G A ++ MV
Sbjct: 292 RSRMRIDLPLIVASDEIHGAVLKL-GFCFHLFVMNALIHLYAARGVPAAAHQVFNEMV-G 349
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV-YVVLSNMYAEAESMKMQLEI 441
DVV W L+ A G +E+A +V E+ P V + V+ + YA+A+ + LE+
Sbjct: 350 ADVVSWSGLVVAHVRAGELELARQVFYEM----PERDVVSWTVMVSGYAQAKRSREALEL 405
Query: 442 L 442
Sbjct: 406 F 406
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 259/453 (57%), Gaps = 17/453 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL C SM +L +IHA ++I+ + + +LL FCA+S SG L+YA +F+ I +
Sbjct: 27 LSLL-QGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHN 85
Query: 78 PNHFMWNTLIRAQASSLNPDK--AIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCC 134
P WN++IR + S +P + AI Y +M A P+ +TF+F+LKAC + C
Sbjct: 86 PQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKC 145
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+++H + + G D D+ + L+R Y+ + + A +VF+E+ R L W +MIS Y Q+
Sbjct: 146 REVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQT 205
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EAL ++DQM + + TL S+LS+CA G L +G ++H F R +G
Sbjct: 206 GLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVG 265
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ MY K G+LA A ++F+SMP+R++ TWN+MI G HG +EA+ F + +
Sbjct: 266 NALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVR 325
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN ITF+G+L C H G + G Q F M + ++P I+HYGCMVDL GR GK+ EA E
Sbjct: 326 PNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALE 385
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
+I+ + D V+W LL +CK H N+E+ E ++ ++ L G V+LS +YAEA+
Sbjct: 386 VIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKD 445
Query: 435 MKMQLEILLVQVLFAGLASAADILQNPDFESPP 467
++ G+A ++Q+ ++ P
Sbjct: 446 LQ-------------GVARMRKLIQSRGIKTTP 465
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 259/453 (57%), Gaps = 17/453 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL C SM +L +IHA ++I+ + + +LL FCA+S SG L+YA +F+ I +
Sbjct: 9 LSLL-QGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHN 67
Query: 78 PNHFMWNTLIRAQASSLNPDK--AIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCC 134
P WN++IR + S +P + AI Y +M A P+ +TF+F+LKAC + C
Sbjct: 68 PQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKC 127
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+++H + + G D D+ + L+R Y+ + + A +VF+E+ R L W +MIS Y Q+
Sbjct: 128 REVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQT 187
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EAL ++DQM + + TL S+LS+CA G L +G ++H F R +G
Sbjct: 188 GLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVG 247
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ MY K G+LA A ++F+SMP+R++ TWN+MI G HG +EA+ F + +
Sbjct: 248 NALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVR 307
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN ITF+G+L C H G + G Q F M + ++P I+HYGCMVDL GR GK+ EA E
Sbjct: 308 PNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALE 367
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
+I+ + D V+W LL +CK H N+E+ E ++ ++ L G V+LS +YAEA+
Sbjct: 368 VIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKD 427
Query: 435 MKMQLEILLVQVLFAGLASAADILQNPDFESPP 467
++ G+A ++Q+ ++ P
Sbjct: 428 LQ-------------GVARMRKLIQSRGIKTTP 447
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 241/399 (60%), Gaps = 2/399 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ I A + + D F S L+ A S D++ A LF++++ MWN +I A
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYA--SCRDVAAAQLLFDAVEENGVVMWNAIITAYM 196
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ N + + ++ M G A ++ T V+ AC + K + +V + GL + +
Sbjct: 197 KNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRN 256
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
++ L+ Y+ +L AR++FD +++R + W+ MISGY Q+ + EAL LF +M +
Sbjct: 257 LMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAE 316
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EPN VT+ SVLSACA G LE G+ VH +++ + + ILGTALV Y K G + A
Sbjct: 317 VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAV 376
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F+SMP +N TW A+I G+A++G EAL+LF + K I P D+TF+GVL AC H+
Sbjct: 377 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSC 436
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ GR+ F SM + YGI+P+ EHYGC+VDLLGR G + EA + I+ M +P+ V+W AL
Sbjct: 437 LVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRAL 496
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L++C H N+E+ E +K+I++L P++ G Y++LSN+YA
Sbjct: 497 LSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYA 535
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 194/390 (49%), Gaps = 8/390 (2%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN 73
P PP + L + L Q+HA +I S + L A +S L YA LF
Sbjct: 18 PAPPHAPLRTDPR---YLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFR 74
Query: 74 SIQSP--NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRS 130
P + +N L+RA + +P+ A+ L++ M P+QHT LK+CS + +
Sbjct: 75 LGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCT 134
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
L+ + I + K GL D V++ L+ Y+ D+ A+ +FD + + +W +I+
Sbjct: 135 LDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITA 194
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
Y ++ E + +F ML G + +TL SV++AC + G +LG+ V +V +G
Sbjct: 195 YMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRN 254
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
L TAL+ MY K G L KA+ LFD M R++ W+AMISG EAL LF +++
Sbjct: 255 RNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQL 314
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
++ PND+T V VLSAC G ++ G+ + ++R + I +VD +CG +
Sbjct: 315 AEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRR-KRLSLTIILGTALVDFYAKCGCID 373
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+A E + M K + W AL+ +G
Sbjct: 374 DAVEAFESMPVK-NSWTWTALIKGMATNGR 402
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 229/373 (61%), Gaps = 2/373 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+L A R+F+ I + WN++I + A+ L+ MR GF P++ T
Sbjct: 172 SRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLV 231
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L AC ++ L I V ++ +DL+ V + L+ Y DL++AR+VFD + +
Sbjct: 232 SILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKK 291
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W MI+GYAQ+ ++EA++LF M G P+ +TL VLSACA G L+ G+ +
Sbjct: 292 DVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLD 351
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ RG + + TAL+ MY K G+L A +F+ MP++N +WNAMIS LA HG +
Sbjct: 352 TYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQ 411
Query: 300 EALDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E+L LF+++ KE + PNDI+F+GVLSAC HAG +D GRQ+F M +G+ PKIEH+
Sbjct: 412 ESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHS 471
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLL R G V EA + I++M KPD V+ GALL AC+ N++V+ERV+ ++ +EP
Sbjct: 472 CMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPL 531
Query: 418 NHGVYVVLSNMYA 430
N G Y++ S ++A
Sbjct: 532 NSGNYIISSKIFA 544
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 235/422 (55%), Gaps = 14/422 (3%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
Q L LSLL +C S L+QIH QMII++ + +F R + D + A+
Sbjct: 27 QQTLTDKLLSLLK-QCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDL------KDFNNAS 79
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNP-DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
LF+ I PN + +N +IR ++ + I Y M+ G PN T+ FV AC+N+
Sbjct: 80 LLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANL 139
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
LN + H+ V KSGL D HV + L+ YS +L AR+VFDEI + L W +MI
Sbjct: 140 LVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMI 199
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
SGY++ A +A+ LF +M GFEP+ +TL S+L AC G L LG + FV +
Sbjct: 200 SGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMD 259
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+ + +G+AL+ MY K G L+ A+ +FD M ++++ TWNAMI+G A +G ++EA+ LF +
Sbjct: 260 LNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGM 319
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ + P+ IT VGVLSAC G +D G+ + + G++ I ++D+ +CG
Sbjct: 320 RESGVNPDKITLVGVLSACASIGALDFGKWL-DTYASERGLQNDIYVSTALIDMYAKCGS 378
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHG----NIEVAERVVKEIIALEPNNHGVYVV 424
+ +A + + M K +V W A+++A HG ++ + +R+ KE A+ PN+ V
Sbjct: 379 LDDALRVFEDMPQKNEVS-WNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGV 437
Query: 425 LS 426
LS
Sbjct: 438 LS 439
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 237/407 (58%), Gaps = 1/407 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M + KQ HA+++ D F AS L+A CALS G + YA +F + P F +NT++
Sbjct: 1 MEEFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMM 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R +N ++A+ Y M G P+ T+ +LKAC+ + ++ Q+H H+ K GL+
Sbjct: 61 RGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLE 120
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D+ V N L+ Y ++ VF+++ R++ W+ +I+ +A ++ L L M
Sbjct: 121 NDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDM 180
Query: 208 LMEGF-EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
EG+ L SVLSAC G L+LG VH F+ + I+ T+L+ MY K G
Sbjct: 181 SNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGX 240
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L K LF M ++N +++ MISGLA HG+ E L +F ++ ++ + P+DI +VGVL+A
Sbjct: 241 LYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNA 300
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG + G Q F MK +GIEP I+HYGCMVDL+GR GK+ EA ELIK M +P+ V
Sbjct: 301 CSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDV 360
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+W +LL+A K H N++ E K++ L+ YVVLSNMYA+A+
Sbjct: 361 LWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQ 407
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 226/369 (61%), Gaps = 1/369 (0%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
+ YA R+F I++P+ F+WNT+IR + P+KA Y M+ G + T++F++K
Sbjct: 1 MDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKV 60
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C + S KQIH +V K GL+ + V N LV Y + D+ A +F+E+ L W
Sbjct: 61 CGQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAW 120
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
T+I R EA+ LF +ML G +P+ T LSACA G L++G +VH +
Sbjct: 121 NTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDH 180
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G + +L+ MY K G + A +F+ M RNI +WN MI GLA HGH +EAL+L
Sbjct: 181 TGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALEL 240
Query: 305 FRKLEKEQI-VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
F K+ +E++ PN++TF+GVL AC H G ++ GR+ F M+R Y I+P I+HYG MVD+L
Sbjct: 241 FSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDIL 300
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
GR G V EA LIK M + + ++W LLAAC+ HGN+E+AE+V ++++ LEP++ YV
Sbjct: 301 GRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQQLLELEPDHSSDYV 360
Query: 424 VLSNMYAEA 432
+L+NMYA A
Sbjct: 361 LLANMYASA 369
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 9/282 (3%)
Query: 32 KQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
KQIH ++ +++H F + L+ + D+ AT LF + WNT+I
Sbjct: 71 KQIHCN-VLKHGLEEHVFVRNTLVHMYGMFK--DIEAATHLFEEMPKSYLVAWNTIIDCN 127
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+AI L+ M ++G P+ TF L AC+ + L+ +++H+ + +GL +
Sbjct: 128 VYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVV 187
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ Y+ + A ++F++++ R + W TMI G A +EAL LF +ML E
Sbjct: 188 SVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEE 247
Query: 211 GF-EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG--TALVHMYTKNGAL 267
PN VT VL AC+ G +E G + ++ R + + + ++V + + G +
Sbjct: 248 KLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMR-RDYNIQPTIKHYGSMVDILGRAGLV 306
Query: 268 AKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKL 308
+A L SMP E N W +++ HG+ E A + ++L
Sbjct: 307 EEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQQL 348
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 245/436 (56%), Gaps = 34/436 (7%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS-YATRLFNSIQSPNHFMWNTLIR 88
Q+KQ HA++++ D S LLAF A+SSS S YA ++NSI P F N +IR
Sbjct: 46 QIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIR 105
Query: 89 AQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
P +I LY +M R+ A PN+HT TFVL+ACSN ++ Q+ THV K G
Sbjct: 106 CFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFV 165
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRN----------------------------- 178
D+ V N L+ Y + +A+QVFDE+ +
Sbjct: 166 KDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVE 225
Query: 179 ---RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ + W T+ISG Q+ +AL F ++ + PN L S+L+A AQ G LE G
Sbjct: 226 MPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYG 285
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+++H F M A LGTALV MY K G + +++ LFD MPE++ +WN MI GLA+H
Sbjct: 286 KRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATH 345
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G +EAL LF K + P ++TF+GVL+AC AG + G+ F M YGIEP++EH
Sbjct: 346 GLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEH 405
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
YGCMVDLL R G V +A E+I RM PD V+W ++L +C+ HG IE+ E + ++I ++
Sbjct: 406 YGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMD 465
Query: 416 PNNHGVYVVLSNMYAE 431
P ++G YV L+ ++A
Sbjct: 466 PTHNGHYVQLARIFAR 481
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 242/414 (58%), Gaps = 1/414 (0%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
L +C ++ L Q+HA +I Q+ F +L+ FCA+S GD++YA +F+ I++ +
Sbjct: 60 FLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENAD 119
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F+WNT+IR + A Y M G A + TF+F+LK + S+ KQ+H
Sbjct: 120 GFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHV 179
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
++ K GLD ++V N L+ Y D+N AR +FDE+ L W +I + NE
Sbjct: 180 NILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNE 239
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL LF QML G EP+ TL +SAC+ G L+ G VH V + +L+
Sbjct: 240 ALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNSNDRGKTIAVFNSLID 299
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI-VPNDI 318
MY K GA+ A+ +F+++ +NI TWN MI GLA+HG AE+AL LF + E++ P+ +
Sbjct: 300 MYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGV 359
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TF+ VL AC + G ++ GR+ F M + + I+P ++HYG MVD+LGR G V EA +LIK
Sbjct: 360 TFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKS 419
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
M + + V+W LLAAC+ HGN+E+ ERV ++ + ++ YV+L+NMYA +
Sbjct: 420 MPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASS 473
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 155/306 (50%), Gaps = 7/306 (2%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS--DLN 167
G+ + F F+ K CS ++ LN Q+H + + G D +L V+ L+ +VS D+N
Sbjct: 50 GYFAKEQKFMFLFKQCSTLKDLN---QLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMN 106
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
A VFD I N +W TMI G+ ++ + A + +ML +G ++ T + +L
Sbjct: 107 YAVVVFDRIENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTG 166
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
Q G + LG+++HV + G + + L+HMY + + A+ LFD +P+ ++ WNA
Sbjct: 167 QLGSIMLGKQLHVNILKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNA 226
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
+I S G EALDLF ++ + + P++ T V +SAC G +D GR + +
Sbjct: 227 VIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHVNS-N 285
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
I + ++D+ +CG V A E+ + K ++V W ++ HG+ E A +
Sbjct: 286 DRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGK-NIVTWNTMIMGLATHGDAEDALTL 344
Query: 408 VKEIIA 413
++A
Sbjct: 345 FSNMLA 350
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 254/438 (57%), Gaps = 39/438 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+QLKQIHA + + F +LL DL YA LF+ I P+ +++N I
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQL------PDLPYACTLFDQIPKPSVYLYNKFI 54
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ +S +P + LY M G +PNQ++FTF+ AC+++ ++ + +H+H KSG
Sbjct: 55 QTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFA 114
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D+ + L+ Y+ L +ARQ+FDE+ R + W ++I+GYA+S AL LF++M
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKM 174
Query: 208 ----------LMEGF----------------------EPNSVTLASVLSACAQSGCLELG 235
L+ G+ +PN V++ASVL AC+Q G L++G
Sbjct: 175 PVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIG 234
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM-PERNIATWNAMISGLAS 294
+++ + + GF A + A++ ++ + G + +A+ +FD + +RN+ +WN MI GLA
Sbjct: 235 KRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAV 294
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG +AL L+ ++ ++ P+D+TFVG+L AC H G + GRQ+F SM+ + + PK+E
Sbjct: 295 HGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLE 354
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGC+VDLLGR G++ EA LI+ M PD V+WG LL AC HGN+E+ E + + L
Sbjct: 355 HYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKL 414
Query: 415 EPNNHGVYVVLSNMYAEA 432
EP N G YV+LSN+YA A
Sbjct: 415 EPWNPGNYVILSNIYALA 432
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 249/420 (59%), Gaps = 6/420 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L + K ++Q+ IHAQ+I + QD F LL C S + YA+R+F +PN
Sbjct: 38 LLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSC--SKCHAIDYASRIFQYTHNPNV 95
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+++ LI SS N AI LY M P+ + +LKAC + +L +++H+
Sbjct: 96 YLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSR 155
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN----VWTTMISGYAQSFR 196
K GL + V ++ Y +L +AR+VF+E+ + WT MI G+ ++
Sbjct: 156 ALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEE 215
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
N AL F M E PN T+ VLSAC+Q G LE+G VH +++ E+ +G A
Sbjct: 216 MNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNA 275
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L++MY++ G++ +A+ +FD M +R++ T+N MISGL+ +G + +A++LFR + ++ P
Sbjct: 276 LINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPT 335
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
++TFVGVL+AC H G +D G +IF SM R YG+EP+IEHYGCMVDLLGR G++ EA +LI
Sbjct: 336 NVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLI 395
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ M PD +M G LL+ACK H N+E+ E+V K + + G YV+LS++YA + K
Sbjct: 396 RTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWK 455
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 252/441 (57%), Gaps = 36/441 (8%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + QLK+IHA ++ S Q +F +++L C + G +SYAT LF + PN F +N
Sbjct: 20 CFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSC--DNLGHVSYATLLFKQLLHPNIFTYN 77
Query: 85 TLIRAQASSLNPDKAIFLYMNM---RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
+IR A + + AI +++ M P++ TF FV+K+C+ + Q+H V
Sbjct: 78 AIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLV 137
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDL-------------------------------NNAR 170
K G D N L+ Y+ DL N+AR
Sbjct: 138 YKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSAR 197
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
++FD++ RT+ WTTMI+GY + +AL +F +M M G EP+ +++ +VL ACAQ G
Sbjct: 198 ELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLG 257
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LE+G+ +H++ GF + AL+ MY K G + +A LFD + E+++ +W+ MI
Sbjct: 258 ALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIG 317
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
GLA+HG EA+ LF ++ K ++ PN+ITF+GVL AC H G D G + F M Y IE
Sbjct: 318 GLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIE 377
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P+IEHYGC++DLLGR G + +A + I +M KPD +W +LL++C+ H N+++A VK+
Sbjct: 378 PEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQ 437
Query: 411 IIALEPNNHGVYVVLSNMYAE 431
++ LEP G YV+L+NMYAE
Sbjct: 438 LMELEPEESGNYVLLANMYAE 458
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 147/332 (44%), Gaps = 41/332 (12%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
LK C + L K+IH HV K L +V ++ ++ A +F ++ + +
Sbjct: 17 LKNCFKITQL---KKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNI 73
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFE---PNSVTLASVLSACAQSGCLELGEKV 238
+ +I YA + + A+ +F QML P+ T V+ +C C LG +V
Sbjct: 74 FTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQV 133
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAK----------------------------- 269
H V G + I AL+ MYTK G L
Sbjct: 134 HGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQM 193
Query: 270 --AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ LFD MP R I +W MI+G G +ALD+FR+++ I P++I+ + VL AC
Sbjct: 194 NSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPAC 253
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
G ++VG+ I + G K ++++ +CG + EA L ++V K DV+
Sbjct: 254 AQLGALEVGKWIHMYADK-NGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEK-DVIS 311
Query: 388 WGALLAACKNHGNIEVAERVVKEI--IALEPN 417
W ++ NHG A ++ +E+ + + PN
Sbjct: 312 WSTMIGGLANHGKGYEAIQLFEEMCKVRVAPN 343
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 248/407 (60%), Gaps = 3/407 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
K++ KQ+HA++ + A++L+ F ++ +S L A LF+ I N F+WN
Sbjct: 72 KALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNS--LRNAHHLFDKIPKGNLFLWNV 129
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
LIRA A + + AI LY M G P+ T FVLKACS + ++ + IH V +SG
Sbjct: 130 LIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSG 189
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ D+ V LV Y+ + +AR VFD+I +R +W +M++ YAQ+ +E+L L
Sbjct: 190 WERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCC 249
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M +G P TL +V+S+ A CL G ++H F GF+ + TAL+ MY K G
Sbjct: 250 EMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCG 309
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
++ A LF+ + E+ + +WNA+I+G A HG A EALDLF ++ KE P+ ITFVG L+
Sbjct: 310 SVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALA 368
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC +D GR ++ M R I P +EHY CMVDLLG CG++ EA +LI++M PD
Sbjct: 369 ACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDS 428
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL +CK HGN+E+AE ++++I LEP++ G YV+L+NMYA++
Sbjct: 429 GVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQS 475
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 160/301 (53%), Gaps = 6/301 (1%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
N + + +L++C + ++L KQ+H + + G+ +L + LV YSV + L NA +F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
D+I L +W +I YA + A+ L+ QML G +P++ TL VL AC+ +
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G +H V G+E +G ALV MY K G + A+ +FD + +R+ WN+M++ A
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYA 236
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+GH +E+L L ++ + + P + T V V+S+ + GR+I G R +G +
Sbjct: 237 QNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWR-HGFQYND 295
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG----NIEVAERVVK 409
+ ++D+ +CG V A L +R+ K VV W A++ HG +++ ER++K
Sbjct: 296 KVKTALIDMYAKCGSVKVACVLFERLREK-RVVSWNAIITGYAMHGLAVEALDLFERMMK 354
Query: 410 E 410
E
Sbjct: 355 E 355
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 237/398 (59%), Gaps = 6/398 (1%)
Query: 41 SSRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNP 96
+ ++ D + ++++ AL +S G + A +F+ I + WN +I + N
Sbjct: 117 AHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNY 176
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ L+ M +T P++ T V+ A + S+ +Q+H+ ++ G +L +VN L
Sbjct: 177 KEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNAL 236
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ YS ++ A +F + + + W +I GY EAL+LF +ML G PN
Sbjct: 237 IDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPND 296
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
VT+ S+L ACA G +++G +HV++ +++G + L T+L+ MY+K G + A +F
Sbjct: 297 VTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVF 356
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
+SM +++ WNAMI G A HG A A D+F ++ K +I P+DITFVG+LSAC HAG +D
Sbjct: 357 NSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLD 416
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+GR IF SM Y I PK+EHYGCM+DLLG G EAEE+I M +PD V+W +LL A
Sbjct: 417 LGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKA 476
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
CK HGN+E+ E+ + + +EPNN G YV+LSN+YA A
Sbjct: 477 CKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATA 514
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 237/508 (46%), Gaps = 79/508 (15%)
Query: 54 LAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
L FC LS + L YA +F +IQ PN +WNT+ R A S +P A+ LY+ M G
Sbjct: 1 LEFCILSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLL 60
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA--- 169
PN +TF F+LK+C+ +++ QIH HV K G +LDL+V L+ Y + L +A
Sbjct: 61 PNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKV 120
Query: 170 ----------------------------RQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
R +FDEI + + W MISGY ++ EAL
Sbjct: 121 FDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEAL 180
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
LF +M+ P+ T+ +V+SA A+SG +ELG +VH ++ GF + AL+ Y
Sbjct: 181 ELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFY 240
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+K G + A LF + +++ +WN +I G +EAL LF+++ + PND+T +
Sbjct: 241 SKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTML 300
Query: 322 GVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+L AC H G ID+GR I + KR+ G+ ++D+ +CG + A ++ M+
Sbjct: 301 SILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSML 360
Query: 381 ------W----------------------------KPDVVMWGALLAACKNHGNIEVAER 406
W KPD + + LL+AC + G +++
Sbjct: 361 HKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRH 420
Query: 407 VVKEI-----IALEPNNHGVYVVL---SNMYAEAESMKMQLEILLVQVLFAGLASAADIL 458
+ + + I + ++G + L S ++ EAE M + + V++ L A +
Sbjct: 421 IFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMH 480
Query: 459 QNPD----FESPPTNLTPNRSTPFVLLN 482
N + F + PN +VLL+
Sbjct: 481 GNVELGEKFAQNLFKIEPNNPGSYVLLS 508
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 241/407 (59%), Gaps = 4/407 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M + KQ+HAQ++ + ++ F AS L+A CALS G + YA +F I P F +NT+I
Sbjct: 1 MEEFKQVHAQVL---KWENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMI 57
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R + +N + A+FLY M G + T+ + KAC+++RS+ QIH ++ K GL+
Sbjct: 58 RGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLE 117
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
DL V N L+ Y + + VF+ + R + W+ +I+ +A +E L +F +M
Sbjct: 118 GDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEM 177
Query: 208 LMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
EG P L SVLSAC G L+LG HV + EM I+ T+L+ MY K G
Sbjct: 178 SREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGC 237
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ K +LF M ++N +++ MI+GLA HG EAL +F + +E + P+D+ ++GVLSA
Sbjct: 238 IEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSA 297
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG +D G Q F MK +GIEP I+HYGC+V L+GR G + +A E I+ M KP+ V
Sbjct: 298 CNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEV 357
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+W LL+ACK H N+E+ E K + L +N G YVVLSNMYA A+
Sbjct: 358 VWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAK 404
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 250/450 (55%), Gaps = 35/450 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L+LL +C +M L+Q+HA ++ S +D AASR +AFCA D +YA R+
Sbjct: 33 PALTLLHTQCATMAHLRQLHAALVKSGLSKDPIAASRAVAFCA-GEGRDAAYAARIVRYH 91
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
PN FMWNT IRA + PD A+ L+++M R+ P + TF + A + + +
Sbjct: 92 PRPNSFMWNTAIRALSDGPGPDAAVALFVDMLRSPTPPERRTFPSLFAAYARLGRADDGA 151
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVS-------------------------------S 164
+H V K GL D + N + Y+ S
Sbjct: 152 ALHGMVLKLGLAGDAYTRNTTIAMYASSGRADEALALFGQCQVFDVVACNSAIVALSRAG 211
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ AR VFD + +RT+ W+ M+S Y+++ R ++A+ LF M ++G EPN+ L SVL
Sbjct: 212 RVDEARAVFDGMPSRTVATWSAMVSAYSRAARFHDAVDLFSAMQVDGVEPNANVLVSVLG 271
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA- 283
CA G LE G VH ++ + M A++ ALV MY K G++ KA+ +FD+ + +A
Sbjct: 272 CCASLGALEQGAWVHAYIDKQDVGMNALVVIALVDMYCKCGSIHKARQVFDTSRSQGLAK 331
Query: 284 --TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+WNAM+ GLA+HG +EAL LF +LE + P+++TF+ +L A H+G D + +F
Sbjct: 332 LSSWNAMMLGLAAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYGHSGMADEAKALFA 391
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM R YG+ P IEHYGC+VD L R G++ EAE+ I+ M KPD +WGALL+ C+ HG+
Sbjct: 392 SMAREYGVTPGIEHYGCLVDALARAGRLREAEDTIRAMPMKPDAAIWGALLSGCRLHGDA 451
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
E R + + +P + G YV+ +++ A
Sbjct: 452 EAGARAARGAVECDPRDSGAYVLAASVLAR 481
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 285/525 (54%), Gaps = 49/525 (9%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+ KS ++ K+IHA +I+ Q F ++++ C GD+ YATRLFN + +PN F++
Sbjct: 19 RVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLC--DKLGDMDYATRLFNQVSNPNVFLY 76
Query: 84 NTLIRAQA-SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N++IRA +SL D +R+T P++ TF F+ K+C+++ S KQ+H H+
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLY 136
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR----------------------- 179
K G + N L+ Y DL +A +VFDE+ R
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQMKKAKG 196
Query: 180 --------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
T+ WT MISGY EA+ F +M + G EP+ ++L SVL +CA G
Sbjct: 197 LFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGS 256
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LELG+ +H++ + RG + AL+ MY+K G L++A LF+ +++ +W+ MISG
Sbjct: 257 LELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISG 316
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HG+A A + F ++++ ++ PN ITF+G+LSAC H G G + F M++ Y IEP
Sbjct: 317 YAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQDYQIEP 376
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
KIEHYGC++D+L R GK+ A E+ K M KPD +WG+LL++C+ GN++VA + +
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVALVAMDHL 436
Query: 412 IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL 470
+ +EP++ G YV+L+N+YA+ + ++ I++ + ++P +L
Sbjct: 437 VEVEPDDMGNYVLLANIYADLGK-------------WEDVSRLRKIIRKENMKKTPGCSL 483
Query: 471 TPNRSTPFVLLNGNNTIPGWT-FEGTVQYVTASQTIRLPDNGHAI 514
+ + G+N+ P WT +Q T+ Q + N +A+
Sbjct: 484 IEVNNIVQEFVAGDNSKPFWTEISLVLQLFTSHQDQDVIKNNNAL 528
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 264/463 (57%), Gaps = 42/463 (9%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + +LKQIHA+M+ S +QD +A ++ L+FC SS ++ FN P+ F+W
Sbjct: 20 KCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDV-FFNGFDRPDTFLW 78
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N +IR + S PD+++ LY M N +TF F+LKACSN+ + QIH H++K
Sbjct: 79 NLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITK 138
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI--------------------------- 176
G D++ VN L+ Y+V+ + +A +FD I
Sbjct: 139 FGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTL 198
Query: 177 ------RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
+N ++ WTTMISGY Q+ EAL LF +M P++V+LAS LSAC+Q G
Sbjct: 199 FRKMPEKNNAIS-WTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLG 257
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LE G+ +H + + ++L L+ MY K G + +A +F +M +++ W A+IS
Sbjct: 258 ALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALIS 317
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
G A HG EA+ F +++ + PN ITF VL+AC + G ++ G+ +F +++R Y ++
Sbjct: 318 GYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLK 377
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P IEHYGCMVDLLGR G + EA I++M KP+ V+WG+LL AC+ H NIE+ E++ +
Sbjct: 378 PTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEI 437
Query: 411 IIALEPNNHGVYVVLSNMYA-------EAESMKMQLEILLVQV 446
+I ++ N+ G YV ++N++A AE+ ++ E +V+V
Sbjct: 438 LIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKV 480
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 256/454 (56%), Gaps = 41/454 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASR------LLAFCAL----SSSGDLSYATR 70
L +CK+++QL Q+HAQ + +S L A + SS L YA
Sbjct: 33 LIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSLLHYAVS 92
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
F++IQ+P+ F +N +IR + A+ ++ MRR P+ H++ F LKAC+++R
Sbjct: 93 TFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKACAHLRV 152
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR---TLNV---- 183
L+ + +H+ V K G DL+V+N L+ YS+ LN A QVFDE +R + N
Sbjct: 153 LSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNALVDG 212
Query: 184 ------------------------WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
W ++I+GYAQ NEA+ LFD M+ EP+++ L
Sbjct: 213 FVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEPDNIAL 272
Query: 220 ASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE 279
S LSACAQ G LE G+++H ++K + + L T LV Y K+G + A +F+ P+
Sbjct: 273 VSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTAIKVFELSPD 332
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
+++ TWNAM+ G+A HG++ L+ F ++ + I P+ I+F+GVL C H G +D +++
Sbjct: 333 KSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGGLVDEAKKL 392
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
F M+ +YG+ +++HYGCM DLL R G + EA EL K + D+ +W LL C+ HG
Sbjct: 393 FDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIFVWSGLLGGCRIHG 452
Query: 400 NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
NIE+AE+ K+++ L+P + GVY +L+N+YA A+
Sbjct: 453 NIEIAEQAAKQVMELKPEDGGVYSILANVYANAD 486
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/410 (40%), Positives = 237/410 (57%), Gaps = 5/410 (1%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
+K++H + + D S AF + G + A +F+ + N WN +I
Sbjct: 354 VKEVHKHAVEVGLVSDLRVGS---AFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGG 410
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
A +A+ L++ MRR GF P+ TF +L A +L K++H++ +GL +D
Sbjct: 411 VAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VD 469
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
L V N LV Y+ + A+QVFD++ R + WT MISG AQ +EA LF QML
Sbjct: 470 LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLR 529
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EG P++ T S+LSACA +G LE ++VH G +G ALVHMY K G++
Sbjct: 530 EGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDD 589
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A+ +FD M ER++ +W MI GLA HG +ALDLF K++ E PN +FV VLSAC H
Sbjct: 590 ARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSH 649
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
AG +D GR+ F S+ + YGIEP +EHY CMVDLLGR G++ EA+ I M +P WG
Sbjct: 650 AGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWG 709
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQL 439
ALL AC +GN+E+AE KE + L+P + YV+LSN+YA + + +L
Sbjct: 710 ALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKL 759
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 197/387 (50%), Gaps = 8/387 (2%)
Query: 12 PLPIPPLSLLADKCK--SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P I LS+L C S+ K+IHA +I S D + L+ G + A
Sbjct: 28 PNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYV--KCGSIDDAQ 85
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+F+ + N W +I A +A ++ M+R GF PN +T+ +L A ++
Sbjct: 86 LIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAG 145
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+L K++H+H +GL LDL V N LV Y+ S +++AR VFD + R + WT MI
Sbjct: 146 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIG 205
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA--QSGCLELGEKVHVFVKMRGF 247
G AQ R EA LF QM G PN T S+L+A A +G LE ++VH GF
Sbjct: 206 GLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGF 265
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+G AL+HMY K G++ A+ +FD M +R++ +WNAMI GLA +G EA +F K
Sbjct: 266 ISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLK 325
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+++E VP+ T++ +L+ G + +++ V G+ + V + RCG
Sbjct: 326 MQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV-GLVSDLRVGSAFVHMYIRCG 384
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAA 394
+ +A+ + ++ + +V W A++
Sbjct: 385 SIDDAQLIFDKLAVR-NVTTWNAMIGG 410
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 167/316 (52%), Gaps = 4/316 (1%)
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I A + A+ +Y MRR G PN+ T+ +LKAC + SL K+IH H+ +SG
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D+ V LV Y +++A+ +FD++ R + WT MI G A R EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM EGF PNS T S+L+A A +G LE ++VH G + +G ALVHMY K+G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL- 324
++ A+ +FD M ER+I +W MI GLA HG +EA LF ++E+ +PN T++ +L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 325 -SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
SA G ++ +++ + G + ++ + +CG + +A + M
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKA-GFISDLRVGNALIHMYAKCGSIDDARLVFDGMC-DR 298
Query: 384 DVVMWGALLAACKNHG 399
DV+ W A++ +G
Sbjct: 299 DVISWNAMIGGLAQNG 314
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 190/380 (50%), Gaps = 17/380 (4%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ +K++H+ + + D + L+ A SG + A +F+ + + F W +
Sbjct: 146 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYA--KSGSIDDARVVFDGMVERDIFSWTVM 203
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC--SNVRSLNCCKQIHTHVSKS 144
I A +A L++ M R G PN T+ +L A ++ +L K++H H K+
Sbjct: 204 IGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKA 263
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G DL V N L+ Y+ +++AR VFD + +R + W MI G AQ+ +EA +F
Sbjct: 264 GFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIF 323
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M EGF P+S T S+L+ +G E ++VH G +G+A VHMY +
Sbjct: 324 LKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRC 383
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ A+ +FD + RN+ TWNAMI G+A EAL LF ++ +E P+ TFV +L
Sbjct: 384 GSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNIL 443
Query: 325 SACCHAGFIDVGRQIFGSMKRV--YGIEPKIEHY---GCMVDLLGRCGKVLEAEELIKRM 379
SA +VG + +K V Y I+ + +V + +CG + A+++ M
Sbjct: 444 SA-------NVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDM 496
Query: 380 VWKPDVVMWGALLAACKNHG 399
V + +V W +++ HG
Sbjct: 497 V-ERNVTTWTVMISGLAQHG 515
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/475 (37%), Positives = 259/475 (54%), Gaps = 44/475 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L K+ L QIHA + + S ++ C +S + YAT +FN PN
Sbjct: 15 LLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVC--TSLHQIPYATTIFNHTHHPNI 72
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRT--GFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
++N++I+A SS P F + N+ + P+ TF +LKA S +R + + +H
Sbjct: 73 LLFNSIIKAH-SSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLH 131
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY------- 191
HV+ G V L+ YS + +A +VFDE+ +R + VW MI+G+
Sbjct: 132 AHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLE 191
Query: 192 ------------------------AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
AQ + EA +F +ML +GFEP+ TL +VL CA
Sbjct: 192 IGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCA 251
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAI-LGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+ G ++ GE +H + +G I +G +LV Y K G L A +F+ M ++N+ +WN
Sbjct: 252 RLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWN 311
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
AMISGL +G E ++LF K+ ++ + P+D TFVGVL+ C HAGF+D GR+IF SM
Sbjct: 312 AMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVK 371
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
+ + PK+EHYGC+VDLLGRCG V EA +LI+ M P+ +WGALL+AC+ HG+ EVAE
Sbjct: 372 FKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEI 431
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNP 461
KE++ LEP N G YV+LSN+YAE E+ V+VL G+ I +NP
Sbjct: 432 AAKELVRLEPGNSGNYVLLSNVYAEERKWN---EVEKVRVLMQGVG----IKKNP 479
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 246/448 (54%), Gaps = 39/448 (8%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRL-LAFCALSSSGDLSYATRLFN 73
+ + L DK KS+ L QIHA ++ + +L ++ AL G L + +FN
Sbjct: 47 VERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAAL---GRLDCSVFVFN 103
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+ PN F ++ +I + S D+A Y M G PN TF+ VLK+CS L
Sbjct: 104 TFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LES 159
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLV-------------------------------RCYSV 162
K +H K GL DL+V LV CYS
Sbjct: 160 GKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSK 219
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+L+ AR +F+ ++ R + W MI GYAQS NE+L LF +ML+ PN VT+ +V
Sbjct: 220 MGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAV 279
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSAC Q G LE G +H +++ +G ++ +GTAL+ MY+K G+L A+ +FD + ++++
Sbjct: 280 LSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDV 339
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
WN+MI G A HG ++ AL LF ++ + P DITF+G+LSAC H G ++ GR F
Sbjct: 340 VAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRL 399
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+ YGIEPKIEHYGCMV+LLGR G + EA L+K M D V+WG LL C+ H NI+
Sbjct: 400 MRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIK 459
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ E + K ++ + N G YV+LSNMYA
Sbjct: 460 LGEEIAKFLVDQKLANSGTYVLLSNMYA 487
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 252/442 (57%), Gaps = 40/442 (9%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ LK +HA ++ +D + +++L F + G+ +Y+ R+F+ + PN F++NT+
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSF--NFGNTNYSHRIFHQTKEPNIFLFNTM 79
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I + + ++I +Y +MR+ G +P+ TF F+LKAC+ + ++H V K+G
Sbjct: 80 IHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGC 139
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA-------------- 192
+ D V LV Y ++NA +VFD+I + + WT +ISGY
Sbjct: 140 ESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRR 199
Query: 193 --------------------QSFRAN----EALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
Q + +N EAL LF +ML EGF P+ + VL ACA+
Sbjct: 200 ACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACAR 259
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G LELG + F +LGTAL+ MY K G + A +F M +++I WNA
Sbjct: 260 LGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAA 319
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
ISGLA GH + A LF ++EK I P+ TFVG+L AC HAG +D GRQ F SM+RV+
Sbjct: 320 ISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFT 379
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
+ P+IEHYGCMVDLLGR G + EA +L+K M + + ++WGALL C+ H + ++ E V+
Sbjct: 380 LTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVL 439
Query: 409 KEIIALEPNNHGVYVVLSNMYA 430
K++IALEP+N G YV+LSN+Y+
Sbjct: 440 KQLIALEPSNSGNYVLLSNIYS 461
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 263/472 (55%), Gaps = 67/472 (14%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M LK +HAQ+I+ + +L++FCA+ +GDL YA R+F+ I PN FM+N+LI
Sbjct: 1 MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS------------------NVR 129
R ++S +P A+ L+ M +G +PN+ T FVLKAC +
Sbjct: 61 RGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIG 120
Query: 130 SL-----------------NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
SL +C +++ ++ L +D+ V N LV Y+ +L++A+ +
Sbjct: 121 SLVFVQNALIAVYVVCGLIHCARKLFDDITDKTL-IDIIVRNALVDMYAKCGNLHSAQAI 179
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM---------------LMEG------ 211
FD + + + WT+MIS YAQ A +FDQM L EG
Sbjct: 180 FDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREAL 239
Query: 212 ----------FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
P+ TL S+L+AC+Q G L +G+K+H ++ G L +L+ MY
Sbjct: 240 DLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMY 299
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + A +F MP +N+ +WN +I LA HG EA+ LF +++ + +P++IT
Sbjct: 300 AKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLT 359
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
G+LSAC H+G +D+G F M +Y + +IEHY CMVDLLGR G + EA ELI RM
Sbjct: 360 GLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPM 419
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
KPDVV+WGALL AC+ HGN+E+ ++++K+++ LEP++ G+YV++SN+Y EA+
Sbjct: 420 KPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQ 471
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 250/420 (59%), Gaps = 6/420 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L + + ++Q+ IHAQ+I + QD F LL C+ + D YA+R+F +PN
Sbjct: 45 LLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAID--YASRIFQYTHNPNV 102
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+++ LI SS N +AI LY M P+ + +LKAC + +L +++H+
Sbjct: 103 YLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSR 162
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN----VWTTMISGYAQSFR 196
K G + V ++ Y +L +AR+VF+E+ + WT MI G+ ++
Sbjct: 163 ALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEE 222
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
N AL F M E PN T+ VLSAC+Q G LE+G VH +++ E+ +G A
Sbjct: 223 TNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNA 282
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L++MY++ G++ +A+ +FD M +R++ T+N MISGL+ +G + +A++LFR + ++ P
Sbjct: 283 LINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPT 342
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
++TFVGVL+AC H G +D G +IF SM R Y +EP+IEHYGCMVDLLGR G++ EA +LI
Sbjct: 343 NVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLI 402
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ M PD +M G LL+ACK H N+E+ E+V KE+ + G YV+LS++YA + K
Sbjct: 403 RTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWK 462
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 247/411 (60%), Gaps = 11/411 (2%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M Q Q+HAQ I S Q+ S+L F A S SGDL+YA L N+ S N + +NT+I
Sbjct: 1 MSQALQLHAQFIKS---QNQRNFSKLFTFAAQSPSGDLNYARLLLNTNPSLNSYYYNTII 57
Query: 88 RAQASSLNPDK-----AIFLYMNMRRTGF-APNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
RA + + NP ++F++M T P+ T++F LK+C ++ KQ+H +
Sbjct: 58 RAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQLHGFI 117
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+K G DL++ N L+ YS +L ARQVFD + +R + WT+MI+G+ EA+
Sbjct: 118 NKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAI 177
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
LF +ML G + N T+ SVL CA SG L +G KVH VK +G + A + TAL+HMY
Sbjct: 178 QLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMY 237
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+K G L A+ +FD + +R++ W AMI GLA HG +EA++LF ++E + P++ T +
Sbjct: 238 SKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIM 297
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
VLSA +AG + G F +++ Y ++P I+H+GCMVDLL + G + EAE+ I M
Sbjct: 298 VVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPM 357
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPNNHGVYVVLSNMYA 430
KPD V+W L+ ACK H + E AER++K E+ + ++ G Y++ SN+YA
Sbjct: 358 KPDAVIWRTLIWACKVHADTERAERLMKHLELQGMSAHDSGSYILASNVYA 408
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 253/418 (60%), Gaps = 5/418 (1%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
+ L +CK +K IHAQ+II ++ F ++L+ A ++ A ++F+ +
Sbjct: 11 TYLLQRCKGTKTIKSIHAQIIIGGFEENPFLGAKLVGKYAQCYESNIEDARKVFDCLPDR 70
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ F+WNT+I+ A+ +A+ +Y MR +G A N++TF FVLKAC ++ + IH
Sbjct: 71 DVFVWNTIIQGYANLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMKDGKKGQAIH 130
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
HV K GLDLDL V N LV Y+ +++ +R+VFD I + + W +MISGYA + A+
Sbjct: 131 GHVVKHGLDLDLFVGNALVAFYAKCNEIGASRRVFDMISEKDIVTWNSMISGYAINGCAD 190
Query: 199 EALMLFDQML-MEG---FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+AL+LF ML ++G + P+S TL ++L ACAQ+ ++ G +H +V G E+ A LG
Sbjct: 191 DALVLFHNMLQVQGDTVYAPDSATLVAILPACAQAAAIQEGLWIHSYVIKSGIELDAALG 250
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+ L+ MY G L A+ +FD + ++NI WNA+I HGHA+EAL +F L +
Sbjct: 251 SGLIAMYANCGLLNSARDVFDRIDDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLH 310
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+ + F+ +LSA HAG + G ++F M YG+E EHY +VD+LGR G + EA E
Sbjct: 311 PDGVIFLCLLSAFSHAGMVAEGMELFEKMGD-YGVEKSSEHYASVVDILGRAGFLHEAVE 369
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+K M +P ++GALL AC+ H NIE+AE + +++ L+P+N G Y++L MY +A
Sbjct: 370 FVKNMPVQPGKDVYGALLGACRIHNNIELAEEIAEKLFVLDPDNAGRYIILVKMYEDA 427
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 251/413 (60%), Gaps = 2/413 (0%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNSIQSP 78
LL KC S+ +L QI A I S I+D ++L+ FC S + +SYA LF ++ P
Sbjct: 34 LLISKCNSLRELMQIQA-YAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ ++N++ R + NP + L++ + G P+ +TF +LKAC+ ++L +Q+H
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
K GLD +++V L+ Y+ D+++AR VFD I + + MI+GYA+ R N
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LF +M + +PN +TL SVLS+CA G L+LG+ +H + K F + TAL+
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 272
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
M+ K G+L A ++F+ M ++ W+AMI A+HG AE+++ +F ++ E + P++I
Sbjct: 273 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TF+G+L+AC H G ++ GR+ F M +GI P I+HYG MVDLL R G + +A E I +
Sbjct: 333 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 392
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+ P ++W LLAAC +H N+++AE+V + I L+ ++ G YV+LSN+YA
Sbjct: 393 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYAR 445
>gi|15240355|ref|NP_200988.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171532|sp|Q9FLS9.1|PP441_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61800
gi|10176873|dbj|BAB10080.1| unnamed protein product [Arabidopsis thaliana]
gi|332010136|gb|AED97519.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 499
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 172/466 (36%), Positives = 255/466 (54%), Gaps = 54/466 (11%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFA-----ASRLLAFCALSSSGD-----LSYA 68
S L C+++ L Q HAQ I S RI + F A+ L A ++S S +SYA
Sbjct: 8 SYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYA 67
Query: 69 TRLFNSIQSPNHFMWNTLIRA----QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
T +F I +P+ F +NT+IR + SSL+ + ++ MRR P+ HTF FV KA
Sbjct: 68 TSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKR---FFVEMRRRSVPPDFHTFPFVFKA 124
Query: 125 CSNVRS--LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR--- 179
C+ ++ L K +H + GL DL +N L+R YS+ + +++A Q+FDE R
Sbjct: 125 CAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVV 184
Query: 180 TLNV----------------------------WTTMISGYAQSFRANEALMLFDQMLMEG 211
T NV W ++ISGYAQ EA+ LFD+M+ G
Sbjct: 185 TYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALG 244
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P++V + S LSACAQSG + G+ +H + K + + + L T LV Y K G + A
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAM 304
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ ++ + TWNAMI+GLA HG+ E +D FRK+ I P+ +TF+ VL C H+G
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW----KPDVVM 387
+D R +F M+ +Y + +++HYGCM DLLGR G + EA E+I++M + ++
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
W LL C+ HGNIE+AE+ + AL P + GVY V+ MYA AE
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAE 470
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 249/485 (51%), Gaps = 71/485 (14%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P+ L + C SM QLKQI A M ++ I F SR+LAFCALS SGD+++A LF+ +Q
Sbjct: 52 PILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINHAHLLFSQLQ 111
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+PN ++WNT+IR + + + M + G + +F F LKAC + K
Sbjct: 112 NPNTYIWNTMIRGYSKAKMGQTGFLFFCQMVQKGVEMDCRSFVFALKACEQFLGVLEGKS 171
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H V K G L V N LV Y + L AR VFDEI R + WT+MI GY++
Sbjct: 172 VHCVVWKMGFVYTLLVQNGLVHFYGLRGCLGLARLVFDEISERDVVSWTSMIDGYSKHKW 231
Query: 197 ANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
+EAL LFD MLM G EPN VT+ +VLS+C+Q G L LG+ +VK R L
Sbjct: 232 CDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEYVKTRNVTRSLNLMN 291
Query: 256 ALVHMYTKNGALAKAKALFDSM-----PERN----------------IATW--------- 285
A++ MY K G L A+ +FD+M P N + W
Sbjct: 292 AILDMYVKCGCLDSAREIFDTMGAAFAPMENTLACVLPVCGQLGCLDVGQWIHRNYVRMR 351
Query: 286 ---------NAMISGLASHGHAEEALDLFRKLEKEQIV---------------------- 314
NA+I A G EA +F + + +V
Sbjct: 352 YNEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMITAYASHGHAKQALSVF 411
Query: 315 ---------PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
P+DIT VGVLSAC H G + G++ F +MKR YGIEPK EHY CM+DLLGR
Sbjct: 412 ERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIEPKNEHYACMIDLLGR 471
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G + +A ELI +M +P WGAL+ AC+ HGN+EVA+ ++ L+P + G+YV+L
Sbjct: 472 VGLLEDAYELITKMPMEPSAAAWGALVHACRMHGNVEVAKIAAPRLLELDPEDSGIYVLL 531
Query: 426 SNMYA 430
+N+ A
Sbjct: 532 ANICA 536
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 259/456 (56%), Gaps = 35/456 (7%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
+A+ C +M LK IHA ++ +++ F A+S +G L YA RLF+ I PN
Sbjct: 1 MAEACLTMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNT 60
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS----LNCCKQ 136
F +NTLIR + S +P +++ L+ MRR P+ TFTF+LK S +R + +
Sbjct: 61 FFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDE 120
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSV-------------------------------SSD 165
IH V K G L V+N L+ Y+ + +
Sbjct: 121 IHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGE 180
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L ARQVF E+ R + WT M+SGYAQ+ R+ EAL LF +M G P+ V + SV+SA
Sbjct: 181 LELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISA 240
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C G LE G +VH ++ GF L AL+ MY K G + A +F++M +++ TW
Sbjct: 241 CTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITW 300
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
N+MIS A+HG+AE+A +F + I P+ +TF+ +L+A H G++D G +F SM+R
Sbjct: 301 NSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQR 360
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
YG+E +EHYGCMVD+LGR G++ EA +LI M + V+WGALLAAC+ +G++E+ E
Sbjct: 361 DYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGE 420
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
RV+K++I L+P+ G Y++L ++Y A +E+
Sbjct: 421 RVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIEL 456
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 173/439 (39%), Positives = 244/439 (55%), Gaps = 40/439 (9%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M Q+KQIH + + Q +LL +L YA ++ + P F++N LI
Sbjct: 1 MRQVKQIHGYTLRNGIDQTKILIEKLLEI------PNLHYAHKVLHHSPKPTLFLYNKLI 54
Query: 88 RAQASSLNPDKAIF-LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
+A +S F LY M F PNQHTF F+ AC+++ S + + +HTH KSG
Sbjct: 55 QAYSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGF 114
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIR----------------------------- 177
+ DL L+ Y+ L AR++FD++
Sbjct: 115 EPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRL 174
Query: 178 --NRTLNVWTTMISGYAQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLEL 234
+R + WTTMISGY++S + EAL LF +M E G PN+VTLAS+ A A G LE+
Sbjct: 175 MPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEI 234
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE-RNIATWNAMISGLA 293
G++V + + GF + A++ MY K G + A +F+ + RN+ +WN+MI GLA
Sbjct: 235 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLA 294
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
HG + L L+ ++ E P+D+TFVG+L AC H G ++ GR IF SM + I PK+
Sbjct: 295 VHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKL 354
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGCMVDLLGR G++ EA E+I+RM KPD V+WGALL AC H N+E+AE + + A
Sbjct: 355 EHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFA 414
Query: 414 LEPNNHGVYVVLSNMYAEA 432
LEP N G YV+LSN+YA A
Sbjct: 415 LEPWNPGNYVILSNIYASA 433
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 243/449 (54%), Gaps = 31/449 (6%)
Query: 15 IPPLSLLADKCKSMHQLKQIHA-------------------------QMIISSRIQDHFA 49
P L K K+ H+ KQ+HA +M + + D +
Sbjct: 134 FPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSS 193
Query: 50 ASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
++F AL S G L A RLF+ I + WN +I S ++AI +
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M+ PN+ T VL AC + RS K I + V +G +L + N L+ Y +
Sbjct: 254 MQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGE 313
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ AR++FD I + + W TMI GY+ EAL LF+ ML +PN VT +L A
Sbjct: 314 TDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHA 373
Query: 226 CAQSGCLELGEKVHVFV-KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
CA G L+LG+ VH ++ K A L T+L+ MY K G + A+ +F SM RN+A+
Sbjct: 374 CACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS 433
Query: 285 WNAMISGLASHGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
WNAM+SG A HGHAE AL LF ++ K P+DITFVGVLSAC AG +D+G Q F SM
Sbjct: 434 WNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSM 493
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ YGI PK++HYGCM+DLL R K EAE L+K M +PD +WG+LL+ACK HG +E
Sbjct: 494 IQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEF 553
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEA 432
E V + + LEP N G +V+LSN+YA A
Sbjct: 554 GEYVAERLFQLEPENAGAFVLLSNIYAGA 582
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 226/440 (51%), Gaps = 40/440 (9%)
Query: 11 PPLPI----PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
PP I P L+LL +KCK+++ KQIH+ +I + F S+L+ FCA+S SGDLS
Sbjct: 21 PPYKILEQHPYLNLL-EKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLS 79
Query: 67 YATRLFNSIQ---SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
YA LF Q N F+WN+LIR + S +P ++ L+ M G PN HTF F+ K
Sbjct: 80 YALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFK 139
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD------------------ 165
+C+ ++ + KQ+H H K L + HV ++ Y+ +
Sbjct: 140 SCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVS 199
Query: 166 -------------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
L++AR++FDEI + + W MISGY QS R EA++ F +M
Sbjct: 200 FTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANV 259
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN T+ VLSAC + ELG+ + +V+ GF L AL+ MY K G A+
Sbjct: 260 LPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARE 319
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
LFD + E+++ +WN MI G + EEAL LF + + + PND+TF+G+L AC G
Sbjct: 320 LFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGA 379
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+D+G+ + + + + ++D+ +CG +EA E + R + ++ W A+L
Sbjct: 380 LDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCG-CIEAAERVFRSMHSRNLASWNAML 438
Query: 393 AACKNHGNIEVAERVVKEII 412
+ HG+ E A + E++
Sbjct: 439 SGFAMHGHAERALALFSEMV 458
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 176/427 (41%), Positives = 258/427 (60%), Gaps = 17/427 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQD---HFAASRLLAFCALSSSGDLSYATRLFNS 74
L L + C + QLKQ+HAQ I ++ F SR+L F SS DL YA R+F+
Sbjct: 29 LLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHF---SSLHDLRYAFRVFHQ 85
Query: 75 IQSPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLN 132
I++PN FMWN LIRA A S + + AI LY M G ++HTF FVLKAC+ + +L+
Sbjct: 86 IENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALS 145
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+QIH + K G D D+++ N LV Y+ L+ A+ VFD + R+L W +I +
Sbjct: 146 EGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFV 205
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ + AL LF +M + FEP+ T+ S+ +ACA G L LG HVF+ ++ F+ +
Sbjct: 206 RFGEFDAALNLFGEM-QKFFEPDGYTIQSIANACAGMGSLSLGMWAHVFL-LKKFDADRV 263
Query: 253 ----LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
L T+LV MY K G+L A LF MP+R++ +WN+MI G ++HG AL+ F +
Sbjct: 264 NDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCM 323
Query: 309 EK-EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ E+++PN ITFVGVLSAC H G + GR+ F M Y I+P++EHYGC+VDLL R G
Sbjct: 324 VRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAG 383
Query: 368 KVLEAEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPN-NHGVYVVL 425
+ EA +++ M +PD+V+W +LL A CK + +E++E + + ++ E GVYV+L
Sbjct: 384 LIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLL 443
Query: 426 SNMYAEA 432
S +YA A
Sbjct: 444 SRVYASA 450
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 242/414 (58%), Gaps = 3/414 (0%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L C++ + KQIH D +A + L+ S+ G L A ++F+ ++
Sbjct: 94 LFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNM--YSNCGCLVSARKVFDKMEDKTV 151
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
W T+I A P++A+ L+ M ++ PN+ T VL AC+ R L K+IH
Sbjct: 152 VSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHE 211
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
++ + G + + L+ Y + AR +FD+ + + L W MI+G+ + E
Sbjct: 212 YIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEE 271
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL+LF +M +G + + VT+AS+L AC G LELG+ +H ++K + ++ LGTALV
Sbjct: 272 ALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVD 331
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G++ A +F MPE+++ TW A+I GLA G AE AL F ++ + + P+ IT
Sbjct: 332 MYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAIT 391
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
FVGVL+AC HAGF+D G F SM YGI+P IEHYG +VD+LGR G++ EAEELIK M
Sbjct: 392 FVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSM 451
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
PD + G LL AC+ HGN+E AER K+++ ++P + G YV+LSN+Y ++
Sbjct: 452 PMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSK 505
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 217/385 (56%), Gaps = 6/385 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M QLKQIHAQM+ + D F AS+++AFC+L SG L YA +F+ I +P + N++I
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R +A+ Y M G P+++TF + K+C N KQIH H +K G
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFA 117
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D + N L+ YS L +AR+VFD++ ++T+ W TMI +AQ + NEA+ LFD+M
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177
Query: 208 LM-EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+ E +PN VTL +VL+ACA++ L + +++H ++ GF +L T L+ +Y K G
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A+ LFD E+N+ +WN MI+G + EEAL LFR+++ + I + +T +L A
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G +++G+ + +K+ I+ + +VD+ +CG + A ++ M K DV+
Sbjct: 298 CTHLGALELGKWLHAYIKK-QRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK-DVM 355
Query: 387 MWGALLAACKNHGNIEVAERVVKEI 411
W AL+ G E A + E+
Sbjct: 356 TWTALILGLAMCGQAENALQYFDEM 380
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 257/453 (56%), Gaps = 43/453 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L ++C ++ LKQ+ A +I Q HF A +LL FC L+ S +LSYA +F+ ++SPN
Sbjct: 61 LLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALS-NLSYARFIFDHVESPNV 119
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+++ +I A AS + A+ LY NM RR PN + VLK+C+ V + +H
Sbjct: 120 YLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMVHC 179
Query: 140 HVSKSGLDLDLHVVNCLVRCY-SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V +SG + V L+ Y SD+ +AR +FDE+ R + WT MISGY + +
Sbjct: 180 QVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLGQIG 239
Query: 199 EALMLFDQM--------------------LME------------------GFEPNSVTLA 220
A++LF++M ME G PN VT
Sbjct: 240 NAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVTAV 299
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
LSAC +G L LG+ +H +V G + + + ALV MY K G L +A+ +FD ER
Sbjct: 300 CSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLER 359
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEK--EQIVPNDITFVGVLSACCHAGFIDVGRQ 338
++ +WN+MI+ LA HG ++ A+ +F ++ + P+++TF+G+L+AC H G ++ G
Sbjct: 360 SLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWL 419
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
F M + YGIEP+IEHYGC+VDLLGR G+ EA E+++ M +PD V+WG+LL CK H
Sbjct: 420 YFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIH 479
Query: 399 GNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
G+ ++AE +K++I ++PNN G ++L+N+Y E
Sbjct: 480 GHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGE 512
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/479 (36%), Positives = 251/479 (52%), Gaps = 63/479 (13%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L KCKS+ +KQI A + + + +LL CA++ L YA RLF I++P+
Sbjct: 11 LFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDV 70
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHT 139
FM+NTLIR + S P A+ L++ MRR A P+ +F F+LKA +N R+L Q+H
Sbjct: 71 FMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHC 130
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--------------------- 178
GLD L V L+ Y+ + L AR+VFDE+
Sbjct: 131 LAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKD 190
Query: 179 ----------RTLNVWTTMISGY-------------------------------AQSFRA 197
R L W M++GY A +
Sbjct: 191 AEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNF 250
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
N+A F ++ EG PN V+L VLSACAQ+G E G +H FV+ GF + AL
Sbjct: 251 NDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNAL 310
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ Y+K G L A+ +FD+M R+ +W AMI+G+A HG+ EEA+ LF ++E+ I P+
Sbjct: 311 IDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDS 370
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
ITF+ +L AC HAG +D+G F M YGIEP IEHYGCMVDL GR GK+ +A + +
Sbjct: 371 ITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVC 430
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+M P+ ++W LL AC HGN+ +A +V +++ L+P N G +V+LSN+YA A K
Sbjct: 431 QMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWK 489
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 258/478 (53%), Gaps = 64/478 (13%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
S L C ++ LKQIHA +II + A L+ A++ SG ++YA ++F I P
Sbjct: 17 SSLWKNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQITEP 76
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ FMWNT++R + S NP K + LY M G P++ TF+F+LK C+ + +H
Sbjct: 77 DIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVH 136
Query: 139 THVSKSGLDLDLHVVNCLV----RC---------------------------YSVSSDLN 167
V K G +++ V N L+ C Y+ +L
Sbjct: 137 GKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELG 196
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ--------------------- 206
ARQ+FDE+ + L W MI+GY ++ A LFD+
Sbjct: 197 VARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGE 256
Query: 207 --MLMEGFE--------PNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGT 255
+E FE P+ VT+ S+LSACA G L++G K+H + +M ++ +LG
Sbjct: 257 QRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGN 316
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIV 314
ALV MY K G++ A +F M E+++ TWN++I GLA HGHAEE++ LF +++ + I
Sbjct: 317 ALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIK 376
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN+ITFVGV+ AC HAG ++ GR+ F M+ Y IEP + H+GCMVDLLGR G + EA E
Sbjct: 377 PNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFE 436
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LI +M +P+ ++W LL AC+ HGN+E+ + ++ L + G YV+LSN+YA A
Sbjct: 437 LIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASA 494
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/416 (38%), Positives = 244/416 (58%), Gaps = 5/416 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L C + + KQ+H D + + L+ S+ G L A ++F+ + + +
Sbjct: 146 LFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNM--YSNCGCLVSARKVFDKMVNKSV 203
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
W T+I A A P +AI L+ M PN+ T VL AC+ R L KQ+H +
Sbjct: 204 VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKY 263
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ ++G+ + + L+ Y AR +F+++ + L W MI+G+ + EA
Sbjct: 264 IDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEA 323
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L LF++M + G + + VT+AS+L AC G LELG+ +HV+++ E+ LGTALV M
Sbjct: 324 LSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDM 383
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G++ A +F MPE+++ TW A+I GLA G +AL+LF +++ ++ P+ ITF
Sbjct: 384 YAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITF 443
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
VGVL+AC HAG ++ G F SM YGI+P IEHYGCMVD+LGR G++ EAE+LI+ M
Sbjct: 444 VGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 503
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
PD + LL+AC+ HGN+ VAER +++I L+P N G YV+LSN+Y+ SMK
Sbjct: 504 MAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYS---SMK 556
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/555 (30%), Positives = 269/555 (48%), Gaps = 65/555 (11%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P L +KC +M QLKQIHAQM+ + D F+AS+++AFCAL SG L YA +FN I
Sbjct: 42 PCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIP 101
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+P F N++IR + P +AI Y M G P++ TF + K+C L KQ
Sbjct: 102 NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQ 158
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H H +K G D ++ N L+ YS L +AR+VFD++ N+++ W TMI YAQ
Sbjct: 159 LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDL 218
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+EA+ LF +M + +PN +TL +VL+ACA+S LE ++VH ++ G +L +A
Sbjct: 219 PHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ +Y K G A+ LF+ MPE+N+ WN MI+G EEAL LF +++ + +
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 338
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+T +L AC H G +++G+ + +++ IE + +VD+ +CG + A +
Sbjct: 339 KVTMASLLIACTHLGALELGKWLHVYIEK-EKIEVDVALGTALVDMYAKCGSIESAMRVF 397
Query: 377 KR------MVW----------------------------KPDVVMWGALLAACKNHGNIE 402
+ M W KPD + + +LAAC + G
Sbjct: 398 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG--- 454
Query: 403 VAERVVKEIIAL---EPNNHGV------YVVLSNMY------AEAESMKMQLEILLVQVL 447
+V E IA PN +G+ Y + +M AEAE + + + +
Sbjct: 455 ----LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 510
Query: 448 FAGLASAADILQN----PDFESPPTNLTPNRSTPFVLL-NGNNTIPGWTFEGTVQYVTAS 502
GL SA I N L P +VLL N +++ W ++ +
Sbjct: 511 LVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVE 570
Query: 503 QTIRLPDNGHAIQLA 517
+ I+ P AI++
Sbjct: 571 RNIKKPPGCSAIEVG 585
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 233/394 (59%), Gaps = 16/394 (4%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L S GDL A ++F+ + WN++I +A+ Y M+ G P++ T
Sbjct: 124 LVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTM 183
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
V+ +C+ + L+ ++ H ++ ++GL L + + N L+ Y +L +AR++FD + N
Sbjct: 184 IGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTN 243
Query: 179 RTLNVWTTM----------------ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+T+ WTTM I GY + R EAL LF++M P+ VT+ S
Sbjct: 244 KTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSC 303
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSAC+Q G L++G +H +++ + LGTAL+ MY K G + KA +F +P RN
Sbjct: 304 LSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNS 363
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TW A+ISGLA HG+A A+ F ++ ++P+++TF+G+LSACCH G ++ GR+ F
Sbjct: 364 LTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQ 423
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M + + PK++HY CMVDLLGR G + EAEELIK M + D V+WGAL AC+ HGN+
Sbjct: 424 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVL 483
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ ER +++ ++P++ G+YV+L+NMY EAE K
Sbjct: 484 MGERAASKLLQMDPHDSGIYVLLANMYGEAEMWK 517
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 214/392 (54%), Gaps = 19/392 (4%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M+++ I+D FA+SRL+AFCA+S DL Y T + + ++PN F WN IR S NP
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 60
Query: 98 KAIFLYMN-MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ LY ++ G P+ +T+ + KAC+ + + +I HV G D D+ V N +
Sbjct: 61 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 120
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ DL+ AR++FD+ R L W +MI+GY + A EAL + +M +EG +P+
Sbjct: 121 IHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDE 180
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
VT+ V+S+CAQ L+LG + H +++ G ++ L AL+ MY K G L A+ LFDS
Sbjct: 181 VTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDS 240
Query: 277 ----------------MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
MP++++ WNAMI G +EAL LF +++ I P+++T
Sbjct: 241 MTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTM 300
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V LSAC G +DVG I +++ + + + ++D+ +CGK+ +A ++ + +
Sbjct: 301 VSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAKCGKITKAIQVFQELP 359
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ + + W A+++ HGN A E+I
Sbjct: 360 GR-NSLTWTAIISGLALHGNAHGAIAYFSEMI 390
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 117/246 (47%), Gaps = 6/246 (2%)
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
F ++++ +S+ T LF+ + + WN +I + +A+ L+ M+ P++
Sbjct: 238 FDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDE 297
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
T L ACS + +L+ IH ++ K L L++ + L+ Y+ + A QVF E
Sbjct: 298 VTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQE 357
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ R WT +ISG A A+ A+ F +M+ P+ VT +LSAC G +E G
Sbjct: 358 LPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEG 417
Query: 236 EKVHVFVKMRG-FEMGAILG--TALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISG 291
K F +M F + L + +V + + G L +A+ L SMP E + W A+
Sbjct: 418 RK--YFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFA 475
Query: 292 LASHGH 297
HG+
Sbjct: 476 CRIHGN 481
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/405 (40%), Positives = 230/405 (56%), Gaps = 39/405 (9%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI--QSPNHFMWNTLI 87
+L+Q+HAQ+I ++ +R+ CA + S YA ++F + Q P F+WN+ +
Sbjct: 76 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPS--FHYAQQIFKCVEKQKPETFVWNSCL 133
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+A A +P AI L+ +R+ P+ T + VL+AC N+ L+ + +H V K G
Sbjct: 134 KALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF- 192
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
WT+MI+GY Q +A EA+ LF +M
Sbjct: 193 ----------------------------------RSWTSMIAGYVQCGKAKEAIHLFAKM 218
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
G + N VT+ +VL+ACA G L+LG ++H + GF+ + L+ MY K G L
Sbjct: 219 EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCL 278
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A +F+ M ER + +W+AMI GLA HG AEEAL LF + + I PN +TF+G+L AC
Sbjct: 279 EEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHAC 338
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G I GR+ F SM R YGI P+IEHYGCMVDLL R G + EA E I M KP+ V+
Sbjct: 339 SHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVV 398
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WGALL AC+ H N+E+AE +K ++ L+P N G YVVLSN+YAEA
Sbjct: 399 WGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEA 443
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 250/483 (51%), Gaps = 65/483 (13%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL + CK++ L QIH I D + +L+ CA+S S L YA RL
Sbjct: 1 LSLL-NSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 59
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQ 136
P+ FM+NTL+R + S P ++ +++ M R GF P+ +F FV+KA N RSL Q
Sbjct: 60 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 119
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYS-------------------------------VSSD 165
+H K GL+ L V L+ Y +D
Sbjct: 120 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 179
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGY-------------------------------AQS 194
+ AR++FD++ R W M++GY A +
Sbjct: 180 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 239
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
NE+ + F ++ G PN V+L VLSAC+QSG E G+ +H FV+ G+ +
Sbjct: 240 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN 299
Query: 255 TALVHMYTKNGALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
AL+ MY++ G + A+ +F+ M E R I +W +MI+GLA HG EEA+ LF ++ +
Sbjct: 300 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 359
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
P+ I+F+ +L AC HAG I+ G F MKRVY IEP+IEHYGCMVDL GR GK+ +A
Sbjct: 360 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 419
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ I +M P ++W LL AC +HGNIE+AE+V + + L+PNN G V+LSN YA A
Sbjct: 420 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 479
Query: 434 SMK 436
K
Sbjct: 480 KWK 482
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 250/412 (60%), Gaps = 2/412 (0%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNSIQSP 78
LL KC S+ +L QI A I S I+D ++L+ FC S + +SYA LF ++ P
Sbjct: 34 LLISKCNSLRELMQIQA-YAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ ++N++ R + NP + L++ + G P+ +TF +LKAC+ ++L +Q+H
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
K GLD +++V L+ Y+ D+++AR VFD I + + MI+GYA+ R N
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LF +M + +PN +TL SVLS+CA G L+LG+ +H + K F + TAL+
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 272
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
M+ K G+L A ++F+ M ++ W+AMI A+HG AE+++ +F ++ E + P++I
Sbjct: 273 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TF+G+L+AC H G ++ GR+ F M +GI P I+HYG MVDLL G + +A E I +
Sbjct: 333 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDK 392
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ P ++W LLAAC +H N+++AE+V + I L+ ++ G YV+LSN+YA
Sbjct: 393 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/404 (39%), Positives = 229/404 (56%), Gaps = 35/404 (8%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
+ +S G L Y+ LF Q+P+ F W +I A ++A+ Y M G PN T
Sbjct: 18 SYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFT 77
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV------------------------- 152
F+ +LK C + K +H+ K G D DL+V
Sbjct: 78 FSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 153 ------VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ ++ CY+ +L+ AR +FD + R W MI GY Q+ NEAL+LF +
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
ML +PN VT+ SVLSAC Q G LE G VH +++ G + +GTALV MY+K G+
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L A+ +FD + ++++ WN+MI G A G ++EAL LF+ + + + P +ITF+G+LSA
Sbjct: 254 LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSA 313
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H+G++ G IF MK YGIEPKIEHYGCMV+LLGR G V +A EL+K M +PD V
Sbjct: 314 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 373
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+WG LL AC+ HG I + E++V+ ++ N G Y++LSN+YA
Sbjct: 374 LWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYA 417
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 140/292 (47%), Gaps = 31/292 (10%)
Query: 156 LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
L R Y+ L+ + +F +N ++ WT +I G+A +AL + QML +G EPN
Sbjct: 15 LQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPN 74
Query: 216 SVTLASVLSACA-------QSGCLELGEKVHVFVKMRGFEMGAILG-------------- 254
+ T +S+L C S ++LG ++V+ ++ A G
Sbjct: 75 AFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 255 ------TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
TA++ Y K+G L A+ LFD M ER+ WN MI G +G EAL LFR++
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
K + PN++T + VLSAC G ++ GR + ++ GI+ + +VD+ +CG
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN-NGIQFNVHVGTALVDMYSKCGS 253
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNN 418
LE L+ + DVV W +++ G + A ++ K + + L P N
Sbjct: 254 -LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTN 304
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 231/382 (60%), Gaps = 6/382 (1%)
Query: 41 SSRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNP 96
+ ++ D + ++++ AL +S G + A +LF+ I + WN +I A + N
Sbjct: 142 ARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY 201
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ L+ +M +T P++ T V+ AC+ S+ +Q+H + G +L +VN L
Sbjct: 202 KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 261
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ YS ++ A +F+ + + + W T+I GY EAL+LF +ML G PN
Sbjct: 262 IDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 321
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
VT+ S+L ACA G +++G +HV++ +++G + L T+L+ MY K G + AK +F
Sbjct: 322 VTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVF 381
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
DSM R++++WNAMI G A HG A A DLF K+ K I P+DITFVG+LSAC H+G +D
Sbjct: 382 DSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLD 441
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+GR IF SM + Y I PK+EHYGCM+DLLG CG EA+E+I+ M +PD V+W +LL A
Sbjct: 442 LGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKA 501
Query: 395 CKNHGNIEVAERVVKEIIALEP 416
CK H N+E+ E + +I +EP
Sbjct: 502 CKMHNNVELGESYAQNLIKIEP 523
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 216/407 (53%), Gaps = 34/407 (8%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRA 89
L+ IHAQMI + ++A S+L+ FC LS D L YA +F +IQ PN +WNT+ R
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
A S +P A++LY+ M G PN +TF F+LK+C+ ++ +QIH HV K G DLD
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 150 LHVVNCLVRCYSVSSDLNNARQV-------------------------------FDEIRN 178
L+V L+ Y + L +AR+V FDEI
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 182
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ + W MISGYA++ EAL LF M+ P+ T+ +V+SACAQSG +ELG +V
Sbjct: 183 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 242
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H+++ GF + AL+ +Y+K G + A LF+ + +++ +WN +I G
Sbjct: 243 HLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYG 357
+EAL LF+++ + PND+T + +L AC H G ID+GR I + KR+ G+
Sbjct: 303 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLT 362
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++D+ +CG + A+++ M+ + + W A++ HG A
Sbjct: 363 SLIDMYAKCGDIEAAKQVFDSMLTR-SLSSWNAMIFGFAMHGKANAA 408
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L A ++F+++ E N+ WN M G A AL L+ + ++PN TF +L
Sbjct: 37 GLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLK 96
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
+C + G+QI G + ++ G + + + ++ + + G++ +A ++ + + DV
Sbjct: 97 SCAKSKAFREGQQIHGHVLKL-GYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR-DV 154
Query: 386 VMWGALLAACKNHGNIEVAERVVKEI 411
V + AL+ + G IE A+++ EI
Sbjct: 155 VSYTALIKGYASRGYIENAQKLFDEI 180
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/408 (39%), Positives = 246/408 (60%), Gaps = 5/408 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
K++ KQ+HAQ+ ++ D A++L+ +C S LS A LF+ I N F+WN
Sbjct: 89 KAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDS---LSSARLLFDRIPKHNIFLWN 145
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
LIR A + + A+ LY M G P+ TF FVLKAC+ + ++ ++IH HV ++
Sbjct: 146 VLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQT 205
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G + D+ V L+ Y+ + +AR+VFD+I R +W +M++ Y+Q+ + L L
Sbjct: 206 GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLC 265
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M++ G P TL + +SA A + L G ++H + FE + TALV MY K
Sbjct: 266 SEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKC 325
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ A+ LF+ + + + +WNAMI+G A HGHA EALDLF ++ + P+ ITFVGVL
Sbjct: 326 GSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNR-VAKPDHITFVGVL 384
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
SAC H G ++ G F +M R Y I+P ++HY CMVDLLG G++ EA LI +M PD
Sbjct: 385 SACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPD 444
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL +CK H N+E+ E ++ +I LEP++ G YV+LSN+YA+A
Sbjct: 445 SGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQA 492
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 176/376 (46%), Gaps = 21/376 (5%)
Query: 58 ALSSSGDLSYATRLFNSIQSPN--------HFMWN-TLIRAQASSLNPDKAIFLYMNMRR 108
ALSS ++ L QSPN F N T ++A S NP +
Sbjct: 17 ALSSLLKPTFFASLSLQYQSPNPSFTSSAPQFDNNQTHLKAIPSCSNP--------HAES 68
Query: 109 TGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN 168
T P + +L++C +++ KQ+H V +G D + LV Y V L++
Sbjct: 69 TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
AR +FD I + +W +I GYA + A+ L+ QM G P++ T VL ACA
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
+E G ++H V G+E +G AL+ MY K G + A+ +FD + R+ WN+M
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSM 248
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVY 347
++ + +GH + L L ++ + P + T V +SA + GR++ G S ++ +
Sbjct: 249 LAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEF 308
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
K++ +VD+ +CG V A L +R+ K VV W A++ HG+ A +
Sbjct: 309 ESHDKVK--TALVDMYAKCGSVRVARNLFERLGVK-RVVSWNAMITGYAMHGHATEALDL 365
Query: 408 VKEIIALEPNNHGVYV 423
+E+ + +H +V
Sbjct: 366 FEEMNRVAKPDHITFV 381
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 276/505 (54%), Gaps = 86/505 (17%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
RQPPL +C+S+ Q+KQ+HA M++ + D A LL A++ G +++A
Sbjct: 10 RQPPL--------WRRCRSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHA 61
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT----GFAPNQHTFTFVLKA 124
+F+ I P+ FM+NTLIR A + P A+ LY M R G P++ TF FVL+A
Sbjct: 62 YLVFDQIPRPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRA 121
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS------VSS-------------- 164
C+ + + Q+H HV K+G + D V N L+ ++ V+S
Sbjct: 122 CTAMGAGGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAW 181
Query: 165 -----------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM------ 207
D+ AR++FDE + W MI+ YA+ A +LF+++
Sbjct: 182 SAMITGCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVV 241
Query: 208 -----------------LMEGFE--------PNSVTLASVLSACAQSGCLELGEKVH--- 239
ME FE P+ VT+ S+LSACA SG +++G ++H
Sbjct: 242 SWNAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSL 301
Query: 240 --VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+F++ GF + ILG AL+ MY K G++ A +F M +++++TWN++I GLA HGH
Sbjct: 302 SEMFLRT-GFTV--ILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGH 358
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E++D+F+K+ KE++ P++ITFV VL AC H G +D GR+ F M+ Y IEP ++HYG
Sbjct: 359 VLESIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYG 418
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVD+LGR G + EA E I M +P+ V+W LL AC+ HG IE+AE ++++ +
Sbjct: 419 CMVDMLGRAGLLKEAFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARND 478
Query: 418 NHGVYVVLSNMYAEA----ESMKMQ 438
G YV+LSN+YA A ES KM+
Sbjct: 479 ESGDYVLLSNIYASAGEWSESEKMR 503
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 162/356 (45%), Gaps = 32/356 (8%)
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLV--RCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
RSL KQ+H + G D + L+ +V + +A VFD+I L ++ T
Sbjct: 19 RSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPRPDLFMYNT 78
Query: 187 MISGYAQSFRANEALMLFDQMLMEG----FEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+I G A + +A+ L+ +M G P+ +T VL AC G G +VH V
Sbjct: 79 LIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHAHV 138
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G E A + AL+ M+ G L A ALFD + W+AMI+G A G A
Sbjct: 139 VKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCARRGDIVAA- 197
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
RKL E V + +++ +++A G + R +F + E + + M+
Sbjct: 198 ---RKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIP-----ERDVVSWNAMISG 249
Query: 363 LGRCGKVLEAEEL---IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
RCG + A EL ++RM KPDVV +LL+AC + G+I+V R+ + +
Sbjct: 250 HVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFLRT- 308
Query: 420 GVYVVLSN----MYAEAESMKMQLEILLV---------QVLFAGLASAADILQNPD 462
G V+L N MYA+ SMK L++ V + GLA +L++ D
Sbjct: 309 GFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESID 364
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 237/406 (58%), Gaps = 3/406 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ Q +QIH ++I + I D + LL+ A G L A +F I N WN +
Sbjct: 422 ALKQGRQIHDRIIKAGYITDDRVRTALLSMYA--KCGSLMDARNVFERISKQNVVAWNAM 479
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I A D A+ + + + G P+ TFT +L C + +L K + + + ++G
Sbjct: 480 ITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGF 539
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ DLH+ N LV + DL +A +F+++ R L W T+I+G+ Q A F
Sbjct: 540 ESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKM 599
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M G +P+ +T +L+ACA L G ++H + + ++GT L+ MYTK G+
Sbjct: 600 MQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGS 659
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A +F ++P++N+ +W +MI+G A HG +EAL+LF ++++E + P+ ITFVG LSA
Sbjct: 660 IDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSA 719
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG I G F SMK + IEP++EHYGCMVDL GR G + EA E I +M KPD
Sbjct: 720 CAHAGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSR 778
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL AC+ H ++E+AE+V ++ + L+PN+ GVYV+LSN+YA A
Sbjct: 779 LWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAA 824
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 203/379 (53%), Gaps = 6/379 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L K K++ ++IH + S D F + L++ A G+ + A ++F+ + +
Sbjct: 113 LCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYA--KCGNTNSAKQIFDEMPDKDV 170
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+ WN L+ ++A L+ M + G P+++TF ++L AC++ ++++ ++ +
Sbjct: 171 YSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSL 230
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ +G D DL V L+ + +++A +VF+ + R L WT+MI+G A+ + +A
Sbjct: 231 ILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQA 290
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
LF M EG +P+ V S+L AC LE G++VH +K G + +GTAL+ M
Sbjct: 291 CNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSM 350
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
YTK G++ A +F+ + RN+ +W AMI+G A HG EEA F K+ + I PN +TF
Sbjct: 351 YTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTF 410
Query: 321 VGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+ +L AC + GRQI +K Y + ++ ++ + +CG +++A + +R
Sbjct: 411 MSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR--TALLSMYAKCGSLMDARNVFER- 467
Query: 380 VWKPDVVMWGALLAACKNH 398
+ K +VV W A++ A H
Sbjct: 468 ISKQNVVAWNAMITAYVQH 486
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 180/342 (52%), Gaps = 2/342 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A ++FN++ + W ++I A +A L+ M G P++ F +L
Sbjct: 254 GGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLL 313
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC++ +L K++H + + GLD +++V L+ Y+ + +A +VF+ ++ R +
Sbjct: 314 KACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVV 373
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT MI+G+AQ R EA + F++M+ G EPN VT S+L AC++ L+ G ++H +
Sbjct: 374 SWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRI 433
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G+ + TAL+ MY K G+L A+ +F+ + ++N+ WNAMI+ H + A+
Sbjct: 434 IKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAV 493
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
F+ L KE I P+ TF +L+ C +++G+ + + R G E + +V +
Sbjct: 494 ATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRA-GFESDLHIRNALVSM 552
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
CG ++ A L M + D+V W ++A HG + A
Sbjct: 553 FVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 186/374 (49%), Gaps = 4/374 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ Q K++HA+M + + + LL+ + G + A +FN ++ N W
Sbjct: 320 EALEQGKRVHARMKEVGLDTEIYVGTALLSM--YTKCGSMEDALEVFNLVKGRNVVSWTA 377
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I A ++A + M +G PN+ TF +L ACS +L +QIH + K+G
Sbjct: 378 MIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAG 437
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D V L+ Y+ L +AR VF+ I + + W MI+ Y Q + + A+ F
Sbjct: 438 YITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQ 497
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+L EG +P+S T S+L+ C LELG+ V + GFE + ALV M+ G
Sbjct: 498 ALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCG 557
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L A LF+ MPER++ +WN +I+G HG + A D F+ +++ + P+ ITF G+L+
Sbjct: 558 DLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLN 617
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC + GR++ + ++ + ++ + +CG + +A L+ + K +V
Sbjct: 618 ACASPEALTEGRRLHALITEA-ALDCDVVVGTGLISMYTKCGSIDDA-HLVFHNLPKKNV 675
Query: 386 VMWGALLAACKNHG 399
W +++ HG
Sbjct: 676 YSWTSMITGYAQHG 689
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 195/344 (56%), Gaps = 9/344 (2%)
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
Q N F+ N L +A S +A+ + +++ ++ T++ +L+ C ++L +
Sbjct: 70 QRANAFL-NRLSKAGQLS----EAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGE 124
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+IH H+ S + D+ + N L+ Y+ + N+A+Q+FDE+ ++ + W ++ GY Q
Sbjct: 125 RIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHR 184
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
R EA L +QM+ +G +P+ T +L+ACA + ++ G ++ + G++ +GT
Sbjct: 185 RYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGT 244
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
AL++M+ K G + A +F+++P R++ TW +MI+GLA H ++A +LF+ +E+E + P
Sbjct: 245 ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQP 304
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
+ + FV +L AC H ++ G+++ MK V G++ +I ++ + +CG + +A E+
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEV-GLDTEIYVGTALLSMYTKCGSMEDALEV 363
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
+V +VV W A++A HG +E A ++I +EPN
Sbjct: 364 FN-LVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPN 406
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 236/410 (57%), Gaps = 33/410 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA--PNQHT 117
S SG + A RLF+ + + WNTLI S P +A+ L+ + G A P++ T
Sbjct: 167 SVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVT 226
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ C+ + L K++H V G+ + ++N ++ Y L A+ VF+ I
Sbjct: 227 MIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERID 286
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF--------------- 212
N+T+ WTTMI G+A+ +A MLFD+M LM G+
Sbjct: 287 NKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHE 346
Query: 213 ------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+PN +T+ ++LSAC+Q G LE+G VH ++ + LGT+LV MY K G
Sbjct: 347 MQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGN 406
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ KA +F +P++N TW AMI GLA+HGHA+EA++ F+++ + P++ITF+GVLSA
Sbjct: 407 IKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCHAG + GRQ F M Y +E K++HY CM+DLLGR G + EAE+L+ M PD V
Sbjct: 467 CCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAV 526
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+WGAL AC+ HGNI + E+ +++ L+P++ G+YV+L+NMYAEA K
Sbjct: 527 VWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRK 576
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 218/437 (49%), Gaps = 56/437 (12%)
Query: 39 IISSRIQDHFAASRLLAFCALS---SSGDLSYATRLFNSIQSP--NHFMWNTLIRAQASS 93
++SS F+ RL+A ALS S L +A + S+ SP + +N RA S
Sbjct: 36 VLSSHSTSPFS-DRLVAAFALSDPASPRPLLHALAILASLPSPPDSASPYNAAFRAL--S 92
Query: 94 LNPDKAIF------LYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
L P + + LY + + A P+ TF F+LKAC+ ++ + HV K G
Sbjct: 93 LCPHRHLVDRHCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGF 152
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D+ VVN V +SVS + AR++FDE R + W T+I GY +S EAL LF +
Sbjct: 153 SADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWR 212
Query: 207 MLMEG--FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
++ +G P+ VT+ +S CAQ G LELG+++H FV +G L A++ MY K
Sbjct: 213 LVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKC 272
Query: 265 GALAKAKA-------------------------------LFDSMPERNIATWNAMISGLA 293
G+L AK+ LFD MPER++ WNA+++G
Sbjct: 273 GSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYV 332
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+ +EA+ LF ++++ ++ PN+IT V +LSAC G +++G + + R + + +
Sbjct: 333 QNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HQLYLSV 391
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVK 409
+VD+ +CG + +A + K + K + + W A++ NHG+ IE +R++
Sbjct: 392 ALGTSLVDMYAKCGNIKKAICIFKEIPDK-NALTWTAMICGLANHGHADEAIEYFQRMID 450
Query: 410 EIIALEPNNHGVYVVLS 426
+ L+P+ VLS
Sbjct: 451 --LGLQPDEITFIGVLS 465
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 253/448 (56%), Gaps = 41/448 (9%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + L ++H ++ Q + A++++ C ++ +++A R+F ++ PN + N
Sbjct: 24 CVTFRDLLRVHGHVVRLRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDPNLHLHN 81
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAP-------NQHTFTFVLKACSNVRSLNCCKQI 137
+I+A A + A+ +Y+ M R +P ++ T+ F+LKAC +L KQ+
Sbjct: 82 AMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQV 141
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR------------------ 179
HTHV +SG D V N L+ Y+ + DL A +VFDE+R R
Sbjct: 142 HTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQM 201
Query: 180 -------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
T+ WT M+SGY A+ F M EGFEP+ V++ +VL AC
Sbjct: 202 RKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPAC 261
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
AQ G LELG ++ + K G + AL+ MY K G + +A LFD M ++++ +W+
Sbjct: 262 AQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWS 321
Query: 287 AMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
+I GLA+HG A EA+ LF ++EKE ++ PN ITFVG+LSAC +AG +D G F M
Sbjct: 322 TVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMND 381
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
VYG+EP +EHYGC+VDLLGR G++ A +L++ M D +WG+LL+AC++HG+++ A
Sbjct: 382 VYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAV 441
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ ++ LEP++ G V+L+N+YA A
Sbjct: 442 LAAERLVELEPDDVGNLVMLANVYAAAR 469
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 43/321 (13%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L+AC R L ++H HV + + ++ +V + + +A +VF ++R+ L
Sbjct: 21 LRACVTFRDL---LRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNL 77
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEP-------NSVTLASVLSACAQSGCLEL 234
++ MI YAQ+ + +A+ ++ +ML P + T +L AC + LEL
Sbjct: 78 HLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALEL 137
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA-------------------------- 268
G++VH V G + AI+ +L+ MYT+ G LA
Sbjct: 138 GKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHAR 197
Query: 269 -----KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
KA ALF+SMP++ I TW AM+SG + G A+D FR ++ E P+D++ V V
Sbjct: 198 LGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAV 257
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC G +++GR I+ KR +G+ ++++ +CG + +A +L M K
Sbjct: 258 LPACAQLGALELGRWIYAYCKR-HGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADK- 315
Query: 384 DVVMWGALLAACKNHGNIEVA 404
DV+ W ++ HG A
Sbjct: 316 DVISWSTVIGGLAAHGRAHEA 336
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 253/448 (56%), Gaps = 41/448 (9%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + L ++H ++ Q + A++++ C ++ +++A R+F ++ PN + N
Sbjct: 24 CVTFRDLLRVHGHVVRLRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDPNLHLHN 81
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAP-------NQHTFTFVLKACSNVRSLNCCKQI 137
+I+A A + A+ +Y+ M R +P ++ T+ F+LKAC +L KQ+
Sbjct: 82 AMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQV 141
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR------------------ 179
HTHV +SG D V N L+ Y+ + DL A +VFDE+R R
Sbjct: 142 HTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQM 201
Query: 180 -------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
T+ WT M+SGY A+ F M EGFEP+ V++ +VL AC
Sbjct: 202 RKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPAC 261
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
AQ G LELG ++ + K G + AL+ MY K G + +A LFD M ++++ +W+
Sbjct: 262 AQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWS 321
Query: 287 AMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
+I GLA+HG A EA+ LF ++EKE ++ PN ITFVG+LSAC +AG +D G F M
Sbjct: 322 TVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMND 381
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
VYG+EP +EHYGC+VDLLGR G++ A +L++ M D +WG+LL+AC++HG+++ A
Sbjct: 382 VYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAV 441
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ ++ LEP++ G V+L+N+YA A
Sbjct: 442 LAAERLVELEPDDVGNLVMLANVYAAAR 469
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 43/328 (13%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L+AC R L ++H HV + + ++ +V + + +A +VF ++R+ L
Sbjct: 21 LRACVTFRDL---LRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNL 77
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEP-------NSVTLASVLSACAQSGCLEL 234
++ MI YAQ+ + +A+ ++ +ML P + T +L AC + LEL
Sbjct: 78 HLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALEL 137
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA-------------------------- 268
G++VH V G + AI+ +L+ MYT+ G LA
Sbjct: 138 GKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHAR 197
Query: 269 -----KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
KA ALF+SMP++ I TW AM+SG + G A+D FR ++ E P+D++ V V
Sbjct: 198 LGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAV 257
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC G +++GR I+ KR +G+ ++++ +CG + +A +L M K
Sbjct: 258 LPACAQLGALELGRWIYAYCKR-HGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADK- 315
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEI 411
DV+ W ++ HG A + E+
Sbjct: 316 DVISWSTVIGGLAAHGRAHEAVWLFTEM 343
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 253/448 (56%), Gaps = 41/448 (9%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + L ++H ++ Q + A++++ C ++ +++A R+F ++ PN + N
Sbjct: 24 CVTFRDLLRVHGHVVRLRISQSSYLATQIVHLC--NAHRRVTHAARVFAQVRDPNLHLHN 81
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAP-------NQHTFTFVLKACSNVRSLNCCKQI 137
+I+A A + A+ +Y+ M R +P ++ T+ F+LKAC +L KQ+
Sbjct: 82 AMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQV 141
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR------------------ 179
HTHV +SG D V N L+ Y+ + DL A +VFDE+R R
Sbjct: 142 HTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQM 201
Query: 180 -------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
T+ WT M+SGY A+ F M EGFEP+ V++ +VL AC
Sbjct: 202 RKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPAC 261
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
AQ G LELG ++ + K G + AL+ MY K G + +A LFD M ++++ +W+
Sbjct: 262 AQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWS 321
Query: 287 AMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
+I GLA+HG A EA+ LF ++EKE ++ PN ITFVG+LSAC +AG +D G F M
Sbjct: 322 TVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMND 381
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
VYG+EP +EHYGC+VDLLGR G++ A +L++ M D +WG+LL+AC++HG+++ A
Sbjct: 382 VYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAV 441
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ ++ LEP++ G V+L+N+YA A
Sbjct: 442 LAAERLVELEPDDVGNLVMLANVYAAAR 469
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 156/328 (47%), Gaps = 43/328 (13%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L+AC R L ++H HV + + ++ +V + + +A +VF ++R+ L
Sbjct: 21 LRACVTFRDL---LRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNL 77
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEP-------NSVTLASVLSACAQSGCLEL 234
++ MI YAQ+ + +A+ ++ +ML P + T +L AC + LEL
Sbjct: 78 HLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALEL 137
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA-------------------------- 268
G++VH V G + AI+ +L+ MYT+ G LA
Sbjct: 138 GKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHAR 197
Query: 269 -----KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
KA ALF+SMP++ I TW AM+SG + G A+D FR ++ E P+D++ V V
Sbjct: 198 LGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAV 257
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC G +++GR I+ KR +G+ ++++ +CG + +A +L M K
Sbjct: 258 LPACAQLGTLELGRWIYAYCKR-HGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADK- 315
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEI 411
DV+ W ++ HG A + E+
Sbjct: 316 DVISWSTVIGGLAAHGRAHEAVWLFTEM 343
>gi|296088310|emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/511 (35%), Positives = 274/511 (53%), Gaps = 87/511 (17%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL +KCK+M +LK++H MI +S IQD SRL+ FCA S SG+L+YA +FN I
Sbjct: 9 LSLL-EKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDR 67
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ ++WN++I+ + S +PD+A+ +Y MR+ G+AP+ TF FVLKACS V N + +
Sbjct: 68 PSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCV 127
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + K+G ++D++ L++ Y+ D+ A +VFD+I + WT++I+G +
Sbjct: 128 HNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCP 187
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE-------MG 250
+EA+ ++ M + PN +T+ +VL ACA+S L G VH G +
Sbjct: 188 SEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFN 247
Query: 251 AILGTALVHMYTKN----------------------------------------GALAKA 270
IL TA+V MY K GAL
Sbjct: 248 VILATAIVDMYAKCAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSG 307
Query: 271 KALFDSMPERNI----ATWNAMISGLASHGHAEEALDLFRKLEKEQI------------- 313
+AL + + N+ A A++ A G AE A +F +L+K+ +
Sbjct: 308 QALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMH 367
Query: 314 -------------------VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
+P++IT++GVLSAC H G ++ G+ F SMK V+GIEP +
Sbjct: 368 GHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQ 427
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGCMVDLL R G++ EAE L+++M +P+ +W ALL CK + NI+VA+RV + + L
Sbjct: 428 HYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNGCKIYQNIDVADRVRRRVREL 487
Query: 415 EPNNHGVYVVLSNMYAEA---ESMKMQLEIL 442
E + GVYV+LSN+YA A E +KM E++
Sbjct: 488 EVDGSGVYVLLSNIYAGACRWEEVKMARELM 518
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 255/440 (57%), Gaps = 33/440 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LS+L C +M LK+IH+Q+I + +D AASR+LAFCA S +GD++YA +F IQ+
Sbjct: 25 LSMLDKNCTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCA-SPAGDINYAYLVFVQIQN 83
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQ 136
PN F WNT+IR + S P +I LY++M T P + T+ V KA + + + Q
Sbjct: 84 PNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQ 143
Query: 137 IHTHVSK-------------------------------SGLDLDLHVVNCLVRCYSVSSD 165
+H + K G+D D+ N ++ +
Sbjct: 144 LHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGL 203
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
++ +R++FD++ R W +MISGY ++ R +AL LF +M +E EP+ T+ S+L+A
Sbjct: 204 VDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNA 263
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CA G + GE +H ++ + FE+ I+ TA++ MY+K G++ KA +F S P R ++ W
Sbjct: 264 CACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCW 323
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
N+MI GLA +G EAL LF L+ + P+D++F+ VL+AC H G +D + F M+
Sbjct: 324 NSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRD 383
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
Y I+P I+H+ CMVD+LGR G + EAEELI+ M PD ++WG+LL +C +GNI++A+
Sbjct: 384 KYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYGNIKMAK 443
Query: 406 RVVKEIIALEPNNHGVYVVL 425
R +I L P+ +V++
Sbjct: 444 RAANHLIELNPSESSSFVLV 463
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 174/448 (38%), Positives = 243/448 (54%), Gaps = 42/448 (9%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
+KC+ M QLK+ HAQ++ D FA SRLLAFC+ G L +A +LF IQ P +
Sbjct: 13 EKCRHMKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICI 72
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
NT+I+A I +Y M G P+ +T +VLKAC+ ++S + + H
Sbjct: 73 CNTMIKAFVLKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSV 132
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G D+ V N L+ YS ++ AR +FDE+ T WT MISGYA+ A M
Sbjct: 133 KLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARM 192
Query: 203 LFDQMLME-------------------------------GFEPNSVTLASVLSACAQSGC 231
LFD+ M+ G EP+ L S+L ACA G
Sbjct: 193 LFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGA 252
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
+E+G VH ++ G + L T L+ MY K G+L AK LFD M +R+ WNAMISG
Sbjct: 253 MEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISG 312
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
+A +G + AL LF ++EK + P+DITF+ + +AC ++G ++ SM VY +EP
Sbjct: 313 MAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEP 372
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD-------VVMWGALLAACKNHGNIEVA 404
K EHYGC+VDLLGR G + EA+ELI +M P+ + W ALL+AC +HG EVA
Sbjct: 373 KSEHYGCIVDLLGRAGLLKEAKELILKM---PNSSSPTEQAIAWRALLSACCSHGQTEVA 429
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAEA 432
E + + LE ++ G YV+LSN+YA A
Sbjct: 430 EDAAQRLFHLE-HHSGAYVLLSNLYAAA 456
>gi|147833682|emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 255/426 (59%), Gaps = 15/426 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQD---HFAASRLLAFCALSSSGDLSYATRLFNS 74
L L + C M QLKQ+HAQ I ++ F SR+L F SS DL YA R+F+
Sbjct: 29 LLLFLNSCTCMSQLKQLHAQTIRTTSSHHPNTFFLYSRILHF---SSLHDLRYAFRVFHQ 85
Query: 75 IQSPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLN 132
I++PN FMWN LIRA A S + + AI LY M G ++HTF FVLKAC+ + +L+
Sbjct: 86 IENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALS 145
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+QIH + K G D B+++ N LV Y+ L+ A+ VFD + R+L W +I +
Sbjct: 146 EGEQIHAQILKLGFDSBVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFV 205
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV--KMRGFEMG 250
+ + AL LF +M + FEP+ T+ S+ +ACA G L LG HVF+ K +
Sbjct: 206 RFGEFDAALNLFGEM-QKFFEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKXDADRVN 264
Query: 251 -AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+L T+LV MY K G+L A LF MP+R++ +WN+MI G ++HG AL+ F +
Sbjct: 265 DVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMV 324
Query: 310 K-EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ E+++PN ITFVGVLSAC H G + GR+ F M Y I+P++EHYGC+VDLL R G
Sbjct: 325 RTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGL 384
Query: 369 VLEAEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPN-NHGVYVVLS 426
+ EA +++ M +PD+V+W +LL A CK + +E++E + ++ E GVYV+LS
Sbjct: 385 IDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMASRVLEAEGGVCSGVYVLLS 444
Query: 427 NMYAEA 432
+YA A
Sbjct: 445 RVYASA 450
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 262/461 (56%), Gaps = 34/461 (7%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
+ +S R+ L L D CKSM +LK+IHA + QD S+LL F ALS +
Sbjct: 1 MNATSFRKIAFLNQTLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPA 60
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
DL Y+ +L ++ +P F WNTLIRA +++ NP+ +I +++ M + G +P+ T+ F++
Sbjct: 61 RDLDYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLV 120
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KA S + + +H H+ KSG ++D + N L+ Y+ D+ +AR+VFDE+ + L
Sbjct: 121 KATSKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLV 180
Query: 183 VWTTMISGYAQSFRAN-------------------------------EALMLFDQMLMEG 211
W M+ GYA+ N EA+ LF++M +G
Sbjct: 181 TWNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDG 240
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
N VTL S L ACA G LE G +H ++ + +L T+LV MY K GA+ +A
Sbjct: 241 PMANEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEAL 300
Query: 272 ALFD--SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
+F S+ E ++ WNA+I GLA+HG +EA++LF +++ IVP++IT++ +LS C H
Sbjct: 301 TVFRACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAH 360
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
G ++ F +++ +G+ PK+EHY CMVD L R G+V EA + + +M +P M G
Sbjct: 361 GGLVEEAWYFFDCLRK-HGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLG 419
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
ALL+ C HG +++A+ V + ++ L+PN+ G YV LSN+YA
Sbjct: 420 ALLSGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGLSNIYA 460
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 235/409 (57%), Gaps = 31/409 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L S GDL A ++F+ + WN++I +A+ Y M+ G P++ T
Sbjct: 152 LVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTM 211
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
V+ +C+ + L+ ++ H ++ ++GL L + + N L+ Y +L +AR++FD + N
Sbjct: 212 IGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTN 271
Query: 179 RTLNVWTTMISGYAQSF-------------------------------RANEALMLFDQM 207
+T+ WTTM+ GYAQS R EAL LF++M
Sbjct: 272 KTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEM 331
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
P+ VT+ S LSAC+Q G L++G +H +++ + LGTAL+ MY K G +
Sbjct: 332 QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKI 391
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
KA +F +P RN TW A+ISGLA HG+A A+ F ++ ++P+++TF+G+LSAC
Sbjct: 392 TKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSAC 451
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
CH G ++ GR+ F M + + PK++HY CMVDLLGR G + EAEELIK M + D V+
Sbjct: 452 CHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVV 511
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
WGAL AC+ HGN+ + ER +++ ++P++ G+YV+L+NMY EAE K
Sbjct: 512 WGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWK 560
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/429 (33%), Positives = 232/429 (54%), Gaps = 35/429 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL +KCKS+ QLKQI +QM+++ I+D FA+SRL+AFCA+S DL Y T + +
Sbjct: 8 PFLSLL-EKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNT 66
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMN-MRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
++PN F WN IR S NP +A+ LY ++ G P+ +T+ + KAC+ + +
Sbjct: 67 RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 126
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+I HV G D D+ V N ++ DL+ AR++FD+ R L W +MI+GY +
Sbjct: 127 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 186
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
A EAL + +M +EG +P+ VT+ V+S+CAQ L+LG + H +++ G ++ L
Sbjct: 187 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 246
Query: 255 TALVHMYTKNGALAKAKALFDS-------------------------------MPERNIA 283
AL+ MY K G L A+ LFDS MP++++
Sbjct: 247 NALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVV 306
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
WNAMI G +EAL LF +++ I P+++T V LSAC G +DVG I +
Sbjct: 307 PWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYI 366
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
++ + + + ++D+ +CGK+ +A ++ + + + + + W A+++ HGN
Sbjct: 367 EK-HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGNAHG 424
Query: 404 AERVVKEII 412
A E+I
Sbjct: 425 AIAYFSEMI 433
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 228/375 (60%), Gaps = 2/375 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S G + A +LF+ I + WN +I A + N +A+ L+ M +T P++ T
Sbjct: 211 ASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMV 270
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ AC+ S+ +Q+H+ + G +L +VN L+ YS +L A +F+ + +
Sbjct: 271 TVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYK 330
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W T+I GY EAL+LF +ML G PN VT+ S+L ACA G +++G +H
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 240 VFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
V++ +++ + L T+L+ MY K G + A +F+S+ +++++WNAMI G A HG
Sbjct: 391 VYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A+ A D+F ++ K I P+DITFVG+LSAC +G +D+GR IF +M + Y I PK+EHYG
Sbjct: 451 ADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYG 510
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CM+DLLG G EAEE+I M +PD V+W +LL ACK GN+E+ E + +I +EP
Sbjct: 511 CMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPE 570
Query: 418 NHGVYVVLSNMYAEA 432
N G YV+LSN+YA A
Sbjct: 571 NPGCYVLLSNIYATA 585
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 263/546 (48%), Gaps = 80/546 (14%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNS 74
P LSLL + CK++ L+ IHAQMI + ++A S+LL C +S D L YA +F +
Sbjct: 35 PSLSLLHN-CKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFET 93
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
IQ PN +WNT+ R A S +P A+ LY+ M G PN +TF F+LK+C+ ++
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD-------------------- 174
+QIH HV K G DLDL V L+ Y + L +AR+VFD
Sbjct: 154 QQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASR 213
Query: 175 -----------EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
EI + + W MISGYA++ EAL LF +M+ P+ T+ +V+
Sbjct: 214 GYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVV 273
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQSG +ELG +VH ++ GF + +L+ +Y+K G L A LF+ + +++
Sbjct: 274 SACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVI 333
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN +I G +EAL LF+++ + PND+T + +L AC H G ID+GR I +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 344 -KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-------------------- 382
KR+ ++D+ +CG + A ++ ++ K
Sbjct: 394 DKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453
Query: 383 --------------PDVVMWGALLAACKNHGNIEVAERVVKEI-----IALEPNNHGVYV 423
PD + + LL+AC G +++ + + + I + ++G +
Sbjct: 454 AFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMI 513
Query: 424 VL---SNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL---TPNRST 476
L S ++ EAE M +E+ V++ L A I N + ES NL P
Sbjct: 514 DLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPG 573
Query: 477 PFVLLN 482
+VLL+
Sbjct: 574 CYVLLS 579
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 246/427 (57%), Gaps = 17/427 (3%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L LL +KCK++ LKQ+HA MI + I + SR+L +SS+ ++A +FN I
Sbjct: 11 PTLQLL-EKCKTLDTLKQVHAHMITTGLIFHTYPLSRILL---ISSTIVFTHALSIFNHI 66
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR---RTGFAPNQHTFTFVLKACSNVRSLN 132
+P F++NTLI + A+ + P I + R T PN TF + KAC + L
Sbjct: 67 PNPTIFLYNTLISSLAN-IKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLR 125
Query: 133 CCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ +HTHV K D V L+ Y+ + R +F++I L W +++S Y
Sbjct: 126 HGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAY 185
Query: 192 AQSFRAN--------EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
+ A E L LF +M + N VTL +++SACA+ G L G HV+V
Sbjct: 186 VHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVL 245
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
++ +GTAL+ MY+K G L A LFD +P R+ +NAMI G A HG+ +ALD
Sbjct: 246 KHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALD 305
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF+K+ E + P+D+T V + +C H G ++ G +F SMK VYG+EPK+EHYGC+VDLL
Sbjct: 306 LFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLL 365
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
GR G++ EAEE + M KP+ V+W +LL A + HGN+E+ E V+K +I LEP G YV
Sbjct: 366 GRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYV 425
Query: 424 VLSNMYA 430
+LSNMYA
Sbjct: 426 LLSNMYA 432
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 142/305 (46%), Gaps = 26/305 (8%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL--NNA 169
PN + L+ ++L+ KQ+H H+ +GL + L R +SS + +A
Sbjct: 3 GPNPSSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYP---LSRILLISSTIVFTHA 59
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQ-SFRANEALMLFDQMLME-GFEPNSVTLASVLSACA 227
+F+ I N T+ ++ T+IS A + A L+ ++L +PN T S+ AC
Sbjct: 60 LSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACG 119
Query: 228 QSGCLELGEKVHVFV-KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
L G +H V K + AL++ Y K G + + LF+ + + ++A+WN
Sbjct: 120 SQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWN 179
Query: 287 AMISGLASHGHA--------EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
+++S + A E L LF +++K I N++T V ++SAC G +
Sbjct: 180 SILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQ--- 236
Query: 339 IFGSMKRVYGIEP--KIEHY--GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G+ VY ++ K+ H+ ++D+ +CG + A +L ++ + D + + A++
Sbjct: 237 --GAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHR-DTLCYNAMIGG 293
Query: 395 CKNHG 399
HG
Sbjct: 294 FAIHG 298
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 159/385 (41%), Positives = 213/385 (55%), Gaps = 40/385 (10%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK------ACSNVRSLNCCKQI 137
N LIRA A S P A+ LY ++ R G P HT +LK A R L +
Sbjct: 175 NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALA--V 232
Query: 138 HTHVSKSGL--------------------------------DLDLHVVNCLVRCYSVSSD 165
H H K GL +D N L+ Y+ +
Sbjct: 233 HAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGR 292
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ +AR +FDE+ R W+ M++GY Q+ EAL LF +M +G P+ L VL+A
Sbjct: 293 VTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAA 352
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CAQ G LE G+ VH ++K + LGTALV MY K G + A +F M E+N+ W
Sbjct: 353 CAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAW 412
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
MI GLA HG EAL+LF ++E+ + P+DI F+G L AC H G +D GR++F SM R
Sbjct: 413 TTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVR 472
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
YGI+PKIEHYGCMVDLL R G + EA E++++M KPD ++WGAL+A C+ H N+E+AE
Sbjct: 473 KYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAE 532
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYA 430
VVK I LEP+ G YV+L N+YA
Sbjct: 533 YVVKHWIELEPDKSGAYVLLGNIYA 557
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 2/246 (0%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A + +G ++ A LF+ + + N W+ ++ + + +A+ L+ M+ G P+
Sbjct: 286 AYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTV 345
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
VL AC+ + L K +H ++ + + + + + LV Y+ ++ A +VF ++
Sbjct: 346 LVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMK 405
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ + WTTMI G A R +EAL LF QM G +P+ + L AC +G ++ G +
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRE 465
Query: 238 V-HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA-TWNAMISGLASH 295
+ V+ G + +V + +NG L +A+ + + MP + A W A+++G H
Sbjct: 466 LFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Query: 296 GHAEEA 301
+ E A
Sbjct: 526 KNVELA 531
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 259/453 (57%), Gaps = 39/453 (8%)
Query: 13 LPIP-PLSLLADKCKSMHQLKQIHAQMIISSRI-QDHFAASRLLAFCALSSSGDLSYATR 70
LP P L++L DK +S+ ++ QIHA ++ + + + L A +S G + ++
Sbjct: 26 LPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLA 85
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
LF+ P+ F++ I + + D+A LY+ + + PN+ TF+ +LK+CS
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST--- 142
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL--------- 181
K IHTHV K GL +D +V LV Y+ D+ +A++VFD + R+L
Sbjct: 143 -KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 182 -----NV-----------------WTTMISGYAQSFRANEALMLFDQMLMEGF-EPNSVT 218
NV W MI GYAQ N+ALMLF ++L EG +P+ +T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
+ + LSAC+Q G LE G +HVFVK + + T L+ MY+K G+L +A +F+ P
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFVGVLSACCHAGFIDVGR 337
++I WNAMI+G A HG++++AL LF +++ + P DITF+G L AC HAG ++ G
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
+IF SM + YGI+PKIEHYGC+V LLGR G++ A E IK M D V+W ++L +CK
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 398 HGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
HG+ + + + + +I L N G+YV+LSN+YA
Sbjct: 442 HGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYA 474
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 252/422 (59%), Gaps = 10/422 (2%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNS 74
P L +L C ++ +L Q+H II Q++ L F + SS+ D + YA L S
Sbjct: 9 PCLDIL-QACNTLPKLAQLHTH-IIKLGFQNNPLV--LTKFTSASSNLDAIPYAMSLVFS 64
Query: 75 IQSP---NHFMWNTLIRAQA-SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
++ + F+++T+IRA A SS + AIF Y M G +PN++ F FVLKAC+ +R
Sbjct: 65 VEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRD 124
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV-SSDLNNARQVFDEIRNRTLNVWTTMIS 189
LN K +H + K G D D+ V N +V Y S + AR++FDE+ WT MI
Sbjct: 125 LNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIG 184
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GYA+ ++ A+ LF +M + G P+ VT+ SVLSAC G LELG+ + +++
Sbjct: 185 GYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLK 244
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
L ALV M+ K G + KA LF +M +R I +W ++I GLA HG EA+ LF +++
Sbjct: 245 TVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMK 304
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+VP DI F+G+LSAC H+G ++ GRQ F M R +GI PKIEHYGCMVDLL R G V
Sbjct: 305 ASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLV 364
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EA E ++RM +P+ ++W L++AC+ HG +++ E + K++I EP + YV+LSN+Y
Sbjct: 365 TEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIY 424
Query: 430 AE 431
+
Sbjct: 425 GK 426
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 255/442 (57%), Gaps = 34/442 (7%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + +LK+IHA ++ S Q +F +++L C S D YAT +F +++PN F +N
Sbjct: 17 CPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVD--YATMIFQQLENPNVFSYN 74
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+IR + AI ++ M T A P++ TF FV+K+C+ + +Q+H HV K
Sbjct: 75 AIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCK 134
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLN-------------------------------NARQV 172
G N L+ Y+ D++ +AR+V
Sbjct: 135 FGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREV 194
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FDE+ RT+ WTTMI+GYA+ +AL +F +M + G EP+ +++ SVL ACAQ G L
Sbjct: 195 FDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGAL 254
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
E+G+ +H + + GF A + ALV MY K G + +A LF+ M E+++ +W+ MI GL
Sbjct: 255 EVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGL 314
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
A+HG A+ +F ++K + PN +TFVGVLSAC HAG + G + F M+ Y +EP+
Sbjct: 315 ANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQ 374
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
IEHYGC+VDLLGR G+V +A + I +M +PD W +LL++C+ H N+E+A +++++
Sbjct: 375 IEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNLEIAVVAMEQLL 434
Query: 413 ALEPNNHGVYVVLSNMYAEAES 434
LEP G YV+L+N+YA+ +
Sbjct: 435 KLEPEESGNYVLLANIYAKLDK 456
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 263/460 (57%), Gaps = 32/460 (6%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GD 64
S+ R +SLL K ++ QLKQI + + +++ ++D +AA+++++ A S++
Sbjct: 2 SASRYLKASKKTISLLDQKGLTISQLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSS 61
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L YA RLF +Q+ + F+WNT+++A +A LY +M + + PN TF+FV++A
Sbjct: 62 LFYAERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRA 121
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C +V +L H V K G + V N L+ Y+ ++ AR +FD R + W
Sbjct: 122 CIDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTW 181
Query: 185 TTMISGYAQSFRA-------------------------------NEALMLFDQMLMEGFE 213
T +ISGY S + EAL +F M + GF
Sbjct: 182 TCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFR 241
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
N ++ L+ACA G L+ G +H +VK + +LGTAL+ MY K G + A ++
Sbjct: 242 LNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSV 301
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
FD M +R++ + +ISGLA+H +E A+DLF +++ E +VPN++TFV VL+AC G +
Sbjct: 302 FDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMV 361
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
D G +IF SM Y IEP+I+HYGC+VDLLGR GK+ EA+++++ M +PD GALL
Sbjct: 362 DEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLD 421
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
AC+ HG++++ E +V ++ ++ GV+V+LSNMYA A+
Sbjct: 422 ACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASAD 461
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 256/438 (58%), Gaps = 34/438 (7%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
KS L QIHA + Q + + ++ CA S ++YA RLF+ +PN F++N+
Sbjct: 20 KSRTHLTQIHAHFLRHGLHQSNQILAHFISVCA--SFNRIAYADRLFSQSHNPNIFLFNS 77
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I+A + S+ +++ L+ +M+ P+Q+TF +LK+C+N+ + + + + V + G
Sbjct: 78 IIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRG 137
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY-------------- 191
+ +V Y + +A ++FDE+ +R + VW MI G+
Sbjct: 138 FYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNVDFGLCLFR 197
Query: 192 -----------------AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
AQ+ R EAL LF QM GF+P+ VT+ ++L C++ G LE+
Sbjct: 198 QMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEV 257
Query: 235 GEKVHVFVKMRGFEMG-AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G+++H + +G +G +G +L+ Y K G + KA +F M +++ +WN +I G A
Sbjct: 258 GQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFA 317
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+G E A+DLF ++ KE + PND TFV VL+AC H+G ++ GR++F SM Y I+PK+
Sbjct: 318 LNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKL 377
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EH+GCMVDLLGR G V EA +LIK M +P+ +WGA+L AC+ HGN+++AE VKE+I+
Sbjct: 378 EHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELIS 437
Query: 414 LEPNNHGVYVVLSNMYAE 431
LEP N G YV+LSNM AE
Sbjct: 438 LEPWNSGNYVLLSNMLAE 455
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/408 (39%), Positives = 244/408 (59%), Gaps = 13/408 (3%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D +AA+ LL A + GD+ A ++F+ I N W +LI S+ P +A+ +Y +
Sbjct: 139 DVYAATALLQMYA--ACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKD 196
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD-------LDLHVVNCLVR 158
M APN+ T VL AC+ R LN + +H + GLD ++ + +V
Sbjct: 197 MELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVD 256
Query: 159 CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVT 218
Y+ L AR +F+++ +R L W +MI Y Q +ANEAL LF M + GF+P+ T
Sbjct: 257 MYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGFDPDKAT 316
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
V+ ACA G L G+ +H +V +GTALV MY K+G +A+ +F +
Sbjct: 317 FLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQ 376
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGR 337
++++ W ++I GLA HGH EEAL F+K++++ ++P++IT++GVLSAC H G ++ G+
Sbjct: 377 KKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDGK 436
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
F SMK V+GIEP +HYGCMVDLL R G++ EAE L+++M +P+ +W ALL CK
Sbjct: 437 NHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNGCKI 496
Query: 398 HGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA---ESMKMQLEIL 442
+ NI+VA+RV + + LE + GVYV+LSN+YA A E +KM E++
Sbjct: 497 YQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELM 544
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 232/419 (55%), Gaps = 13/419 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL +KCK+M +LK++H MI +S IQD SRL+ FCA S SG+L+YA +FN I
Sbjct: 9 LSLL-EKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDR 67
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ ++WN++I+ + S +PD+A+ +Y MR+ G+AP+ TF FVLKACS V N + +
Sbjct: 68 PSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCV 127
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + K+G ++D++ L++ Y+ D+ A +VFD+I + WT++I+G +
Sbjct: 128 HNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCP 187
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE-------MG 250
+EA+ ++ M + PN +T+ +VL ACA+S L G VH G +
Sbjct: 188 SEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFN 247
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
IL TA+V MY K G+L A+ LF+ MP RN+ WN+MI +G A EALDLF +
Sbjct: 248 VILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRI 307
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
P+ TF+ V+ AC H G + G+ + + + + +VD+ + G
Sbjct: 308 AGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKT-NLTDDTAIGTALVDMYAKSGDAE 366
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE---RVVKEIIALEPNNHGVYVVLS 426
A+++ + K DV W +L+ HG+ E A + ++E AL P+ VLS
Sbjct: 367 RAQQVFSELQ-KKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLS 424
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/377 (42%), Positives = 234/377 (62%), Gaps = 6/377 (1%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L A LF+ + N W T+I A ++ LN DKA+ + M R G PN T++ VL+A
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C + +L +Q+H + K+GL+ D+ V + L+ YS SDL+NA VFDE+ R L VW
Sbjct: 165 CDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVW 221
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
++I G+AQ+ NEAL LF +M GF + TL SVL AC LELG +VHV V
Sbjct: 222 NSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHV-- 279
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
F+ IL AL+ MY K G+L A + F M E+++ +W+ M++GLA +G++ +AL+L
Sbjct: 280 LKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALEL 339
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +++ PN IT +GVL AC HAG ++ G F SMK+++G++P EHYGC++DLLG
Sbjct: 340 FESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLG 399
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R G++ EA +LI M +PD V W LL AC+ H N+++A K+II LEP + G Y++
Sbjct: 400 RAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYIL 459
Query: 425 LSNMYAEAESMKMQLEI 441
LSN+YA + + E+
Sbjct: 460 LSNIYANTQRWEDVAEV 476
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 8/294 (2%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M R G + T++ ++K CS ++ K++H H+ G + + VVN L+ Y +
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L A +FDE+ R + WTTMIS Y+ ++AL M EG PN T +SVL A
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C G L ++H + G E + +AL+ +Y+K L A +FD MP R++ W
Sbjct: 165 C--DGLPNL-RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVW 221
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
N++I G A + EAL+LF+++++ + + T VL AC +++GRQ+
Sbjct: 222 NSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVH---VH 278
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
V + + ++D+ +CG + +A RMV K DV+ W ++A +G
Sbjct: 279 VLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEK-DVISWSTMVAGLAQNG 331
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 144/288 (50%), Gaps = 10/288 (3%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + L+Q+H +I + D F S L+ S DL A +F+ + + + +WN
Sbjct: 165 CDGLPNLRQLHCGIIKTGLESDVFVRSALID--VYSKWSDLDNALGVFDEMPTRDLVVWN 222
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
++I A + + ++A+ L+ M+R GF +Q T T VL+AC+ + L +Q+H HV K
Sbjct: 223 SIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK- 281
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
D DL + N L+ Y L +A F + + + W+TM++G AQ+ + +AL LF
Sbjct: 282 -FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELF 340
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAILGTALVHMY 261
+ M G PN +T+ VL AC+ +G +E G + F M+ G + G L+ +
Sbjct: 341 ESMKESGSRPNYITVLGVLFACSHAGLVEKG--WYYFRSMKKLFGVDPGREHYGCLIDLL 398
Query: 262 TKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKL 308
+ G L +A L M E + TW ++ H + + A+ +K+
Sbjct: 399 GRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKI 446
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
+ + + + A+ D M G +++T + ++ C+ G ++ G++VH + +G+
Sbjct: 27 FANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGY 86
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
E + L++MY K L +A+ LFD MPERN+ +W MIS S+ ++AL
Sbjct: 87 EPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLIL 145
Query: 308 LEKEQIVPNDITFVGVLSAC--------CHAGFIDVG 336
+ +E + PN T+ VL AC H G I G
Sbjct: 146 MFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTG 182
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/480 (36%), Positives = 252/480 (52%), Gaps = 64/480 (13%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L KC S+ KQIHAQ+ + D +LL CA++ S L YA RLF+ +P+
Sbjct: 8 LLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPDT 67
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
FM NTLIR+ + S P ++ ++ +RR +P+ TF F LKA +N R L Q+H+
Sbjct: 68 FMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHS 127
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--------------------- 178
+ G D + V L+ Y+ D +AR+VFDE+
Sbjct: 128 QAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEG 187
Query: 179 ----------RTLNVWTTMISGYAQS---------------------------FRAN--- 198
R L W M++GYA++ F N
Sbjct: 188 AQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCF 247
Query: 199 -EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EA F ++L E N V+L VLSACAQ+G E G+ +H FV+ GF + AL
Sbjct: 248 DEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNAL 307
Query: 258 VHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
+ Y+K G +A A+ +F +MP R+I +W ++I+GLA HG EEA+ LF ++E+ + P+
Sbjct: 308 IDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPD 367
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
ITF+ +L AC H+G ++ G +F MK +YGIEP IEHYGCMVDL GR ++ +A E I
Sbjct: 368 GITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFI 427
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
M P+ ++W LL AC HGNIE+AE V + ++P+N G +V+LSN+YA A K
Sbjct: 428 CEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWK 487
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/433 (36%), Positives = 251/433 (57%), Gaps = 34/433 (7%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ IH ++ +S D F ++ L+ F SS GDL A +F+ I + WN++I
Sbjct: 151 QAIHGMVMKASFGSDLFISNSLIHF--YSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFV 208
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+P++A+ L+ M+ PN+ T VL AC+ L + ++ ++G+D++L
Sbjct: 209 QGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLI 268
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA------------------- 192
+ N ++ Y L +AR++FD++ + + WTTMI GYA
Sbjct: 269 LSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRED 328
Query: 193 ------------QSFRANEALMLFDQM-LMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
Q+ + EAL +F ++ L + +PN VTLAS L+ACAQ G ++LG +H
Sbjct: 329 ITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIH 388
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V++K +G ++ + T+L+ MY+K G L KA +F S+ R++ W+AMI+GLA HGH
Sbjct: 389 VYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGR 448
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
A+DLF K+++ ++ PN +TF +L AC H+G +D GR F M+ VYG+ P +HY CM
Sbjct: 449 AAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACM 508
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VD+LGR G + EA ELI++M P +WGALL AC+ +GN+E+AE ++ + NNH
Sbjct: 509 VDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNH 568
Query: 420 GVYVVLSNMYAEA 432
G YV+LSN+YA+A
Sbjct: 569 GAYVLLSNIYAKA 581
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 222/426 (52%), Gaps = 38/426 (8%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P +P +L DKC + LKQ+HA M+ + D +A++L CALSS L YA ++
Sbjct: 30 PSTVP---ILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKV 86
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRS 130
F+ I PN + WNTLIRA ASS P + + +++ M + PN +TF FV+KA + V S
Sbjct: 87 FDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSS 146
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
L + IH V K+ DL + N L+ YS DL++A VF +I + + W +MISG
Sbjct: 147 LLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISG 206
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
+ Q EAL LF +M ME PN VT+ VLSACA+ LE G +++ G ++
Sbjct: 207 FVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDIN 266
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS---------------- 294
IL A++ MY K G+L A+ LFD M E++I +W MI G A
Sbjct: 267 LILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPR 326
Query: 295 ---------------HGHAEEALDLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
+G +EAL +FR+L+ + PN++T L+AC G +D+G
Sbjct: 327 EDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGW 386
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
I +K+ GI+ ++D+ +CG + +A E+ V + DV +W A++A H
Sbjct: 387 IHVYIKK-QGIKLNFHITTSLIDMYSKCGHLEKALEVFYS-VERRDVFVWSAMIAGLAMH 444
Query: 399 GNIEVA 404
G+ A
Sbjct: 445 GHGRAA 450
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 152/297 (51%), Gaps = 8/297 (2%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS--DLNNARQ 171
N T ++ C+N + L KQ+H H+ ++GL D L ++SS L+ A +
Sbjct: 29 NPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACK 85
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE-PNSVTLASVLSACAQSG 230
VFD+I L W T+I +A S + + L++F QML E PNS T V+ A +
Sbjct: 86 VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
L G+ +H V F + +L+H Y+ G L A +F + E++I +WN+MIS
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS 205
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
G G EEAL LF++++ E PN +T VGVLSAC ++ GR ++R GI+
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIER-NGID 264
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
+ M+D+ +CG + +A L +M K D+V W ++ G+ + A RV
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEK-DIVSWTTMIDGYAKVGDYDAARRV 320
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/385 (41%), Positives = 213/385 (55%), Gaps = 40/385 (10%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK------ACSNVRSLNCCKQI 137
N LIRA A S P A+ LY ++ R G P HT +LK A R L +
Sbjct: 175 NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLALA--V 232
Query: 138 HTHVSKSGL--------------------------------DLDLHVVNCLVRCYSVSSD 165
H H K GL +D N L+ Y+ +
Sbjct: 233 HAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYARAGR 292
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ +AR +FDE+ R W+ M++GY Q+ EAL LF +M +G P+ L VL+A
Sbjct: 293 VTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAA 352
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CAQ G LE G+ VH ++K + LGTALV MY K G + A +F M E+N+ W
Sbjct: 353 CAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAW 412
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
MI GLA HG EAL+LF ++E+ + P+DI F+G L AC H G +D GR++F SM R
Sbjct: 413 TTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVR 472
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
YGI+PKIEHYGCMVDLL R G + EA E++++M KPD ++WGAL+A C+ H N+E+AE
Sbjct: 473 KYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAE 532
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYA 430
VVK I LEP+ G YV+L N+YA
Sbjct: 533 YVVKHWIELEPDKSGAYVLLGNIYA 557
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 2/246 (0%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A + +G ++ A LF+ + + N W+ ++ + + +A+ L+ M+ G P+
Sbjct: 286 AYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTV 345
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
VL AC+ + L K +H ++ + + + + + LV Y+ ++ A +VF ++
Sbjct: 346 LVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMK 405
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ + WTTMI G A R +EAL LF QM G +P+ + L AC +G ++ G +
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRE 465
Query: 238 V-HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA-TWNAMISGLASH 295
+ V+ G + +V + +NG L +A+ + + MP + A W A+++G H
Sbjct: 466 LFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Query: 296 GHAEEA 301
+ E A
Sbjct: 526 KNVELA 531
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 256/448 (57%), Gaps = 41/448 (9%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C S L ++HA + S Q + A++++ C ++ G +++ATR+F+ ++ PN + N
Sbjct: 23 CASFRDLLRVHAHAVRLSLSQSSYLATQIVHLC--NAHGRVAHATRVFSQVREPNLHLHN 80
Query: 85 TLIRAQASSLNPDKAIFLYMNM-RRTGF------APNQHTFTFVLKACSNVRSLNCCKQI 137
+I+A A + AI +Y+ M RR F ++ T+ F+LKAC + +L+ KQ+
Sbjct: 81 AMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALDLGKQV 140
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR------------------ 179
H HV +SG + + V N L+ Y+ + DL AR+VFD ++ R
Sbjct: 141 HGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISAHARLGQM 200
Query: 180 -------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
T+ WT ++SGY + + A+ F M MEGFEP+ V++ +VL AC
Sbjct: 201 RKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAVLPAC 260
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
AQ G LELG ++ + + ALV MY K G + +A LF+ M E+++ +W+
Sbjct: 261 AQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKDVISWS 320
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
M+ GLA+HG A+EA+ LF ++E++ V PN ITFVG+LSAC HAG +D G F M
Sbjct: 321 TMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYFDRMND 380
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
VYGIEP +EHYGC+VDLL R G++ +LI M D +WG++L AC++HG+++ A
Sbjct: 381 VYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSHGDVDTAV 440
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ ++ALEP + G V+L+N+YA A
Sbjct: 441 LAAERLVALEPEDVGNLVMLANVYAAAR 468
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 250/446 (56%), Gaps = 32/446 (7%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L + K ++Q+ IHAQ+I + QD F LL C S + YA+R+F +PN
Sbjct: 55 LLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSC--SKCHAIDYASRIFQYTHNPNV 112
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+++ LI SS N AI LY M P+ + +LKAC + +L +++H+
Sbjct: 113 YLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSR 172
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE------------------------- 175
K GL + V ++ Y +L +AR+VF+E
Sbjct: 173 ALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAG 232
Query: 176 -----IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
+R + WT MI G+ ++ N AL F M E PN T+ VLSAC+Q G
Sbjct: 233 AVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG 292
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LE+G VH +++ E+ +G AL++MY++ G++ +A+ +FD M +R++ T+N MIS
Sbjct: 293 ALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 352
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
GL+ +G + +A++LFR + ++ P ++TFVGVL+AC H G +D G +IF SM R YG+E
Sbjct: 353 GLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVE 412
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P+IEHYGCMVDLLGR G++ EA +LI+ M PD +M G LL+ACK H N+E+ E+V K
Sbjct: 413 PQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKV 472
Query: 411 IIALEPNNHGVYVVLSNMYAEAESMK 436
+ + G YV+LS++YA + K
Sbjct: 473 LEDRGQADSGTYVLLSHVYASSGKWK 498
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 252/441 (57%), Gaps = 38/441 (8%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C ++ L+Q M+ QD +R + A S G SYA +F S P+ F +N
Sbjct: 40 CTNLSHLQQTQGFMLTRGLDQDDILLARFIYTSA--SLGLSSYAYSVFISNHRPSIFFYN 97
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I A +SS NP +AI L+ +R G P+ ++F FVLKA + +++ KQIH S
Sbjct: 98 NVIWALSSS-NPTRAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVS 156
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA------------ 192
GLD VV LV+ YS + L++AR++FD + +W M++GYA
Sbjct: 157 GLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARNLF 216
Query: 193 ---------------------QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
Q+ NEA+ LF ML++ +P+ + + +VLSACA G
Sbjct: 217 ECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADLGA 276
Query: 232 LELGEKVHVFVKMRGFEMGAI--LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
L+LGE +H +++ ++ L +L+ MY K+G ++KA+ LF +M + I TW +I
Sbjct: 277 LQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVI 336
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
SGLA HG +EALD+F +EK ++ PN++T + VLSAC H G +++GR IF SM+ YGI
Sbjct: 337 SGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGI 396
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
EPKIEHYGCM+DLLGR G + EA EL++ M + + +WG+LL+A +G+ +A ++
Sbjct: 397 EPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALR 456
Query: 410 EIIALEPNNHGVYVVLSNMYA 430
+ LEP+N G Y +LSN YA
Sbjct: 457 HLSVLEPHNCGNYSLLSNTYA 477
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/408 (39%), Positives = 244/408 (59%), Gaps = 7/408 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFA--ASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
M L+Q+HA ++ FA S+++AFCALS G+++YA +F I PN F WN+
Sbjct: 1 MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
Query: 86 LIR--AQASSLNPDKAIFLYMNMRRTGF-APNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
LI+ +Q +L+ + IFL+ + TG+ PN T FVLKAC+ V + Q+H+HV
Sbjct: 61 LIKGYSQIHTLSKE-PIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVL 119
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G L V LV Y ++ AR+VF+E+ R L WT MISG+A+ +EA+
Sbjct: 120 KDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAME 179
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF +M G +P+++TL SV+SACA +G L++G +H +++ L TALV MY
Sbjct: 180 LFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYA 239
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G + +AK +F MP ++ W++MI G A HG A++A+D F+++ + ++ P+ +TF+
Sbjct: 240 KCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLA 299
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSAC H G + GR+ F S+ +GIEP +EHYGC VDLL R G V EA + M
Sbjct: 300 VLSACAHGGLVSRGRR-FWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIP 358
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
P+ W +LL CK + + E V + ++ LEP N Y+++SN+Y+
Sbjct: 359 PNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYS 406
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/373 (38%), Positives = 226/373 (60%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ GD+S A +F+ + N W LI A D A+ L M++ APN+ T+T
Sbjct: 243 AKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYT 302
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L+ C+ +L K++H ++ +SG ++ VVN L+ Y L AR++F ++ +R
Sbjct: 303 SILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHR 362
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ WT M++GYAQ +EA+ LF +M +G +P+ +T S L++C+ L+ G+ +H
Sbjct: 363 DVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIH 422
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ G+ + L +ALV MY K G++ A+ +F+ M ERN+ W AMI+G A HG
Sbjct: 423 QQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCR 482
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL+ F +++K+ I P+ +TF VLSAC H G ++ GR+ F SM YGI+P +EHY C
Sbjct: 483 EALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCF 542
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G + EAE +I M ++P +WGALL+AC+ H ++E ER + ++ L+P++
Sbjct: 543 VDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDD 602
Query: 420 GVYVVLSNMYAEA 432
G YV LSN+YA A
Sbjct: 603 GAYVALSNIYAAA 615
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 215/407 (52%), Gaps = 10/407 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+ +S+ Q +++HA ++ S + + + LL+ A G L+ A R+F+ I+ N W
Sbjct: 108 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYA--KCGSLTDARRVFDGIRDRNIVSW 165
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+I A + +A Y M+ G P++ TF +L A +N L +++H ++K
Sbjct: 166 TAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAK 225
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+GL+L+ V LV Y+ D++ A+ +FD++ + + WT +I+GYAQ + + AL L
Sbjct: 226 AGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALEL 285
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
++M PN +T S+L C LE G+KVH ++ G+ + AL+ MY K
Sbjct: 286 LEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCK 345
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G L +A+ LF +P R++ TW AM++G A G +EA+DLFR+++++ I P+ +TF
Sbjct: 346 CGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSA 405
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L++C F+ G+ I + G + +V + +CG + +A + +M +
Sbjct: 406 LTSCSSPAFLQEGKSIHQQLVHA-GYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER- 463
Query: 384 DVVMWGALLAACKNHGN----IEVAERVVKEIIALEPNNHGVYVVLS 426
+VV W A++ C HG +E E++ K+ ++P+ VLS
Sbjct: 464 NVVAWTAMITGCAQHGRCREALEYFEQMKKQ--GIKPDKVTFTSVLS 508
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 159/278 (57%), Gaps = 4/278 (1%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F +L+ C+ +RSL +++H + KSG+ + ++ N L+ Y+ L +AR+VFD IR
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+R + WT MI + + EA ++ M + G +P+ VT S+L+A L++G+K
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH+ + G E+ +GT+LV MY K G ++KA+ +FD +PE+N+ TW +I+G A G
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHY 356
+ AL+L K+++ ++ PN IT+ +L C ++ G+++ ++ YG E I
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE--IWVV 336
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++ + +CG + EA +L + + DVV W A++
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMVTG 373
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
R EAL + + M+++G S +L CA+ LE G +VH + G + L
Sbjct: 76 RLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 135
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
L+ MY K G+L A+ +FD + +RNI +W AMI + EA + ++ P
Sbjct: 136 TLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKP 195
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRV-YGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
+ +TFV +L+A + + VG+++ + + +EP++ +V + +CG + +A+
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQV 253
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE--PNN 418
+ ++ K +VV W L+A G ++VA +++++ E PN
Sbjct: 254 IFDKLPEK-NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNK 298
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/397 (40%), Positives = 222/397 (55%), Gaps = 37/397 (9%)
Query: 71 LFNSIQSPNHF-MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
L S Q P + + LIRA + S P A+ LY ++ R G P HT +LK+ +
Sbjct: 27 LLTSGQLPRSVELHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSP 86
Query: 130 SLNCCK----QIHTHVSKSGLD--------------------------------LDLHVV 153
++ +HTH K GLD +D
Sbjct: 87 AVPGAAVLALTVHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTF 146
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L+ Y+ + L +AR +FDE+ R W+ M++GY Q+ EAL +F +M E
Sbjct: 147 NTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVR 206
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P+ L VL+ACAQ G LE G+ VH ++K G ++ GTALV MY+K G + A +
Sbjct: 207 PDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDV 266
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F+ M +N+ W MI GLA HG EA+ LF ++E I P+DI F+GVL AC HAG +
Sbjct: 267 FERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLV 326
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
D GR++F SM R YGI+PKIEHYGCMVDLL R G + EA+E+I++M +PD ++WGAL+A
Sbjct: 327 DKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMA 386
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
C+ H N+E AE V K I LEP+ G YV+LSN+YA
Sbjct: 387 GCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYA 423
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 2/246 (0%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A + +G L+ A LF+ + + N W+ ++ + + +A+ ++ M+ P+
Sbjct: 152 AYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTV 211
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
VL AC+ +L K +H ++ G+ ++L LV YS ++ A VF+ ++
Sbjct: 212 LVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQ 271
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ + WTTMI G A R +EA+MLF QM G P+ + VL AC +G ++ G +
Sbjct: 272 YKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRE 331
Query: 238 V-HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASH 295
+ V+ G + +V + +NG L +AK + MP E + W A+++G H
Sbjct: 332 LFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFH 391
Query: 296 GHAEEA 301
+ E A
Sbjct: 392 KNVEFA 397
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 249/422 (59%), Gaps = 17/422 (4%)
Query: 27 SMHQLKQIHAQM---IISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+M QLKQIHAQ + S+ F + +L + + +L+YATR+F+ +PN FMW
Sbjct: 34 TMPQLKQIHAQTLRTVNSNHPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNPNSFMW 93
Query: 84 NTLIRAQASSLNPD---KAIFLY---MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
NTLIR A S N + KA+ LY M M P+ HTF VLKAC+ SL KQ+
Sbjct: 94 NTLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGKQV 153
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H HV K G + D ++ N LV Y+ L+ A ++F ++ R W MI YA+
Sbjct: 154 HAHVLKHGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYAKGGIF 213
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAILG 254
+ AL +F +M +P+ T+ SV+SACA G L LG VH ++ + ++
Sbjct: 214 DTALRMFGEM-QRVHDPDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVLVN 272
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQI 313
T LV MY K+G L AK +F+SM R++ WN+MI GLA HG A+ AL+ + ++ K E+I
Sbjct: 273 TCLVDMYCKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVEKI 332
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
VPN ITFVGVLSAC H G +D G F M + Y +EP++EHYGC+VDL R G++ EA
Sbjct: 333 VPNSITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEAL 392
Query: 374 ELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPN--NHGVYVVLSNMYA 430
L+ M KPD V+W +LL A CK + ++E++E + K++ E + + GVYV+LS +YA
Sbjct: 393 NLVSEMSIKPDAVIWRSLLDACCKQYASVELSEEMAKQVFESEGSVCSSGVYVLLSKVYA 452
Query: 431 EA 432
A
Sbjct: 453 SA 454
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 272/492 (55%), Gaps = 69/492 (14%)
Query: 8 LRQPPLPIPPLSLL--ADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGD 64
L+ P P +LL C ++++L + A MI ++ IQD F + + A AL+S
Sbjct: 127 LQPPSCPSFKQTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNS--- 183
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLK 123
+ Y F +++PN F++N +I+ P +A+ Y++M + P +TF+ ++K
Sbjct: 184 VHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVK 243
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS---------------------- 161
AC+ + ++ + +H H+ K G + L V LV YS
Sbjct: 244 ACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFA 303
Query: 162 ----VSS-----DLNNARQVFDEIRNRTLNVWTTMISGYA-------------------- 192
VS+ D+++AR++F+E+ R W TMI GYA
Sbjct: 304 WTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDI 363
Query: 193 -----------QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
Q+ + +AL ++ +M + G P+ VT+++V SACA G LELG+++H +
Sbjct: 364 ISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHY 423
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
V +G + +G+ALV MY K G+L + +F + ++N+ WNA+I GLA HG+AE+A
Sbjct: 424 VMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKA 483
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L +F +E+E+I+PN +TF+ +LSAC HAG +D GR F SM R Y I P I HYGCMVD
Sbjct: 484 LRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVD 543
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
+L + G + EA ELIK M ++P+ ++WGALL CK HGN E+AE V++++ LEP N G
Sbjct: 544 MLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGH 603
Query: 422 YVVLSNMYAEAE 433
Y +L +MYAE +
Sbjct: 604 YNLLVSMYAEEK 615
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 29/333 (8%)
Query: 122 LKACSNVRSLN--CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ---VFDEI 176
+K CS + L+ C I T+ + D +V+ + S S LN+ F ++
Sbjct: 143 IKNCSTINELHGLCASMIKTNAIQ-----DCFLVHQFI---SASFALNSVHYPVFAFTQM 194
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELG 235
N + V+ MI G+ AL + ML E P S T +S++ AC +ELG
Sbjct: 195 ENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELG 254
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+ VH + +GFE + TALV Y+K L++A+ +FD M ER+ W AM+S LA
Sbjct: 255 QMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARV 314
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G + A LF ++ + N T+ ++ G ++ +F M I
Sbjct: 315 GDMDSARKLFEEMPER----NTATWNTMIDGYARLGNVESAELLFNQMPT-----KDIIS 365
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWK---PDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ M+ + + +A + M PD V + +AC + G +E+ + + ++
Sbjct: 366 WTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVM 425
Query: 413 ALEPNNHGVYV--VLSNMYAEAESMKMQLEILL 443
+ + N VY+ L +MYA+ S+ + L I
Sbjct: 426 S-QGLNLDVYIGSALVDMYAKCGSLDLSLLIFF 457
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 238/407 (58%), Gaps = 2/407 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ Q KQIH I S D + L+ A G+++ A +LF + + WN +
Sbjct: 236 ALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA--KCGNVNTAHKLFERMPIRDVASWNAI 293
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I + + +A+ + M+ G PN T VL AC+++ +L +QIH + +SG
Sbjct: 294 IGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGF 353
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ + V N LV Y+ ++N+A ++F+ + + + W +ISGY+Q +EAL LF +
Sbjct: 354 ESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIE 413
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M +G +P+S + SVL ACA LE G+++H + GFE ++GT LV +Y K G
Sbjct: 414 MQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGN 473
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A+ LF+ MPE+++ +W MI HGH E+AL LF K+++ + I F +L+A
Sbjct: 474 VNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTA 533
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG +D G Q F MK YG+ PK+EHY C+VDLLGR G + EA +IK M +PD
Sbjct: 534 CSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDAN 593
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+WGALL AC+ H NIE+ E+ K + L+P+N G YV+LSN+YAEA+
Sbjct: 594 VWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQ 640
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 208/373 (55%), Gaps = 4/373 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++H +I D + L + + G L A ++F+ + + WN +I +
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASM--YTKCGSLENARQVFDRMPKRDVVSWNAIIAGYS 197
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ P +A+ L+ M+ G PN T V+ C+++ +L KQIH + +SG++ D+
Sbjct: 198 QNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVL 257
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
VVN LV Y+ ++N A ++F+ + R + W +I GY+ + + +EAL F++M + G
Sbjct: 258 VVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG 317
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+PNS+T+ SVL ACA LE G+++H + GFE ++G ALV+MY K G + A
Sbjct: 318 IKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAY 377
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LF+ MP++N+ WNA+ISG + HGH EAL LF +++ + I P+ V VL AC H
Sbjct: 378 KLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFL 437
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G+QI G R G E + +VD+ +CG V A++L +RM + DVV W +
Sbjct: 438 ALEQGKQIHGYTIRS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTM 495
Query: 392 LAACKNHGNIEVA 404
+ A HG+ E A
Sbjct: 496 ILAYGIHGHGEDA 508
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 187/349 (53%), Gaps = 4/349 (1%)
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
N +W I + +KA+ LY M+RTG P++ F V+KAC + L +++H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ G + D+ V L Y+ L NARQVFD + R + W +I+GY+Q+ +
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LF +M + G +PNS TL SV+ CA LE G+++H + G E ++ LV
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+MY K G + A LF+ MP R++A+WNA+I G + + EAL F +++ I PN I
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
T V VL AC H ++ G+QI G R G E +V++ +CG V A +L +R
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVGNALVNMYAKCGNVNSAYKLFER 382
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVL 425
M K +VV W A+++ HG+ A + E+ A ++P++ + VL
Sbjct: 383 MP-KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVL 430
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/446 (36%), Positives = 251/446 (56%), Gaps = 32/446 (7%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L + + ++Q+ IHAQ+I + QD F LL C+ + D YA+R+F +PN
Sbjct: 55 LLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAID--YASRIFQYTHNPNV 112
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+++ LI SS N +AI LY M P+ + +LKAC + +L +++H+
Sbjct: 113 YLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSR 172
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE------------------------- 175
K G + V ++ Y +L +AR+VF+E
Sbjct: 173 ALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAG 232
Query: 176 -----IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
+R + WT MI G+ ++ N AL F M E PN T+ VLSAC+Q G
Sbjct: 233 AVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG 292
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LE+G VH +++ E+ +G AL++MY++ G++ +A+ +FD M +R++ T+N MIS
Sbjct: 293 ALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 352
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
GL+ +G + +A++LFR + ++ P ++TFVGVL+AC H G +D G +IF SM R Y +E
Sbjct: 353 GLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVE 412
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P+IEHYGCMVDLLGR G++ EA +LI+ M PD +M G LL+ACK H N+E+ E+V KE
Sbjct: 413 PQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKE 472
Query: 411 IIALEPNNHGVYVVLSNMYAEAESMK 436
+ + G YV+LS++YA + K
Sbjct: 473 LEDRGQADSGTYVLLSHVYASSGKWK 498
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/374 (43%), Positives = 230/374 (61%), Gaps = 11/374 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F+ + N W T+I A +++ DKA+ + M R G PN T++ VL
Sbjct: 14 GLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVL 73
Query: 123 KACS---NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+AC N+R L+CC + K GLD D+ V + L+ YS +L NA +VFDE+
Sbjct: 74 RACDGLFNLRQLHCC------IIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTG 127
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L VW+++I+G+AQ+ +EAL LF +M GF TL SVL AC LELG +VH
Sbjct: 128 DLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVH 187
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V V ++ IL AL+ MY K G+L A A+F M E+++ +W+ MI+GLA +G+++
Sbjct: 188 VHVL--KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSK 245
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL LF ++ I PN +T VGVL AC HAG ++ G F SMK ++GI+P EHYGCM
Sbjct: 246 EALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCM 305
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
+DLLGR G++ EA +LI M +PD V W ALL AC+ H N++VA K+I+ L+P +
Sbjct: 306 IDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDA 365
Query: 420 GVYVVLSNMYAEAE 433
G YV+LSN+YA +
Sbjct: 366 GTYVLLSNIYANTQ 379
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 143/268 (53%), Gaps = 9/268 (3%)
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
++N L+ Y L++A+ VFD++ +R + WTTMIS Y+ + ++AL ML EG
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN T +SVL AC G L ++H + G + + +AL+ +Y++ G L A
Sbjct: 62 VRPNMFTYSSVLRAC--DGLFNL-RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M ++ W+++I+G A + +EAL LF+++++ + T VL AC
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+++GRQ+ V + + ++D+ +CG + +A + RMV K DV+ W +
Sbjct: 179 LLELGRQVH---VHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEK-DVISWSTM 234
Query: 392 LAACKNHGNIEVAERVVK--EIIALEPN 417
+A +G + A ++ + +++ ++PN
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPN 262
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/410 (38%), Positives = 235/410 (57%), Gaps = 33/410 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA--PNQHT 117
S G +++A RLF+ + WNTLI S P +A+ L+ + G A P++ T
Sbjct: 167 SVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVT 226
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ C+ + L K++H V G+ + ++N ++ Y L A VF+ I
Sbjct: 227 VIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERIS 286
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF--------------- 212
NRT WTTMI G+A+ +A MLFD+M LM G+
Sbjct: 287 NRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHE 346
Query: 213 ------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+PN +T+ ++LSAC+Q G LE+G VH ++ + LGT+LV MY K G
Sbjct: 347 MQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGN 406
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ KA +F+ +P +N TW +MI GLA+HGHA+EA++ F+++ + P++ITF+GVLSA
Sbjct: 407 IKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCHAG ++ GRQ F M Y +E K++HY CM+DLLGR G + EAE+L+ M PD V
Sbjct: 467 CCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAV 526
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+WGAL AC+ HGNI + E+ +++ L+P++ G+YV+L+NMYAEA K
Sbjct: 527 VWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRK 576
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 222/452 (49%), Gaps = 58/452 (12%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAA---SRLLAFCALS---SSGDLSYATRLFNSIQSP-- 78
S L ++HA ++S + H + RL+A A S S L +A + S+ SP
Sbjct: 20 SFRVLLKLHAHHLVSGLLSSHSTSPFIDRLVAAFAHSDPASPRPLLHALAILASLPSPPD 79
Query: 79 NHFMWNTLIRAQASSLNPDKAIF------LYMNMRRTGFA-PNQHTFTFVLKACSNVRSL 131
+ F +N RA SL P + + LY + +G A P+ TF F++KAC+ ++
Sbjct: 80 SAFPYNAAFRAL--SLCPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYR 137
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ + HV K G D+ VVN + +SV + AR++FDE R + W T+I GY
Sbjct: 138 SYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGY 197
Query: 192 AQSFRANEALMLFDQMLMEG--FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
+S EAL LF ++ +G P+ VT+ +S CAQ G LELG+++H FV +G
Sbjct: 198 VRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRC 257
Query: 250 GAILGTALVHMYTKNGAL-------------------------------AKAKALFDSMP 278
L A++ MY K G+L A+ LFD MP
Sbjct: 258 TVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMP 317
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
ER++ WNA+++G + +EA+ LF +++K ++ PN+IT V +LSAC G +++G
Sbjct: 318 ERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMW 377
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ + R + + + +VD+ +CG + +A + + + + + W +++ NH
Sbjct: 378 VHHYIDR-HKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQ-NALTWTSMICGLANH 435
Query: 399 GN----IEVAERVVKEIIALEPNNHGVYVVLS 426
G+ IE +R++ + L+P+ VLS
Sbjct: 436 GHADEAIEYFQRMID--LGLQPDEITFIGVLS 465
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 40 ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKA 99
+ RI + A S + G + A LF+ + + F WN L+ + +A
Sbjct: 281 VFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEA 340
Query: 100 IFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC 159
I L+ M+++ PN+ T +L ACS + +L +H ++ + L L + + LV
Sbjct: 341 IALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDM 400
Query: 160 YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
Y+ ++ A VF+EI + WT+MI G A A+EA+ F +M+ G +P+ +T
Sbjct: 401 YAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITF 460
Query: 220 ASVLSACAQSGCLELGE--------KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
VLSAC +G +E G K H+ KM+ + + ++ + + G L +A+
Sbjct: 461 IGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHY-------SCMIDLLGRAGHLDEAE 513
Query: 272 ALFDSMP-ERNIATWNAMISGLASHG 296
L ++MP + + W A+ HG
Sbjct: 514 QLVNAMPMDPDAVVWGALFFACRMHG 539
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 256/446 (57%), Gaps = 16/446 (3%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
SS P P L C ++ +L QIH ++ + ++ + +L + D
Sbjct: 20 SSTPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDY 79
Query: 66 SYA--------TRLFNSIQSPNHFMWNTLIRAQASS-LNPDKAIFLYMNMRRTGFAPNQH 116
+ + TRL+++ F++NTLIRA A + + DKA+ LY M PN+
Sbjct: 80 AASFLFSAEADTRLYDA------FLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKF 133
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV-SSDLNNARQVFDE 175
T+ FVLKAC+ + LN + +H V K G D D+HV N +V YS + +N+AR+VFDE
Sbjct: 134 TYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDE 193
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ W+ MI GYA+ R+ EA+ LF +M M P+ +T+ S+LSAC G LELG
Sbjct: 194 MPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELG 253
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+ + +++ + AL+ M+ K G ++KA LF +M E+ I +W ++I G+A H
Sbjct: 254 KWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMH 313
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G +EA LF ++ + P+D+ F+G+LSAC H+G ++ GR+ FGSM + Y + PKIEH
Sbjct: 314 GRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEH 373
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
YGCMVD+ R G V EA E ++ M +P+ V+ L++AC+ HG ++ E++ K ++ E
Sbjct: 374 YGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHE 433
Query: 416 PNNHGVYVVLSNMYAEAESMKMQLEI 441
P + YV+LSN+YA+ S + + +I
Sbjct: 434 PLHESNYVLLSNIYAKTLSWEKKTKI 459
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 255/459 (55%), Gaps = 41/459 (8%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
K+ L +IH + Q + + ++ CA S + YATRLF +PN ++N
Sbjct: 19 KTRSHLTEIHGHFLRHGLQQSNQILAHFVSVCA--SLRRVPYATRLFAHTHNPNILLFNA 76
Query: 86 LIRAQASSLNPD-KAIFLYMNMRRT-GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+I+A SL+P A F + ++ +T +P+++T + K+ SN+R +H HV +
Sbjct: 77 IIKAH--SLHPPFHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLGGCVHAHVVR 134
Query: 144 SGL-------------------------------DLDLHVVNCLVRCYSVSSDLNNARQV 172
G D D+ V N ++R + DL +V
Sbjct: 135 LGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKMGDLETGMKV 194
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
F +++ RT+ W M+S A++ + +AL LF++ML +GFEP+ +L +VL CA+ G +
Sbjct: 195 FGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPVCARLGAV 254
Query: 233 ELGEKVHVFVKMRGFEMGAI-LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
++GE +H + +GF I +G +LV Y K G L A ++F+ M +N+ +WNAMISG
Sbjct: 255 DIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNVVSWNAMISG 314
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
LA +G E ++LF ++ PND TFVGVL+ C H G +D GR +F SM + + P
Sbjct: 315 LAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASMSVKFKVSP 374
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
K+EHYGC+VDLLGRCG V EA +LI M KP +WGALL+AC+ +G+ E+AE KE+
Sbjct: 375 KLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDREIAENAAKEL 434
Query: 412 IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAG 450
+ LEP N G YV+LSN+YAE E+ V+VL G
Sbjct: 435 VRLEPWNSGNYVLLSNVYAEEGRWD---EVEKVRVLMRG 470
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 269/462 (58%), Gaps = 41/462 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL DKCKS+ +LKQ+HA +I QD S++L F ALS+SGD++Y+ R+F+ + S
Sbjct: 18 LSLL-DKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFSQLSS 76
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P F WNT+IR ++S NP +++ +++ M R G AP+ T+ F++KA + + + +
Sbjct: 77 PTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQETGVSV 136
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA----- 192
H H+ K+G + D + N L+ Y+ + A++VFD I+ + + W +M+ GYA
Sbjct: 137 HAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGYAKCGEM 196
Query: 193 ----QSFRA----------------------NEALMLFDQMLMEGFEPNSVTLASVLSAC 226
++F + +EA+ +F++M G + N VT+ SV AC
Sbjct: 197 VMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVSVSCAC 256
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD--SMPERNIAT 284
A G LE G ++ ++ G + +L T+LV MY K GA+ +A +F S + ++
Sbjct: 257 AHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKSQTDVLI 316
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNA+I GLA+HG EE+L LF++++ I P+++T++ +L+AC H G + F S+
Sbjct: 317 WNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFFFESLS 376
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ G+ P EHY CMVD+L R G++ A + I +M +P M GALL+ C NH N+ +A
Sbjct: 377 KC-GMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLSGCINHRNLALA 435
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
E V +++I LEPN+ G Y+ LSNMYA +A SM+ +E
Sbjct: 436 EIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAME 477
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 242/430 (56%), Gaps = 34/430 (7%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H I S D + + L+ F + GDLS A RLF I + WN++I A A
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRF--YGACGDLSMAERLFKGISCKDVVSWNSMISAFAQG 205
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
P+ A+ L++ M R PN T VL AC+ L + + +++ + G+ +DL +
Sbjct: 206 NCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLC 265
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA--------------------- 192
N ++ Y+ +++A+++FDE+ R + WT M+ GYA
Sbjct: 266 NAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIA 325
Query: 193 ----------QSFRANEALMLFDQMLMEGF-EPNSVTLASVLSACAQSGCLELGEKVHVF 241
Q+ + EAL +F+++ + +P+ VTL S LSACAQ G ++LG +HV+
Sbjct: 326 AWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVY 385
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+K G + L ++LV MY K G+L KA +F S+ ER++ W+AMI+GL HG + A
Sbjct: 386 IKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAA 445
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+DLF ++++ ++ PN +TF VL AC HAG +D GR F M+ VYG+ P+++HY CMVD
Sbjct: 446 IDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVD 505
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
+LGR G + EA ELI M P +WGALL AC H N+E+ E +++ LEP NHG
Sbjct: 506 ILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGA 565
Query: 422 YVVLSNMYAE 431
V+LSN+YA+
Sbjct: 566 IVLLSNIYAK 575
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/415 (35%), Positives = 222/415 (53%), Gaps = 35/415 (8%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
DKC S QLK++HA+M+ + D F+AS+L ALSS L YA LF+ I PN +
Sbjct: 33 DKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYT 92
Query: 83 WNTLIRAQASSLNPDKAIFLYMN-MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WNTLIRA ASS +P ++ ++++ + + PN+ TF FV+KA S +++ +H
Sbjct: 93 WNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMA 152
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K +DL+++N LVR Y DL+ A ++F I + + W +MIS +AQ +AL
Sbjct: 153 IKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDAL 212
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
LF +M E PNSVT+ VLSACA+ LE G V +++ +G ++ L A++ MY
Sbjct: 213 ELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMY 272
Query: 262 TKNGALAKAKALFDSMPERN-------------------------------IATWNAMIS 290
TK G++ A+ LFD MPER+ IA WN +IS
Sbjct: 273 TKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLIS 332
Query: 291 GLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
+G +EAL +F +L+ +I P+++T V LSAC G ID+G I +KR GI
Sbjct: 333 AYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKR-EGI 391
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+VD+ +CG + +A E+ V + DV +W A++A HG + A
Sbjct: 392 VLNCHLISSLVDMYAKCGSLEKALEVFYS-VEERDVYVWSAMIAGLGMHGRGKAA 445
>gi|357487485|ref|XP_003614030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515365|gb|AES96988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 254/418 (60%), Gaps = 7/418 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL-FNSIQSPN 79
L + S+ +L Q+ AQ+ ++S D S+L+ F +LS +LS+A +L F+ +P+
Sbjct: 16 LLNSLHSITKLHQLQAQIHLNSLHNDTHILSQLVYFFSLSPFKNLSHARKLVFHFSNNPS 75
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
WN LIR ASS +P ++I+++ MR G PN+ T+ F+ K+C+ L KQ+H
Sbjct: 76 PISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCEGKQVHA 135
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+ K GLD D++V N ++ Y + AR+VFDE+ RT+ W ++++ ++ ++
Sbjct: 136 DLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSD 195
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
+ F +M FEP+ ++ +LS CA+ G L LG VH + ++G + LGTALV
Sbjct: 196 GIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVD 255
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ---IVPN 316
MY K+GAL A+ +F+ M +RN+ TW+AMI GLA HG AEEAL LF + ++ I PN
Sbjct: 256 MYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPN 315
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+T++GVL AC HAG +D G + F M+ V+GI+P + HYG MVD+LGR G + EA I
Sbjct: 316 YVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFI 375
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIE---VAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+ M + PD ++W LL+AC H + + ++V K ++ +EP G V+++NMYAE
Sbjct: 376 QSMPFAPDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYAE 433
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 247/448 (55%), Gaps = 37/448 (8%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK++ + IHA++I + QD F L+ C+ S D YA +F+ + +PN +++
Sbjct: 39 CKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD--YAYDVFSYVSNPNVYLYT 96
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I SS + LY M P+ + T VLKAC L C++IH V K
Sbjct: 97 AMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKL 152
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR-------TLN--------------- 182
G V ++ Y S +L NA+++FDE+ +R +N
Sbjct: 153 GFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELF 212
Query: 183 ---------VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
WT MI G ++ N+AL LF +M ME N T VLSAC+ G LE
Sbjct: 213 QDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALE 272
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG VH FV+ + E+ +G AL++MY++ G + +A+ +F M ++++ ++N MISGLA
Sbjct: 273 LGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA 332
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
HG + EA++ FR + PN +T V +L+AC H G +D+G ++F SMKRV+ +EP+I
Sbjct: 333 MHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQI 392
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGC+VDLLGR G++ EA I+ + +PD +M G LL+ACK HGN+E+ E++ K +
Sbjct: 393 EHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFE 452
Query: 414 LEPNNHGVYVVLSNMYAEAESMKMQLEI 441
E + G YV+LSN+YA + K EI
Sbjct: 453 SENPDSGTYVLLSNLYASSGKWKESTEI 480
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 48/320 (15%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T VL++C N+ + IH + ++ D D VV L+R S ++ A VF
Sbjct: 29 RKTLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 85
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
+ N + ++T MI G+ S R+ + + L+ +M+ P++ + SVL AC C E
Sbjct: 86 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCRE- 144
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-------------- 280
+H V GF +G ++ +Y K+G L AK +FD MP+R
Sbjct: 145 ---IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSE 201
Query: 281 -----------------NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
+ W AMI GL + +AL+LFR+++ E + N+ T V V
Sbjct: 202 CGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCV 261
Query: 324 LSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHY--GCMVDLLGRCGKVLEAEELIKRM 379
LSAC G +++GR + F +R+ ++ ++ ++++ RCG + EA + R+
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRM-----ELSNFVGNALINMYSRCGDINEARRVF-RV 315
Query: 380 VWKPDVVMWGALLAACKNHG 399
+ DV+ + +++ HG
Sbjct: 316 MRDKDVISYNTMISGLAMHG 335
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 159/336 (47%), Gaps = 39/336 (11%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+DH AA+ ++ S G + A LF ++ + W +I + +KA+ L+
Sbjct: 187 RDHVAATVMIN--CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFR 244
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M+ + N+ T VL ACS++ +L + +H+ V ++L V N L+ YS
Sbjct: 245 EMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCG 304
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
D+N AR+VF +R++ + + TMISG A + EA+ F M+ GF PN VTL ++L+
Sbjct: 305 DINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLN 364
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC+ G L++G + VF M K +F+ P+ I
Sbjct: 365 ACSHGGLLDIG--LEVFNSM--------------------------KRVFNVEPQ--IEH 394
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
+ ++ L G EEA +R +E I P+ I +LSAC G +++G +I K
Sbjct: 395 YGCIVDLLGRVGRLEEA---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI---AK 448
Query: 345 RVYGIE-PKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
R++ E P Y + +L GK E+ E+ + M
Sbjct: 449 RLFESENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 245/435 (56%), Gaps = 37/435 (8%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM--WNTLIRA 89
K +H I +S D F + L+ F A S G L A +F I+ N + WN+++
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYA--SCGHLDLAYLVFEMIEGNNKDIVSWNSMVTG 317
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
PDKA+ L+ MR G PN T V+ AC+ +L +++ ++ ++ + ++
Sbjct: 318 FVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN 377
Query: 150 LHVVNC----LVRC---------------------------YSVSSDLNNARQVFDEIRN 178
L+V N V+C Y+ S+ AR +FD +
Sbjct: 378 LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR 437
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFD--QMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+ + W +ISGY QS R EAL +F Q+ G P+ VTL S LSACAQ G +++GE
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE 497
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H ++K ++ L T+L+ MY+K+G + KA +F S+ +++ W+AMI+GLA HG
Sbjct: 498 WIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHG 557
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
E A++LF +++ Q+ PN +TF +L AC H+G +D G+++F M+RVYG+ PK +HY
Sbjct: 558 RGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHY 617
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
CMVD+LGR G + EA + I+ M P +WGALL AC HGN+E+AE+ ++ +EP
Sbjct: 618 SCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEP 677
Query: 417 NNHGVYVVLSNMYAE 431
NHG YV+LSN+YA+
Sbjct: 678 GNHGAYVLLSNLYAK 692
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 217/420 (51%), Gaps = 38/420 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +C S QLKQIHAQM+ ++++ D +AAS L A SS L YA ++F+ I PN
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+ WN LIRA A+S +P +++ +++ M + F PN+ TF ++KA + R K +H
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHG 264
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRA 197
K+ D+ V+N L+ Y+ L+ A VF+ I N+ + W +M++G+ Q
Sbjct: 265 MAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYP 324
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
++AL LF++M EG PN+VT+ SV+SACA++ L LG KV ++ M + A
Sbjct: 325 DKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNAT 384
Query: 258 VHMYTKNGALAKAKAL-------------------------------FDSMPERNIATWN 286
+ M+ K G + A+ L FDSMP ++I WN
Sbjct: 385 IDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWN 444
Query: 287 AMISGLASHGHAEEALDLFRKLE--KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
+ISG G +EAL +FR+L+ K P+ +T + LSAC G +D+G I G +K
Sbjct: 445 VLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIK 504
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ I+ ++D+ + G V +A E+ + DV +W A++A HG E A
Sbjct: 505 KER-IQLNRNLATSLIDMYSKSGDVEKAIEVFHS-IGNKDVFVWSAMIAGLAMHGRGEAA 562
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 248/447 (55%), Gaps = 38/447 (8%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSS-SGDLSYATRLFNSIQSP 78
L CKS Q+KQ+HA++I + I ++LL LSS +SYA +F+ P
Sbjct: 6 FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQP 63
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMN--MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+ F++NT+I+ A S F +R PNQ++F F K C + + +Q
Sbjct: 64 DLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQ 123
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+ H K GL+ +L V N L+ Y + +AR+VFD NR + W M+SGYA+ +
Sbjct: 124 VRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGK 183
Query: 197 ANEALMLFDQM-------------------------------LMEGFEPNSVTLASVLSA 225
+EA LFD+M L +G PN TLAS L+A
Sbjct: 184 MDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAA 243
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP--ERNIA 283
CA L+ G +HV++K +M L L+ MY K G L A LF+S P +R +
Sbjct: 244 CANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVW 303
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
WNAMI G A HG ++EA+++F +++ E++ PN +TFV +L+AC H ++ GR F SM
Sbjct: 304 PWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESM 363
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
Y ++P++EHYGC+VDLLGR G++ EAEE+I M PDV +WGALL+ACK H + E+
Sbjct: 364 ASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEM 423
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYA 430
ERV K + L+PN+ G +V+L+N+Y+
Sbjct: 424 GERVGKIVKELDPNHLGCHVLLANIYS 450
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 248/448 (55%), Gaps = 34/448 (7%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P L D ++ +LKQIH Q++I+ + + + +A A+ + +L Y+ ++ +
Sbjct: 11 PTIALIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCA 70
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNCC 134
P F N++IRA + SL P K+ Y + ++ +P+ +TF F+++ C+ +
Sbjct: 71 KPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ-SACEAG 129
Query: 135 KQIHTHVSKSGLDLDLHV----------VNCLVRCYSV---------------------S 163
+H + K G + D HV ++CL C+ V
Sbjct: 130 PAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKC 189
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
D+ AR +FD + R W MI+GYAQ ++ EAL LF M M+G + N V++ SV+
Sbjct: 190 GDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVV 249
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
+AC G L+ G+ H +++ +M LGTALV MY K G + +A +F M E+N+
Sbjct: 250 TACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVY 309
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
TW+ I GLA +G+ ++ L+LF ++ E I PN+ITF+ VL C GF+D GR F SM
Sbjct: 310 TWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSM 369
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
KR +GIEP++EHYGCMVDL GR G++ EA I M KP WGALL AC+ + N+E+
Sbjct: 370 KRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMEL 429
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAE 431
E +++I +E NHG YV LSN+YA+
Sbjct: 430 GEFASRKLIEVEGKNHGAYVSLSNIYAD 457
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 154/411 (37%), Positives = 239/411 (58%), Gaps = 2/411 (0%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L C S+ +L++IHA +I+S A++LL FCA+S SG L+YA LF+ ++ P
Sbjct: 10 LLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQMECPQT 69
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHT 139
WN++IR A S +P AI Y M F+ P+ TF+FVLKAC +++ CK++H
Sbjct: 70 EAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKCKEVHG 129
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
V + G D D+ V LV+CYS + ARQVFD++ R L W MIS ++Q E
Sbjct: 130 SVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQE 189
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL ++QM E + + TL ++S+CA G L +G ++H F + G + +G AL+
Sbjct: 190 ALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALID 249
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G+L +A +FD M ++I TWN+MI G HG EA+ F+++ + +I PN +T
Sbjct: 250 MYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVT 309
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+G+L C H G + G + F M + ++P+++HYGC+VDL GR GK+ +A E++
Sbjct: 310 FLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNS 369
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
D V+W LL +CK H N+ + E + + L + G ++L+ +YA
Sbjct: 370 S-HNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYA 419
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 163/310 (52%), Gaps = 10/310 (3%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR--CYSVSSDLNNAR 170
N+ +L+ C++++ L ++IH HV SGL + + N L+ SVS L A+
Sbjct: 2 SNEKAILALLQGCNSLKRL---RKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQ 58
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE-PNSVTLASVLSACAQS 229
+F ++ W ++I G+AQS +A++ ++QM+ + F P++ T + VL AC +
Sbjct: 59 LLFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERI 118
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
++VH V G++ I+ T LV Y+ G++ A+ +FD MP R++ WNAMI
Sbjct: 119 KAERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMI 178
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
S + G +EAL + ++ E + + T VG++S+C H G +++G Q+ R G+
Sbjct: 179 SCFSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMH-RFARENGL 237
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ + ++D+ +CG + +A + RM + D+ W +++ HG A +
Sbjct: 238 DQSLYVGNALIDMYAKCGSLDQAILIFDRM-QRKDIFTWNSMIVGYGVHGRGSEAIYCFQ 296
Query: 410 EIIA--LEPN 417
+++ ++PN
Sbjct: 297 QMLEARIQPN 306
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 182/473 (38%), Positives = 266/473 (56%), Gaps = 53/473 (11%)
Query: 9 RQPPLPIPPLSLLAD-----------KCK---SMHQLKQIHAQMIISS--RIQDHFAASR 52
R PL + L++L D +C SM QL +I AQ+I S I + A +
Sbjct: 4 RSSPLLVITLAVLHDYNHRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVK 63
Query: 53 LLAFCALSSSGDLSYATRLFNSIQS-PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGF 111
+ SS G+L ++ +FN S PN F +N L++A + I + N
Sbjct: 64 FIGVS--SSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPN 121
Query: 112 APN--QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV--------RC-- 159
APN ++TFT VLKAC+ + + +++H V+K G + +L V N LV C
Sbjct: 122 APNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIA 181
Query: 160 ---------------------YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
Y S ++ AR VFD + + L W+TMISGYA++ +
Sbjct: 182 QKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYA 241
Query: 199 EALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
+A+ LF QM EG PN VTL SVLSACA G L+LG+ +H F++ E+G LG AL
Sbjct: 242 DAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNAL 301
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
MY K G + +AK +F M ER++ +W+ +I GLA +G+A EA + F ++ ++ + PND
Sbjct: 302 ADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPND 361
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
I+F+G+L+AC HAG +D G + F M +VYGI PKIEHYGC+VDLL R G++ +AE LI
Sbjct: 362 ISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLIN 421
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
M +P+V++WGALL C+ + + E ERVV I+ L+ N+ G V L+N+YA
Sbjct: 422 SMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYA 474
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 247/421 (58%), Gaps = 4/421 (0%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
PPL K + + Q HA ++ D F + L++ SSSG +A+RLF+
Sbjct: 107 FPPLLKAVFKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLIS--GYSSSGLFDFASRLFDG 163
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ + W +I + + +A+ ++ M++TG A N+ T VLKA V +
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 135 KQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ +H ++G + D+ + + LV Y S ++A++VFDE+ +R + WT +I+GY Q
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
S ++ +++F++ML PN TL+SVLSACA G L G +VH ++ E+
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA 343
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT L+ +Y K G L +A +F+ + E+N+ TW AMI+G A+HG+A +A DLF + +
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV 403
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN++TF+ VLSAC H G ++ GR++F SMK + +EPK +HY CMVDL GR G + EA+
Sbjct: 404 SPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAK 463
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
LI+RM +P V+WGAL +C H + E+ + +I L+P++ G Y +L+N+Y+E++
Sbjct: 464 ALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQ 523
Query: 434 S 434
+
Sbjct: 524 N 524
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 207/405 (51%), Gaps = 13/405 (3%)
Query: 30 QLKQIHAQMIISSRI---QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
LKQIH ++ S +D F SRLL C +++ YA RL +Q+ + +W++L
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFL-SRLLRRCCTAAT-QFRYARRLLCQLQTLSIQLWDSL 73
Query: 87 IR--AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
I + +LN + Y +MRR G P++HTF +LKA +R N Q H H+ K
Sbjct: 74 IGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF-QFHAHIVKF 132
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GLD D V N L+ YS S + A ++FD ++ + WT MI G+ ++ A+EA++ F
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAILGTALVHMYTK 263
+M G N +T+ SVL A + + G VH ++++ + +G++LV MY K
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
A+ +FD MP RN+ TW A+I+G ++ + +F ++ K + PN+ T V
Sbjct: 253 CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC H G + GR++ M + IE ++DL +CG + EA + +R+ K
Sbjct: 313 LSACAHVGALHRGRRVHCYMIK-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK- 370
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+V W A++ HG A + +++ + PN VLS
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLS 415
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 298 bits (763), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 220/369 (59%)
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+L+YA R+F+ + + W +I A N ++ + L++ M G PN+ T ++K
Sbjct: 277 NLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVK 336
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
C +L K +H ++G L L + + Y D+ +AR VFD +++ L +
Sbjct: 337 ECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMM 396
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W+ MIS YAQ+ +EA +F M G PN T+ S+L CA++G LE+G+ +H ++
Sbjct: 397 WSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYID 456
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
+G + IL T+ V MY G + A LF +R+I+ WNAMISG A HGH E AL+
Sbjct: 457 KQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALE 516
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF ++E + PNDITF+G L AC H+G + G+++F M +G PK+EHYGCMVDLL
Sbjct: 517 LFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLL 576
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
GR G + EA ELIK M +P++ ++G+ LAACK H NI++ E K+ ++LEP+ G V
Sbjct: 577 GRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNV 636
Query: 424 VLSNMYAEA 432
++SN+YA A
Sbjct: 637 LMSNIYASA 645
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 200/395 (50%), Gaps = 16/395 (4%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++H ++ + D F + L+ S G L+ A LF+ I++ + W+T+IR+
Sbjct: 144 QEVHGFVVKNGFHGDVFVCNALIMM--YSEVGSLALARLLFDKIENKDVVSWSTMIRSYD 201
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV------SKSG 145
S D+A+ L +M P++ + + + L K +H +V KSG
Sbjct: 202 RSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSG 261
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ L +++ V+C +L AR+VFD + ++ WT MI+ Y NE + LF
Sbjct: 262 VPLCTALIDMYVKC----ENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFV 317
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+ML EG PN +T+ S++ C +G LELG+ +H F GF + +L TA + MY K G
Sbjct: 318 KMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCG 377
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ A+++FDS +++ W+AMIS A + +EA D+F + I PN+ T V +L
Sbjct: 378 DVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLM 437
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
C AG +++G+ I + + GI+ + VD+ CG + A L + D+
Sbjct: 438 ICAKAGSLEMGKWIHSYIDK-QGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR-DI 495
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIAL--EPNN 418
MW A+++ HG+ E A + +E+ AL PN+
Sbjct: 496 SMWNAMISGFAMHGHGEAALELFEEMEALGVTPND 530
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 199/414 (48%), Gaps = 18/414 (4%)
Query: 29 HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN-SIQSPNHFMWNTLI 87
H +++H + + ++ HF + +S + SY L S N + + LI
Sbjct: 47 HIQQELHINLNETQQLHGHF----------IKTSSNCSYRVPLAALESYSSNAAIHSFLI 96
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ + P A +Y MR T + VLKAC + S +++H V K+G
Sbjct: 97 TSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFH 156
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D+ V N L+ YS L AR +FD+I N+ + W+TMI Y +S +EAL L M
Sbjct: 157 GDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDM 216
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF--EMGAILGTALVHMYTKNG 265
+ +P+ + + S+ A+ L+LG+ +H +V G + G L TAL+ MY K
Sbjct: 217 HVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCE 276
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
LA A+ +FD + + +I +W AMI+ + E + LF K+ E + PN+IT + ++
Sbjct: 277 NLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVK 336
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
C AG +++G+ + R G + +D+ G+CG V A + K D+
Sbjct: 337 ECGTAGALELGKLLHAFTLR-NGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK-DL 394
Query: 386 VMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLSNMYAEAESMKM 437
+MW A++++ + I+ A + + + PN + V L + A+A S++M
Sbjct: 395 MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTM-VSLLMICAKAGSLEM 447
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 129/255 (50%), Gaps = 5/255 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GD+ A +F+S +S + MW+ +I + A + D+A ++++M G PN+ T +L
Sbjct: 377 GDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLL 436
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
C+ SL K IH+++ K G+ D+ + V Y+ D++ A ++F E +R ++
Sbjct: 437 MICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDIS 496
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV-HVF 241
+W MISG+A AL LF++M G PN +T L AC+ SG L+ G+++ H
Sbjct: 497 MWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKM 556
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASHGH--- 297
V GF +V + + G L +A L SMP R NIA + + ++ H +
Sbjct: 557 VHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKL 616
Query: 298 AEEALDLFRKLEKEQ 312
E A F LE +
Sbjct: 617 GEWAAKQFLSLEPHK 631
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 242/408 (59%), Gaps = 2/408 (0%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C+++ Q++Q+HAQ+ + ++ A++LL G L A LF+ + + + W+
Sbjct: 63 CRNLFQVRQVHAQIATNGAFRNLAVANKLLYM--YVERGALEDAQELFDGMSKRHPYSWS 120
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
++ A N +++ + R+G + ++ V++AC +++ L C + IH K
Sbjct: 121 VIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKC 180
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GLD V LV Y+ + +A Q+F ++ R L WT MI A+S E+L+ F
Sbjct: 181 GLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFF 240
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
D+M +G P+ V L +V+ ACA+ G + + +H ++ G+ + ILGTA++ MY K
Sbjct: 241 DRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ A+ +FD M RN+ TW+AMI+ HG E+AL+LF + + I+PN ITFV +L
Sbjct: 301 GSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLL 360
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC HAG I+ G++ F SM YG+ P ++HY CMVDLLGR G++ EA E+I+ M + D
Sbjct: 361 YACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKD 420
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
V+WGALL AC+ H ++++AERV + ++ L+ G YV+LSN+YA A
Sbjct: 421 EVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANA 468
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 262/449 (58%), Gaps = 20/449 (4%)
Query: 24 KCK--SMHQLKQIHAQMIISS--RIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
KC S+ KQ+HA + + R+ A S+LL ALS G+LS+A F+ I++P+
Sbjct: 11 KCTTLSLPHTKQLHAHLFTTGQFRLPISPARSKLLELYALSL-GNLSFAILTFSQIRTPS 69
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
WN +IR S NP A Y +M + T +FVLKAC+ V + QIHT
Sbjct: 70 TNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHT 129
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
H+ + G D + L+ Y+ ++++A +VFDE+ R + W +ISG+AQ + E
Sbjct: 130 HIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTE 189
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL LF +M ++GF+PN +++ LSACAQ G + GEK+H ++K+ F+M A + ++
Sbjct: 190 ALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVID 249
Query: 260 MYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY K G + KA +F+SM ++I TWN MI A HG +AL+LF K+++ + P+D+
Sbjct: 250 MYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDV 309
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
+++ VL AC H G ++ G ++F SM+ G++P ++HYG +VDLLGR G++ EA +++
Sbjct: 310 SYLAVLCACNHGGLVEEGFRLFNSMENC-GVKPNVKHYGSVVDLLGRAGRLHEAYDIVNS 368
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQ 438
M PD+V+W LL A + H N+E+AE V ++++ + N+ G +V+LSN+YA E
Sbjct: 369 MPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARER---- 424
Query: 439 LEILLVQVLFAGLASAADILQNPDFESPP 467
+A + + ++N D + P
Sbjct: 425 ---------WADVGRVREAMKNRDVKKVP 444
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 244/449 (54%), Gaps = 35/449 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+S+L D C Q+KQ+HA +I + Q + ++L+ SY +F +
Sbjct: 46 MSILHD-CTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
PN F+W +IR A ++ Y MRR G P TF+ + KAC +++ KQ+
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 138 HTH-VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR----------------- 179
H + G DL+V N ++ Y L AR+VFDE+ R
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 180 --------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ WT M++GYAQ+ R EAL F +M G E + VTLA V+SA
Sbjct: 225 MESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 226 CAQSGCLELGEKVHVFVKMRGF--EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
CAQ G ++ + + GF ++G+AL+ MY+K G+ +A +F+ M ERN+
Sbjct: 285 CAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
++++MI G A HG A AL LF + K +I PN +TF+G+LSAC HAG ++ GRQ+F M
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
++ +G+ P +HY CMVDLLGR G + EA +L+K M +P+ +WGALL AC+ HGN ++
Sbjct: 405 EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDI 464
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEA 432
A+ E+ LEPN G Y++LSN+YA A
Sbjct: 465 AQIAANELFKLEPNGIGNYILLSNIYASA 493
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 255/462 (55%), Gaps = 44/462 (9%)
Query: 6 SSLRQPPLPIPPLSLLAD-KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
SS+R P L LL + +M Q KQIHA I ++ + + +SR+LAF A S GD
Sbjct: 18 SSIRNSPC----LHLLQQWQNLTMKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGD 73
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
YA LF + +PN F +N++I + ++ DK++ ++ M PN HTFT ++K+
Sbjct: 74 FRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKS 133
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C + SL +Q+ T KSG D++ V+ ++ +S ++ ARQVFDE NR + W
Sbjct: 134 CVTLSSL---EQVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCW 190
Query: 185 TTMISGYAQSFRANEALMLFDQM----------LMEGFEPNS------------------ 216
T+++SGY NE +FD+M ++ G+ NS
Sbjct: 191 TSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKG 250
Query: 217 --------VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
L SVL+AC G E G+ +H +V+ G E LGTAL+ Y K G +
Sbjct: 251 RARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVK 310
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A+ +FD M +++ATW+AMI GLA +G+ + AL+LF K+EK PN++TFVGVL+AC
Sbjct: 311 DAEKVFDKMLVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACN 370
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H ++FG M Y I P IEHYGC+VD+L R G+V +A I M +PD +W
Sbjct: 371 HKSLFGESSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIW 430
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
G+LL C HG+ E+ ++V K +I +P + G YV+L+NMYA
Sbjct: 431 GSLLNGCLMHGHYELGQKVGKYLIEFDPEHSGRYVLLANMYA 472
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 245/425 (57%), Gaps = 6/425 (1%)
Query: 11 PPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
P I LS+L D C + L K +HAQ + + + D A+ L+ G +
Sbjct: 260 KPNRISFLSIL-DGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRM--YMGCGSIEG 316
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A R+F+ ++ + W +IR A + N + A L+ M+ G P++ T+ ++ AC++
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
L+ ++IH+ V ++G DL V LV Y+ + +ARQVFD + R + W+ M
Sbjct: 377 SADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAM 436
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I Y ++ EA F M EP+ VT ++L+AC G L+LG +++
Sbjct: 437 IGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADL 496
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+G AL++M K+G++ +A+ +F++M +R++ TWN MI G + HG+A EALDLF +
Sbjct: 497 VSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDR 556
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ KE+ PN +TFVGVLSAC AGF++ GR+ F + GI P +E YGCMVDLLGR G
Sbjct: 557 MLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAG 616
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
++ EAE LI RM KP+ +W LLAAC+ +GN++VAER + + EP + VYV LS+
Sbjct: 617 ELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSH 676
Query: 428 MYAEA 432
MYA A
Sbjct: 677 MYAAA 681
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 217/414 (52%), Gaps = 13/414 (3%)
Query: 20 LLADKCKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
++ D C S LK + HAQ+I + D + L++ G + A ++F+ +
Sbjct: 167 IVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSM--YVKGGSMDGARQVFDGLY 224
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+ +N +I A S + +KA L+ M++ GF PN+ +F +L CS +L K
Sbjct: 225 KRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKA 284
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H +GL D+ V L+R Y + AR+VFD+++ R + WT MI GYA++
Sbjct: 285 VHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSN 344
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+A LF M EG +P+ +T +++ACA S L L ++H V GF ++ TA
Sbjct: 345 IEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTA 404
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
LVHMY K GA+ A+ +FD+M R++ +W+AMI +G EEA + F +++ + P+
Sbjct: 405 LVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPD 464
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+T++ +L+AC H G +D+G +I+ + + I ++++ + G + A +
Sbjct: 465 VVTYINLLNACGHLGALDLGMEIYTQAIKA-DLVSHIPVGNALINMNVKHGSIERARYIF 523
Query: 377 KRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALEPNNHGVYVVLS 426
+ MV + DVV W ++ HGN +++ +R++KE PN+ VLS
Sbjct: 524 ENMVQR-DVVTWNVMIGGYSLHGNAREALDLFDRMLKE--RFRPNSVTFVGVLS 574
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 189/374 (50%), Gaps = 6/374 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+ +I S R + + + L+ ++ G++ A + F+S+++ WN +I A
Sbjct: 81 KQVRDHIIQSGRQLNIYELNTLIKLHSIC--GNMLEARQTFDSVENKTVVTWNAIIAGYA 138
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A L+ M P+ TF VL ACS+ L K+ H V K G D
Sbjct: 139 QLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFR 198
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y ++ ARQVFD + R ++ + MI GYA+S +A LF +M EG
Sbjct: 199 IGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEG 258
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+PN ++ S+L C+ L G+ VH G + TAL+ MY G++ A+
Sbjct: 259 FKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGAR 318
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M R++ +W MI G A + + E+A LF +++E I P+ IT++ +++AC +
Sbjct: 319 RVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSA 378
Query: 332 FIDVGRQIFGSMKRV-YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ + R+I + R +G + ++ +V + +CG + +A ++ M + DVV W A
Sbjct: 379 DLSLAREIHSQVVRAGFGTDLLVDT--ALVHMYAKCGAIKDARQVFDAMS-RRDVVSWSA 435
Query: 391 LLAACKNHGNIEVA 404
++ A +G E A
Sbjct: 436 MIGAYVENGCGEEA 449
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 155/291 (53%), Gaps = 2/291 (0%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ T+ + + C +R KQ+ H+ +SG L+++ +N L++ +S+ ++ ARQ F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
D + N+T+ W +I+GYAQ EA LF QM+ E EP+ +T VL AC+ L+
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG++ H V GF +GTALV MY K G++ A+ +FD + +R+++T+N MI G A
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
G E+A LF ++++E PN I+F+ +L C + G+ + G+ +
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNT-GLVDDV 298
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++ + CG + A + +M + DVV W ++ + NIE A
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKMKVR-DVVSWTVMIRGYAENSNIEDA 348
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 272/492 (55%), Gaps = 69/492 (14%)
Query: 8 LRQPPLPIPPLSLL--ADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGD 64
L+ P P +LL C ++++L + A MI ++ IQD F + + A AL+S
Sbjct: 30 LQPPSRPSFKQTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNS--- 86
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLK 123
+ Y F +++PN F++N +I+ P +A+ Y++M + P +TF+ ++K
Sbjct: 87 VHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVK 146
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV--------------------- 162
AC+ + ++ + +H H+ K G + L V LV YS
Sbjct: 147 ACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFA 206
Query: 163 ----------SSDLNNARQVFDEIRNR---TLNV-------------------------- 183
D+++AR++F+E+ R T N
Sbjct: 207 WTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDI 266
Query: 184 --WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
WTTMI+ Y+Q+ + +AL ++ +M + G P+ VT+++V SACA G LELG+++H +
Sbjct: 267 ISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHY 326
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
V +G + +G+ALV MY K G+L + +F + ++N+ WNA+I GLA HG+AE+A
Sbjct: 327 VMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKA 386
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L +F +E+E+I+PN +TF+ +LSAC HAG +D GR F SM R Y I P I HYGCMVD
Sbjct: 387 LRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVD 446
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
+L + G + EA ELIK M ++P+ ++WGALL CK HGN E+AE V++++ LEP N G
Sbjct: 447 MLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGH 506
Query: 422 YVVLSNMYAEAE 433
Y +L +MYAE +
Sbjct: 507 YNLLVSMYAEEK 518
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 29/333 (8%)
Query: 122 LKACSNVRSLN--CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ---VFDEI 176
+K CS + L+ C I T+ + D +V+ + S S LN+ F ++
Sbjct: 46 IKNCSTINELHGLCASMIKTNAIQ-----DCFLVHQFI---SASFALNSVHYPVFAFTQM 97
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELG 235
N + V+ MI G+ AL + ML E P S T +S++ AC +ELG
Sbjct: 98 ENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELG 157
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+ VH + +GFE + TALV Y+K L++A+ +FD M ER+ W AM+S LA
Sbjct: 158 QMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARV 217
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G + A RKL +E N T+ ++ G ++ +F M I
Sbjct: 218 GDMDSA----RKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPT-----KDIIS 268
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWK---PDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ M+ + + +A + M PD V + +AC + G +E+ + + ++
Sbjct: 269 WTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVM 328
Query: 413 ALEPNNHGVYV--VLSNMYAEAESMKMQLEILL 443
+ + N VY+ L +MYA+ S+ + L I
Sbjct: 329 S-QGLNLDVYIGSALVDMYAKCGSLDLSLLIFF 360
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 244/449 (54%), Gaps = 35/449 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+S+L D C Q+KQ+HA +I + Q + ++L+ SY +F +
Sbjct: 46 MSILHD-CTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
PN F+W +IR A ++ Y MRR G P TF+ + KAC +++ KQ+
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 138 HTH-VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR----------------- 179
H + G DL+V N ++ Y L AR+VFDE+ R
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 180 --------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ WT M++GYAQ+ R EAL F +M G E + VTLA V+SA
Sbjct: 225 MESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 226 CAQSGCLELGEKVHVFVKMRGF--EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
CAQ G ++ + + GF ++G+AL+ MY+K G+ +A +F+ M ERN+
Sbjct: 285 CAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
++++MI G A HG A AL LF + K +I PN +TF+G+LSAC HAG ++ GRQ+F M
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKM 404
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
++ +G+ P +HY CMVDLLGR G + EA +L+K M +P+ +WGALL AC+ HGN ++
Sbjct: 405 EKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDI 464
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEA 432
A+ E+ LEPN G Y++LSN+YA A
Sbjct: 465 AQIAANELFKLEPNGIGNYILLSNIYASA 493
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 234/409 (57%), Gaps = 31/409 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L S G+LS A +FN + + WN++I +AI +Y M PN+ T
Sbjct: 203 LLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITM 262
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
++ +CS V+ LN K+ H ++ + GL+ + + N L+ Y +L AR +FD +
Sbjct: 263 IGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQ 322
Query: 179 RTLNVWTTMISGYA-------------------------------QSFRANEALMLFDQM 207
+TL WTTM+ GYA Q+ + EAL LF +M
Sbjct: 323 KTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM 382
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+ EP+ VT+ + LSAC+Q G L++G +H +++ + LGTALV MY K G +
Sbjct: 383 QIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNI 442
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+A +F+ +P+RN TW A+I GLA HG+A++AL F K+ IVP++ITF+GVLSAC
Sbjct: 443 ARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSAC 502
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
CH G ++ GR+ F M + + PK++HY CMVDLLGR G + EAEEL+K M D +
Sbjct: 503 CHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAV 562
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
GAL AC+ +GN+++ ER +++ ++P + G YV+L++MY+EA+ K
Sbjct: 563 LGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 219/431 (50%), Gaps = 39/431 (9%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S +R+ PL LS+L ++CKS+ QLKQI AQM+ + I++ FAASRL+AFCALS S +L
Sbjct: 53 SFVRENPL----LSIL-ERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKEL 107
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKA 124
Y TR+ I+ N F WN IR S + + LY M G P+ HT+ +LK
Sbjct: 108 DYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKG 167
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C S + HV K G + D+ V N + +L+ A VF++ R R L W
Sbjct: 168 CCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTW 227
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+MI+G + A EA+ ++ +M E PN +T+ ++S+C+Q L LG++ H ++K
Sbjct: 228 NSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKE 287
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSM--------------------------- 277
G E L AL+ MY K G L A+ LFD+M
Sbjct: 288 HGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREI 347
Query: 278 ----PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
PE+++ WNA+ISG +EAL LF +++ I P+ +T V LSAC G +
Sbjct: 348 LYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGAL 407
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
DVG I ++R + + + +VD+ +CG + A ++ + + + + + W A++
Sbjct: 408 DVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQR-NCLTWTAVIC 465
Query: 394 ACKNHGNIEVA 404
HGN + A
Sbjct: 466 GLALHGNAQDA 476
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 246/398 (61%), Gaps = 2/398 (0%)
Query: 44 IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY 103
++D A + L++ A S SG++ A LF+ ++ + WN +I A + + K ++
Sbjct: 159 VKDTIAYNCLIS--AYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIF 216
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
M+ PN+ T VL C+ + L +I L ++ V ++ Y
Sbjct: 217 QRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKC 276
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
+++ R VFD + R + W+ MI+GYAQ+ R+NEAL LF+ M +PN VTL SVL
Sbjct: 277 GAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVL 336
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQ G +E GE++ +V+ RG + +AL+ MY+K G + KA+ +FD +P+R+
Sbjct: 337 SACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNV 396
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
TWN+MI GLA +G AE+A+ L+ ++++ ++ PN+ITFVG+++AC HAG +++G + F SM
Sbjct: 397 TWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSM 456
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ + I P IEH+ C+VDL R G++++A E I RM +P+VV+WG LL+A + H N+E+
Sbjct: 457 RSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVEL 516
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
AE K+++ LEP+N G YV+LSN+YA A + L++
Sbjct: 517 AELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKV 554
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 220/425 (51%), Gaps = 43/425 (10%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
++QLKQI A +II RLL ++ + YA ++F+ I P+ + + I
Sbjct: 15 INQLKQIQALIIIKYLSLTPLFIRRLL------NASFIQYARQVFDQIPHPDQGVHCSFI 68
Query: 88 RAQAS-SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
A + SLN ++A+ +++M + T + K+C+++ +++ KQ+H+ V + G
Sbjct: 69 TAYSRLSLN-NEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGF 127
Query: 147 DLDLHVVNCLVRCYSVSSDLNNA-------------------------------RQVFDE 175
+ N L+ Y+ +DL +A R++FD+
Sbjct: 128 HSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDK 187
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+R+R++ W MIS YAQ+ ++ ++F +M E EPN +TLA+VLS CA+ G LE+G
Sbjct: 188 MRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMG 247
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
++ + I+ TA++ MY K GA+ + +FD M R++ TW+AMI+G A +
Sbjct: 248 LRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQN 307
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G + EAL+LF ++ QI PND+T V VLSAC G ++ G +I GS G+ +
Sbjct: 308 GRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERI-GSYVESRGLISNVYV 366
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IA 413
++ + +CG +++A ++ ++ + D V W +++ +G E A + + I
Sbjct: 367 ASALLGMYSKCGNIIKARQIFDKLPQR-DNVTWNSMIMGLAINGFAEDAIALYNRMKEIE 425
Query: 414 LEPNN 418
++PNN
Sbjct: 426 VKPNN 430
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 35/297 (11%)
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+S + ARQVFD+I + V + I+ Y++ NEAL F M T+ +
Sbjct: 43 ASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPI 102
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK-----------NGALAK-- 269
+CA +++G++VH V GF AL++ Y K +G L K
Sbjct: 103 FKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDT 162
Query: 270 ------------------AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
A+ LFD M +R+I +WNAMIS A +G + +F++++ E
Sbjct: 163 IAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDE 222
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
PN+IT VLS C G +++G +I + + + M+++ +CG V +
Sbjct: 223 MCEPNEITLATVLSICAKLGDLEMGLRI-KKLNDNKNLGSNMIVSTAMLEMYVKCGAVDD 281
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+ M + DVV W A++A +G A + + + + ++PN+ + VLS
Sbjct: 282 GRLVFDHMA-RRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLS 337
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 234/409 (57%), Gaps = 31/409 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L S G+LS A +FN + + WN++I +AI +Y M PN+ T
Sbjct: 203 LLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITM 262
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
++ +CS V+ LN K+ H ++ + GL+ + + N L+ Y +L AR +FD +
Sbjct: 263 IGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQ 322
Query: 179 RTLNVWTTMISGYA-------------------------------QSFRANEALMLFDQM 207
+TL WTTM+ GYA Q+ + EAL LF +M
Sbjct: 323 KTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM 382
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+ EP+ VT+ + LSAC+Q G L++G +H +++ + LGTALV MY K G +
Sbjct: 383 QIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNI 442
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+A +F+ +P+RN TW A+I GLA HG+A++AL F K+ IVP++ITF+GVLSAC
Sbjct: 443 ARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSAC 502
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
CH G ++ GR+ F M + + PK++HY CMVDLLGR G + EAEEL+K M D +
Sbjct: 503 CHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAV 562
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
GAL AC+ +GN+++ ER +++ ++P + G YV+L++MY+EA+ K
Sbjct: 563 LGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 219/431 (50%), Gaps = 39/431 (9%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S +R+ PL LS+L ++CKS+ QLKQI AQM+ + I++ FAASRL+AFCALS S +L
Sbjct: 53 SFVRENPL----LSIL-ERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKEL 107
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKA 124
Y TR+ I+ N F WN IR S + + LY M G P+ HT+ +LK
Sbjct: 108 DYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKG 167
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C S + HV K G + D+ V N + +L+ A VF++ R R L W
Sbjct: 168 CCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTW 227
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+MI+G + A EA+ ++ +M E PN +T+ ++S+C+Q L LG++ H ++K
Sbjct: 228 NSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKE 287
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSM--------------------------- 277
G E L AL+ MY K G L A+ LFD+M
Sbjct: 288 HGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREI 347
Query: 278 ----PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
PE+++ WNA+ISG +EAL LF +++ I P+ +T V LSAC G +
Sbjct: 348 LYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGAL 407
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
DVG I ++R + + + +VD+ +CG + A ++ + + + + + W A++
Sbjct: 408 DVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQR-NCLTWTAVIC 465
Query: 394 ACKNHGNIEVA 404
HGN + A
Sbjct: 466 GLALHGNAQDA 476
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 218/370 (58%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F+S++ N W +I A KA L+ M+ GF P + TF+ +L
Sbjct: 636 GSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSIL 695
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC + L+ K++ H+ SG +LD V N L+ YS S + +AR+VFD++ NR +
Sbjct: 696 KACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIM 755
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W MI+GYAQ+ AL QM +G N + S+L+AC+ LE G++VH +
Sbjct: 756 SWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEI 815
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
R + +G AL+ MY K G+L +A+ +FD+ E+N+ TWNAMI+ A HG A +AL
Sbjct: 816 VKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKAL 875
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
D F ++KE I P+ TF +LSAC H+G + G +IF S++ +G+ P IEHYGC+V L
Sbjct: 876 DFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGL 935
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G+ EAE LI +M + PD +W LL AC+ HGN+ +AE + L N VY
Sbjct: 936 LGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVY 995
Query: 423 VVLSNMYAEA 432
V+LSN+YA A
Sbjct: 996 VLLSNVYAAA 1005
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 186/337 (55%), Gaps = 2/337 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A +F ++ + WN++I A + + A L++ M++ G P++ TF VL
Sbjct: 535 GSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVL 594
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
C N +L +QIH + +SGL LD+++ N L+ Y L +A +VF +R+R +
Sbjct: 595 VGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVM 654
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT MI G+A +A LF QM +GF+P T +S+L AC S CL+ G+KV +
Sbjct: 655 SWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHI 714
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G+E+ +G AL+ Y+K+G++ A+ +FD MP R+I +WN MI+G A +G AL
Sbjct: 715 LNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTAL 774
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+++++ +V N +FV +L+AC ++ G+++ + + ++ + ++ +
Sbjct: 775 QFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVK-RKMQGDVRVGAALISM 833
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+CG + EA+E+ K +VV W A++ A HG
Sbjct: 834 YAKCGSLEEAQEVFDNFTEK-NVVTWNAMINAYAQHG 869
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 173/337 (51%), Gaps = 2/337 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GDL A LFN++ + WN +I A + +A+ LY M+ G P + TF +L
Sbjct: 434 GDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLL 493
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+N + + K IH + +SG+ + H+ N L+ Y + A+ VF+ R R +
Sbjct: 494 SACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDII 553
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +MI+G+AQ A LF +M EG EP+ +T ASVL C LELG ++H+ +
Sbjct: 554 SWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLI 613
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G ++ LG AL++MY + G+L A +F S+ RN+ +W AMI G A G +A
Sbjct: 614 IESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAF 673
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+LF +++ + P TF +L AC + +D G+++ + G E ++
Sbjct: 674 ELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS-GYELDTGVGNALISA 732
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ G + +A ++ +M + D++ W ++A +G
Sbjct: 733 YSKSGSMTDARKVFDKMPNR-DIMSWNKMIAGYAQNG 768
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 207/394 (52%), Gaps = 12/394 (3%)
Query: 11 PPLPIPPLSLL-ADKCKSM-HQLKQIHAQMI---ISSRIQDHFAASRLLAFCALSSSGDL 65
PP + ++LL A SM + K+IH + ++S I+ A + + C GD+
Sbjct: 281 PPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRC-----GDV 335
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+ A + + + ++N LI A A + ++A Y MR G N+ T+ VL AC
Sbjct: 336 AGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNAC 395
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S ++L + IH+H+S+ G D+ + N L+ Y+ DL AR++F+ + R L W
Sbjct: 396 STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+I+GYA+ EA+ L+ QM EG +P VT +LSAC S G+ +H +
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS 515
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G + L AL++MY + G++ +A+ +F+ R+I +WN+MI+G A HG E A LF
Sbjct: 516 GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLF 575
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
+++KE + P+ ITF VL C + +++GRQI + G++ + ++++ R
Sbjct: 576 LEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES-GLQLDVNLGNALINMYIR 634
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
CG + +A E+ + + +V+ W A++ + G
Sbjct: 635 CGSLQDAYEVFHSLRHR-NVMSWTAMIGGFADQG 667
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 195/386 (50%), Gaps = 4/386 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+ + K+IHAQM+ + D F ++ L+ S +S A ++F + + WN+
Sbjct: 96 RSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRS--VSDAHQVFLKMPRRDVISWNS 153
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
LI A KA L+ M+ GF P++ T+ +L AC + L K+IH+ + ++G
Sbjct: 154 LISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAG 213
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D V N L+ Y DL +ARQVF I R + + TM+ YAQ E + LF
Sbjct: 214 YQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFG 273
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM EG P+ VT ++L A L+ G+++H G +GTAL M+ + G
Sbjct: 274 QMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCG 333
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+A AK ++ +R++ +NA+I+ LA HGH EEA + + ++ + +V N T++ VL+
Sbjct: 334 DVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLN 393
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC + + G I + V G ++ ++ + RCG + A EL M K D+
Sbjct: 394 ACSTSKALGAGELIHSHISEV-GHSSDVQIGNSLISMYARCGDLPRARELFNTMP-KRDL 451
Query: 386 VMWGALLAACKNHGNIEVAERVVKEI 411
+ W A++A + A ++ K++
Sbjct: 452 ISWNAIIAGYARREDRGEAMKLYKQM 477
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 218/439 (49%), Gaps = 9/439 (2%)
Query: 12 PLPIPPLSLLADKCK--SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P I +S+L C + K+IH+++I + +D + LL DL A
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNM--YGKCEDLPSAR 238
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
++F+ I + +NT++ A ++ I L+ M G P++ T+ +L A +
Sbjct: 239 QVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPS 298
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
L+ K+IH GL+ D+ V L + D+ A+Q + +R + V+ +I+
Sbjct: 299 MLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIA 358
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
AQ EA + QM +G N T SVL+AC+ S L GE +H + G
Sbjct: 359 ALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSS 418
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+G +L+ MY + G L +A+ LF++MP+R++ +WNA+I+G A EA+ L+++++
Sbjct: 419 DVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQ 478
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E + P +TF+ +LSAC ++ G+ I + R GI+ ++++ RCG +
Sbjct: 479 SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSI 537
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLSN 427
+EA+ + + + D++ W +++A HG+ E A ++ E+ LEP+ VL
Sbjct: 538 MEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVG 596
Query: 428 MY-AEAESMKMQLEILLVQ 445
EA + Q+ +L+++
Sbjct: 597 CKNPEALELGRQIHMLIIE 615
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 155/291 (53%), Gaps = 2/291 (0%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
N+ + +++ C+ RSL K+IH + ++G+ D+ + N L+ Y +++A QVF
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
++ R + W ++IS YAQ +A LF++M GF P+ +T S+L+AC LE
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G+K+H + G++ + +L++MY K L A+ +F + R++ ++N M+ A
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYA 260
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+ EE + LF ++ E I P+ +T++ +L A +D G++I + G+ I
Sbjct: 261 QKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIH-KLAVNEGLNSDI 319
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + RCG V A++ ++ + DVV++ AL+AA HG+ E A
Sbjct: 320 RVGTALATMFVRCGDVAGAKQALEAFADR-DVVVYNALIAALAQHGHYEEA 369
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 95/182 (52%), Gaps = 4/182 (2%)
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
E N ++ C + L +++H + G L L++MY K +++ A
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F MP R++ +WN++IS A G ++A LF +++ +P+ IT++ +L+ACC
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198
Query: 333 IDVGRQIFGSMKRV-YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G++I + Y +P++++ ++++ G+C + A ++ +++ DVV + +
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVFS-GIYRRDVVSYNTM 255
Query: 392 LA 393
L
Sbjct: 256 LG 257
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 243/423 (57%), Gaps = 34/423 (8%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D F + + F A+ SS ++ A +LF+ + WNTLI P +A+ ++
Sbjct: 154 DVFVVNAAMHFLAVCSS--MAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWR 211
Query: 106 MRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M G P++ T V+ + +R L +++H +V G+ + ++N ++ Y
Sbjct: 212 MVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCG 271
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF-- 212
DL A+ VF+ I +T+ WTTMI GYAQ ++A +FD+M LM G+
Sbjct: 272 DLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQ 331
Query: 213 -------------------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
EP+ +T+ ++LSAC+Q G LE+G VH ++ R + +L
Sbjct: 332 CKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVML 391
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT LV MY+K G + KA +F +PE+N TW AMISGLA+HGHA+ A+ F+++ + +
Sbjct: 392 GTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGL 451
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
P++ITF+GVLSACCHAG + G++ F M Y +E K++HY CMVDLLGR G + EAE
Sbjct: 452 QPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAE 511
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
L+ M +PD V+WGAL AC+ HGNI + E+ +++ L+P + G+YV+L+NMYAEA
Sbjct: 512 HLVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEAN 571
Query: 434 SMK 436
K
Sbjct: 572 MRK 574
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 223/468 (47%), Gaps = 59/468 (12%)
Query: 11 PPLPIPPLSLLADK-CKSMHQLKQIHAQMIISSRIQDHFA---ASRLLAFCALSSSGDLS 66
PP P L++L+ + S +L Q+HA ++ + + ASRL+ AL+ S D
Sbjct: 3 PPSLCPLLAILSTRHPPSAGRLLQLHAHLLTAGLMSSRSPFPLASRLVE--ALAHSDDPR 60
Query: 67 YATRLFNSIQSPNHFM---------WNTLIRAQASSLNPDKAIF-----LYMNMRRTGFA 112
++ R + + +N +RA SL D+ + LY ++ R+
Sbjct: 61 HSPRPLLHALALLASLPTPPDSASPYNAALRAL--SLCTDRGLVTRCLPLYCSLLRSA-R 117
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P+ TF F+LKAC+ ++ N + +V G D+ VVN + +V S + AR++
Sbjct: 118 PDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKL 177
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGC 231
FD R L W T+I GY + EAL +F +M+ +G P+ VT+ V+S AQ
Sbjct: 178 FDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRD 237
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA------------------- 272
LELG ++H +V+ G L ++ MY K G L +AK+
Sbjct: 238 LELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVG 297
Query: 273 ------------LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
+FD MPER++ WNA+++G +EAL LF +++ + P+DIT
Sbjct: 298 YAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITM 357
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V +LSAC G +++G + + R + + +VD+ +CG + +A + K +
Sbjct: 358 VNLLSACSQLGALEMGMWVHHYIDR-RRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIP 416
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
K + + W A+++ NHG+ +VA + + +I L+P+ VLS
Sbjct: 417 EK-NALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLS 463
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/411 (37%), Positives = 239/411 (58%), Gaps = 2/411 (0%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L C S+ +L++IHA +I+S A++LL FCA+S SG L+YA LF+ ++ P
Sbjct: 10 LLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQMECPQT 69
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHT 139
WN++IR A S +P AI Y M F+ P+ TF+FVLKAC +++ CK++H
Sbjct: 70 EAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERKCKEVHG 129
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
V + G D D+ V LV+CYS + ARQVFD++ R L W MIS ++Q E
Sbjct: 130 SVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQE 189
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL ++QM E + + TL ++S+CA G L +G ++H F + G + +G AL+
Sbjct: 190 ALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLYVGNALID 249
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G+L +A +FD M ++I TWN+MI G HG EA+ F+++ + +I PN +T
Sbjct: 250 MYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARIQPNPVT 309
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+G+L C H G + G + F M + ++P+++HYGC+VDL GR GK+ +A E++
Sbjct: 310 FLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNS 369
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
D V+W LL +CK H N+ + E + + L + G ++L+ +YA
Sbjct: 370 S-HNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYA 419
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 162/310 (52%), Gaps = 10/310 (3%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR--CYSVSSDLNNAR 170
N+ +L+ C++++ L ++IH HV SGL + + N L+ SVS L A+
Sbjct: 2 SNEKAILALLQGCNSLKRL---RKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQ 58
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE-PNSVTLASVLSACAQS 229
+F ++ W ++I G+AQS +A++ ++QM+ + F P++ T + VL AC +
Sbjct: 59 LLFHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERI 118
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
++VH V G++ I+ T LV Y+ G + A+ +FD MP R++ WNAMI
Sbjct: 119 KAERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMI 178
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
S + G +EAL + ++ E + + T VG++S+C H G +++G Q+ R G+
Sbjct: 179 SCFSQQGLHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMH-RFARENGL 237
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ + ++D+ +CG + +A + RM + D+ W +++ HG A +
Sbjct: 238 DQSLYVGNALIDMYAKCGSLDQAILIFDRM-QRKDIFTWNSMIVGYGVHGRGSEAIYCFQ 296
Query: 410 EIIA--LEPN 417
+++ ++PN
Sbjct: 297 QMLEARIQPN 306
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 268/523 (51%), Gaps = 103/523 (19%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + +K++HAQ+I + D + A +L++ A S ++ A +FN IQ PN ++
Sbjct: 32 KCTDFNHIKEVHAQIIKRNLHNDLYVAPKLIS--AFSLCHQMNLAVNVFNQIQDPNVHLY 89
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NTLIRA + KA + +M++ G + T+ F+LKAC+ L + IH HV K
Sbjct: 90 NTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEK 149
Query: 144 SGLDLDLHVVNCLVRCYS---------------------------------VSSDLNNAR 170
G DL V N L+ YS + DL AR
Sbjct: 150 YGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRAR 209
Query: 171 QVFDEIRNRTL-----------------------------NV--WTTMISGYAQSFRANE 199
++FDE+ R NV W+TM+SGY ++
Sbjct: 210 KLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEM 269
Query: 200 ALMLFDQM----------LMEGF---------------------EPNSVTLASVLSACAQ 228
A MLFD+M ++ GF +P+ TL S+L+ACA+
Sbjct: 270 ARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAE 329
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
SG L LG+KVH +K + + ALV MY K G + KA ++F+ M R++ +WN M
Sbjct: 330 SGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCM 389
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
+ GLA HGH E+A+ LF K+++E P+ +T + +L AC HAGF+D G F SM+R +G
Sbjct: 390 LQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHG 449
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
I P IEHYGCM+DLLGR G++ EA L++ M +P+ V+WG LL AC+ H + +AE+V+
Sbjct: 450 IVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVL 509
Query: 409 KEIIALEPNNHGVYVVLSNMYAEA------ESMKMQLEILLVQ 445
+I LE ++ G Y +LSN++A A +M++Q++ VQ
Sbjct: 510 DRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQ 552
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 249/444 (56%), Gaps = 42/444 (9%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M +LK+ HA +I + Q +F ++++ C + D+ YA+ LF + PN +++N +I
Sbjct: 1 MAELKKNHALVIKYALSQSNFLVTKMIDVC--DRNEDMDYASFLFKEVIDPNAYLYNAMI 58
Query: 88 RAQASSLNPDKAIFLYMNMRRTG---------FAPNQHTFTFVLKACSNVRSLNCCKQIH 138
RA + I Y M R P++ TF FV+KAC+ + N KQ+H
Sbjct: 59 RACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVH 118
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDL-------------------------------N 167
K G L N L+ Y+ +L
Sbjct: 119 AQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMR 178
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
AR +FDE+ NRT+ WT +ISGY + +AL +F +M + G EP+ ++ SVL ACA
Sbjct: 179 RARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACA 238
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
+ G LE G+ +H+F G + AL+ MYTK G + +A LFD M R++ +W+
Sbjct: 239 KLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWST 298
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
MI GLA+HG EA+ +F ++++ I PN ITFVG+LSAC HAGF + G F +MK+ +
Sbjct: 299 MIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDF 358
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
IEP+IEHYG +VDLLGR G++ +A +++++M KPD +WG+LL++C+ H NIEVA
Sbjct: 359 HIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIA 418
Query: 408 VKEIIALEPNNHGVYVVLSNMYAE 431
++ + LEP++ G YV+LSN+YA+
Sbjct: 419 MEHLEELEPDDTGNYVLLSNIYAD 442
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 252/450 (56%), Gaps = 43/450 (9%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
PP + C SM ++KQ H+ ++ ++ A SR+ FC+LS GD++YA +LF ++
Sbjct: 8 PPWA-----CSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTL 62
Query: 76 QSPNHFMWNTLIRAQAS-SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+P+ F++NTL +A S S P ++ Y +M + PN TF +++AC
Sbjct: 63 PNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEEE---A 119
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ- 193
KQ+H HV K G D + +N L+ Y L++AR+VF + + + WT+++SGY+Q
Sbjct: 120 KQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQW 179
Query: 194 -----SFRA--------------------------NEALMLFDQMLMEG-FEPNSVTLAS 221
+FR EA LF +M +E E + A+
Sbjct: 180 GLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAAT 239
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
+LSAC G LE G +H +V+ G + + L T ++ MY K G L KA +F + +
Sbjct: 240 MLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKR 299
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIF 340
+++WN MI G A HG E+A+ LF+++E+E +V P+ ITFV VL+AC H+G ++ G F
Sbjct: 300 VSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYF 359
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
M V+GI+P EHYGCMVDLL R G++ EA+++I M PD + GALL AC+ HGN
Sbjct: 360 RYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGN 419
Query: 401 IEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+E+ E V +I L+P N G YV+L NMYA
Sbjct: 420 LELGEEVGNRVIELDPENSGRYVILGNMYA 449
>gi|297797141|ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
gi|297312290|gb|EFH42714.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
Length = 1401
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 255/466 (54%), Gaps = 54/466 (11%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRI-----QDHFAASRLLAFCALSSSGD-----LSYA 68
S L C+++ L Q HAQ I S RI Q+ A+ L A ++S S +SYA
Sbjct: 422 SYLLKLCRTLKHLHQFHAQFITSGRISSSLNQNSVFANVLFAITSISPSASTSNVVVSYA 481
Query: 69 TRLFNSIQSPNHFMWNTLIRA----QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
T + I +P+ F +NT+IR + SL+ + ++ MRR P+ HT+ FV KA
Sbjct: 482 TSVLRFITNPSTFCFNTIIRIYTLHEPLSLSSQR---FFVEMRRRSVPPDFHTYPFVFKA 538
Query: 125 CSNVRS--LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR--- 179
C+ ++ L+ K +H + GL DL +N L+R YS+ + + +A Q+FDE R
Sbjct: 539 CAAKKNGDLSLVKTLHCQALRFGLLSDLFTLNTLIRAYSLMAPIGSALQLFDENPQRDVV 598
Query: 180 TLNV----------------------------WTTMISGYAQSFRANEALMLFDQMLMEG 211
T NV W ++I+GYAQ + EA+ LFD+M+ G
Sbjct: 599 TYNVLIDGLVKACEIVRARELFDSMPFRDLVSWNSLIAGYAQMNQCREAISLFDEMIGLG 658
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P++V + S LSACAQSG LE G+ +H + K + + + L T LV Y K G + A
Sbjct: 659 LKPDNVAIVSTLSACAQSGDLEKGKAIHDYTKKKRLFIDSFLATGLVDFYAKCGFIDTAM 718
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F ++ + TWNAMI+GLA HG+ E +D F K+ I P+ ++F+ VL C H+G
Sbjct: 719 EIFHLSSDKTLFTWNAMITGLAMHGNGELTVDYFHKMVSSGIKPDGVSFISVLVGCSHSG 778
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV----WKPDVVM 387
+ R++F M+ +Y ++ +++HYGCM DLLGR G + EA E+I++M + ++
Sbjct: 779 LVGEARKLFDQMRSLYDVDREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGKREKLLA 838
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
W LL C+ HGNIEVAE+ K + AL P + GVY V+ MYA AE
Sbjct: 839 WSGLLGGCRIHGNIEVAEKAAKRVKALSPEDGGVYKVMVEMYANAE 884
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/459 (36%), Positives = 260/459 (56%), Gaps = 40/459 (8%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSR-IQDHFAASRLLAFCALSSSGD 64
+S R PP P L++ D S+ ++ QIHA ++ + I + L A +S G
Sbjct: 20 ASFRNPP-P-EKLAVFIDNSHSVDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAYASHGK 77
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
+ ++ LF+ P+ F++ I + + D+A LY+ + + PN+ TF+ +LK+
Sbjct: 78 IRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKS 137
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL--- 181
CS K IHTHV K GL LD +V LV Y+ D+ +A++VFD + R+L
Sbjct: 138 CST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSS 193
Query: 182 -----------NV-----------------WTTMISGYAQSFRANEALMLFDQMLMEGF- 212
NV W MI GY+Q ++ALMLF ++L +G
Sbjct: 194 TAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKP 253
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ +T+ + LSAC+Q G LE G +HVFV + + TAL+ MY+K G+L +A
Sbjct: 254 KPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVL 313
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFVGVLSACCHAG 331
+F+ P ++I WNAMI+G A HG++++AL LF +++ + P DITF+G L AC HAG
Sbjct: 314 VFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAG 373
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G QIF SM + YGI+PKIEHYGC+V LLGR G++ A E+IK M + D V+W ++
Sbjct: 374 LVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSV 433
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L +CK HG + + + + +I +N G+YV+LSN+YA
Sbjct: 434 LGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYA 472
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 231/397 (58%), Gaps = 33/397 (8%)
Query: 69 TRLFNS-IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
T LFN + N F WN++I A S + +A+ + +MR+ PN+ TF +K+CS
Sbjct: 29 TTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSA 88
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ L+ +Q H G + DL V + LV YS +L +AR +FDEI +R + WT+M
Sbjct: 89 LLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 148
Query: 188 ISGYAQSFRANEALMLFDQML-----------------------MEGFEP---------N 215
I+GY Q+ A+ AL +FD M ME F N
Sbjct: 149 ITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYN 208
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
+VTL++VL ACA SG LG+ +H V G E +GT+++ MY K G + A+ FD
Sbjct: 209 AVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 268
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
M E+N+ +W+AM++G HGHA+EAL++F ++ + PN ITFV VL+AC HAG ++
Sbjct: 269 RMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEE 328
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
G F +M + +EP +EHYGCMVDLLGR G + EA +LIK M +PD V+WGALL AC
Sbjct: 329 GWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 388
Query: 396 KNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ H N+++ E +++ L+P N G YV+LSN+YA+A
Sbjct: 389 RMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADA 425
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 39/286 (13%)
Query: 168 NARQVFDEIRNRTLNV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
N +F++ ++T NV W ++I+ A+S + EAL F M +PN T + +
Sbjct: 27 NLTTLFNKYVDKT-NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKS 85
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C+ L G + H + GFE + +ALV MY+K G L A+ LFD + RNI +W
Sbjct: 86 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSW 145
Query: 286 NAMISG-------------------------------LASHGHAEEALDLFRKLEKE-QI 313
+MI+G A +G + E++++F ++ K+ +I
Sbjct: 146 TSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 205
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
N +T VL AC H+G +G+ I + ++ G+E + ++D+ +CGKV A
Sbjct: 206 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM-GLESNVFVGTSIIDMYCKCGKVEMAR 264
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE--IIALEPN 417
+ RM K +V W A++A HG+ + A V E + ++PN
Sbjct: 265 KAFDRMREK-NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 309
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/408 (38%), Positives = 236/408 (57%), Gaps = 13/408 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K++H ++ D F S LL F + G++ A ++F+ + + WN LI A
Sbjct: 125 KEVHGVIVRIGYELDGFLQSSLLNFYMVC--GEIGNAQQVFDEFDAKDVVFWNALITGYA 182
Query: 92 SSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK-----SG 145
+ ++ M PN+ T ++ AC ++L + IH ++ K G
Sbjct: 183 RQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREG 242
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ L+ ++N V+C L+ AR++FDEI + VW ++I GY Q NE + L
Sbjct: 243 VKLEAALINLYVKC----GYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLR 298
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M + +P+ T++ VLSACAQ G LG VH F + +G +GTAL+ MY K G
Sbjct: 299 EMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCG 357
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ A+ +FD M ERN+ATWNA++SG ASHG AE A++LF ++ + P+ ITF+ VL
Sbjct: 358 FIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLH 417
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H+G ++ G+Q F M + Y I P++EHYGCMVDLLGR G + EA ELIK MV +P+V
Sbjct: 418 ACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNV 477
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
V+WGALL+AC HGNIE+ E +I L + G YV+L+N+YA A+
Sbjct: 478 VVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQ 525
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 219/402 (54%), Gaps = 14/402 (3%)
Query: 17 PLSLLA--DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
P S+LA + C ++ QLKQIHA+ IISS F ++++ + S L YAT++FN
Sbjct: 6 PKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIIN--SFLSHACLDYATQVFNQ 63
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHTFTFVLKACSNVRSLNC 133
Q P+ F++N +IRA +SS P AI +Y MR +++T+ FV KAC++ ++
Sbjct: 64 TQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEK 123
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
K++H + + G +LD + + L+ Y V ++ NA+QVFDE + + W +I+GYA+
Sbjct: 124 GKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYAR 183
Query: 194 SFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEKVHVF-VKMRGFEMGA 251
++ +F +M+ ++ PN T+ ++ AC +S L+LG +H + +K G
Sbjct: 184 QGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGV 243
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
L AL+++Y K G L A+ LFD +PE+N WN++I G G E ++L R++
Sbjct: 244 KLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLS 303
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ P+ T GVLSAC G ++G + F K ++ + ++D+ +CG +
Sbjct: 304 NLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWDVFIGT----ALIDMYAKCGFI 359
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
A ++ +M + +V W A+L+ +HG E A + E+
Sbjct: 360 GAARKVFDQMN-ERNVATWNAILSGYASHGQAESAIELFSEM 400
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-I 313
T +++ + + L A +F+ E + +NAMI +S A+ ++ K+ Q I
Sbjct: 42 TKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNI 101
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
+ + T+ V AC ++ G+++ G + R+ G E +++ CG++ A+
Sbjct: 102 LGDKYTYPFVFKACASQFAVEKGKEVHGVIVRI-GYELDGFLQSSLLNFYMVCGEIGNAQ 160
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP--NNHGVYVVLSNMYAE 431
++ K DVV W AL+ G + + V KE++ ++ N G + L E
Sbjct: 161 QVFDEFDAK-DVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIE 219
Query: 432 AESMKM 437
++++K+
Sbjct: 220 SKNLKL 225
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 251/440 (57%), Gaps = 38/440 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M +LK+IHA ++ S F ++++ C + G+ YA LF + PN F++N +I
Sbjct: 1 MVELKKIHAHVVKFSLSXSSFLVTKMVDMC--NHHGETEYANLLFKRVADPNAFLYNAMI 58
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFA-----PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
RA + AI ++ M P++ TF FV+K C+ + N KQ+H H
Sbjct: 59 RAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAF 118
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNA-------------------------------RQ 171
K G + + N LV Y L++A R
Sbjct: 119 KFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARA 178
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
+F+E++++T+ WT ++SGYA+ AL F +M M E + ++L SVL ACAQ G
Sbjct: 179 IFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGA 238
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LELG+ +H++ GF + AL+ +Y K G++ + + LF M ER++ +W+ MI G
Sbjct: 239 LELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVG 298
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
LA+HG A EA++LF++++K ++ PN ITFVG+LSAC HAG ++ G F SM+R IEP
Sbjct: 299 LANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIEP 358
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+EHYGC+V+LLG G++ +A ELIK+M KPD +WG L ++C++HGN+E+ ++ +
Sbjct: 359 GVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAMEHL 418
Query: 412 IALEPNNHGVYVVLSNMYAE 431
+ LEP++ G Y+ LSN+YA+
Sbjct: 419 LELEPDDTGNYITLSNLYAD 438
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 243/406 (59%), Gaps = 5/406 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+ + ++H +I SS+ D + LL C ++ LSYA +F+ I SP+ +NT+I
Sbjct: 1 MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTII 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R+ S P ++F + +MR G + TF FVLKACS L +H+ + K GLD
Sbjct: 61 RSH-SRFFPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLD 116
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D+ V N L+ Y L A +VFDE+ R W+T+I+ + + A+EAL LF++M
Sbjct: 117 SDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKM 176
Query: 208 LMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+E P+ VT+ SV+SA + G LELG V F+ G + LGTAL+ M+++ G+
Sbjct: 177 QLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGS 236
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ ++ +F+ M RN+ TW A+I+GL HG + EAL +F + K + P+ +TF GVL A
Sbjct: 237 IDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVA 296
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G + G IF S+++VY ++P ++HYGCMVD+LGR G + EA + ++RM KP+ +
Sbjct: 297 CSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSI 356
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+W LL AC NH N+ +AE+V +I + + +G V+LSN+Y A
Sbjct: 357 IWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAA 402
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 255/436 (58%), Gaps = 15/436 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATRLF---- 72
L+LL C ++ +L QIHA I+ + +Q++ L F + SS+ + YAT
Sbjct: 21 LTLLNSHCNTLSKLTQIHA-FILKTGLQNN--PLILTKFTSTSSNLNSIHYATSFLFPPS 77
Query: 73 --NSIQSPNH--FMWNTLIRAQASSLNPDKAIFL-YMNMRRTGFAPNQHTFTFVLKACSN 127
S +P++ F++NTLIRA + + + FL Y M R G PN+ TF FVLK C+
Sbjct: 78 HTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAG 137
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD--LNNARQVFDEIRNRTLNVWT 185
+ SL K +H V K G + D+HV+N L+ Y + A +VFD+ W+
Sbjct: 138 IGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWS 197
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
MI+G+ + ++ A+ LF +M + G P+ +T+ SVLSACA G LELG+ V +V+ +
Sbjct: 198 AMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKK 257
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
L AL+ M+ K G + KA LF M R I +W ++I+GLA HG +A+ LF
Sbjct: 258 NIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLF 317
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
++ + I P+D+ F+GVLSAC H+G +D GR FGSM+R + I PK+EHYGCMVDLL R
Sbjct: 318 DEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCR 377
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G V EA E +++M ++P+ ++W ++ AC G +++ E + KE+I EP + YV+L
Sbjct: 378 GGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLL 437
Query: 426 SNMYAEAESMKMQLEI 441
SN+YA+ + + ++
Sbjct: 438 SNIYAKLRQWEKKTKV 453
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 249/482 (51%), Gaps = 64/482 (13%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
S L C+S+ LKQ+HA + + D A +LL A+S L YA RLF +P
Sbjct: 9 SSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNP 68
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-NQHTFTFVLKACSNVRSLNCCKQI 137
+ FM NTLIR A S P ++ ++ MRR AP + +F F+LKA ++ RSL Q+
Sbjct: 69 DVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQL 128
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN------------------- 178
H GLD L V LV YS + A++VF+E+
Sbjct: 129 HCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDV 188
Query: 179 ------------RTLNVWTTMISGYAQS---------------------------FRAN- 198
R L W M++GY ++ F N
Sbjct: 189 KGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNG 248
Query: 199 ---EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
EA F ++ G PN V+L LSACA +G +E G+ +H F++ GF +
Sbjct: 249 FFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNN 308
Query: 256 ALVHMYTKNGALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ Y+K G + A+ +F+ MPE R+I +W +MI+GLA HG+ EEA+ LF ++E+ I
Sbjct: 309 ALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIR 368
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+ I F+ +L AC HAG I+ G + F MK +Y IEP IEHYGCMVDL GR G++ +A E
Sbjct: 369 PDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYE 428
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
I M P ++W LL AC HGN+++AERV + + L+PNN G +V+LSN+YA A
Sbjct: 429 FIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGK 488
Query: 435 MK 436
K
Sbjct: 489 WK 490
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/437 (37%), Positives = 248/437 (56%), Gaps = 35/437 (8%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
QL++IHA + Q + S ++ C S ++YA R+F Q+P ++N +I+
Sbjct: 24 QLREIHAHFLRHGLNQLNQILSHFVSICG--SLNKMAYANRIFKQTQNPTIILFNAMIKG 81
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ + +++ L+ +M+ G P+++T +LKACS++ L K +H V G +
Sbjct: 82 YSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGF 141
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY------------------ 191
+ ++ YS + +A +VFDE+ R + VW MI G+
Sbjct: 142 SAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRK 201
Query: 192 -------------AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
AQS R +EAL LF ML GF+P+ T+ +VL CA+ G +++G+ +
Sbjct: 202 RSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWI 261
Query: 239 HVFVKMRGFEMGAI-LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
H + K G + +G ALV Y K+G A+ +FD MP +N+ +WN +ISGLA +G+
Sbjct: 262 HSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNVISWNTLISGLALNGN 321
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E ++L ++ E + PND TFVGVLS C HAG + GR++ SM + IEPK+EHYG
Sbjct: 322 GELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEHYG 381
Query: 358 CMVDLLGRCGKVLEAEELIKRMV-WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
CMVDLLGR G V EA +LI+ M P+ +WG+LL+AC+ HG++E+A VKE+I LEP
Sbjct: 382 CMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDLEP 441
Query: 417 NNHGVYVVLSNMYAEAE 433
N G YV+LSNMYAE E
Sbjct: 442 WNSGNYVLLSNMYAEEE 458
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 243/449 (54%), Gaps = 40/449 (8%)
Query: 20 LLADKCKSMHQLKQIHAQMI----ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
L KC S+ +LKQIH + + + S+ Q H A L + L S D A ++FN I
Sbjct: 8 FLLQKCGSLEKLKQIHGKAVTLGLLCSKRQ-HLACKLLNTYTQLGSPVD---AQKVFNHI 63
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
Q+P+ W LI + P KA ++ ++ +G P+ + AC + + L+ +
Sbjct: 64 QNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGR 123
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVS-------------------------------S 164
+H V + L D V N L+ YS S +
Sbjct: 124 IVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCN 183
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE-PNSVTLASVL 223
D+ AR++FDE+ R WT MI+GY Q L LF +M EG + P +T+ +VL
Sbjct: 184 DIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVL 243
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
S CA G +LG VH +V ++ + AL+ MY K+GAL A +F MP+R++
Sbjct: 244 SGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVF 303
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+W MISGLA HG AL+ F + K +VPN++T + VLSAC HAG + GR +F M
Sbjct: 304 SWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKM 363
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ +GI+PKI+HYGCMVDLLGR G + EA+ELI+ M KPD V+W +LL+AC HGN+ +
Sbjct: 364 VQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLAL 423
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AE K II LEP++ GVY++L N+Y A
Sbjct: 424 AEMAGKMIIELEPDDDGVYILLWNIYCSA 452
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 43/323 (13%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL--DLDLHVVNCLVRCYSVSSDLNNARQ 171
N TF F+L+ C ++ L KQIH GL H+ L+ Y+ +A++
Sbjct: 2 NTQTFYFLLQKCGSLEKL---KQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 58
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VF+ I+N + WT +IS Y + + +A +F + G P+S + +SAC
Sbjct: 59 VFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKD 118
Query: 232 LELGEKVHVFVKMRGFEMGA--ILGTALVHMYTKNGA----------------------- 266
L G VH V FE+G+ I+G AL+ MY+++GA
Sbjct: 119 LSNGRIVHGMVFR--FELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLL 176
Query: 267 --------LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPND 317
+ A+ +FD MP RN +W AMI+G L+LF+++ E + P
Sbjct: 177 NGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTV 236
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
IT V VLS C G D+G + G + + ++ + ++D+ + G ++ A ++ +
Sbjct: 237 ITIVAVLSGCADIGAFDLGSSVHGYVNKT-NLDLDVTVNNALMDMYAKSGALVLALKIFQ 295
Query: 378 RMVWKPDVVMWGALLAACKNHGN 400
M K DV W +++ HG
Sbjct: 296 EMP-KRDVFSWTTMISGLALHGK 317
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 240/401 (59%), Gaps = 3/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H Q++ D + + LL A + GDL A LF + N +W ++I
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYA--ACGDLKSARFLFERMGHRNKVVWTSMISGYM 156
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ P++A+ LY M GF+P++ T ++ AC+ ++ L ++H+H+ + + +
Sbjct: 157 KNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM-E 210
+ + LV Y+ DL ARQVFD++ ++ + W+ +I GY ++ R+ EAL LF ++
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
PN VT+ +V+SACAQ G LE G VH ++ L +L+ M++K G + A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
K +FDSM +++ +WN+M++G A HG EAL FR ++ + P++ITF+GVL+AC HA
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHA 396
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + G+++F ++ +YG+ K EHYGCMVDLL R G + EA E I+ M +PD +WG+
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+L AC+ + N+E+ E + ++ LEP N GVY++LSN+YA+
Sbjct: 457 MLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAK 497
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 203/364 (55%), Gaps = 4/364 (1%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M+++ I + ++L+A S + YA +F + + WN+++RA +S P
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60
Query: 98 KAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ Y M R+ P++ TF +LK C+ + K +H V K L DL++ L
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ Y+ DL +AR +F+ + +R VWT+MISGY ++ NEAL+L+ +M +GF P+
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
VT+A+++SACA+ L +G K+H ++ ++ A+LG+ALV+MY K G L A+ +FD
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDV 335
+ ++++ W+A+I G + + EAL LFR++ + PN++T + V+SAC G ++
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
GR + + R + ++D+ +CG + A+ + M +K D++ W +++
Sbjct: 301 GRWVHDYITRTQKGHS-VSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGF 358
Query: 396 KNHG 399
HG
Sbjct: 359 ALHG 362
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 211/362 (58%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
+N L+ S+ +A+ L+ M G N T ++ AC + +L +H
Sbjct: 120 YNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL 179
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G D D+ VVNC + Y +N A+++FDE+ + L W M+SGYAQ+ A L
Sbjct: 180 KYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLE 239
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
L+ M M G P+ VTL VLS+CA G +G +V ++ GF L AL++MY
Sbjct: 240 LYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYA 299
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
+ G L KA+A+FD MPER + +W A+I G HGH E A+ LF+++ + I P+ FV
Sbjct: 300 RCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVC 359
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSAC HAG D G + F MKR Y +EP EHY CMVDLLGR G++ EA+ LI+ M K
Sbjct: 360 VLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIK 419
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
PD +WGALL ACK H N+E+AE + +I LEP N G YV+LSN+Y+ A + K L I
Sbjct: 420 PDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIR 479
Query: 443 LV 444
++
Sbjct: 480 IM 481
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 193/363 (53%), Gaps = 12/363 (3%)
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
++ N++ +P WNT +R A +A+ LY M R G PN TF F LK+C+ +
Sbjct: 7 SKSMNALSTP----WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAAL 62
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE-IRNRTLNV-WTT 186
Q H ++K G + V L+ Y S ++NAR+VF+E +R L V +
Sbjct: 63 SLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNA 122
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
++SGY + + +EA++LF QM EG NSVTL ++ AC LELG +H G
Sbjct: 123 LVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 182
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
F+ + + MY K G++ A+ LFD MP + + +WNAM+SG A +G A L+L+R
Sbjct: 183 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYR 242
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYGCMVDLLGR 365
++ + P+ +T VGVLS+C + G VG ++ F + P + + ++++ R
Sbjct: 243 NMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYAR 300
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYV 423
CG + +A+ + M + +V W A++ HG+ E+A ++ KE+I +EP+
Sbjct: 301 CGNLTKAQAVFDGMPER-TLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVC 359
Query: 424 VLS 426
VLS
Sbjct: 360 VLS 362
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G ++YA +LF+ + WN ++ A + + LY NM G P+ T VL
Sbjct: 201 GSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVL 260
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+C+N+ + + ++ + SG + + N L+ Y+ +L A+ VFD + RTL
Sbjct: 261 SSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLV 320
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVF 241
WT +I GY A+ LF +M+ G EP+ VLSAC+ +G + G E +
Sbjct: 321 SWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMM 380
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASHGHAEE 300
+ E G + +V + + G L +A+ L +SMP + + A W A++ H + E
Sbjct: 381 KRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVEL 440
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLS 325
A F ++ ++ P +I + +LS
Sbjct: 441 AELAFERV--IELEPENIGYYVLLS 463
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 229/370 (61%), Gaps = 3/370 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFV 121
G+ A ++F+ I + WN+L+ A +A+ ++ +R +GF P++ + V
Sbjct: 166 GENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSV 225
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC + L + + V + G+ ++ ++ + L+ YS +L ++R++FD + +R
Sbjct: 226 LGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDF 285
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W IS YAQ+ A+EA+ LF M G +PN VTL +VLSACA G L+LG+++ +
Sbjct: 286 ITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEY 345
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
RG + + TAL+ MY K G+L A+ +F+ MP +N A+WNAMIS LASHG A+EA
Sbjct: 346 ATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEA 405
Query: 302 LDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
L LF ++ E PNDITFV +LSAC HAG +D G ++F M ++G+ PKIEHY CM
Sbjct: 406 LSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCM 465
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R G + EA ++I++M KPD V GAL +AC+ N+++ ERV++ ++ L+P+N
Sbjct: 466 VDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNS 525
Query: 420 GVYVVLSNMY 429
G Y++ S +Y
Sbjct: 526 GNYIISSKIY 535
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 225/412 (54%), Gaps = 15/412 (3%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN 73
PI L L +C S L+QIH Q I S + + S+ ++ D +Y+T +F+
Sbjct: 20 PIFLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISL------KDFTYSTLIFS 73
Query: 74 SIQ-SPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
I PN + +N ++RA ++ + + LY M+ +PN TF FV AC+N+ +
Sbjct: 74 HITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEI 133
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ H V K GLD D H VN +V Y + AR+VFDEI + L W +++SGY
Sbjct: 134 RMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGY 193
Query: 192 AQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
A+ A EA+ +F ++ E GFEP+ ++L SVL AC + G LELG V FV RG ++
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+ +G+AL+ MY+K G L ++ +FD MP R+ TWNA IS A +G A+EA+ LF +++
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKE 313
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
+ PN +T VLSAC G +D+G+Q+ G++ I ++D+ +CG +
Sbjct: 314 NGVDPNKVTLTAVLSACASIGALDLGKQM-DEYATHRGLQHDIFVATALIDMYAKCGSLE 372
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA----ERVVKEIIALEPNN 418
A+ + M K D W A+++A +HG + A ER+ E + PN+
Sbjct: 373 SAQRVFNDMPRKNDAS-WNAMISALASHGKAKEALSLFERMSDEGGSARPND 423
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 231/375 (61%), Gaps = 2/375 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S G + A +LF+ I + WN +I A + N +A+ L+ +M +T P++ T
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ AC+ S+ +Q+H + G +L +VN L+ YS +L A +F+ + +
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W T+I GY EAL+LF +ML G PN VT+ S+L ACA G +++G +H
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 240 VFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
V++ +++G + L T+L+ MY K G + A +F+S+ +++++WNAMI G A HG
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A+ + DLF ++ K I P+DITFVG+LSAC H+G +D+GR IF +M + Y + PK+EHYG
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CM+DLLG G EAEE+I M +PD V+W +LL ACK HGN+E+ E + +I +EP
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 570
Query: 418 NHGVYVVLSNMYAEA 432
N G YV+LSN+YA A
Sbjct: 571 NPGSYVLLSNIYASA 585
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 234/438 (53%), Gaps = 37/438 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNS 74
P LSLL + CK++ L+ IHAQMI ++A S+L+ FC LS + L YA +F +
Sbjct: 35 PSLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
IQ PN +WNT+ R A S +P A+ LY+ M G PN +TF FVLK+C+ ++
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 135 KQIHTHVSKSGLDLDLHV-------------------------------VNCLVRCYSVS 163
+QIH HV K G DLDL+V L++ Y+
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
+ NA+++FDEI + + W MISGYA++ EAL LF M+ P+ T+ +V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQSG +ELG +VH+++ GF + AL+ +Y+K G L A LF+ +P +++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN +I G +EAL LF+++ + PND+T + +L AC H G ID+GR I +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 344 -KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
KR+ G+ ++D+ +CG + A ++ ++ K + W A++ HG +
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWNAMIFGFAMHGRAD 452
Query: 403 VAERVVKEI--IALEPNN 418
+ + + I ++P++
Sbjct: 453 ASFDLFSRMRKIGIQPDD 470
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 251/423 (59%), Gaps = 23/423 (5%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQD---HFAASRLLAFCALSSSGDLSYATRLFNS 74
L L + C + QLKQ+HAQ I ++ F SR+L F SS DL YA R+F+
Sbjct: 29 LLLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHF---SSLHDLRYAFRVFHQ 85
Query: 75 IQSPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLN 132
I++PN FMWN LIRA A S + + AI LY M G ++HTF FVLKAC+ + +L+
Sbjct: 86 IENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALS 145
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+QIH + K G D D+++ N LV Y+ L+ A+ VFD + R+L W +I +
Sbjct: 146 EGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFV 205
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ + AL LF +M + FEP+ T+ S+ +ACA G L LG V +
Sbjct: 206 RFGEFDAALNLFGEM-QKFFEPDGYTIQSIANACAGMGSLSLGIVNDV-----------L 253
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-E 311
L T+LV MY K G+L A LF MP+R++ +WN+MI G ++HG AL+ F + + E
Sbjct: 254 LNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTE 313
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
+++PN ITFVGVLSAC H G + GR+ F M Y I+P++EHYGC+VDLL R G + E
Sbjct: 314 KLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDE 373
Query: 372 AEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPN-NHGVYVVLSNMY 429
A +++ M +PD+V+W +LL A CK + +E++E + + ++ E GVYV+LS +Y
Sbjct: 374 ALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVY 433
Query: 430 AEA 432
A A
Sbjct: 434 ASA 436
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 244/424 (57%), Gaps = 6/424 (1%)
Query: 12 PLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
P I LS+L D C + L K +HAQ + + + D A+ L+ ++ G + A
Sbjct: 257 PNKISFLSIL-DGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRM--YTTCGSIEGA 313
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R+F++++ + W +I A + N + A L+ M+ G P++ T+ ++ AC+
Sbjct: 314 RRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAIS 373
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
+LN ++IH+ V +G DL V LV Y+ + +ARQVFD + R + W+ MI
Sbjct: 374 ANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMI 433
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
Y ++ EA F M EP+ VT ++L+AC G L++G +++
Sbjct: 434 GAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLV 493
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
LG AL+ M K+G++ +A+ +FD+M R++ TWNAMI G + HG+A EAL LF ++
Sbjct: 494 SHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRM 553
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
KE+ PN +TFVGVLSAC AGF+D GR+ F + GI P ++ YGCMVDLLGR G+
Sbjct: 554 LKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGE 613
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EAE LIK M KP +W +LL AC+ HGN++VAER + + ++P + VYV LS+M
Sbjct: 614 LDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHM 673
Query: 429 YAEA 432
YA A
Sbjct: 674 YAAA 677
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 219/422 (51%), Gaps = 14/422 (3%)
Query: 12 PLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
P I LS+L D C S L K++HAQ++ + + D + L++ G + A
Sbjct: 156 PSIITFLSVL-DACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYV--KGGSMDDA 212
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
++F+ + + +N ++ A S + +KA L+ M++ G PN+ +F +L C
Sbjct: 213 RQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTP 272
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
+L K +H +GL D+ V L+R Y+ + AR+VFD ++ R + WT MI
Sbjct: 273 EALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMI 332
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
GYA++ +A LF M EG +P+ +T +++ACA S L ++H V + GF
Sbjct: 333 EGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFG 392
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
++ TALVHMY K GA+ A+ +FD+MP R++ +W+AMI +G+ EA + F +
Sbjct: 393 TDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLM 452
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
++ I P+ +T++ +L+AC H G +DVG +I+ + + + ++ + + G
Sbjct: 453 KRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKA-DLVSHVPLGNALIIMNAKHGS 511
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA----ERVVKEIIALEPNNHGVYVV 424
V A + MV + DV+ W A++ HGN A +R++KE PN+ V
Sbjct: 512 VERARYIFDTMV-RRDVITWNAMIGGYSLHGNAREALYLFDRMLKE--RFRPNSVTFVGV 568
Query: 425 LS 426
LS
Sbjct: 569 LS 570
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 188/368 (51%), Gaps = 4/368 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+ +I R + + + L+ S G+++ A ++F+S+++ WN LI A
Sbjct: 77 KQVRDHIIQGGRQLNIYELNTLIKL--YSICGNVTEARQIFDSVENKTVVTWNALIAGYA 134
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A L+ M G P+ TF VL ACS+ LN K++H V +G D
Sbjct: 135 QVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFR 194
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y +++ARQVFD + R ++ + M+ GYA+S +A LF +M G
Sbjct: 195 IGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG 254
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+PN ++ S+L C L G+ VH G + T+L+ MYT G++ A+
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD+M R++ +W MI G A +G+ E+A LF +++E I P+ IT++ +++AC +
Sbjct: 315 RVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISA 374
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ R+I + + G + +V + +CG + +A ++ M + DVV W A+
Sbjct: 375 NLNHAREIHSQVD-IAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP-RRDVVSWSAM 432
Query: 392 LAACKNHG 399
+ A +G
Sbjct: 433 IGAYVENG 440
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 157/291 (53%), Gaps = 2/291 (0%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ T+ + + C+ +R KQ+ H+ + G L+++ +N L++ YS+ ++ ARQ+F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
D + N+T+ W +I+GYAQ EA LF QM+ EG EP+ +T SVL AC+ L
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G++VH V GF +GTALV MY K G++ A+ +FD + R+++T+N M+ G A
Sbjct: 176 WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYA 235
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
G E+A +LF ++++ + PN I+F+ +L C + G+ + G+ I
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNA-GLVDDI 294
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++ + CG + A + M + DVV W ++ +GNIE A
Sbjct: 295 RVATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENGNIEDA 344
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 226/385 (58%), Gaps = 2/385 (0%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D F + L+ A S GD+ A LF+++Q WN +I + + + + ++
Sbjct: 205 DQFVLNSLIHMYA--SCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKG 262
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M ++ T V AC + N + I + + G+ ++ LV Y+ +
Sbjct: 263 MLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGE 322
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L+ AR++FD + +R + W+ MISGY QS R EAL +F++M PN VT+ SVLSA
Sbjct: 323 LDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSA 382
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CA G LE G+ VH +++ + + ILGTALV Y K G + A F+SMP RN TW
Sbjct: 383 CAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTW 442
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
A+I G+AS+G + EAL+LF + + I P D+TF+GVL AC H ++ GR+ F SM +
Sbjct: 443 TALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQ 502
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
YGI P+IEHYGCMVDLLGR G + EA + I+ M +P+ V+W ALL+AC H N+E+ E
Sbjct: 503 DYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGE 562
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYA 430
+K+I+ L+P + G Y++LSN YA
Sbjct: 563 EALKQIVPLDPCHSGNYILLSNTYA 587
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 199/411 (48%), Gaps = 20/411 (4%)
Query: 2 SLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQD-----HFAASRLLAF 56
+L + L P +P P + + ++ + Q+HA ++ S + H
Sbjct: 52 ALPAARLPAPGMPSP--ARQTPRRAALRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALP 109
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNM-RRTGFAP 113
+SS LSYA RLF P +N LIR+ + +P+ A+ L++ M T +P
Sbjct: 110 APATSSAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSP 169
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+QHT +K+CS + L+ + + + K G +D V+N L+ Y+ D+ A +F
Sbjct: 170 DQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLF 229
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
++ + + W MI+GY ++ E + +F ML + VTL SV +AC + G
Sbjct: 230 HTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDAN 289
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG+ + + + +G L TALV MY K G L KA+ LFD M R++ W+AMISG
Sbjct: 290 LGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYT 349
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
EAL +F +++ ++ PND+T V VLSAC G ++ G+ + ++R + +
Sbjct: 350 QSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRR-KDLPLTV 408
Query: 354 EHYGCMVDLLGRCGKVLEA----EELIKRMVWKPDVVMWGALLAACKNHGN 400
+VD +CG + +A E + R W W AL+ ++G
Sbjct: 409 ILGTALVDFYAKCGCIKDAVKAFESMPVRNTWT-----WTALIKGMASNGR 454
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 245/431 (56%), Gaps = 20/431 (4%)
Query: 11 PPLPIPPLSLLADKC-KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD----- 64
P P+ L C S H+L+ IHA I + ++ + L F +S S
Sbjct: 14 PEYPLTKCIYLLQFCASSKHKLRXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAY 73
Query: 65 ------LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
LSYA +F I +PN F WNT+ R A S NP A+ Y M + P+ HT+
Sbjct: 74 NVFTWVLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTY 133
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
F+LKA S ++ + IH+ ++G + + V N L+ Y+ D +A VF+ +R+
Sbjct: 134 PFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRD 193
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
R L ++I+G+A + R +EAL LF +M EG EP+ T+ S+LSA A+ G LELG +V
Sbjct: 194 RDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRV 253
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
HV++ G + + +L+ +Y AK A+++ ERN +W ++I GLA +G
Sbjct: 254 HVYLLKVGLRENSHVTNSLLDLY------AKCDAIWEX--ERNAVSWTSLIVGLAVNGFG 305
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EEAL+LFR++E + +VP++ITFVGVL AC H G +D G F MK +GI P+IEHYGC
Sbjct: 306 EEALELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGC 365
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
MVDLL R G V +A E I+ M +P+ V W LL AC HG++ + E ++ LEP +
Sbjct: 366 MVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKH 425
Query: 419 HGVYVVLSNMY 429
G YV+LSN+Y
Sbjct: 426 SGDYVLLSNLY 436
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 242/408 (59%), Gaps = 2/408 (0%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C+++ Q++Q+HAQ + +++ A++L+ F + + D +Y LF+ + + W+
Sbjct: 72 CRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG--LFDGMCVRDSVSWS 129
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
++ A + + + R G P+ +T FV++AC ++++L + IH V K
Sbjct: 130 VMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 189
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GLDLD V LV Y ++ +AR +FD+++ R L WT MI GYA+ +ANE+L+LF
Sbjct: 190 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 249
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
++M EG P+ V + +V+ ACA+ G + + +++ + F++ ILGTA++ MY K
Sbjct: 250 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 309
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + A+ +FD M E+N+ +W+AMI+ HG +ALDLF + ++P+ IT +L
Sbjct: 310 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLL 369
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC HAG ++ G + F SM Y + ++HY C+VDLLGR G++ EA +LIK M + D
Sbjct: 370 YACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKD 429
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGA L AC+ H ++ +AE+ ++ L+ N G YV+LSN+YA A
Sbjct: 430 EGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANA 477
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 238/406 (58%), Gaps = 2/406 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ Q++Q+H Q + +Q+ A++L+ F + + D +Y LF+ + + W+ +
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYG--LFDGMCVRDSVSWSVM 807
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
+ A + + + R G P+ +T FV++AC ++++L + IH V K GL
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
DLD V LV Y ++ +AR +FD++ R L WT MI GYA+ ANE+L+LFD+
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M EG P+ V + +V+ ACA+ G + + +++ + F++ ILGTA++ M+ K G
Sbjct: 928 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A+ +FD M E+N+ +W+AMI+ HG +ALDLF + + I+PN IT V +L A
Sbjct: 988 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 1047
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG ++ G + F M Y + ++HY C+VDLLGR G++ EA +LI M + D
Sbjct: 1048 CSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEG 1107
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGA L AC+ H ++ +AE+ ++ L+P N G Y++LSN+YA A
Sbjct: 1108 LWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANA 1153
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 142/281 (50%), Gaps = 2/281 (0%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
F + A N R+L +Q+H S G+ ++ V N L+ YS L++A +FD + R
Sbjct: 64 FYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 123
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W+ M+ G+A+ F +++ G P++ TL V+ AC L++G +H
Sbjct: 124 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH 183
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V G ++ + ALV MY K + A+ LFD M ER++ TW MI G A G A
Sbjct: 184 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 243
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
E+L LF K+ +E +VP+ + V V+ AC G + R I ++R + + M
Sbjct: 244 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR-KKFQLDVILGTAM 302
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+D+ +CG V A E+ RM K +V+ W A++AA HG
Sbjct: 303 IDMYAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYHGQ 342
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 155/414 (37%), Positives = 240/414 (57%), Gaps = 1/414 (0%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L KCKS+ + KQ+H Q++ D F +S +LA CALS + YA +F + P
Sbjct: 38 LVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEPTT 97
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F +NT+IR +++N + AI+LY +M + P+ T+ VLKAC+ + + QIH H
Sbjct: 98 FDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGH 157
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
V K GL+ D++V N L+ Y D+ + +F + +++ W+ +I+ +A E
Sbjct: 158 VFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWEC 217
Query: 201 LMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
L LF+ M EG + L +VLSAC G LG H + E+ + T+L+
Sbjct: 218 LALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMD 277
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G+L K LF +M +N +++ +ISGL HG+ +AL +F ++ +E + P+D+T
Sbjct: 278 MYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVT 337
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+V VLSAC H+G +D G +F MK Y IEP ++HYGCMVDL GR G + EA +L++ M
Sbjct: 338 YVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSM 397
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
K + V+W +LL+ACK H N+++ E + + L +N Y+VLSNMYA A+
Sbjct: 398 PIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQ 451
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 160/407 (39%), Positives = 241/407 (59%), Gaps = 3/407 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ +Q+H ++++S D +++L+ A + G + +A RLF+ + N F+WN L
Sbjct: 77 SLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYA--ACGQVGHARRLFDGMPKRNVFLWNVL 134
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
IRA A + A+ LY M G P+ T+ VLKAC+ + L +++H VS +
Sbjct: 135 IRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRW 194
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D+ V +V Y+ +++AR VFD I R VW +MI+ Y Q+ R EAL L
Sbjct: 195 GQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRD 254
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M G P TL S +SA A + L G ++H F RGF + L T+LV MY K+G
Sbjct: 255 MAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGW 314
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLS 325
+ A+ LF+ + +R + +WNAMI G HGHA+EAL LF K++ + Q+ P++ITFVGVLS
Sbjct: 315 VQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLS 374
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H G ++ ++ F M Y I+P ++HY C++D+LG G+ EA +LIK M +PD
Sbjct: 375 ACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDS 434
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL CK H N+E+ E ++++I LEP + G YV LSN+YA++
Sbjct: 435 GIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQS 481
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
H T +L++C SL +Q+H + SGL D + LV Y+ + +AR++FD
Sbjct: 63 HHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDG 122
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ R + +W +I YA+ A+ L+ M+ G EP++ T VL ACA LE G
Sbjct: 123 MPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETG 182
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+VH V + + +V MY K G + A+A+FD + R+ WN+MI+ +
Sbjct: 183 REVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQN 242
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIE 354
G EAL L R + I P T V +SA A + GR++ G +R +G++ K++
Sbjct: 243 GRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLK 302
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+VD+ + G V A L ++++ K ++V W A++ HG+ + A
Sbjct: 303 --TSLVDMYAKSGWVQVARVLFEQLM-KRELVSWNAMICGYGMHGHADEA 349
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 229/370 (61%), Gaps = 3/370 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFV 121
G+ A ++F+ I + WN+L+ A +A+ ++ +R +GF P++ + V
Sbjct: 166 GENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSV 225
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC + L + + V + G+ ++ ++ + L+ YS +L ++R++FD + +R
Sbjct: 226 LGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDF 285
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W IS YAQ+ A+EA+ LF M G +PN VTL +VLSACA G L+LG+++ +
Sbjct: 286 ITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEY 345
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
RG + + TAL+ MY K G+L A+ +F+ MP +N A+WNAMIS LASHG A+EA
Sbjct: 346 ATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEA 405
Query: 302 LDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
L LF ++ E PNDITFV +LSAC HAG +D G ++F M ++G+ PKIEHY CM
Sbjct: 406 LSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCM 465
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R G + EA ++I++M KPD V GAL +AC+ N+++ ERV++ ++ L+P+N
Sbjct: 466 VDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNS 525
Query: 420 GVYVVLSNMY 429
G Y++ S +Y
Sbjct: 526 GNYIISSKIY 535
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 225/412 (54%), Gaps = 15/412 (3%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN 73
PI L L +C S L+QIH Q I S + + S+ ++ D +Y+T +F+
Sbjct: 20 PIFLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISL------KDFTYSTLIFS 73
Query: 74 SIQ-SPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
I PN + +N ++RA ++ + + LY M+ +PN TF FV AC+N+ +
Sbjct: 74 HITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEI 133
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ H V K GLD D H VN +V Y + AR+VFDEI + L W +++SGY
Sbjct: 134 RMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGY 193
Query: 192 AQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
A+ A EA+ +F ++ E GFEP+ ++L SVL AC + G LELG V FV RG ++
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+ +G+AL+ MY+K G L ++ +FD MP R+ TWNA IS A +G A+EA+ LF +++
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKE 313
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
+ PN +T VLSAC G +D+G+Q+ G++ I ++D+ +CG +
Sbjct: 314 NGVDPNKVTLTAVLSACASIGALDLGKQM-DEYATHRGLQHDIFVATALIDMYAKCGSLE 372
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA----ERVVKEIIALEPNN 418
A+ + M K D W A+++A +HG + A ER+ E + PN+
Sbjct: 373 SAQRVFNDMPRKNDAS-WNAMISALASHGKAKEALSLFERMSDEGGSARPND 423
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 233/373 (62%), Gaps = 1/373 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S SGD+ A RLF+S+ WN++I A +A+ L+ M R G +PN T T
Sbjct: 251 SKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAITIT 310
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V C+ L+ ++ + + L ++ V L+ Y ++ AR FD + R
Sbjct: 311 TVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEARHEFDRMPRR 369
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W+TMI+GY+Q+ R +E+L LF++M +PN VTL VLSACAQ G ELGE++
Sbjct: 370 DVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIG 429
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+++ + + + LG+AL+ MYTK G +A+A+++F+ M ++ + TWN+MI GLA +G AE
Sbjct: 430 NYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAE 489
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+A+ L+RK+ + I PN++TFV +L+AC HAG +D G F MK+ + P++EH C+
Sbjct: 490 DAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACI 549
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL + G++ EA + I M +P+ V+W LL+AC+ H ++E+A+ +++ALEPNN
Sbjct: 550 VDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNS 609
Query: 420 GVYVVLSNMYAEA 432
+YV+LSN+YA+A
Sbjct: 610 SIYVLLSNIYADA 622
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 189/394 (47%), Gaps = 38/394 (9%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
LS++ A LF+ + P + + + + I + ++ R G A
Sbjct: 118 LSNASTYRAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCI 177
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV-------------------------- 152
VLK+C+ + Q H H G+ D+ V
Sbjct: 178 PLVLKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPV 237
Query: 153 -----VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+NCL+ YS S D+ AR++FD + RT W +MI+ YA EAL LFDQM
Sbjct: 238 KDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQM 297
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L EG PN++T+ +V S CA++G L+ G + +++ + I+ TAL+ MY K A+
Sbjct: 298 LREGASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAI 356
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A+ FD MP R++ W+ MI+G + +G E+L+LF +++ PN++T VGVLSAC
Sbjct: 357 DEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSAC 416
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
G ++G QI ++ P + G ++D+ +CG V A + RM K VV
Sbjct: 417 AQLGSDELGEQIGNYIES--QTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKV-VV 473
Query: 387 MWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
W +++ +G E A + ++++ ++PN
Sbjct: 474 TWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNE 507
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 230/410 (56%), Gaps = 2/410 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
++IH Q + F A+ L + G L Y RLF S+ + W T+I +
Sbjct: 189 REIHCQTLKKGFTAVSFVANTLATM--YNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNV 246
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ + MR T +PN+ TF V+ C+ + + +Q+H HV + GL L
Sbjct: 247 QIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLS 306
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N ++ YS L+ A VF + R + W+TMISGYAQ EA M EG
Sbjct: 307 VANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREG 366
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN ASVLS C LE G+++H V G E ++ +AL++MY+K G++ +A
Sbjct: 367 PRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEAS 426
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD NI +W AMI+G A HG+++EA+DLF+KL K + P+ +TF+ VL+AC HAG
Sbjct: 427 KIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAG 486
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+G F S+ +V+ I P +HYGCM+DLL R G++ +AE +I+ M ++ D V+W L
Sbjct: 487 LVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTL 546
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
L AC+ HG+++ +R ++I+ L+PN ++ L+NMYA K E+
Sbjct: 547 LRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEV 596
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 192/424 (45%), Gaps = 11/424 (2%)
Query: 10 QPPLPIPP--LSLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
+P L + P LSL C S+ + +H + + + F S L+ G
Sbjct: 61 EPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDM--YMKIGK 118
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
+ +F + N W +I + +A+ + +M + +TF+ LKA
Sbjct: 119 VDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKA 178
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C++ +LN ++IH K G V N L Y+ L+ ++F+ + R + W
Sbjct: 179 CADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSW 238
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
TT+I Q + A+ F +M PN T A+V+S CA G +E GE++H V
Sbjct: 239 TTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIR 298
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
RG + +++ MY+K L A +F + R+I +W+ MISG A G EEA D
Sbjct: 299 RGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDY 358
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
+ +E PN+ F VLS C + ++ G+Q+ + V G+E ++++
Sbjct: 359 LSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCV-GLEQNTMVQSALINMYS 417
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNHGVY 422
+CG + EA ++ + ++V W A++ HG + A + K++ + L P++
Sbjct: 418 KCGSIKEASKIFDEAEYN-NIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFI 476
Query: 423 VVLS 426
VL+
Sbjct: 477 AVLA 480
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 3/347 (0%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHT 117
L +G L+ A +LF+ + + W T+I + +N +A+ L+ M G +
Sbjct: 11 LVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFI 70
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ LKAC S++ + +H + K+ + V + LV Y ++ VF E+
Sbjct: 71 LSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMP 130
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R + WT +I+G ++ EAL F M ++ ++ T +S L ACA SG L G +
Sbjct: 131 LRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGRE 190
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +GF + + L MY K G L LF+SM +R++ +W +I G
Sbjct: 191 IHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQ 250
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E A+ FR++ + + PN+ TF V+S C G I+ G Q+ + R G+ +
Sbjct: 251 EENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIR-RGLVDSLSVAN 309
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++ + +C ++ A + + + + D++ W +++ G E A
Sbjct: 310 SIMAMYSKCWQLDLASTVFQGLS-RRDIISWSTMISGYAQGGCGEEA 355
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 140/281 (49%), Gaps = 7/281 (2%)
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+ +N +++ + LNNARQ+FD++ R WTT+ISGY EAL LF +M +
Sbjct: 1 MQEINLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWV 60
Query: 210 E-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
E G + L+ L AC + + GE +H + F +G+ALV MY K G +
Sbjct: 61 EPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVD 120
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+ +F MP RN+ +W A+I+GL G+ +EAL F + +++ + TF L AC
Sbjct: 121 EGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACA 180
Query: 329 HAGFIDVGRQIF-GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
+G ++ GR+I ++K+ + + + + + +CGK+ L + M + DVV
Sbjct: 181 DSGALNYGREIHCQTLKKGFTAVSFVAN--TLATMYNKCGKLDYGLRLFESMT-QRDVVS 237
Query: 388 WGALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVLS 426
W ++ + G E A + + + + PN V+S
Sbjct: 238 WTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVIS 278
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 210/362 (58%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
+N L+ S+ A+ L+ M G N T ++ AC + +L +H
Sbjct: 111 YNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL 170
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G D D+ VVNC + Y +N A+++FDE+ + L W M+SGYAQ+ A L
Sbjct: 171 KYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLE 230
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
L+ M M G P+ VTL VLS+CA G +G +V ++ GF L AL++MY
Sbjct: 231 LYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYA 290
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
+ G L KA+A+FD MPER + +W A+I G HGH E A+ LF+++ + I P+ FV
Sbjct: 291 RCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVC 350
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSAC HAG D G + F MKR Y +EP EHY CMVDLLGR G++ EA+ LI+ M K
Sbjct: 351 VLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIK 410
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
PD +WGALL ACK H N+E+AE + +I LEP N G YV+LSN+Y+ A + K L I
Sbjct: 411 PDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIR 470
Query: 443 LV 444
++
Sbjct: 471 IM 472
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 191/359 (53%), Gaps = 12/359 (3%)
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
N++ +P WNT +R A +A+ LY M R G PN TF F LK+C+ +
Sbjct: 2 NALSTP----WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPI 57
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE-IRNRTLNV-WTTMISG 190
Q H ++K G + V L+ Y S ++NAR+VF+E +R L V + ++SG
Sbjct: 58 LGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSG 117
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
Y + + ++A++LF QM EG NSVTL ++ AC LELG +H GF+
Sbjct: 118 YVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSD 177
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+ + MY K G++ A+ LFD MP + + +WNAM+SG A +G A L+L+R ++
Sbjct: 178 VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDM 237
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ P+ +T VGVLS+C + G VG ++ F + P + + ++++ RCG +
Sbjct: 238 NGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNL 295
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
+A+ + M + +V W A++ HG+ E+A ++ KE+I +EP+ VLS
Sbjct: 296 TKAQAVFDGMPER-TLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 353
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 6/266 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G ++YA +LF+ + WN ++ A + + LY NM G P+ T VL
Sbjct: 192 GSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVL 251
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+C+N+ + + ++ + SG + + N L+ Y+ +L A+ VFD + RTL
Sbjct: 252 SSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLV 311
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVF 241
WT +I GY A+ LF +M+ G EP+ VLSAC+ +G + G E +
Sbjct: 312 SWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMM 371
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASHGHAEE 300
+ E G + +V + + G L +A+ L +SMP + + A W A++ H + E
Sbjct: 372 KRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVEL 431
Query: 301 A-LDLFRKLEKEQIVPNDITFVGVLS 325
A L R +E E P +I + +LS
Sbjct: 432 AELAFERVIELE---PENIGYYVLLS 454
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 243/406 (59%), Gaps = 5/406 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+ + ++H +I SS+ D + LL C ++ LSYA +F+ I SP+ +NT+I
Sbjct: 1 MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTII 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R+ S P ++ + +MR G + TF FVLKACS L +H+ + K GL
Sbjct: 61 RSH-SRFFPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSR---LQINLHLHSLIVKYGLG 116
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D+ V N L+ Y L A +VFDE+ R W+T+I+ + + A+EAL LF++M
Sbjct: 117 SDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKM 176
Query: 208 LMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+E P+ VT+ SV+SA + G LELG V F+ GF + LGTAL+ M+++ G+
Sbjct: 177 QLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGS 236
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ ++ +F+ M RN+ TW A+I+GL HG + EAL +F + K + P+ +TF GVL A
Sbjct: 237 IDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVA 296
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G + G IF S+++VYG++P ++HYGCMVD+LGR G + EA + ++RM KP+ +
Sbjct: 297 CSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSI 356
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+W LL AC NH N+ +AE+V +I + + +G V+LSN+Y A
Sbjct: 357 IWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAA 402
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 239/401 (59%), Gaps = 3/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H Q++ D + + LL A + GDL A LF + N +W ++I
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYA--ACGDLKSARFLFERMGHRNKVVWTSMISGYM 156
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ P++A+ LY M GF+P++ T ++ AC+ ++ L ++H+H+ + + +
Sbjct: 157 KNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM-E 210
+ + LV Y+ DL ARQVFD++ ++ + W+ +I GY ++ R+ EAL LF ++
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
PN VT+ +V+SACAQ G LE G VH ++ L +L+ M++K G + A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
K +FDSM +++ +WN+M++GLA HG EAL F ++ + P++ITF+GVL+AC HA
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHA 396
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + G+++F ++ +YG+ K EHYGCMVDLL R G + EA E I+ M +PD +WG+
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+L AC+ + N+E+ E + ++ LEP N GVY++LSN+YA
Sbjct: 457 MLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYAR 497
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 203/364 (55%), Gaps = 4/364 (1%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M+++ I + ++L+A S + YA +F + + WN+++RA +S P
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60
Query: 98 KAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+A+ Y M R+ P++ TF +LK C+ + K +H V K L DL++ L
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ Y+ DL +AR +F+ + +R VWT+MISGY ++ NEAL+L+ +M +GF P+
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
VT+A+++SACA+ L +G K+H ++ ++ A+LG+ALV+MY K G L A+ +FD
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDV 335
+ ++++ W+A+I G + + EAL LFR++ + PN++T + V+SAC G ++
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
GR + + R + ++D+ +CG + A+ + M +K D++ W +++
Sbjct: 301 GRWVHDYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGL 358
Query: 396 KNHG 399
HG
Sbjct: 359 ALHG 362
>gi|357520897|ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 447
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 224/364 (61%), Gaps = 4/364 (1%)
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
TR S +P F WN +IR+ +P A+ +Y++M R G P+++T VLKA S
Sbjct: 53 TRFLES--NPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQS 110
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
++ +Q+H++ K GL + + + + Y + D ++A +VFDE L W +I
Sbjct: 111 FAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALI 170
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGF 247
SG +Q A +A+++F M GFEP+ +T+ SV+SAC G L L ++H +V + +
Sbjct: 171 SGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTN 230
Query: 248 EMGAIL-GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
E IL +L+ MY K G + A +F +M +RN+++W +MI G A HGHA+EAL F
Sbjct: 231 EWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFH 290
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+ + + PN +TF+GVLSAC H G + GR F MK +YGI P+++HYGCMVDLLGR
Sbjct: 291 CMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRA 350
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
G +A +++ M KP+ V+WG L+ AC+ HGN+++AE V + + ALEP N GVYVVLS
Sbjct: 351 GLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLS 410
Query: 427 NMYA 430
N+YA
Sbjct: 411 NIYA 414
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 8/275 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+H+ I + + S + +C +GD A ++F+ P WN LI
Sbjct: 117 QQVHSYGIKLGLQSNEYCESGFINLYC---KAGDFDSAHKVFDENHEPKLGSWNALISGL 173
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV--SKSGLDL 148
+ AI ++++M+R GF P+ T V+ AC ++ L Q+H +V +K+
Sbjct: 174 SQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWT 233
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ + N L+ Y ++ A +VF + +R ++ WT+MI GYA A EAL F M
Sbjct: 234 VILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMR 293
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK-MRGFEMGAILGTALVHMYTKNGAL 267
G +PN VT VLSAC G ++ G +K + G +V + + G
Sbjct: 294 ESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLF 353
Query: 268 AKAKALFDSMPER-NIATWNAMISGLASHGHAEEA 301
A+ + + MP + N W ++ HG+ + A
Sbjct: 354 DDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMA 388
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 259/492 (52%), Gaps = 80/492 (16%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
RQPP +C+S+ +KQ+HA M + + D LL A++ G +++A
Sbjct: 10 RQPPA--------WRRCRSLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHA 61
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM----RRTGFAPNQHTFTFVLKA 124
+F+ I P+ FM+NTLIR A + P A+ LY M G P++ TF FVL+A
Sbjct: 62 YLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRA 121
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV---------------------- 162
C+ + + + Q+H HV K+G + D V N L+ ++
Sbjct: 122 CTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAW 181
Query: 163 ---------SSDLNNARQVFDE-------------------------------IRNRTLN 182
D+ AR +FDE + R +
Sbjct: 182 SAMITGCARRGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVV 241
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV-- 240
W MISGY + AL LF+QM G +P+ VT+ S+LSACA SG L++G+++H
Sbjct: 242 SWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSL 301
Query: 241 --FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
GF + +LG AL+ MY K G++ A +F SM +++++TWN+++ GLA HGH
Sbjct: 302 SDMFSRNGFPV--VLGNALIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHV 359
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
E++D+F K+ K ++ P++ITFV VL AC H G +D GR+ F M+ Y +EP I+HYGC
Sbjct: 360 LESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGC 419
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
MVD+LGR G + EA E I M +P+ V+W LL+AC+ HG IE+A+ ++++ +
Sbjct: 420 MVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDE 479
Query: 419 HGVYVVLSNMYA 430
G YV+LSN+YA
Sbjct: 480 SGDYVLLSNIYA 491
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 158/332 (47%), Gaps = 23/332 (6%)
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV--RCYSVSSDLNNARQVFDEIRNRTL 181
A RSL KQ+H ++ G D + L+ +V + +A VFD+I
Sbjct: 14 AWRRCRSLRHIKQMHAVMALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDR 73
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEG----FEPNSVTLASVLSACAQSGCLELGEK 237
++ T+I G A + +A+ L+ +ML G P+ +T VL AC G + G +
Sbjct: 74 FMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQ 133
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH V G E A + AL+ M+ G L A ALFD + W+AMI+G A G
Sbjct: 134 VHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGD 193
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A DLF + + +V ++ +++A G + + R++F + E + +
Sbjct: 194 IGAARDLFDECPVKDLVSWNV----MITAYAKRGDMALARELFDQVP-----ERDVVSWN 244
Query: 358 CMVDLLGRCGKVLEAEEL---IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
M+ RCG L A EL ++RM KPD+V +LL+AC + G+++V +R+ + +
Sbjct: 245 VMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDM 304
Query: 415 EPNNHGVYVVLSN----MYAEAESMKMQLEIL 442
N G VVL N MYA+ SMK E+
Sbjct: 305 FSRN-GFPVVLGNALIDMYAKCGSMKSAHEVF 335
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 246/421 (58%), Gaps = 4/421 (0%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
PPL K + + Q HA ++ D F + L++ SSSG +A+RLF+
Sbjct: 107 FPPLLKAVFKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLIS--GYSSSGLFDFASRLFDG 163
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ + W +I + + +A+ ++ M++TG A N+ T VLKA V +
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 135 KQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ +H ++G + D+ + + LV Y S ++A++VFDE+ +R + WT +I+GY Q
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
S ++ +++F++ML PN TL+SVLSACA G L G +VH ++ E+
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA 343
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT L+ +Y K G L +A +F+ + E+N+ TW AMI+G A+HG+A +A DLF + +
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV 403
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN++TF+ VLSAC H G ++ GR++F SMK + +E K +HY CMVDL GR G + EA+
Sbjct: 404 SPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEEAK 463
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
LI+RM +P V+WGAL +C H + E+ + +I L+P++ G Y +L+N+Y+E++
Sbjct: 464 ALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQ 523
Query: 434 S 434
+
Sbjct: 524 N 524
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 207/405 (51%), Gaps = 13/405 (3%)
Query: 30 QLKQIHAQMIISSRI---QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
LKQIH ++ S +D F SRLL C +++ YA RL +Q+ + +W++L
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFL-SRLLRRCC-TAATQFRYARRLLCQLQTLSIQLWDSL 73
Query: 87 IR--AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
I + +LN + Y +MRR G P++HTF +LKA +R N Q H H+ K
Sbjct: 74 IGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF-QFHAHIVKF 132
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GLD D V N L+ YS S + A ++FD ++ + WT MI G+ ++ A+EA++ F
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAILGTALVHMYTK 263
+M G N +T+ SVL A + + G VH ++++ + +G++LV MY K
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
A+ +FD MP RN+ TW A+I+G ++ + +F ++ K + PN+ T V
Sbjct: 253 CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC H G + GR++ M + IE ++DL +CG + EA + +R+ K
Sbjct: 313 LSACAHVGALHRGRRVHCYMIK-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK- 370
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+V W A++ HG A + +++ + PN VLS
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLS 415
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 232/405 (57%), Gaps = 31/405 (7%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +LF+ + + W+ LI + ++AI ++ M + G ++ L AC+N
Sbjct: 194 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 253
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL--------------------- 166
+ +N K IH+ K G + +++ N L+ YS D+
Sbjct: 254 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSM 313
Query: 167 ----------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+NA+ +FD + + + W++MISGYAQ+ +E L LF +M M GF+P+
Sbjct: 314 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDE 373
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
TL SV+SACA+ LE G+ VH ++K G + ILGT L+ MY K G + A +F
Sbjct: 374 TTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYG 433
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
M E+ I+TWNA+I GLA +G E +LD+F ++K + PN+ITF+GVL AC H G +D G
Sbjct: 434 MIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG 493
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
+ F SM + I+P ++HYGCMVDLLGR GK+ EAEEL+ RM PDV WGALL ACK
Sbjct: 494 QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACK 553
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
HG+ E+ RV +++I L+P++ G +V+LSN+YA LEI
Sbjct: 554 KHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEI 598
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 207/458 (45%), Gaps = 95/458 (20%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M+++ I++ +AASRL+ F + Y R+FN I++ N FMWN +IRA + +P
Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
A LY +M + +T+ +++ACS RS KQ+H HV K G D D++V N L+
Sbjct: 61 FAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLI 120
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ-----------------SFRAN-- 198
C+SV S++ +A +VF+E W ++++GY + S A+
Sbjct: 121 NCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNS 180
Query: 199 ------------EALMLFDQMLME--------------------------GFEPNSVTLA 220
EA LFD+ML + G V +
Sbjct: 181 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 240
Query: 221 SVLSACAQSGC-----LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA------- 268
V++ A S C + +G+ +H G E L AL++MY+K G +
Sbjct: 241 EVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFD 300
Query: 269 ------------------------KAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
AKA+FDSMPE+++ +W++MISG A + +E L L
Sbjct: 301 EAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLAL 360
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F++++ P++ T V V+SAC ++ G+ + +KR G+ + ++D+
Sbjct: 361 FQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR-NGLTINVILGTTLIDMYM 419
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+CG V A E+ M+ K + W AL+ +G +E
Sbjct: 420 KCGCVETALEVFYGMIEK-GISTWNALILGLAMNGLVE 456
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 253/485 (52%), Gaps = 68/485 (14%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDH--FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
CKS+ LKQIHA +I + D ++RL A CA S D YA L +++PN +
Sbjct: 47 CKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPL 106
Query: 83 WNTLIRAQASSLNPD-KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
+N +IR A+S N + + +Y M G P+ +T FVLKAC+ R++ +++H
Sbjct: 107 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQA 166
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K GL D++V N L+R Y+V + +AR+VFD R L WTTMI GY + A E +
Sbjct: 167 IKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGV 226
Query: 202 MLF------------------------------DQMLMEGFEPNSVTLASVLSACAQSG- 230
L+ ++ E N V+ S++S AQ G
Sbjct: 227 GLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQ 286
Query: 231 ----------------------------------CLELGEKVHVFVKMRGFEMGAILGTA 256
LELG+ VH ++ +G A
Sbjct: 287 FKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNA 346
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
LV MY K G++ +A +F +M +++ ++ AMI GLA HG +ALDLF ++ K I P+
Sbjct: 347 LVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPD 406
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
++TFVGVL+AC H G ++ GR+ F M +Y + P++EHYGCMVDLLGR G + EAEE I
Sbjct: 407 EVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFI 466
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ M +PD + GALL ACK HG +E+ E V+K+I +EP G YV++SN+Y+ A +
Sbjct: 467 RNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWR 526
Query: 437 MQLEI 441
L++
Sbjct: 527 DALKL 531
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 251/438 (57%), Gaps = 33/438 (7%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C ++ L+Q H ++ + Q+ SR + A + SY+ FN + F++N
Sbjct: 23 CTTLTHLQQTHTFILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFPIFVYN 82
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I A SS N A+ ++ ++RR G + + ++ +VLK+ + KQIH +
Sbjct: 83 NIIYALYSS-NAKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVT 141
Query: 145 GLDLDLHVVNCLVR---CYSVSS--------------------------DLNNARQVFDE 175
GLD ++ V + L++ CY V S D++NAR++FD
Sbjct: 142 GLDKNVSVCSSLIQMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNARKLFDS 201
Query: 176 IRNRTLNV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
+ R +V WT MISGY Q+ NEA+ LF +M +E +P+ + + +VLSACA G L
Sbjct: 202 MLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALH 261
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LGE +H +++ L +L+ MY K+G + KA LF++M + I TW MI+GLA
Sbjct: 262 LGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLA 321
Query: 294 SHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
HG +EAL +F +EKE ++ PN++TF+ +LSAC H G +++GR F SM+ YGIEPK
Sbjct: 322 LHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPK 381
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
IEHYGCM+DLLGR G + EA+E++ RM ++ + +WG+LLAA G+ E+AE ++ +
Sbjct: 382 IEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLT 441
Query: 413 ALEPNNHGVYVVLSNMYA 430
LEP + G Y +LSN YA
Sbjct: 442 VLEPGHCGNYSLLSNTYA 459
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 246/450 (54%), Gaps = 40/450 (8%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLS--------YATRLFNS 74
+CKS+ QL Q+HA I + + H F + S S YA LF+S
Sbjct: 9 QCKSISQLHQVHAHSITTGLLPLHTFPILNNILSTLSSLLTTSSNSNSIITFYALSLFHS 68
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I +P+ F +NTLIR L+P A+ L+ +RR P+ HTF FVLKA + + SL+
Sbjct: 69 IPNPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLKASAQLHSLSLA 128
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN-------------------------- 168
+ +H+ K GL DL +N L+ YS+ +N+
Sbjct: 129 QSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHGLVKT 188
Query: 169 -----ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
AR++FDE+ R W TMI+GY+ N+A+ LF++M+ +P+++ L SVL
Sbjct: 189 RQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQAIELFNEMMRLEVKPDNIALVSVL 248
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQ G LE G VH ++K + + L T LV +Y K G + A+ +F+S E+ +
Sbjct: 249 SACAQLGELEQGSIVHDYIKRNRIRVDSYLATGLVDLYAKCGCVETARDVFESCMEKYVF 308
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
TWNAM+ G A HG L+ F ++ E + P+ +T +GVL C HAG + R+IF M
Sbjct: 309 TWNAMLVGFAIHGEGSMVLEYFSRMVSEGVKPDGVTLLGVLVGCSHAGLVLEARRIFDEM 368
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ VYG++ + +HYGCM D+L R G + E E++K M DV WG LL C+ HGN+EV
Sbjct: 369 ENVYGVKREGKHYGCMADMLARAGLIEEGVEMVKAMPSGGDVFAWGGLLGGCRIHGNVEV 428
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
A++ ++++ ++P + GVY V++N+YA E
Sbjct: 429 AKKAAQQVMEIKPEDGGVYSVMANIYAHTE 458
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 242/443 (54%), Gaps = 36/443 (8%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMW 83
C ++Q+KQ+HA + Q F ++LL L D Y +F ++ PN F+W
Sbjct: 49 CTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMD-PYPRLVFQQVEYPNPFLW 107
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH-VS 142
LIR A +++ LY +MRR G P TFT +LKACS +N +Q+HT +
Sbjct: 108 TALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTIL 167
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT---------------------- 180
G DL+V N L+ Y L +VFDE+ +R
Sbjct: 168 IGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASE 227
Query: 181 ---------LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
+ WT M++GYAQ+ R EAL +F++M G + + VTL V+SACAQ G
Sbjct: 228 LFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGA 287
Query: 232 LELGEKVHVFVKMRGF--EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
+ V + GF ++G+AL+ MY K G++ A +F+ M ERN+ ++++MI
Sbjct: 288 AKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMI 347
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
G A HG A A++LF ++ K +I PN +TF+GVL+AC HAG ++ G+Q+F M+ +G+
Sbjct: 348 VGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGV 407
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
P +HY CMVDLLGR G++ EA L+K M P +WGALL AC+ HGN ++A+
Sbjct: 408 APSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAAS 467
Query: 410 EIIALEPNNHGVYVVLSNMYAEA 432
+ LEPN G Y++LSN+YA A
Sbjct: 468 HLFELEPNGIGNYILLSNIYASA 490
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 241/407 (59%), Gaps = 7/407 (1%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA---TRLFNSIQSPNHFMWNTL 86
+ Q+ +QMI++ DH +L+ F ++SS G + A T+ + I S + N++
Sbjct: 58 HMNQMLSQMIMNYIPIDHLNLMKLIDF-SVSSHGFAASALLFTQFYGFIDSD---LCNSM 113
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
IR S ++F+Y M + G P+ TF VLK+ + + K IH + + G
Sbjct: 114 IRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGF 173
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ +++V LV Y S +++ARQVFDEI +R + W +I+GY + + + +F +
Sbjct: 174 ESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFRE 233
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M + G +P VT+ VL ACA G L G + ++ + +GTAL+ MY K G
Sbjct: 234 MQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGV 293
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ +A+ +F +M +N+ TWN +ISG A +G E AL F ++ E+ P+++TF+GVL A
Sbjct: 294 VDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCA 353
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCH G ++ GR F SMK +G+ P+IEHYGCMVDLLGR G + EA++LI+ M +PD +
Sbjct: 354 CCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPI 413
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+W LL AC+ HGNI++ E +K+++ LEPNN YV+L+N+YA +
Sbjct: 414 IWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQ 460
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 238/406 (58%), Gaps = 3/406 (0%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATRLFNSIQSPNHFMWNTLIR 88
+L QIHA +I ++ IQ + + L+ ALS D SY+ R F + P +NT+IR
Sbjct: 18 RLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQLSHPLVSHYNTMIR 77
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
A + S +P K + LY +MRR G A + + +F +K+C L Q+H ++ K G
Sbjct: 78 ACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDGHQW 137
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D ++ ++ YS+ +A +VFDE+ +R W MIS ++ R +AL LFD M
Sbjct: 138 DTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQ 197
Query: 209 MEGF--EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+ EP+ VT +L ACA LE GE++H ++ RG+ L +L+ MY++ G
Sbjct: 198 GSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGC 257
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L KA +F M +N+ +W+AMISGLA +G+ EA++ F ++ + ++P+D TF GVLSA
Sbjct: 258 LDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSA 317
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C ++G +D G F M R +G+ P + HYGCMVDLLGR G + +A +LI MV KPD
Sbjct: 318 CSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDST 377
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
MW LL AC+ HG++ + ERV+ +I L+ G YV+L N+Y+ A
Sbjct: 378 MWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSA 423
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 250/454 (55%), Gaps = 41/454 (9%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL-SYATRLFNSIQ 76
L+ L KC+++ QLKQIHA ++ S + FA +LL+ A S++ S+A +F ++
Sbjct: 14 LNSLLKKCRALSQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPSFFSHACLIFQNLS 73
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS----LN 132
N FM+N++IR S +P +AI Y++M G N +TF ++KAC+ + S +
Sbjct: 74 LRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKLIG 133
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
C +H HV G D D VV+ L+ YS++ D+ AR +FD I NR + +WT MI GY
Sbjct: 134 CL--VHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYG 191
Query: 193 Q--------------------SFRA-----------NEALMLFDQMLMEGFEPNSVTLAS 221
+ S+ A E L LF +M G PN L S
Sbjct: 192 KMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVS 251
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
VL+ACA G L G VH + K F+ IL TALV MY+K G + A + F +P ++
Sbjct: 252 VLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKD 311
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
WNAMISG+A +G A ++L+LF K+ P + TFV VL+AC HA + G ++F
Sbjct: 312 AGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFE 371
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM---VWKPDVVMWGALLAACKNH 398
M YG+EP++EHY C+VDL+ R G + EAE+ I+ + + D +WGA+L AC+ +
Sbjct: 372 QMSSNYGVEPQLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTY 431
Query: 399 GNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
GNIEV RV K++ + + G +V+ N+Y EA
Sbjct: 432 GNIEVGNRVWKKLADMGVADCGTHVLSYNLYREA 465
>gi|302142959|emb|CBI20254.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 248/408 (60%), Gaps = 10/408 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + +L+ ++A MI ++ QD F ++ +A C++ D YA F +Q PN F++
Sbjct: 21 KCSMVKELESVYASMIKANANQDCFLMNQFIAACSIFHRID--YAILAFTHMQEPNVFVY 78
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N +IRA +P +A+ Y++M + +P TF+ ++KACS V L + +H H+ K
Sbjct: 79 NAMIRALVQCYHPVQALDCYLDMVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWK 138
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
G D + V LV Y + + AR+VFDE+ R + WTTMIS +A++ + A L
Sbjct: 139 YGFDSHVFVQTALVDFYGNAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQL 198
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
FD+M + N+ + +++ ++ +E E + F +M ++ I T ++ Y++
Sbjct: 199 FDEMPVR----NTASWNAMIDGYSRLRNVESAELL--FSQMPNRDI--ISWTTMIACYSQ 250
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
N L K+ +F + ++N+ WN++I GLA HG+AEEAL +F ++++E+I PN +TF+ V
Sbjct: 251 NKHLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISV 310
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC HAG ++ GR+ F SM R + I P+IEHYGCMVDLLG+ G + +A EL++ M +P
Sbjct: 311 LGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEP 370
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+ V+WGALL CK H N+++A+ V E LEPNN G Y +L NMYAE
Sbjct: 371 NSVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNNSGYYTLLVNMYAE 418
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 231/390 (59%), Gaps = 3/390 (0%)
Query: 50 ASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDK--AIFLYMNMR 107
+ +LL FCA+S SG L+YA +F+ I +P WN++IR + S +P + AI Y +M
Sbjct: 433 SEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHML 492
Query: 108 RTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
A P+ +TF+F+LKAC + C+++H + + G D D+ + L+R Y+ + +
Sbjct: 493 SASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLI 552
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
A +VF+E+ R L W +MIS Y Q+ EAL ++DQM + + TL S+LS+C
Sbjct: 553 ETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSC 612
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A G L +G ++H F R +G AL+ MY K G+LA A ++F+SMP+R++ TWN
Sbjct: 613 AHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWN 672
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+MI G HG +EA+ F + + PN ITF+G+L C H G + G Q F M
Sbjct: 673 SMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSE 732
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
+ ++P I+HYGCMVDL GR GK+ EA E+I+ + D V+W LL +CK H N+E+ E
Sbjct: 733 FNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEM 792
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
++ ++ L G V+LS +YAEA+ ++
Sbjct: 793 AMRNLVQLGSLGAGDCVLLSGIYAEAKDLQ 822
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 247/407 (60%), Gaps = 8/407 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
++H ++ + QD F A++L+ S G + YA ++F+ + ++WN L RA
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC----SNVRSLNCCKQIHTHVSKSGLDL 148
+ + ++ + LY M R G ++ T+T+VLKAC V L K+IH H+++ G
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++++ LV Y+ ++ A VF + R + W+ MI+ YA++ +A EAL F +M+
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 209 MEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
E + PNSVT+ SVL ACA LE G+ +H ++ RG + + +ALV MY + G
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L + +FD M +R++ +WN++IS HG+ ++A+ +F ++ P +TFV VL A
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G ++ G+++F +M R +GI+P+IEHY CMVDLLGR ++ EA ++++ M +P
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+WG+LL +C+ HGN+E+AER + + ALEP N G YV+L+++YAEA+
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQ 502
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 8/308 (2%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
+P+Q T+ ++ C + SL+ ++H H+ +G D D + L+ YS ++ AR+
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFD+ R RT+ VW + + E L L+ +M G E + T VL AC S C
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 232 ----LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
L G+++H + RG+ + T LV MY + G + A +F MP RN+ +W+A
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 288 MISGLASHGHAEEALDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
MI+ A +G A EAL FR++ +E PN +T V VL AC ++ G+ I G + R
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
G++ + +V + GRCGK+ + + RM DVV W +L+++ HG + A
Sbjct: 314 -RGLDSILPVISALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 406 RVVKEIIA 413
++ +E++A
Sbjct: 372 QIFEEMLA 379
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 6/211 (2%)
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
++L + P+ T ++ C L +VH + G + L T L+ MY+ G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
++ A+ +FD +R I WNA+ L GH EE L L+ K+ + + + T+ VL
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 326 AC----CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
AC C + G++I + R G + +VD+ R G V A + M
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTR-RGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ +VV W A++A +G A R +E++
Sbjct: 246 R-NVVSWSAMIACYAKNGKAFEALRTFREMM 275
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 252/461 (54%), Gaps = 44/461 (9%)
Query: 12 PLPIPPLSLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSY 67
P + +SLL + C +++++ ++IH+ + D A+ L+ +C + D
Sbjct: 278 PNAVTFVSLL-NSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQD--- 333
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKA----IF-LYMNMRRTGFAPNQHTFTFVL 122
A F+ + + W+ +I A S DK +F L MRR G PN+ TF +L
Sbjct: 334 ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSIL 393
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLH----VVNCLVRCYSV---------------- 162
KACS +L +QIH +SK G + D + N +C S+
Sbjct: 394 KACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV 453
Query: 163 -----------SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
DL +A +VF E+ R + W MI+GYAQS + L M +EG
Sbjct: 454 AWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEG 513
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+P+ VT+ S+L AC LE G+ VH G E ++ T+L+ MY+K G + +A+
Sbjct: 514 FQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEAR 573
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD + R+ WNAM++G HG EA+DLF+++ KE++ PN+ITF V+SAC AG
Sbjct: 574 TVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAG 633
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ GR+IF M+ + ++P +HYGCMVDLLGR G++ EAEE I+RM +PD+ +W AL
Sbjct: 634 LVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHAL 693
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L ACK+H N+++AE I+ LEP+N VYV LSN+YA+A
Sbjct: 694 LGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQA 734
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 210/393 (53%), Gaps = 9/393 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
K + K +H Q+ D + + L+ F S GD++ ++F + + W
Sbjct: 90 KLRRFEDGKMVHKQLDELGLAIDIYLGNSLINF--YSKFGDVASVEQVFRRMTLRDVVTW 147
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+++I A A + +P KA + M+ PN+ TF +LKAC+N L ++IHT V
Sbjct: 148 SSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKA 207
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
SG++ D+ V L+ YS +++ A ++F +++ R + WT +I AQ + NEA L
Sbjct: 208 SGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFEL 267
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
+++ML G PN+VT S+L++C L G ++H + RG E ++ AL+ MY K
Sbjct: 268 YEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCK 327
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAE-EALD----LFRKLEKEQIVPNDI 318
+ A+ FD M +R++ +W+AMI+G A G+ + E+LD L ++ +E + PN +
Sbjct: 328 CNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKV 387
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TF+ +L AC G ++ GRQI + +V G E + ++ +CG + EAE++ +
Sbjct: 388 TFMSILKACSVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQVFSK 446
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
M K +VV W +LL G++ AE+V E+
Sbjct: 447 MENK-NVVAWASLLTMYIKCGDLTSAEKVFSEM 478
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 158/302 (52%), Gaps = 2/302 (0%)
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
+AI L +++ G N +T+ +++ C+ +R K +H + + GL +D+++ N L+
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
YS D+ + QVF + R + W++MI+ YA + +A F++M EPN +
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRI 180
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T S+L AC LE ++H VK G E + TAL+ MY+K G ++ A +F M
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
ERN+ +W A+I A H EA +L+ K+ + I PN +TFV +L++C ++ GR
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGR 300
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
+I + G+E + ++ + +C + +A E RM K DV+ W A++A
Sbjct: 301 RIHSHISE-RGLETDVVVANALITMYCKCNCIQDARETFDRMS-KRDVISWSAMIAGYAQ 358
Query: 398 HG 399
G
Sbjct: 359 SG 360
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 120/238 (50%), Gaps = 9/238 (3%)
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
VW +G R EA+ L + G NS T ++ CA+ E G+ VH
Sbjct: 49 EVWRLCKAG-----RLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQ 103
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ G + LG +L++ Y+K G +A + +F M R++ TW++MI+ A + H +A
Sbjct: 104 LDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKA 163
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
D F +++ I PN ITF+ +L AC + ++ R+I +K G+E + ++
Sbjct: 164 FDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVK-ASGMETDVAVATALIT 222
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
+ +CG++ A E+ ++M + +VV W A++ A H + A + ++++ + PN
Sbjct: 223 MYSKCGEISLACEIFQKMK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPN 279
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 175/425 (41%), Positives = 258/425 (60%), Gaps = 19/425 (4%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDH----FAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
++CK M QLKQIHA + + S + +H F SR+L F SS DL+YA R+F+ + +P
Sbjct: 30 NECKDMSQLKQIHA-LSLRSTLPNHSTTLFLYSRILHF---SSLHDLNYAYRVFDQVDNP 85
Query: 79 NHFMWNTLIRAQASSLN---PDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCC 134
N FMWN LIRA A S + +AI LY M +R+ P+ HTF FVLKAC+ + +L
Sbjct: 86 NSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACAYLFALFEG 145
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
KQ H H+ K G D+++ N L+ Y+ L +A+ VFD++ R+L W MI +
Sbjct: 146 KQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLF 205
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMG--- 250
AL LF Q + FEP+ T+ SV++ACA L LG H F+ + G +
Sbjct: 206 GEFETALQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDH 265
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
++ +L+ MY K G+L A +F+ M + ++ +WN+MI G A HG E AL+ F ++ +
Sbjct: 266 VLVNNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIR 325
Query: 311 -EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ VPN ITFVGVLSAC H ++ GR+ F M Y IEP++EHYGC+VD+L R G +
Sbjct: 326 ISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLI 385
Query: 370 LEAEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEII-ALEPNNHGVYVVLSN 427
EA EL+ M KPDVV+W +LL + CK + ++E++E + ++I+ + E ++ GVYV+LS
Sbjct: 386 DEALELVASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSR 445
Query: 428 MYAEA 432
+YA A
Sbjct: 446 VYASA 450
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 242/409 (59%), Gaps = 5/409 (1%)
Query: 25 CKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C HQL K+IH ++D A+ +A A SS L A R+F ++
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSS--LDCAERVFCGMEGKTVS 468
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WN LI A A + P K++ L++ M +G P++ T +L AC+ ++ L C K+IH +
Sbjct: 469 SWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFM 528
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
++GL+LD + L+ Y S + + +FD++ N++L W MI+G++Q+ EAL
Sbjct: 529 LRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEAL 588
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
F QML G +P + + VL AC+Q L LG++VH F A + AL+ MY
Sbjct: 589 DTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMY 648
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + +++ +FD + E++ A WN +I+G HGH +A++LF ++ + P+ TF+
Sbjct: 649 AKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFL 708
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL AC HAG + G + G M+ +YG++PK+EHY C+VD+LGR G++ EA +L+ M
Sbjct: 709 GVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPD 768
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+PD +W +LL++C+N+G++E+ E V K+++ LEPN YV+LSN+YA
Sbjct: 769 EPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYA 817
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 3/342 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHTF 118
S G L A LF+ N WNT+I + + L M+R N+ T
Sbjct: 345 SKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTV 404
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
VL ACS L K+IH + + G D V N V Y+ S L+ A +VF +
Sbjct: 405 LNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEG 464
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+T++ W +I +AQ+ ++L LF M+ G +P+ T+ S+L ACA+ L G+++
Sbjct: 465 KTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEI 524
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H F+ G E+ +G +L+ +Y + ++ K +FD M +++ WN MI+G + +
Sbjct: 525 HGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELP 584
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EALD FR++ I P +I GVL AC + +G+++ + + E
Sbjct: 585 CEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCA- 643
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
++D+ +CG + +++ + R V + D +W ++A HG+
Sbjct: 644 LIDMYAKCGCMEQSQNIFDR-VNEKDEAVWNVIIAGYGIHGH 684
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 191/389 (49%), Gaps = 28/389 (7%)
Query: 26 KSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
K++H +++HA + S +++ D ++R++A S+ G S + +F++ + + F++N
Sbjct: 106 KNIHVGRKVHALVSASHKLRNDVVLSTRIIAM--YSACGSPSDSRGVFDAAKEKDLFLYN 163
Query: 85 TLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
L+ + + AI L++ + T AP+ T V KAC+ V + + +H K
Sbjct: 164 ALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALK 223
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+G D V N L+ Y + +A +VF+ +RNR L W +++ +++ E +
Sbjct: 224 AGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGV 283
Query: 204 FDQMLM---EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
F ++L+ EG P+ T+ +V+ ACA G + +G VH G + +LV M
Sbjct: 284 FKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDM 343
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP-NDIT 319
Y+K G L +A+ALFD +N+ +WN +I G + G +L +++++E+ V N++T
Sbjct: 344 YSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVT 403
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL---------GRCGKVL 370
+ VL AC G S+K ++G + +G + D L +C +
Sbjct: 404 VLNVLPAC-------SGEHQLLSLKEIHGYAFR---HGFLKDELVANAFVAAYAKCSSLD 453
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHG 399
AE + M K V W AL+ A +G
Sbjct: 454 CAERVFCGMEGKT-VSSWNALIGAHAQNG 481
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 157/303 (51%), Gaps = 7/303 (2%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQV 172
++ +L+AC + ++++ +++H VS S L D+ + ++ YS +++R V
Sbjct: 91 SKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGV 150
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGC 231
FD + + L ++ ++SGY+++ +A+ LF ++L P++ TL V ACA
Sbjct: 151 FDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVAD 210
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
+ELGE VH G A +G AL+ MY K G + A +F++M RN+ +WN+++
Sbjct: 211 VELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYA 270
Query: 292 LASHGHAEEALDLFRKL---EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
+ +G E +F++L E+E +VP+ T V V+ AC G + +G + G ++ G
Sbjct: 271 CSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKL-G 329
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
I ++ +VD+ +CG + EA L M +VV W ++ G+ ++
Sbjct: 330 ITEEVTVNNSLVDMYSKCGYLGEARALFD-MNGGKNVVSWNTIIWGYSKEGDFRGVFELL 388
Query: 409 KEI 411
+E+
Sbjct: 389 QEM 391
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 222 VLSACAQSGCLELGEKVHVFV----KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
+L AC + +G KVH V K+R +L T ++ MY+ G+ + ++ +FD+
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRN---DVVLSTRIIAMYSACGSPSDSRGVFDAA 154
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFIDVG 336
E+++ +NA++SG + + +A+ LF +L + P++ T V AC +++G
Sbjct: 155 KEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELG 214
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
+ + G ++ + G+CG V A ++ + M + ++V W +++ AC
Sbjct: 215 EAVHALALKAGGFSDAFVG-NALIAMYGKCGFVESAVKVFETMRNR-NLVSWNSVMYACS 272
Query: 397 NHGNIEVAERVVKEIIALE 415
+G V K ++ E
Sbjct: 273 ENGGFGECCGVFKRLLISE 291
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 260/494 (52%), Gaps = 57/494 (11%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P+ L+LL D KS H L QIHA ++ R H + +S G L ++ L
Sbjct: 20 PVDKDNLALLIDNSKSTHHLLQIHAALL--RRGLHHHPILNFKLQRSYASLGHLHHSVTL 77
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F+ +PN F+W +I A A A+ Y M PN T + +LKAC+ L
Sbjct: 78 FHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----L 133
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN--------- 182
+ + +H+H K GL L+V LV Y+ D+ +A+++FD + R+L
Sbjct: 134 HPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCY 193
Query: 183 ----------------------VWTTMISGYAQSFRANEALMLFDQMLME-------GFE 213
W MI GYAQ NEAL+ F +M+M
Sbjct: 194 AKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVR 253
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN +T+ +VLS+C Q G LE G+ VH +V+ G ++ +GTALV MY K G+L A+ +
Sbjct: 254 PNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKV 313
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
FD M +++ WN+MI G HG ++EAL LF ++ + P+DITFV VL+AC HAG +
Sbjct: 314 FDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLV 373
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
G ++F SMK YG+EPK+EHYGCMV+LLGR G++ EA +L++ M +PD V+WG LL
Sbjct: 374 SKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLW 433
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLAS 453
AC+ H N+ + E + + +++ + G YV+LSNMYA A + + G+A
Sbjct: 434 ACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARN-------------WVGVAK 480
Query: 454 AADILQNPDFESPP 467
+++ E P
Sbjct: 481 VRSMMKGSGVEKEP 494
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 248/473 (52%), Gaps = 51/473 (10%)
Query: 6 SSLRQPPLPIPPLSLLADK-------CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA 58
SS R P + L AD+ C S + ++HA + + QD RL A
Sbjct: 14 SSTRHPSGGVQHGVLTADRAAALLAGCASARRASELHAAAVRAGVDQDKAVDFRLQR--A 71
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHT 117
++SG L A L P + + I A +S A+ L M + G P HT
Sbjct: 72 YAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHT 131
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSK------------------------------SGLD 147
+ L AC L + +H + K G+
Sbjct: 132 LSASLPACGG---LAVGRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQ 188
Query: 148 LDLHVVN--CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D HVV+ ++ CY+ L++AR +FD + ++ L W M+ GY Q R +EAL LF
Sbjct: 189 PDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFR 248
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV---KMRGFEMGAILGTALVHMYT 262
+ML G EP+ V++ LSA AQ G E G +H FV R + A +GTAL+ MY
Sbjct: 249 RMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYY 308
Query: 263 KNGALAKAKALFDSMP--ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
K G+L A A+F + +R+I WNAM++G A HGH+ EAL F +L + + P DITF
Sbjct: 309 KCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITF 368
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+GVL+AC H+G +D GR++F SM YGIEPK+EHYGCMVDLLGR G+V EA EL++ M
Sbjct: 369 IGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMT 428
Query: 381 W-KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
KPD VMW +LLAAC+ H N+E+ +R+ ++A N G YV+LSNMYA A
Sbjct: 429 RTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAA 481
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 254/461 (55%), Gaps = 44/461 (9%)
Query: 12 PLPIPPLSLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSY 67
P + +SLL + C +++++ ++IH+ + D A+ L+ +C +S +
Sbjct: 256 PNAVTFVSLL-NSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNS---VQE 311
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKA----IF-LYMNMRRTGFAPNQHTFTFVL 122
A +F+ + + W+ +I A S DK +F L MRR G PN+ TF +L
Sbjct: 312 AREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSIL 371
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLH----VVNCLVRCYSV---------------- 162
+AC+ +L +QIH +SK G +LD + N +C S+
Sbjct: 372 RACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVV 431
Query: 163 -----------SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
DL++A +VF E+ R + W MI+GYAQ+ + L M EG
Sbjct: 432 AWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEG 491
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+P+ VT+ ++L AC LE G+ VH G E ++ T+L+ MY+K G +A+A+
Sbjct: 492 FQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEAR 551
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M R+ WNAM++G HG EA+DLF+++ KE++ PN+IT V+SAC AG
Sbjct: 552 TVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAG 611
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ GR+IF M+ + + P+ +HYGCMVDLLGR G++ EAEE I+ M +PD+ +W AL
Sbjct: 612 LVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHAL 671
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L ACK+H N+++AER I+ LEP+ VY+ LSN+YA+A
Sbjct: 672 LGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQA 712
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 207/393 (52%), Gaps = 9/393 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
K + K +H Q+ D + + L+ F S D++ A ++F + + W
Sbjct: 68 KARRFEDGKMVHKQLDELGVEIDIYLGNSLINF--YSKFEDVASAEQVFRRMTLRDVVTW 125
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+++I A A + +P KA + M PN+ TF +LKAC+N L ++IHT V
Sbjct: 126 SSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKA 185
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
G++ D+ V L+ YS +++ A +VF ++ R + WT +I AQ + NEA L
Sbjct: 186 MGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFEL 245
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
++QML G PN+VT S+L++C L G ++H + RG E I+ AL+ MY K
Sbjct: 246 YEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCK 305
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHA-----EEALDLFRKLEKEQIVPNDI 318
++ +A+ +FD M +R++ +W+AMI+G A G+ +E L ++ +E + PN +
Sbjct: 306 CNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKV 365
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TF+ +L AC G ++ GRQI + +V G E + ++ +CG + EAE++ +
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQVFSK 424
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
M K +VV W + L+ G++ AE+V E+
Sbjct: 425 MANK-NVVAWTSFLSMYIKCGDLSSAEKVFSEM 456
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 161/302 (53%), Gaps = 2/302 (0%)
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
+AI L +++ G N +T+ V++ C+ R K +H + + G+++D+++ N L+
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
YS D+ +A QVF + R + W++MI+ YA + +A F++M EPN +
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T S+L AC LE G K+H VK G E + TAL+ MY+K G ++ A +F M
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
ERN+ +W A+I A H EA +L+ ++ + I PN +TFV +L++C ++ GR
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
+I + G+E + ++ + +C V EA E+ RM K DV+ W A++A
Sbjct: 279 RIHSHISE-RGLETDMIVANALITMYCKCNSVQEAREIFDRMS-KRDVISWSAMIAGYAQ 336
Query: 398 HG 399
G
Sbjct: 337 SG 338
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 122/237 (51%), Gaps = 9/237 (3%)
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
VW +G R EA+ L + G NS T V+ CA++ E G+ VH +
Sbjct: 28 VWRLCKAG-----RLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQL 82
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G E+ LG +L++ Y+K +A A+ +F M R++ TW++MI+ A + H +A
Sbjct: 83 DELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAF 142
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
D F ++ I PN ITF+ +L AC + ++ GR+I ++ + G+E + ++ +
Sbjct: 143 DTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH-TIVKAMGMETDVAVATALITM 201
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
+CG++ A E+ +M + +VV W A++ A H + A + ++++ + PN
Sbjct: 202 YSKCGEISVACEVFHKMTER-NVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPN 257
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/439 (36%), Positives = 248/439 (56%), Gaps = 40/439 (9%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA-- 89
+Q HAQ+++ + F A++++A A SSGDL A +F+ I +P+ ++N++IRA
Sbjct: 97 QQAHAQIVLHGLQPNAFLAAKMVAMYA--SSGDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154
Query: 90 -QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+ Y M G + T FVLK+C+++ + + +H + GL+
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG 214
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEI-------------------------------R 177
D +V L+ Y + +AR++FD++
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME 274
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE--PNSVTLASVLSACAQSGCLELG 235
+R + WT MISGY Q+ A +AL LFD+ML +G E PN VT+ SVL ACAQS LE G
Sbjct: 275 HRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG 334
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE--RNIATWNAMISGLA 293
++H F G + + + TAL MY K +L +A+ FD + + +N+ WN MI+ A
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
SHG EA+ +F + + + P+ +TF+G+LS C H+G ID G F M ++ +EP++
Sbjct: 395 SHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRV 454
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHY C+VDLLGR G+++EA+ELI +M + +WGALLAAC++H N+E+AE + +
Sbjct: 455 EHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFV 514
Query: 414 LEPNNHGVYVVLSNMYAEA 432
LEP+N G YV+LSN+YAEA
Sbjct: 515 LEPDNSGNYVLLSNLYAEA 533
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 38/324 (11%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P+ ++ + + + + +Q H + GL + + +V Y+ S DL++A V
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 173 FDEIRNRTLNVWTTMISGYAQ---SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
FD I N + ++ ++I Y + L + +M G ++ TL VL +CA
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
+ +G VH G E +G +L+ MY K G + A+ LFD M R++A+WNA+I
Sbjct: 195 SRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALI 254
Query: 290 SGLASHGHAEEALDLFRKLEKEQIV---------------------------------PN 316
+G G A DLF ++E IV PN
Sbjct: 255 AGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPN 314
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+T V VL AC + ++ GR+I + G+ + + +C ++EA
Sbjct: 315 WVTIVSVLPACAQSAALERGRRIHDFANGI-GLHLNSSVQTALAGMYAKCYSLVEARCCF 373
Query: 377 KRMVWK-PDVVMWGALLAACKNHG 399
+ +++ W ++ A +HG
Sbjct: 374 DMIAQNGKNLIAWNTMITAYASHG 397
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 12/291 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + +++ +MI+ +D + + L+A G++ A LF ++ N W
Sbjct: 228 KCGVIGDARKLFDKMIV----RDMASWNALIA--GYMKEGEIGVAEDLFERMEHRNIVSW 281
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
+I + ++A+ L+ M + G PN T VL AC+ +L ++IH
Sbjct: 282 TAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFA 341
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI--RNRTLNVWTTMISGYAQSFRANE 199
+ GL L+ V L Y+ L AR FD I + L W TMI+ YA E
Sbjct: 342 NGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVE 401
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKMRGFEMGAILGTALV 258
A+ +F+ ML G +P++VT +LS C+ SG ++ G + + E +V
Sbjct: 402 AVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVV 461
Query: 259 HMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKL 308
+ + G L +AK L MP + + W A+++ SH + E A R+L
Sbjct: 462 DLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRL 512
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 6/217 (2%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
N L + Q +++ F P+ + A + + ++LG++ H + + G + A L +
Sbjct: 60 NLQLRILLQPILQHF-PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKM 118
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA---LDLFRKLEKEQIV 314
V MY +G L A +FD + + +N++I HG L+ + ++ ++
Sbjct: 119 VAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLL 178
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
++ T VL +C + +GR + G RV G+E ++D+ +CG + +A +
Sbjct: 179 GDNFTLPFVLKSCADLSRVCMGRCVHGQGLRV-GLEGDFYVGASLIDMYVKCGVIGDARK 237
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
L +M+ + D+ W AL+A G I VAE + + +
Sbjct: 238 LFDKMIVR-DMASWNALIAGYMKEGEIGVAEDLFERM 273
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 230/399 (57%), Gaps = 2/399 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
++IHAQ + F A+ L + G L Y LF + + W T+I
Sbjct: 237 REIHAQAMKKGFDVSSFVANTLATM--YNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLV 294
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ ++ MR + +PN++TF V+ C+N+ + +Q+H + GL L
Sbjct: 295 QMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLS 354
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N ++ Y+ L ++ +F E+ R + W+T+I+GY+Q +EA L M MEG
Sbjct: 355 VENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEG 414
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P LASVLSAC LE G+++H +V G E A++ +AL++MY K G++ +A
Sbjct: 415 PKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD+ +I +W AMI+G A HG++ E +DLF K+ + + P+ +TF+GVLSAC HAG
Sbjct: 475 RIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAG 534
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+G + F +M + Y I P EHYGCM+DLL R G++ +AE +I+ M + D V+W L
Sbjct: 535 LVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTL 594
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L AC+ HG++E R + I+ LEPN G ++ L+N+YA
Sbjct: 595 LRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYA 633
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 3/347 (0%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHT 117
L +G L A R+F+ + + W TLI ++ + +A+ L+ NMR +G +
Sbjct: 59 LVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFI 118
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ KAC +N + +H + K+GL + V + L+ Y+ + + R+VF E+
Sbjct: 119 LSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP 178
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R + WT +I+G ++ EAL+ F +M E +S T A L ACA SG L G +
Sbjct: 179 MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGRE 238
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +GF++ + + L MY K G L LF+ M R++ +W +I+ L G
Sbjct: 239 IHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQ 298
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E A+ F ++ + + PN+ TF V+S C + I+ G Q+ + + G+ +
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHL-GLAASLSVEN 357
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++ + +CG++ + + M + D+V W ++A G++ A
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAGYSQGGHVSEA 403
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 182/397 (45%), Gaps = 10/397 (2%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H + + + F S LL + +G + R+F+ + N W +I +
Sbjct: 138 LHGYAVKTGLVNSVFVGSALLDM--YTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRA 195
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+A+ + M R+ + +TF LKAC++ +LN ++IH K G D+ V
Sbjct: 196 GYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVA 255
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L Y+ L +F+++ R + WTT+I+ Q + A+ F +M
Sbjct: 256 NTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVS 315
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN T A+V+S CA +E GE++H + G + +++ MY K G L + +
Sbjct: 316 PNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVI 375
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F M R+I +W+ +I+G + GH EA +L + E P + VLSAC + +
Sbjct: 376 FHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAIL 435
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
+ G+Q+ + + G+E ++++ +CG + EA + D+V W A++
Sbjct: 436 EHGKQLHAYVLSI-GLEHTAMVLSALINMYCKCGSIEEASRIFD-AAENDDIVSWTAMIN 493
Query: 394 ACKNHGN----IEVAERVVKEIIALEPNNHGVYVVLS 426
HG I++ E++ + + L P++ VLS
Sbjct: 494 GYAEHGYSREVIDLFEKIPR--VGLRPDSVTFIGVLS 528
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 246/407 (60%), Gaps = 8/407 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
++H ++ + QD F A++L+ S G + YA ++F+ + ++WN L RA
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC----SNVRSLNCCKQIHTHVSKSGLDL 148
+ + ++ + LY M R G ++ T+T+VLKAC L K+IH H+++ G +
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNS 215
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++++ LV Y+ ++ A VF+ + R + W+ MI+ YA++ +A EAL F +M+
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 209 MEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
E + PNSVT+ SVL ACA LE G +H ++ RG + + +ALV MY + G
Sbjct: 276 TETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L + +FD M +R++ +WN++IS HG+ +A+ +F ++ P +TFV VL A
Sbjct: 336 LDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G ++ G+++F SM R +GI+P++EHY CMVDLLGR ++ EA ++++ M +P
Sbjct: 396 CSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+WG+LL +C+ HGN+E+AER + + ALEP N G YV+L+++YAEA+
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQ 502
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 161/308 (52%), Gaps = 8/308 (2%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
+P+Q T+ ++ C + SL+ ++H H+ +G D D + L+ YS ++ AR+
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFD+ R RT+ VW + + E L L+ +M G E + T VL AC S C
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 232 ----LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
L G+++H + RG+ + T LV MY + G + A +F+ MP RN+ +W+A
Sbjct: 194 TADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSA 253
Query: 288 MISGLASHGHAEEALDLFRKL--EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
MI+ A +G A EAL FR++ E + PN +T V VL AC ++ GR I G + R
Sbjct: 254 MIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILR 313
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
G++ + +V + GRCGK+ + + RM DVV W +L+++ HG A
Sbjct: 314 -RGLDSILPVISALVTMYGRCGKLDVGQRVFDRM-HDRDVVSWNSLISSYGVHGYGRKAI 371
Query: 406 RVVKEIIA 413
++ +E++A
Sbjct: 372 QIFEEMLA 379
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 6/211 (2%)
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
++L + P+ T ++ C L G +VH + G + L T L+ MY+ G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
++ A+ +FD +R I WNA+ L GH EE L L+ K+ + + + T+ VL
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 326 AC----CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
AC C A + G++I + R G + +VD+ R G V A + M
Sbjct: 187 ACVASECTADHLTKGKEIHAHLTR-RGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPV 245
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ +VV W A++A +G A R +E++
Sbjct: 246 R-NVVSWSAMIACYAKNGKAFEALRTFREMM 275
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 222/370 (60%), Gaps = 6/370 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSL-NPDKAIFLYMNMRRTGFAPNQHTFTFV 121
G L A R+F+ + N W T++ A AS+ +A+ + MRR G APN +TF+ V
Sbjct: 118 GLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSV 177
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC+ L +H K+GLD D+ V + L+ Y DL+ R+VFDE+ R L
Sbjct: 178 LGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDL 234
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
VW ++I+G+AQS A+ LF +M GF N TL SVL AC LE G +VH
Sbjct: 235 VVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAH 294
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
V ++ IL AL+ MY K G+L A ALF MP+R++ +W+ M+SGLA +G + EA
Sbjct: 295 VLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEA 352
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L +F ++ + + PN +T VGVL AC HAG ++ G F SMKR++GI+P+ EH+ CMVD
Sbjct: 353 LRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVD 412
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LLGR GK+ EA E I M +PD V+W LL AC+ H N +A +EI+ LEP++ G
Sbjct: 413 LLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGA 472
Query: 422 YVVLSNMYAE 431
V+LSN YA+
Sbjct: 473 RVLLSNTYAD 482
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 243/460 (52%), Gaps = 40/460 (8%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMI----ISSRIQDHFAASRLLAFCALSSSGD 64
R + L KC S+ +LKQIH + + + S+ Q H A L + L S D
Sbjct: 248 RNAHMNTQTFYFLLQKCGSLEKLKQIHGKAVTLGLLCSKRQ-HLACKLLNTYTQLGSPVD 306
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
A ++FN IQ+P+ W LI + P KA ++ ++ +G P+ + A
Sbjct: 307 ---AQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSA 363
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS--------------------- 163
C + + L+ + +H V + L D V N L+ YS S
Sbjct: 364 CGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSW 423
Query: 164 ----------SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
+D+ AR++FDE+ R WT MI+GY Q L LF +M EG +
Sbjct: 424 TSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKD 483
Query: 214 -PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
P +T+ +VLS CA G +LG VH +V ++ + AL+ MY K+GAL A
Sbjct: 484 WPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALK 543
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F MP+R++ +W MISGLA HG AL+ F + K PN++T + VLSAC HAG
Sbjct: 544 IFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGL 603
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ GR +F M + +GI+PKI+HYGCMVDLLGR G + EA+ELI+ M KPD V+W +LL
Sbjct: 604 VVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLL 663
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+AC HGN+ +AE K II LEP++ GVY++L N+Y A
Sbjct: 664 SACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSA 703
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 177/501 (35%), Positives = 264/501 (52%), Gaps = 77/501 (15%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CKS LK+IHAQ+II+ +I+D F A++ + A+S+ ++ YA +F I P+ + W
Sbjct: 37 CKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSAR-NIDYAFWVFVGINYPDSYSWT 95
Query: 85 TLIRAQASSLNPD-----------------KAIFLYMNMRRTGFAPNQHTFTFV------ 121
T+IR + NP+ K FL++ ++ G P+ V
Sbjct: 96 TMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFV-LKAYGLRPSYQEGRIVHGKLVK 154
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV---------------------------- 153
+ C +V + N IH ++ K G D H++
Sbjct: 155 VGFCYDVFTRNAL--IHMYL-KCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERA 211
Query: 154 ---------------NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
N +V YS ++ AR +FD + R + W +MIS Y Q+ RA
Sbjct: 212 RRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAA 271
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LF +M++ G +S+ + S+LSACAQ G L++G +H ++K L TALV
Sbjct: 272 EALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALV 331
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY K G + A +F++MP +N+ +WNAM+SGLA HGH AL+LF+++E + PNDI
Sbjct: 332 DMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDI 391
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TFV VLSAC H G ++ G + F M + + I PK+EHYGCMVD+L R G + EA+E+I+
Sbjct: 392 TFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRT 451
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EA 432
M +P+VV+WGALL ACK HG V E VV I L + G YV+LSN++A E
Sbjct: 452 MPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEV 511
Query: 433 ESMKMQLEILLVQVLFAGLAS 453
E + ++ + V+ G +S
Sbjct: 512 EKTRKMMKQMGVEKKIPGYSS 532
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 19/316 (6%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS-DLNNARQVFDEIRNRT 180
L++C + L K+IH + +G D + V Y+VS+ +++ A VF I
Sbjct: 34 LQSCKSTEDL---KKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPD 90
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
WTTMI G+ ++ +AL + M G E N T VL A + G VH
Sbjct: 91 SYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHG 150
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+ GF AL+HMY K G++ A LFD MP N+ TWN MI+G G E
Sbjct: 151 KLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTER 210
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
A LF ++ + + ++ V+ G +D+ R +F M E + +G M+
Sbjct: 211 ARRLFGEMPERNVG----SWNAVVGGYSKLGHVDIARSLFDLMP-----ERDVVSWGSMI 261
Query: 361 DLLGRCGKVLEAEELIKRMVW---KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
+ G+ EA EL K M+ D ++ ++L+AC G +++ R + +
Sbjct: 262 SAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMG-RWIHAYMKRSKL 320
Query: 418 NHGVYV--VLSNMYAE 431
+ V++ L +MYA+
Sbjct: 321 RNDVFLDTALVDMYAK 336
>gi|388518129|gb|AFK47126.1| unknown [Medicago truncatula]
Length = 447
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 223/364 (61%), Gaps = 4/364 (1%)
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
TR S +P F WN +IR+ +P A+ +Y++M R G P+++T VLKA S
Sbjct: 53 TRFLES--NPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQS 110
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
++ +Q+H++ K GL + + + + Y + D ++A +VFDE L W +I
Sbjct: 111 FAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALI 170
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGF 247
SG +Q A +A+++F M GFEP+ +T+ SV+ AC G L L ++H +V + +
Sbjct: 171 SGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMCACGSIGDLYLALQLHKYVFQAKTN 230
Query: 248 EMGAIL-GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
E IL +L+ MY K G + A +F +M +RN+++W +MI G A HGHA+EAL F
Sbjct: 231 EWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFH 290
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+ + + PN +TF+GVLSAC H G + GR F MK +YGI P+++HYGCMVDLLGR
Sbjct: 291 CMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRA 350
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
G +A +++ M KP+ V+WG L+ AC+ HGN+++AE V + + ALEP N GVYVVLS
Sbjct: 351 GLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLS 410
Query: 427 NMYA 430
N+YA
Sbjct: 411 NIYA 414
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 8/275 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+H+ I + + S + +C +GD A ++F+ P WN LI
Sbjct: 117 QQVHSYGIKLGLQSNEYCESGFINLYC---KAGDFDSAHKVFDENHEPKLGSWNALISGL 173
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV--SKSGLDL 148
+ AI ++++M+R GF P+ T V+ AC ++ L Q+H +V +K+
Sbjct: 174 SQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMCACGSIGDLYLALQLHKYVFQAKTNEWT 233
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ + N L+ Y ++ A +VF + +R ++ WT+MI GYA A EAL F M
Sbjct: 234 VILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMR 293
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK-MRGFEMGAILGTALVHMYTKNGAL 267
G +PN VT VLSAC G ++ G +K + G +V + + G
Sbjct: 294 ESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLF 353
Query: 268 AKAKALFDSMPER-NIATWNAMISGLASHGHAEEA 301
A+ + + MP + N W ++ HG+ + A
Sbjct: 354 DDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMA 388
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 225/374 (60%), Gaps = 1/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ GD+S A +F+ + N W LI A D A+ L M++ APN+ TF
Sbjct: 194 AKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFA 253
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L+ C+ +L K++H ++ +SG +L VVN L+ Y L AR++F ++ +R
Sbjct: 254 SILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHR 313
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ WT M++GYAQ +EA+ LF +M +G +P+ +T SVL++C+ L+ G+++H
Sbjct: 314 DVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIH 373
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL-ASHGHA 298
+ G+ + L +ALV MY K G++ A +F+ M ERN+ W A+I+G A HG
Sbjct: 374 QQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRC 433
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EAL+ F +++K+ I P+ +TF VLSAC H G ++ GR+ F SM YGI+P +EHY C
Sbjct: 434 REALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSC 493
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
VDLLGR G + EAE +I M + P +WGALL+AC+ H ++E ER + ++ L+P++
Sbjct: 494 FVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDD 553
Query: 419 HGVYVVLSNMYAEA 432
G YV LS++YA A
Sbjct: 554 DGAYVALSSIYAAA 567
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 203/382 (53%), Gaps = 5/382 (1%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+ +S+ Q +++HA ++ S + + + LL+ A G L+ A R+F+SI+ N W
Sbjct: 59 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYA--KCGSLTDARRVFDSIRDRNIVSW 116
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+I A + +A Y M+ G P++ TF +L A +N L +++H + +
Sbjct: 117 TAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVE 176
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+GL+L+ V LV Y+ D++ AR +FD + + + WT +I+GYAQ + + AL L
Sbjct: 177 AGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALEL 236
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
+ M PN +T AS+L C LE G+KVH ++ G+ + +L+ MY K
Sbjct: 237 LETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCK 296
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G L +A+ LF +P R++ TW AM++G A G +EA++LFR+++++ I P+ +TF V
Sbjct: 297 CGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSV 356
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L++C F+ G++I + G + +V + +CG + +A + +M +
Sbjct: 357 LTSCSSPAFLQEGKRIHQQLVHA-GYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER- 414
Query: 384 DVVMWGALLAA-CKNHGNIEVA 404
+VV W A++ C HG A
Sbjct: 415 NVVAWTAIITGCCAQHGRCREA 436
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 158/276 (57%), Gaps = 4/276 (1%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F +L+ C+ +RSL +++H + KSG+ + ++ N L+ Y+ L +AR+VFD IR
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+R + WT MI + + EA ++ M + G +P+ VT S+L+A L+LG+K
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH+ + G E+ +GT+LV MY K G ++KA+ +FD +PE+N+ TW +I+G A G
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHY 356
+ AL+L +++ ++ PN ITF +L C ++ G+++ ++ YG E +
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWV--V 287
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ + +CG + EA +L + + DVV W A++
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHR-DVVTWTAMV 322
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
+S ++ R EAL + + M+++G S +L CA+ LE G +VH + G
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ L L+ MY K G+L A+ +FDS+ +RNI +W AMI + EA +
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV-YGIEPKIEHYGCMVDLLGRC 366
++ P+ +TFV +L+A + + +G+++ + +EP++ +V + +C
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKC 196
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
G + +A + R+ K +VV W L+A G ++VA
Sbjct: 197 GDISKARVIFDRLPEK-NVVTWTLLIAGYAQQGQVDVA 233
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 228/399 (57%), Gaps = 2/399 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
++IHAQ + F A+ L + G L Y LF + + W T+I
Sbjct: 237 REIHAQAMKKGFDVSSFVANTLATM--YNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLV 294
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ ++ MR + +PN++TF V+ C+N+ + +Q+H + GL L
Sbjct: 295 QMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLS 354
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N ++ Y+ L ++ +F E+ R + W+T+I+GY Q +EA L M MEG
Sbjct: 355 VENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEG 414
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P LASVLSAC LE G+++H +V G E A++ +AL++MY K G++ +A
Sbjct: 415 PKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD+ +I +W AMI+G A HG++ E +DLF K+ + + P+ +TF+GVLSAC HAG
Sbjct: 475 RIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAG 534
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+G F +M + Y I P EHYGCM+DLL R G++ +AE +I+ M + D V+W L
Sbjct: 535 LVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTL 594
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L AC+ HG++E R + I+ LEPN G ++ L+N+YA
Sbjct: 595 LRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYA 633
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 3/347 (0%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHT 117
L +G L A R+F+ + + W TLI ++ + +A+ L+ NMR +G +
Sbjct: 59 LVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFI 118
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ KAC +N + +H + K+GL + V + L+ Y+ + + R+VF E+
Sbjct: 119 LSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP 178
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R + WT +I+G ++ EAL+ F +M E +S T A L ACA SG L G +
Sbjct: 179 MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGRE 238
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +GF++ + + L MY K G L LF+ M R++ +W +I+ L G
Sbjct: 239 IHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQ 298
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E A+ F ++ + + PN+ TF V+S C + I+ G Q+ + + G+ +
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHL-GLAASLSVEN 357
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++ + +CG++ + + M + D+V W ++A G++ A
Sbjct: 358 SIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAGYXQGGHVSEA 403
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 181/397 (45%), Gaps = 10/397 (2%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H + + + F S LL + +G + R+F+ + N W +I +
Sbjct: 138 LHGYAVKTGLVNSVFVGSALLDM--YTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRA 195
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+A+ + M R+ + +TF LKAC++ +LN ++IH K G D+ V
Sbjct: 196 GYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVA 255
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L Y+ L +F+++ R + WTT+I+ Q + A+ F +M
Sbjct: 256 NTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVS 315
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN T A+V+S CA +E GE++H + G + +++ MY K G L + +
Sbjct: 316 PNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVI 375
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F M R+I +W+ +I+G GH EA +L + E P + VLSAC + +
Sbjct: 376 FHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAIL 435
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
+ G+Q+ + + G+E ++++ +CG + EA + D+V W A++
Sbjct: 436 EHGKQLHAYVLSI-GLEHTAMVLSALINMYCKCGSIEEASRIFD-AAENDDIVSWTAMIN 493
Query: 394 ACKNHGN----IEVAERVVKEIIALEPNNHGVYVVLS 426
HG I++ E++ + + L P++ VLS
Sbjct: 494 GYAEHGYSREVIDLFEKIPR--VGLRPDSVTFIGVLS 528
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 253/445 (56%), Gaps = 35/445 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQ 76
+SLL K+ ++ IH I + QD F A LL +C ++ + +A +LF Q
Sbjct: 30 ISLLHKNRKNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNY---IDHAIKLFRCTQ 86
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+PN +++ +LI S + AI L+ M R + + T +LKAC R+L K+
Sbjct: 87 NPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKE 146
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD---------------------- 174
+H V KSGL LD + LV Y L +AR++FD
Sbjct: 147 VHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGM 206
Query: 175 ---------EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
E+ R WT +I G ++ N L +F +M ++G EPN VT VLSA
Sbjct: 207 VEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSA 266
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CAQ G LELG +H +++ G E+ + AL++MY++ G + +A+ALFD + ++++T+
Sbjct: 267 CAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTY 326
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
N+MI GLA HG + EA++LF ++ KE++ PN ITFVGVL+AC H G +D+G +IF SM+
Sbjct: 327 NSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEM 386
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
++GIEP++EHYGCMVD+LGR G++ EA + I RM + D M +LL+ACK H NI + E
Sbjct: 387 IHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGE 446
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYA 430
+V K + + G +++LSN YA
Sbjct: 447 KVAKLLSEHYRIDSGSFIMLSNFYA 471
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 165/418 (39%), Positives = 250/418 (59%), Gaps = 16/418 (3%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLA----FCALSSSGDLSYATRLFNSIQSPN 79
+ +SM + Q+H Q++ H ASR L+ F ALS GDL+YA L ++ + N
Sbjct: 2 EVRSMWEALQVHGQVVKLG--MGHKDASRKLSKVFTFAALSPFGDLNYARLLLSTNPTLN 59
Query: 80 HFMWNTLIRAQASS---LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+ +NTL+RA + + P A+ L+++M P+ TF F+LK CS + KQ
Sbjct: 60 SYYYNTLLRAFSQTPLPTPPFHALSLFLSMPS---PPDNFTFPFLLKCCSRSKLPPLGKQ 116
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H ++K G DL++ N L+ YS DL AR +FD + +R + WT+MI G
Sbjct: 117 LHALLTKLGFAPDLYIQNVLLHMYSEFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDL 176
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI--LG 254
EA+ LF++ML G E N T+ SVL ACA SG L +G KVH ++ G E+ + +
Sbjct: 177 PVEAINLFERMLQCGVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVS 236
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
TALV MY K G +A A+ +FD + R++ W AMISGLASHG ++A+D+F +E +
Sbjct: 237 TALVDMYAKGGCIASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVK 296
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P++ T VL+AC +AG I G +F ++R YG++P I+H+GC+VDLL R G++ EAE+
Sbjct: 297 PDERTVTAVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAED 356
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPNNHGVYVVLSNMYA 430
+ M +PD V+W L+ ACK HG+ + AER++K EI + ++ G Y++ SN+YA
Sbjct: 357 FVNAMPIEPDTVLWRTLIWACKVHGDADRAERLMKHLEIQDMRADDSGSYILASNVYA 414
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 159/405 (39%), Positives = 229/405 (56%), Gaps = 31/405 (7%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +LF+ + + W+ LI + ++AI ++ M + G ++ L AC+N
Sbjct: 329 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT- 186
+ +N K IH+ K G + +++ N L+ YS D+ AR++FDE L W +
Sbjct: 389 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSM 448
Query: 187 ------------------------------MISGYAQSFRANEALMLFDQMLMEGFEPNS 216
MISGYAQ+ +E L LF +M M GF+P+
Sbjct: 449 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDE 508
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
TL SV+SACA+ LE G+ VH ++K G + ILGT L+ MY K G + A +F
Sbjct: 509 TTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYG 568
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
M E+ I+TWNA+I GLA +G E +LD+F ++K + PN+ITF+GVL AC H G +D G
Sbjct: 569 MIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG 628
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
+ F SM + I+P ++HYGCMVDLLGR GK+ EAEEL+ RM PDV WGALL ACK
Sbjct: 629 QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACK 688
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
HG+ E+ RV +++I L+P++ G +V+LSN+YA LEI
Sbjct: 689 KHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEI 733
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 176/408 (43%), Gaps = 95/408 (23%)
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
RA + +P A LY +M + +T+ +++ACS RS KQ+H HV K G D
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ-------------- 193
D++V N L+ C+SV S++ +A +VF+E W ++++GY +
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 194 ---SFRAN--------------EALMLFDQMLME-------------------------- 210
S A+ EA LFD+ML +
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 211 GFEPNSVTLASVLSACAQSGC-----LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
G V + V++ A S C + +G+ +H G E L AL++MY+K G
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 425
Query: 266 ALA-------------------------------KAKALFDSMPERNIATWNAMISGLAS 294
+ AKA+FDSMPE+++ +W++MISG A
Sbjct: 426 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQ 485
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
+ +E L LF++++ P++ T V V+SAC ++ G+ + +KR G+ +
Sbjct: 486 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR-NGLTINVI 544
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
++D+ +CG V A E+ M+ K + W AL+ +G +E
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGMIEK-GISTWNALILGLAMNGLVE 591
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 271/530 (51%), Gaps = 101/530 (19%)
Query: 3 LKCSSLRQP-PLPIPP-----LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAF 56
L+ S R P PL PP LSL + CK++ LKQ+HAQ II+ ++
Sbjct: 79 LQSSMSRTPNPLTNPPSNPQILSLF-NPCKTLRHLKQVHAQ-IITHHNSPFQLSALASLS 136
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
L+YA +F+ +Q+P ++N+LIRA +SS P +A+ LY M ++G P+
Sbjct: 137 ALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHM 196
Query: 117 TFTFVLKAC-----------------------------------SNVRSLNCCKQI---- 137
T+ FV+KAC +N + L KQ+
Sbjct: 197 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 256
Query: 138 -----------------HTHVSKSGLDLDLHVV------NCLVRCYSVSSDLNNARQVFD 174
H + + + D V N ++ Y++ ++ A+++FD
Sbjct: 257 SARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFD 316
Query: 175 EIRNRTLNVWTTMISG-------------------------------YAQSFRANEALML 203
E+ R L W +M++G YAQ + NEAL L
Sbjct: 317 EMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 376
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
FDQM G +P T+ S+LSACA G L+ G +H ++ E+ +I+GTALV MY K
Sbjct: 377 FDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAK 436
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G ++ A +F++M +++ WN +I+G+A HG+ +EA LF+++++ + PNDITFV +
Sbjct: 437 CGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAI 496
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC HAG +D G+++ M YGIEPK+EHYGC++DLL R G + EA ELI M +P
Sbjct: 497 LSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEP 556
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ GALL C+ HGN E+ E V K +I L+P + G Y++LSN+YA A+
Sbjct: 557 NPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAK 606
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 240/418 (57%), Gaps = 2/418 (0%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
PL L C QL QIHA +I +S IQD + R L A + DL Y+ RLF+ +
Sbjct: 29 PLISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLT 88
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+P +N ++RA + S +P + +++Y +M R G + + +F +K+C + SL Q
Sbjct: 89 NPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQ 148
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
IH + +G D ++ ++ YS A ++FDE+ + + W +IS ++ R
Sbjct: 149 IHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKR 208
Query: 197 ANEALMLFDQMLMEGF--EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+AL LF+ M + +P+ VT +L ACA LE GE++H +++ G+ + L
Sbjct: 209 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLC 268
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+L+ MY++ G + KA +FD M E+N+ +W+AMISGL+ +GH EA++ F +++K +
Sbjct: 269 NSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVE 328
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P D TF VLSAC H G +D G F M++ + I P + HYGC+VDLLGR G + +A E
Sbjct: 329 PGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYE 388
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LI M +PD MW LL AC+ HG+ + ER+V+ +I L+ G YV+L N+Y+ A
Sbjct: 389 LIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSA 446
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 238/423 (56%), Gaps = 24/423 (5%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH + + + D F + L+ S G L A LF+ + + W+T+IRA
Sbjct: 129 KEIHGFSVKNGLVSDVFVVNALMQM--YSECGSLVSARLLFDKMSERDVVSWSTMIRAYI 186
Query: 92 SSL----------------------NPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+ + ++ L++ M PN T ++ +C V
Sbjct: 187 TLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVG 246
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
++ K++H ++ ++G + L + LV Y ++ +AR +FD ++N+ + WT MIS
Sbjct: 247 AVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMIS 306
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
YAQ+ + A LF QM G PN +T+ S+LS CA +G L++G+ H ++ +G E+
Sbjct: 307 AYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEV 366
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
IL TAL+ MY K G ++ A+ LF +R+I TWN M++G HG+ E+AL LF ++E
Sbjct: 367 DVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEME 426
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ PNDITF+G L AC HAG + G+ +F M +G+ PK+EHYGCMVDLLGR G +
Sbjct: 427 TLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLL 486
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EA ++I+ M P++ +WGA+LAACK H N + E +E++ALEP N G V++SN+Y
Sbjct: 487 DEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIY 546
Query: 430 AEA 432
A A
Sbjct: 547 AAA 549
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 26/348 (7%)
Query: 95 NPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
+P A+ Y MR+ + VLKACS + K+IH K+GL D+ VVN
Sbjct: 89 HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148
Query: 155 CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF------------------- 195
L++ YS L +AR +FD++ R + W+TMI Y F
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208
Query: 196 RAN---EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
R N E LF +M+ E PN +T+ S++ +C G ++LG+++H ++ GF M
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
L TALV MY K G + A+A+FDSM +++ TW AMIS A + A LF ++
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNG 328
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ PN++T V +LS C G +D+G+ + + G+E + ++D+ +CG + A
Sbjct: 329 VRPNELTMVSLLSLCAVNGALDMGKWFHAYIDK-QGVEVDVILKTALIDMYAKCGDISGA 387
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNN 418
+ L + + D+ W ++A HG E A ++ E+ + ++PN+
Sbjct: 388 QRLFSEAIDR-DICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPND 434
>gi|357517875|ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523248|gb|AET03702.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 510
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 248/415 (59%), Gaps = 5/415 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK++ ++KQ HAQ+II QD F A++L+ + ++ +A ++F+ + + F WN
Sbjct: 30 CKTIDRIKQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWN 89
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I+ A+ +A+ +Y MR +G APN++T+ FVLKAC R + IH +V K
Sbjct: 90 NVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKC 149
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GL+ DL V N V Y+ ++ +R+VFDE+ R + W +M+SGY + +EA+MLF
Sbjct: 150 GLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLF 209
Query: 205 DQMLME---GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
ML + GF P++ TL +VL A A+ + G +H ++ G ++ +G L+ +Y
Sbjct: 210 CDMLRDDGIGF-PDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLY 268
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+ G + AKA+FD +P+RN+ W+A+I HG A+EAL +FR+L + + + I F+
Sbjct: 269 SNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFL 328
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
+LSAC HAG + G +F +M+ YG+ HY CMVDLLGR G + +A ELI+ M
Sbjct: 329 SLLSACSHAGMHEEGWHLFQTME-TYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPI 387
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+P ++GALL A + H NIE+AE +++ L+PNN G YV+L+ MY + K
Sbjct: 388 QPGKNVYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYEDEGRWK 442
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 237/423 (56%), Gaps = 19/423 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC +++ LKQ+HAQM+ + + S LL SS +YA +FN I +P F++
Sbjct: 14 KCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLN---TSSKFASTYAFTIFNHIPNPTLFLY 70
Query: 84 NTLIRAQASSLNPDKAIFLYMN--MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
NTLI + + F N + PN TF + KAC++ L +H HV
Sbjct: 71 NTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHV 130
Query: 142 SKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR---- 196
K D V N L+ Y+ L +R +FD+I L W TM++ YAQS
Sbjct: 131 LKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSY 190
Query: 197 ---------ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
+ EAL LF M + +PN VTL +++SAC+ G L G H +V
Sbjct: 191 STSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNL 250
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
++ +GTALV MY+K G L A LFD + +R+ +NAMI G A HGH +AL+L+R
Sbjct: 251 KLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRN 310
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
++ E +VP+ T V + AC H G ++ G +IF SMK V+G+EPK+EHYGC++DLLGR G
Sbjct: 311 MKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAG 370
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
++ EAEE ++ M KP+ ++W +LL A K HGN+E+ E +K +I LEP G YV+LSN
Sbjct: 371 RLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSN 430
Query: 428 MYA 430
MYA
Sbjct: 431 MYA 433
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 254/446 (56%), Gaps = 34/446 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L+ +C +M +LKQIHA +I + I D AASR+LAFC S S D +YA +F I
Sbjct: 28 LRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPS-DRNYAYLVFTRINH 86
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNM--RRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
N F+WNT+IR + S P+ AI ++++M P + T+ V KA +++ +
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGR 146
Query: 136 QIHTHVSKSGLDLDLHVVN----------CLVRCYSV---------------------SS 164
Q+H V K GL+ D + N CLV + +
Sbjct: 147 QLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCG 206
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ A+++FDE+ R W +MISG+ ++ R +AL +F +M +P+ T+ S+L+
Sbjct: 207 LIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLN 266
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
ACA G E G +H ++ FE+ +I+ TAL+ MY K G + +F+ P + ++
Sbjct: 267 ACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSC 326
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN+MI GLA++G E A+DLF +LE+ + P+ ++F+GVL+AC H+G + + F M+
Sbjct: 327 WNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMR 386
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
Y IEP I+HY CMV++LG G + EAE LIK+M + D ++W +LLAAC+ +GN+E+A
Sbjct: 387 EKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMA 446
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA 430
+R + L+P+ YV++SN YA
Sbjct: 447 KRAANCLKNLDPDETCGYVLMSNAYA 472
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 256/447 (57%), Gaps = 33/447 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LS++ C +M L+Q HA +I S + + FAASR+LAFCA S G++ YA +F +
Sbjct: 25 PYLSMVDKYCTTMRDLQQFHAHLIKSGQAIESFAASRILAFCA-SPLGNMDYAYLVFLQM 83
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTFVLKACSNVRSLNCC 134
Q+PN F WNT+IR + S NP A++L+++M + P + T+ + KA S + +
Sbjct: 84 QNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDG 143
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
Q+H + K GL D + N ++ Y+ L+ AR++F++ + W +MI G A+
Sbjct: 144 AQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKC 203
Query: 195 FRANEALMLFDQMLM-------------------------------EGFEPNSVTLASVL 223
+E+ LFD+M + E +P+ T+ S+L
Sbjct: 204 GEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLL 263
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
+A AQ G L G +H ++K ++ AI+ TA++ MY K G++ A +F+ +P R+++
Sbjct: 264 NASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLS 323
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN+MI GLA +G +EA+ +F+ LE + P+ I+F+ VL+AC H +D G + F M
Sbjct: 324 SWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRM 383
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
K Y IEP I+HY MVD++ R G + EAE+ IK M + D ++WG LL+AC+ +GN E+
Sbjct: 384 KNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEM 443
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYA 430
A+R +++ L+P YV+++N++A
Sbjct: 444 AKRAAEKVNELDPEETMGYVLMANIHA 470
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 209/500 (41%), Gaps = 92/500 (18%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD-LHVVNCLVRCYSVSSDLNNARQV 172
NQ + V K C+ +R L +Q H H+ KSG ++ L C S +++ A V
Sbjct: 23 NQPYLSMVDKYCTTMRDL---QQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLV 79
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGC 231
F +++N L W T+I G++QS AL LF ML+ EP +T S+ A +Q G
Sbjct: 80 FLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGL 139
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
G ++H + G + + +++MY G L++A+ +F+ E ++ +WN+MI G
Sbjct: 140 AHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILG 199
Query: 292 LAS-------------------------------HGHAEEALDLFRKLEKEQIVPNDITF 320
LA +G +EAL LF K+++E+I P++ T
Sbjct: 200 LAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTM 259
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM- 379
V +L+A G + G I +K+ ++ ++D+ +CG + A ++ +++
Sbjct: 260 VSLLNASAQIGALRQGVWIHEYIKK-NNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIP 318
Query: 380 -----VW----------------------------KPDVVMWGALLAACKNHG-----NI 401
W KPD + + A+L AC NHG +
Sbjct: 319 CRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTAC-NHGAMVDEGM 377
Query: 402 EVAERVVKEIIALEPN-NHGVYVVLSNMYA------EAESMKMQLEILLVQVLFAGLASA 454
E R +K +EP+ H Y ++ +M + EAE + I +++ L SA
Sbjct: 378 EFFSR-MKNTYRIEPSIKH--YNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSA 434
Query: 455 ADILQNPDFESPPT----NLTPNRSTPFVLLNGNNTIPGWTFEGTVQYVTASQTIRLPDN 510
I N + L P + +VL+ N G F G ++ A + ++
Sbjct: 435 CRIYGNTEMAKRAAEKVNELDPEETMGYVLM-ANIHAWGNNFVGAMEKRVAMRMKKVEKE 493
Query: 511 GHAIQLAQDGRINQTFAADG 530
+ D +++ A G
Sbjct: 494 PGGSFIEVDEEVHEFIAGGG 513
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 144/302 (47%), Gaps = 14/302 (4%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
L+ G++ + +LF+ + N WN++I + +A+ L++ M+ P++ T
Sbjct: 199 GLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFT 258
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+L A + + +L IH ++ K+ L L+ VV ++ Y + NA QVF++I
Sbjct: 259 MVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIP 318
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R+L+ W +MI G A + EA+++F + +P+ ++ +VL+AC ++ E
Sbjct: 319 CRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVD--EG 376
Query: 238 VHVFVKMRG---FEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLA 293
+ F +M+ E +V M ++ G L +A+ +MP E++ W ++S
Sbjct: 377 MEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACR 436
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPK 352
+G+ E A R EK + + T VL A HA G G+M KRV K
Sbjct: 437 IYGNTEMAK---RAAEKVNELDPEETMGYVLMANIHAW----GNNFVGAMEKRVAMRMKK 489
Query: 353 IE 354
+E
Sbjct: 490 VE 491
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 214/383 (55%), Gaps = 36/383 (9%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ----IHT 139
+ LIRA ASS P A+ LY ++ R G P HT +LK+ + ++ ++ +H
Sbjct: 57 DALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHA 116
Query: 140 HVSKSGLD--------------------------------LDLHVVNCLVRCYSVSSDLN 167
H + GL +D N L+ ++ + +
Sbjct: 117 HAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVA 176
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
+AR +FDE+ R W+ M++GY Q+ EAL +F QM +G P+ L VL+ACA
Sbjct: 177 DARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACA 236
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
Q G LE G+ VH ++K M LGTALV MY K G + +F+ M ++N+ W
Sbjct: 237 QLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTT 296
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
MI GLA HG ++L LF ++E + P+DI F+G L AC H G +D GR++F SM Y
Sbjct: 297 MIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNY 356
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
GI+PKIEHYGCMVDLL R G + EA +++++M KPD ++WGAL+A C+ H N+E+AE V
Sbjct: 357 GIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYV 416
Query: 408 VKEIIALEPNNHGVYVVLSNMYA 430
+K I LEP+ G YV+L N+Y+
Sbjct: 417 IKHWIELEPDKSGAYVLLGNIYS 439
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 123/246 (50%), Gaps = 2/246 (0%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A + +G ++ A LF+ + N W+ ++ + + +A+ ++ M+ G P+
Sbjct: 168 AHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTV 227
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
VL AC+ + +L K +H ++ + + + + + LV Y+ ++ +VF+ ++
Sbjct: 228 LVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMK 287
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
++ + WTTMI G A R +++L LF QM G +P+ + L AC +G ++ G +
Sbjct: 288 DKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRE 347
Query: 238 V-HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA-TWNAMISGLASH 295
+ + V G + +V + +NG L++A+ + + MP + A W A+++G H
Sbjct: 348 LFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFH 407
Query: 296 GHAEEA 301
+ E A
Sbjct: 408 KNVELA 413
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 248/453 (54%), Gaps = 33/453 (7%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
R + PP+ K ++ + ++H + + D F + L+ A + G ++YA
Sbjct: 111 RFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYA--ACGRINYA 168
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
+F+ + + WNT+I D+A L+ M+ + P++ ++ AC
Sbjct: 169 RNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRT 228
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCY---------------------------- 160
++ + I+ + ++ + +D H++ LV Y
Sbjct: 229 GNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMV 288
Query: 161 ---SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
S + L++AR +FD+ + L WTTMIS YA+S EAL +F++M G +P+ V
Sbjct: 289 SGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVV 348
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T+ SV+SAC G L+ + VH + + G E + AL++MY K G L A+ +F+ M
Sbjct: 349 TMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKM 408
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
P RN+ +W++MI+ A HG A ++L LF ++++E + PN++TFVGVL C H+G ++ G+
Sbjct: 409 PTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 468
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
+IF SM Y I PKIEHYGCMVDL GR + EA E+I+ M P+VV+WG+L++AC+
Sbjct: 469 KIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRV 528
Query: 398 HGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
HG +E+ E K I+ LEP++ G V++SN+YA
Sbjct: 529 HGELELGELAAKRILKLEPDHDGALVLMSNIYA 561
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 201/426 (47%), Gaps = 39/426 (9%)
Query: 10 QPPLPIPPLSLLADK---CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS 66
+P + + + +K CKS++ +KQ+HA ++ + + +H S L SSS +LS
Sbjct: 7 RPSFAVSAANTILEKLSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSFSSSSINLS 64
Query: 67 YATRLFNSIQS-PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
YA LF+SI P ++N+L+R + S P I Y +R G ++ +F +LKA
Sbjct: 65 YALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAV 124
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S V +L ++H K D V L+ Y+ +N AR VFDE+ R + W
Sbjct: 125 SKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWN 184
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
TMI Y + +EA LF++M P+ + L +++SAC ++G + ++ F+
Sbjct: 185 TMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEN 244
Query: 246 GFEMGAILGTALVHM-------------------------------YTKNGALAKAKALF 274
M L TALV M Y+K G L A+ +F
Sbjct: 245 DVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIF 304
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
D +++ W MIS A H +EAL +F ++ I P+ +T + V+SAC + G +D
Sbjct: 305 DQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLD 364
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ + + G+E + ++++ +CG + A ++ ++M + +VV W +++ A
Sbjct: 365 KAKWVH-RYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINA 422
Query: 395 CKNHGN 400
HG
Sbjct: 423 FAMHGE 428
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 252/446 (56%), Gaps = 34/446 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L+ +C +M +LKQIHA +I + I D ASR+LAFC S S D++YA +F I
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINH 86
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNM--RRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
N F+WNT+IR + S P+ AI ++++M P + T+ V KA + +
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 136 QIHTHVSKSGLDLDLHVVN----------CLVRCYSV---------------------SS 164
Q+H V K GL+ D + N CL+ + +
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ A+ +FDE+ R W +MISG+ ++ R +AL +F +M + +P+ T+ S+L+
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
ACA G E G +H ++ FE+ +I+ TAL+ MY K G + + +F+ P++ ++
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN+MI GLA++G E A+DLF +LE+ + P+ ++F+GVL+AC H+G + + F MK
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
Y IEP I+HY MV++LG G + EAE LIK M + D V+W +LL+AC+ GN+E+A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA 430
+R K + L+P+ YV+LSN YA
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYA 472
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/410 (37%), Positives = 237/410 (57%), Gaps = 4/410 (0%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASR-LLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
C ++ +LK+I A +I++ +Q+H A S +L FCA+S SG L YA LF I +P W
Sbjct: 19 CNNLTRLKKIQAHVIVNG-LQNHPAISNSILNFCAVSISGSLPYAQHLFRHILNPQTQAW 77
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N++IR A S +P +AIF Y M + P+ TF+F LKAC +++L C+++H +
Sbjct: 78 NSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCEEVHGSII 137
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
++G + D+ V LVRCY + + AR VFD + R L W MIS Y+Q+ EAL
Sbjct: 138 RTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQEALR 197
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
++D M E + TL +LS+C+ G L +G K+H +G +G AL+ MY
Sbjct: 198 VYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNVFVGNALIDMYA 257
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G+L A +F+ MP R+ TWN+MI G HG +EA+ F ++ + + PN I F+G
Sbjct: 258 KCGSLDGALEVFNGMP-RDAFTWNSMIVGFGVHGFGDEAIYFFNQMLEAGVRPNSIAFLG 316
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+L C H G ++ G + F M + ++P I+HYGC+VD+ GR GK+ +A E+I W+
Sbjct: 317 LLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKALEIIGDSPWQ 376
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
D V+W LL++ K H N+ + E ++ + L N G V+L+ +YA A
Sbjct: 377 DDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAGA 426
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 246/440 (55%), Gaps = 39/440 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+Q+KQ+HA + + + RLL +L YA +LF+ ++P F++N LI
Sbjct: 1 MNQIKQLHAHCLRTGVDETKDLLQRLLLI------PNLVYARKLFDLHRNPCIFLYNKLI 54
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
++ + P ++I LY + G PN HTF F+ A ++ S + +H+ +SG +
Sbjct: 55 QSYSVHHQPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D L+ Y+ L AR+VFDE+ NR + VW MI+GY + A+ LFD M
Sbjct: 115 SDSFCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 208 ----------LMEGF----------------------EPNSVTLASVLSACAQSGCLELG 235
++ GF +PN +TL SVL ACA G LE+G
Sbjct: 175 PNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIG 234
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM-PERNIATWNAMISGLAS 294
++ + + GF + A + MY+K G + AK LFD + +RN+ +WN+MI LA+
Sbjct: 235 RRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLAT 294
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG +EAL+L+ ++ +E P+ +TFVG+L AC H G + G+++ SM+ V+ I PK+E
Sbjct: 295 HGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLE 354
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGCM+DLLGR GK+ EA +LIK M KPD V+WG LL AC HGN+E+AE + ++ L
Sbjct: 355 HYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMKL 414
Query: 415 EPNNHGVYVVLSNMYAEAES 434
EP N G V++SN+YA E
Sbjct: 415 EPTNPGNCVIMSNIYAANEK 434
>gi|15239985|ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g43790
gi|10177948|dbj|BAB11307.1| unnamed protein product [Arabidopsis thaliana]
gi|332007627|gb|AED95010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 460
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 247/422 (58%), Gaps = 18/422 (4%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L KCKS+ LKQIHAQ+I + S+LL LSS+ LSYA + I +P+
Sbjct: 15 LISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLH---LSSTVCLSYALSILRQIPNPSV 71
Query: 81 FMWNTLIRAQASSLNPDK---AIFLY---MNMRRTGFAPNQHTFTFVLKACS-NVRSLNC 133
F++NTLI + S+ N + A LY ++ R PN+ T+ + KA + +
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 134 CKQIHTHVSK--SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ +H HV K ++ D V LV Y+ L AR +F+ IR L W T+++ Y
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 192 AQSFRAN---EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
A S + E L+LF +M + PN ++L +++ +CA G G HV+V
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+ +GT+L+ +Y+K G L+ A+ +FD M +R+++ +NAMI GLA HG +E ++L++ L
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ +VP+ TFV +SAC H+G +D G QIF SMK VYGIEPK+EHYGC+VDLLGR G+
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EAEE IK+M KP+ +W + L + + HG+ E E +K ++ LE N G YV+LSN+
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 429 YA 430
YA
Sbjct: 429 YA 430
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 244/420 (58%), Gaps = 9/420 (2%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAAS---RLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
+++ + +++H Q I D + ++ R+ A C + S A ++F++ +
Sbjct: 139 RAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRS-----ARKVFDTSPQRDLVS 193
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
W T+I+ + + L+ M + T VL +C+ + L +++H ++
Sbjct: 194 WTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYII 253
Query: 143 K-SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+ S ++LD+ V N LV Y D N AR+VF E+ + + W +MISG AQ + E+L
Sbjct: 254 RNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESL 313
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
+F +M G +P+ VTL +VL++CA G LELG+ VH ++ +G ALV MY
Sbjct: 314 YMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMY 373
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G++ +A +F +M +++ ++ AMI GLA HG +ALDLF ++ K I P+++TFV
Sbjct: 374 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFV 433
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL+AC H G ++ GR+ F M +Y + P++EHYGCMVDLLGR G + EAEE I+ M
Sbjct: 434 GVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPI 493
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
+PD + GALL ACK HG +E+ E V+K+I +EP G YV++SN+Y+ A + L++
Sbjct: 494 EPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKL 553
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 224/403 (55%), Gaps = 16/403 (3%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDH--FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
CKS+ LKQIHA +I + D ++RL A CA S D YA L +++PN +
Sbjct: 32 CKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPL 91
Query: 83 WNTLIRAQASSLNPD-KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
+N +IR A+S N + + +Y M G P+ +T FVLKAC+ R++ +++H
Sbjct: 92 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQA 151
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K GL D++V N L+R Y+V + +AR+VFD R L WTTMI GY + A E +
Sbjct: 152 IKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGV 211
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF-VKMRGFEMGAILGTALVHM 260
LF +M E + + +TL VLS+CA+ G L LG K+H + ++ + +G ALV M
Sbjct: 212 GLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDM 271
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G A+ +F MP +N+ +WN+MISGLA G +E+L +FRK+++ + P+D+T
Sbjct: 272 YLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTL 331
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG----CMVDLLGRCGKVLEAEELI 376
V VL++C + G +++G+ + + R +I G +VD+ +CG + +A +
Sbjct: 332 VAVLNSCANLGVLELGKWVHAYLDR-----NQIRADGFIGNALVDMYAKCGSIDQACWVF 386
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPN 417
+ M K DV + A++ HG A + E+ + +EP+
Sbjct: 387 QAMNRK-DVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPD 428
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 227/411 (55%), Gaps = 33/411 (8%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM--RRTGFAPNQH 116
LS G + A RLF+ + WNTLI NP +A+ L+ M P++
Sbjct: 170 LSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEV 229
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T + C +R L +++H V G+ + ++N L+ Y L A+ VF+ I
Sbjct: 230 TMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERI 289
Query: 177 RNRTLNVWTTMI-------------------------------SGYAQSFRANEALMLFD 205
+RT+ WTTMI +GY Q + EAL LF
Sbjct: 290 EHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFH 349
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M P+ +T+ ++L+AC+Q G LE+G VH +++ LGT+L+ MY K G
Sbjct: 350 EMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCG 409
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ KA +F +PE+N TW AMI GLA+HGHA EA++ FR + + P++ITF+GVLS
Sbjct: 410 NIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLS 469
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
ACCHAG + GR+ F M+ Y +E K++HY CM+DLLGR G + EAE+L+ M +PD
Sbjct: 470 ACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDA 529
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
V+WGA+ AC+ GNI + E+ +++ ++P++ G+YV+L+NMYAEA K
Sbjct: 530 VVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRK 580
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 206/436 (47%), Gaps = 62/436 (14%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCAL------------SSSGDLSYATRLFNSIQSPNH 80
QIHA ++ + +QD S LLA S L +A L +S+ +
Sbjct: 28 QIHAHLLAAGLLQDF---SSLLAAAYALSTTATATDARTSPPSPLRHALALLSSLPASA- 83
Query: 81 FMWNTLIRAQASSLNPDK--------AIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSL 131
+N IRA + S + D+ + LY + R+G A P+ TF F+LKAC+ +R
Sbjct: 84 --YNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREW 141
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
HV + GLD D+ VVN S+ + +AR++FD R L W T+I GY
Sbjct: 142 GYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGY 201
Query: 192 AQSFRANEALMLFDQMLMEG--FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
+ EAL LF +M+ E P+ VT+ + +S C Q LELG ++H FV G
Sbjct: 202 VRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSC 261
Query: 250 GAILGTALVHMYTKNGALAKAKA-------------------------------LFDSMP 278
L AL+ MY K G+L AK+ +FD MP
Sbjct: 262 TVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMP 321
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
ER++ WNA+++G +EAL LF ++++ +VP++IT V +L+AC G +++G
Sbjct: 322 ERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMW 381
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ +++ + + + ++D+ +CG + +A + K + K + + W A++ NH
Sbjct: 382 VHRYIEK-HRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEK-NALTWTAMICGLANH 439
Query: 399 GNIEVAERVVKEIIAL 414
G+ A + +I L
Sbjct: 440 GHANEAIEHFRTMIEL 455
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 121/274 (44%), Gaps = 22/274 (8%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC S+ K + RI+ S + G + A ++F+ + + F W
Sbjct: 275 KCGSLEMAKSVF------ERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPW 328
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N L+ +A+ L+ M+ P++ T +L ACS + +L +H ++ K
Sbjct: 329 NALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEK 388
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
L + + L+ Y+ ++ A +F EI + WT MI G A ANEA+
Sbjct: 389 HRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEH 448
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGE--------KVHVFVKMRGFEMGAILGT 255
F M+ G +P+ +T VLSAC +G ++ G K H+ KM+ + +
Sbjct: 449 FRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHY-------S 501
Query: 256 ALVHMYTKNGALAKAKALFDSMP-ERNIATWNAM 288
++ + + G L +A+ L ++MP E + W A+
Sbjct: 502 CMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAI 535
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 248/450 (55%), Gaps = 39/450 (8%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG--DLSYATRLFNSIQS 77
+L +KCKSM LKQ HAQ+ + + FA SR+LAFC+ L+YA R+F IQ+
Sbjct: 10 VLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQN 69
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P ++NTLI+A + A+ +++ M ++ P+ +T +VLKAC + K I
Sbjct: 70 PTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMI 129
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + SK GL D++V N L+ Y V D+ AR VFDEI + + W+ MISGYA+
Sbjct: 130 HGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDV 189
Query: 198 NEALMLFDQ-------------------------------MLMEGFEPNSVTLASVLSAC 226
+ A + FD+ M + P+ S+LSAC
Sbjct: 190 DSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSAC 249
Query: 227 AQSGCLELGEKVHVFV-KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
A G LE+G +H + +++ + L T+L+ MY K G L AK LFDSM R++ W
Sbjct: 250 AHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCW 309
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
NAMISG+A HG + AL LF +EK + P+DITF+ V +AC ++G G + M
Sbjct: 310 NAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCS 369
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV--W--KPDVVMWGALLAACKNHGNI 401
VY I PK EHYGC+VDLL R G EA +I+++ W + + W A L+AC NHG
Sbjct: 370 VYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGET 429
Query: 402 EVAERVVKEIIALEPNNH-GVYVVLSNMYA 430
++AE ++++ L+ + H GVYV+LSN+YA
Sbjct: 430 QLAELAAEKVLQLDNHIHSGVYVLLSNLYA 459
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 251/460 (54%), Gaps = 38/460 (8%)
Query: 9 RQPPLP----IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
+ P P P L A + + + K H +I D F + L+ F A G+
Sbjct: 129 QSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYA--KCGE 186
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L R+F +I + WN++I A P++A+ L+ M PN T VL A
Sbjct: 187 LGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSA 246
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+ + +H+++ ++ + L + N ++ Y+ + +A+++FD++ + + W
Sbjct: 247 CAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSW 306
Query: 185 TTMISGYA-------------------------------QSFRANEALMLFDQM-LMEGF 212
TTM+ GYA Q + EAL LF ++ L +
Sbjct: 307 TTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTA 366
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ VTL S LSACAQ G ++LG +HV++K +G ++ L T+L+ MY K G L KA
Sbjct: 367 KPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALM 426
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F S+ +++ W+AMI+GLA HGH ++A+ LF K++++++ PN +TF +L AC H G
Sbjct: 427 VFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL 486
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ GR F M+ VYG+ P ++HY CMVD+LGR G + EA ELI++M P +WGALL
Sbjct: 487 VEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 546
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AC H N+ +AE+ ++I LEP NHG YV+LSN+YA+A
Sbjct: 547 GACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKA 586
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 219/418 (52%), Gaps = 36/418 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSL+ D+C QLKQIHAQM+ + D F+ASRL+ ALS L YA ++F+ I
Sbjct: 37 PTLSLI-DQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCC 134
PN + WNTLIRA ASS NP +++ +++ M ++ P++ TF F++KA S + L
Sbjct: 96 PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTG 155
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
K H V K L D+ ++N L+ Y+ +L +VF I R + W +MI+ + Q
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQG 215
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EAL LF +M + +PN +T+ VLSACA+ E G VH +++ L
Sbjct: 216 GCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLS 275
Query: 255 TALVHMYTKNGALAKAKALFDSMPER-------------------------------NIA 283
A++ MYTK G++ AK LFD MPE+ +IA
Sbjct: 276 NAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIA 335
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGS 342
WNA+IS G +EAL+LF +L+ + P+++T V LSAC G +D+G I
Sbjct: 336 AWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVY 395
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+K+ G++ ++D+ +CG L+ ++ V + DV +W A++A HG+
Sbjct: 396 IKK-QGMKLNCHLTTSLIDMYCKCGD-LQKALMVFHSVERKDVFVWSAMIAGLAMHGH 451
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/404 (39%), Positives = 243/404 (60%), Gaps = 5/404 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+ + ++HA+++ + A RLL CA S+ LSYA +F+ I P+ F +NT+I
Sbjct: 1 MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
RA A S L+ M G +P+ TF FVLKAC+ +++ +H+ + K G D
Sbjct: 61 RAHADSSPSFSLS-LFSKMAMAGVSPDHFTFPFVLKACARLQT---GLDLHSLLFKLGFD 116
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D++V N L+ Y L+ A +VF+E+ R L W++MI+ +A++ EAL LF +M
Sbjct: 117 SDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRM 176
Query: 208 LMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+ G +P+ V + SV+SA + G LELG+ + F+ G E LGTALV M+++ G
Sbjct: 177 QLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGC 236
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ ++ +FD M ERN+ TW A+I+GLA HG + EAL +F ++ P+ +TF GVL A
Sbjct: 237 IEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVA 296
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G + G +F S++ YG+EP EHYGCMVDLLGR G + EA + + M +P+ +
Sbjct: 297 CSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSI 356
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+W LL AC NH IE+AE+V ++I L+ + G YV+LSN+Y
Sbjct: 357 IWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYG 400
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 247/459 (53%), Gaps = 36/459 (7%)
Query: 8 LRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
L++ P +P +L C + +++QIHAQ I+S + A RLL + S + Y
Sbjct: 18 LKRTPARMPATVILLQMCHNFQEVRQIHAQFIVSGLLARPPNAGRLLD--SYVSMSQIYY 75
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +FN I SP+ F +N +IR P ++ LY + G P+ +T+TFVLK CS+
Sbjct: 76 ALLVFNRIPSPDVFAYNAMIRGLTLGNCPYDSLLLYNKLLLGGLTPDNYTYTFVLKVCSH 135
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHV-------------------------------VNCL 156
++++ KQ+H V K+G+ D H+ +N +
Sbjct: 136 LKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLAECSQENVLAINSM 195
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM---EGFE 213
+ Y + AR +FD++ + W+ MI+GY ++ EAL++F +M+M G +
Sbjct: 196 ISGYMSQGHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQ 255
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN L S LSA A G L+ G +H +++ G ++ LGT LV MY K G++ + L
Sbjct: 256 PNESALVSSLSATACLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKL 315
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F M +R++ TW M+SG A HG A + LF ++ PN++ FV +LSAC HAG++
Sbjct: 316 FREMQQRDVVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYL 375
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
++G F M +GI P +EHYGCMVDLLGR G++ EAEELI M +P V+WGALL+
Sbjct: 376 ELGHHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLS 435
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AC+ H ++ R ++++ LEP Y + M++ A
Sbjct: 436 ACRIHKDLRRGRRAFRQLMQLEPLRGDRYKLAGQMFSSA 474
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/404 (40%), Positives = 240/404 (59%), Gaps = 5/404 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP-NHFMWNTLIRAQ 90
+Q+HA++++S D A+RL+ A S G +S A RLF+ + + N F+WN LIRA
Sbjct: 83 RQLHARLLVSGLGLDAVLATRLVDLYA--SCGLVSVARRLFDEMPNQGNVFLWNVLIRAY 140
Query: 91 ASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
A + AI LY M G P+ T+ VLKAC+ + L +++H V ++ D
Sbjct: 141 ARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAAD 200
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+ V L+ Y+ ++ A VFD R VW +MI+ Q+ R EAL L M
Sbjct: 201 VFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAA 260
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EG P VTL S +SA A +G L G ++H + RGF L T+L+ MY K+G +
Sbjct: 261 EGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTV 320
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACC 328
A+ LFD + R + +WNAMI G HGHA+ A +LFR++ E Q++P+ ITFVGVLSAC
Sbjct: 321 ARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACN 380
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G + +++F M VY I+P ++HY C+VD+LG G+ EA ++IK M+ KPD +W
Sbjct: 381 HGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIW 440
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
GALL CK H N+E+AE + ++I LEP + G YV+LSN+YA++
Sbjct: 441 GALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQS 484
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 6/301 (1%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
N + + +L++C R++ +Q+H + SGL LD + LV Y+ ++ AR++F
Sbjct: 62 NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121
Query: 174 DEIRNR-TLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGC 231
DE+ N+ + +W +I YA+ A+ L+ +ML G EP++ T VL ACA
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L G +VH V + + L+ MY K G + +A A+FDS R+ WN+MI+
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIE 350
+G EAL L R + E I P +T V +SA AG + GR++ G +R +G +
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
K++ ++D+ + G V A L ++ + +++ W A++ HG+ + A + +
Sbjct: 302 DKLK--TSLLDMYAKSGWVTVARVLFDQLFHR-ELISWNAMICGFGMHGHADHACELFRR 358
Query: 411 I 411
+
Sbjct: 359 M 359
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 236/407 (57%), Gaps = 2/407 (0%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+ K++ + +Q+HA ++ S + F + L+ A + G + A +F+ + + W
Sbjct: 133 RMKALREGEQVHALILKSGFKSNEFVENTLIQMYA--NCGQIGVARHVFDGMPERSIVAW 190
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N+++ + D+ + L+ + + T VL AC + +L + I ++
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL + + L+ Y+ ++ AR++FDE+ R + W+ MISGYAQ+ R EAL L
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F +M PN VT+ SVL +CA G E G+ VH ++K + ++ LGT L+ Y K
Sbjct: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAK 370
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G + ++ +F M +N+ TW A+I GLA++G + AL+ F + + + PND+TF+GV
Sbjct: 371 CGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGV 430
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC HA +D GR +F SM+R + IEP+IEHYGCMVD+LGR G + EA + I M + P
Sbjct: 431 LSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPP 490
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ V+W LLA+C+ H NIE+AE+ ++ I LEP + G Y++LSN YA
Sbjct: 491 NAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 537
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 223/416 (53%), Gaps = 4/416 (0%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
P P SL+ +CK+ L+Q+HA ++ + R+ D +L AL + YA +F
Sbjct: 19 FPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIF 78
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
N I P +N +IR A +PD A+ L+ M ++ TF+ VLKACS +++L
Sbjct: 79 NHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALR 138
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+Q+H + KSG + V N L++ Y+ + AR VFD + R++ W +M+SGY
Sbjct: 139 EGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYT 198
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
++ +E + LF ++L E + VT+ SVL AC + LE+GE + ++ +G
Sbjct: 199 KNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNT 258
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
L T+L+ MY K G + A+ LFD M +R++ W+AMISG A +EAL+LF +++K
Sbjct: 259 LTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGN 318
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ PN++T V VL +C G + G+ + +K+ ++ + ++D +CG + +
Sbjct: 319 VYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKK-KKMKLTVTLGTQLIDFYAKCGYIDRS 377
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
E+ K M +K +V W AL+ N+G ++A ++ ++PN+ VLS
Sbjct: 378 VEVFKEMSFK-NVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLS 432
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 241/425 (56%), Gaps = 7/425 (1%)
Query: 11 PPLPIPPLSLLA-DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P + P+ L A K + + +Q+H + + D + + LL F S G A
Sbjct: 103 PDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHF--YSVCGKWGGAG 160
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
R+F+ + + W LI + D+AI L++ M PN TF VL AC +
Sbjct: 161 RVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMD---VVPNVATFVSVLVACGRMG 217
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
L+ K +H V K + L V N LV Y L AR++FDE+ +R + WT++IS
Sbjct: 218 YLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIIS 277
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
G Q + ++L LF M + G EP+ + L SVLSACA G L+ G V +++ +G E
Sbjct: 278 GLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEW 337
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+GTALV MY K G + A +F+ +P RNI TWNA++ GLA HGH EAL F +
Sbjct: 338 DIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMI 397
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGK 368
I PN++TF+ +L+ACCH+G + GR F M + + P++EHYGCM+DLL R G
Sbjct: 398 GAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGL 457
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EA + I+ M PDV++WGALL+ACK +GN+E+++ ++ ++ L+ + GVYV+LSN+
Sbjct: 458 LDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNI 517
Query: 429 YAEAE 433
YA E
Sbjct: 518 YATNE 522
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 218/426 (51%), Gaps = 18/426 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH--- 80
+CK++ LKQIHA +I S + D F S++ F G + YA N Q+ H
Sbjct: 14 RCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFG-KHIGFVDYAFDFLN--QTDLHVGT 70
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+NTLI A ASS P A +Y + GF P+ +TF VLKAC+ + +Q+H
Sbjct: 71 LPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGV 130
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
K G DL+V N L+ YSV A +VFDE+ R + WT +ISGY ++ +EA
Sbjct: 131 AVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEA 190
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ LF +M PN T SVL AC + G L +G+ VH V R F +G ++G ALV M
Sbjct: 191 INLFLKM---DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDM 247
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K L +A+ LFD +P+R+I +W ++ISGL +++L+LF ++ + P+ I
Sbjct: 248 YVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIIL 307
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
VLSAC G +D GR + ++R GIE I +VD+ +CG +E I +
Sbjct: 308 TSVLSACASLGALDYGRWVQEYIER-QGIEWDIHIGTALVDMYAKCG-CIEMALHIFNGI 365
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVL-----SNMYAEAE 433
++ W ALL HG+ A + + +I + PN +L S + AE
Sbjct: 366 PNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGR 425
Query: 434 SMKMQL 439
S Q+
Sbjct: 426 SYFYQM 431
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 229/406 (56%), Gaps = 33/406 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S SG + A LF I + + W T+I +A+ +Y +M RTG PN+
Sbjct: 261 SKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIV 320
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN------------ 167
++ AC +++ +Q H + ++G D + ++ Y+ ++N
Sbjct: 321 DLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKD 380
Query: 168 -------------------NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
ARQ+FDE+ R + W++MISGY+Q+ + + AL LF +M+
Sbjct: 381 HVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMV 440
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G +PN +T+ SV SA A G L G H ++ + L AL+ MY K G++
Sbjct: 441 AGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSIT 500
Query: 269 KAKALFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A LF + +R +++ WNA+I GLA HGHA +L LF +L++ +I PN ITF+GVLSA
Sbjct: 501 IALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSA 560
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCHAG +D G + F MK +Y IEP I+HYGCM+DLLGR G++ EA E+I++M K DVV
Sbjct: 561 CCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVV 620
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG LLAAC+ HGN+E+ ER + + L+ ++ V+LSN+YA+A
Sbjct: 621 IWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADA 666
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 186/430 (43%), Gaps = 66/430 (15%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
SG L A LF + + T++ A + +AI ++ +MR G PN+ T V
Sbjct: 131 SGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASV 190
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR-- 179
+ A S+V + C+ +H K GL+ V LV Y V S L NAR +FDEI R
Sbjct: 191 ISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNV 250
Query: 180 -TLNV----------------------------WTTMISGYAQSFRANEALMLFDQMLME 210
T NV W T+I GY Q R EAL ++ ML
Sbjct: 251 VTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRT 310
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY--------- 261
G PN V + ++SAC ++ + G++ H + GF+ + ++H Y
Sbjct: 311 GVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLA 370
Query: 262 ----------------------TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+NG + +A+ LFD MPER++ +W++MISG + + +
Sbjct: 371 FLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPD 430
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
AL LF ++ + PN+IT V V SA G + GR + I +
Sbjct: 431 LALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILS-NSIPLNDNLNAAL 489
Query: 360 VDLLGRCGKVLEAEELIKRMVWK-PDVVMWGALLAACKNHGNIEVAERVVKEI--IALEP 416
+D+ +CG + A +L + + V W A++ HG+ V+ ++ ++ + ++P
Sbjct: 490 IDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKP 549
Query: 417 NNHGVYVVLS 426
N+ VLS
Sbjct: 550 NSITFIGVLS 559
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 159/357 (44%), Gaps = 64/357 (17%)
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL----VRC------------- 159
T LK+CS++ +L+ +QIH+ V KSGL ++ V N L V+C
Sbjct: 54 TLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTC 113
Query: 160 --------------YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
Y S L+NAR +F+++ + +TTM+ G AQ+ EA+ +F
Sbjct: 114 SVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFK 173
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
M G PN VTLASV+SA + G + +H G E I+ T LVHMY
Sbjct: 174 DMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCS 233
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV----------- 314
+L A+ LFD +PERN+ TWN M++G + G + A DLF ++ + +V
Sbjct: 234 SLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQ 293
Query: 315 --------------------PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
PN++ V ++SAC + G+Q G + R G +
Sbjct: 294 IERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRT-GFDCYDF 352
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++ CG++ L + K V W AL++ +G IE A ++ E+
Sbjct: 353 IQATIIHFYAACGEI-NLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEM 408
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 45/234 (19%)
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM---------------- 260
+TL S L +C+ L G+++H V G + +L+
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 261 ---------------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
Y K+G+L A+ LF+ MP + ++ M+ GLA + EA+ +F
Sbjct: 113 CSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVF 172
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP------KIEHYGCM 359
+ + ++PN++T V+SA H G I + ++ ++ G+E + H C+
Sbjct: 173 KDMRFAGVIPNEVTLASVISAYSHVGGI-LNCRMLHALSFKLGLEALNIVATNLVHMYCV 231
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
LG +VL +E+ +R +VV W +L G +++A + + I A
Sbjct: 232 CSSLGN-ARVL-FDEIPER-----NVVTWNVMLNGYSKSGLVDLARDLFERIPA 278
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 244/409 (59%), Gaps = 6/409 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS--PNHFMWNT 85
+H+ ++IH+ + D F + L++ A SS G + A +F+ + + + WN+
Sbjct: 143 LHKGREIHSSTLKLGVHLDVFVQNALIS--AFSSCGAVEAARAVFDMLPALVRDVVSWNS 200
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I S + A+ ++ + G +P++ T L C + L+ K+IH + S
Sbjct: 201 MISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGS 260
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G LD+ V + L+ YS + +AR+VFD I +R WT+MI+GYAQS EA+ LF
Sbjct: 261 GFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELF 320
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M + GF ++ T+A VLSAC G L G +H++ + EM AL+ MY+K
Sbjct: 321 REMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKC 380
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFVGV 323
G + KA +F + + +I +W+A+ISGLA +G +++AL LF ++E I PN+ITF+GV
Sbjct: 381 GDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGV 440
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC H GF+D G F +M ++Y + P IEHYGCMVDLLGR ++EAE+ I+ + +P
Sbjct: 441 LCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQP 500
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
DVV+W +LL AC+NHGNIE+AE K+I LEP G V+LSN+YA A
Sbjct: 501 DVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASA 549
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 216/410 (52%), Gaps = 20/410 (4%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
QI + I S +D +S+LL + +LS D +++ LF I PN F WN + RA
Sbjct: 44 FNQILSHAIASGVFRDPVVSSKLLYY-SLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAY 102
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ S P + I LY M R G P+ ++F FVLKAC+ + L+ ++IH+ K G+ LD+
Sbjct: 103 SRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDV 162
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV--WTTMISGYAQSFRANEALMLFDQML 208
V N L+ +S + AR VFD + +V W +MISGY QS R AL +F ++L
Sbjct: 163 FVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELL 222
Query: 209 MEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+G P+ VTL S LS C + G L+LG+K+H GF + +G++L+ MY+K G +
Sbjct: 223 GDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQI 282
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +FD +P RN W +MI+G A +EA++LFR+++ + T VLSAC
Sbjct: 283 EDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSAC 342
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G + GR I +R IE + ++ + +CG + +A E+ + +PD+
Sbjct: 343 GHWGALAQGRWIHLYCER-NSIEMDLNARNALIGMYSKCGDIQKALEIFHGLT-QPDIFS 400
Query: 388 WGALLAACKNHGNIEVAERVVKE---IIALEPN-----------NHGVYV 423
W A+++ +G + A + + I + PN NHG +V
Sbjct: 401 WSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFV 450
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 217/370 (58%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F+S+Q + W +I A KAI L+ M+ GF P + TF+ +L
Sbjct: 581 GSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSIL 640
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
K C++ L+ K++ ++ SG +LD V N L+ YS S + +AR+VFD++ +R +
Sbjct: 641 KVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIV 700
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +I+GYAQ+ A+ QM + PN + S+L+AC+ LE G++VH +
Sbjct: 701 SWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEI 760
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
R + +G AL+ MY K G+ +A+ +FD++ E+N+ TWNAMI+ A HG A +AL
Sbjct: 761 VKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKAL 820
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
F +EKE I P+ TF +LSAC HAG + G QIF SM+ YG+ P IEHYGC+V L
Sbjct: 821 GFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGL 880
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR + EAE LI +M + PD +W LL AC+ HGNI +AE + L N VY
Sbjct: 881 LGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVY 940
Query: 423 VVLSNMYAEA 432
++LSN+YA A
Sbjct: 941 ILLSNVYAAA 950
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 186/337 (55%), Gaps = 2/337 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F Q+ + WN++I A + + A L+ M+ P+ TF VL
Sbjct: 480 GSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVL 539
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
C N +L KQIH +++SGL LD+++ N L+ Y L +AR VF +++R +
Sbjct: 540 SGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVM 599
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT MI G A +A+ LF QM EGF P T +S+L C S CL+ G+KV ++
Sbjct: 600 SWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYI 659
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G+E+ +G AL+ Y+K+G++ A+ +FD MP R+I +WN +I+G A +G + A+
Sbjct: 660 LNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAV 719
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ +++++ +VPN +FV +L+AC ++ G+++ + + ++ + ++ +
Sbjct: 720 EFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVK-RKLQGDVRVGAALISM 778
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+CG EA+E+ ++ K +VV W A++ A HG
Sbjct: 779 YAKCGSQGEAQEVFDNIIEK-NVVTWNAMINAYAQHG 814
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 195/368 (52%), Gaps = 4/368 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH + D + L+ C GD+ A + F + ++N LI A A
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCV--RCGDVDSAKQAFKGTADRDVVVYNALIAALA 306
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A Y MR G A N+ T+ +L ACS ++L K IH+H+S+ G D+
Sbjct: 307 QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ 366
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ N L+ Y+ DL AR++F + R L W +I+GYA+ EA+ L+ QM EG
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P VT +LSACA S G+ +H + G + L AL++MY + G+L +A+
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ R++ +WN+MI+G A HG E A LF++++ E++ P++ITF VLS C +
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+++G+QI G + G++ + ++++ RCG + +A + + + DV+ W A+
Sbjct: 547 ALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAM 604
Query: 392 LAACKNHG 399
+ C + G
Sbjct: 605 IGGCADQG 612
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 187/372 (50%), Gaps = 6/372 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSS----SGDLSYATRLFNSIQSPNHFMWNTLI 87
K + A +I S I + +S + AL S GDL A LF ++ + WN +I
Sbjct: 344 KALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAII 403
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
A + +A+ LY M+ G P + TF +L AC+N + K IH + +SG+
Sbjct: 404 AGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIK 463
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ H+ N L+ Y L A+ VF+ + R + W +MI+G+AQ A LF +M
Sbjct: 464 SNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM 523
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
E EP+++T ASVLS C LELG+++H + G ++ LG AL++MY + G+L
Sbjct: 524 QNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSL 583
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +F S+ R++ +W AMI G A G +A++LF +++ E P TF +L C
Sbjct: 584 QDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVC 643
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
+ +D G+++ + G E ++ + G + +A E+ +M + D+V
Sbjct: 644 TSSACLDEGKKVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAREVFDKMPSR-DIVS 701
Query: 388 WGALLAACKNHG 399
W ++A +G
Sbjct: 702 WNKIIAGYAQNG 713
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 217/420 (51%), Gaps = 10/420 (2%)
Query: 12 PLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
P I +S+L C S +L K+IH+Q+I + +D + LL+ GDL A
Sbjct: 126 PNKITYISILT-ACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSM--YGKCGDLPRA 182
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
++F I + +NT++ A + + L+ M G +P++ T+ +L A +
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
L+ K+IH + GL+ D+ V LV D+++A+Q F +R + V+ +I
Sbjct: 243 SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALI 302
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+ AQ EA + +M +G N T S+L+AC+ S LE G+ +H + G
Sbjct: 303 AALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+G AL+ MY + G L KA+ LF +MP+R++ +WNA+I+G A EA+ L++++
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ E + P +TF+ +LSAC ++ G+ I + R GI+ ++++ RCG
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGS 481
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
++EA+ + + + DV+ W +++A HG+ E A ++ +E+ LEP+N VLS
Sbjct: 482 LMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 188/382 (49%), Gaps = 4/382 (1%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
+ K+IHAQM+ + D F ++ L+ S + A ++F + + WN+LI
Sbjct: 45 EAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRS--VLDAHQVFKEMPRRDVISWNSLISC 102
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
A KA L+ M+ GF PN+ T+ +L AC + L K+IH+ + K+G D
Sbjct: 103 YAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
V N L+ Y DL ARQVF I R + + TM+ YAQ E L LF QM
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EG P+ VT ++L A L+ G+++H G +GTALV M + G +
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDS 282
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
AK F +R++ +NA+I+ LA HGH EA + + ++ + + N T++ +L+AC
Sbjct: 283 AKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACST 342
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ ++ G+ I + G ++ ++ + RCG + +A EL M K D++ W
Sbjct: 343 SKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWN 400
Query: 390 ALLAACKNHGNIEVAERVVKEI 411
A++A + A R+ K++
Sbjct: 401 AIIAGYARREDRGEAMRLYKQM 422
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 155/294 (52%), Gaps = 3/294 (1%)
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T+ +L+ C+ R L K+IH + ++ + D+ + N L+ Y + +A QVF E+
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
R + W ++IS YAQ +A LF++M GF PN +T S+L+AC LE G+
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
K+H + G++ + +L+ MY K G L +A+ +F + R++ ++N M+ A
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ +E L LF ++ E I P+ +T++ +L A +D G++I + G+ I
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIH-KLTVEEGLNSDIRVG 267
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAERVVK 409
+V + RCG V A++ K + DVV++ AL+AA HG N+E E+ +
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGTADR-DVVVYNALIAALAQHGHNVEAFEQYYR 320
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 164/408 (40%), Positives = 241/408 (59%), Gaps = 3/408 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+ +Q+H ++++S D A++L+ A + G + +A RLF+ + N F+WN
Sbjct: 76 RSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYA--ACGLVGHARRLFDGMPKRNVFLWNV 133
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
LIRA A + AI LY M G P+ T+ LKAC+ + L +++H V +
Sbjct: 134 LIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTH 193
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D+ V LV Y+ +++AR VFD IR R VW +MI+ Y Q+ R EAL L
Sbjct: 194 WGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCR 253
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
M G P TL S +SA A + L G ++H F RGF+ L T+LV MY K+G
Sbjct: 254 DMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSG 313
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVL 324
+ A+ LF+ + +R + +WNAMI G HGH +EAL LF K+ E Q+ P++ITFVGVL
Sbjct: 314 WVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVL 373
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
SAC H G + ++ FG M VY I+P ++H+ C+VD+LG G+ EA +LIK M +PD
Sbjct: 374 SACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPD 433
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL CK H N+E+ E ++++I LEP + G YV+LSN+YA++
Sbjct: 434 SGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQS 481
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 152/302 (50%), Gaps = 5/302 (1%)
Query: 112 APNQ-HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNAR 170
+PN H +T VL++C RSL +Q+H + SGL D + LV Y+ + +AR
Sbjct: 58 SPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHAR 117
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
++FD + R + +W +I YA+ A+ L+ M+ G EP++ T L ACA
Sbjct: 118 RLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALL 177
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LE G +VH V + + LV MY K G + A+A+FD + R+ WN+MI+
Sbjct: 178 DLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIA 237
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGI 349
+G EAL L R + + P T V +SA A + GR++ G +R +
Sbjct: 238 AYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDR 297
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ K++ +VD+ + G V A L ++++ K ++V W A++ HG+ + A ++
Sbjct: 298 QDKLK--TSLVDMYAKSGWVQVARVLFEQLM-KRELVSWNAMICGYGMHGHFDEALKLFN 354
Query: 410 EI 411
++
Sbjct: 355 KM 356
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 7/203 (3%)
Query: 214 PNSVT-LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PNS SVL +C S L G ++H + + G +L T LV +Y G + A+
Sbjct: 59 PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
LFD MP+RN+ WN +I A G E A+ L+R + + P++ T+ L AC
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLD 178
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGC--MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
++ GR++ +RV G + + C +VD+ +CG V +A + R+ + D V+W +
Sbjct: 179 LETGREVH---ERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWNS 234
Query: 391 LLAACKNHGNIEVAERVVKEIIA 413
++AA +G A + +++ A
Sbjct: 235 MIAAYGQNGRPMEALSLCRDMAA 257
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 222/370 (60%), Gaps = 6/370 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSL-NPDKAIFLYMNMRRTGFAPNQHTFTFV 121
G L A RLF+ + N W T++ A A++ ++A+ + M R G APN +TF+ V
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC L +H K GLD D+ V + L+ Y DL+ R+VFDE+ R L
Sbjct: 189 LGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDL 245
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
VW ++I+G+AQS A+ LF +M GF N TL SVL AC LE G +VH
Sbjct: 246 VVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAH 305
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
V +E IL AL+ MY K G+L A+ALF MP+R++ +W+ MISGLA +G + EA
Sbjct: 306 VLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEA 363
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L +F ++ E + PN IT VGVL AC HAG ++ G F SMK+++GI+P+ EH+ CMVD
Sbjct: 364 LRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVD 423
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LLGR GK+ EA E I+ M +PD V+W LL AC+ H + +A +EI+ LEP++ G
Sbjct: 424 LLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGA 483
Query: 422 YVVLSNMYAE 431
V+LSN YA+
Sbjct: 484 RVLLSNTYAD 493
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 251/449 (55%), Gaps = 43/449 (9%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + L + H + Q + A++++ C + G ++A R+F + +PN + N
Sbjct: 20 CATFRDLLRAHGLAVRLCLSQSSYVATQIVHVC--NGHGRAAHAARVFAHVPAPNLHLHN 77
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRT--------GFA-PNQHTFTFVLKACSNVRSLNCCK 135
+I+A A + A+ +Y+ M R GF+ ++ T+ F+LKAC + + +
Sbjct: 78 AMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGR 137
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA--- 192
Q+H HV++SG + V N L+ Y+ DL+ AR+VFD +R + W T+IS +A
Sbjct: 138 QVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLISAHARMG 197
Query: 193 QSFRANE----------------------------ALMLFDQMLMEGFEPNSVTLASVLS 224
Q +A E A+ +F QM MEGFEP+ V++ +VL
Sbjct: 198 QMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLP 257
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
ACAQ G LELG ++ + G + AL+ MY K G + +A LF M E+++ +
Sbjct: 258 ACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEKDVIS 317
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
W+ I GLA+HG A EA+ LF +++E +++PN ITFVG+LSAC HAG +D G + F M
Sbjct: 318 WSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRYFDRM 377
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
K YG+EP +EHYGC+VDLLGR G++ A + I M PD +WG+LL+AC++H +++
Sbjct: 378 KEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLLSACRSHSDVDT 437
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEA 432
A + ++ LEP + G V+L+N+YA A
Sbjct: 438 AVVAAERLVELEPEDVGNLVMLANVYAAA 466
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 149/328 (45%), Gaps = 45/328 (13%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L+AC+ R L + H + L +V +V + +A +VF + L
Sbjct: 17 LRACATFRDL---LRAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAHVPAPNL 73
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS---------VTLASVLSACAQSGCL 232
++ MI YAQ+ +A+ ++ +ML +P+S T +L AC
Sbjct: 74 HLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAAS 133
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA------------------------ 268
+LG +VH V G E AI+ +L+ MYT+ G L+
Sbjct: 134 QLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLISAH 193
Query: 269 -------KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
KA+ LF SMP++ + +W A++SG + G A+++FR+++ E P+D++ V
Sbjct: 194 ARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIV 253
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
VL AC G +++GR I+ + +G+ KI ++++ +CG + EA +L M
Sbjct: 254 AVLPACAQLGALELGRWIYAYCNK-HGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSE 312
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVK 409
K DV+ W + HG A ++ +
Sbjct: 313 K-DVISWSTAIGGLAAHGRAREAVKLFE 339
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 166/431 (38%), Positives = 243/431 (56%), Gaps = 6/431 (1%)
Query: 8 LRQPPLPIPPLSLLADKCKSMHQLKQIHAQM-IISSRIQDHFAASRLLAFCALSSSGDLS 66
+R +P L L A +C + + HA + I DH S + + L D
Sbjct: 113 VRPDAYTLPFLLLAAARCPAPALARSAHALLEKIGLGDHDHTVHSLITMYSCLD---DHL 169
Query: 67 YATRLFNSIQSPNHFMWNTLIRA-QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A R+F+ I + WN++++A + + + + L + APN T VL AC
Sbjct: 170 AARRVFDGISHRDVVSWNSMVKAYERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTAC 229
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ +L + + V +G+++D + + LV Y ++ AR+VFD IR++ + W
Sbjct: 230 RDAGNLVLGRWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWN 289
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
MI+GYAQ+ +NEA+ LF M G P+ +TL VLS+CA G L+LG ++ + R
Sbjct: 290 AMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRR 349
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G +GTALV MY K G L KA +F MP +N A+WNA+I GLA +G +A+ F
Sbjct: 350 GLYNNVYVGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLAFNGRGYDAIQQF 409
Query: 306 RKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
+ E+ + P+DITF+GVLSAC HAG ++ GRQ+F S+ V+ I P+IEHY C+VDLL
Sbjct: 410 ELMRDEKGLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSCIVDLLA 469
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R G + EA + I+ M K D VM GALLAAC+ N EV ERV+ I+ LEP+N YVV
Sbjct: 470 RAGHLEEAWDFIEEMPGKVDAVMLGALLAACRKCKNTEVGERVINRIMKLEPSNSWNYVV 529
Query: 425 LSNMYAEAESM 435
S +YA ++ M
Sbjct: 530 SSKIYATSDKM 540
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 206/384 (53%), Gaps = 12/384 (3%)
Query: 24 KCKSMHQLKQIHAQMIISSRI---QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
+C+S+ +KQ+HA ++ S +HF + L C+ S+S L +S +P
Sbjct: 23 RCRSLASVKQLHAHILARSNSPFPYNHFLSKLLSLSCSASASAANYALL-LLSSHPAPTA 81
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRR--TGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
F +N IR ASS PD ++ L+++M R P+ +T F+L A + + + H
Sbjct: 82 FTYNVTIRLFASS-RPDTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAARCPAPALARSAH 140
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ K GL H V+ L+ YS D AR+VFD I +R + W +M+ Y ++
Sbjct: 141 ALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAYERAGMVA 200
Query: 199 EALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
E + M+ EG PN VTLA VL+AC +G L LG V +V+ G E+ +++G+AL
Sbjct: 201 EVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDSLIGSAL 260
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G +A+A+ +FD + +++ WNAMI+G A +G + EA+ LF + + + P+
Sbjct: 261 VGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLCPDK 320
Query: 318 ITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
IT VGVLS+C G + +G ++ +M+R G+ + +VD+ +CG + +A +
Sbjct: 321 ITLVGVLSSCAAVGALKLGVELDTYAMRR--GLYNNVYVGTALVDMYAKCGDLEKATHVF 378
Query: 377 KRMVWKPDVVMWGALLAACKNHGN 400
+M +K + W AL+ +G
Sbjct: 379 GKMPFKNE-ASWNALICGLAFNGR 401
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 244/420 (58%), Gaps = 16/420 (3%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRL 71
LP+P L L KC ++ +LKQI A I ++ + ++ + FC + + + +A +L
Sbjct: 24 LPLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQL 83
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F+ I PN ++NT+ R A +P + I + RR L+ S V++L
Sbjct: 84 FDQITQPNIVLFNTMARGYARLNDPLRMI---THFRR------------CLRLVSKVKAL 128
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
KQ+H K G+ +++VV L+ Y+ D++ +R+VFD+I + + +I
Sbjct: 129 AEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSL 188
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
A++ RANEAL LF ++ G +P VT+ VLS+CA G L+LG +H +VK GF+
Sbjct: 189 ARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYV 248
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+ T L+ MY K G+L A +F MP+R+ W+A+I A+HG +A+ + +++KE
Sbjct: 249 KVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKE 308
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
++ P++ITF+G+L AC H G ++ G + F M YGI P I+HYGCMVDLLGR G++ E
Sbjct: 309 KVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDE 368
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
A + I + KP ++W LL+AC HGN+E+ +RV++ I L+ ++ G YV+ SN+ A
Sbjct: 369 AYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCAR 428
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 247/420 (58%), Gaps = 12/420 (2%)
Query: 21 LADKCKSMHQLKQIHAQM--IISSRIQDHFAASRLLAFCALSSSGDLSYAT------RLF 72
L +C + L+ HA + + R+ FA S+LLA C + + + A LF
Sbjct: 24 LVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASCVSAPAPAAAQAAASSYARNLF 83
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSL 131
+ I P F +N+LIRA ++ A+ +Y M R G PN T F LKAC+ V +
Sbjct: 84 DQIPDPTAFCYNSLIRALPAA-GSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAP 142
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-NRTLNVWTTMISG 190
+Q+H + GL +V L+ Y+ + AR VFD + ++ L W+ M+SG
Sbjct: 143 GEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSG 202
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
Y++ NEAL LF +M G EP+ VT+ SV+SACA++G L+LG+ VH ++ +G +
Sbjct: 203 YSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVD 262
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
L TAL+ MY K G + +A+ +FD+M E++ W+AMI G A HG E+AL LF ++ +
Sbjct: 263 LELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLE 322
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
++ PN++TF+GVLSAC H+G ++ GR+ + M+ + GI+P +E+YGCMVDLL R G +
Sbjct: 323 LKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-GIKPSMENYGCMVDLLCRSGLLD 381
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+A + M P+ V+W LL ACK+ I++AE K ++ LEP+N YV+LSN+YA
Sbjct: 382 DAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYA 441
>gi|356502573|ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 503
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 156/437 (35%), Positives = 256/437 (58%), Gaps = 7/437 (1%)
Query: 1 MSLKCSSLRQPPLPIPPL--SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA 58
+S + L +P L + L + CK+ +K+ HAQ+++ QD F A+RL+
Sbjct: 4 VSRRVQQLLRPKLHKDSFYYTELLNLCKTTDNVKKAHAQVVVRGHEQDPFIAARLID--K 61
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
S +L +A ++F+++ P+ F N +I+ A++ +A+ +Y MR G PN +T+
Sbjct: 62 YSHFSNLDHARKVFDNLSEPDVFCCNVVIKVYANADPFGEALKVYDAMRWRGITPNYYTY 121
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
FVLKAC + + IH H K G+DLDL V N LV Y+ D+ +R+VFDEI +
Sbjct: 122 PFVLKACGAEGASKKGRVIHGHAVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPH 181
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF--EPNSVTLASVLSACAQSGCLELGE 236
R + W +MISGY + ++A++LF ML + P+ T +VL A AQ+ + G
Sbjct: 182 RDIVSWNSMISGYTVNGYVDDAILLFYDMLRDESVGGPDHATFVTVLPAFAQAADIHAGY 241
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H ++ + + +GT L+ +Y+ G + A+A+FD + +R++ W+A+I +HG
Sbjct: 242 WIHCYIVKTRMGLDSAVGTGLISLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHG 301
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
A+EAL LFR+L + P+ + F+ +LSAC HAG ++ G +F +M+ YG+ HY
Sbjct: 302 LAQEALALFRQLVGAGLRPDGVVFLCLLSACSHAGLLEQGWHLFNAME-TYGVAKSEAHY 360
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
C+VDLLGR G + +A E I+ M +P ++GALL AC+ H N+E+AE +++ L+P
Sbjct: 361 ACIVDLLGRAGDLEKAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDP 420
Query: 417 NNHGVYVVLSNMYAEAE 433
+N G YV+L+ MY +AE
Sbjct: 421 DNAGRYVILAQMYEDAE 437
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 237/449 (52%), Gaps = 46/449 (10%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C S + +IHA + +S QD A RL A ++SG L A L P +
Sbjct: 34 CASASRAAEIHAAAVRASVDQDKAVAFRLQR--AYAASGRLDLAVALLRRTPDPTAVFYT 91
Query: 85 TLIRAQASSLNPDKAIFLY--MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
+ I A +S A+ L M + R G P HT + L AC L + +H +
Sbjct: 92 SAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACG---CLAVGRALHGYAV 148
Query: 143 K------------------------------SGLDLDLHVVN--CLVRCYSVSSDLNNAR 170
K G+ D HVV+ ++ CY+ L++AR
Sbjct: 149 KLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDAR 208
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
+FD + + L W M+ GY Q R +EAL LF QML G EP+ V++ LSA AQ G
Sbjct: 209 GLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLG 268
Query: 231 CLELGEKVHVFVKMRG----FEMGAILGTALVHMYTKNGALAKAKALFDSMP---ERNIA 283
E G +H FV G + A +GTALV MY K G+L +A A+F + +R++
Sbjct: 269 TAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVV 328
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
WNAMI+G A HG + EAL+ F +L + + P DITF+GVL+AC H+G +D GR +F +M
Sbjct: 329 AWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAM 388
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ YGI PK+EHYGCMVDLLGR G+V EA +L++ M KPD MW +LL AC+ H N+ +
Sbjct: 389 EEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLAL 448
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+RV ++ N G YV+LSNMYA A
Sbjct: 449 GQRVADYLVGNGLANSGTYVLLSNMYAAA 477
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 245/430 (56%), Gaps = 15/430 (3%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P I S L D +H +Q H Q +I D F +S L+ S G+L A L
Sbjct: 156 PCAIKSCSALLD----LHSGRQAHQQALIFGFEPDLFVSSALVDM--YSKCGELRDARTL 209
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN--MRRTGFAPNQHT------FTFVLK 123
F+ I N W ++I + + +A+ L+ + +G + VL
Sbjct: 210 FDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLS 269
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
ACS V + + +H + K G + DL V N L+ Y+ +L +R+VFD + R +
Sbjct: 270 ACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVIS 329
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W ++I+ YAQ+ + E++ +F +M+ +G N+VTL++VL ACA SG LG+ +H V
Sbjct: 330 WNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQV 389
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G E +GT+++ MY K G + A+ FD M E+N+ +W+AM++G HGHA+EAL
Sbjct: 390 IKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEAL 449
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
++F ++ + PN ITFV VL+AC HAG ++ G F +M + +EP +EHYGCMVDL
Sbjct: 450 EVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDL 509
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G + EA +LIK M +PD V+WGALL AC+ H N+++ E +++ L+P N G Y
Sbjct: 510 LGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYY 569
Query: 423 VVLSNMYAEA 432
V+LSN+YA+A
Sbjct: 570 VLLSNIYADA 579
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 200/361 (55%), Gaps = 14/361 (3%)
Query: 69 TRLFNS-IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
T LFN + N F WN++I A S + +A+ + +MR+ PN+ TF +K+CS
Sbjct: 105 TTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSA 164
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ L+ +Q H G + DL V + LV YS +L +AR +FDEI +R + WT+M
Sbjct: 165 LLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 224
Query: 188 ISGYAQSFRANEALMLFDQMLME--GFEPNS------VTLASVLSACAQSGCLELGEKVH 239
I+GY Q+ A+ AL+LF + L+E G E + + + SVLSAC++ + E VH
Sbjct: 225 ITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVH 284
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
F+ RGFE + L+ Y K G L ++ +FD M ER++ +WN++I+ A +G +
Sbjct: 285 GFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMST 344
Query: 300 EALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
E++++F ++ K+ +I N +T VL AC H+G +G+ I + ++ G+E +
Sbjct: 345 ESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM-GLESNVFVGTS 403
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE--IIALEP 416
++D+ +CGKV A + RM K +V W A++A HG+ + A V E + ++P
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMREK-NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 462
Query: 417 N 417
N
Sbjct: 463 N 463
>gi|357511223|ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500915|gb|AES82118.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 467
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/417 (39%), Positives = 243/417 (58%), Gaps = 4/417 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS-IQ 76
+ LL C++ +KQI AQ+II + +Q H + L A S L+Y + LF I
Sbjct: 13 VKLLKSFCRTQIHVKQIQAQIIIHN-LQSHTTIAEHL-ITASQSHNLLNYVSPLFTHLIP 70
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
P+ F++N+LIRA + S P+ + LY +M + PN TF F+ K+ S+ +
Sbjct: 71 KPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQSQC 130
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
++THV K G D++V N L+ Y+ L RQ+FDE+ R + WT MI GY +
Sbjct: 131 VYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGK 190
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
N+AL++F+QM G PN VT+ + LSACA S +E+G + V+ G+E+ ILGTA
Sbjct: 191 YNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTA 250
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ MY K G + + +F M E+N+ T N +I GLA EEAL F ++E + + +
Sbjct: 251 LIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDGVRAD 310
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
++T V VLSAC H+G ++ GR IF + YG P ++HY CMVDLL R G++ EA ++
Sbjct: 311 EVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDI 370
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
IK M ++P MWG+LL K+ ++E +E +++ LEP N YV LSN+YAEA
Sbjct: 371 IKCMPFEPTAAMWGSLLLGSKSRDDLEFSEFAATKLVELEPYNTAYYVQLSNLYAEA 427
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/404 (39%), Positives = 242/404 (59%), Gaps = 5/404 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+ + ++HA+++ + A RLL CA S+ LSYA +F+ I P+ F +NT+I
Sbjct: 1 MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
RA A S L+ M G +P+ TF FVLKAC+ +++ +H+ + K G D
Sbjct: 61 RAHADSSPSFSLS-LFSKMTMAGVSPDHFTFPFVLKACARLQT---GLDLHSLLFKLGFD 116
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D++V N L+ Y L+ A + F+E+ R L W++MI+ +A++ EAL LF +M
Sbjct: 117 SDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRM 176
Query: 208 LMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+ G +P+ V + SV+SA + G LELG+ + F+ G E LGTALV M+++ G
Sbjct: 177 QLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGC 236
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ ++ +FD M ERN+ TW A+I+GLA HG + EAL +F ++ P+ +TF GVL A
Sbjct: 237 IEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVA 296
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G + G +F S++ YG+EP EHYGCMVDLLGR G + EA + + M +P+ +
Sbjct: 297 CSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSI 356
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+W LL AC NH IE+AE+V ++I L+ + G YV+LSN+Y
Sbjct: 357 IWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYG 400
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 247/420 (58%), Gaps = 12/420 (2%)
Query: 21 LADKCKSMHQLKQIHAQM--IISSRIQDHFAASRLLAFCALSSSGDLSYAT------RLF 72
L +C + L+ HA + + R+ FA S+LLA C + + + A LF
Sbjct: 73 LVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLASCVSAPAPAAAQAAASSYARNLF 132
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSL 131
+ I P F +N+LIRA ++ A+ +Y M R G PN T F LKAC+ V +
Sbjct: 133 DQIPDPTAFCYNSLIRALPAA-GSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAP 191
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-NRTLNVWTTMISG 190
+Q+H + GL +V L+ Y+ + AR VFD + ++ L W+ M+SG
Sbjct: 192 GEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSG 251
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
Y++ NEAL LF +M G EP+ VT+ SV+SACA++G L+LG+ VH ++ +G +
Sbjct: 252 YSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVD 311
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
L TAL+ MY K G + +A+ +FD+M E++ W+AMI G A HG E+AL LF ++ +
Sbjct: 312 LELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLE 371
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
++ PN++TF+GVLSAC H+G ++ GR+ + M+ + GI+P +E+YGCMVDLL R G +
Sbjct: 372 LKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-GIKPSMENYGCMVDLLCRSGLLD 430
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+A + M P+ V+W LL ACK+ I++AE K ++ LEP+N YV+LSN+YA
Sbjct: 431 DAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYA 490
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/418 (37%), Positives = 237/418 (56%), Gaps = 10/418 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAF---CALSSSGDLSYATRLFNSIQSPNHFM--WNTL 86
KQ+H + + + + F + L++ C+L + A +LF+ +N+L
Sbjct: 30 KQLHCHVFKTGCLLEPFVQTSLISMYGKCSL-----IDNARKLFDENPQSRKLTVCYNSL 84
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
+ A + + L+ MR G N T +++ C +L +H K GL
Sbjct: 85 LSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGL 144
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D+D V NCL+ Y S +++ R++FDE+ + L W MI+GYAQ+ AN L L+ +
Sbjct: 145 DMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKE 204
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M +GF P+ +TL VLS+CA G L +G++V ++ GF L ALV+MY + G
Sbjct: 205 MESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGN 264
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L KA+ +FD MP +++ +W A+I G HG E A+ LF ++ + I P+ FV VLSA
Sbjct: 265 LKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSA 324
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG + G FG M+R YG+ P EHY CMVDLLGR G++ EA ELI+ M + D
Sbjct: 325 CSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGA 384
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLV 444
+WGALL ACK H N+E+AE +++I LEP N G YV+LSN+Y EA +++ L + ++
Sbjct: 385 LWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRML 442
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 184/334 (55%), Gaps = 24/334 (7%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M R+G +PN TF F +K+C+ + KQ+H HV K+G L+ V L+ Y S
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 166 LNNARQVFDE-IRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
++NAR++FDE ++R L V + +++SGYA + R + ++LF +M G E N VT+ ++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
C G L LG VH F G +M + +G L+ MY K+G + + LFD MP + +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
TWNAMI+G A +G A L+L++++E + P+ +T VGVLS+C H G + VG++
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKE----- 235
Query: 344 KRVYGIEPKIEHYG---------CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+E K+E +G +V++ RCG + +A ++ M K VV W A++
Sbjct: 236 -----VERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVK-SVVSWTAIIGG 289
Query: 395 CKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
HG EVA + E+I ++P+ VLS
Sbjct: 290 YGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLS 323
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G+L A +F+ + + W +I + A+ L+ M R G P+ F
Sbjct: 260 ARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFV 319
Query: 120 FVLKACSNVRSLN-CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
VL ACS+ N K GL +C+V + LN AR++ + ++
Sbjct: 320 SVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQV 379
Query: 179 RTLN-VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS-ACAQSGCLELGE 236
R +W ++ A + F+Q++ EP + +LS ++G LE
Sbjct: 380 RADGALWGALLGACKIHRNVELAELAFEQVIE--LEPTNTGYYVLLSNVYTEAGNLEGIL 437
Query: 237 KVHVFVKMR 245
+V + ++ R
Sbjct: 438 RVRMLMRKR 446
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 250/450 (55%), Gaps = 34/450 (7%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
P L A + S+ + +H I S+ D F A+ L+ C S GDL A ++F +
Sbjct: 136 FPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLI-HCYFSC-GDLDSACKVFTT 193
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I+ + WN++I +PDKA+ L+ M + T VL AC+ +R L
Sbjct: 194 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFG 253
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA-- 192
+++ +++ ++ ++++L + N ++ Y+ + +A+++FD + + WTTM+ GYA
Sbjct: 254 RRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 313
Query: 193 -----------------------------QSFRANEALMLFDQM-LMEGFEPNSVTLASV 222
Q+ + NEAL++F ++ L + + N +TL S
Sbjct: 314 EDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVST 373
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSACAQ G LELG +H ++K G +M + +AL+HMY+K G L KA+ +F+S+ +R++
Sbjct: 374 LSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDV 433
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
W+AMI GLA HG EA+D+F K+++ + PN +TF V AC H G +D +F
Sbjct: 434 FVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYK 493
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+ YGI P+ +HY C+VD+LGR G + +A + I+ M P +WGALL ACK H N+
Sbjct: 494 MESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLS 553
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+AE ++ LEP N G +V+LSN+YA++
Sbjct: 554 LAEMACTRLLELEPRNDGAHVLLSNIYAKS 583
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 222/413 (53%), Gaps = 36/413 (8%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L D+C S+ QLKQ HA MI + D ++AS+L A ALSS L YA ++F+ I PN
Sbjct: 37 LIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNS 96
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNM--RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
F WNTLIRA AS +P +I+ +++M + PN++TF F++KA + V SL+ + +H
Sbjct: 97 FTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 156
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
KS + D+ V N L+ CY DL++A +VF I+ + + W +MI+G+ Q +
Sbjct: 157 GMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 216
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
+AL LF +M E + + VT+ VLSACA+ LE G +V +++ + L A++
Sbjct: 217 KALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAML 276
Query: 259 HMYTKNGALAKAKALFD-------------------------------SMPERNIATWNA 287
MYTK G++ AK LFD +MP+++I WNA
Sbjct: 277 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNA 336
Query: 288 MISGLASHGHAEEALDLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+IS +G EAL +F +L+ ++ I N IT V LSAC G +++GR I +K+
Sbjct: 337 LISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKK- 395
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
GI+ ++ + +CG + +A E+ V K DV +W A++ HG
Sbjct: 396 NGIKMNFYVTSALIHMYSKCGDLEKAREVFNS-VEKRDVFVWSAMIGGLAMHG 447
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 249/458 (54%), Gaps = 36/458 (7%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYA 68
Q L + L D C +++Q+KQIH ++ Q + ++L+ L D YA
Sbjct: 44 QKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYA 102
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R+ +Q N F+W +IR A D+AI +Y MR+ P TF+ +LKAC +
Sbjct: 103 RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR--------- 179
+ LN +Q H + ++V N ++ Y ++ AR+VFDE+ R
Sbjct: 163 KDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELI 222
Query: 180 ----------------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
+ WT M++G+AQ+ + EAL FD+M G + V
Sbjct: 223 AAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEV 282
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMG--AILGTALVHMYTKNGALAKAKALFD 275
T+A +SACAQ G + ++ + G+ ++G+AL+ MY+K G + +A +F
Sbjct: 283 TVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFM 342
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFID 334
SM +N+ T+++MI GLA+HG A+EAL LF + + +I PN +TFVG L AC H+G +D
Sbjct: 343 SMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD 402
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
GRQ+F SM + +G++P +HY CMVDLLGR G++ EA ELIK M +P +WGALL A
Sbjct: 403 QGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA 462
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
C+ H N E+AE + + LEP+ G Y++LSN+YA A
Sbjct: 463 CRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASA 500
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 235/434 (54%), Gaps = 39/434 (8%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAF---CALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
+++HA ++ + F + LL F C L G ++F+ ++ P +W +IR
Sbjct: 111 EEVHASVVRTGFACSEFVSGALLGFYVACGLVGKG-----RQVFDEMRQPGLVLWTLIIR 165
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
A P+KA+ L+ MR G P+ + V+ AC + L K +H + KSG+++
Sbjct: 166 AYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEV 225
Query: 149 DLHVVNCLVRCYSVSSDLNNA-------------------------------RQVFDEIR 177
D V + L+ Y L+ A +Q+F +
Sbjct: 226 DAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMP 285
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+R + W +MI G+A+ + EAL F +M G PN++TL S LSACA G L+ G
Sbjct: 286 DRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAW 345
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +V L ++L+ MY+K G + KA +F+ R++ TW +++ GLA HG
Sbjct: 346 IHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGR 405
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E+AL F K+++ Q+ P+D+T VGVLSAC HAG +D G F SM++V+G+ PK+EHYG
Sbjct: 406 GEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYG 465
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLLGR G + EA +LI M + + ++WGA L+AC+ H N+E+ E + ++ L+P
Sbjct: 466 CMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPR 525
Query: 418 NHGVYVVLSNMYAE 431
+ V+LSNMYAE
Sbjct: 526 DPWARVMLSNMYAE 539
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 193/434 (44%), Gaps = 69/434 (15%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
R P L S + ++L +IH I + ++D AASRL CA
Sbjct: 7 RFPQLSHTRFSFRLHPLTNPNKLPRIHGNTIAT--VEDPSAASRL--DCA---------- 52
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASS--LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
N F+WNT+IR Q + + D + YM R G PN HTF ++LKA
Sbjct: 53 ----------NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALV 102
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
+ + + +++H V ++G V L+ Y + RQVFDE+R L +WT
Sbjct: 103 SGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTL 162
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
+I Y +AL LF M G P+ V +++V+SAC G L + + +H F++ G
Sbjct: 163 IIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSG 222
Query: 247 FEMGAILGTALVHMYTKNGALAKA-------------------------------KALFD 275
E+ A + + L+ Y + G+L A K LF
Sbjct: 223 IEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQ 282
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
SMP+R++ +WN+MI G A G +EAL F ++E + PN +T + LSAC G +D
Sbjct: 283 SMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDT 342
Query: 336 GRQIFG-----SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G I M R ++ ++D+ +CG + +A ++ + + D+ W +
Sbjct: 343 GAWIHAYVDKNDMNRDGSLDSS------LIDMYSKCGDIDKAVQIFEEST-RRDLFTWTS 395
Query: 391 LLAACKNHGNIEVA 404
++ HG E A
Sbjct: 396 IVCGLAMHGRGEKA 409
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 183 VWTTMISGYAQS--FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
VW TMI ++ + L+ + Q L G PN T +L A ++ GE+VH
Sbjct: 56 VWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHA 115
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
V GF + AL+ Y G + K + +FD M + + W +I E+
Sbjct: 116 SVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEK 175
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL+LFR + + + P+ + V+SAC G + V + + +++ GIE ++
Sbjct: 176 ALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKS-GIEVDAFVSSTLI 234
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
G CG + A + K ++V+W ++ H N+E+ +++ + +
Sbjct: 235 STYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSM 284
>gi|326513504|dbj|BAJ87771.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524908|dbj|BAK04390.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/484 (36%), Positives = 262/484 (54%), Gaps = 56/484 (11%)
Query: 11 PPLPIPPLSL--LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA----FCALSSSGD 64
PP P +L L+ +C + H L+ IH ++ + A LA F A+S +GD
Sbjct: 2 PPTSTSPENLVALSARCSTKHDLRLIHGALLRRRHLLPAADAFAALAKLLRFAAVSPAGD 61
Query: 65 LSYATRLFN-------SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
L A + + S S F +NTL+R A+S +P AI L+ MRR G AP+ T
Sbjct: 62 LRQAAAILSAHLPFISSASSHPAFFYNTLMRGLAASSSPGDAIGLFAAMRRAGAAPDAFT 121
Query: 118 FTFVLKACSNVRS-LNCCKQIHTHVSKSG----LDLDLHVVNCLVRCYSV---------- 162
FTFVLK+CS S +H + G L HV N L+ Y+
Sbjct: 122 FTFVLKSCSRCPSGRRLPSDLHAQAIRHGCLGELSAHTHVHNALLHAYACRAAVDDACRV 181
Query: 163 ---------------------SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
++DL+ AR VFD++ +R + WT MIS YA++ R EAL
Sbjct: 182 FEEIPVRDVVSFSGLLTAHLKANDLHAARLVFDQMPHRDVVSWTAMISAYAKACRPQEAL 241
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
LFD M M+ P+ VT+ S++SAC G L GE+V + GF L AL+ MY
Sbjct: 242 ALFDAMPMQ---PDEVTMVSIVSACTTLGDLATGERVRRHIDSLGFGWMVSLRNALMDMY 298
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EKEQIVPNDIT 319
K G+L +A+ALFD M R++A+WN +IS ASHG + + +F ++ E + P+ +T
Sbjct: 299 AKCGSLPEARALFDGMTVRSLASWNTLISAYASHGDLDNTIAVFYQMLAEGNTVKPDGVT 358
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRV-YG-IEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+ +L A H G ++ GR +F +M+R +G +E +EHYGC+VD+LGR GK+ EA ++I+
Sbjct: 359 LLALLIAYTHKGCVEEGRAMFNAMQRGNFGKVELTVEHYGCVVDMLGRAGKLEEAYQVIE 418
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKM 437
+M + V+WGALL AC+ HG+I++AER VKE+ L P G Y++LS+MYA A +
Sbjct: 419 QMPIPSNAVIWGALLGACRTHGDIDMAERAVKELRNLNPEEGGYYILLSDMYASAGRIAE 478
Query: 438 QLEI 441
EI
Sbjct: 479 ATEI 482
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 246/412 (59%), Gaps = 11/412 (2%)
Query: 28 MHQLKQIHAQMIIS----SRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
M Q+ QI AQ+I S S + + A +L+ CA ++ A +F + SPN F
Sbjct: 1 MAQVLQIQAQLITSPIPSSVVDPNLIAVKLIGACA--DHANVRQAALIFAHLASPNIFAH 58
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF--VLKACSNVRSLNCCKQIHTHV 141
N ++A A + + AI + + + APN FTF VLKAC+ + + ++IH V
Sbjct: 59 NATLKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMV 118
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE--IRNRTLNVWTTMISGYAQSFRANE 199
+K G + +L V N L+ Y + L AR +FDE +R+R + W MI+GYAQ+ + ++
Sbjct: 119 TKQGFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSD 178
Query: 200 ALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
A+ +F M G PN VTL SVL ACA G L+LG+ + F+ R +G LG AL
Sbjct: 179 AIEVFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALA 238
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY K G + +A+ +F+ M ER++ +W+ +I GLA +GHA+EA F ++ PND+
Sbjct: 239 DMYAKCGCITEARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDV 298
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
F+G+L+AC HAG + G F +M + YG+ PK+EHYGC+VDLL R G++ +AE++I
Sbjct: 299 VFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISS 358
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
M KP+V++WGALL C+ + + +RVV+ I+ L+ ++ G YV L+N+Y+
Sbjct: 359 MPMKPNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYS 410
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 231/356 (64%), Gaps = 10/356 (2%)
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-NQHTFTFVLKACSNVRSLNCCKQIHTH 140
MWNT+IR + S NP +AI LYM+M G AP N TF F+L +C+ + SL ++H+H
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ K G + DL V N L+ YSV +LN AR +FDE R L + TMI GYA+ + A
Sbjct: 61 IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 120
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV-HVFVKMRGFEMGAILGTALVH 259
L LF +M + VTL +VLSACA+ G +LG+++ H +++ F IL A++
Sbjct: 121 LCLFGEMQ----NSDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMD 176
Query: 260 MYTKNGALAKAKALFDSMPERNIAT---WNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
MY K G++ A +F + +N+ T +N+MI+GLA HG E A+ +FR+L + P+
Sbjct: 177 MYAKCGSIDSALEIFRRVG-KNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPD 235
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
++TFVGVL AC H+G I+ G+++F SM YGI+P++EHYGCMVDLLGR G + EA +L+
Sbjct: 236 EVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLV 295
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
++M ++ + V+W ALL+AC+ HGN+++ E ++++ +E + YV+LSN+ A+A
Sbjct: 296 QKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADA 351
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 22/298 (7%)
Query: 16 PP----LSLLADKCKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
PP L + C + L+ ++H+ +I D F + L+ S G+L+ A
Sbjct: 32 PPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHL--YSVFGNLNLA 89
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
LF+ + +NT+I+ A P+ A+ L+ M+ + ++ T VL AC+ +
Sbjct: 90 RTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNS----DEVTLVAVLSACARL 145
Query: 129 RSLNCCKQIHTHVSKSGL-----DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
+ + K+++ ++G+ L V++ +C S+ S L R+V + +T V
Sbjct: 146 GAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNM--KTGFV 203
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV-HVFV 242
+ +MI+G AQ A+ +F +++ G +P+ VT VL AC SG +E G+K+
Sbjct: 204 FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMF 263
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAE 299
G + +V + + G L +A L MP E N W A++S +HG+ +
Sbjct: 264 NAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVK 321
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 253/482 (52%), Gaps = 54/482 (11%)
Query: 2 SLKCSSLRQ----PPLPIP--------------PLSLLADKCKSMHQLKQIHAQMIISSR 43
SL C SL+Q P P P + D CK++ Q+KQ+HA+++++
Sbjct: 15 SLACISLKQFPQNPQKPTPFYQIQQQQPKQLESQIVTTLDGCKNLTQIKQVHARILLNGL 74
Query: 44 IQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFL 102
Q + ++L+ L+ D Y +FN + PN F++N LIR ++
Sbjct: 75 DQSCYVLAKLIRTLTKLNIPVD-PYPLSIFNQVNYPNPFLYNALIRGYLIEERLKESTEF 133
Query: 103 YMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH-VSKSGLDLDLHVVNCLVRCYS 161
Y MR+ G P TFT + KAC + +QIH + G DLHV N ++ Y
Sbjct: 134 YSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYI 193
Query: 162 VSSDLNNARQVFDEIRNRT-------------------------------LNVWTTMISG 190
L R+VFDE+ NR + WT M+SG
Sbjct: 194 KCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSG 253
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF--E 248
+AQ+ + EA+M F++M G E + +TL V+SACAQ G + + + + F +
Sbjct: 254 FAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGK 313
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
++G+AL+ MY+K G++ A +F M ERN+ ++++MI G A HG +A+ LF ++
Sbjct: 314 HSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEM 373
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
K +I PN +TF+GVL+AC HAG ++ G QIF M++ YGI+P +HY CMVDLLGR G+
Sbjct: 374 VKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGR 433
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EA EL+K M +P +WGALL AC+ H + ++A + LEP G Y++L+N+
Sbjct: 434 LQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANI 493
Query: 429 YA 430
YA
Sbjct: 494 YA 495
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 234/407 (57%), Gaps = 4/407 (0%)
Query: 30 QLKQIHAQMIISSRIQ-DHFAASRLLAFCAL---SSSGDLSYATRLFNSIQSPNHFMWNT 85
+L +H II IQ F +L + + G + A +F+ ++ N W+
Sbjct: 143 KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSA 202
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I A KA+ L+ M +G P++ T +L ACS++++L + IH V K G
Sbjct: 203 MIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFG 262
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
LDLD V LV Y ++ +AR +FD++ R L WT MI GYA+ ANE+L+LFD
Sbjct: 263 LDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFD 322
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EG P+ V + +V+ ACA+ G + + +++ + F++ ILGTA++ M+ K G
Sbjct: 323 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 382
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ A+ +FD M E+N+ +W+AMI+ HG +ALDLF + + I+PN IT V +L
Sbjct: 383 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 442
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC HAG ++ G + F M Y + ++HY C+VDLLGR G++ EA +LI+ M + D
Sbjct: 443 ACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE 502
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGA L AC+ H ++ +AE+ ++ L+P N G Y++LSN+YA A
Sbjct: 503 GLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANA 549
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 173/300 (57%), Gaps = 6/300 (2%)
Query: 103 YMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV 162
+ + R G P+ +T FV++AC ++++L + IH V K GLDLD V LV Y
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
++ +AR +FD+++ R L WT MI GYA+ +ANE+L+LF++M EG P+ V + +V
Sbjct: 78 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
+ ACA+ G + + +++ + F++ ILGTA++ MY K G + A+ +FD M E+N+
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 197
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
+W+AMI+ HG +ALDLFR + ++P+ IT +L AC + +GR I
Sbjct: 198 ISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHI 257
Query: 343 MKRVYGIEPKIEHYGC--MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
VY ++H+ C +VD+ G+C ++ +A L +M + D+V W ++ GN
Sbjct: 258 ---VYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVMIGGYAECGN 313
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 182/355 (51%), Gaps = 4/355 (1%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
DHF + L+ ++ A LF+ +Q + W +I A ++++ L+
Sbjct: 64 DHFVCAALVDM--YVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 121
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
MR G P++ V+ AC+ + +++ + I ++ + LD+ + ++ Y+
Sbjct: 122 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 181
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ +AR++FD + + + W+ MI+ Y + +AL LF ML G P+ +TLAS+L A
Sbjct: 182 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYA 241
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C+ L++G +H V G ++ + ALV MY K + A+ LFD MPER++ TW
Sbjct: 242 CSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTW 301
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
MI G A G+A E+L LF K+ +E +VP+ + V V+ AC G + R I ++R
Sbjct: 302 TVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR 361
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ + M+D+ +CG V A E+ RM K +V+ W A++AA HG
Sbjct: 362 -KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYHGQ 414
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 229/405 (56%), Gaps = 31/405 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L S G+ A ++F+ + WN+LI P +A+ +Y M P++ T
Sbjct: 199 LVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTM 258
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
V+ AC+ + SL ++IH ++ +SGL+L + +VN L+ Y DL + +FD +R
Sbjct: 259 IGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRK 318
Query: 179 RTLNVWTTMISGYAQS----------------------------FRAN---EALMLFDQM 207
+T+ WTTMI GYA++ +AN EAL LF +M
Sbjct: 319 KTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREM 378
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+P+ VT+ LSAC+Q G L+ G H ++K + LGTAL+ MY K G +
Sbjct: 379 QWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNM 438
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
KA +F+ MP RN TW A+I GLA +G+ +A+ F K+ ++P++ITF+GVL+AC
Sbjct: 439 TKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTAC 498
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
CH G ++ GR+ F MK + + P+ +HY CMV+LLGR G + EAEELIK M + D ++
Sbjct: 499 CHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMV 558
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WGAL AC H N+ + ER +++ L+P++ G+YV+L+NMY EA
Sbjct: 559 WGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREA 603
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 223/421 (52%), Gaps = 35/421 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL + CKS QLKQI AQMI++ I D FA+SRL++FCA+S S +L Y ++ N++
Sbjct: 55 PLLSLL-ENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNL 113
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCC 134
Q+PN F WN +IR S NP K + LY M R G P+ +T++F+ K C+N+
Sbjct: 114 QNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMG 173
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+I V K G D D+++ N ++ + A +VFDE R L W ++I+GY +
Sbjct: 174 FEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRR 233
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+ EA+ ++ QM+ E +P+ VT+ V+SACAQ L+LG ++H +++ G + L
Sbjct: 234 RQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLV 293
Query: 255 TALVHMYTKNGALAKAKALFDS-------------------------------MPERNIA 283
AL+ MY K G L K LFD+ MPE+N+
Sbjct: 294 NALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVV 353
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
WNAMI + EAL+LFR+++ + P+ +T + LSAC G +D G +
Sbjct: 354 AWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYI 413
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
K+ + + + ++D+ +CG + +A ++ M + + + W A++ +GN+
Sbjct: 414 KK-HNLSLDVALGTALIDMYAKCGNMTKALQVFNEMP-RRNSLTWTAIIGGLALYGNVND 471
Query: 404 A 404
A
Sbjct: 472 A 472
>gi|297791497|ref|XP_002863633.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309468|gb|EFH39892.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 460
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 246/422 (58%), Gaps = 18/422 (4%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L KCKS+ LKQIHAQ+I + S+LL LSS+ LSYA + I +P+
Sbjct: 15 LIPKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLH---LSSTVCLSYALSILRQIPNPSV 71
Query: 81 FMWNTLIRAQASSLNPDK---AIFLY---MNMRRTGFAPNQHTFTFVLKACS-NVRSLNC 133
F++NTLI + S+ N + A LY ++ R PN+ T+ + KA +
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFETKWHRH 131
Query: 134 CKQIHTHVSK--SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ +H HV K ++ D V LV Y+ +L AR + + IR L W T+++ Y
Sbjct: 132 GRALHAHVLKFIEPVNHDRFVQAALVGFYANCGELREARSLLERIREPDLATWNTLLAAY 191
Query: 192 AQSFRAN---EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
A S E L LF +M + PN ++L +++ +CA G G HV++ +
Sbjct: 192 ANSEETESDEEVLKLFVRMQVR---PNELSLVALIKSCANLGEFWGGVWAHVYLLKKNLT 248
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+ +GT+L+ Y+K G L+ A+ +FD M ER+I+ +NAMI GLA HG +E ++L+ L
Sbjct: 249 LNQFVGTSLIDFYSKCGCLSFARQVFDEMSERDISCFNAMIRGLAVHGFGQEGIELYNSL 308
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ +VP++ TFV +SAC H+G +D G QIF SMK VYGIEPK+EHYGC+VDLLGR G+
Sbjct: 309 ISQGLVPDNATFVVTISACSHSGLVDEGLQIFHSMKTVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EAEE IK+M KP+ +W + L + + HG++E E +K+++ LE N G YV+LSN+
Sbjct: 369 LEEAEECIKKMPMKPNATLWRSFLGSAQIHGDLERGEIALKQLLGLEFENSGNYVLLSNI 428
Query: 429 YA 430
YA
Sbjct: 429 YA 430
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 236/409 (57%), Gaps = 8/409 (1%)
Query: 27 SMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSI-QSPNHFMWN 84
S+ +KQ+HA+ + + H A LL A + L YA + + P+ F N
Sbjct: 31 SLATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAPPLRYAVAVLTRVLPDPDPFSLN 90
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
T++R ASS P A+ L+ RR P+ HT+ +L+AC+ + SL ++IH +K+
Sbjct: 91 TVLRIAASSSRPSLALALHA--RRLA-PPDTHTYPPLLQACARLLSLRHGERIHAEAAKN 147
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRANEALM 202
GL + V N LV Y +A +VFDEI R L W +M++G+A + R NE L
Sbjct: 148 GLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSMLNGFAANGRPNEVLT 207
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
+F +ML F P+ T+ SVL+A A+ G L LG +VHV++ G + +G AL+ +Y
Sbjct: 208 IFREMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGNALIDLYA 267
Query: 263 KNGALAKAKALFDSM-PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + A+ +F+ M R + +W ++I GLA +G +EAL+LF +E+E++VP +IT V
Sbjct: 268 KCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMV 327
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL AC H G +D G F MK Y I P+IEH GCMVDLLGR GKV EA + I M
Sbjct: 328 GVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPL 387
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+P+ V+W LL AC H +E+ E ++ L+P + G YV+LSN+YA
Sbjct: 388 EPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYA 436
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 243/450 (54%), Gaps = 33/450 (7%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
PPL + KS+ + +IH D F + L+ A + G ++ A +F+
Sbjct: 125 FPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYA--ACGRIAEARLMFDK 182
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ + W+ +I S + A+ L+ M+ P++ + VL AC +L+
Sbjct: 183 MFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYG 242
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN--------------------------- 167
K IH + ++ + +D H+ + LV Y+ ++
Sbjct: 243 KMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKL 302
Query: 168 ----NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
NAR VF+++ + L W+ MISGYA+S EAL LF++M G +P+ VT+ SV+
Sbjct: 303 GQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVI 362
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
+ACA G L+ + +H+FV GF + AL+ MY K G+L +A+ +FD MP +N+
Sbjct: 363 TACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVI 422
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+W MIS A HG A AL F ++E E I PN ITFVGVL AC HAG ++ GR+IF SM
Sbjct: 423 SWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSM 482
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ I PK HYGCMVDL GR + EA EL++ M P+V++WG+L+AAC+ HG IE+
Sbjct: 483 INEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIEL 542
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
E K ++ L+P++ G +V LSN+YA+A
Sbjct: 543 GEFAAKRLLELDPDHDGAHVFLSNIYAKAR 572
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 219/425 (51%), Gaps = 38/425 (8%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRL-LAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
S+ LKQ+HAQ++ S + +L ++ CALSSS L YA +FN I P + N
Sbjct: 35 SLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSS--LDYALSVFNLIPKPETHLCNR 92
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+R + S P+K + +Y MR G A ++ +F +LKA S V+SL +IH +K G
Sbjct: 93 FLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLG 152
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D D V LVR Y+ + AR +FD++ +R + W+ MI GY QS N+AL+LF+
Sbjct: 153 FDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFE 212
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM----- 260
+M EP+ + L++VLSAC ++G L G+ +H F+ + L +ALV M
Sbjct: 213 EMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCG 272
Query: 261 --------------------------YTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
Y+K G + A+++F+ M ++++ W+AMISG A
Sbjct: 273 SMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAE 332
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
+EAL+LF +++ I P+ +T + V++AC H G +D + I + + G +
Sbjct: 333 SDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDK-NGFGGALP 391
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA- 413
++++ +CG + A + +M K +V+ W +++A HG+ A R ++
Sbjct: 392 INNALIEMYAKCGSLERARRIFDKMPRK-NVISWTCMISAFAMHGDAGSALRFFHQMEDE 450
Query: 414 -LEPN 417
+EPN
Sbjct: 451 NIEPN 455
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 159/329 (48%), Gaps = 8/329 (2%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV-VNCLVRCYSVSSDLNNARQVFD 174
H+ + A S+ SL KQ+H + +S LD + V ++ ++SS L+ A VF+
Sbjct: 21 HSHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFN 80
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
I ++ + ++S + L+++++M +G + + +L A ++ L
Sbjct: 81 LIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVE 140
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G ++H GF+ + T LV MY G +A+A+ +FD M R++ TW+ MI G
Sbjct: 141 GLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQ 200
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKI 353
G +AL LF +++ + P+++ VLSAC AG + G+ I M+ ++P +
Sbjct: 201 SGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHL 260
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
+ +V + CG + A L ++M K ++V A++ G IE A V +++
Sbjct: 261 Q--SALVTMYASCGSMDLALNLFEKMTPK-NLVASTAMVTGYSKLGQIENARSVFNQMV- 316
Query: 414 LEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
+ + + + YAE++S + L +
Sbjct: 317 --KKDLVCWSAMISGYAESDSPQEALNLF 343
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 237/405 (58%), Gaps = 3/405 (0%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
IH + + +D + A L+ A G + A ++F+ I N +W L++
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYA--QLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH-THVSKSGLDLDLHV 152
+ L+ MR TG A + T ++KAC NV + K +H + +S +D ++
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
++ Y L+NAR++F+ +R + +WTT+ISG+A+ RA EA LF QML E
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN TLA++L +C+ G L G+ VH ++ G EM A+ T+ + MY + G + A+
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FD MPERN+ +W++MI+ +G EEALD F K++ + +VPN +TFV +LSAC H+G
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G + F SM R YG+ P+ EHY CMVDLLGR G++ EA+ I M KP WGALL
Sbjct: 429 VKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKM 437
+AC+ H +++A + ++++++EP VYV+LSN+YA+A +M
Sbjct: 489 SACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEM 533
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 184/384 (47%), Gaps = 9/384 (2%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ--SPNHFMW 83
K+++ +Q+HA++II + S L A S L +AT FN I N W
Sbjct: 18 KTLNHTQQVHAKVIIHGFEDEVVLGSSLTN--AYIQSNRLDFATSSFNRIPCWKRNRHSW 75
Query: 84 NTLIRAQASSLNP--DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
NT++ + S + LY MRR + F +KAC + L IH
Sbjct: 76 NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLA 135
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K+GLD D +V LV Y+ + +A++VFDEI R +W ++ GY + + E
Sbjct: 136 MKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVF 195
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMGAILGTALVHM 260
LF M G +++TL ++ AC ++G+ VH R F + L +++ M
Sbjct: 196 RLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM 255
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K L A+ LF++ +RN+ W +ISG A A EA DLFR++ +E I+PN T
Sbjct: 256 YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTL 315
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+L +C G + G+ + G M R GIE ++ +D+ RCG + A + M+
Sbjct: 316 AAILVSCSSLGSLRHGKSVHGYMIR-NGIEMDAVNFTSFIDMYARCGNIQMARTVFD-MM 373
Query: 381 WKPDVVMWGALLAACKNHGNIEVA 404
+ +V+ W +++ A +G E A
Sbjct: 374 PERNVISWSSMINAFGINGLFEEA 397
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-- 278
++L+ +Q+ L ++VH V + GFE +LG++L + Y ++ L A + F+ +P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 279 ERNIATWNAMISGLASHGHA--EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+RN +WN ++SG + + L L+ ++ + + V + AC G ++ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 337 RQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
I G +MK G++ +V++ + G + A+++ + + + V+WG L+
Sbjct: 129 ILIHGLAMKN--GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLM 182
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/453 (35%), Positives = 248/453 (54%), Gaps = 40/453 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+S + K + ++ LKQ+ + MI+S HF +LL FC L +LSYA +F+
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLC-NLSYARFIFDRFSF 85
Query: 78 PNHFMWNTLIRAQASSL--NPDKAI-FLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
PN ++ ++ A +SSL + A F + + R+ PN + VLK+ + S
Sbjct: 86 PNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFST 145
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVS-SDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+HTH+ KSG L + V L+ Y+ S S + ARQ+FDE+ R + WT M+SGYA+
Sbjct: 146 PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYAR 205
Query: 194 SFRANEALMLFDQM--------------------LMEG------------FEPNSVTLAS 221
S + A+ LF+ M +E PN VT+
Sbjct: 206 SGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVC 265
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
VLSACAQ+G L+L + +H F R + +LV +Y K G L +A ++F +++
Sbjct: 266 VLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKS 325
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEK---EQIVPNDITFVGVLSACCHAGFIDVGRQ 338
+ WN+MI+ A HG +EEA+ +F ++ K I P+ ITF+G+L+AC H G + GR
Sbjct: 326 LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG 385
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
F M +GIEP+IEHYGC++DLLGR G+ EA E++ M K D +WG+LL ACK H
Sbjct: 386 YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIH 445
Query: 399 GNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
G++++AE VK ++AL PNN G +++N+Y E
Sbjct: 446 GHLDLAEVAVKNLVALNPNNGGYVAMMANLYGE 478
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 155/361 (42%), Gaps = 48/361 (13%)
Query: 104 MNMRRTGF----APNQHTFT-----FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
M R T F AP+ H F+ S R LN KQ+ + + SGL +
Sbjct: 1 MGTRVTQFSYLHAPSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCF 60
Query: 155 CLVR-CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS--FRANEALMLFDQMLMEG 211
L+R C +L+ AR +FD +++ +++ Y+ S A+ A F M+
Sbjct: 61 KLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRS 120
Query: 212 F-EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM---------- 260
PN VL + VH + GF + ++ TAL+H
Sbjct: 121 VPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITL 180
Query: 261 ----------------------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
Y ++G ++ A ALF+ MPER++ +WNA+++ +G
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 299 EEALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EA+ LFR++ E I PN++T V VLSAC G + + + I R + +
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYR-RDLSSDVFVSN 299
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
+VDL G+CG + EA + K M K + W +++ HG E A V +E++ L N
Sbjct: 300 SLVDLYGKCGNLEEASSVFK-MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIN 358
Query: 418 N 418
+
Sbjct: 359 D 359
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 168/436 (38%), Positives = 243/436 (55%), Gaps = 24/436 (5%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L L KC + + LKQIH Q+I + + S L+ +SS +L YA ++FN I
Sbjct: 150 PTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIK---ISSKFNLPYAFKIFNYI 206
Query: 76 QSPNHFMWNTLIRAQASSLNPDK---AIFLYMN-MRRTGFAPNQHTFTFVLKAC-SNVRS 130
+P F++NTLI + + N ++ A LY + PN TF + KAC SN
Sbjct: 207 SNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSW 266
Query: 131 LNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+ +HTHV K D V L+ Y+ + +R +FD I L W +++
Sbjct: 267 FHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILN 326
Query: 190 GYAQSFRAN-------------EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
YA+S + E+L LF M + G PN VT+ +++SAC+ G + G
Sbjct: 327 AYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGF 386
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE--RNIATWNAMISGLAS 294
VH FV +M +GTA V MY+K G L A +FD MPE R+ + AMI G A
Sbjct: 387 WVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAV 446
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG+ +AL+L+RK++ + +VP+ TFV + AC H G ++ G +IF SMK V+G+EPK+E
Sbjct: 447 HGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLE 506
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGC++DLLGR G++ EAEE + M KP+ V+W +LL A + HGN+ V E + ++I L
Sbjct: 507 HYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIEL 566
Query: 415 EPNNHGVYVVLSNMYA 430
EP G YV+LSNMYA
Sbjct: 567 EPETSGNYVLLSNMYA 582
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 227/413 (54%), Gaps = 41/413 (9%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L++L DK K++ L QIHA ++ DH + +S G L Y+ LF Q+
Sbjct: 33 LAVLIDKSKTISHLLQIHA--VLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQN 90
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F W +I A R Q F
Sbjct: 91 PSVFFWTAIIHGHA---------------LRGDVVSAQQLFD------------------ 117
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
T KS + L ++ CY+ +L+ AR +FD + R W MI GY Q+
Sbjct: 118 -TMPEKSLVSL-----TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMP 171
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
NEAL+LF +ML +PN VT+ SVLSAC Q G LE G VH +++ G + +GTAL
Sbjct: 172 NEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTAL 231
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY+K G+L A+ +FD + ++++ WN+MI G A HG ++EAL LF+ + + + P +
Sbjct: 232 VDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTN 291
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
ITF+G+LSAC H+G++ G IF MK YGIEPKIEHYGCMV+LLGR G V +A EL+K
Sbjct: 292 ITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVK 351
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
M +PD V+WG LL AC+ HG I + E++V+ ++ N G Y++LSN+YA
Sbjct: 352 NMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYA 404
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++H + G + IL L Y G L + ALF ++ W A+I G A G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
A LF + ++ +V + +L+ G +D R +F M+ G+ +
Sbjct: 108 DVVSAQQLFDTMPEKSLV----SLTAMLTCYAKHGELDAARVLFDGMEERDGVC-----W 158
Query: 357 GCMVDLLGRCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEVAERVVKEII- 412
M+D + G EA L +RM+ KP+ V ++L+AC G +E V I
Sbjct: 159 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN 218
Query: 413 -ALEPNNHGVYVVLSNMYAEAESMK 436
++ N H V L +MY++ S++
Sbjct: 219 NGIQFNVH-VGTALVDMYSKCGSLE 242
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 252/451 (55%), Gaps = 37/451 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSIQ 76
L+ +A++C M LK +HA +R+ DH +L F A+S GDL YA R+F+ +
Sbjct: 10 LAHMAERCTCMRDLKLLHAH-AFRTRLHDHTVVLGKLFRFAAVSPLGDLRYAHRMFDQMP 68
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
P F +NTLIRA A S P + + MR+ AP+Q +F F+LK+ S L
Sbjct: 69 HPTTFFYNTLIRAHAHSTTPSLSSLSFNLMRQNNVAPDQFSFNFLLKSRSRTTPLTHHND 128
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYS----------------------------------- 161
+H V K G LHV N L+ Y+
Sbjct: 129 VHGAVLKFGFCRHLHVQNGLIHFYANRGMTLLARRVFEDVLQLGLEVDVVSWSGLLVAHV 188
Query: 162 VSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLAS 221
+ +L AR+VFDE+ R + WT M++GY+Q+ R EAL LF +M G P+ VT+ S
Sbjct: 189 KAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRSGVWPDEVTMVS 248
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
++SACA G +E G VH FV+ GF L AL+ MY K G L +A +F M ++
Sbjct: 249 LVSACASLGDMETGMMVHRFVEENGFGWMVALCNALIDMYGKCGCLEEAWRVFHGMTRKS 308
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+ TWN M++ A++G+A+EA LF + +VP+ +T + +L A H G +D G ++F
Sbjct: 309 LITWNTMVTVCANYGNADEAFRLFEWMVCSGVVPDSVTLLALLVAYAHKGLVDEGIRLFE 368
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM R YG+EP+IEHYG ++D+LGR G++ EA +L+ + + +WGALL AC+ HG++
Sbjct: 369 SMDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYDLLTNIPIPCNDAVWGALLGACRIHGDV 428
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
E+ E+++K+++ L+P+ G Y++L ++Y A
Sbjct: 429 EMGEKLIKKLLELKPDEGGYYILLRDIYVAA 459
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/449 (33%), Positives = 249/449 (55%), Gaps = 34/449 (7%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
P L A + S+ + +H + S+ D F A+ L+ C S GDL A ++F +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI-HCYFSC-GDLDSACKVFTT 191
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I+ + WN++I +PDKA+ L+ M + T VL AC+ +R+L
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA-- 192
+Q+ +++ ++ ++++L + N ++ Y+ + +A+++FD + + WTTM+ GYA
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 193 -----------------------------QSFRANEALMLFDQM-LMEGFEPNSVTLASV 222
Q+ + NEAL++F ++ L + + N +TL S
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSACAQ G LELG +H ++K G M + +AL+HMY+K G L K++ +F+S+ +R++
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
W+AMI GLA HG EA+D+F K+++ + PN +TF V AC H G +D +F
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+ YGI P+ +HY C+VD+LGR G + +A + I+ M P +WGALL ACK H N+
Sbjct: 492 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLN 551
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+AE ++ LEP N G +V+LSN+YA+
Sbjct: 552 LAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 221/412 (53%), Gaps = 35/412 (8%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L ++C S+ QLKQ H MI + D ++AS+L A ALSS L YA ++F+ I PN
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F WNTLIRA AS +P +I+ +++M + PN++TF F++KA + V SL+ + +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
KS + D+ V N L+ CY DL++A +VF I+ + + W +MI+G+ Q ++
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL LF +M E + + VT+ VLSACA+ LE G +V +++ + L A++
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 260 MYTKNGALAKAKALFD-------------------------------SMPERNIATWNAM 288
MYTK G++ AK LFD SMP+++I WNA+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 289 ISGLASHGHAEEALDLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
IS +G EAL +F +L+ ++ + N IT V LSAC G +++GR I +K+ +
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-H 394
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
GI ++ + +CG + ++ E+ V K DV +W A++ HG
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNS-VEKRDVFVWSAMIGGLAMHG 445
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 230/402 (57%), Gaps = 6/402 (1%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALS--SSGDLSYATRLFNSIQSPNHFMWNTLIR 88
LK+ HA++ D SR+L A+ S + A+ +F I +P F+WN +IR
Sbjct: 736 LKKTHAKIFAYGLQYD----SRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 791
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
A+ ++ LY M G P++ F F LK+C+ + L K IH H+ G
Sbjct: 792 GFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSN 851
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
DL V LV Y+ D+ AR VFD++ R L WT+MISGYA + +E L FD M
Sbjct: 852 DLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMR 911
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G PN V++ SVL AC G L GE H +V GFE ++ TA++ MY+K G+L
Sbjct: 912 SSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLD 971
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A+ LFD +++ W+AMI+ HGH +A+DLF ++ K + P+ +TF VLSAC
Sbjct: 972 LARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACS 1031
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H+G ++ G+ F M + I K+ +Y CMVDLLGR G++ EA +LI+ M +PD +W
Sbjct: 1032 HSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIW 1091
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
G+LL AC+ H N+++AE++ + L+P + G +V+LSN+YA
Sbjct: 1092 GSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYA 1133
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 210/372 (56%), Gaps = 1/372 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ +G A LF+ + + W+T+I A++ ++A+ L+ M F PN T
Sbjct: 252 AKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVV 311
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L+AC+ R+L K+IH G +LD V L+ Y S + A +F + +
Sbjct: 312 SALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKK 371
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W ++SGYAQ+ A +++ +F ML +G +P++V + +L+A ++ G + +H
Sbjct: 372 DVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLH 431
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+V GF +G +L+ +Y+K G+L A LF M R++ W++MI+ HG
Sbjct: 432 GYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGG 491
Query: 300 EALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EAL++F ++ K V PN++TF+ +LSAC HAG ++ G +IF M Y + P EH+G
Sbjct: 492 EALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGI 551
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
MVDLLGR G++ +A ++I RM +WGALL AC+ H NIE+ E K + L+P++
Sbjct: 552 MVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSH 611
Query: 419 HGVYVVLSNMYA 430
G Y++LSN+YA
Sbjct: 612 AGYYILLSNIYA 623
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 221/431 (51%), Gaps = 16/431 (3%)
Query: 5 CSSLRQPPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRI-QDHFAASRLLAFCALS 60
C++ P P++L A C + L K IH + I D F S L+ S
Sbjct: 95 CTAGEAPDNFTIPIALKA--CAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVEL--YS 150
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFT 119
G + A ++F Q P+ +W +++ + +P++A+ L+ M + T
Sbjct: 151 KCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLV 210
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ AC+ + ++ +H V + D DL +VN L+ Y+ + A +F ++ +
Sbjct: 211 SVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK 270
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W+TMI+ YA + ANEAL LF +M+ + FEPNSVT+ S L ACA S LE G+K+H
Sbjct: 271 DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH 330
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+GFE+ + TAL+ MY K +A LF +P++++ +W A++SG A +G A
Sbjct: 331 KIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAY 390
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+++ +FR + + I P+ + V +L+A G + G + R G + +
Sbjct: 391 KSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASL 449
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALE 415
++L +CG + +A +L K M+ + DVV+W +++AA HG +E+ +++VK +
Sbjct: 450 IELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEALEIFDQMVKN-STVR 507
Query: 416 PNNHGVYVVLS 426
PNN +LS
Sbjct: 508 PNNVTFLSILS 518
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 216/411 (52%), Gaps = 9/411 (2%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L C + + Q+H+Q+ + + D F A++L + A +S L A ++F+ PN
Sbjct: 10 LFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCAS--LQAARKVFDETPHPNV 67
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+WN+ +R+ ++ + L+ M T G AP+ T LKAC+ +R L K IH
Sbjct: 68 HLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHG 127
Query: 140 HVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
K+ + D+ V + LV YS + A +VF+E + +WT+M++GY Q+
Sbjct: 128 FAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPE 187
Query: 199 EALMLFDQM-LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EAL LF QM +M+ + VTL SV+SACAQ ++ G VH V R F+ L +L
Sbjct: 188 EALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSL 247
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+++Y K G A LF MPE+++ +W+ MI+ A++ A EAL+LF ++ +++ PN
Sbjct: 248 LNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNS 307
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+T V L AC + ++ G++I + G E ++D+ +C EA +L +
Sbjct: 308 VTVVSALQACAVSRNLEEGKKIH-KIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQ 366
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
R+ K DVV W ALL+ +G + V + +++ ++P+ V +L+
Sbjct: 367 RLP-KKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILA 416
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 164/356 (46%), Gaps = 14/356 (3%)
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ +C K+ H + GL D ++ Y + ++ A VF++I N +W M
Sbjct: 730 ISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVM 789
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I G+A R +L L+ +M+ +G +P+ L +CA L+ G+ +H + G
Sbjct: 790 IRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGC 849
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ ALV MY K G + A+ +FD M R++ +W +MISG A +G+ E L F
Sbjct: 850 SNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDL 909
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ ++PN ++ + VL AC + G + G + F S G E I ++D+ +CG
Sbjct: 910 MRSSGVIPNRVSILSVLLACGNLGALRKG-EWFHSYVIQTGFEFDILVATAIMDMYSKCG 968
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALEPNNHGVYV 423
+ A L K D+V W A++A+ HG+ I++ +++VK + P++
Sbjct: 969 SLDLARCLFDETAGK-DLVCWSAMIASYGIHGHGRKAIDLFDQMVKA--GVRPSHVTFTC 1025
Query: 424 VLSNMYAEA--ESMKMQLEILLVQVLFA----GLASAADILQNPDFESPPTNLTPN 473
VLS E KM +++ + + A A D+L S +L N
Sbjct: 1026 VLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIEN 1081
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 236/408 (57%), Gaps = 1/408 (0%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK++ Q+KQ+HA + +S + ++ + L + + L+ A LF+ + N W+
Sbjct: 1092 CKNICQIKQLHALITTNSVLYNNLTVANKLLYVYVHHKC-LTDAYALFDEMPQKNPVSWS 1150
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I + + + R G P+ +T FV+KAC + +L+ + IH V K
Sbjct: 1151 IMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKY 1210
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GL LD V LV Y+ + +A+ +FD + ++ L WT MI GYA+ A E+L+LF
Sbjct: 1211 GLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLF 1270
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
D + EGF P+ + + S+++ACA+ G + VH +V F + ILGTA++ MY K
Sbjct: 1271 DHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKC 1330
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + A+ +FD+M +N+ +W+AMI+ HG ++AL+LF + I+PN+ITFV +L
Sbjct: 1331 GDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLL 1390
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC HAG ++ G + M +G+ P I+H+ CMVDLLGR G++ EA I+ M + D
Sbjct: 1391 YACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKD 1450
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+W +LL AC+ H I++AE+ K ++ L+P N G Y++LSN+YA A
Sbjct: 1451 EGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSNIYANA 1498
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 221/370 (59%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F + S + WN +I A + N +K + L++ M ++G P++ T+ VL
Sbjct: 425 GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVL 484
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC+ ++LNC +IH + KS L LD V L+ YS + A ++ D + +T+
Sbjct: 485 KACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVV 544
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +ISG++ ++ EA F +ML G +P++ T A++L CA +ELG+++H +
Sbjct: 545 SWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQI 604
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ + A + + LV MY+K G + + +F+ P R+ TWNAM+ G A HG EEAL
Sbjct: 605 IKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEAL 664
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+F ++ E + PN TF+ VL AC H G ++ G F SM YG++P++EHY C+VD+
Sbjct: 665 KIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDI 724
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
+GR G+V +A ELI+ M ++ D V+W LL+ CK HGN+EVAE+ I+ LEP + Y
Sbjct: 725 MGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAY 784
Query: 423 VVLSNMYAEA 432
V+LSN+YA A
Sbjct: 785 VLLSNIYANA 794
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 174/344 (50%), Gaps = 4/344 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ GD+ A +LF+++ + WN+LI + + K I +++ M R G ++ TF
Sbjct: 119 AGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFA 178
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
VLK+CS++ QIH K G D D+ + L+ Y+ L+ + Q F + +
Sbjct: 179 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK 238
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W+ +I+G Q+ L LF +M G + T ASV +CA L LG ++H
Sbjct: 239 NWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLH 298
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
F ++GTA + MY K L+ A+ LF+S+P N+ ++NA+I G A
Sbjct: 299 GHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGI 358
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGC 358
EAL +FR L+K + ++++ G AC G Q+ G SMK + + I
Sbjct: 359 EALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSL--CQSNICVANA 416
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
++D+ G+CG ++EA + + MV + D V W A++AA + +GN E
Sbjct: 417 ILDMYGKCGALVEACLVFEEMVSR-DAVSWNAIIAAHEQNGNEE 459
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 187/368 (50%), Gaps = 12/368 (3%)
Query: 64 DLSYATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
+LS A +LFNS+ PNH + +N +I A S +A+ ++ ++++G ++ + +
Sbjct: 325 NLSDAQKLFNSL--PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGA 382
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
+AC+ ++ Q+H KS ++ V N ++ Y L A VF+E+ +R
Sbjct: 383 FRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 442
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W +I+ + Q+ + L LF ML G EP+ T SVL ACA L G ++H
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ + + +G AL+ MY+K G + KA+ L D + E+ + +WNA+ISG + +EEA
Sbjct: 503 IIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 562
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY--GCM 359
F K+ + + P++ T+ +L C + +++G+QI ++ E + + Y +
Sbjct: 563 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA---QIIKKELQSDAYISSTL 619
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPN 417
VD+ +CG ++ +LI D V W A++ HG E A ++ + ++ ++PN
Sbjct: 620 VDMYSKCGN-MQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPN 678
Query: 418 NHGVYVVL 425
+ VL
Sbjct: 679 HATFLAVL 686
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 128/273 (46%), Gaps = 8/273 (2%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
+IH ++I S D F L+ S G + A +L + + WN +I +
Sbjct: 498 EIHNRIIKSRLGLDSFVGIALIDM--YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSL 555
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
++A + M G P+ T+ +L C+N+ ++ KQIH + K L D ++
Sbjct: 556 QKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYI 615
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ LV YS ++ + + +F++ NR W M+ GYAQ EAL +F+ M +E
Sbjct: 616 SSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENV 675
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKM---RGFEMGAILGTALVHMYTKNGALAK 269
+PN T +VL AC G +E G +H F M G + + +V + ++G ++K
Sbjct: 676 KPNHATFLAVLRACGHMGLVEKG--LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSK 733
Query: 270 AKALFDSMP-ERNIATWNAMISGLASHGHAEEA 301
A L + MP E + W ++S HG+ E A
Sbjct: 734 ALELIEGMPFEADAVIWRTLLSICKIHGNVEVA 766
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 34/298 (11%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ TF+ + + CS+ ++L KQ H + + + V NCL++ Y SDL A +VF
Sbjct: 41 KKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVF 100
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGFEPNS------- 216
D + R W M+ GYA A LFD M L+ G+ N
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 217 --------------VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
T A VL +C+ G ++H GF+ + G+AL+ MY
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K L + F SMPE+N +W+A+I+G + L+LF++++K + + TF
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280
Query: 323 VLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
V +C + +G Q+ G ++K +G + I +D+ +C + +A++L +
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG--TATLDMYMKCNNLSDAQKLFNSL 336
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M++ F+P ++ + LE KV + R + A++ Y G
Sbjct: 67 RMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRD----TVSWNAMLFGYAGRG 122
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ A+ LFD+MPER++ +WN++ISG +G + +D+F ++ + V + TF VL
Sbjct: 123 DIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLK 182
Query: 326 ACC----HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
+C H G G QI G ++ G + + ++D+ +C K+ + + M
Sbjct: 183 SCSSLEDHGG----GIQIHGLAVKM-GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPE 237
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEI 411
K + V W A++A C + ++ + KE+
Sbjct: 238 K-NWVSWSAIIAGCVQNDDLRGGLELFKEM 266
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIHAQ+I D + +S L+ S G++ +F + + WN ++ A
Sbjct: 598 KQIHAQIIKKELQSDAYISSTLVDM--YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYA 655
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL-NCCKQIHTHVSKSGLDLDL 150
++A+ ++ M+ PN TF VL+AC ++ + H+ +S GLD L
Sbjct: 656 QHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQL 715
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMIS 189
+C+V S ++ A ++ + + V W T++S
Sbjct: 716 EHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 755
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 249/416 (59%), Gaps = 16/416 (3%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFC-ALSSSGDLSYATRLFNSIQSPNHFMWN 84
K+ QL QIHA ++ Q + S ++ C AL G YA +F+ Q+PN ++N
Sbjct: 20 KTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMG---YANLVFHQTQNPNLLLFN 76
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
++I+ + + ++ L+ M+ G P++ TF +LK+CS + K +H V
Sbjct: 77 SMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVV 136
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-----RNRTLNVWTTMISGYAQSFRANE 199
G + + ++ Y+ + +A++VFDE+ R+R++ W +MI+G QS R E
Sbjct: 137 GFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDMRDRSVVSWNSMIAGLEQSGRDGE 196
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK----MRGFEMGAILGT 255
AL LF +M GFEP+ T+ ++L CA+ G +++GE +H + + +R F +G
Sbjct: 197 ALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYAESSRLLRDF---ISVGN 253
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
+LV Y K G L A +F+ MP++N+ +WNAMISGL +G E DLF ++ + + P
Sbjct: 254 SLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRP 313
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
ND TFVGVLS C HAG ++ GR +F SM + +EPK+EH+GCMVDLL R G + EA +L
Sbjct: 314 NDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDL 373
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
++ M +P+ V+WG+LL+A + G+++ AE VKE+I LEP N G YV+LSN+YAE
Sbjct: 374 VRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAE 429
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 252/446 (56%), Gaps = 41/446 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L D CKSM Q+KQ HAQ+I ++ I +A++LL A +S LSYA +LF+ I P+
Sbjct: 22 LIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLAACAS---LSYAHKLFDQIPQPDL 78
Query: 81 FMWNTLIRAQASSLNPD---KAIFLYMNMRRT-GFAPNQHTFTFVLKACSNVRSLNCCKQ 136
F++NT+I+A SL+P ++ ++ ++ + G PN+++F F AC N + +Q
Sbjct: 79 FIYNTMIKAH--SLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQ 136
Query: 137 IHTHVSKSGL-------------------------------DLDLHVVNCLVRCYSVSSD 165
+ H K GL D DL+ N L+ Y S +
Sbjct: 137 VRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGN 196
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
++ A+++FD +R R + W+T+I+GY Q EAL F +ML G +PN TL S L+A
Sbjct: 197 MSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAA 256
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA-KALFDSMPERNIAT 284
C+ L+ G+ +H ++ +M L +++ MY K G + A + F+ ++ +
Sbjct: 257 CSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWL 316
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNAMI G A HG EA+++F +++ E+I PN +TF+ +L+AC H ++ G+ F M
Sbjct: 317 WNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMV 376
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
Y I P+IEHYGCMVDLL R G + EAE++I M PDV +WGALL AC+ + ++E
Sbjct: 377 SDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERG 436
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA 430
R+ + I ++PN+ G +V+LSN+Y+
Sbjct: 437 YRIGRIIKGMDPNHIGCHVLLSNIYS 462
>gi|255641766|gb|ACU21153.1| unknown [Glycine max]
Length = 529
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 248/415 (59%), Gaps = 5/415 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L + CK+ +K+ HAQ+++ QD F A+RL+ S +L +A ++F+++ P+
Sbjct: 26 LLNLCKTTDNVKKAHAQVVVRGHEQDPFIAARLID--KYSHFSNLDHARKVFDNLSEPDV 83
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F N +I+ A++ +A+ ++ MR G PN +T+ FVLKAC + + IH H
Sbjct: 84 FCCNVVIKVYANADPFGEALKVHDAMRWRGITPNYYTYPFVLKACGAEGASKKGRVIHEH 143
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
K G+DLDL V N LV Y+ D+ +R+VFDEI +R + W +M+SGY + ++A
Sbjct: 144 AVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIVSWNSMVSGYTVNGYVDDA 203
Query: 201 LMLFDQMLMEGF--EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
++LF ML + P+ T +VL A AQ+ + G +H ++ + + +GT L+
Sbjct: 204 ILLFYDMLRDESVGGPDHATFVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGTGLI 263
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+Y+ G + A+A+FD + +R++ W+A+I +HG A+EAL LFR+L + P+ +
Sbjct: 264 SLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGV 323
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
F+ +LSAC HAG ++ G +F +M+ YG+ HY C+VDLLGR G + +A E I+
Sbjct: 324 VFLCLLSACSHAGLLEQGWHLFNAME-TYGVAKSEAHYACIVDLLGRAGDLEKAVEFIQS 382
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
M +P ++GALL AC+ H N+E+AE +++ L+P+N G YV+L+ MY +AE
Sbjct: 383 MPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDNAGRYVILAQMYEDAE 437
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 228/403 (56%), Gaps = 2/403 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+H K IH Q I + F + L + G Y RLF ++ P+ W TLI
Sbjct: 274 LHHGKAIHTQTIKQGFDESSFVINTLATM--YNKCGKADYVMRLFEKMKMPDVVSWTTLI 331
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ A+ + MR++ +PN++TF V+ AC+N+ +QIH HV + GL
Sbjct: 332 TTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLV 391
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
L V N +V YS S L +A VF I + + W+T+I+ Y+Q A EA M
Sbjct: 392 DALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWM 451
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
EG +PN L+SVLS C LE G++VH V G + A++ +AL+ MY+K G++
Sbjct: 452 RREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSV 511
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A +F+ M NI +W AMI+G A HG+++EA++LF K+ + P+ +TF+GVL+AC
Sbjct: 512 EEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTAC 571
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAG +D+G F M Y I P EHYGC++DLL R G++ EAE +I+ M D V+
Sbjct: 572 SHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVV 631
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
W LL +C+ HG+++ ++++ L+PN+ G ++ L+N+YA
Sbjct: 632 WSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYA 674
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 169/357 (47%), Gaps = 4/357 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + R+F + N W +I + +A+ + M + + HTF L
Sbjct: 206 GKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIAL 265
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KA ++ L+ K IHT K G D V+N L Y+ + ++F++++ +
Sbjct: 266 KASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVV 325
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WTT+I+ Y Q A+ F +M PN T A+V+SACA + GE++H V
Sbjct: 326 SWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHV 385
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + ++V +Y+K+G L A +F + ++I +W+ +I+ + G+A+EA
Sbjct: 386 LRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAF 445
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
D + +E PN+ VLS C ++ G+Q+ + + GI+ + + ++ +
Sbjct: 446 DYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCI-GIDHEAMVHSALISM 504
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPN 417
+CG V EA ++ M +++ W A++ HG + A + ++I + L+P+
Sbjct: 505 YSKCGSVEEASKIFNGMKIN-NIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPD 560
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 158/344 (45%), Gaps = 7/344 (2%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHT 117
L G L + +F+ + + W TLI ++ + +A+ L+ NM + G +Q
Sbjct: 100 LVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFM 159
Query: 118 FTFVLKACSNVRSLNCC--KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
+ LKAC +N C + +H KSGL + V + L+ Y + +VF +
Sbjct: 160 ISVALKACG--LGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKK 217
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ R + WT +I+G + EAL+ F +M + +S T A L A A S L G
Sbjct: 218 MTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHG 277
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+ +H +GF+ + + L MY K G LF+ M ++ +W +I+
Sbjct: 278 KAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQK 337
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G E A++ F+++ K + PN TF V+SAC + G QI G + R+ G+ +
Sbjct: 338 GEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRL-GLVDALSV 396
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+V L + G +L++ L+ + + D++ W ++A G
Sbjct: 397 ANSIVTLYSKSG-LLKSASLVFHGITRKDIISWSTIIAVYSQGG 439
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 228/405 (56%), Gaps = 31/405 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
+S GD+ A ++F+ + WN LI +KAI++Y M G P+ T
Sbjct: 201 FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
++ +CS + LN K+ + +V ++GL + + +VN L+ +S D++ AR++FD +
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 179 RTLNVWTTMISGYA-------------------------------QSFRANEALMLFDQM 207
RT+ WTTMISGYA Q+ R +AL LF +M
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+P+ +T+ LSAC+Q G L++G +H +++ + LGT+LV MY K G +
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
++A ++F + RN T+ A+I GLA HG A A+ F ++ I P++ITF+G+LSAC
Sbjct: 441 SEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
CH G I GR F MK + + P+++HY MVDLLGR G + EA+ L++ M + D +
Sbjct: 501 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 560
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WGALL C+ HGN+E+ E+ K+++ L+P++ G+YV+L MY EA
Sbjct: 561 WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEA 605
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 224/431 (51%), Gaps = 37/431 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL +KCK + LKQI AQMII+ I D FA+SRL+AFCALS S L Y+ ++ I
Sbjct: 55 PLLSLL-EKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGI 113
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA---PNQHTFTFVLKACSNVRSLN 132
++PN F WN IR + S NP ++ LY M R G P+ T+ + K C+++R +
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
I HV K L+L HV N + ++ D+ NAR+VFDE R L W +I+GY
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ A +A+ ++ M EG +P+ VT+ ++S+C+ G L G++ + +VK G M
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG---------------- 296
L AL+ M++K G + +A+ +FD++ +R I +W MISG A G
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 297 ---------------HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
++AL LF++++ P++IT + LSAC G +DVG I
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
+++ Y + + +VD+ +CG + EA + + + + + A++ HG+
Sbjct: 414 YIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHG-IQTRNSLTYTAIIGGLALHGDA 471
Query: 402 EVAERVVKEII 412
A E+I
Sbjct: 472 STAISYFNEMI 482
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 21/306 (6%)
Query: 13 LPIPPLSLLAD---KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS----GDL 65
+ IP ++ L D KC +H+ + RI D+ ++++ + S G L
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEAR----------RIFDNLEKRTIVSWTTMISGYARCGLL 339
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+ +LF+ ++ + +WN +I + A+ L+ M+ + P++ T L AC
Sbjct: 340 DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S + +L+ IH ++ K L L++ + LV Y+ +++ A VF I+ R +T
Sbjct: 400 SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYT 459
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+I G A A+ A+ F++M+ G P+ +T +LSAC G ++ G +K R
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Query: 246 GFEMGAILG--TALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEAL 302
F + L + +V + + G L +A L +SMP E + A W A++ G HG+ E
Sbjct: 520 -FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 578
Query: 303 DLFRKL 308
+KL
Sbjct: 579 KAAKKL 584
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/432 (36%), Positives = 242/432 (56%), Gaps = 4/432 (0%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS 60
M ++ R + L+ KS+ LK +HA I + D ++ +A A S
Sbjct: 142 MGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIA--AYS 199
Query: 61 SSGDLSYATRLFNSIQ--SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
G+L A +F+ IQ + + WN+LI A A+ Y + GF P+ T
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
+L +C +L IH H + G D D+ ++N L+ YS D+++A +FD +
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
RT WT MISGY++ R ++AL+LF+ M G +P+ VT+ S++S C ++G L LG +
Sbjct: 320 RTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWI 379
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
+ + + ++ AL+ MY K G+L A+ +F S+P R + +W AMI+ A +G
Sbjct: 380 DNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEF 439
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EALDLF L + I PN+ITF+ VL ACCH G+++ GR+ F M YGI P ++HY C
Sbjct: 440 REALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSC 499
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
M+DLLGR GK++EA E+I+ M KPD +WGALL ACK H N+E+ E V + + L+P
Sbjct: 500 MIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRV 559
Query: 419 HGVYVVLSNMYA 430
+V ++N+YA
Sbjct: 560 AVSFVEMANIYA 571
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 206/433 (47%), Gaps = 20/433 (4%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
LK + L+ P LS K + + IH ++ S D + + ++
Sbjct: 43 LKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDM--YVKC 100
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A LF+ + N WN +I + + D+ L+M MR G P+ T +
Sbjct: 101 GKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLT 160
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--RT 180
+A + +SL K +H ++GLD D V N + YS +L A+ VF I+ R+
Sbjct: 161 RAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARS 220
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W ++I+ YA + +A+ + +L +GF+P++ T+ S+LS+C Q L G +H
Sbjct: 221 SVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIH- 279
Query: 241 FVKMRGFEMGA----ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
GF++G L L+ MY++ G ++ A LFD M R +W AMISG + G
Sbjct: 280 ---GHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVG 336
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
++AL LF +E+ P+ +T + ++S C G + +G I + ++ ++ +
Sbjct: 337 RVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWI-DNYASLHELKKDVVVC 395
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPD--VVMWGALLAACKNHGNIEVAERVVKEI--I 412
++D+ +CG + +A E+ + P+ VV W A++AAC +G A + +
Sbjct: 396 NALIDMYAKCGSLNDAREIFYSL---PNRTVVSWTAMIAACALNGEFREALDLFSLLSES 452
Query: 413 ALEPNNHGVYVVL 425
+EPNN VL
Sbjct: 453 GIEPNNITFLAVL 465
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 4/324 (1%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN+ IR + N KA+ L+ ++ G PN TF F+ KAC+ + L + IHTHV
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
KS D++V +V Y +++A +FD++ R + W MI G++Q +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF M + G P++ T+ + A + L + VH G + + + Y+
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
Query: 263 KNGALAKAKALFDSMPE--RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
K G L AK +F + + R+ +WN++I+ A G +A+ ++ L + P+ T
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+ +LS+C + G I G ++ G + I ++ + RCG + A L M
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQL-GCDSDISLINTLISMYSRCGDISSATILFDGMS 318
Query: 381 WKPDVVMWGALLAACKNHGNIEVA 404
+ V W A+++ G ++ A
Sbjct: 319 IRT-CVSWTAMISGYSEVGRVDDA 341
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 75/151 (49%)
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
TL W + I G A++AL LF Q+ + G +PN+ T + ACA+ L + +H
Sbjct: 16 TLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIH 75
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V F + TA+V MY K G + A LFD MP RNIA+WNAMI G + G +
Sbjct: 76 THVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLD 135
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+LF + P+ T +G+ A A
Sbjct: 136 RVFNLFMGMRLVGTRPDAATVIGLTRAVISA 166
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 248/461 (53%), Gaps = 47/461 (10%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+S L C + L+Q+HA++I QDHF S+ L C +S + SY T +FN + S
Sbjct: 76 ISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLC--NSLSNFSYTTSVFNGVSS 133
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ +WNT I+ + + + + L++ M+R+ P++ T+ ++KACS V +
Sbjct: 134 PSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAF 193
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + G+ D+ V+ L+ Y ++ AR+VFDE+ R + WT MI+GYA
Sbjct: 194 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDL 253
Query: 198 NEALMLFDQM----------LMEGF----------------------------------E 213
EA LFD+M ++ G+ +
Sbjct: 254 VEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVK 313
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM-GAILGTALVHMYTKNGALAKAKA 272
P+ + S++SAC+Q G LEL + V +V+ ++ A + AL+ M K G++ +A
Sbjct: 314 PDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATK 373
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
LF+ MP+R++ ++ +M+ GL+ HG +A+ LF ++ E + P+D+ F +L+AC AG
Sbjct: 374 LFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGL 433
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+D G F SMK Y I P +HY CMVDLLGR G++ EA EL+K M +P WGALL
Sbjct: 434 VDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALL 493
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
ACK H +IE+ E V ++ LEP N G YV+LSN+YA AE
Sbjct: 494 GACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAE 534
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 212/363 (58%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
++F ++ +P+ WN L+ S + ++ M GF PN TF VL++CS+
Sbjct: 206 GNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSS 265
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ KQ+H H+ K+ D D V LV Y+ + L +A FD + NR + WT +
Sbjct: 266 LLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVI 325
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
ISGYAQ+ +A +A+ F QM EG +PN TLAS LS C+ LE G ++H G
Sbjct: 326 ISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGH 385
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+G+ALV +Y K G + A+A+F + R+I +WN +ISG + HG E+AL+ FR
Sbjct: 386 FGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRM 445
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ E I+P++ TF+GVLSAC G ++ G++ F SM ++YGI P IEHY CMVD+LGR G
Sbjct: 446 MLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAG 505
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
K E + I+ M P ++W +L ACK HGN++ E+ K++ +EP Y++LSN
Sbjct: 506 KFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSN 565
Query: 428 MYA 430
++A
Sbjct: 566 IFA 568
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 190/384 (49%), Gaps = 16/384 (4%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ + K +HA + S D F L+ S G + A ++F I++P+ W+ +
Sbjct: 66 SLREGKVLHALALRSGCEIDEFLGCSLVDM--YSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I + +A L+ MRR G PNQ T + ++ +N+ L + IH + K G
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ D V N L+ Y S + + +VF+ + N L W ++SG+ S +F Q
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
ML+EGF+PN T SVL +C+ E G++VH + + +GTALV MY K
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L A FD + R+I +W +ISG A AE+A+ FR++++E I PN+ T LS
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG------CMVDLLGRCGKVLEAEELIKRMV 380
C H ++ GRQ+ + + K H+G +VDL G+CG + AE + K ++
Sbjct: 364 CSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLI 416
Query: 381 WKPDVVMWGALLAACKNHGNIEVA 404
+ D+V W +++ HG E A
Sbjct: 417 SR-DIVSWNTIISGYSQHGQGEKA 439
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 10/367 (2%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
+ A RLF + N WN L+ A + K + L+ M+ ++ T + VLK
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+N SL K +H +SG ++D + LV YS + +A +VF +IRN + W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+ MI+G Q EA LF M +G PN TL+S++S G L G+ +H +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
GFE ++ L+ MY K+ + +F++M ++ +WNA++SG +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F ++ E PN TF+ VL +C + G+Q+ + + + +VD+
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA-LVDMYA 299
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK-----EIIALEPNNH 419
+ + +A R+V D+ W +++ + + AE+ VK + ++PN +
Sbjct: 300 KARCLEDAGVAFDRLV-NRDIFSWTVIISG---YAQTDQAEKAVKYFRQMQREGIKPNEY 355
Query: 420 GVYVVLS 426
+ LS
Sbjct: 356 TLASCLS 362
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 42/254 (16%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+HA + + D F S L+ G + +A +F + S + WNT+I +
Sbjct: 374 RQLHAVAVKAGHFGDIFVGSALVDL--YGKCGCMEHAEAIFKGLISRDIVSWNTIISGYS 431
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+KA+ + M G P++ TF VL ACS + + K+ +SK ++
Sbjct: 432 QHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK------IY 485
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+N + Y+ D I G A F NE + ++M
Sbjct: 486 GINPSIEHYACMVD----------------------ILGRAGKF--NEVKIFIEEM---N 518
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA---LVHMYTKNGALA 268
P S+ +VL AC G ++ GEK + FEM ++ ++ L +++ G
Sbjct: 519 LTPYSLIWETVLGACKLHGNVDFGEK----AAKKLFEMEPMMDSSYILLSNIFASKGRWD 574
Query: 269 KAKALFDSMPERNI 282
+ + M R I
Sbjct: 575 DVRNIRALMTSRGI 588
>gi|297846398|ref|XP_002891080.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336922|gb|EFH67339.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 241/420 (57%), Gaps = 8/420 (1%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+ + C + Q+KQ+ + + + Q F SRLL CA+S GDLS+A ++F I
Sbjct: 6 METMIQNCVTFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVKIFRHIPK 65
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-----NQHTFTFVLKACSNVRSLN 132
P WN +IR A S +P A Y +M + + + T +F LKAC+ +
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQRSSSSALCRVDALTCSFTLKACARALCSS 125
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
QIH +S+ G D + L+ YS + DL +A ++FDE+ R + W +I+G
Sbjct: 126 AMVQIHCQISRRGFSADALLCTTLLDAYSKNGDLISALKLFDEMSVRDVASWNALIAGLV 185
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV-HVFVKMRGFEMGA 251
RA+EAL L+ +M MEG + VT+ + L AC+ G ++ GEK+ H ++K +
Sbjct: 186 AGNRASEALELYKRMEMEGIRRSEVTVVAALGACSHLGDVKEGEKILHGYIKDEKLDHNV 245
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
I+ A++ MY+K G + KA +F+ ++++ TWN MI+G + HG A AL++F KLE
Sbjct: 246 IVSNAVIDMYSKCGFVDKAFQVFEQFTGKKSVVTWNTMITGFSVHGEAHRALEIFEKLEH 305
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
I P+D++++ L+AC H G ++ G IF +M G+EP ++HYGC+VDLL R G++
Sbjct: 306 NGIKPDDVSYLAALTACRHTGLVEYGISIFNNMA-CNGVEPNMKHYGCVVDLLSRAGRLR 364
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
EA ++I M PD V+W +LL A + H N+E+AE ++I + NN G +V+LSN+YA
Sbjct: 365 EAHDIICSMSMVPDPVLWQSLLGASEIHNNVEMAEIASRKIKEMGVNNDGDFVLLSNVYA 424
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 247/457 (54%), Gaps = 14/457 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ IH Q + ++ F A+ L + G L Y F +++ + W T++ A
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTM--YNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYI 294
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
D + + MR + PN++TF+ V+ C+N L +Q+H HV G L
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N ++ YS +L + +VF ++ R + W+T+I+ Y+Q EA +M EG
Sbjct: 355 VANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEG 414
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+PN LASVLS C LE G+++H V G E +++ +AL+ MY K G++A+A
Sbjct: 415 PKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEAS 474
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F + +I +W AMISG A HGH++EA++LF ++K + P+ +TF+GVL+AC HAG
Sbjct: 475 KIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAG 534
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+G F SM + Y I P EHYGCM+DLL R G++ +AE LI+ M + D V+W L
Sbjct: 535 MVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTL 594
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGL 451
L AC+ HG+++ +R E++ L+PN G ++ L+N++A K I + L
Sbjct: 595 LRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRM-------L 647
Query: 452 ASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIP 488
+ +++ P + S + + F ++G+ + P
Sbjct: 648 MKSKGVVKEPGWSSVKV-----KDSVFAFVSGDRSHP 679
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 173/360 (48%), Gaps = 8/360 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++ + ++F+ + + N W +I + + + + M R+ + + + L
Sbjct: 165 GEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KA ++ +LN + IHT K G D + V N L Y+ L+ F ++R +
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVV 284
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WTT+++ Y Q + + L F +M PN T ++V+S CA L+ GE++H V
Sbjct: 285 SWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHV 344
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
GF + +++ +Y+K G LA +F SM R+I TW+ +I+ + G+ EEA
Sbjct: 345 LCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAF 404
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ ++ E PN+ VLS C ++ G+Q+ + V G+E ++ +
Sbjct: 405 EYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSV-GLEQTSMVCSALIIM 463
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALEPNN 418
+CG + EA ++ WK D++ W A+++ HG+ IE+ E + K + L P++
Sbjct: 464 YAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQK--VGLRPDS 520
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 160/371 (43%), Gaps = 5/371 (1%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHT 117
L + L A LF+ + + W +I +S + +A+ L+ MR ++ +
Sbjct: 59 LVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFL 118
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ LK C + +H K+GL + V + L+ Y ++ + +VFDE+
Sbjct: 119 LSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMP 178
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R WT +I+G ++ + L F M E +S A L A A SG L G
Sbjct: 179 TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS 238
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +GF+ + + +L MY K G L F M ++ +W +++ G
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK 298
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+ L F+++ ++PN+ TF V+S C + + G Q+ + V G +
Sbjct: 299 EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV-GFVNALSVAN 357
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL--E 415
++ L +CG++ ++ M ++ D++ W ++AA G E A + + + +
Sbjct: 358 SIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 416 PNNHGVYVVLS 426
PN + VLS
Sbjct: 417 PNEFALASVLS 427
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 11/285 (3%)
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+DL N ++ ++ L +AR +FD++ R WT +ISGY S ++EAL LF +M
Sbjct: 47 VDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM 106
Query: 208 LMEG---FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
++ +P ++L L C G +H F G +G+AL+ MY K
Sbjct: 107 RLQSELRIDPFLLSLG--LKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKI 164
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + ++ +FD MP RN TW A+I+GL G++E L F + + ++ + + L
Sbjct: 165 GEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 325 SACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
A +G ++ GR I ++K+ G + + + +CGK+ ++M
Sbjct: 225 KASADSGALNHGRSIHTQTLKK--GFDENSFVANSLTTMYNKCGKLDYGLHTFRKMR-TL 281
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
DVV W ++ A G + + K + A + PN + V+S
Sbjct: 282 DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVIS 326
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 257/461 (55%), Gaps = 35/461 (7%)
Query: 6 SSLRQPPLPIPP--LSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAF---- 56
SSL + +PP + L+ C + Q KQ+H I+ + D F + L+ F
Sbjct: 74 SSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKN 133
Query: 57 ----CAL---------------------SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
CA+ S SGD+ A RLF+ + WN++I A
Sbjct: 134 GDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYA 193
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+A+ L+ M G PN T + C+ L K + +++ L ++
Sbjct: 194 HGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMI 252
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V L+ Y ++ AR+ FD ++ R + W+TMI+GYAQ+ R +E+L LF++M
Sbjct: 253 VHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATS 312
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+PN VTL VLSACAQ G ELG ++ V+ + + + LG+AL+ MYTK G + +A+
Sbjct: 313 CKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRAR 372
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
++F+ M + + TWN+M+ GLA +G A++A+ L++++ +E + PN+ITFV +L+AC HAG
Sbjct: 373 SVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAG 432
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G F MK ++ + P++EH C+VDLL + G++ EA + I M +P+ V+W L
Sbjct: 433 LVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTL 492
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L+AC+ H ++E+A+ +++ LEP+N +YV+LSN+YA+A
Sbjct: 493 LSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADA 533
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 195/394 (49%), Gaps = 38/394 (9%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
LS + A LF+++ P + TLI A + + + + + ++ R G
Sbjct: 29 LSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCV 88
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGL------------------DLDLHV-------- 152
V+K+C+ + + KQ+H H GL D+D V
Sbjct: 89 PLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPV 148
Query: 153 -----VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+NCL+ YS S D+ AR++FD + RT W +MI+ YA EAL LF +M
Sbjct: 149 KDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRM 208
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L EG PN++T+A++ S CA++G LE G+ + + + I+ TAL+ MY K A+
Sbjct: 209 LSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCQAI 267
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A+ FD M +R++ W+ MI+G A +G E+L+LF +++ PN++T VGVLSAC
Sbjct: 268 DEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSAC 327
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
G ++G QI GS + P + G ++D+ +CG V A + RM K V+
Sbjct: 328 AQLGSDELGGQI-GSHVESQNL-PLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV-VI 384
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIA--LEPNN 418
W +++ +G + A + KE+ ++PN
Sbjct: 385 TWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNE 418
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 221/370 (59%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F + S + WN +I A + N +K + L++ M ++G P++ T+ VL
Sbjct: 362 GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVL 421
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC+ ++LNC +IH + KS + LD V L+ YS + A ++ D + +T+
Sbjct: 422 KACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVV 481
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +ISG++ ++ EA F +ML G +P++ T A++L CA +ELG+++H +
Sbjct: 482 SWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQI 541
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ + A + + LV MY+K G + + +F+ P R+ TWNAM+ G A HG EEAL
Sbjct: 542 IKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEAL 601
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+F ++ E + PN TF+ VL AC H G ++ G F SM YG++P++EHY C+VD+
Sbjct: 602 KIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDI 661
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
+GR G+V +A ELI+ M ++ D V+W LL+ CK HGN+EVAE+ I+ LEP + Y
Sbjct: 662 MGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAY 721
Query: 423 VVLSNMYAEA 432
V+LSN+YA A
Sbjct: 722 VLLSNIYANA 731
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 184/364 (50%), Gaps = 12/364 (3%)
Query: 68 ATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+ +LFNS+ PNH + +N +I A S +A+ ++ ++++G ++ + + +AC
Sbjct: 266 SNQLFNSL--PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRAC 323
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ ++ Q+H KS ++ V N ++ Y L A VF+E+ +R W
Sbjct: 324 AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWN 383
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+I+ + Q+ + L LF ML G EP+ T SVL ACA L G ++H +
Sbjct: 384 AIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS 443
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
+ + +G AL+ MY+K G + KA+ L D + E+ + +WNA+ISG + +EEA F
Sbjct: 444 RMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTF 503
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY--GCMVDLL 363
K+ + + P++ T+ +L C + +++G+QI ++ E + + Y +VD+
Sbjct: 504 SKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA---QIIKKELQSDAYISSTLVDMY 560
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPNNHGV 421
+CG ++ +LI D V W A++ HG E A ++ + ++ ++PN+
Sbjct: 561 SKCGN-MQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATF 619
Query: 422 YVVL 425
VL
Sbjct: 620 LAVL 623
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 128/273 (46%), Gaps = 8/273 (2%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
+IH ++I S D F L+ S G + A +L + + WN +I +
Sbjct: 435 EIHNRIIKSRMGLDSFVGIALIDM--YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSL 492
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
++A + M G P+ T+ +L C+N+ ++ KQIH + K L D ++
Sbjct: 493 QKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYI 552
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ LV YS ++ + + +F++ NR W M+ GYAQ EAL +F+ M +E
Sbjct: 553 SSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENV 612
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKM---RGFEMGAILGTALVHMYTKNGALAK 269
+PN T +VL AC G +E G +H F M G + + +V + ++G ++K
Sbjct: 613 KPNHATFLAVLRACGHMGLVEKG--LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSK 670
Query: 270 AKALFDSMP-ERNIATWNAMISGLASHGHAEEA 301
A L + MP E + W ++S HG+ E A
Sbjct: 671 ALELIEGMPFEADAVIWRTLLSXCKIHGNVEVA 703
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 206/496 (41%), Gaps = 82/496 (16%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
SS + P S + +C L KQ HA+MI++ F + L+ S
Sbjct: 33 SSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCS- 91
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY---------------MNMR 107
DL +A ++F+ + + WN ++ A + A L+ M
Sbjct: 92 -DLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMG 150
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL----HVVNCLVRCYSVS 163
R G ++ TF VLK+CS++ QIH K G D D+ +++ +C +
Sbjct: 151 RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQN 210
Query: 164 SDLNNARQVFDEIR---------------------------------------------- 177
DL ++F E++
Sbjct: 211 DDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLF 270
Query: 178 ----NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ-SGCL 232
N L + +I GYA+S + EAL +F + G + V+L+ ACA G L
Sbjct: 271 NSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDL 330
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
E G +VH + + A++ MY K GAL +A +F+ M R+ +WNA+I+
Sbjct: 331 E-GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAH 389
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEP 351
+G+ E+ L LF + + + P++ T+ VL AC ++ G +I +K G++
Sbjct: 390 EQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDS 449
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ ++D+ +CG + +AE+L R+ + VV W A+++ E A++ ++
Sbjct: 450 FVGI--ALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKM 506
Query: 412 IAL--EPNNHGVYVVL 425
+ + +P+N +L
Sbjct: 507 LEMGVDPDNFTYATIL 522
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIHAQ+I D + +S L+ S G++ +F + + WN ++ A
Sbjct: 535 KQIHAQIIKKELQSDAYISSTLVDM--YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYA 592
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL-NCCKQIHTHVSKSGLDLDL 150
++A+ ++ M+ PN TF VL+AC ++ + H+ +S GLD L
Sbjct: 593 QHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQL 652
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMIS 189
+C+V S ++ A ++ + + V W T++S
Sbjct: 653 EHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 225/380 (59%), Gaps = 17/380 (4%)
Query: 69 TRLFNSIQSPNHF--------MWNTLIRA----QASSLNPDKA-IFLYMNMRRTGFAPNQ 115
TRL +S HF +WNTLIRA +A P + I +++ MR G P+
Sbjct: 5 TRLISSTHPTLHFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDF 64
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
HTF F+L++ ++ L+ + +H + + GL +D V L+ YS S ++ AR +F
Sbjct: 65 HTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAV 124
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF---EPNSVTLASVLSACAQSGCL 232
+ R + W+ MI+GY + + EAL LF +M M G PN T++ VL+AC + G L
Sbjct: 125 MPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGAL 184
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM-PERNIATWNAMISG 291
E G+ H ++ G + +LGTAL+ MY K G++ KA +F ++ P +++ W+AMISG
Sbjct: 185 EHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISG 244
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
LA HG AEE + LF K+ + + PN +TF+ V AC H G + G+ M Y I P
Sbjct: 245 LAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIP 304
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
I+HYGCMVDL GR G++ EA ++K M +PDV++WGALL+ + HG+IE E +K++
Sbjct: 305 TIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKL 364
Query: 412 IALEPNNHGVYVVLSNMYAE 431
I LEP N G YV+LSN+YA+
Sbjct: 365 IELEPTNSGAYVLLSNVYAK 384
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 16/291 (5%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+H + +HAQ++ D F + L++ SSSG + A LF + N W+ +I
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISM--YSSSGLVDMARNLFAVMPERNVISWSCMI 137
Query: 88 RAQASSLNPDKAIFLYMNMRRTG---FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+A+ L+ M+ G PN+ T + VL AC + +L K H ++ K
Sbjct: 138 NGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKC 197
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-RNRTLNVWTTMISGYAQSFRANEALML 203
G+ +D+ + L+ Y+ + A VF + N+ + W+ MISG A A E + L
Sbjct: 198 GMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGL 257
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT-----ALV 258
F +M+ +G PN+VT +V AC G + G+ +++ R E +I+ T +V
Sbjct: 258 FSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD---YLR-RMTEDYSIIPTIQHYGCMV 313
Query: 259 HMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKL 308
+Y + G + +A + SMP E ++ W A++SG HG E +KL
Sbjct: 314 DLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKL 364
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/400 (37%), Positives = 240/400 (60%), Gaps = 3/400 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
++ H +++ + D F + L+ F + G A +F+ + WN +I A
Sbjct: 131 RRFHCEVLKNGFGSDLFVINALIQF--YHNCGSFGCACDVFDESTVRDVVTWNIMINAHL 188
Query: 92 SSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ +KA L M + P++ T ++ AC+ + +L K +H++ + GLD +L
Sbjct: 189 NKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENL 248
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V N ++ Y D+ +A++VF+ IR + + WT+M+SG A+S EAL LF +M +
Sbjct: 249 RVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLN 308
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
E + +TL VLSACAQ+G L+ G+ +H+ + +L TALV MY K G++ A
Sbjct: 309 KIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLA 368
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F M RN+ TWNA+I GLA HGH E+A+ LF ++E ++++P+D+TF+ +L AC HA
Sbjct: 369 LQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHA 428
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G +D G +F +MK + IEP++EHYGC+VDLL R KV +A I+ M K + V+W
Sbjct: 429 GLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWAT 488
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
LL AC++ G+ ++AE++ + +I LEP++ G YV+LSN+YA
Sbjct: 489 LLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYA 528
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 220/388 (56%), Gaps = 3/388 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+ L C S+ + KQ HA ++ + + + +S+L++F ALS SGDL+YA +LF +Q+
Sbjct: 14 VDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQN 73
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F+ NT+IR A S NP +A+ LY M G + +T+ FVL AC+ + ++ ++
Sbjct: 74 PDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRF 133
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H V K+G DL V+N L++ Y A VFDE R + W MI+ + +
Sbjct: 134 HCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLS 193
Query: 198 NEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+A L D+M ++ P+ VT+ S++ ACAQ G LE G+ +H + K G + + A
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNA 253
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
++ MY K + A+ +F+ + E+++ +W +M+SGLA G+ +EAL LF+K++ +I +
Sbjct: 254 ILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELD 313
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+IT VGVLSAC G +D G+ I + + + I + +VD+ +CG + A ++
Sbjct: 314 EITLVGVLSACAQTGALDQGKYIHLLIDK-FEINCDLVLETALVDMYAKCGSIDLALQVF 372
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVA 404
+RM + +V W AL+ HG+ E A
Sbjct: 373 RRMRVR-NVFTWNALIGGLAMHGHGEDA 399
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 247/457 (54%), Gaps = 14/457 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ IH Q + ++ F A+ L + G L Y F +++ + W T++ A
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTM--YNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYI 294
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
D + + MR + PN++TF+ V+ C+N L +Q+H HV G L
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N ++ YS +L + +VF ++ R + W+T+I+ Y+Q EA +M EG
Sbjct: 355 VANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEG 414
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+PN LASVLS C LE G+++H V G E +++ +AL+ MY K G++A+A
Sbjct: 415 PKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEAS 474
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F + +I +W AMISG A HGH++EA++LF ++K + P+ +TF+GVL+AC HAG
Sbjct: 475 KIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAG 534
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+G F SM + Y I P EHYGCM+DLL R G++ +AE LI+ M + D V+W L
Sbjct: 535 MVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTL 594
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGL 451
L AC+ HG+++ +R E++ L+PN G ++ L+N++A K I + L
Sbjct: 595 LRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRM-------L 647
Query: 452 ASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIP 488
+ +++ P + S + + F ++G+ + P
Sbjct: 648 MKSKGVVKEPGWSSVKV-----KDSVFAFVSGDRSHP 679
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 173/360 (48%), Gaps = 8/360 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++ + ++F+ + + N W +I + + + + M R+ + + + L
Sbjct: 165 GEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KA ++ +LN + IHT K G D + V N L Y+ L+ F ++R +
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVV 284
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WTT+++ Y Q + + L F +M PN T ++V+S CA L+ GE++H V
Sbjct: 285 SWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHV 344
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
GF + +++ +Y+K G LA +F SM R+I TW+ +I+ + G+ EEA
Sbjct: 345 LCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAF 404
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ ++ E PN+ VLS C ++ G+Q+ + V G+E ++ +
Sbjct: 405 EYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSV-GLEQTSMVCSALIIM 463
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALEPNN 418
+CG + EA ++ WK D++ W A+++ HG+ IE+ E + K + L P++
Sbjct: 464 YAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQK--VGLRPDS 520
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 159/371 (42%), Gaps = 5/371 (1%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHT 117
L + L A LF+ + + W +I +S + +A+ L+ MR ++ +
Sbjct: 59 LVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFL 118
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ LK C + +H K GL + V + L+ Y ++ + +VFDE+
Sbjct: 119 LSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMP 178
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R WT +I+G ++ + L F M E +S A L A A SG L G
Sbjct: 179 TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRS 238
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +GF+ + + +L MY K G L F M ++ +W +++ G
Sbjct: 239 IHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK 298
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+ L F+++ ++PN+ TF V+S C + + G Q+ + V G +
Sbjct: 299 EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCV-GFVNALSVAN 357
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL--E 415
++ L +CG++ ++ M ++ D++ W ++AA G E A + + + +
Sbjct: 358 SIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 416 PNNHGVYVVLS 426
PN + VLS
Sbjct: 417 PNEFALASVLS 427
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 11/285 (3%)
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+DL N ++ ++ L +AR +FD++ R WT +ISGY S ++EAL LF +M
Sbjct: 47 VDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKM 106
Query: 208 LMEG---FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
++ +P ++L L C G +H F G +G+AL+ MY K
Sbjct: 107 RLQSELRIDPFLLSLG--LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKI 164
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + ++ +FD MP RN TW A+I+GL G++E L F + + ++ + + L
Sbjct: 165 GEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIAL 224
Query: 325 SACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
A +G ++ GR I ++K+ G + + + +CGK+ ++M
Sbjct: 225 KASADSGALNHGRSIHTQTLKK--GFDENSFVANSLTTMYNKCGKLDYGLHTFRKMR-TL 281
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
DVV W ++ A G + + K + A + PN + V+S
Sbjct: 282 DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVIS 326
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 257/461 (55%), Gaps = 35/461 (7%)
Query: 6 SSLRQPPLPIPP--LSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAF---- 56
SSL + +PP + L+ C + Q KQ+H I+ + D F + L+ F
Sbjct: 74 SSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKN 133
Query: 57 ----CAL---------------------SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
CA+ S SGD+ A RLF+ + WN++I A
Sbjct: 134 GDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYA 193
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+A+ L+ M G PN T + C+ L K + +++ L ++
Sbjct: 194 HGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMI 252
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V L+ Y ++ AR+ FD ++ R + W+TMI+GYAQ+ R +E+L LF++M
Sbjct: 253 VHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATS 312
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+PN VTL VLSACAQ G ELG ++ V+ + + + LG+AL+ MYTK G + +A+
Sbjct: 313 CKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRAR 372
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
++F+ M + + TWN+M+ GLA +G A++A+ L++++ +E + PN+ITFV +L+AC HAG
Sbjct: 373 SVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAG 432
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G F MK ++ + P++EH C+VDLL + G++ EA + I M +P+ V+W L
Sbjct: 433 LVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTL 492
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L+AC+ H ++E+A+ +++ LEP+N +YV+LSN+YA+A
Sbjct: 493 LSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADA 533
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 195/394 (49%), Gaps = 38/394 (9%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
LS + A LF+++ P + TLI A + + + + + ++ R G
Sbjct: 29 LSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCV 88
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGL------------------DLDLHV-------- 152
V+K+C+ + + KQ+H H GL D+D V
Sbjct: 89 PLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPV 148
Query: 153 -----VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+NCL+ YS S D+ AR++FD + RT W +MI+ YA EAL LF +M
Sbjct: 149 KDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRM 208
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L EG PN++T+A++ S CA++G LE G+ + + + I+ TAL+ MY K A+
Sbjct: 209 LSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCRAI 267
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A+ FD M +R++ W+ MI+G A +G E+L+LF +++ PN++T VGVLSAC
Sbjct: 268 DEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSAC 327
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
G ++G QI GS + P + G ++D+ +CG V A + RM K V+
Sbjct: 328 AQLGSDELGGQI-GSHVESQNL-PLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV-VI 384
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIA--LEPNN 418
W +++ +G + A + KE+ ++PN
Sbjct: 385 TWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNE 418
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 254/419 (60%), Gaps = 10/419 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASR--LLAFCALSSSGDLSYATRLFNSI 75
+LL KC S Q+KQ+ A +II+ HF++SR LL CA+SS GDLSYA +F I
Sbjct: 4 FNLLLQKCSSFSQIKQLQANLIINGDF--HFSSSRTKLLELCAISSFGDLSYALHIFRYI 61
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNC 133
P+ WN +IR A S +P A+F Y M + + T +F LKAC+ + +
Sbjct: 62 PYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSE 121
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
Q+H+ + + G + D+ + L+ Y+ DL+ A+++FDE+ + W +I+G+AQ
Sbjct: 122 AIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQ 181
Query: 194 SFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
R +A+M F +M ++G PN+VT+ L AC+Q G L+ GE VH ++ +
Sbjct: 182 GSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQ 241
Query: 253 LGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+ ++ MY K G++ KA +F++M ++++ TWN MI A HG +ALDLF KL +
Sbjct: 242 VCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRS 301
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
+ P+ ++++ VL AC HAG ++ G ++F SM + G+EP I+HYG MVDLLGR G++ E
Sbjct: 302 GMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQ-RGLEPNIKHYGSMVDLLGRAGRLKE 360
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
A +++ + + P++V+W LL AC+ +G++E+AE ++++ + + G +V+LSN+YA
Sbjct: 361 AYDIVSSLPF-PNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYA 418
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 237/436 (54%), Gaps = 32/436 (7%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
MH+++Q+HAQ ++S + H R L ++ S ++SYA +F I + F++NT+I
Sbjct: 1 MHEVRQLHAQFVVSGLLNHHSLCGRRLLESYVTMS-EISYARSIFERIPYLDVFVYNTMI 59
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R P ++ L+ + P+ +T+TFVLKACSN ++L KQ+H + K+G+
Sbjct: 60 RGLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGIS 119
Query: 148 LDLHVVNCLVRCYSVSSDL-------------------------------NNARQVFDEI 176
+ H+ + L+ Y+ S + + AR +FD++
Sbjct: 120 PNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQM 179
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+ + + W+ +I+G ++ EAL LF+ M++ PN L S+LSACA G L G
Sbjct: 180 KAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGR 239
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H ++ G +M L TAL+ MY K G + F MP R+I TW A+ISG A +G
Sbjct: 240 WIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYG 299
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
A++ +LF ++ + I PN + FV +LSAC HAG+++ G+ F M GI P IEHY
Sbjct: 300 QAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHY 359
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GCMVDLLGR G++ EAEE I M KP+ V+WG++L+AC+ H ++ + +I LEP
Sbjct: 360 GCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELEP 419
Query: 417 NNHGVYVVLSNMYAEA 432
+ Y + M+ A
Sbjct: 420 RSGDRYKLAGLMFGNA 435
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 255/475 (53%), Gaps = 63/475 (13%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
S L C ++ LKQIHA MI+ + A L+ +++ SG ++YA +LF I P
Sbjct: 17 SQLWRSCTTIGTLKQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEP 76
Query: 79 NHFMWNTLIRAQASS-----------------LNPDKAIFLYM----------------- 104
+ FMWNT+IR A S + PDK F ++
Sbjct: 77 DTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVH 136
Query: 105 -NMRRTGFAPN---QHTFTFVLKACSNV---RSL-----------------NCCKQIHTH 140
+ R GF N ++T + C ++ R+L ++
Sbjct: 137 GRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELG 196
Query: 141 VSKSGLD----LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
V++ D DL N ++ Y+ ++ +AR++FDE+ R + W MI+GY
Sbjct: 197 VARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGS 256
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMGAILGT 255
+AL +F++M G P+ VT+ S+LSAC G L+ G+++H + GF ++ +LG
Sbjct: 257 NQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGN 316
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
AL+ MY K G++ +A +F M E++++TWN+++ GLA HGHAE+++ LF ++ K +I P
Sbjct: 317 ALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRP 376
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
++ITFVGVL AC HAG ++ GRQ F M+ Y IEP I HYGCMVDLLGR G + EA +
Sbjct: 377 DEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDF 436
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
I M +P+ ++W LL AC+ HGN+E+ R +++ + + G YV+LSN+YA
Sbjct: 437 IDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYA 491
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 157/373 (42%), Gaps = 68/373 (18%)
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV--SS 164
R T +P++ + + ++C+ + +L KQIH + G + + + L+ S+ S
Sbjct: 5 RLTDKSPSRQQRSQLWRSCTTIGTL---KQIHASMIVKGFNSNTSALRELIYASSIAISG 61
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
+ A Q+F I +W TMI G AQS A+ L+ QM P+ T VL
Sbjct: 62 TMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLK 121
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM------------------------ 260
AC + +++G VH V GFE + L++
Sbjct: 122 ACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVA 181
Query: 261 -------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
Y + G L A+ LFD MP +++ +WN MI+G A G E A LF ++ K +
Sbjct: 182 WSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDV 241
Query: 314 V-------------------------------PNDITFVGVLSACCHAGFIDVGRQIFGS 342
V P+++T + +LSAC G +D G++I
Sbjct: 242 VTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCC 301
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ + + + ++D+ +CG ++ A E+ + M K DV W ++L HG+ E
Sbjct: 302 ISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREK-DVSTWNSVLGGLAFHGHAE 360
Query: 403 VAERVVKEIIALE 415
+ + E+ L+
Sbjct: 361 KSIHLFTEMRKLK 373
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 225/405 (55%), Gaps = 31/405 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L S G+L A +LF+ + WN++I D+A LY M P++ T
Sbjct: 200 LVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTM 259
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
V+ A + + +L +++H + + GL+L + + N L+ Y ++ A+ +F+ +
Sbjct: 260 IGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTK 319
Query: 179 RTLNVWTTMISGYA-------------------------------QSFRANEALMLFDQM 207
+T+ WTTM+ GYA Q+ R+ EAL LF +M
Sbjct: 320 KTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEM 379
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
P+ +T+ + LSAC+Q G L++G +H +V M LGTALV MY K G +
Sbjct: 380 QASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNI 439
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
KA +F+ MP RN TW A+I GLA HG A+ F ++ +VP++ITF+GVLSAC
Sbjct: 440 KKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSAC 499
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
CH G +D GR F M YGI PK++HY C+VDLLGR G + EAEELI+ M ++PD V+
Sbjct: 500 CHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVV 559
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WGAL + HGN+ + ER +++ L+P++ G+YV+L+NMY +A
Sbjct: 560 WGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDA 604
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 217/431 (50%), Gaps = 35/431 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL + C SM ++K+IHAQMI + I D FA SRL+AFCA+S +L Y ++ N+
Sbjct: 56 PLLSLL-EACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNA 114
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCC 134
+ N F WN IR S NP A+ LY NM R G A P+ +T+ + K C+
Sbjct: 115 ANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTA 174
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+I HV + G D DL V N ++ +L AR++FDE R L W ++I+GY +
Sbjct: 175 NEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRC 234
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH--------------- 239
A+EA L+ +M P+ VT+ V+SA AQ L LG K+H
Sbjct: 235 GLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLA 294
Query: 240 -----VFVKMRGFEMGAIL-----------GTALVHMYTKNGALAKAKALFDSMPERNIA 283
+++K + E IL T +V Y K G L A LF+ MPE+++
Sbjct: 295 NALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVV 354
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
WNA+I G ++EAL LF +++ + P+ IT V LSAC G +DVG + +
Sbjct: 355 LWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYV 414
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ + + + +VD+ +CG + +A ++ + M + + + W A++ HG
Sbjct: 415 DK-HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQPHA 472
Query: 404 AERVVKEIIAL 414
A E+I++
Sbjct: 473 AISYFSEMISI 483
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 21 LADKCKSMH-QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
LA+ M+ + K I A I+ + S + G L A RLFN + +
Sbjct: 293 LANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKD 352
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+WN LI + +A+ L+ M+ + AP++ T L ACS + +L+ +H
Sbjct: 353 VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHH 412
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+V K L +++ + LV Y+ ++ A QVF+E+ R WT +I G A + +
Sbjct: 413 YVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHA 472
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKMRGFEMGAILGTALV 258
A+ F +M+ G P+ +T VLSAC G ++ G + + G + LV
Sbjct: 473 AISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLV 532
Query: 259 HMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGH 297
+ + G L +A+ L SMP E + W A+ G HG+
Sbjct: 533 DLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGN 572
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 225/405 (55%), Gaps = 31/405 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L S G+L A +LF+ + WN++I D+A LY M P++ T
Sbjct: 200 LVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTM 259
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
V+ A + + +L +++H + + GL+L + + N L+ Y ++ A+ +F+ +
Sbjct: 260 IGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTK 319
Query: 179 RTLNVWTTMISGYA-------------------------------QSFRANEALMLFDQM 207
+T+ WTTM+ GYA Q+ R+ EAL LF +M
Sbjct: 320 KTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEM 379
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
P+ +T+ + LSAC+Q G L++G +H +V M LGTALV MY K G +
Sbjct: 380 QASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNI 439
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
KA +F+ MP RN TW A+I GLA HG A+ F ++ +VP++ITF+GVLSAC
Sbjct: 440 KKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSAC 499
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
CH G +D GR F M YGI PK++HY C+VDLLGR G + EAEELI+ M ++PD V+
Sbjct: 500 CHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVV 559
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WGAL + HGN+ + ER +++ L+P++ G+YV+L+NMY +A
Sbjct: 560 WGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDA 604
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 217/431 (50%), Gaps = 35/431 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL + C SM ++K+IHAQMI + I D FA SRL+AFCA+S +L Y ++ N+
Sbjct: 56 PLLSLL-EACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNA 114
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCC 134
+ N F WN IR S NP A+ LY NM R G A P+ +T+ + K C+
Sbjct: 115 ANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTA 174
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+I HV + G D DL V N ++ +L AR++FDE R L W ++I+GY +
Sbjct: 175 NEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRC 234
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH--------------- 239
A+EA L+ +M P+ VT+ V+SA AQ L LG K+H
Sbjct: 235 GLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLA 294
Query: 240 -----VFVKMRGFEMGAIL-----------GTALVHMYTKNGALAKAKALFDSMPERNIA 283
+++K + E IL T +V Y K G L A LF+ MPE+++
Sbjct: 295 NALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVV 354
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
WNA+I G ++EAL LF +++ + P+ IT V LSAC G +DVG + +
Sbjct: 355 LWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYV 414
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ + + + +VD+ +CG + +A ++ + M + + + W A++ HG
Sbjct: 415 DK-HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAIICGLALHGQPHA 472
Query: 404 AERVVKEIIAL 414
A E+I++
Sbjct: 473 AISYFSEMISI 483
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 21 LADKCKSMH-QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
LA+ M+ + K I A I+ + S + G L A RLFN + +
Sbjct: 293 LANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKD 352
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+WN LI + +A+ L+ M+ + AP++ T L ACS + +L+ +H
Sbjct: 353 VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHH 412
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+V K L +++ + LV Y+ ++ A QVF+E+ R WT +I G A + +
Sbjct: 413 YVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHA 472
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKMRGFEMGAILGTALV 258
A+ F +M+ G P+ +T VLSAC G ++ G + + G + LV
Sbjct: 473 AISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLV 532
Query: 259 HMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGH 297
+ + G L +A+ L SMP E + W A+ G HG+
Sbjct: 533 DLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGN 572
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 263/504 (52%), Gaps = 84/504 (16%)
Query: 9 RQPPLPIPPLSLLAD-----------KCK---SMHQLKQIHAQMIISS--RIQDHFAASR 52
R PL + L++L D +C SM QL +I AQ+I S I + A +
Sbjct: 4 RSSPLLVITLAVLHDYNHRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVK 63
Query: 53 LLAFCALSSSGDLSYATRLFNSIQS-PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGF 111
+ SS G+L ++ +FN S PN F +N L++A + I + N
Sbjct: 64 FIGVS--SSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPN 121
Query: 112 APN--QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV------------VNC-- 155
APN ++TFT VLKAC+ + + +++H V+K G + +L V NC
Sbjct: 122 APNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIA 181
Query: 156 -----------------LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
L+ Y S ++ AR VFD + + L W+TMISGYA+
Sbjct: 182 QKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLE 241
Query: 199 EALMLFDQMLME--------------------------------GFEPNSVTLASVLSAC 226
EA LF+ M M G PN VTL SVLSAC
Sbjct: 242 EARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSAC 301
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A G L+LG+ +H F++ E+G LG AL MY K G + +AK +F M ER++ +W+
Sbjct: 302 AHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWS 361
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+I GLA +G+A EA + F ++ ++ + PNDI+F+G+L+AC HAG +D G + F M +V
Sbjct: 362 IIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQV 421
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
YGI PKIEHYGC+VDLL R G++ +AE LI M +P+V++WGALL C+ + + E ER
Sbjct: 422 YGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGER 481
Query: 407 VVKEIIALEPNNHGVYVVLSNMYA 430
VV I+ L+ N+ G V L+N+YA
Sbjct: 482 VVWRILELDSNHSGSLVYLANVYA 505
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 257/449 (57%), Gaps = 43/449 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG--DLSYATRLFNSIQS- 77
L K S+ Q+KQIHAQ++ Q+ + LL S G +LS+A +F+ S
Sbjct: 61 LLKKRPSLTQIKQIHAQVVTHGLAQN----TSLLGPLIHSYIGCRNLSFARIVFDQFPSL 116
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNCC- 134
P +WN +I+A + + + ++++L+ M G + +++TFTFV ACS +L
Sbjct: 117 PPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYG 176
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA-- 192
+ +H V K G + D+ V N LV YS+ S + +A++VFDE+ R + WT+++ GYA
Sbjct: 177 ENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMR 236
Query: 193 -QSFRA----------------------------NEALMLFDQMLM-EGFEPNSVTLASV 222
+ RA NEAL F+ ML + +PN L S+
Sbjct: 237 GELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSI 296
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSACA G L+ G+ +HV++ + + + TAL+ MY K G + A+ +FD + +R++
Sbjct: 297 LSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDL 356
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TW +MISGL+ HG E L F ++ E P+DIT +GVL+ C H+G ++ G IF
Sbjct: 357 LTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHD 416
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M ++GI PK+EHYGC++DLLGR G++ A E IK M +PDVV W ALL+AC+ HG+++
Sbjct: 417 MIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVD 476
Query: 403 VAERVVKEIIALEPNNH-GVYVVLSNMYA 430
+ ER++ I L P +H G YV+LSN+YA
Sbjct: 477 LGERIINHIAELCPGSHGGGYVLLSNLYA 505
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 149/328 (45%), Gaps = 51/328 (15%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P+ TF +LK SL KQIH V GL + ++ L+ Y +L+ AR V
Sbjct: 53 PSHSTFVQLLK---KRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109
Query: 173 FDEIRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV---TLASVLSACAQ 228
FD+ + + W MI Y+++ + E+L LF QML G P S T V +AC++
Sbjct: 110 FDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RPTSADKYTFTFVFTACSR 168
Query: 229 SGCLE-LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
L GE VH V G+E +G +LV+MY+ + AK +FD MP+R++ TW +
Sbjct: 169 HPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTS 228
Query: 288 MISGLASHGHAEEALDLFRKLE--------------------------------KEQIVP 315
++ G A G A +LF + +++ P
Sbjct: 229 VVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKP 288
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI----EHYGCMVDLLGRCGKVLE 371
N+ V +LSAC H G +D G+ I VY + +I ++D+ +CG++
Sbjct: 289 NEAVLVSILSACAHLGALDQGKWI-----HVYIDKNRILLSSNISTALIDMYAKCGRIDC 343
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHG 399
A + + K D++ W ++++ HG
Sbjct: 344 ARRVFDGLH-KRDLLTWTSMISGLSMHG 370
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 243/433 (56%), Gaps = 6/433 (1%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGD 64
++LR +P L L A + + HA + + + DH S + + S+ GD
Sbjct: 110 AALRPDAYTLPFLLLAAARAPEPPFARSAHALLCRLGLQAHDHTVHSLVTMY---SNLGD 166
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRA-QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
A R+F+ I + WN +++A + + + D A + APN+ T VL
Sbjct: 167 PLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPNEVTVAVVLA 226
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
AC + L + + V + +++ V + LV Y ++ AR+VFD I ++ +
Sbjct: 227 ACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVA 286
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI+GYAQ+ + EA+ LF M EG P+ +TL VLSACA G LELG ++ +
Sbjct: 287 WNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYAS 346
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
RG +GTALV MY+K G L KA +F +P +N ATWNA+I GLA +G EA+
Sbjct: 347 HRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGHEAIR 406
Query: 304 LFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
F + E+ + P+DITF+GVLSAC HAG + GR+ F S+ + I PKIEHY CMVDL
Sbjct: 407 QFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDL 466
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G + EA + ++++ K D VM GALLAAC+ N+EV+ERV+ I+ LEP+N Y
Sbjct: 467 LARAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCKNVEVSERVINRIMQLEPSNSWNY 526
Query: 423 VVLSNMYAEAESM 435
VV S +YA ++ +
Sbjct: 527 VVSSKIYASSDRL 539
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 215/421 (51%), Gaps = 20/421 (4%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQ------DHFAASRLLAFCALSSSGDLSYATRL 71
+S L +C S+ +KQ+HA ++ + + +HF + L + +++
Sbjct: 17 ISKLHTRCHSLSAMKQLHAHILHLNHHRRRPFPYNHFLSKLLTLSSSAAAADYALLLLAA 76
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
+P F +N +R AS+ P A+ L++ M R P+ +T F+L A +
Sbjct: 77 H---PAPTAFSYNVTLRFFAST-RPRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEP 132
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ H + + GL H V+ LV YS D AR+VFD I R + W M+ Y
Sbjct: 133 PFARSAHALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAY 192
Query: 192 AQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
++ A + +F M+ EG PN VT+A VL+AC +G L LG + +V+ E+G
Sbjct: 193 ERAGMAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVG 252
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+++G+ALV MY K G + +A+ +FD + +++ WNAMI+G A +G ++EA+ LF + +
Sbjct: 253 SLVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQ 312
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
E P+ IT VGVLSAC G +++G ++ + S + +YG + +VD+ +CG
Sbjct: 313 EGASPDKITLVGVLSACAAVGALELGTELDAYASHRGLYG---NVYVGTALVDMYSKCGD 369
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER---VVKEIIALEPNNHGVYVVL 425
+ +A ++ ++ K + W AL+ +G A R V++ L P++ VL
Sbjct: 370 LDKAVQVFGKLPCKNEAT-WNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVL 428
Query: 426 S 426
S
Sbjct: 429 S 429
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 272/528 (51%), Gaps = 26/528 (4%)
Query: 44 IQDHFAASRLLAFCAL---SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAI 100
I+ F L C L S SG+L+ A ++F ++ + W ++I A D ++
Sbjct: 278 IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 337
Query: 101 FLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCY 160
L+ M + G +P+ T T +L AC+ L K +H ++ ++ + DL V N L+ Y
Sbjct: 338 RLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMY 397
Query: 161 SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLA 220
+ + +A VF E++ + + W TMI GY+++ NEAL LF +M +PNS+T+A
Sbjct: 398 AKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMA 456
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
+L ACA LE G+++H + GF + + ALV MY K GAL A+ LFD +PE+
Sbjct: 457 CILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEK 516
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
++ +W MI+G HG+ EA+ F ++ I P++++F+ +L AC H+G +D G F
Sbjct: 517 DLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF 576
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
M+ IEPK EHY C+VDLL R G + +A + IK M +PD +WGALL C+ + +
Sbjct: 577 NMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHD 636
Query: 401 IEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQN 460
+++AE+V + + LEP N G YV+L+N+YAEAE + +++ L ++ GL
Sbjct: 637 VKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWE-EVKKLRERIGRRGLR-------- 687
Query: 461 PDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQYVTASQTIRLPDNGH------AI 514
++P + + + + G+++ P ++ + R+ + GH A+
Sbjct: 688 ---KNPGCSWIEIKGKVHIFVTGDSSHP---LANKIELLLKKTRTRMKEEGHFPKMRYAL 741
Query: 515 QLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCSANANLVVSAPDSH 562
A D + + + P G+ NL V D H
Sbjct: 742 IKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCG-DCH 788
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 175/332 (52%), Gaps = 3/332 (0%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +LF+ + + WN++I S+ +K + L+ M G + T V+ CSN
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
L + +H + K+ +L + NCL+ YS S +LN+A QVF+ + R++ WT+M
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 323
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I+GYA+ ++ ++ LF +M EG P+ T+ ++L ACA +G LE G+ VH ++K
Sbjct: 324 IAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKM 383
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ + AL+ MY K G++ A ++F M ++I +WN MI G + + EAL+LF +
Sbjct: 384 QSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVE 443
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
++ PN IT +L AC ++ G++I G + R G +VD+ +CG
Sbjct: 444 MQYNS-KPNSITMACILPACASLAALERGQEIHGHILR-NGFSLDRHVANALVDMYLKCG 501
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
L L+ M+ + D+V W ++A HG
Sbjct: 502 -ALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 532
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 177/378 (46%), Gaps = 59/378 (15%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
L L AD KS+ ++IH+ +I S+ ++ D S+L+ + GDL R+F+ +
Sbjct: 108 LQLCAD-LKSIQDGRRIHS-IIQSNDVEVDGVLGSKLVFM--YVTCGDLREGRRIFDKVA 163
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+ F+WN L+ A N +++ L+ MR G
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGI------------------------- 198
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+ +AR++FDE+ +R + W +MISGY +
Sbjct: 199 ---------------------------RRVESARKLFDELGDRDVISWNSMISGYVSNGL 231
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+ + L LF+QML+ G + T+ SV++ C+ +G L LG +H + F L
Sbjct: 232 SEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNC 291
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ MY+K+G L A +F++M ER++ +W +MI+G A G ++ ++ LF ++EKE I P+
Sbjct: 292 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPD 351
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
T +L AC G ++ G+ + +K ++ + ++D+ +CG + +A +
Sbjct: 352 IFTITTILHACACTGLLENGKDVHNYIKE-NKMQSDLFVSNALMDMYAKCGSMGDAHSVF 410
Query: 377 KRMVWKPDVVMWGALLAA 394
M K D+V W ++
Sbjct: 411 SEMQVK-DIVSWNTMIGG 427
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 53/244 (21%)
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK-------- 269
T SVL CA ++ G ++H ++ E+ +LG+ LV MY G L +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 270 -----------------------------------------AKALFDSMPERNIATWNAM 288
A+ LFD + +R++ +WN+M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVY 347
ISG S+G +E+ LDLF ++ I + T V V++ C + G + +GR + G ++K +
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
G E + + C++D+ + G + A ++ + M + VV W +++A G +++ R+
Sbjct: 283 GKELTLNN--CLLDMYSKSGNLNSAIQVFETM-GERSVVSWTSMIAGYAREGLSDMSVRL 339
Query: 408 VKEI 411
E+
Sbjct: 340 FHEM 343
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 249/456 (54%), Gaps = 64/456 (14%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
MI ++ QD F ++ ++ C+ S +L A F ++Q+PN ++N LIR +
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINL--AASAFANVQNPNVLVFNALIRGCVHCCYSE 58
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
+A+ YM+M R P ++F+ ++KAC+ + + +H HV K G D + V L+
Sbjct: 59 QALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLI 118
Query: 158 RCYSV-------------------------------SSDLNNARQVFDEIRNRTLNVWTT 186
YS D+ +A ++FDE+ + + W
Sbjct: 119 EFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNA 178
Query: 187 MISGYAQSFRANEALMLFDQM-------------------------------LMEGFEPN 215
MI GY + A A LF+QM + +G P+
Sbjct: 179 MIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPD 238
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
VT+ +V+SACA G L LG++VH+++ ++GF++ +G++L+ MY K G++ A +F
Sbjct: 239 EVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFY 298
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
+ +N+ WN +I GLA+HG+ EEAL +F ++E+++I PN +TF+ +L+AC HAGFI+
Sbjct: 299 KLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEE 358
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
GR+ F SM + Y I P++EHYGCMVDLL + G + +A E+I+ M +P+ +WGALL C
Sbjct: 359 GRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGC 418
Query: 396 KNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
K H N+E+A V+ ++ LEP+N G Y +L NMYAE
Sbjct: 419 KLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAE 454
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 239/409 (58%), Gaps = 3/409 (0%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+C+++ ++Q+HA ++ + +QD A++LL A + D +Y+ LF+ + + W
Sbjct: 12 RCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYS--LFDGLTMRDSKTW 69
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+ ++ A + + + + R G P+ +T FV++ C + L + IH V K
Sbjct: 70 SVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLK 129
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL D V LV Y+ + +A+++F+ + ++ L WT MI YA A E+L+L
Sbjct: 130 HGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC-NAYESLVL 188
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
FD+M EG P+ V + +V++ACA+ G + + ++ GF + ILGTA++ MY K
Sbjct: 189 FDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAK 248
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G++ A+ +FD M E+N+ +W+AMI+ HG ++A+DLF + I+PN +TFV +
Sbjct: 249 CGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSL 308
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC HAG I+ G + F SM + + P ++HY CMVDLLGR G++ EA LI+ M +
Sbjct: 309 LYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEK 368
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
D +W ALL AC+ H +E+AE+ ++ L+P N G YV+LSN+YA+A
Sbjct: 369 DERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKA 417
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 244/447 (54%), Gaps = 40/447 (8%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
K + ++ LKQ+ + +I+S HF +LL FC L +LSYA +F+ PN ++
Sbjct: 33 KSRHLNHLKQVQSFLIVSGLSHSHFLCFKLLRFCTLRLC-NLSYARFIFDRFSFPNTHLY 91
Query: 84 NTLIRAQASSL--NPDKAI-FLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
++ +SSL + A F + + R+ PN + VLK+ + S +HTH
Sbjct: 92 AAVLTGYSSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTPLVHTH 151
Query: 141 VSKSGLDLDLHVVNCLVRCYSVS-SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+ KSG L + V L+ Y+ S S + ARQ+FDE+ R + WT M+SGYA+S
Sbjct: 152 LFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIFN 211
Query: 200 ALMLFDQM--------------------LMEG------------FEPNSVTLASVLSACA 227
A+ LF++M +E PN VTL VLSACA
Sbjct: 212 AVALFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPCIRPNEVTLVCVLSACA 271
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
Q+G L+L + +H F R + +LV +Y K G L +A ++F ++++ WN+
Sbjct: 272 QTGTLQLAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLEEASSVFKMSSKKSLTAWNS 331
Query: 288 MISGLASHGHAEEALDLFR---KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
MI+ A HG +EEA+ +F KL I P+ ITF+G+L+AC H G + GR F MK
Sbjct: 332 MINCFALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMK 391
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ +GIEP+IEHYGC++DLLGR G+ EA E + M + D +WG+LL ACK +G++++A
Sbjct: 392 KRFGIEPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHLDLA 451
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAE 431
E VK ++AL PNN G +++N+Y E
Sbjct: 452 EVAVKNLVALNPNNGGYVAMMANLYGE 478
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 50/364 (13%)
Query: 104 MNMRRTGF----APNQHTFT-----FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
M R T F AP+ H F+ A S R LN KQ+ + + SGL +
Sbjct: 1 MGTRVTQFTYLHAPSSHMAEELVNQFISAAISKSRHLNHLKQVQSFLIVSGLSHSHFLCF 60
Query: 155 CLVR-CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS--FRANEALMLFDQMLMEG 211
L+R C +L+ AR +FD +++ +++GY+ S A+ A F M+
Sbjct: 61 KLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTGYSSSLPLHASSAFSFFRLMVNRS 120
Query: 212 F-EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM---------- 260
F PN VL + VH + GF + ++ TAL+H
Sbjct: 121 FPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITL 180
Query: 261 ----------------------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
Y ++G + A ALF+ MPER++ +WNA+++ +G
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDIFNAVALFEEMPERDVPSWNAILAACTQNGLF 240
Query: 299 EEALDLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EA+ LFR++ + I PN++T V VLSAC G + + + I R + +
Sbjct: 241 VEAVSLFRRMINDPCIRPNEVTLVCVLSACAQTGTLQLAKGIHAFAYR-RNLSSDVFVSN 299
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
+VDL G+CG + EA + K M K + W +++ HG E A V ++++ L N
Sbjct: 300 SLVDLYGKCGNLEEASSVFK-MSSKKSLTAWNSMINCFALHGRSEEAIAVFEDMMKL--N 356
Query: 418 NHGV 421
+H +
Sbjct: 357 SHDI 360
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 241/440 (54%), Gaps = 39/440 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+ +KQ+HA + + + RLL +L YA +LF+ Q+ F++N LI
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLI------PNLVYARKLFDHHQNSCTFLYNKLI 54
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+A P ++I LY + G P+ HTF F+ A ++ S + +H+ +SG +
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D L+ Y+ L AR+VFDE+ R + VW MI+GY + A+ LFD M
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 208 ----------LMEGF----------------------EPNSVTLASVLSACAQSGCLELG 235
++ GF +PN +T+ SVL ACA G LE+G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLAS 294
++ + + GF + A + MY+K G + AK LF+ + +RN+ +WN+MI LA+
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG +EAL LF ++ +E P+ +TFVG+L AC H G + G+++F SM+ V+ I PK+E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGCM+DLLGR GK+ EA +LIK M KPD V+WG LL AC HGN+E+AE + + L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 415 EPNNHGVYVVLSNMYAEAES 434
EP N G V++SN+YA E
Sbjct: 415 EPTNPGNCVIMSNIYAANEK 434
>gi|218193370|gb|EEC75797.1| hypothetical protein OsI_12731 [Oryza sativa Indica Group]
Length = 523
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 237/450 (52%), Gaps = 35/450 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L+LL +C SM L+Q+HA ++ S +D AASR +AFCA D +YA RL
Sbjct: 36 PALTLLHTQCASMAHLRQLHAALVKSGLARDPIAASRAVAFCA-GDGRDAAYAARLVRHH 94
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
PN FMWNT IRA A P A+ L+++M + P + TF + A + +
Sbjct: 95 PRPNAFMWNTAIRALADGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAYARLGRAGDGA 154
Query: 136 QIHTHVSKSGLDLDLHVVNC-----------------LVRCYSV--------------SS 164
+H V K GL D +V N L RC + +
Sbjct: 155 GLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALARAG 214
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ AR VFD + RT+ W+ M+S Y++ R ++A+ LF M EG EPN+ L SVL
Sbjct: 215 RVDEARAVFDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLG 274
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER---N 281
CA G LE G VH ++ M A++ TALV MY K G + KA+ +FD+ R
Sbjct: 275 CCASLGALEQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAK 334
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+++WN+M+ G A HG EA LF +L + P+++TF+ +L A H+G D + +
Sbjct: 335 LSSWNSMMLGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLA 394
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM +G+ P +EHYGC+VD L R G++ EAE +I M PD +WGALL+ C+ HG+
Sbjct: 395 SMASEHGVVPGVEHYGCLVDALARAGRLREAEGVIAAMPVAPDAAVWGALLSGCRLHGDA 454
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
E A R +E + +P + G YV+ ++ A
Sbjct: 455 EAAARAAREAVRCDPRDSGAYVLAASALAR 484
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 234/430 (54%), Gaps = 33/430 (7%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++H ++ + F + L+ +LS G++S A +F+ + WN +I
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSLS--GEVSVARGVFDRSSKGDVVTWNVMISGYN 196
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S D+++ L+ M R P+ T VL ACS ++ LN K++H +V ++
Sbjct: 197 RSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRV 256
Query: 152 VVNCLVRCYSVSSDLNNA-------------------------------RQVFDEIRNRT 180
+ N L+ Y+ D++ A R FD++ R
Sbjct: 257 LENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD 316
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
WT MI GY Q R E L LF +M +P+ T+ S+L+ACA G LELGE +
Sbjct: 317 FVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKA 376
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
++ ++ + +G AL+ MY G + KA +F++MP R+ +W A+I GLA +G+ EE
Sbjct: 377 YIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEE 436
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
ALD+F ++ K I P+++T +GVL AC H+G +D G++ F M +GIEP + HYGCMV
Sbjct: 437 ALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMV 496
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
DLLGR G + EA E+IK M KP+ ++WG+LL AC+ H + E+AE ++I+ LEP N
Sbjct: 497 DLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGA 556
Query: 421 VYVVLSNMYA 430
VYV+L N+YA
Sbjct: 557 VYVLLCNIYA 566
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 222/416 (53%), Gaps = 39/416 (9%)
Query: 11 PPLP-IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P LP PPLSL+ CKSM QLKQIH+Q I + I + ++++AFC GD+ YA
Sbjct: 15 PSLPQTPPLSLIK-TCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYAR 73
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+F+++ PNHF+WN +I+ + P+ A+ +Y M G P+++T+ F+LK +
Sbjct: 74 MVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDT 133
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
++ C +++H H+ K G ++ V N L+ YS+S +++ AR VFD + W MIS
Sbjct: 134 AVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMIS 193
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY +S + +E++ LFD+M P+S+TL SVLSAC++ L +G++VH +VK E
Sbjct: 194 GYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEP 253
Query: 250 GAILGTALVHMY-------------------------------TKNGALAKAKALFDSMP 278
+L AL+ MY T G + A+ FD MP
Sbjct: 254 VRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMP 313
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
ER+ +W AMI G +E L LFR+++ I P++ T V +L+AC H G +++G
Sbjct: 314 ERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEW 373
Query: 339 IFGSMKRVYGIEPKIEHY--GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
I + + E KI+ + ++D+ CG V +A + M + D + W A++
Sbjct: 374 IKAYIDKN---EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHR-DKISWTAVI 425
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/389 (40%), Positives = 222/389 (57%), Gaps = 34/389 (8%)
Query: 78 PNHFMWNTLIRAQASSLNPDKAIF-LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
P F++N LI+A +S F LY +R GF PNQHTF F+ AC+++ S + +
Sbjct: 9 PTLFLYNKLIQAYSSHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSLSSSSLGQM 68
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR------------------- 177
+HTH KSG + DL L+ Y+ L AR++FDE+
Sbjct: 69 LHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPRWNAMMAGLARFGD 128
Query: 178 ------------NRTLNVWTTMISGYAQSFRANEALMLFDQMLME-GFEPNSVTLASVLS 224
+R + WTTMISGY+ + + ++AL LF M E G PN+VTL S+L
Sbjct: 129 MDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPNAVTLVSILP 188
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE-RNIA 283
ACA LE+G++V + + GF A++ MY K G + A +F+ + RN+
Sbjct: 189 ACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRVFNEIGSLRNLC 248
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN+M+ GLA HG +AL+L+ ++ E P+D+TFVG+L AC G + GR IF S
Sbjct: 249 SWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVKKGRHIFKSK 308
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ I PK+EHYGCMVDLLGR G++ EA E+I+ M KPD V+WGALL AC HGN+E+
Sbjct: 309 TTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGACSFHGNVEL 368
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AE + + LEP N G YV+LSN+YA A
Sbjct: 369 AEIAAESLFVLEPWNPGNYVILSNIYASA 397
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 8/250 (3%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQH 116
L+ GD+ A LF S+ S N W T+I + + DKA+ L++ M + G PN
Sbjct: 122 GLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPNAV 181
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T +L AC+N+ +L +++ + K+G + + N ++ Y ++ A +VF+EI
Sbjct: 182 TLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRVFNEI 241
Query: 177 RN-RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ R L W +M+ G A +AL L+DQML EG P+ VT +L AC Q G ++ G
Sbjct: 242 GSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVKKG 301
Query: 236 EKVHVF-VKMRGFEMGAILG--TALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISG 291
H+F K F + L +V + + G L +A + SM + + W A++
Sbjct: 302 R--HIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGA 359
Query: 292 LASHGHAEEA 301
+ HG+ E A
Sbjct: 360 CSFHGNVELA 369
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/402 (37%), Positives = 236/402 (58%), Gaps = 2/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H ++ + D + LL + GD + R+F + + W+ +I A
Sbjct: 162 KSVHGCVLKTCYEMDLYVGVGLLDL--YTKFGDANDVLRVFEEMPKHDVIPWSFMISRYA 219
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S +A+ L+ MRR PNQ TF VL++C+++ +L KQ+H HV K GLD ++
Sbjct: 220 QSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVF 279
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y+ L+N+ ++F E+ NR W TMI GY QS ++AL L+ ML
Sbjct: 280 VSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQ 339
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+ + VT +SVL ACA +ELG ++H ++ ++G AL+ MY K G++ A+
Sbjct: 340 VQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR 399
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD + ER+ +WNAMISG + HG EAL F+ +++ + VPN +TFV +LSAC +AG
Sbjct: 400 LVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAG 459
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+G+ F SM + YGIEP +EHY CMV LLGR G + +A +LI+ + +P+V +W AL
Sbjct: 460 LLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRAL 519
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
L AC H ++++ ++I+ ++P + +V+LSN+YA
Sbjct: 520 LGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTR 561
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 182/343 (53%), Gaps = 4/343 (1%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A + G ++ A + F++I + W ++ A + ++ L+ MR GF PN T
Sbjct: 85 AYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFT 144
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F VLKAC + + + K +H V K+ ++DL+V L+ Y+ D N+ +VF+E+
Sbjct: 145 FAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP 204
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ W+ MIS YAQS ++ EA+ LF QM PN T ASVL +CA L+LG++
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQ 264
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH V G + + AL+ +Y K G L + LF +P RN TWN MI G G
Sbjct: 265 VHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGD 324
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHY 356
++AL L++ + + Q+ +++T+ VL AC +++G QI S+K +Y + + +
Sbjct: 325 GDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGN- 383
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
++D+ +CG + A L+ M+ + D + W A+++ HG
Sbjct: 384 -ALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAMISGYSMHG 424
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 165/328 (50%), Gaps = 2/328 (0%)
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
TLI+ S D+ + L+ + R G N FT +LK +V +H + K
Sbjct: 11 TLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKL 70
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G + + V L+ Y+V +N+ARQ FD I + + WT M++ YA++ R ++L LF
Sbjct: 71 GHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLF 130
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M M GF PN T A VL AC +G+ VH V +EM +G L+ +YTK
Sbjct: 131 AEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKF 190
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G +F+ MP+ ++ W+ MIS A + EA++LF ++ + ++PN TF VL
Sbjct: 191 GDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVL 250
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
+C + +G+Q+ + +V G++ + ++D+ +CG++ + +L + + +
Sbjct: 251 QSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNE 309
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEII 412
V W ++ G+ + A + K ++
Sbjct: 310 VT-WNTMIVGYVQSGDGDKALSLYKNML 336
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+R + T+I GY QSF+ +E + LF ++ EG E N ++L C EL
Sbjct: 3 DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYS 62
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H + G E A +GTAL+ Y G++ A+ FD++ +++ +W M++ A +
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHY 356
+++L LF ++ PN TF GVL AC VG+ + G +K Y ++ +
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV--- 179
Query: 357 GC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
G ++DL + G + + + M K DV+ W +++
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMP-KHDVIPWSFMIS 216
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 223/388 (57%), Gaps = 62/388 (15%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCY----- 160
M + +P TF+ ++KACS V L + +H H+ K G D + V LV Y
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 161 --------------------------SVSSDLNNARQVFDEIR----------------- 177
+ + D+++ARQ+FDE+
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 178 --------------NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
NR + WTTMI+ Y+Q+ + EAL +F++M G +P+ VT+A+++
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACA G L+LG+++H++ GF++ +G+AL+ MY K G+L K+ +F + ++N+
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLF 240
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
WN++I GLA HG+AEEAL +F ++++E+I PN +TF+ VL AC HAG ++ GR+ F SM
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSM 300
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
R + I P+IEHYGCMVDLLG+ G + +A EL++ M +P+ V+WGALL CK H N+++
Sbjct: 301 SRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKI 360
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAE 431
A+ V E LEPNN G Y +L NMYAE
Sbjct: 361 AQVAVNESKVLEPNNSGYYTLLVNMYAE 388
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 6/232 (2%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF+ + + + W T+I + + +A+ ++ M+ G P++ T ++ AC++
Sbjct: 126 AELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAH 185
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ +L+ K+IH + + G DLD+++ + L+ Y+ L+ + VF ++R + L W ++
Sbjct: 186 LGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSI 245
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM-RG 246
I G A A EAL +F +M E +PN VT SVL AC +G +E G K F+ M R
Sbjct: 246 IEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRK--RFLSMSRD 303
Query: 247 FEMGAILG--TALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASH 295
F + + +V + K G L A L SM E N W A++ G H
Sbjct: 304 FSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLH 355
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH + D + S L+ A G L + +F ++ N F WN++I A
Sbjct: 193 KEIHLYAMEMGFDLDVYIGSALIDMYA--KCGSLDKSLVVFFKLRKKNLFCWNSIIEGLA 250
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS-GLDLDL 150
++A+ ++ M+R PN TF VL AC++ + ++ +S+ + ++
Sbjct: 251 VHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEI 310
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMISG 190
C+V + L +A ++ +R +V W ++ G
Sbjct: 311 EHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGG 351
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 233/414 (56%), Gaps = 3/414 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L+++A + ++ + IHA ++ S + ++ +G + A F+ +Q
Sbjct: 369 LAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGM--YVKTGAVQDAILAFDLMQG 426
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ WNTL+ S N + + ++ + G N++T+ +L+ C+++ L Q+
Sbjct: 427 PDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQV 486
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H V KSG D V L+ Y + NAR VFD ++ R + WT ++S YA++
Sbjct: 487 HACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEG 546
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
+A+ F ML E PN TLA+ LS C+ CL G ++H + G+ +++ +AL
Sbjct: 547 EKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWN-SSVVSSAL 605
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G LA A+ LFD ++ WN +I G A HGH +AL+ F+++ E VP++
Sbjct: 606 VDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDE 665
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
ITFVGVLSAC HAG +D GR+ F + VYGI P +EHY CMVD+L + GK+ EAE LI
Sbjct: 666 ITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLIN 725
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
M PD +W +L AC+ HGNIE+AER +++ +P++ ++LSN+YA+
Sbjct: 726 EMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYAD 779
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 151/348 (43%), Gaps = 9/348 (2%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +F I P+ + +I +A ++M M G PNQ+TF + S
Sbjct: 316 AYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASR 375
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+N C+ IH H+ KSG V + +V Y + + +A FD ++ + W T+
Sbjct: 376 TGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTL 435
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
+SG+ L +F +++ EG N T +L C L G +VH V GF
Sbjct: 436 LSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGF 495
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ + L+ MY + G A+ +FD + ER++ +W ++S A E+A++ FR
Sbjct: 496 QGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRS 555
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH---YGCMVDLLG 364
+ +E PND T LS C + G Q+ Y I+ +VD+
Sbjct: 556 MLRENKRPNDATLATSLSVCSDLACLGSGLQLHS-----YTIKSGWNSSVVSSALVDMYV 610
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+CG + +AE L D+V W ++ HG+ A +E+I
Sbjct: 611 KCGNLADAEMLFDESD-THDLVEWNTIICGYAQHGHGYKALEAFQEMI 657
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 177/393 (45%), Gaps = 16/393 (4%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
+++ + K +HA+++ S D F LL +C G L+ A +F+ + + W
Sbjct: 74 RALRRGKALHARLLRSGPRPDAFLHDSLLNMYC---KCGRLADARSVFDGMPHRDVVAWT 130
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
++ A ++ + A+ L+ M G PN LKAC+ L Q+H K
Sbjct: 131 AMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKL 190
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
D +V + LV Y +++ A + + R+ W +++ YA+ + +++F
Sbjct: 191 EGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVF 250
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
D+++ G E + TL +VL C + G + G+ VH V RG E +L L+ MY+K
Sbjct: 251 DKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKC 310
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
+ A +F + E ++ + MIS H A EA D+F ++ + PN TFVG+
Sbjct: 311 LSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLA 370
Query: 325 SACCHAGFIDVGRQIFGSM-----KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
G +++ R I + R G+ I V + + G V +A L +
Sbjct: 371 IVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAI------VGMYVKTGAVQDA-ILAFDL 423
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ PD+ W LL+ + N E R+ KE+I
Sbjct: 424 MQGPDIASWNTLLSGFYSGNNCEHGLRIFKELI 456
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 166/361 (45%), Gaps = 4/361 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+HAQ + + D + +S L+ A S G++ A R + WN L+ A
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVE--AYVSCGEVDVAERALLDSPVRSDVSWNALLNEYAR 239
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+ K + ++ + +G +++T VLK C + + +H V K GL+ D +
Sbjct: 240 DGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVL 299
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
NCL+ YS +A +VF I + + MIS + + A EA +F QM G
Sbjct: 300 NNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGV 359
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+PN T + +++G + L +H + GF + A+V MY K GA+ A
Sbjct: 360 KPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAIL 419
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
FD M +IA+WN ++SG S + E L +F++L E ++ N T+VG+L C
Sbjct: 420 AFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMD 479
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G Q+ + + G + + ++D+ + G A + R+ + DV W ++
Sbjct: 480 LRFGCQVHACVLKS-GFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKER-DVFSWTVVM 537
Query: 393 A 393
+
Sbjct: 538 S 538
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 13/324 (4%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
A ++ L+ C+ R+L K +H + +SG D + + L+ Y L +AR
Sbjct: 57 AEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARS 116
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFD + +R + WT M+S + A AL LF +M EG PN LA+ L AC
Sbjct: 117 VFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSD 176
Query: 232 LELGEKVHV-FVKMRGFEMGAILGTALVHMYTKNGALAKA-KALFDSMPERNIATWNAMI 289
L +VH VK+ G + ++LV Y G + A +AL DS P R+ +WNA++
Sbjct: 177 LGFTPQVHAQAVKLEGL-FDPYVSSSLVEAYVSCGEVDVAERALLDS-PVRSDVSWNALL 234
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYG 348
+ A G + + +F KL + + T VL C G G+ + G +KR G
Sbjct: 235 NEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKR--G 292
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
+E C++++ +C +A E+ R + +PDVV +++ H A +
Sbjct: 293 LETDRVLNNCLIEMYSKCLSAEDAYEVFAR-IDEPDVVHCSLMISCFDRHDMAPEAFDIF 351
Query: 409 KEI--IALEPNNH---GVYVVLSN 427
++ + ++PN + G+ +V S
Sbjct: 352 MQMSDMGVKPNQYTFVGLAIVASR 375
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 258/463 (55%), Gaps = 43/463 (9%)
Query: 13 LPIPPLS-----LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
LP PP S + +C ++ LKQ+H + ++++R +LL F +L S L Y
Sbjct: 2 LPAPPFSHGDFVAVLSRCATLAHLKQLHGRSVVTARAASQSTTFQLLRFASLRLSC-LPY 60
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNP----DKAIFLYMNMRRTGF-APNQHTFTFVL 122
A RLF+S PN F+++ ++ A A++ A+ L++ M R G APNQ + VL
Sbjct: 61 ARRLFDSTPHPNVFLYSAMLSAYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYPLVL 120
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+A + + + IH+H KSG + L+ YS + +AR++FD + R +
Sbjct: 121 RAACAI-GVQLVRSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLDARKLFDGLTERNVI 179
Query: 183 VWTTMISGYAQSFRANEALMLFDQM-------------------------------LMEG 211
WT ++SGYA++ + +A++LFD+M + EG
Sbjct: 180 SWTALVSGYARAGKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRMVDEG 239
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+ N T++ VLSAC G L++G+ VH + G+ + L+ MY K G L +A+
Sbjct: 240 FQLNGTTVSCVLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEAR 299
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD +R++ TWN++I+ LA HGH++ A+ +F ++ E I P+ +TFVG+L+AC H G
Sbjct: 300 WMFDEFSDRSLTTWNSLINCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHGG 359
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
F+D G F M IEP+IEHYGC+VDLLGR G+ +A +I M +PD V+WG+L
Sbjct: 360 FVDEGLTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSL 419
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
L AC+ H +E+AE V++++ L PNN V+L+N+Y+E S
Sbjct: 420 LNACRTHRQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGGS 462
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 249/442 (56%), Gaps = 42/442 (9%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFC-ALSSSGDLSYATRLFNSIQSPNHFMWN 84
K+ QL QIHA ++ Q + S ++ C AL G YA +F+ Q+PN ++N
Sbjct: 20 KTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMG---YANLVFHQTQNPNLLLFN 76
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS-------------- 130
++I+ + + ++ L+ M+ G P++ TF +LK+CS +
Sbjct: 77 SMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVV 136
Query: 131 ---------------LNCCKQIH--THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
C ++ V LD D+ V N ++R + D+ ++F
Sbjct: 137 GFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGDIEMGFRLF 196
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
++R+R++ W +MI+G QS R EAL LF +M GFEP+ T+ ++L CA+ G ++
Sbjct: 197 RQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVD 256
Query: 234 LGEKVHVFVK----MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
+GE +H + + +R F +G +LV Y K G L A +F+ MP++N+ +WNAMI
Sbjct: 257 VGEWIHSYAESSRLLRDF---ISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMI 313
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
SGL +G E DLF ++ + + PND TFVGVLS C HAG ++ GR +F SM + +
Sbjct: 314 SGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKM 373
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
EPK+EH+GCMVDLL R G + EA +L++ M +P+ V+WG+LL+A + G+++ AE VK
Sbjct: 374 EPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVK 433
Query: 410 EIIALEPNNHGVYVVLSNMYAE 431
E+I LEP N G YV+LSN+YAE
Sbjct: 434 ELIELEPWNSGNYVLLSNVYAE 455
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/404 (39%), Positives = 239/404 (59%), Gaps = 5/404 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP-NHFMWNTLIRAQ 90
+Q+HA++++S D A+RL+ A S G +S A R+F+ + + N F+WN LIRA
Sbjct: 88 RQLHARLLVSGTGLDAVLATRLVDLYA--SCGHVSLARRVFDEMPNQGNVFLWNVLIRAY 145
Query: 91 ASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
A + AI LY M G P+ T+ VLKAC+ + L+ +++H V ++ D
Sbjct: 146 ARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATD 205
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+ V L+ Y+ ++ A VF++ R VW +MI+ Q+ R EAL L M
Sbjct: 206 VFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAA 265
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EG P TL S +SA A + L G ++H + RGF L T+L+ MY K+G +
Sbjct: 266 EGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMV 325
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACC 328
A LF+ + R + +WNAMI G HGHA+ A +LF ++ E Q++P+ ITFVGVLSAC
Sbjct: 326 AHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACN 385
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G + +++F M VY I+P ++HY C+VD+LG G+ EA ++IK M+ KPD +W
Sbjct: 386 HGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIW 445
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
GALL CK H N+E+AE ++++I LEP + G YV+LSN+YAE+
Sbjct: 446 GALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAES 489
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 150/294 (51%), Gaps = 6/294 (2%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
N + +L++C R++ +Q+H + SG LD + LV Y+ ++ AR+VF
Sbjct: 67 NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126
Query: 174 DEIRNR-TLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGC 231
DE+ N+ + +W +I YA+ A+ L+ ML G +P++ T VL ACA
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L G +VH V + + T L+ MY K G + +A A+F+ R+ A WN+MI+
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIE 350
+G EAL L R + E I P T V +SA A + GR++ G +R +G +
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
K++ ++D+ + G V+ A L ++++ + +++ W A++ HG+ + A
Sbjct: 307 DKLK--TSLLDMYAKSGWVMVAHVLFEQLLHR-ELISWNAMICGFGMHGHADHA 357
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 233/411 (56%), Gaps = 34/411 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S+G L + R F+ + N WN++I A + N +A L+ MRR G ++ T
Sbjct: 156 ASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLV 215
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL------------- 166
+L ACS +L K +H+H+ G +DL + N LV Y DL
Sbjct: 216 SLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFK 275
Query: 167 ------------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ AR F++I +++ W MIS Y Q R +EAL L+++M
Sbjct: 276 NAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMK 335
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+ G P+ TLA+VLSAC Q G L G+ +H ++ G L +L+ MY + G +
Sbjct: 336 LLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVD 395
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A +LF MP +N+ +WNA+I LA HG A++AL FR + + P++ITFV +LSAC
Sbjct: 396 TAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACN 455
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G ++ G+ F +M+ VY ++P +EHY CMVDLLGR G++ +A +LIK M +PDVV+W
Sbjct: 456 HGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVW 515
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA---ESMK 436
GALL AC+ HG+I++ ++V+K+++ LE + G++V++SNM E E MK
Sbjct: 516 GALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMK 566
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 221/424 (52%), Gaps = 35/424 (8%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +C S+H+L Q+HA +++ D + L ++CAL + G + YA +LF+ I P+
Sbjct: 18 LLRRCGSVHRLNQLHAHLVVHG--VDDVTSQILASYCALPAGGGVWYARQLFDRIPDPDR 75
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F++N+LIRA +S P +A+ L M R G PN+ T F+LKAC+ V++ H
Sbjct: 76 FVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGV 135
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
V K G + V N L+ Y+ + L ++R+ FDE+ +R + W +MI+GYAQ+ EA
Sbjct: 136 VVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREA 195
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
LF+ M +G + TL S+L AC+ G LE G+ VH + +RG + IL ALV M
Sbjct: 196 CSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDM 255
Query: 261 YTKNG-------------------------ALAK------AKALFDSMPERNIATWNAMI 289
Y K G ALAK A+ F+ +PE++I +WNAMI
Sbjct: 256 YGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMI 315
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
S G EALDL+ +++ + P++ T VLSAC G + G+ I ++ +
Sbjct: 316 SCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH- 374
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
P + + ++D+ RCG+V A L M K +V+ W A++ A HG + A +
Sbjct: 375 NPGVALFNSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQDALMFFR 433
Query: 410 EIIA 413
+++
Sbjct: 434 SMVS 437
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 10/259 (3%)
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
CAL+ + A F I + WN +I +A+ LY M+ G AP++
Sbjct: 284 LCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDE 343
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
T VL AC + L K IH + + + + + N L+ Y+ ++ A +F E
Sbjct: 344 FTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSE 403
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ ++ + W +I A RA +ALM F M+ + F P+ +T ++LSAC G LE G
Sbjct: 404 MPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAG 463
Query: 236 EKV-----HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMI 289
+ HV+ G E A +V + + G LAKA L MP R ++ W A++
Sbjct: 464 QYYFQAMRHVYNVKPGVEHYA----CMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALL 519
Query: 290 SGLASHGHAEEALDLFRKL 308
HGH + + ++L
Sbjct: 520 GACRIHGHIQIGKQVIKQL 538
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 230/399 (57%), Gaps = 6/399 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H ++ + DH+ + L+ + GD S A ++F+ + + WN+LI
Sbjct: 125 RQVHGVVVKLGLLADHYVQNSLIR--CYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFM 182
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + D+AI ++ R P+ T VL AC+ L K IH + + ++L
Sbjct: 183 KAGHFDEAISVFF---RMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERR-FKVNLV 238
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ N ++ Y + A+ +FDE+ R + WT MI+G QS ++L LF M G
Sbjct: 239 LGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLG 298
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+++ L SVLSACA G L+ G VH ++ RG + +GTA+V MY K G + A
Sbjct: 299 ISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMAL 358
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F SM +RN TWNA++ GLA HG EAL+LF + + PN+ITF+ +L+ACCH G
Sbjct: 359 KIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCG 418
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D GR+ F +M ++Y + PK+EHYGCM+DL R G + EA EL + M KPDV++WG L
Sbjct: 419 LVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLL 478
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L AC GNIE++ R+ I+ L+ ++ GV+V+LSN+ A
Sbjct: 479 LNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISA 517
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 215/406 (52%), Gaps = 12/406 (2%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA-LSSSGDLSYATRLFNSIQSP-NHFM 82
CK++ +QIHAQ++ S + D F S+++ F A GD YA + F
Sbjct: 15 CKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGD--YACDYLEQGNTRLGSFP 72
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
+N+LI P A+ +Y M R GF P+ TF +LKACSN +Q+H V
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K GL D +V N L+RCY D + A +VFDE+ R + W ++ISG+ ++ +EA+
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
+F +M EP+ TL SVL+ACA++G L G+ +H ++ R F++ +LG A++ MY
Sbjct: 193 VFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERR-FKVNLVLGNAMLDMYV 248
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
KNG +AK +FD +P R+I +W MI+GL H +++L+LF + I P+ I
Sbjct: 249 KNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTS 308
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSAC G +D G + + + GI+ I +VD+ +CG + A ++ M +
Sbjct: 309 VLSACASLGTLDFGTWVHEYINQ-RGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMS-Q 366
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
+ W ALL HG + A + + +I ++PN +L+
Sbjct: 367 RNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILT 412
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 133/275 (48%), Gaps = 11/275 (4%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
+K C N+R +QIH + SGL D V + ++ ++ + + + E N L
Sbjct: 12 IKDCKNLRIF---RQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRL 68
Query: 182 NV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ ++I+GY A+ ++ +M+ +GF P+ T +L AC+ G +VH
Sbjct: 69 GSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVH 128
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V G + +L+ Y G + A +FD M R++ +WN++ISG GH +
Sbjct: 129 GVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFD 188
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA+ +F +++ E P+ T V VL+AC G + G+ I G ++R + + + + M
Sbjct: 189 EAISVFFRMDVE---PSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGN--AM 243
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+D+ + G EA+ + + + D+V W ++
Sbjct: 244 LDMYVKNGCFYEAKNIFDELPTR-DIVSWTIMITG 277
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 208/358 (58%), Gaps = 31/358 (8%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M G PNQ T + V+KAC+++ SL KQ H ++ K G + D+ V LV Y+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 166 LNNARQVFDEIRNRTLNVWTTMISG-------------------------------YAQS 194
L +A VFD++ R+ W MI+G YAQ+
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+E+L +F+QM G + + + SVLSACA LELG + H +V GF + ++G
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+ALV MY K+G++ A +FD MP+RN +WN++I+G A HG +A+ LF ++ + I
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN+I+FVGVLSAC H G ++ GR F M + YGI P + HY CM+DLLGR G + EAE
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
I M +PDV +WGALL AC+ HGN E+A+R+ + ++ +E G+YV+LSN+YA A
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAA 358
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 129/240 (53%), Gaps = 2/240 (0%)
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
D+ A +LF + + W +I A + D+++ ++ MR+TG ++ VL
Sbjct: 91 DMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLS 150
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
AC+++ +L +Q H +V +SG LD+ V + LV Y+ S + +A QVFD++ R
Sbjct: 151 ACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVS 210
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK-VHVFV 242
W ++I+G AQ R N+A++LF+QML G +PN ++ VLSAC+ +G + G ++
Sbjct: 211 WNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMT 270
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEA 301
+ G T ++ + + G L +A+ + MP E +++ W A++ HG+ E A
Sbjct: 271 QNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELA 330
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 52/301 (17%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q HA ++ S D S L+ A SG + A ++F+ + N WN++I A
Sbjct: 162 RQFHAYVVQSGFALDIVVGSALVDMYA--KSGSMEDACQVFDKMPQRNEVSWNSIITGCA 219
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ L+ M + G PN+ +F VL ACS HT + G
Sbjct: 220 QHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACS-----------HTGLVNEGRGY--- 265
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N + + Y + D+++ +T MI ++ +EA + M +
Sbjct: 266 -FNLMTQNYGIVPDVSH---------------YTCMIDLLGRAGCLDEAENFINGMPV-- 307
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ ++L AC G EL +++ + ++ I L ++Y G A
Sbjct: 308 -EPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIY-VLLSNIYAAAGQWDDAA 365
Query: 272 ALFDSMPERNIA-----TW-------NAMISGLASHGHAEEALD----LFRKLEKEQIVP 315
+ M +R + +W +A ++G SH +E + L RK++ VP
Sbjct: 366 KVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVP 425
Query: 316 N 316
N
Sbjct: 426 N 426
>gi|108709982|gb|ABF97777.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 523
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 236/450 (52%), Gaps = 35/450 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L+LL +C SM L+Q+HA ++ S +D AASR +AFCA D +YA RL
Sbjct: 36 PALTLLHTQCASMAHLRQLHAALVKSGLARDPIAASRAVAFCA-GDGRDAAYAARLVRHH 94
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
PN FMWNT IRA A P A+ L+++M + P + TF + A + +
Sbjct: 95 PRPNAFMWNTAIRALADGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAYARLGRAGDGA 154
Query: 136 QIHTHVSKSGLDLDLHVVNC-----------------LVRCYSV--------------SS 164
+H V K GL D +V N L RC + +
Sbjct: 155 GLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALARAG 214
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ AR VFD + RT+ W+ M+S Y++ R ++A+ LF M EG EPN+ L SVL
Sbjct: 215 RVDEARAVFDGMPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLG 274
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER---N 281
CA G LE G VH ++ M A++ TALV MY K G + KA+ +FD+ R
Sbjct: 275 CCASLGALEQGAWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAK 334
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+++WN+M+ G A HG EA LF +L + P+++TF+ +L A H+G D + +
Sbjct: 335 LSSWNSMMLGHAVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLA 394
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM +G+ P +EHYGC+VD L R G++ EAE I M PD +WGALL+ C+ HG+
Sbjct: 395 SMASEHGVVPGVEHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGALLSGCRLHGDA 454
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
E A R +E + +P + G YV+ ++ A
Sbjct: 455 EAAARAAREAVRCDPRDSGAYVLAASALAR 484
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 253/419 (60%), Gaps = 10/419 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASR--LLAFCALSSSGDLSYATRLFNSI 75
+LL KC S Q+KQ+ A +II+ HF++SR LL CA+SS GDLSYA +F I
Sbjct: 4 FNLLLQKCSSFSQIKQLQANLIINGDF--HFSSSRTKLLELCAISSFGDLSYALHIFRYI 61
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNC 133
P+ WN +IR A S +P A+F Y M + + T +F LKAC+ + +
Sbjct: 62 PYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSE 121
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
Q+H+ + + G + D+ + L+ Y+ DL+ A+++FDE+ + W +I+G+AQ
Sbjct: 122 AIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQ 181
Query: 194 SFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
R +A+M F +M ++G PN+VT+ L AC+Q G L+ GE VH ++
Sbjct: 182 GSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQ 241
Query: 253 LGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+ ++ MY K G++ KA +F++M ++++ TWN MI A HG +ALDLF KL +
Sbjct: 242 VCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRS 301
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
+ P+ ++++ VL AC HAG ++ G ++F SM + G+EP I+HYG MVDLLGR G++ E
Sbjct: 302 GMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQ-RGLEPNIKHYGSMVDLLGRAGRLKE 360
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
A +++ + + P++V+W LL AC+ +G++E+AE ++++ + + G +V+LSN+YA
Sbjct: 361 AYDIVSSLPF-PNMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYA 418
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 246/452 (54%), Gaps = 33/452 (7%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
P L K + + +IH + D F + L+A A S + A LF
Sbjct: 122 FSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYA--SCRRIMDARLLF 179
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+ + P+ WN +I + + D A+ L+ +MR + P+ VL AC + +L+
Sbjct: 180 DKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLS 239
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYS---------------------VSSDL----- 166
+ IH V +G +D H+ L+ Y+ VS+ +
Sbjct: 240 YGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYA 299
Query: 167 -----NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLAS 221
+AR +FD++ R L W+ MISGYA+S + EAL LFD+ML + P+ +T+ S
Sbjct: 300 KLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLS 359
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
V+SAC+ G L +H +V GF + AL+ MY K G L KA+ +F++MP +N
Sbjct: 360 VISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKN 419
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+ +W++MI+ A HG+A+ A+ LFR++++ I PN +TF+GVL AC HAG ++ G ++F
Sbjct: 420 VISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFS 479
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM +GI P EHYGCMVDL R + +A ELI+ M + P+V++WG+L++AC+ HG
Sbjct: 480 SMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEA 539
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
E+ E K ++ LEP++ G VVLSN+YA+ +
Sbjct: 540 ELGEFAAKRLLELEPDHDGALVVLSNIYAKEK 571
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 219/428 (51%), Gaps = 44/428 (10%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATR------LFNSIQSPNHFMW 83
LKQIHAQ++ S+ ++ + LL+ ALS S ++ +F+ I +P+
Sbjct: 31 HLKQIHAQILHSNTTPEN--TNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFS 88
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N L+R + S P+K IFLY N+R FA ++ +F +LKA S V + N +IH S
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G D + L+ Y+ + +AR +FD++ + W +I GY Q+ ++AL
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF+ M +P+SV L +VLSAC +G L G +H FVK G+ + + L TAL++MY
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 263 KNGAL-------------------------------AKAKALFDSMPERNIATWNAMISG 291
GA+ A+ +FD M ER++ W+AMISG
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A +EAL LF ++ +++ VP+ IT + V+SAC H G + I + R G
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRS-GFGR 387
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ ++D+ +CG +++A E+ + M K +V+ W +++ A HGN + A ++ + +
Sbjct: 388 ALSVNNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGNADSAIKLFRRM 446
Query: 412 --IALEPN 417
+ +EPN
Sbjct: 447 KEVNIEPN 454
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 222/369 (60%), Gaps = 6/369 (1%)
Query: 67 YATRLFNSIQSPNHFMWNTLIRAQASSLNPDKA---IFLYMNMRRTGFA-PNQHTFTFVL 122
YA LF+ I P F +N+LIRA +S+ A + +Y M R G PN T F L
Sbjct: 76 YARNLFDQIPEPTAFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFTLAFAL 135
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD-EIRNRTL 181
KACS V +L +Q+H+ + GL+ +V L+ Y+ ++ AR VFD + ++ L
Sbjct: 136 KACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNL 195
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W+ MI GY++ NEAL LF +M P+ VT+ SV+SACA++G L+LG VH F
Sbjct: 196 AAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAF 255
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ +G + L TAL+ MY K G + +AK +FD+M ER+ W+AMI GLA HG E A
Sbjct: 256 IDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVA 315
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L LF ++ + ++ PN++TF+GVLSAC H+G ++ GR+ + +M+ + GI+P +E+YGCMVD
Sbjct: 316 LKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQEL-GIKPSMENYGCMVD 374
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
L R + EA + M P+ V+W LL A KN ++ + K+++ LEP N
Sbjct: 375 LFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPEN 434
Query: 422 YVVLSNMYA 430
YV+LSN+YA
Sbjct: 435 YVLLSNLYA 443
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 241/445 (54%), Gaps = 35/445 (7%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFC-ALSSSGDLSYATRLFNSIQSPNHF 81
++C S++Q K++HAQ+ I + Q + ++LL AL SY LF+ + +PN F
Sbjct: 16 ERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPF 75
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH- 140
W LIRA A +A+ Y +MR+ +P TF+ + AC+ VR Q+H
Sbjct: 76 AWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQT 135
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT-------------------- 180
+ G DL+V N ++ Y L AR VFDE+ R
Sbjct: 136 LLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAA 195
Query: 181 -----------LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
+ WT M++GYAQ+ +AL +F ++ EG E + VTL V+SACAQ
Sbjct: 196 RDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQL 255
Query: 230 GCLELGEKVHVFVKMRGFEMG--AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
G + + + GF +G ++G+AL+ MY+K G + +A +F M ERN+ ++++
Sbjct: 256 GASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSS 315
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
MI G A HG A A+ LF + + + PN +TFVGVL+AC HAG +D G+Q+F SM++ Y
Sbjct: 316 MIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCY 375
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
G+ P E Y CM DLL R G + +A +L++ M + D +WGALL A HGN +VAE
Sbjct: 376 GVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIA 435
Query: 408 VKEIIALEPNNHGVYVVLSNMYAEA 432
K + LEP+N G Y++LSN YA A
Sbjct: 436 SKRLFELEPDNIGNYLLLSNTYASA 460
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 46/338 (13%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL---NNARQVFDEIR 177
+L+ CS SLN K++H + L +V+ L+R + + + R +F ++
Sbjct: 14 ILERCS---SLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLH 70
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
WT +I YA ++AL + M P S T +++ SACA LG +
Sbjct: 71 TPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQ 130
Query: 238 VHV-FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI-------------- 282
+H + + GF + A++ MY K G+L A+ +FD MPER++
Sbjct: 131 LHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIG 190
Query: 283 -----------------ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
TW AM++G A + +AL++FR+L E + +++T VGV+S
Sbjct: 191 DMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVIS 250
Query: 326 ACCHAG---FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
AC G + + R I S +G+ + ++D+ +CG V EA ++ K M +
Sbjct: 251 ACAQLGASKYANWIRDIAESSG--FGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMR-E 307
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
+V + +++ HG A ++ +++ ++PN+
Sbjct: 308 RNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNH 345
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 238/427 (55%), Gaps = 12/427 (2%)
Query: 12 PLPIPPLSLLADKCKSMHQL---KQIHAQMIIS---SRIQDHFAASRLLAFCALSSSGDL 65
P I +++L+ C S+ L KQIHAQ++ S S ++ A +++ C G +
Sbjct: 244 PSRITYMNVLS-ACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC-----GAV 297
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A +F + + + WNT+I S ++A ++ M + AP++ T+ +L AC
Sbjct: 298 KDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSAC 357
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ L C K+IH K GL D+ N L+ YS + + +ARQVFD + R + WT
Sbjct: 358 ARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWT 417
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
++ GYA + E+ F +ML +G E N +T VL AC+ L+ G+++H V
Sbjct: 418 ALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA 477
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G + AL+ MY K G++ A + + M R++ TWN +I GLA +G EAL F
Sbjct: 478 GIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKF 537
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
++ E++ PN TFV V+SAC ++ GR+ F SM++ YGI P +HY CMVD+L R
Sbjct: 538 EVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILAR 597
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G + EAE++I M +KP MWGALLAAC+ HGN+E+ E+ ++ + LEP N G YV L
Sbjct: 598 AGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSL 657
Query: 426 SNMYAEA 432
S +YA A
Sbjct: 658 SFIYAAA 664
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 195/378 (51%), Gaps = 4/378 (1%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
K K + KQ+H ++ + + + LL G ++ A RLF+ + + W
Sbjct: 56 KAKDLAVGKQVHEHILRFGMKPNVYIINTLLKL--YVHCGSVNEARRLFDKFSNKSVVSW 113
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N +I A +A L+ M++ G P++ TF +L ACS+ +LN +++H V +
Sbjct: 114 NVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVME 173
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+GL + V N L+ Y+ + +AR+VFD + +R WTT+ YA+S A E+L
Sbjct: 174 AGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKT 233
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
+ ML EG P+ +T +VLSAC LE G+++H + + TAL MY K
Sbjct: 234 YHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIK 293
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
GA+ A+ +F+ +P R++ WN MI GL G EEA +F ++ KE + P+ +T++ +
Sbjct: 294 CGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAI 353
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC G + G++I + G+ + ++++ + G + +A ++ RM K
Sbjct: 354 LSACARPGGLACGKEIHARAVK-DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KR 411
Query: 384 DVVMWGALLAACKNHGNI 401
DVV W AL+ + G +
Sbjct: 412 DVVSWTALVGGYADCGQV 429
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 168/318 (52%), Gaps = 18/318 (5%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
+ + G + + + +L++C + L KQ+H H+ + G+ +++++N L++ Y
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+N AR++FD+ N+++ W MISGYA EA LF M EG EP+ T S+LSA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C+ L G +VHV V G A +G AL+ MY K G++ A+ +FD+M R+ +W
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
+ A G+A+E+L + + +E + P+ IT++ VLSAC ++ G+QI +
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQI-- 272
Query: 346 VYGIEPKIEHYG------CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+E EH+ + + +CG V +A E+ + + DV+ W ++ + G
Sbjct: 273 ---VES--EHHSDVRVSTALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMIGGLVDSG 326
Query: 400 NIEVA----ERVVKEIIA 413
+E A R++KE +A
Sbjct: 327 QLEEAHGMFHRMLKECVA 344
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 261/462 (56%), Gaps = 41/462 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL DKCKSM +LK++HA I ++ ++L+F ALS+SGD+ Y+ R+F+ I S
Sbjct: 18 LSLL-DKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFSQISS 76
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P F WN +IR ++S NP ++ +++ M R G AP+ T+ F++KA + + +
Sbjct: 77 PTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKSGVSV 136
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ---- 193
H + K+G + D + N L+ Y+ ++ A +VF+ ++ + L W +M+ GYA+
Sbjct: 137 HAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEM 196
Query: 194 -------------------SF--------RANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
SF EA+ +F++M G + N VT+ SVLSAC
Sbjct: 197 AMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSAC 256
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD--SMPERNIAT 284
A G L+ G +H ++ M +L T+LV MY K GA+ +A +F S + ++
Sbjct: 257 AHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFI 316
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNAMI GLA+HG EE+L LF++++ I ++IT++ +L+AC H G + F S+
Sbjct: 317 WNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLV 376
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ G+ P EHY CMVD+L R G++ A + I ++ +P M GA+ + C NH N ++A
Sbjct: 377 K-RGMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHRNFDLA 435
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
E V +++I L+PNN G Y+ LSN+YA +++SM+ +E
Sbjct: 436 ETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAME 477
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 239/421 (56%), Gaps = 4/421 (0%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
PPL K + + Q HA ++ D F + L++ S+ G + +R+F+
Sbjct: 107 FPPLLKAVFKLRDANPF-QFHAHILKFGFDSDLFVRNSLIS--GYSNCGLFEFGSRVFDG 163
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ + W +I + + +A+ ++ M+R+G A N+ T VLKA +
Sbjct: 164 TEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFG 223
Query: 135 KQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ IH ++G + D+ + + LV Y ++A++VFDE+ +R + WT +I+GY Q
Sbjct: 224 RSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ + +F++ML PN TL+SVLSACA G L G +VH +V E+ +
Sbjct: 284 GRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTV 343
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT L+ Y K G L +A +F+ + E+N+ TW AMI+G A+HG+A A+DLF + +
Sbjct: 344 GTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHV 403
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN++TF+ VLSAC H G ++ GR++F SMK + +EPK +HY CMVDL GR G + EA+
Sbjct: 404 SPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAK 463
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
LI+RM +P +WGAL +C H + E+ + +I L+P++ G Y +L+N+Y+E++
Sbjct: 464 ALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQ 523
Query: 434 S 434
+
Sbjct: 524 N 524
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 204/408 (50%), Gaps = 24/408 (5%)
Query: 32 KQIHAQMIISSRI----QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
KQIH ++++S I +D F SRLL C +++ YA RL IQ+P+ +W++L+
Sbjct: 19 KQIHC-LVLTSPIFYTRRDLFL-SRLLRRC--TAATQFRYARRLLCQIQTPSIQLWDSLV 74
Query: 88 R--AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+ +LN + Y MRR G P++HTF +LKA +R N Q H H+ K G
Sbjct: 75 GHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPF-QFHAHILKFG 133
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D DL V N L+ YS +VFD ++ + WT MI G+ ++ + EA+ F
Sbjct: 134 FDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFV 193
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG-FEMGAILGTALVHMYTKN 264
+M G N +T+ SVL A ++ + G +H F G +G++LV MY K
Sbjct: 194 EMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKC 253
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G A+ +FD MP RN+ TW A+I+G E+ + +F ++ K + PN+ T VL
Sbjct: 254 GCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVL 313
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY----GCMVDLLGRCGKVLEAEELIKRMV 380
SAC H G + GR++ Y I+ IE ++D +CG + EA + +R+
Sbjct: 314 SACAHVGALHRGRRV-----HCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLR 368
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
K +V W A++ HG A + +++ + PN VVLS
Sbjct: 369 EK-NVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLS 415
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 224/370 (60%), Gaps = 5/370 (1%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L+ A +LF+ + N W T+I A + KA+ L + M R G PN +T++ VL+A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+ + + + +H + K GL+ D++V + L+ ++ + +A VFDE+ VW
Sbjct: 124 CNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
++I G+AQ+ R++ AL LF +M GF TL SVL AC LELG + HV +
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV- 239
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
++ IL ALV MY K G+L A+ +F+ M ER++ TW+ MISGLA +G+++EAL L
Sbjct: 240 -KYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 298
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F ++ PN IT VGVL AC HAG ++ G F SMK++YGI P EHYGCM+DLLG
Sbjct: 299 FELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLG 358
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+ GK+ +A +L+ M +PD V W LL AC+ N+ +AE K++IAL+P + G Y V
Sbjct: 359 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTV 418
Query: 425 LSNMYAEAES 434
LSN+YA ++
Sbjct: 419 LSNIYANSQK 428
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 133/268 (49%), Gaps = 8/268 (2%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMW 83
C M ++ +H +I D + S L+ F L D A +F+ + + + +W
Sbjct: 124 CNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPED---ALSVFDEMVTGDAIVW 180
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N++I A + D A+ L+ M+R GF Q T T VL+AC+ + L Q H H+ K
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 240
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
D DL + N LV Y L +AR+VF++++ R + W+TMISG AQ+ + EAL L
Sbjct: 241 --YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 298
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKMRGFEMGAILGTALVHMYT 262
F+ M G +PN +T+ VL AC+ +G LE G K+ G G ++ +
Sbjct: 299 FELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLG 358
Query: 263 KNGALAKAKALFDSMP-ERNIATWNAMI 289
K G L A L + M E + TW ++
Sbjct: 359 KAGKLDDAVKLLNEMECEPDAVTWRTLL 386
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 149/295 (50%), Gaps = 7/295 (2%)
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
+++ G + T++ ++K C + R+++ I H+ +G + +VN L+ Y +
Sbjct: 3 SLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFN 62
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
LN+A Q+FD++ R + WTTMIS Y++ +AL L ML +G PN T +SVL
Sbjct: 63 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR 122
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC + + +H + G E + +AL+ ++ K G A ++FD M +
Sbjct: 123 ACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 179
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN++I G A + ++ AL+LF+++++ + T VL AC +++G Q +
Sbjct: 180 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ---AHV 236
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ + + +VD+ +CG + +A + +M + DV+ W +++ +G
Sbjct: 237 HIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMK-ERDVITWSTMISGLAQNG 290
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
D + G +S T + ++ C + G + + G + L L++MY K
Sbjct: 1 MDSLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVK 60
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
L A LFD MP+RN+ +W MIS + ++AL+L + ++ + PN T+ V
Sbjct: 61 FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSV 120
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC G DV G +K G+E + ++D+ + G+ +A + MV
Sbjct: 121 LRAC--NGMSDVRMLHCGIIKE--GLESDVYVRSALIDVFAKLGEPEDALSVFDEMV-TG 175
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEI 411
D ++W +++ + +VA + K +
Sbjct: 176 DAIVWNSIIGGFAQNSRSDVALELFKRM 203
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 217/372 (58%), Gaps = 2/372 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GD+SYA +LF+ + P F+WNT+++ + PDKA+ +Y MR G P+ TF FV+
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC+ + L +H HV K GL+ V L+ Y +L A +F + R L
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +I+ Q+ +++AL F +M M G +P+SVT+ S LSAC GCLE GE+++ F
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ G + I+ A + M K G + KA LFD MP+RN+ +W+ +I G A +G +E+AL
Sbjct: 263 REEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKAL 322
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV--YGIEPKIEHYGCMV 360
LF +++ + + PN +TF+ VLSAC H G ++ G Q F M + I+P+ EHY CMV
Sbjct: 323 ALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMV 382
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
DLLGR G + EA IK M + D +WGALL AC H NI++ + V + L P
Sbjct: 383 DLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIAS 442
Query: 421 VYVVLSNMYAEA 432
+V+LSNMYA A
Sbjct: 443 YHVLLSNMYAAA 454
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 237/423 (56%), Gaps = 41/423 (9%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A++ + D+ YA + + + P ++ WN +IR ++S NP+K+I +Y+ M R G P+ T
Sbjct: 797 AVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMT 856
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR------------------- 158
+ F++K+ S + + +H V KSGL+ DL + N L+
Sbjct: 857 YPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMP 916
Query: 159 ------------CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
Y+ S D+ +AR VFDE+ R + W++MI GY + N+AL +FDQ
Sbjct: 917 HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 976
Query: 207 ML-MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
M+ M + N VT+ SV+ ACA G L G+ VH ++ + IL T+L+ MY K G
Sbjct: 977 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 1036
Query: 266 ALAKAKALF--DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
++ A ++F S+ E + WNA+I GLASHG E+L LF K+ + +I P++ITF+ +
Sbjct: 1037 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 1096
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L+AC H G + F S+K G EPK EHY CMVD+L R G V +A + I M KP
Sbjct: 1097 LAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKP 1155
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKM 437
M GALL C NHGN+E+AE V K++I L+P+N G YV L+N+YA A SM+
Sbjct: 1156 TGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMRE 1215
Query: 438 QLE 440
+E
Sbjct: 1216 AME 1218
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 168/405 (41%), Gaps = 68/405 (16%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
LS R++ ++P+ + +LI +S P +AIF + M+ PN+ TF +++
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-------- 176
+ + ++ D V LV + S ++N +F E+
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPV 788
Query: 177 ---RNRTLNV-----------------------WTTMISGYAQSFRANEALMLFDQMLME 210
RN L V W +I G++ S +++ ++ QML
Sbjct: 789 SVDRNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 848
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM---------- 260
G P+ +T ++ + ++ +LG +H V G E + L+HM
Sbjct: 849 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 908
Query: 261 ---------------------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
Y K+G + A+ +FD M ER++ TW++MI G G
Sbjct: 909 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 968
Query: 300 EALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
+AL++F ++ + N++T V V+ AC H G ++ G+ + + V+ + +
Sbjct: 969 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTS 1027
Query: 359 MVDLLGRCGKVLEAEELIKRM-VWKPDVVMWGALLAACKNHGNIE 402
++D+ +CG + +A + R V + D +MW A++ +HG I
Sbjct: 1028 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 1072
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 12/276 (4%)
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-NQHTFTFVLKACSNVRSLNCCKQ 136
P+ F N + A + A+ L MR GF P +HT V K C N R+++ CK
Sbjct: 507 PSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKY 566
Query: 137 IHTHVSKSGLD---LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ + L ++ L++ V L R + + + +I +
Sbjct: 567 LDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCK 626
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG--A 251
+ R EA +LF++M+ +G +P T S++ + G E+ + V+M E
Sbjct: 627 ACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG--EIDRGLSCIVRMYEDEKNPDV 684
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPER----NIATWNAMISGLASHGHAEEALDLFRK 307
I T+L+H +G ++A ++ M + N T+ A+I GL G + EAL FR+
Sbjct: 685 ITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFRE 744
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+E++++ P+ ++ ++S+ + I+ G IF M
Sbjct: 745 MEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREM 780
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 100/497 (20%), Positives = 196/497 (39%), Gaps = 64/497 (12%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L + + KS L + +++ + +H + +++FC G + A L +
Sbjct: 219 PVLQVYCNTGKSERAL-SVFNEILSRGWLDEHISTILVVSFCKW---GQVDKAFELIEML 274
Query: 76 QSP----NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
+ N+ + LI DKA L+ MRR G + + ++ + L
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF--DEIRNRTLNVWTTMIS 189
++ + +SG+ D ++ L+ +S S+L+ +V D + + ++ ++
Sbjct: 335 EMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFE 394
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
G+ ++ +EA F Q LM +E + V+ L L + + + +
Sbjct: 395 GFIRNDLVHEAYS-FIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKAN 453
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ L+H +NG + +N +I G+ G +EE+L L +++
Sbjct: 454 KVDMAVTLLHDIVQNGLIPGP------------MMYNNIIEGMCKEGRSEESLKLLGEMK 501
Query: 310 KEQIVPNDITF---VGVLSACCH-AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
+ P+ T G L+ C G +D+ +++ R YG EP I+H +V L
Sbjct: 502 DAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM-----RFYGFEPWIKHTTFLVKKLCE 556
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G+ ++A + + DV G L G++ + + +I E + G+
Sbjct: 557 NGRAVDACKYLD------DVAGEGFL-------GHMVASTAAIDGLIKNEGVDRGL---- 599
Query: 426 SNMYAEAESMKMQLEILLVQVLFAGLASA-----ADILQNPDFESPPTNLTPNRSTPFVL 480
++ + + +++ VL L A ADIL N E L P +T
Sbjct: 600 -ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFN---EMVSKGLKPTVATY--- 652
Query: 481 LNGNNTIPGWTFEGTVQ 497
N+ I GW EG +
Sbjct: 653 ---NSMIDGWCKEGEID 666
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 15/264 (5%)
Query: 101 FLYMNM--RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR 158
+L+ N ++ G+ + + + + S R K + V S + +R
Sbjct: 90 YLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIR 149
Query: 159 CYSVSSDLNNARQVFDEIRNRTL---NVWTTMISGYAQSFRANEALMLFDQMLME----G 211
C + ++ A VFD +R L N +T A S + ++ L + L E G
Sbjct: 150 CLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCG 209
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F + TL VL +G E V + RG+ + + T LV + K G + KA
Sbjct: 210 FHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAF 268
Query: 272 ALFDSMPERNI----ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
L + + ER+I T+ +I G ++A LF K+ + + + + ++
Sbjct: 269 ELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGL 328
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEP 351
C +++ ++ +KR GI P
Sbjct: 329 CKHKDLEMALSLYLEIKRS-GIPP 351
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 244/446 (54%), Gaps = 42/446 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFC---ALSSSGDLSYATRLFNSIQS 77
L C + + ++HA ++ + + A R +AF A ++SG L + L +
Sbjct: 295 LLTSCSTARRAAELHAAVLRTGLLD---ATDRAVAFRLQRAYAASGRLDLSLALLRRTRD 351
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P + + I A +S + A+ L +M G P HT + L AC R L+ + +
Sbjct: 352 PTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPAC---RGLSPGRAL 408
Query: 138 HTHVSKSGLDLDLHV--------------------------------VNCLVRCYSVSSD 165
H + K L D +V V ++ CY+
Sbjct: 409 HGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGA 468
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L++AR +FD + + W MI GY Q R NEAL LF +ML G EP+ VT+ VLSA
Sbjct: 469 LDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSA 528
Query: 226 CAQSGCLELGEKVHVFVK-MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AQ G +E G+ +H +VK R ++ +GTAL+ MY K G+L A +F + +++I
Sbjct: 529 VAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVV 588
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNAMI+G A HG + +AL++F + ++ + P DITF+G+L+AC H+G ++ GR+ F SM+
Sbjct: 589 WNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSME 648
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
R YGI+PKIEHYGCMVDLLGR G + EA L++ M PD VMW +LLAAC+ H N+ +
Sbjct: 649 REYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLG 708
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA 430
+++ ++A N G+Y++LSN+YA
Sbjct: 709 QQIADYLVAKGLANSGMYILLSNIYA 734
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 245/446 (54%), Gaps = 36/446 (8%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
LL KC +M+QLKQ HAQ++ S +F SRLL FCA S +G LS+A +LF IQ P
Sbjct: 10 LLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPT 69
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
++NT+I+A AI ++ + R G P+ +T +VLKA + + +++ + IH
Sbjct: 70 ICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHA 129
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--------------------- 178
K G ++ V N L+ Y ++ +ARQVFDE+
Sbjct: 130 CTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDT 189
Query: 179 ----------RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
+ +W MISGY Q+ E L +F M + EP+ + ++LSACA
Sbjct: 190 ARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAH 249
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G L+ G +H ++ G + + T L+ MY K G L AK LF+ M +R+ WNAM
Sbjct: 250 MGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAM 309
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
ISG+A G E A+ LF ++EK I P++ITF+ VL+AC ++G +D G +I+ M V+
Sbjct: 310 ISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHK 369
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRM--VWKP--DVVMWGALLAACKNHGNIEVA 404
IEPK EHYGC++DLL R G+ EAE +I+R+ P + V W A L+AC HG + A
Sbjct: 370 IEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQA 429
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA 430
E + + LE ++ G YV+LSNMYA
Sbjct: 430 EVAAERLFQLERHS-GAYVLLSNMYA 454
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/398 (38%), Positives = 228/398 (57%), Gaps = 2/398 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
+IH ++ D F + L+ C + G L A ++F+ I N W +I
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLV--CLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIG 190
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+AI ++ + AP+ T VL AC+ + LN + IH + + G+ ++ V
Sbjct: 191 VGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFV 250
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
LV Y+ ++ AR VFD + + + W MI GYA + EA+ LF QM E
Sbjct: 251 GTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENV 310
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ T+ VLSACA+ G LELGE V V F +LGTAL+ +Y K G++++A
Sbjct: 311 KPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWE 370
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F M E++ WNA+ISGLA +G+ + + LF ++EK I P+ TF+G+L C HAG
Sbjct: 371 VFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGL 430
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+D GR+ F SM R + + P IEHYGCMVDLLGR G + EA +LI+ M + + ++WGALL
Sbjct: 431 VDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
AC+ H + ++AE +K++I LEP N G YV+LSN+Y+
Sbjct: 491 GACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYS 528
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 202/349 (57%), Gaps = 5/349 (1%)
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
C+ S D +Y LF+ I+ PN F+WNT+IR S+ D AI Y MR GF PN
Sbjct: 55 CSFDFS-DTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNF 113
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
TF FVLKAC+ + L +IHT V K G D D+ V LV Y+ L +A +VFD+I
Sbjct: 114 TFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDI 173
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
++ + WT +ISGY + EA+ +F ++L P+S T+ VLSAC Q G L GE
Sbjct: 174 PDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGE 233
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H + G +GT+LV MY K G + KA+++FD MPE++I +W AMI G A +G
Sbjct: 234 WIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNG 293
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEH 355
+EA+DLF ++++E + P+ T VGVLSAC G +++G + G + R + P +
Sbjct: 294 LPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGT 353
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++DL +CG + A E+ K M K D V+W A+++ +G ++++
Sbjct: 354 --ALIDLYAKCGSMSRAWEVFKGMKEK-DRVVWNAIISGLAMNGYVKIS 399
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 228/406 (56%), Gaps = 2/406 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ + K++H ++ D F S L+A S SG+ +F + N W +
Sbjct: 143 ALREGKEVHCNIVKHGFDSDVFVQSSLVAM--YSQSGETLGMELVFGEMVVRNIVSWTAV 200
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I + + + ++ M +G PN T VL AC+ + LN K IH + K G+
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGV 260
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D D+ + N L+ Y ++ AR +FD + + L W MI+ Y Q+ A+ LF +
Sbjct: 261 DPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRR 320
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M E + + +T+ SV+SACA G L G +H VK +G E+ + AL+ MY K G
Sbjct: 321 MQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGN 380
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A+ +F+ +P R++ +W +MI ASHGH E+AL LF +++ E + PN TF V +A
Sbjct: 381 IDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTA 440
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H+G ++ GR+ F SM R Y I P +EH CMVDLLGR G ++EA E I +M +PDV
Sbjct: 441 CRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVS 500
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WGALL +C+ H N+E+AE V +++ L+P YV++SN+YAEA
Sbjct: 501 VWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEA 546
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 228/401 (56%), Gaps = 7/401 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPN 79
L + C S+ L +IHA ++ + Q+ +++L+ C L+ + D YA ++F+ + +
Sbjct: 35 LLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMD--YARKMFDQMPKRD 92
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F+WNTLIR A + ++A+ LY NM G P+ +TF FV+++C+ + +L K++H
Sbjct: 93 VFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHC 152
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
++ K G D D+ V + LV YS S + VF E+ R + WT +I+GY Q+ E
Sbjct: 153 NIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKE 212
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
L +F +M+ G +PN+VTL SVL ACA L LG+ +H + G + L AL+
Sbjct: 213 GLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIA 272
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
+Y K G + A++LFD M +N+ +WNAMI+ + A+ LFR+++ E++ + IT
Sbjct: 273 LYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYIT 332
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
V V+SAC G ++ GR + +KR G+E + ++D+ +CG + A E+ +R+
Sbjct: 333 MVSVISACASLGALNTGRWMHELVKR-KGLEINVSITNALIDMYAKCGNIDLAREVFERL 391
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
+ VV W +++ AC +HG+ E A ++ + ++PN+
Sbjct: 392 PCR-SVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNS 431
>gi|356528208|ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 444
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 243/418 (58%), Gaps = 8/418 (1%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS-PN 79
L + K++ QL Q+HA + +S F S+ F SS+ L +A F+S+ + P
Sbjct: 6 LIHRSKTLTQLLQLHALFLKTSLDHHPFFISQ---FLLQSSTISLPFAASFFHSLPTLPP 62
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F WNTLIRA A++ P ++ L+ ++ + P+ T+ FVLKAC+ SL +H+
Sbjct: 63 LFAWNTLIRAFAATPTPFHSLTLFRLLQTSPLNPDNFTYPFVLKACARSSSLPLGGTLHS 122
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
K+G HV N L+ Y+ + +AR VFDE+ +R + W+++I+ Y S +
Sbjct: 123 LTLKTGFRSHRHVGNALLNMYAECYAVMSARMVFDEMTDRDVVSWSSLIAAYVASNSPLD 182
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
A +F +M ME +PNSVTL S+LSAC ++ L +GE +H +V G EM LGTAL
Sbjct: 183 AFYVFREMGMENEQPNSVTLVSLLSACTKTLNLRVGESIHSYVTSNGIEMDVALGTALFE 242
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G + KA +F+SM ++N+ + MIS LA HG ++ + LF ++E + + ++
Sbjct: 243 MYAKCGEIDKALLVFNSMGDKNLQSCTIMISALADHGREKDVISLFTQMEDGGLRLDSLS 302
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F +LSAC H G +D G+ F M RVYGI+P +EHYGCMVDLLGR G + EA ++IK M
Sbjct: 303 FAVILSACSHMGLVDEGKMYFDRMVRVYGIKPSVEHYGCMVDLLGRAGFIQEAYDIIKGM 362
Query: 380 VWKPDVVMWGALLAACKNHGNI-EVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+P+ V+ + L AC+NHG + + + + E LE YV+ +N+++ S K
Sbjct: 363 PMEPNDVILRSFLGACRNHGWVPSLDDDFLSE---LESELGANYVLTANVFSTCASWK 417
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 229/411 (55%), Gaps = 48/411 (11%)
Query: 69 TRLFNSIQSPNHF--------MWNTLIRA----QASSLNPDKA-IFLYMNMRRTGFAPNQ 115
TRL +S HF +WNTLIRA +A P + I +++ MR G P+
Sbjct: 5 TRLISSTHPTLHFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDF 64
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
HTF F+L++ ++ L+ + +H + + GL +D V L+ YS +L ARQVFDE
Sbjct: 65 HTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDE 124
Query: 176 I------------------------RN-------RTLNVWTTMISGYAQSFRANEALMLF 204
I RN R + W+ MI+GY + + EAL LF
Sbjct: 125 IPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALF 184
Query: 205 DQMLMEGF---EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
+M M G PN T++ VL+AC + G LE G+ H ++ G + +LGTAL+ MY
Sbjct: 185 REMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMY 244
Query: 262 TKNGALAKAKALFDSM-PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
K G++ KA +F ++ P +++ W+AMISGLA HG AEE + LF K+ + + PN +TF
Sbjct: 245 AKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTF 304
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+ V AC H G + G+ M Y I P I+HYGCMVDL GR G++ EA ++K M
Sbjct: 305 LAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP 364
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+PDV++WGALL+ + HG+IE E +K++I LEP N G YV+LSN+YA+
Sbjct: 365 MEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAK 415
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 242/456 (53%), Gaps = 24/456 (5%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQL------KQIHAQMIISSRIQDHFAASRLLAFCAL 59
SSLR+ L IP S KS L + H Q + D F +S L+
Sbjct: 1131 SSLRKLGL-IPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDM--Y 1187
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR--------TGF 111
S G L A LF+ I N W ++I + D A+ L+ +
Sbjct: 1188 SKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNV 1247
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
+ VL ACS V + +H V K G D + V N L+ Y+ +++
Sbjct: 1248 PLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKK 1307
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSG 230
VFD + + W +MI+ YAQS + EAL +F M+ G N+VTL++VL ACA +G
Sbjct: 1308 VFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAG 1367
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
L G+ +H V E +GT+++ MY K G + AK FD M E+N+ +W AM++
Sbjct: 1368 ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVA 1427
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
G HG A+EALD+F K+ + + PN ITFV VL+AC HAG ++ G F +MK Y IE
Sbjct: 1428 GYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIE 1487
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P IEHYGCMVDL GR G + EA LIKRM KPD V+WG+LL AC+ H N+++ E ++
Sbjct: 1488 PGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQK 1547
Query: 411 IIALEPNNHGVYVVLSNMYAEA------ESMKMQLE 440
+ L+P+N G YV+LSN+YA+A E M+M ++
Sbjct: 1548 LFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 1583
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 208/384 (54%), Gaps = 33/384 (8%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
L CK+ L+QIHA++I S D +L+ S+ G ++YA LF IQ+P
Sbjct: 32 FLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHL--YSTHGRIAYAILLFYQIQNPC 89
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F WN +IRA + ++A+ LY NM G A ++ TF FV+KAC+N S++ K +H
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 140 HVSKSGLDLDLHVVNCLV-------------------RCYSVSS------------DLNN 168
+ K G D+ V N L+ R +V S DL
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
AR++FDEI ++ + WT MI+GY ++ + EAL LF +M E PN T+ S++ AC +
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G L LG +H + E+G LGTAL+ MY+K G++ A +F++MP +++ TWN+M
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
I+ L HG +EAL+LF ++E+ + P+ ITF+GVL AC H + G F M + YG
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYG 389
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEA 372
I P EHY CM +L R + EA
Sbjct: 390 IAPIPEHYECMTELYARSNNLDEA 413
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 188/365 (51%), Gaps = 21/365 (5%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
AT + + N WN++I A + +A+ + ++R+ G P + +F +K+CS
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ L + H G + DL V + L+ YS L +AR +FDEI R + WT+M
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEP--------NSVTLASVLSACAQSGCLELGEKVH 239
I+GY Q+ +A+ AL+LF L E E +SV + SVLSAC++ + E VH
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 1274
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
FV +GF+ +G L+ Y K G +K +FD M E++ +WN+MI+ A G +
Sbjct: 1275 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 1334
Query: 300 EALDLFRKLEKEQIVP-NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EAL++F + + V N +T VL AC HAG + G+ I + I+ +E+ C
Sbjct: 1335 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYNVC 1389
Query: 359 ----MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-- 412
++D+ +CG+V A++ RM K +V W A++A HG + A + +++
Sbjct: 1390 VGTSIIDMYCKCGRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 1448
Query: 413 ALEPN 417
++PN
Sbjct: 1449 GVKPN 1453
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 151/352 (42%), Gaps = 77/352 (21%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
F+L+ C N + L +QIH + +SGL D + L+ YS + A +F +I+N
Sbjct: 32 FLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W +I + + +ALML+ M+ +G + T V+ AC ++LG+ VH
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGA-------------------------------LA 268
+ GF + L+ Y K G L
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+A+ +FD +P +N+ +W AMI+G + EEAL+LF++++ E I PN+ T V ++ AC
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIE---HYG-CMVDLLGRCGKVLEAEELIKRM----- 379
G + +GR I Y I+ IE + G ++D+ +CG + +A E+ + M
Sbjct: 269 EMGILTLGRGIHD-----YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323
Query: 380 -VW----------------------------KPDVVMWGALLAACKNHGNIE 402
W KPD + + +L AC + N++
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVK 375
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 12/250 (4%)
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
R S+SS+L A + + ++ W ++I+ A+ + EAL F + G P
Sbjct: 1086 RPVSLSSNL--ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRS 1143
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
+ + +C+ L G H + GFE + +AL+ MY+K G L A+ALFD +
Sbjct: 1144 SFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI 1203
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI-------VPND-ITFVGVLSACCH 329
P RN+ +W +MI+G + A+ AL LF+ +E+ VP D + V VLSAC
Sbjct: 1204 PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 1263
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ + G + + G + I ++D +CG+ L ++++ M K D + W
Sbjct: 1264 VSGKGITEGVHGFVVK-KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDD-ISWN 1321
Query: 390 ALLAACKNHG 399
+++A G
Sbjct: 1322 SMIAVYAQSG 1331
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 233/411 (56%), Gaps = 34/411 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S+G L + R F+ + N WN++I A + N +A L+ MRR G ++ T
Sbjct: 156 ASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLV 215
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL------------- 166
+L ACS +L K +H+H+ G +DL + N LV Y DL
Sbjct: 216 SLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFK 275
Query: 167 ------------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ AR F++I +++ W MIS Y Q R +EAL L+++M
Sbjct: 276 NAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMK 335
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+ G P+ TLA+VLSAC Q G L G+ +H ++ G L +L+ MY + G +
Sbjct: 336 LLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVD 395
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A +LF MP +N+ +WNA+I LA HG A++AL FR + + P++ITFV +LSAC
Sbjct: 396 TAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACN 455
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G ++ G+ F +M+ VY ++P +EHY CMVDLLGR G++ +A +LIK M +PDVV+W
Sbjct: 456 HGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVW 515
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA---ESMK 436
GALL AC+ HG+I++ ++V+K+++ LE + G++V++SNM E E MK
Sbjct: 516 GALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMK 566
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 226/439 (51%), Gaps = 37/439 (8%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +C S+H+L Q+HA +++ D + L ++CAL + G + YA +LF+ I P+
Sbjct: 18 LLRRCGSVHRLNQLHAHLVVHG--VDDVTSQILASYCALPAGGGVWYARQLFDRIPDPDR 75
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F++N+LIRA +S P +A+ L M R G PN+ T F+LKAC+ V++ H
Sbjct: 76 FVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGV 135
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
V K G + V N L+ Y+ + L ++R+ FDE+ +R + W +MI+GYAQ+ EA
Sbjct: 136 VVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREA 195
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
LF+ M +G + TL S+L AC+ G LE G+ VH + +RG + IL ALV M
Sbjct: 196 CSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDM 255
Query: 261 YTKNG-------------------------ALAK------AKALFDSMPERNIATWNAMI 289
Y K G ALAK A+ F+ +PE++I +WNAMI
Sbjct: 256 YGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMI 315
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
S G EALDL+ +++ + P++ T VLSAC G + G+ I ++ +
Sbjct: 316 SCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH- 374
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
P + + ++D+ RCG+V A L M K +V+ W A++ A HG + A +
Sbjct: 375 NPGVALFNSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQDALMFFR 433
Query: 410 EII--ALEPNNHGVYVVLS 426
++ A P+ +LS
Sbjct: 434 SMVFDAFPPDEITFVALLS 452
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 10/259 (3%)
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
CAL+ + A F I + WN +I +A+ LY M+ G AP++
Sbjct: 284 LCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDE 343
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
T VL AC + L K IH + + + + + N L+ Y+ ++ A +F E
Sbjct: 344 FTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSE 403
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ ++ + W +I A RA +ALM F M+ + F P+ +T ++LSAC G LE G
Sbjct: 404 MPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAG 463
Query: 236 EKV-----HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMI 289
+ HV+ G E A +V + + G LAKA L MP R ++ W A++
Sbjct: 464 QYYFQAMRHVYNVKPGVEHYA----CMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALL 519
Query: 290 SGLASHGHAEEALDLFRKL 308
HGH + + ++L
Sbjct: 520 GACRIHGHIQIGKQVIKQL 538
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 216/371 (58%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G + A +F+ + WN+++ + P+KAI ++ M G P T
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L AC+++ L K +H V + L D+ V+N L+ YS ++ A +F+ + R
Sbjct: 354 EALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
T W MI GYAQ+ R +EAL F +M G +P+S T+ SV+ A A+ + +H
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ + + TALV MY+K GA+ A+ LFD + +R++ TWNAMI G +HG
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
ALDLF K++K + PNDIT++ V+SAC H+G +D G + F SMK+ YG+EP ++HYG M
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G++ EA + I+ M P + ++GA+L ACK H NIEV E+ K++ L P+
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEG 653
Query: 420 GVYVVLSNMYA 430
G +V+L+N+YA
Sbjct: 654 GYHVLLANIYA 664
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 204/398 (51%), Gaps = 4/398 (1%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P ++L + C SM +L QI +I + +H ++L++ S G ++ A R+F I
Sbjct: 51 PAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSL--FSKYGSINEAARVFEPID 108
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+++T+++ A + + + A+ MR P + FT++LK C + L K+
Sbjct: 109 DKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKE 168
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
IH + + ++ + +V Y+ +++A ++FD + R L W T+I+G++Q+
Sbjct: 169 IHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGF 228
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
A +AL L +M EG P+S+TL +VL A A G L +G+ +H + GF + TA
Sbjct: 229 AKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTA 288
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L MY+K G++ A+ +FD M ++ + +WN+M+ G +G E+A+ +F K+ +E I P
Sbjct: 289 LADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPT 348
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+T + L AC G ++ G+ + + ++ + I ++ + +C +V A ++
Sbjct: 349 GVTIMEALHACADLGDLERGKFVHKFVDQL-NLGSDISVMNSLISMYSKCKRVDIASDIF 407
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
+ + V W A++ +G + A E+ +L
Sbjct: 408 NNLNGRTHVS-WNAMILGYAQNGRVSEALNCFSEMKSL 444
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 194/391 (49%), Gaps = 10/391 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH Q+I +S + FA + ++ A D +Y ++F+ + + WNT+I +
Sbjct: 167 KEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY--KMFDRMPERDLVSWNTIIAGFS 224
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ KA+ L + M+ G P+ T VL A ++V L K IH + ++G ++
Sbjct: 225 QNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVN 284
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ L YS + AR +FD + +T+ W +M+ GY Q+ +A+ +F++ML EG
Sbjct: 285 ISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEG 344
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P VT+ L ACA G LE G+ VH FV + +L+ MY+K + A
Sbjct: 345 IDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIAS 404
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+++ R +WNAMI G A +G EAL+ F +++ + P+ T V V+ A
Sbjct: 405 DIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELS 464
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ I G + R ++ I +VD+ +CG + A +L M+ V+ W A+
Sbjct: 465 VTRHAKWIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARKLFD-MISDRHVITWNAM 522
Query: 392 LAACKNHG----NIEVAERVVKEIIALEPNN 418
+ HG +++ +++ K A+EPN+
Sbjct: 523 IDGYGTHGLGRAALDLFDKMKKG--AVEPND 551
>gi|297721835|ref|NP_001173281.1| Os03g0169300 [Oryza sativa Japonica Group]
gi|19071631|gb|AAL84298.1|AC073556_15 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108706397|gb|ABF94192.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125585070|gb|EAZ25734.1| hypothetical protein OsJ_09569 [Oryza sativa Japonica Group]
gi|215769145|dbj|BAH01374.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674238|dbj|BAH92009.1| Os03g0169300 [Oryza sativa Japonica Group]
Length = 510
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 183/485 (37%), Positives = 266/485 (54%), Gaps = 57/485 (11%)
Query: 11 PPLP-IPPLSLL--ADKCKSMHQLKQIHAQMIISSRI---QDHFAA-SRLLAFCALSSSG 63
PP P I P L+ A KC + +L+ +H ++ + D AA ++LL F A+S +G
Sbjct: 3 PPSPSISPGDLVSFAGKCSTKRKLRLLHGALLRRRHLLPTADAVAALAKLLRFAAVSPAG 62
Query: 64 DLSYATRLFN-------SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
DL +A L + S S F +NTL+R A+S +P AI L+ MRR G AP+
Sbjct: 63 DLRHAAALLSLHLPFLSSASSHLAFFYNTLMRGLAASSSPAAAIELFSAMRRAGAAPDAF 122
Query: 117 TFTFVLKACSN-VRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVRCYSV--------- 162
TFTF LK+CS V +H K G +HV N L+ YS
Sbjct: 123 TFTFALKSCSRCVSQRRLPSDLHAQAIKHGCLGAGSSHVHVHNALLHGYSSRAAVGDARR 182
Query: 163 ----------------------SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
++DL+ AR VFD++ +R + WT MIS YA++ R EA
Sbjct: 183 VFDEMPARDVISFSGLLTLHLKANDLDAARVVFDQMPHRDVVSWTAMISAYARARRPQEA 242
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L LFD M + +P+ VT+ SV+SAC G L GE+V +V GF L AL+ M
Sbjct: 243 LALFDAMPV---QPDEVTMLSVVSACTALGDLATGERVCQYVDSNGFGWMVSLRNALMDM 299
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EKEQIVPNDI 318
Y K G+L +A+ LFD M R++A+WN IS ASHG E + LF ++ + + + P+
Sbjct: 300 YAKCGSLTEARNLFDGMTVRSLASWNTFISAYASHGDVESTVALFHRMLADGKSVKPDGT 359
Query: 319 TFVGVLSACCHAGFIDVGRQIFGS-MKRVYG-IEPKIEHYGCMVDLLGRCGKVLEAEELI 376
T + VL+A H GF++ GR +F + + YG ++ IEHYGCMVDLLGR G++ EA ++I
Sbjct: 360 TLLAVLTAYAHKGFVEEGRAMFNAILSGNYGKVDLTIEHYGCMVDLLGRAGQLEEAYKMI 419
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
++M + V+WGALL AC+ HG+I +AER V+++ +L P G Y++LS+MYA +
Sbjct: 420 EQMPIPSNSVVWGALLGACRTHGDINMAERAVQKLRSLNPEEGGYYILLSDMYAASGRTT 479
Query: 437 MQLEI 441
+EI
Sbjct: 480 EAMEI 484
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 233/434 (53%), Gaps = 39/434 (8%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAF---CALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
+++HA ++ + F + LL F C L G ++F+ ++ P +W +IR
Sbjct: 111 EEVHASVVRTGFACSEFVSGALLGFYVACGLVGKG-----RQVFDEMRQPGLVLWTLIIR 165
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
A P+KA+ L+ MR G P+ + V+ AC + L K +H + KSG+++
Sbjct: 166 AYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEV 225
Query: 149 DLHVVNCLVRCYSVSSDLNNA-------------------------------RQVFDEIR 177
D V + L+ Y L+ A +Q+F +
Sbjct: 226 DAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMP 285
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+R + W +MI G+A+ + EAL F +M G PN++TL S LSACA G L+ G
Sbjct: 286 DRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAW 345
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +V L ++L+ MY+K G + KA +F+ R++ TW +++ GLA HG
Sbjct: 346 IHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGR 405
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E+AL F K+++ Q+ P+D+T VGVLSAC HAG +D G F SM++V+G+ PK+EHYG
Sbjct: 406 GEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYG 465
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
MVDLLGR G + EA +LI M + + ++WGA L+AC+ H N+E+ E + ++ L P
Sbjct: 466 XMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPR 525
Query: 418 NHGVYVVLSNMYAE 431
+ V+LSNMYAE
Sbjct: 526 DPWARVMLSNMYAE 539
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 193/434 (44%), Gaps = 69/434 (15%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
R P L S + ++L +IH I + ++D AASRL CA
Sbjct: 7 RFPQLSHTRFSFRLHPLTNPNKLPRIHGNTIAT--VEDPSAASRL--DCA---------- 52
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASS--LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
N F+WNT+IR Q + + D + YM R G PN HTF ++LKA
Sbjct: 53 ----------NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALV 102
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
+ + + +++H V ++G V L+ Y + RQVFDE+R L +WT
Sbjct: 103 SGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTL 162
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
+I Y +AL LF M G P+ V +++V+SAC G L + + +H F++ G
Sbjct: 163 IIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSG 222
Query: 247 FEMGAILGTALVHMYTKNGALAKA-------------------------------KALFD 275
E+ A + + L+ Y + G+L A K LF
Sbjct: 223 IEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQ 282
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
SMP+R++ +WN+MI G A G +EAL F ++E + PN +T + LSAC G +D
Sbjct: 283 SMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDT 342
Query: 336 GRQIFG-----SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G I M R ++ ++D+ +CG + +A ++ + + D+ W +
Sbjct: 343 GAWIHAYVDKNDMNRDGSLDSS------LIDMYSKCGDIDKAVQIFEEST-RRDLFTWTS 395
Query: 391 LLAACKNHGNIEVA 404
++ HG E A
Sbjct: 396 IVCGLAMHGRGEKA 409
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 183 VWTTMISGYAQS--FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
VW TMI ++ + L+ + Q L G PN T +L A ++ GE+VH
Sbjct: 56 VWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHA 115
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
V GF + AL+ Y G + K + +FD M + + W +I E+
Sbjct: 116 SVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEK 175
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL+LFR + + + P+ + V+SAC G + V + + +++ GIE ++
Sbjct: 176 ALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKS-GIEVDAFVSSTLI 234
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
G CG + A + K ++V+W ++ H N+E+ +++ + +
Sbjct: 235 STYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSM 284
>gi|449521058|ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 376
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 224/375 (59%), Gaps = 7/375 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFA--ASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
M L+Q+HA ++ FA S+++AFCALS G+++YA +F I PN F WN+
Sbjct: 1 MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
Query: 86 LIR--AQASSLNPDKAIFLYMNMRRTGF-APNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
LI+ +Q +L+ + IFL+ + TG+ PN T FVLKAC+ V + Q+H+HV
Sbjct: 61 LIKGYSQIHTLSKEP-IFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVL 119
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G L V LV Y ++ AR+VF+E+ R L WT MISG+A+ +EA+
Sbjct: 120 KDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAME 179
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF +M G +P+++TL SV+SACA +G L++G +H +++ L TALV MY
Sbjct: 180 LFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYA 239
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G + +AK +F MP ++ W++MI G A HG A++A+D F+++ + ++ P+ +TF+
Sbjct: 240 KCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLA 299
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSAC H G + GR+ F S+ +GIEP +EHYGC VDLL R G V EA + M
Sbjct: 300 VLSACAHGGLVSRGRR-FWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIP 358
Query: 383 PDVVMWGALLAACKN 397
P+ W +LL CK
Sbjct: 359 PNAATWRSLLMGCKK 373
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 241/437 (55%), Gaps = 32/437 (7%)
Query: 36 AQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLN 95
A++I Q + AS + L G + A +LFN + + W+ LI +
Sbjct: 226 AKLIFDQMPQRNIVASNSM-IVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGM 284
Query: 96 PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC 155
++A+ +++ M G ++ VL AC+++ + K IH V + G++ +++ N
Sbjct: 285 YEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNA 344
Query: 156 LVRCYSVSSDL-------------------------------NNARQVFDEIRNRTLNVW 184
L+ YS S ++ AR +FD + + + W
Sbjct: 345 LIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSW 404
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+ +ISGYAQ +E L LF +M + P+ L SV+SAC L+ G+ VH +++
Sbjct: 405 SAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRK 464
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G ++ ILGT L+ MY K G + A +F+ M E+ +++WNA+I GLA +G E +LD+
Sbjct: 465 NGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDM 524
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +++ ++PN+ITF+GVL AC H G +D GR F SM +GIEP ++HYGCMVDLLG
Sbjct: 525 FSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLG 584
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R G + EAE+LI+ M PDV WGALL ACK HG+ E+ ERV +++I L+P++ G +V+
Sbjct: 585 RAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVL 644
Query: 425 LSNMYAEAESMKMQLEI 441
LSN++A + LE+
Sbjct: 645 LSNIFASKGDWEDVLEV 661
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 229/487 (47%), Gaps = 97/487 (19%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
+P + + L C ++ Q +I +QMI++ I D FAASRLL F S L Y+
Sbjct: 36 KPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSL 95
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
++F+ I++ N FMWNT++RA S + +KA+ LY M + P+ +T+ V++AC+ VR
Sbjct: 96 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VR 154
Query: 130 SLNC-CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
L K+IH HV K G D D++V N L+ Y+V ++ +AR++FDE W +++
Sbjct: 155 LLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 214
Query: 189 SGYAQSFRANEALMLFDQM----------------------------------------- 207
+GY + EA ++FDQM
Sbjct: 215 AGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSA 274
Query: 208 LMEGFEPN---------------------SVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
L+ G+E N V + SVLSACA ++ G+ +H V G
Sbjct: 275 LISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 334
Query: 247 FEMGAILGTALVHMYT-------------------------------KNGALAKAKALFD 275
E L AL+HMY+ K G++ KA+ALFD
Sbjct: 335 IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFD 394
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
MPE++I +W+A+ISG A H E L LF +++ QI P++ V V+SAC H +D
Sbjct: 395 VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQ 454
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
G+ + +++ G++ + ++D+ +CG V A E+ M K V W AL+
Sbjct: 455 GKWVHAYIRK-NGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEK-GVSSWNALIIGL 512
Query: 396 KNHGNIE 402
+G +E
Sbjct: 513 AVNGLVE 519
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 50/287 (17%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS---DLNNARQVFDEIRN 178
L C N++ N +I + + +G D + L++ +S S L+ + Q+FD I N
Sbjct: 48 LHNCHNLKQFN---RILSQMILTGFISDTFAASRLLK-FSTDSPFIGLDYSLQIFDRIEN 103
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK- 237
+W TM+ Y QS A +AL+L+ M+ P++ T V+ ACA LE G K
Sbjct: 104 SNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVR-LLEFGGKE 162
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H V GF+ + L++MY G + A+ LFD P + +WN++++G G
Sbjct: 163 IHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGD 222
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EEA +F ++ + IV ++
Sbjct: 223 VEEAKLIFDQMPQRNIVASN---------------------------------------- 242
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
M+ LLG+ G+V+EA +L M K D+V W AL++ + +G E A
Sbjct: 243 SMIVLLGKMGQVMEAWKLFNEMDEK-DMVSWSALISGYEQNGMYEEA 288
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 250/436 (57%), Gaps = 16/436 (3%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAAS----RLLAFCALSSSGDLSY 67
PL + L+L+ + + + +QIHA+ I + + + S RL + C G +
Sbjct: 114 PLVLKALALI----QGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVC-----GSIHD 164
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
++F+ + W TLI+A + +A+ +M M + T VL ACSN
Sbjct: 165 VQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSN 224
Query: 128 VRSLNCCKQIHTHVSKSGLDL--DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ LN +++H+++ + +D+ D+ V N L+ Y DLN+A +VFDE+ + + W
Sbjct: 225 LGDLNLGQKVHSYI-RHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWN 283
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
MISG A R EAL F M +G +P+ VTL VL++CA G LE+G+ VH +++
Sbjct: 284 AMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRN 343
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
+G AL+ MY K G++ +A +F+SM R++ ++ AMI GLA HG A A +F
Sbjct: 344 HILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVF 403
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
++ + I PN++TF+G+L AC H G + G++ F M Y + P+ EHYGCM+DLLGR
Sbjct: 404 SEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGR 463
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G V EAEE+I +M +PDV GALL AC+ HGN+++ E V++++ L+P+ G Y+++
Sbjct: 464 AGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILM 523
Query: 426 SNMYAEAESMKMQLEI 441
+N+Y+ K L+I
Sbjct: 524 TNLYSSVHRWKDALKI 539
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 215/405 (53%), Gaps = 14/405 (3%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
+ CKS+ LKQIH I + + + + + SSS DL Y + + F
Sbjct: 14 NSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHSHDAQF 73
Query: 82 ---MWNTLIRA-QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
+ N +IR+ +S+N FL M G P+ T VLKA + ++ + +QI
Sbjct: 74 CLSLCNAIIRSISRNSINLSPMEFLN-EMLVVGLEPDGFTIPLVLKALALIQGIREGQQI 132
Query: 138 HTHVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
H K+G+ +++V N L+R YSV +++ ++VFDE +R L WTT+I + ++
Sbjct: 133 HARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGL 192
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA--ILG 254
+ A+ F +M + TL VLSAC+ G L LG+KVH +++ +M A +G
Sbjct: 193 YSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR-HYIDMKADVFVG 251
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ MY K L A +FD MP +N+ TWNAMISGLA G EALD FR ++ + +
Sbjct: 252 NALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVK 311
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+++T VGVL++C + G +++G+ + M+R + + K ++D+ +CG + EA
Sbjct: 312 PDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEAFR 370
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPN 417
+ + M + DV + A++ HG A +V E+ + +EPN
Sbjct: 371 VFESMK-RRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPN 414
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 217/369 (58%), Gaps = 1/369 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + AT F+ I P+ F WNT++ A S N ++ + ++ M GF+ N++T+ VL
Sbjct: 402 GAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVL 461
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+ C+++ +L Q+H + KSGL D V LV Y+ S +A VF++++ R
Sbjct: 462 RCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAF 521
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT ++SGYA++ A + + F ML E P+ TLA LS C+ L G ++H +
Sbjct: 522 SWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWA 581
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G+ + G ALV MY K G +A A+ LF R+ WN +I G + HGH +AL
Sbjct: 582 IKSGWNSSVVSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKAL 640
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
D F+++ E P+ ITFVGVLSAC HAG ++ GR+ F S+ +YGI P +EHY CMVD+
Sbjct: 641 DAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDI 700
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L + G+++EAE LI +M PD +W +L AC+ H NIE+AER + + LEP++
Sbjct: 701 LSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSS 760
Query: 423 VVLSNMYAE 431
++LSN+YA+
Sbjct: 761 ILLSNIYAD 769
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 192/393 (48%), Gaps = 18/393 (4%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
+++ + +++HA+++ S+ D F LL +C G L A R+F+ + + W
Sbjct: 64 RTLRRGQELHARLLRSALHPDTFLLDSLLNMYC---KCGRLVDARRVFDGMPHRDIVAWT 120
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK- 143
+I A ++ + D+A+ ++ M + G APN T VLKACS Q+H V K
Sbjct: 121 AMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKL 180
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+GLD D +V + LV Y+ +L+ A V + R+ W +++GYA+ +++
Sbjct: 181 NGLD-DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMII 239
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
++++ G E + TL +VL C + G + G+ VH V RG E +L + LV MY++
Sbjct: 240 IEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSR 299
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
+ +A +F + E ++ +AMIS H A EALDLF K+ + PN FVG+
Sbjct: 300 CLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGI 359
Query: 324 LSACCHAGFIDVGRQIFGSMKR-----VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
G ++ R + + + + G+ I +++ + G V +A
Sbjct: 360 AGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAI------LNMYVKVGAVQDATVTFD- 412
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++ +PD W +L+A + N E R+ K++
Sbjct: 413 LIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQM 445
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 164/381 (43%), Gaps = 5/381 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ +HA +I D+ S L+ + S + +Y +F I P+ + +I
Sbjct: 272 QSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAY--EVFIRIDEPDVVHCSAMISCFD 329
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+A+ L++ M G PN + F + S N C+ +H ++ KSG +
Sbjct: 330 RHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKG 389
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + ++ Y + +A FD I W T++S + + L +F QM EG
Sbjct: 390 VGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEG 449
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F N T SVL C L G +VH + G + + LV MY ++G A
Sbjct: 450 FSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSAC 509
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ + ER+ +W ++SG A AE+ ++ FR + +E I P+D T LS C
Sbjct: 510 LVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMA 569
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ G Q+ S G + G +VD+ +CG + +AE L + D V W +
Sbjct: 570 SLGSGLQLH-SWAIKSGWNSSVVS-GALVDMYVKCGNIADAEMLFHESETR-DQVAWNTI 626
Query: 392 LAACKNHGNIEVAERVVKEII 412
+ HG+ A K+++
Sbjct: 627 ICGYSQHGHGYKALDAFKQMV 647
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 172/345 (49%), Gaps = 11/345 (3%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L+ C+ R+L +++H + +S L D +++ L+ Y L +AR+VFD + +R +
Sbjct: 57 LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-V 240
WT MIS + + +++AL +F +M EG PN TLASVL AC+ + +VH
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQ 176
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
VK+ G + +G++LV YT G L A+ + +PER+ +WNA+++G A HG
Sbjct: 177 VVKLNGLD-DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRR 235
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYGCM 359
+ + KL + T VL C G G+ + S +KR G+E C+
Sbjct: 236 VMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKR--GLETDNVLNSCL 293
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI-EVAERVVK-EIIALEPN 417
V++ RC EA E+ R + +PDVV A+++ H E + VK + ++P
Sbjct: 294 VEMYSRCLSAEEAYEVFIR-IDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKP- 351
Query: 418 NHGVYVVLSNMYAEAESMKM--QLEILLVQVLFAGLASAADILQN 460
NH ++V ++ + + + + +V+ FA L D + N
Sbjct: 352 NHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILN 396
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 220 ASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE 279
A+ L CA L G+++H + L +L++MY K G L A+ +FD MP
Sbjct: 54 AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
R+I W AMIS + G +++ALD+F ++ +E I PN T VL AC Q+
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQV 173
Query: 340 FGSMKRVYGI-EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
G + ++ G+ +P + +V+ CG++ AE ++ + + D V W ALL H
Sbjct: 174 HGQVVKLNGLDDPYVG--SSLVEAYTSCGELDAAETVLLGLPERSD-VSWNALLNGYARH 230
Query: 399 GNIEVAERVVKEIIA 413
G+ ++++++A
Sbjct: 231 GDYRRVMIIIEKLVA 245
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/403 (37%), Positives = 225/403 (55%), Gaps = 4/403 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IHA M D F S L+ + G L + +F+ + + WN++I A +
Sbjct: 187 KEIHAHMKRIWLKPDVFVDSALVTM--FAKCGSLKESREVFDDCRWKDVLFWNSMIVAYS 244
Query: 92 SSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
S +P +AI L+ +M + PN T+T VL ACS V L K++H + +G D
Sbjct: 245 QSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFD 304
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
N LV Y+ + AR+VFD ++ RT+ WT +IS Y + EAL L+ +M
Sbjct: 305 AAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGS 364
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EG EPN +T ASVLSAC+ G LE G+ VH +K G++ + ALV +Y K G++
Sbjct: 365 EGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDS 424
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A+ +FD M RN+ +W AMIS A H H+EEA+ L++ ++ E + + + VL+AC
Sbjct: 425 ARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQ 484
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
AG ++ R FG + R G K+E Y CM +LGR G++ EAEEL+ M ++ + V W
Sbjct: 485 AGLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWM 544
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LLAACK H ++E RV + + LEP N YV+LSN+Y A
Sbjct: 545 GLLAACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAA 587
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 211/400 (52%), Gaps = 11/400 (2%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L C + K+IH ++ + ++ + + L+ S G L A ++F+ +
Sbjct: 71 PAYGNLLRDCGELAAGKKIHEHVVKNGYYENVYVGNHLVQM--YSKCGSLEDAKKVFDGM 128
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV--RSLNC 133
+ + W+ +I +AI LY M P+ TF+ VL ACS++ R+L
Sbjct: 129 RRRDSISWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEV 185
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
K+IH H+ + L D+ V + LV ++ L +R+VFD+ R + + W +MI Y+Q
Sbjct: 186 GKEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQ 245
Query: 194 SFRANEALMLFDQMLMEG--FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
S EA+ LF M EPN++T +VL+AC+ LE G++VH + GF+ A
Sbjct: 246 SGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDA 305
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+LV+MY K G++ +A+ +FD M +R + +W +IS GH EALDL+RK+ E
Sbjct: 306 AAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSE 365
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
+ PN ITF VLSAC G ++ G+ + MK G +P + +V L G+CG V
Sbjct: 366 GVEPNGITFASVLSACSSLGALEEGKAVHAQMK-AAGYKPDLAVANALVSLYGKCGSVDS 424
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
A ++ RM + +VV W A+++A +H + E A ++ K +
Sbjct: 425 ARKVFDRMKIR-NVVSWTAMISAYAHHRHSEEAIQLYKAM 463
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 166/312 (53%), Gaps = 14/312 (4%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+L+ C L K+IH HV K+G +++V N LV+ YS L +A++VFD +R R
Sbjct: 76 LLRDCGE---LAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRD 132
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG--CLELGEKV 238
W+ MI+GY + A EA+ L+ M +P+ T ++VL+AC+ G LE+G+++
Sbjct: 133 SISWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEI 189
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H +K + + +ALV M+ K G+L +++ +FD +++ WN+MI + GH
Sbjct: 190 HAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHP 249
Query: 299 EEALDLFRKLEKEQ--IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
EA++LF+ + + PN IT+ VL+AC ++ G+++ M G +
Sbjct: 250 REAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDA-GFQFDAAAE 308
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--L 414
+V++ +CG + EA E+ M + VV W +++A G+ A + +++ + +
Sbjct: 309 NSLVNMYAKCGSITEAREVFDGMKQRT-VVSWTGIISAYVRKGHPREALDLYRKMGSEGV 367
Query: 415 EPNNHGVYVVLS 426
EPN VLS
Sbjct: 368 EPNGITFASVLS 379
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 17/226 (7%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
+ AL+ D E P ++L C G L G+K+H V G+ +G L
Sbjct: 55 DNALVWIDSHQQEDCAP---AYGNLLRDC---GELAAGKKIHEHVVKNGYYENVYVGNHL 108
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY+K G+L AK +FD M R+ +W+ MI+G HG A EA+ L++ + I P+
Sbjct: 109 VQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIAGYVRHGLAREAIKLYKAM---AIDPDG 165
Query: 318 ITFVGVLSACCHAG--FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
TF VL+AC G ++VG++I MKR++ ++P + +V + +CG + E+ E+
Sbjct: 166 FTFSAVLNACSSLGPRALEVGKEIHAHMKRIW-LKPDVFVDSALVTMFAKCGSLKESREV 224
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA----LEPN 417
WK DV+ W +++ A G+ A + K + + +EPN
Sbjct: 225 FDDCRWK-DVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPN 269
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 216/374 (57%), Gaps = 1/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S GDL+ A R+F + W ++I D AI L+ M+ G P+ + T
Sbjct: 399 SKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVT 458
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L AC+ +L K +H ++ ++ L+ + V N L Y+ + +A VF ++ +
Sbjct: 459 SILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKK 518
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W TMI GY ++ NEAL LF +M E +P+ T+A +L ACA L+ G ++H
Sbjct: 519 DVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIH 577
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ G+ + A+V MY K G L A++LFD +P +++ +W MI+G HG+
Sbjct: 578 GYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGS 637
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA++ F ++ I P++++F+ +L AC H+G +D G +IF MK+ IEP +EHY CM
Sbjct: 638 EAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACM 697
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R G +++A + IK M KPD +WGALL C+ H ++++AE+V + I LEP N
Sbjct: 698 VDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENT 757
Query: 420 GVYVVLSNMYAEAE 433
G YV+L+N+YAEAE
Sbjct: 758 GYYVLLANIYAEAE 771
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 179/334 (53%), Gaps = 6/334 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +LF+ + + WN++I + D+ I +++ M G + T V AC+N
Sbjct: 305 AQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACAN 364
Query: 128 VRSLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
+ +L K +H++ K+ LD ++ N L+ YS DLN+A +VF+ + +T+ WT+
Sbjct: 365 IGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTS 424
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MI+GY + ++ A+ LFD+M G P+ + S+L+ACA +G L+ G+ VH +++
Sbjct: 425 MITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENN 484
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
E + + AL MY K G++ A +F M ++++ +WN MI G + EAL LF
Sbjct: 485 LETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFA 544
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGR 365
++++E P+ T +L AC +D GR+I G +++ Y + + + +VD+ +
Sbjct: 545 EMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTN--AVVDMYVK 601
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
CG ++ A L M+ D+V W ++A HG
Sbjct: 602 CGLLVLARSLFD-MIPNKDLVSWTVMIAGYGMHG 634
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 169/333 (50%), Gaps = 3/333 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GDL +F+ + F+WN +I + S N ++I L+ M G PN +TF+ +L
Sbjct: 199 GDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSIL 258
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
K + V + +Q+H + K G + VVN L+ Y V + A+++FDE+ +R +
Sbjct: 259 KCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVI 318
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF- 241
W +MISGY ++ + + +F +ML+ G + + T+ +V ACA G L LG+ +H +
Sbjct: 319 SWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYS 378
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+K + L+ MY+K G L A +F+ M E+ + +W +MI+G G ++ A
Sbjct: 379 IKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGA 438
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+ LF +++ +VP+ +L+AC G + G+ I R +E + D
Sbjct: 439 IKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGK-IVHDYIRENNLETNSFVSNALTD 497
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ +CG + +A ++ M K DV+ W ++
Sbjct: 498 MYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGG 529
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 168/356 (47%), Gaps = 39/356 (10%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ +L+ C+ +S+ +++ + + SG+ +D + LV Y DL R VFD++
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ +W MIS Y+ S E++ LF QML G +PNS T +S+L A +E G +
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH + GF + +L+ Y + A+ LFD + +R++ +WN+MISG +G
Sbjct: 273 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+ +++F K+ + + T V V AC + G + +G+ + + ++ ++
Sbjct: 333 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNN 392
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWK----------------------------------P 383
++D+ +CG + A + +RM K P
Sbjct: 393 TLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVP 452
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIA---LEPNNHGVYVVLSNMYAEAESMK 436
DV ++L AC +GN++ + ++V + I LE N+ V L++MYA+ SMK
Sbjct: 453 DVYAVTSILNACAINGNLK-SGKIVHDYIRENNLETNSF-VSNALTDMYAKCGSMK 506
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 238/423 (56%), Gaps = 8/423 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
+IH+ ++ + D F + LL+ + D A ++F+ I N W +I S
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFD--DALKVFDDIPDKNVVSWTAIITGYIS 192
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
S + +AI + + G P+ + VL AC+ + + I ++S SG+ ++ V
Sbjct: 193 SGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFV 252
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
L+ Y +L A +F + + + W+TMI GYA + +AL LF QM E
Sbjct: 253 ATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ T+ VLSACA G L+LG + F +LGTAL+ MY+K G++ +A
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F +M +++ WNAM+ GL+ +GHA+ LF +EK I P++ TF+G+L C H GF
Sbjct: 373 IFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ GRQ F +MKRV+ + P IEHYGCMVDLLGR G + EA +LI M KP+ V+WGALL
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLEILLVQV 446
CK H + +AE+V+K++I LEP N G YV LSN+Y+ EAE ++ ++ +Q
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQK 552
Query: 447 LFA 449
+ A
Sbjct: 553 IRA 555
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 219/398 (55%), Gaps = 9/398 (2%)
Query: 8 LRQPPLPIPPLSL-----LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
L P P+ +L L++ +QLK IHA+++ QD++ + +L CAL
Sbjct: 4 LTNPSSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILC-CALDF- 61
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G +Y+ +F+ ++ PN F+WNT+IR S D AI LY +MR GF PN T FVL
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC+ + +IH+ + K+G D D+ V L+ Y + ++A +VFD+I ++ +
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT +I+GY S EA+ F ++L G +P+S +L VL+ACA+ G GE + ++
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + T+L+ MY K G L +A +F +MPE++I +W+ MI G A +G ++AL
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
DLF +++ E + P+ T VGVLSAC G +D+G M R + + ++D+
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDM 360
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+CG V +A E+ M K D V+W A++ +G+
Sbjct: 361 YSKCGSVTQAWEIFTAMK-KKDRVVWNAMMVGLSMNGH 397
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 251/448 (56%), Gaps = 42/448 (9%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + L + H + Q + A++++ C ++ G ++A R+F I +PN + N
Sbjct: 20 CATFRDLLRAHGLAVRLCLSQSSYVATQIVHIC--NAHGRAAHAARVFAQIPAPNLHLHN 77
Query: 85 TLIRAQASSLNPDKAIFLYMNMRR-------TGFA-PNQHTFTFVLKACSNVRSLNCCKQ 136
+I+A A + A+ +Y+ M R GF+ ++ T+ F+LKAC + + +Q
Sbjct: 78 AMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAASRLGRQ 137
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA---Q 193
+H HV++SG + V N L+ Y+ DL+ AR+ FD +R + + W T+IS +A Q
Sbjct: 138 VHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHARMGQ 197
Query: 194 SFRANE----------------------------ALMLFDQMLMEGFEPNSVTLASVLSA 225
RA E A+ +F M MEGFEP+ V++ +VL A
Sbjct: 198 MRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLPA 257
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CAQ G LELG ++ + G + AL+ MY K G + +A LF M E+++ +W
Sbjct: 258 CAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDVISW 317
Query: 286 NAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
+ I GLA+HG A EA+ LF +++E +++PN ITFVG+LSAC HAG +D G + MK
Sbjct: 318 STAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYLDQMK 377
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
YG+EP +EHYGC+VDLLGR G++ A + I+ M PD +WG+LL+AC++HG++E A
Sbjct: 378 EDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGDVETA 437
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ ++ LEP + G V+L+N+Y A
Sbjct: 438 VVAAERLVELEPGDVGNLVMLANVYGAA 465
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 44/327 (13%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L+ C+ R L + H + L +V +V + +A +VF +I L
Sbjct: 17 LRTCATFRDL---LRAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAARVFAQIPAPNL 73
Query: 182 NVWTTMISGYAQSFRANEALMLFDQML-------MEGFE-PNSVTLASVLSACAQSGCLE 233
++ MI YAQ+ +A+ ++ +ML GF + T +L AC
Sbjct: 74 HLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAASR 133
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG +VH V G E A++ +L+ MYT+ G L+ A+ FD M E+++ +WN +IS A
Sbjct: 134 LGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHA 193
Query: 294 SHGHAEEALDL-------------------------------FRKLEKEQIVPNDITFVG 322
G A +L FR ++ E P+D++ V
Sbjct: 194 RMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVA 253
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VL AC G +++GR I+ + +G+ K+ ++++ +CG + EA +L M K
Sbjct: 254 VLPACAQLGALELGRWIYAYCSK-HGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEK 312
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVK 409
DV+ W + HG A R+ +
Sbjct: 313 -DVISWSTAIGGLAAHGRAREAVRLFE 338
>gi|449435190|ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 609
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 235/421 (55%), Gaps = 40/421 (9%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C ++ +L QIHA ++ ++ +++H P+ F WN
Sbjct: 199 CTNVLELYQIHAHVLRTNMLENH------------------------------PSSFYWN 228
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+IR+ P A+F+Y++M R G P+ +T V KA S + + Q+H+ +
Sbjct: 229 IIIRSYTRLEVPRIALFVYIDMLRAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRL 288
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G + D + + L+ YS DL A +VF++ NR L W +I+G +Q RA EA+ +F
Sbjct: 289 GFEFDQYSESGLISLYSKIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMF 348
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV---KMRGFEMGAILGTALVHMY 261
++ G EP+ T+ SV SAC G LEL ++H FV K+ G + ++ +L+ MY
Sbjct: 349 IKLRQSGLEPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTG-KSNILMLNSLIDMY 407
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + A +F +M RN+++W ++I G A HG ++AL+ F+ + + + PN +TFV
Sbjct: 408 GKCGRMDLAMKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFV 467
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVLSAC H G I+ G+ F MK VYG +P++ HYGCMVDLL + G + EA +I+ M
Sbjct: 468 GVLSACVHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPM 527
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESM 435
K + ++WG L+ C+ HGN+E+ E K + LEP N GVYVVLSN+YA EA+ M
Sbjct: 528 KANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKM 587
Query: 436 K 436
+
Sbjct: 588 R 588
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 234/416 (56%), Gaps = 13/416 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
K H +I D + LL+ +C G LS+A RLF Q + WN +I
Sbjct: 335 KAFHGLIIRRHYAPDEMVDNSLLSMYCKF---GMLSFAERLFQRSQGSIEY-WNFMIVGY 390
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
K I L+ M+ G + +C + +N + IH +V K +D +
Sbjct: 391 GRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETI 450
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ Y +N + ++F+ R + +W +IS + EA+ LFD M+ME
Sbjct: 451 SVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIME 509
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
PN+ TL VLSAC+ LE GE++H ++ +GF++ LGTALV MY K G L K+
Sbjct: 510 DQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKS 569
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ +FDSM E+++ WNAMISG +G+AE A+++F +E+ + PN+ITF+ +LSAC HA
Sbjct: 570 REVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHA 629
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G ++ G+ +F M+ Y ++P ++HY CMVDLLGR + EAEEL+ M PD +WGA
Sbjct: 630 GLVEEGKNVFAKMQS-YSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGA 688
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
LL+ACK H IE+ R+ K I EP N G Y++++NMY+ EAE+++ ++
Sbjct: 689 LLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEAENVRRTMK 744
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 178/381 (46%), Gaps = 16/381 (4%)
Query: 55 AFCALSSSGD-LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--- 110
+F +L S D ++ A ++F+ I + W L+ + + + M R G
Sbjct: 150 SFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDS 209
Query: 111 FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNAR 170
PN T AC N+ L + +H V K+G+ L + + ++ Y A
Sbjct: 210 QKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAY 269
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
Q F E+ N+ L WT+MI YA+ ++ + F +ML P+ + + +LS S
Sbjct: 270 QSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSV 329
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
+ G+ H + R + ++ +L+ MY K G L+ A+ LF + +I WN MI
Sbjct: 330 DVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIV 388
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
G G + + LFR+++ I + V +++C G I++GR I ++ + + ++
Sbjct: 389 GYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGF-VD 447
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK- 409
I ++++ G+C K+ + + R + DV++W AL++A H +++ E +
Sbjct: 448 ETISVTNSLIEMYGKCDKMNVSWRIFNRS--ERDVILWNALISA---HIHVKHYEEAISL 502
Query: 410 -EIIALE---PNNHGVYVVLS 426
+I+ +E PN + VVLS
Sbjct: 503 FDIMIMEDQNPNTATLVVVLS 523
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 195/465 (41%), Gaps = 51/465 (10%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L+ + ++ L HA + + + F A++L++ + + ++ LF+S+ +
Sbjct: 17 LSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISL--YDTLNHPTSSSTLFHSLPFKDT 74
Query: 81 FMWNTLIRAQAS-SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F+WN+ ++ S SL P F Y MR PN TF V + ++ + +H
Sbjct: 75 FLWNSFLKTLFSRSLYPQFLSF-YSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHA 133
Query: 140 HVSKSGLDLDLHVV-NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
K G + V + V YS ++N+A +VFDEI R + WT ++ GY Q+ +
Sbjct: 134 LACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESE 193
Query: 199 EALMLFDQMLMEGFE---PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
L +M G + PN+ TL AC G L G +H V G + +
Sbjct: 194 MGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQS 253
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
+++ MY K G +A F + +++ +W +MI A G + + F ++ + Q+ P
Sbjct: 254 SVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCP 313
Query: 316 NDITFVGVLSACCHAGF---IDV--GRQIFG------------------SMKRVYGI--- 349
+ G++ C +GF +DV G+ G SM +G+
Sbjct: 314 D-----GMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSF 368
Query: 350 --------EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW---KPDVVMWGALLAACKNH 398
+ IE++ M+ GR GK ++ +L + M + + + V + +A+C
Sbjct: 369 AERLFQRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQL 428
Query: 399 GNIEVAERVVKEII-ALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
G I + + +I V L MY + + M + I
Sbjct: 429 GEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIF 473
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 224/403 (55%), Gaps = 3/403 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+++ K IH Q+I S D + L+ A G +YA ++F I + W LI
Sbjct: 207 LNEGKAIHGQVIKSGINPDSHLWNSLVNVYA--KCGSANYACKVFGEIPERDVVSWTALI 264
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ + ++ M GF PN +TF +L++CS++ ++ KQ+H + K+ LD
Sbjct: 265 TGFVAE-GYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLD 323
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ V LV Y+ + L +A +F+ + R L WT +++GYAQ + +A+ F QM
Sbjct: 324 GNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQM 383
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
EG +PN TLAS LS C++ L+ G ++H G + +ALV MY K G +
Sbjct: 384 QREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCV 443
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +FD + R+ +WN +I G + HG +AL F + E VP+++TF+GVLSAC
Sbjct: 444 EDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSAC 503
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G I+ G++ F S+ ++YGI P IEHY CMVD+LGR GK E E I+ M +V++
Sbjct: 504 SHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLI 563
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
W +L ACK HGNIE ER ++ LEP Y++LSNM+A
Sbjct: 564 WETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFA 606
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 172/331 (51%), Gaps = 5/331 (1%)
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+ F ++ N N L+ + D+ + + + GF PN +TF +LK C++
Sbjct: 146 QFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKG 205
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
LN K IH V KSG++ D H+ N LV Y+ N A +VF EI R + WT +I+
Sbjct: 206 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 265
Query: 190 GY-AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
G+ A+ + L +F+QML EGF PN T S+L +C+ ++LG++VH + +
Sbjct: 266 GFVAEGY--GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLD 323
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+GTALV MY KN L A+ +F+ + +R++ W +++G A G E+A+ F ++
Sbjct: 324 GNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQM 383
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
++E + PN+ T LS C +D GRQ+ SM G + +VD+ +CG
Sbjct: 384 QREGVKPNEFTLASSLSGCSRIATLDSGRQLH-SMAIKAGQSGDMFVASALVDMYAKCGC 442
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
V +AE + +V + D V W ++ HG
Sbjct: 443 VEDAEVVFDGLVSR-DTVSWNTIICGYSQHG 472
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 160/333 (48%), Gaps = 6/333 (1%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN + + S +A+ L+ MR T NQ F ++ A +++ + + IH V
Sbjct: 58 WNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVC 117
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G + D+ + N V Y + + N Q F + L ++SG+ + ++
Sbjct: 118 KYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPR 177
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
+ Q+L+EGFEPN T S+L CA G L G+ +H V G + L +LV++Y
Sbjct: 178 ILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYA 237
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G+ A +F +PER++ +W A+I+G + G+ L +F ++ E PN TF+
Sbjct: 238 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFIS 296
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+L +C +D+G+Q+ + + ++ +VD+ + + +AE + R++ K
Sbjct: 297 ILRSCSSLSDVDLGKQVHAQIVK-NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI-K 354
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
D+ W ++A G E+ VK I ++
Sbjct: 355 RDLFAWTVIVAGYAQDGQ---GEKAVKCFIQMQ 384
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 2/260 (0%)
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
K+I V K+G+ D H+ + LV Y L ARQV +E+ + + W +S
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+ EA+ LF M N AS++SA A G GE +H V GFE ++
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
A V MY K ++ F +M N+A+ N ++SG ++ + +L E
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFE 188
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN TF+ +L C G ++ G+ I G + + GI P + +V++ +CG A +
Sbjct: 189 PNMYTFISILKTCASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACK 247
Query: 375 LIKRMVWKPDVVMWGALLAA 394
+ + + DVV W AL+
Sbjct: 248 VFGEIP-ERDVVSWTALITG 266
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 210/368 (57%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + R+F + + + WN L+ + D + ++ M GF PN +TF +L
Sbjct: 480 GSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISIL 539
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
++CS++ ++ KQ+H + K+ LD + V LV Y+ + L +A +F+ + R L
Sbjct: 540 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLF 599
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT +++GYAQ + +A+ F QM EG +PN TLAS LS C++ L+ G ++H
Sbjct: 600 AWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMA 659
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + +ALV MY K G + A+ +FD + R+ +WN +I G + HG +AL
Sbjct: 660 IKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKAL 719
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
F + E VP+++TF+GVLSAC H G I+ G++ F S+ ++YGI P IEHY CMVD+
Sbjct: 720 KAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDI 779
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR GK E E I+ M +V++W +L ACK HGNIE ER ++ LEP Y
Sbjct: 780 LGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNY 839
Query: 423 VVLSNMYA 430
++LSNM+A
Sbjct: 840 ILLSNMFA 847
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 170/340 (50%), Gaps = 2/340 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G A ++F I+ P+ W+ +I +A ++ MR +G PNQ T
Sbjct: 376 SKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLA 435
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
++ A +++ L + IH V K G + D V N LV Y + + +VF+ NR
Sbjct: 436 SLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR 495
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L W ++SG+ + + L +F+QML EGF PN T S+L +C+ ++LG++VH
Sbjct: 496 DLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 555
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ + +GTALV MY KN L A+ +F+ + +R++ W +++G A G E
Sbjct: 556 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 615
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+A+ F ++++E + PN+ T LS C +D GRQ+ SM G + +
Sbjct: 616 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH-SMAIKAGQSGDMFVASAL 674
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
VD+ +CG V +AE + +V + D V W ++ HG
Sbjct: 675 VDMYAKCGCVEDAEVVFDGLVSR-DTVSWNTIICGYSQHG 713
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 188/391 (48%), Gaps = 7/391 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + KQ+HA+ I D F S L+ A G++ A R+F + N WN
Sbjct: 242 CLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYA--KCGEMVLAERVFLCMPKQNAVSWN 299
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
L+ A + +K + L+ M + ++ T + VLK C+N +L + +H+ +
Sbjct: 300 ALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRI 359
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G +LD + CLV YS +A +VF I + + W+ +I+ Q ++ EA +F
Sbjct: 360 GCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVF 419
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M G PN TLAS++SA G L GE +H V GFE + ALV MY K
Sbjct: 420 KRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKI 479
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ +F++ R++ +WNA++SG + + L +F ++ E PN TF+ +L
Sbjct: 480 GSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISIL 539
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
+C +D+G+Q+ + + ++ +VD+ + + +AE + R++ K D
Sbjct: 540 RSCSSLSDVDLGKQVHAQIVK-NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI-KRD 597
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALE 415
+ W ++A G E+ VK I ++
Sbjct: 598 LFAWTVIVAGYAQDGQ---GEKAVKCFIQMQ 625
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 2/294 (0%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
++ +L+ C++ LN K IH V KSG++ D H+ N LV Y+ N A +VF EI
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R + WT +I+G+ + A+ LF +M EG E N T A+ L AC+ LE G++
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH G +G+ALV +Y K G + A+ +F MP++N +WNA+++G A G
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
AE+ L+LF ++ +I + T VL C ++G + G QI S+ G E
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG-QIVHSLAIRIGCELDEFISC 369
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
C+VD+ +CG +A ++ R + PDVV W A++ G A V K +
Sbjct: 370 CLVDMYSKCGLAGDALKVFVR-IEDPDVVSWSAIITCLDQKGQSREAAEVFKRM 422
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 186/399 (46%), Gaps = 5/399 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+++ K IH Q+I S D + L+ + G +YA ++F I + W LI
Sbjct: 144 LNEGKAIHGQVIKSGINPDSHLWNSLVN--VYAKCGSANYACKVFGEIPERDVVSWTALI 201
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ A+ L+ MRR G N+ T+ LKACS L KQ+H K G
Sbjct: 202 TGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDF 261
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
DL V + LV Y+ ++ A +VF + + W +++G+AQ A + L LF +M
Sbjct: 262 SDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRM 321
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+ TL++VL CA SG L G+ VH G E+ + LV MY+K G
Sbjct: 322 TGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLA 381
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A +F + + ++ +W+A+I+ L G + EA ++F+++ ++PN T ++SA
Sbjct: 382 GDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAA 441
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
G + G I + + YG E +V + + G V + + + + D++
Sbjct: 442 TDLGDLYYGESIHACVCK-YGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR-DLIS 499
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
W ALL+ ++ + R+ +++A E N +Y +S
Sbjct: 500 WNALLSGFHDNETCDTGLRIFNQMLA-EGFNPNMYTFIS 537
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 247/458 (53%), Gaps = 36/458 (7%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYA 68
Q L + L D C +++Q+KQIH ++ Q + ++L+ L D Y
Sbjct: 45 QRELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYP 103
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R+ +Q N F+W +IR D+AI +Y MR+ P TF+ +LKAC ++
Sbjct: 104 RRVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSM 163
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR--------- 179
LN +Q H + ++V N ++ Y + AR+VFDE+ R
Sbjct: 164 GDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELI 223
Query: 180 ----------------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
+ WT M++G+AQ+ + EAL FD+M G + V
Sbjct: 224 AAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEV 283
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMG--AILGTALVHMYTKNGALAKAKALFD 275
T+A +SACAQ G + ++ + G+ ++G+AL+ MY+K G + +A +F
Sbjct: 284 TVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFV 343
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFID 334
SM +N+ ++++MI GLA+HG A+EALDLF + + I PN +TFVG L+AC H+G +D
Sbjct: 344 SMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVD 403
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
GRQ+F SM + +G+EP +HY CMVDLLGR G++ EA ELIK M +P +WGALL A
Sbjct: 404 QGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGA 463
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
C+ H N ++AE + + LEP+ G Y++LSN+Y+ A
Sbjct: 464 CRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSA 501
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 227/404 (56%), Gaps = 33/404 (8%)
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+L YA +LF+ Q+ F++N LI+A P ++I LY + G P+ HTF F+
Sbjct: 24 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 83
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
A ++ S + +H+ +SG + D L+ Y+ L AR+VFDE+ R + V
Sbjct: 84 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 143
Query: 184 WTTMISGYAQSFRANEALMLFDQM----------LMEGF--------------------- 212
W MI+GY + A+ LFD M ++ GF
Sbjct: 144 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 203
Query: 213 -EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+PN +T+ SVL ACA G LE+G ++ + + GF + A + MY+K G + AK
Sbjct: 204 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 263
Query: 272 ALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
LF+ + +RN+ +WN+MI LA+HG +EAL LF ++ +E P+ +TFVG+L AC H
Sbjct: 264 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 323
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + G+++F SM+ V+ I PK+EHYGCM+DLLGR GK+ EA +LIK M KPD V+WG
Sbjct: 324 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 383
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
LL AC HGN+E+AE + + LEP N G V++SN+YA E
Sbjct: 384 LLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEK 427
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 123/248 (49%), Gaps = 14/248 (5%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFV 121
GD+ A LF+S+ N W T+I + + N +A+ +++ M + PN T V
Sbjct: 155 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 214
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN-RT 180
L AC+N+ L +++ + ++G +++V N + YS ++ A+++F+E+ N R
Sbjct: 215 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 274
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
L W +MI A + +EAL LF QML EG +P++VT +L AC G + G+++
Sbjct: 275 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQEL-- 332
Query: 241 FVKMRGFEMGAILGTALVH------MYTKNGALAKAKALFDSMPER-NIATWNAMISGLA 293
+ E + L H + + G L +A L +MP + + W ++ +
Sbjct: 333 ---FKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACS 389
Query: 294 SHGHAEEA 301
HG+ E A
Sbjct: 390 FHGNVEIA 397
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 237/423 (56%), Gaps = 8/423 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
+IH+ ++ + D F + LL+ + D A ++F+ I N W +I S
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFD--DALKVFDDIPDKNVVSWTAIITGYIS 192
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
S + +AI + + G P+ + VL AC+ + + I ++S SG+ ++ V
Sbjct: 193 SGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFV 252
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
L+ Y +L A +F + + + W+TMI GYA + +AL LF QM E
Sbjct: 253 ATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ T+ VLSACA G L+LG + F +LGTAL+ MY+K G++ +A
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWE 372
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F +M ++ WNAM+ GL+ +GHA+ LF +EK I P++ TF+G+L C H GF
Sbjct: 373 IFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGF 432
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ GRQ F +MKRV+ + P IEHYGCMVDLLGR G + EA +LI M KP+ V+WGALL
Sbjct: 433 VNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALL 492
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLEILLVQV 446
CK H + +AE+V+K++I LEP N G YV LSN+Y+ EAE ++ ++ +Q
Sbjct: 493 GGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQK 552
Query: 447 LFA 449
+ A
Sbjct: 553 IRA 555
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 219/398 (55%), Gaps = 9/398 (2%)
Query: 8 LRQPPLPIPPLSL-----LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
L P P+ +L L++ +QLK IHA+++ QD++ + +L CAL
Sbjct: 4 LTSPTSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILC-CALDF- 61
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G +Y+ +F+ ++ PN F+WNT+IR S D AI LY +MR GF PN T FVL
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC+ + +IH+ + K+G D D+ V L+ Y + ++A +VFD+I ++ +
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT +I+GY S EA+ F ++L G +P+S +L VL+ACA+ G GE + ++
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + T+L+ MY K G L +A +F +MPE++I +W+ MI G A +G ++AL
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
DLF +++ E + P+ T VGVLSAC G +D+G M R + + ++D+
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA-LIDM 360
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+CG V +A E+ M + D V+W A++ +G+
Sbjct: 361 YSKCGSVTQAWEIFTAMK-RKDRVVWNAMMVGLSMNGH 397
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/406 (37%), Positives = 229/406 (56%), Gaps = 33/406 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ +G + A LF + + W T+I +A+ +Y M R+G A N+
Sbjct: 478 AKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVV 537
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLD------------------LDLHVV-------- 153
++ AC + ++ Q+H V K G D +DL +
Sbjct: 538 NLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKD 597
Query: 154 -----NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
N LV + + ++ AR++FD++ R + W+TMISGYAQ+ ++ AL LF +M+
Sbjct: 598 HLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMV 657
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G +PN VT+ SV SA A G L+ G H ++ + L AL+ MY K G++
Sbjct: 658 ASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSIN 717
Query: 269 KAKALFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A F+ + ++ +++ WNA+I GLASHGHA LD+F +++ I PN ITF+GVLSA
Sbjct: 718 SALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSA 777
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCHAG ++ GR+IF MK Y +EP I+HYGCMVDLLGR G + EAEE+I+ M K D+V
Sbjct: 778 CCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIV 837
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG LLAAC+ HG++ + ER + + L P++ G V+LSN+YA+A
Sbjct: 838 IWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADA 883
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 126/564 (22%), Positives = 222/564 (39%), Gaps = 113/564 (20%)
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
C + +G L A +LF+ + + T+I + +A+ ++ +MR G PN
Sbjct: 343 CGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDL 402
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T V+ ACS+ + C+ IH K ++ + V L+R Y + S + AR++FD +
Sbjct: 403 TLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRM 462
Query: 177 RNRTLNVWTTMISGYAQSF-------------------------------RANEALMLFD 205
L W M++GYA++ R +EAL+++
Sbjct: 463 PEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYR 522
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
ML G N + + +++SAC + + G ++H V +GF+ + T ++H Y G
Sbjct: 523 AMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACG 582
Query: 266 ALAKAKALFDSMPERNIATWNA-------------------------------MISGLAS 294
+ A F+ + ++ +WNA MISG A
Sbjct: 583 MMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQ 642
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR----------------- 337
+ AL+LF K+ I PN++T V V SA G + GR
Sbjct: 643 TDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNL 702
Query: 338 ------------------QIFGSMK-RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
Q F ++ + + + P C + G L+ ++R
Sbjct: 703 RAALIDMYAKCGSINSALQFFNQIRDKTFSVSP-WNAIICGLASHGHASMCLDVFSDMQR 761
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAE---RVVKEIIALEPN--NHGVYVVL---SNMYA 430
KP+ + + +L+AC + G +E R++K +EP+ ++G V L + +
Sbjct: 762 YNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLE 821
Query: 431 EAE----SMKMQLEILLVQVLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNT 486
EAE SM M+ +I++ L A + D+ L P+ VLL+
Sbjct: 822 EAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYA 881
Query: 487 IPG-WTFEGTVQYVTASQTI-RLP 508
G W V+ +Q + R+P
Sbjct: 882 DAGRWEDVSLVRRAIQNQRMERMP 905
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N +V Y+ + L+NAR++FD + ++ +TTMI G Q+ EAL +F M +G
Sbjct: 339 NIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVV 398
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL-GTALVHMYTKNGALAKAKA 272
PN +TL +V+ AC+ G + +H + ++ F G +L T L+ Y + +A+
Sbjct: 399 PNDLTLVNVIYACSHFGEILNCRMIHA-IAIKLFVEGLVLVSTNLMRAYCLCSGVGEARR 457
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
LFD MPE N+ +WN M++G A G + A +LF ++ + ++
Sbjct: 458 LFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVI 499
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 46/281 (16%)
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA---------- 266
+ L S L C+ S G ++H V G + +L++MY K G+
Sbjct: 273 LALVSALKYCSSS---SQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDA 329
Query: 267 ---------------------LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
L A+ LFD MP++ ++ MI GL + EAL++F
Sbjct: 330 CPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVF 389
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
+ + + +VPND+T V V+ AC H G I R I +++ +E + ++
Sbjct: 390 KDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLF-VEGLVLVSTNLMRAYCL 448
Query: 366 CGKVLEAEELIKRMVWKPDV--VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
C V EA L RM P+V V W +L G +++A + + + + + G +
Sbjct: 449 CSGVGEARRLFDRM---PEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMI 505
Query: 424 ---VLSNMYAEAESM---KMQLEILLVQVLFAGLASAADIL 458
+L N EA M ++ + L ++L L SA L
Sbjct: 506 DGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRL 546
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 231/406 (56%), Gaps = 3/406 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH I D FA L A G L A +F I+ P+ WN +I A
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYA--KCGFLESARTVFYHIEKPDLVAWNAIIAGFA 378
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S N ++ + MR TG PN T +L ACS LN Q+H+++ K G +LD+
Sbjct: 379 SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP 438
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ YS S+LN+A QVF++I N+ V W T+++ Q +A E L L M
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
+P+ VTL +VL + Q E+G ++H F+ G + + AL++MYTK G+L A
Sbjct: 499 RIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECA 558
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ +FDS+ +I +W+++I G A G +EA +LFR + + PN+ITFVG+L+AC H
Sbjct: 559 RKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHI 618
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G ++ G +++ +M+ Y I P EH CMVDLL R G + AE+ IK+M + PDVV+W
Sbjct: 619 GMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKT 678
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
LLAACK HGN+EV +R + ++ ++P+N V+L N++A + K
Sbjct: 679 LLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWK 724
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 208/431 (48%), Gaps = 16/431 (3%)
Query: 4 KCSSLRQPPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALS 60
KCSS PL + L + C S+ L ++IH M+ + D + +L+
Sbjct: 90 KCSS---SPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSM--YG 144
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
G L A +F+S+ N W ++I + D AI LY+ M R+G P+ TF
Sbjct: 145 KCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGS 204
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
++K+CS + +Q+H HV KS DL N L+ Y+ S + +A VF I +
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD 264
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVH 239
L W +MI+G++Q EAL F +ML + ++PN S SAC++ + G ++H
Sbjct: 265 LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIH 324
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
G G +L MY K G L A+ +F + + ++ WNA+I+G AS +A+
Sbjct: 325 GLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAK 384
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
E+ F ++ +VPND+T + +L AC ++ G Q+ + ++ G I +
Sbjct: 385 ESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKM-GFNLDIPVCNSL 443
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPN 417
+ + +C + +A ++ + + K D+V W LL AC R+ K + A ++P+
Sbjct: 444 LSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPD 503
Query: 418 NHGVYVVLSNM 428
+V L+N+
Sbjct: 504 ----HVTLTNV 510
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 189/414 (45%), Gaps = 13/414 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+HA ++ S D A + L++ + S D A +F+ I + W ++I
Sbjct: 219 RQLHAHVLKSEFGADLIAQNALISMYTKFSQMAD---AINVFSRIIIKDLISWGSMIAGF 275
Query: 91 ASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ +A+ + M ++ + PN+ F ACS + +C +QIH K GL D
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
L L Y+ L +AR VF I L W +I+G+A A E+ F QM
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRH 395
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
G PN VT+ S+L AC++ L G +VH ++ GF + + +L+ MY+K L
Sbjct: 396 TGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLND 455
Query: 270 AKALFDSMPER-NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A +F+ + + +I +WN +++ A E L L + + +I P+ +T VL +
Sbjct: 456 ALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
+VG QI + + G+ I ++++ +CG LE + + PD++ W
Sbjct: 516 QIASYEVGSQIHCFIMKS-GLNLDISVSNALINMYTKCGS-LECARKMFDSIGNPDIISW 573
Query: 389 GALLAACKNHGNIEVAERVVKEI--IALEPNN---HGVYVVLSNMYAEAESMKM 437
+L+ G + A + + + + ++PN G+ S++ E +K+
Sbjct: 574 SSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKL 627
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 263/465 (56%), Gaps = 43/465 (9%)
Query: 13 LPIPPLSLLADKCKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
L + PL L A C S+ +K +HA+ I + D + L+ C + G++ +
Sbjct: 94 LGVAPLVLKA--CASLSIVKHGKALHAESIKNGVDFDVMIGTSLV--CMYAKCGNVVDSR 149
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RT---------GFAPNQHTFT 119
++F+ + N WN +I + + A+ L+ M RT GFA + T T
Sbjct: 150 KVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTET 209
Query: 120 ---FVLKACSNVRSL------------NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
F S +R++ N + V + + + ++ Y
Sbjct: 210 ARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKG 269
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ AR +FD I R L W ++ISGYAQ+ + EAL F +M EGFEP+ VT+ASVLS
Sbjct: 270 NVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLS 329
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC+Q G L+ G+K+H + +G ++ + LV MY K G LA A+ +F+ M RN A
Sbjct: 330 ACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRAC 389
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN+MISG A HG ++EAL+ F ++E P++ITF+ VLSAC H GF++ G +IF M+
Sbjct: 390 WNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRME 449
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ YG+ I+HYGC++DLLGR G++ EA +LIKRM KP+ V+WGALL AC+ H ++E+A
Sbjct: 450 K-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHLDMEMA 508
Query: 405 ERVVKEIIALEPN-NHGV---YVVLSNMYA------EAESMKMQL 439
+RVV+EI+ ++ N + G YV+LSN+YA +AE M+M++
Sbjct: 509 DRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEM 553
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 176/362 (48%), Gaps = 46/362 (12%)
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGF-----APNQHTFTFVLKACSNVRSL 131
+P+ W LIR+ S P +A+ +Y +RR G AP VLKAC+++ +
Sbjct: 57 TPSLSNWCHLIRSYLSQGAPREALLVYTGLRRKGVYLLGVAP------LVLKACASLSIV 110
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
K +H K+G+D D+ + LV Y+ ++ ++R+VFD + R W MI GY
Sbjct: 111 KHGKALHAESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGY 170
Query: 192 AQSFRANEALMLFDQM----------LMEGFE-------------------PNSVTLASV 222
+ + A++LF++M +++GF N VT +
Sbjct: 171 LGNGDSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFDDVPSELRNVVTWTVM 230
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
+ A++ +E +V + R F ++++ Y K G + +A+++FD +P RN+
Sbjct: 231 VDGYARNAEMEAAREVFEGMPQRNF----FAWSSMISGYCKKGNVKEARSIFDRIPVRNL 286
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
WN++ISG A +G +EEAL+ F K++ E P+++T VLSAC G +D G++I
Sbjct: 287 VNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHM 346
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M GI+ +VD+ +CG + A + + M + + W ++++ HG +
Sbjct: 347 MNH-KGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHR-NRACWNSMISGFAIHGQSK 404
Query: 403 VA 404
A
Sbjct: 405 EA 406
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 9/232 (3%)
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+L+ W +I Y EAL+++ + +G V VL ACA ++ G+ +H
Sbjct: 59 SLSNWCHLIRSYLSQGAPREALLVYTGLRRKGVYLLGVA-PLVLKACASLSIVKHGKALH 117
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
G + ++GT+LV MY K G + ++ +FD MPERN TWNAMI G +G ++
Sbjct: 118 AESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSK 177
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
A+ LF K+ + +T++ ++ +G + R+ F + + + M
Sbjct: 178 SAVLLFEKMS----IRTAVTWIEMIDGFARSGDTETARRFFDDVPSEL---RNVVTWTVM 230
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
VD R ++ A E+ + M + + W ++++ GN++ A + I
Sbjct: 231 VDGYARNAEMEAAREVFEGMPQR-NFFAWSSMISGYCKKGNVKEARSIFDRI 281
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 215/368 (58%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
LS A +F+ ++ + WN +I A + N ++ + L+ +M R P+Q T+ VLKA
Sbjct: 429 LSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKA 488
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
CS+ ++LN +IH + KSGL LD V L+ Y + A+++ D I +T+ W
Sbjct: 489 CSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSW 548
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+I+G+ + +A F +ML +P++ T A VL ACA + LG+++H +
Sbjct: 549 NAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIK 608
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
+ + LV MY+K G + + +F+ P ++ TWNAMI G A HG EEAL
Sbjct: 609 LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGY 668
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +++ E + PN TFV +L AC H GFID G F +M YG+EP+IEHY CM+D++G
Sbjct: 669 FERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIG 728
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R G++ EA +LI+ M ++ D V+W LL+ CK HGNIE+AE+ I+ LEP + ++
Sbjct: 729 RSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACIL 788
Query: 425 LSNMYAEA 432
LSN+YA+A
Sbjct: 789 LSNIYADA 796
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 183/370 (49%), Gaps = 13/370 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
+ G L+ A R+FNS+ P H + +N +I + +A+ + + ++G N+ +
Sbjct: 323 AKCGSLADAQRIFNSL--PKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ AC++++ +Q+H+ KS L ++ V N ++ Y L+ A +FDE+
Sbjct: 381 LSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME 440
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R W +I+ + Q+ E L LF ML EP+ T SVL AC+ L G +
Sbjct: 441 RRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGME 500
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H + G + + +G AL+ MY K G + +AK + D + ++ + +WNA+I+G H
Sbjct: 501 IHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKH 560
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+E+A F ++ K + P++ T+ VL AC + + +G+QI G + ++ + +
Sbjct: 561 SEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKL-ELHSDVYITS 619
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA----ERVVKEIIA 413
+VD+ +CG ++ L+ D V W A++ HG E A ER+ E +
Sbjct: 620 TLVDMYSKCGN-MQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENV- 677
Query: 414 LEPNNHGVYV 423
P NH +V
Sbjct: 678 -RP-NHATFV 685
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 202/429 (47%), Gaps = 45/429 (10%)
Query: 12 PLPIPPLSLLADKCKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
P I S + +C + LK Q HA+MI+S I D + ++ L+ S L+YA
Sbjct: 40 PTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSH--LNYA 97
Query: 69 TRLFNSIQSPNHFMWNTLIR--AQASSLN---------PD-------------------- 97
++F + + +NT+I A A +N P
Sbjct: 98 YKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECR 157
Query: 98 KAIFLYMNMRRT---GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
K+I ++++M R+ GF +Q TF VLKACS + Q+H + + G D+ +
Sbjct: 158 KSIDVFLDMGRSEEVGF--DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGS 215
Query: 155 CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
L+ Y+ L+++ ++F EI + W+ +I+G Q+ L LF +M G
Sbjct: 216 ALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGV 275
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
+ ASV +CA L++G ++H F +GTA + MY K G+LA A+ +F
Sbjct: 276 SQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIF 335
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH-AGFI 333
+S+P+ ++ +NA+I G + EAL F+ L K + N+I+ G SAC G +
Sbjct: 336 NSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDL 395
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
D GRQ+ S+ + I ++D+ G+C + EA + M + D V W A++A
Sbjct: 396 D-GRQLH-SLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEME-RRDAVSWNAVIA 452
Query: 394 ACKNHGNIE 402
A + +GN E
Sbjct: 453 AHEQNGNEE 461
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 36/325 (11%)
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
+ +T TF+ +++ CS+ SL KQ H + SG D+++ NCL++ Y
Sbjct: 32 LQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRC 91
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGFE 213
S LN A +VF+++ R + + TMISGYA + N A F ++ GF
Sbjct: 92 SHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFL 151
Query: 214 PN----------------------SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
N T A VL AC+ LG +VH + GF
Sbjct: 152 QNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDV 211
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+ G+AL+ MY K L + +F +P +N W+A+I+G + L+LF++++K
Sbjct: 212 VTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKV 271
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
I + + V +C + VG Q+ ++K +G + + +D+ +CG +
Sbjct: 272 GIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVG--TATLDMYAKCGSLA 329
Query: 371 EAEELIKRMVWKPDVVMWGALLAAC 395
+A+ + + K + + A++ C
Sbjct: 330 DAQRIFNSLP-KHSLQCYNAIIVGC 353
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 244/412 (59%), Gaps = 16/412 (3%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATR-LFNSIQS---PNH--FMWNT 85
QIH+ ++ ++ H L F A SS + + YA+ LF + Q+ P+H F++NT
Sbjct: 140 QIHSLIL---KLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNT 196
Query: 86 LIRAQASSLNPD-KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
LIRA A + + A+ Y MRR +PN+ TF FVLKAC+ + L +H + K
Sbjct: 197 LIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKF 256
Query: 145 GLDLDLHVVNCLVRCYSV-----SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
G + D HV N LV Y SS +A++VFDE + W+ MI GYA++ +
Sbjct: 257 GFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSAR 316
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
A+ LF +M + G P+ +T+ SVLSACA G LELG+ + +++ + L AL+
Sbjct: 317 AVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALID 376
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
M+ K G + +A +F M R I +W +MI GLA HG EA+ +F ++ ++ + P+D+
Sbjct: 377 MFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVA 436
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+GVLSAC H+G +D G F +M+ ++ I PKIEHYGCMVD+L R G+V EA E ++ M
Sbjct: 437 FIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAM 496
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+P+ V+W +++ AC G +++ E V KE+I EP++ YV+LSN+YA+
Sbjct: 497 PVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAK 548
>gi|297737392|emb|CBI26593.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 234/439 (53%), Gaps = 34/439 (7%)
Query: 5 CSSLRQPPLPIPPL------------SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASR 52
CSSL Q L P LL+++ S+ L Q HA +I S + F AS+
Sbjct: 13 CSSLLQQRLYCSPTWSHEPNDFNYLNHLLSNQISSLKTLLQSHAFIITSGYSNNIFIASK 72
Query: 53 LLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
L++ A S S +T LF+ I + F+WN++I+A S+ +A+ Y MR +
Sbjct: 73 LISLYA--SFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEAL 130
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQ 171
PN T ++ +C+ + +N + IH VSK GL + V N L+ Y L A +
Sbjct: 131 PNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGNQMVQNALLSMYCKFGFLKLAEK 190
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
F + + W M S E +PNS TL SVLSAC+
Sbjct: 191 FFGRVNEQNFEAWNLMFS------------------FCEDLKPNSATLVSVLSACSHLAS 232
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LE GEKVH ++ FE + TAL+ MY K G L K++ +F+SM ER++ TWN MISG
Sbjct: 233 LEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISG 292
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
HG A A++ F+++E+ PN +TF+ VLSAC HAG + G+ +FG M+ Y + P
Sbjct: 293 YGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQD-YSVAP 351
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++HY CMVDLLGR G + EAE L+ M PD +WGALL++CK H IE+ R+ K
Sbjct: 352 NLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHA 411
Query: 412 IALEPNNHGVYVVLSNMYA 430
I + N G YV++SNMY+
Sbjct: 412 IDSDVENDGYYVMISNMYS 430
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/406 (39%), Positives = 228/406 (56%), Gaps = 3/406 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
LKQ HA++++S ++L ++G SYA L S SP+ F++ +L RA
Sbjct: 26 LKQAHARLVVSGHAHSLPLTTKLAT--LAVAAGAASYAGLLAASHPSPDSFLFCSLTRAA 83
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A P A+ Y + + FT V KAC+++ +L +H H G D
Sbjct: 84 ARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGMGVHAHAVLLGFGSDR 143
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V LV YS L+ AR++FD IR+R++ W MISGY Q+ A A+ ++ +M +
Sbjct: 144 FVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGLAGRAIEVYREMRVA 203
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G P+S T + LSACAQ+G L+LG +V + EM +LG ALV+MY + G + KA
Sbjct: 204 GEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYARCGLVNKA 263
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ FD + ERN+ TW +MI+G HGH EA+ LF + ++ PND+TFV VLSAC HA
Sbjct: 264 REWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVLSACAHA 323
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV-WKPDVVMWG 389
G + GR F SMK VYG+ P+ EHY MVD+ GR G + +A + I + +P +W
Sbjct: 324 GLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIHDSIPGEPGPEVWT 383
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
A+L ACK H N + V + +IALEP N V+LSN+YA + M
Sbjct: 384 AMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGKM 429
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 246/450 (54%), Gaps = 34/450 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P ++LL D + +++QIHA++ + ++D + ALS L YA ++ +
Sbjct: 8 PAIALL-DSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRS 66
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNC 133
+ P F N++IRA S P+K+ Y + +G P+ +T F+++AC+ +R
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 134 CKQIHTHVSKSGLDLDLHV----------VNCLVRCYSV--------------------- 162
Q+H + G D D HV + CL C+ V
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
D+ AR++F+ + R W MISGYAQ + EAL +F M +EG + N V + SV
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSAC Q G L+ G H +++ ++ L T LV +Y K G + KA +F M E+N+
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TW++ ++GLA +G E+ L+LF ++++ + PN +TFV VL C GF+D G++ F S
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+ +GIEP++EHYGC+VDL R G++ +A +I++M KP +W +LL A + + N+E
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ K+++ LE NHG YV+LSN+YA++
Sbjct: 427 LGVLASKKMLELETANHGAYVLLSNIYADS 456
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 242/456 (53%), Gaps = 24/456 (5%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQL------KQIHAQMIISSRIQDHFAASRLLAFCAL 59
SSLR+ L IP S KS L + H Q + D F +S L+
Sbjct: 2004 SSLRKLGL-IPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDM--Y 2060
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR--------TGF 111
S G L A LF+ I N W ++I + D A+ L+ +
Sbjct: 2061 SKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNV 2120
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
+ VL ACS V + +H V K G D + V N L+ Y+ +++
Sbjct: 2121 PLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKK 2180
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSG 230
VFD + + W +MI+ YAQS + EAL +F M+ G N+VTL++VL ACA +G
Sbjct: 2181 VFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAG 2240
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
L G+ +H V E +GT+++ MY K G + AK FD M E+N+ +W AM++
Sbjct: 2241 ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVA 2300
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
G HG A+EALD+F K+ + + PN ITFV VL+AC HAG ++ G F +MK Y IE
Sbjct: 2301 GYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIE 2360
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P IEHYGCMVDL GR G + EA LIKRM KPD V+WG+LL AC+ H N+++ E ++
Sbjct: 2361 PGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQK 2420
Query: 411 IIALEPNNHGVYVVLSNMYAEA------ESMKMQLE 440
+ L+P+N G YV+LSN+YA+A E M+M ++
Sbjct: 2421 LFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 2456
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 208/384 (54%), Gaps = 33/384 (8%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
L CK+ L+QIHA++I S D +L+ S+ G ++YA LF IQ+P
Sbjct: 32 FLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHL--YSTHGRIAYAILLFYQIQNPC 89
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F WN +IRA + ++A+ LY NM G A ++ TF FV+KAC+N S++ K +H
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 140 HVSKSGLDLDLHVVNCLV-------------------RCYSVSS------------DLNN 168
+ K G D+ V N L+ R +V S DL
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
AR++FDEI ++ + WT MI+GY ++ + EAL LF +M E PN T+ S++ AC +
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G L LG +H + E+G LGTAL+ MY+K G++ A +F++MP +++ TWN+M
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
I+ L HG +EAL+LF ++E+ + P+ ITF+GVL AC H + G F M + YG
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYG 389
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEA 372
I P EHY CM +L R + EA
Sbjct: 390 IAPIPEHYECMTELYARSNNLDEA 413
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 188/365 (51%), Gaps = 21/365 (5%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
AT + + N WN++I A + +A+ + ++R+ G P + +F +K+CS
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ L + H G + DL V + L+ YS L +AR +FDEI R + WT+M
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 2087
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEP--------NSVTLASVLSACAQSGCLELGEKVH 239
I+GY Q+ +A+ AL+LF L E E +SV + SVLSAC++ + E VH
Sbjct: 2088 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 2147
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
FV +GF+ +G L+ Y K G +K +FD M E++ +WN+MI+ A G +
Sbjct: 2148 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 2207
Query: 300 EALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EAL++F + + + N +T VL AC HAG + G+ I + I+ +E+ C
Sbjct: 2208 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYNVC 2262
Query: 359 ----MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-- 412
++D+ +CG+V A++ RM K +V W A++A HG + A + +++
Sbjct: 2263 VGTSIIDMYCKCGRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 2321
Query: 413 ALEPN 417
++PN
Sbjct: 2322 GVKPN 2326
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 151/352 (42%), Gaps = 77/352 (21%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
F+L+ C N + L +QIH + +SGL D + L+ YS + A +F +I+N
Sbjct: 32 FLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W +I + + +ALML+ M+ +G + T V+ AC ++LG+ VH
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNG-------------------------------ALA 268
+ GF + L+ Y K G L
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+A+ +FD +P +N+ +W AMI+G + EEAL+LF++++ E I PN+ T V ++ AC
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIE---HYG-CMVDLLGRCGKVLEAEELIKRM----- 379
G + +GR I Y I+ IE + G ++D+ +CG + +A E+ + M
Sbjct: 269 EMGILTLGRGIHD-----YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323
Query: 380 -VW----------------------------KPDVVMWGALLAACKNHGNIE 402
W KPD + + +L AC + N++
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVK 375
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 10/241 (4%)
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
N A + + ++ W ++I+ A+ + EAL F + G P + + +C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+ L G H + GFE + +AL+ MY+K G L A+ALFD +P RN+ +W
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQI-------VPND-ITFVGVLSACCHAGFIDVGRQ 338
+MI+G + A+ AL LF+ +E+ VP D + V VLSAC +
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ G + + G + I ++D +CG+ L ++++ M K D + W +++A
Sbjct: 2146 VHGFVVK-KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDD-ISWNSMIAVYAQS 2203
Query: 399 G 399
G
Sbjct: 2204 G 2204
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/451 (36%), Positives = 247/451 (54%), Gaps = 28/451 (6%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL + CK + Q+HA++ I++ A +RLL + ++S +++YA +FN ++
Sbjct: 29 LSLL-EICKFTTEFAQLHARLTKLGFIKNPLALTRLLCYSSISQYANINYAQSIFNFDKN 87
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
PN F +N +IR A P+ A+ L+ +M N+ TF FVLKACS VR++ KQ
Sbjct: 88 PNTFAYNVMIRGYAQREKPENALSLFYSMLCNANSGQNKLTFPFVLKACSQVRAIEEGKQ 147
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H V K GL DL V N L+ YS + A QVF++I + + W +MISG
Sbjct: 148 VHGLVFKHGLSEDLFVQNSLISMYSSCGLIGFACQVFNKIDDPDVVSWNSMISGLVDLGF 207
Query: 197 ANEALMLFDQM--------------------LMEG---FEPNSVTLASVLSACAQSGCLE 233
E +FD+M LME F+ T+ SVL+AC+ G LE
Sbjct: 208 VEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELFDQMRFTMVSVLTACSYLGALE 267
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
GE + ++ G ++ ++LGTALV M+ K G++ +A ++F S+ ER++ WN++I LA
Sbjct: 268 QGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALSVFKSIEERDVGAWNSIIHKLA 327
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+HGH +EA +F + + + + I F+G+LS C H G +D G++ F M YG+ PK+
Sbjct: 328 AHGHGQEAFAIFSDMLRSNTLLDGIIFLGLLSVCRHLGLVDEGKRFFQLMSEEYGLVPKV 387
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKR---MVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
EHYGCMVDLL + EA +LI K V MWGALL NI + E K
Sbjct: 388 EHYGCMVDLLCHADLLEEARDLIDSSHASQMKSSVPMWGALLGVSCQLKNIVMGEYAAKH 447
Query: 411 IIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
++ L+P + Y VLSN+Y+ A + +E+
Sbjct: 448 LLQLDPFDGNCYTVLSNLYSAAGLYEKAIEV 478
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 204/326 (62%), Gaps = 3/326 (0%)
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
R G A + H +++A + S+ +++ + S D+ N ++ Y S DL
Sbjct: 103 RAGHAADPHASASLVQAYCSCGSVASARRVFDETAASA---DVVSWNVMIDGYVKSGDLA 159
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
AR++FD + R + WT +I YAQ + EA+ +F +M +EG EP+ V L SVLSAC
Sbjct: 160 RARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACG 219
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
G ++LGE VH FV RG L A++ MY K G++ KA +F+ M +++I TW
Sbjct: 220 DLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTT 279
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
MI+G A HG EA++LFR++EKE + PNDITF+ VLS C H G D+GR F +M Y
Sbjct: 280 MIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQY 339
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
I+P++EHYGCM+DLLGR G ++EA LI+ M +K + +WGALLAA + HG+ E+ E+
Sbjct: 340 KIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQA 399
Query: 408 VKEIIALEPNNHGVYVVLSNMYAEAE 433
+ +I LEP+N G Y++LSN+YAE E
Sbjct: 400 LLHLIELEPHNSGNYILLSNIYAEQE 425
>gi|334185681|ref|NP_189505.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g28640
gi|9294278|dbj|BAB02180.1| unnamed protein product [Arabidopsis thaliana]
gi|332643948|gb|AEE77469.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 247/424 (58%), Gaps = 12/424 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSS-SGDLSYATRLFNSI 75
L L + +C ++ Q+K H+ II ++ +A S+LL AF L + + YA+ +F+SI
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 76 QSPNHFMWNTLIRAQASSLNPD---KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+ PN F+++T+IR + S P + L + AP+ TF F++ AC +
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 133 CCKQIHTHVSKSGLDL-DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
KQIH V K+G+ L D HV ++R Y L +AR+VFDEI + W +++GY
Sbjct: 134 VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMG 250
+ +E L +F +ML++G EP+ ++ + L+ACAQ G L G+ +H FVK + + E
Sbjct: 194 VRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESD 253
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+GTALV MY K G + A +F + RN+ +W A+I G A++G+A++A+ +LE+
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLER 313
Query: 311 EQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E I P+ + +GVL+AC H GF++ GR + +M+ Y I PK EHY C+VDL+ R G++
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRL 373
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN----HGVYVVL 425
+A LI++M KP +WGALL C+ H N+E+ E VK ++ LE N V L
Sbjct: 374 DDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
Query: 426 SNMY 429
SN+Y
Sbjct: 434 SNIY 437
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 249/450 (55%), Gaps = 34/450 (7%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA------------- 58
PL +L A C Q +Q+H ++ + D F + L+ F A
Sbjct: 74 PLVFKSCALTASSC----QGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFD 129
Query: 59 ----------------LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFL 102
S +GD+ A RLF+ ++ WN++I A +A+ L
Sbjct: 130 EMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALAL 189
Query: 103 YMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV 162
+ M G PN T T V C+ L+ K++ + + L ++ V L+ Y
Sbjct: 190 FDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVK 248
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+++AR+ FD + R + W+TMI+GYAQ+ R E+L LF++M PN VTL V
Sbjct: 249 CRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGV 308
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
+SACAQ G EL E++ + + + + + LG+AL+ MYT+ G + +A+++F M ++ +
Sbjct: 309 ISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGV 368
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TWN+MI GLA +G AE+A+ L+ K+ + + PN+ITFV +L+AC HAG +D G F
Sbjct: 369 ITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEE 428
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
MKR + + P++EH C+VDLL + G + EA + I M +P+ V+W LL++C+ H ++E
Sbjct: 429 MKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVE 488
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+A+ ++++A+EP+N +YV+LSN+YA+A
Sbjct: 489 LAKLASRKLLAMEPDNSSIYVLLSNIYADA 518
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 190/387 (49%), Gaps = 42/387 (10%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF+++ P + +T + + + + + + + +M R G V K+C+
Sbjct: 23 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 82
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHV-------------------------------VNCL 156
S +Q+H H GL D+ V +NCL
Sbjct: 83 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCL 142
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ YS + D++ AR++FD + RT W +MI+ YA EAL LFD+ML EG PN+
Sbjct: 143 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNA 202
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+T+ SV S CA+SG L+ G++V + + I+ TAL+ MY K A+ A+ FD
Sbjct: 203 ITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDARREFDR 261
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
M +R++ W+ MI+G A +G E+L+LF +++ PN++T VGV+SAC G ++
Sbjct: 262 MSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELV 321
Query: 337 RQI--FGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
QI + +R+ P + G ++D+ RCG V A + RM K V+ W +++
Sbjct: 322 EQIGNYAENQRL----PLTSYLGSALIDMYTRCGHVGRARSVFSRMEQK-GVITWNSMIR 376
Query: 394 ACKNHGNIEVAERVVKEII--ALEPNN 418
+G E A + +++ ++PN
Sbjct: 377 GLAMNGFAEDAISLYEKMAENGVQPNE 403
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 228/403 (56%), Gaps = 2/403 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+H K IHAQ I + + + L + D Y RLF + +P+ W LI
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPD--YVMRLFGKMSTPDVVSWTNLI 325
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ ++A+ + MR++ +PN++TF V+ AC+N+ +QIH H + GL
Sbjct: 326 MTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLV 385
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
L V N ++ YS L A VFD + + + W+T+IS Y Q A EA M
Sbjct: 386 DALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWM 445
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
EG +PN LASVLS C LE G++VH + G + ++ +AL+ MY+++G L
Sbjct: 446 SREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNL 505
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A +FDS+ +I +W AMI+G A HG+++EA+ LF + ++P+ +TF+G+L+AC
Sbjct: 506 QEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTAC 565
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAG +D+G + M Y I P EHYGC++DLL R G++ EAE +++ M + D V+
Sbjct: 566 NHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVV 625
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
W LL AC++HG+++ A ++++ L PN+ G ++ L+N+Y+
Sbjct: 626 WSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYS 668
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 167/386 (43%), Gaps = 6/386 (1%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H + S I F +S L+ G +F ++ + N W +I +
Sbjct: 173 LHGFSVKSGLINSVFVSSALVDM--YMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHA 230
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+ + M R+ + HTF LKA + L+ K IH K G + +VV
Sbjct: 231 GCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVV 290
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L YS + ++F ++ + WT +I Y Q AL F +M
Sbjct: 291 NTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVS 350
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN T ASV+SACA + GE++H G + +++ +Y+K G L +A +
Sbjct: 351 PNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLV 410
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
FD M ++I +W+ +IS HA+EA + + +E PN+ VLS C +
Sbjct: 411 FDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALL 470
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
+ G+Q+ + G++ + + ++ + R G + EA ++ + D+V W A++
Sbjct: 471 EPGKQVH-AYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDS-IKNNDIVSWTAMIN 528
Query: 394 ACKNHGNIEVAERVVKEI--IALEPN 417
HG + A + + I + L P+
Sbjct: 529 GYAEHGYSQEAISLFENISSVGLMPD 554
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 149/332 (44%), Gaps = 3/332 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTFV 121
G + A +FN + + W LI ++ N ++A+ L+ NM +G +Q +
Sbjct: 98 GKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVA 157
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
LKAC+ ++ + +H KSGL + V + LV Y VF+ + R +
Sbjct: 158 LKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNV 217
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
WT +I G + + + L F +M +S T A L A A+SG L G+ +H
Sbjct: 218 VSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQ 277
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+GF A + L MY+K LF M ++ +W +I G E A
Sbjct: 278 TIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERA 337
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
LD F+++ K + PN+ TF V+SAC + G QI G R+ G+ + ++
Sbjct: 338 LDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRL-GLVDALSVSNSIIT 396
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
L +CG + EA + M + D++ W +++
Sbjct: 397 LYSKCGLLQEASLVFDGMT-RKDIISWSTIIS 427
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 229/403 (56%), Gaps = 2/403 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+H K IH Q I + F + L + G Y RLF ++ P+ W TLI
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATM--YNKCGKPDYVMRLFEKMRMPDVVSWTTLI 298
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ A+ + MR++ +PN++TF V+ +C+N+ + +QIH HV + GL
Sbjct: 299 STYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLV 358
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
L V N ++ YS L +A VF I + + W+T+IS Y+Q A EA M
Sbjct: 359 NALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWM 418
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
EG +PN L+SVLS C LE G++VH + G + A++ +A++ MY+K G++
Sbjct: 419 RREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSV 478
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A +F+ M +I +W AMI+G A HG+++EA++LF K+ + P+ + F+GVL+AC
Sbjct: 479 QEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTAC 538
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAG +D+G F M VY I P EHYGC++DLL R G++ EAE +I+ M + D V+
Sbjct: 539 NHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVV 598
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
W LL AC+ HG+++ ++++ L+PN+ G ++ L+N+YA
Sbjct: 599 WSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYA 641
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 179/386 (46%), Gaps = 6/386 (1%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H + S I F +S L+ G + R+F + + N W +I +
Sbjct: 146 LHGFSVKSGLIHSVFVSSALIDM--YMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHA 203
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+ + + M R+ + HTF LKA ++ L+ K IHT K G D V+
Sbjct: 204 GYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVI 263
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L Y+ + ++F+++R + WTT+IS Y Q A+ F +M
Sbjct: 264 NTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVS 323
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN T A+V+S+CA + GE++H V G + +++ +Y+K G L A +
Sbjct: 324 PNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLV 383
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F + ++I +W+ +IS + G+A+EA D + +E PN+ VLS C +
Sbjct: 384 FHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALL 443
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
+ G+Q+ + + GI+ + + ++ + +CG V EA ++ M D++ W A++
Sbjct: 444 EQGKQVHAHLLCI-GIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKIN-DIISWTAMIN 501
Query: 394 ACKNHGNIEVAERVVKEI--IALEPN 417
HG + A + ++I + L+P+
Sbjct: 502 GYAEHGYSQEAINLFEKISSVGLKPD 527
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 177/399 (44%), Gaps = 29/399 (7%)
Query: 4 KCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
+C L Q P+ P A+ S+H + ++++++ L G
Sbjct: 34 ECRELIQQPIQEQP----AENAYSVHNMLELNSELK------------------QLVKQG 71
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTFVL 122
L A +F+ + + W TLI ++ + +A+ L+ NM G +Q + L
Sbjct: 72 QLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVAL 131
Query: 123 KACSNVRSLNCC--KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
KAC+ +N C + +H KSGL + V + L+ Y + +VF+++ R
Sbjct: 132 KACA--LGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRN 189
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ WT +I+G + E L+ F +M +S T A L A A S L G+ +H
Sbjct: 190 VVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHT 249
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+GF+ + + L MY K G LF+ M ++ +W +IS G E
Sbjct: 250 QTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEH 309
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
A++ F+++ K + PN TF V+S+C + G QI G + R+ G+ + ++
Sbjct: 310 AVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRL-GLVNALSVANSII 368
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
L +CG +L++ L+ + + D++ W +++ G
Sbjct: 369 TLYSKCG-LLKSASLVFHGITRKDIISWSTIISVYSQGG 406
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 213/329 (64%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
PB+ T VL C+ + L +I L ++ V ++ Y +++ R V
Sbjct: 4 PBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLV 63
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FD + R + W+ MI+GYAQ+ R+NEAL LF+ M +PN VTL SVLSACAQ G +
Sbjct: 64 FDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSV 123
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
E GE++ +V+ RG + +AL+ MY+K G + KA+ +FD +P+R+ TWN+MI GL
Sbjct: 124 ETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGL 183
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
A +G AE+A+ L+ ++++ ++ PN+ITFVG+L+AC HAG +++G + F SM+ + I P
Sbjct: 184 AINGFAEDAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNISPN 243
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
IEH+ C+VDL R G++++A E I RM +P+VV+WG LL+A + H N+E+AE K+++
Sbjct: 244 IEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLL 303
Query: 413 ALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
LEP+N G YV+LSN+YA A + L++
Sbjct: 304 ELEPDNSGNYVILSNIYASASRWQEALKV 332
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
EPB +TLA+VLS CA+ G LE+G ++ + I+ TA++ MY K GA+ +
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 62
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FD M R++ W+AMI+G A +G + EAL+LF ++ QI PND+T V VLSAC G
Sbjct: 63 VFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGS 122
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ G +I GS G+ + ++ + +CG +++A ++ ++ + D V W +++
Sbjct: 123 VETGERI-GSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLP-QRDNVTWNSMI 180
Query: 393 AACKNHGNIEVAERVVKEI--IALEPNN 418
+G E A + + I ++PNN
Sbjct: 181 MGLAINGFAEDAIALYNRMKEIEVKPNN 208
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 25/286 (8%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+ K + K + + MI+S+ + + + C G L +F+ + + W
Sbjct: 27 RIKKLXDNKNLGSNMIVSTAMLEMYVK------CGAVDDGRL-----VFDHMARRDVVXW 75
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+ +I A + ++A+ L+ M+ PN T VL AC+ + S+ ++I ++V
Sbjct: 76 SAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVES 135
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL +++V + L+ YS ++ ARQ+FD++ R W +MI G A + A +A+ L
Sbjct: 136 RGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIAL 195
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG-------FEMGAILGTA 256
+++M +PN++T +L+AC +G +ELG + F MR E A
Sbjct: 196 YNRMKEIEVKPNNITFVGLLTACTHAGHVELG--LEFFRSMRSDHNISPNIEHFA----C 249
Query: 257 LVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEA 301
+V ++ ++G L A M E N+ W ++S H + E A
Sbjct: 250 IVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELA 295
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/411 (39%), Positives = 234/411 (56%), Gaps = 10/411 (2%)
Query: 27 SMHQLKQIHAQMIISSR--IQDH-FAASRLLAFCALSSSGDLSYATRLFNSI-QSPNHFM 82
S+ KQ+HA+ + ++ H A LL A + L YA + + + SP+ F
Sbjct: 33 SLATAKQLHARALRAAPGVTPSHPLLAKHLLFHLAALKAPPLRYAVAVLSGLLPSPDPFS 92
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
NT++R ASS P A+ L+ RR P+ HT+ +L+AC+ + +L + +H
Sbjct: 93 LNTVLRIFASSARPRVALALH---RRHLAPPDTHTYPPLLQACARLLALRYGEGLHAEAC 149
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRANEA 200
K+GL + V N LV Y +A +VFDEI R L W ++++G+A + R NE
Sbjct: 150 KNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEV 209
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L +F +ML F P+ T+ SVL+ACA+ G L LG +VHVFV G A G AL+ +
Sbjct: 210 LTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDL 269
Query: 261 YTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
Y K G + A+ +F M R + +W ++I GLA +G +AL LF +E+E+++P +IT
Sbjct: 270 YAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEIT 329
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
VGVL AC H G +D G + F MK YGI P+IEH GCMVDLLGR G+V EA I M
Sbjct: 330 MVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTM 389
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+P+ V+W LL AC H +E+ E ++ L+P + G YV+LSN+YA
Sbjct: 390 PLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYA 440
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 233/436 (53%), Gaps = 36/436 (8%)
Query: 35 HAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSL 94
H ++ +Q F A+ LL F A S+G L + R F + N WNT+I A +
Sbjct: 137 HGVVVKLGFVQQIFVANALLHFHA--SAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAG 194
Query: 95 NPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
+A L+ MR G + T +L ACS+ +L + +H H+ SG +D + N
Sbjct: 195 EVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGN 254
Query: 155 CLVRCYSVSSDLNNARQVFD-------------------------------EIRNRTLNV 183
L+ Y DL A + FD ++ R +
Sbjct: 255 ALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVS 314
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MIS Y Q R +E L L+++M G P+ TLA VLSAC Q+G L G+ +H +V+
Sbjct: 315 WNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVR 374
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
+ G L +L+ MY + G + A LF MP +N+ +WN +I LA HG A+E +
Sbjct: 375 DNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVT 434
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
FR + + P++ITFVG+LSAC H G ++ G F +M RVY +EP++EHYGCMVDLL
Sbjct: 435 FFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLL 494
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
GR G + +A LIK M KPDVV+WGALL AC+ HGN+E+ + V+K+++ LE G++V
Sbjct: 495 GRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFV 554
Query: 424 VLSNMYAEA---ESMK 436
++ N++ E E MK
Sbjct: 555 LICNLFYETNQWEDMK 570
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 213/417 (51%), Gaps = 37/417 (8%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSS---SGDLSYATRLFNSIQ 76
L +C+S+ L QIHA +++ AS+L+A +C LS+ G L +A RLF+ I
Sbjct: 16 LLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIP 75
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
P+ FM+NTL+RA ++S P +A+ L+ + + G PN+ T FVLKAC+ VR++
Sbjct: 76 EPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALA 135
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
H V K G + V N L+ ++ + L ++R+ F E+ +R + W TMI GYAQ+
Sbjct: 136 AHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGE 195
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+EA LF +M +G + TL S+L AC+ G LE+G VH + + G + ILG A
Sbjct: 196 VSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNA 255
Query: 257 LVHMYTKNGALAKAKALFD-------------------------------SMPERNIATW 285
L+ MY K G L A FD MPERNI +W
Sbjct: 256 LLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSW 315
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
NAMIS G E LDL+ ++ I P++ T GVLSAC G + G+ I ++
Sbjct: 316 NAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRD 375
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ +P + ++D+ RCG+V A L M K +V+ W ++ A HG +
Sbjct: 376 NFN-DPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNK-NVISWNVIIGALAMHGRAQ 430
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 133/295 (45%), Gaps = 22/295 (7%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS------DLNNARQVFD 174
VL+ RS+ QIH H+ G V + L+ Y S L +AR++FD
Sbjct: 13 VLELLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFD 72
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
I ++ T++ Y+ S EAL L +L G PN TL VL AC +E
Sbjct: 73 RIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEH 132
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
H V GF + AL+H + G+L ++ F M +RN+ +WN MI G A
Sbjct: 133 ALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQ 192
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-------KRVY 347
G EA LF ++ + ++ + T V +L AC G ++VGR + M R+
Sbjct: 193 AGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRIL 252
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
G ++D+ G+CG + A M K +VV W ++L A HG+++
Sbjct: 253 G--------NALLDMYGKCGDLWMAHRCFDMMPIK-NVVTWTSMLCAQAKHGSVD 298
>gi|297820424|ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323933|gb|EFH54354.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 651
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 243/445 (54%), Gaps = 15/445 (3%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS-PNHFMW 83
C SM++L++IH+ +II+ + LL FCA+S +G LSYA LF+ S P+ W
Sbjct: 15 CNSMNKLRKIHSHVIINGLHHHPSIFNHLLRFCAVSVNGSLSYAQLLFDRFDSDPSTSAW 74
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N LIR + S +P I Y M + + P+ TF+F LKAC +R + C ++H V
Sbjct: 75 NYLIRGFSISSSPLYTILYYNRMLLSSVSRPDIFTFSFALKACERIRLIPKCLELHGSVI 134
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+SG D V LVRCYS + + A +VFDE+ R L W MIS ++ + ++A
Sbjct: 135 RSGFLADAIVSTNLVRCYSANGSVEIASKVFDEMPVRDLVSWNAMISCFSHAGLHHQAFS 194
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
++ +M EG ++ T+ ++LS+CA L +G +H E + AL+ MY
Sbjct: 195 MYSRMANEGVCVDAYTIVALLSSCAHVSALNMGVMLHRIACDIRCESSVFVCNALIDMYA 254
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G+L A +F M +R++ TWN+MI G HGH EA+ FRK+ + PN +TF+G
Sbjct: 255 KCGSLENAVGVFKGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAVTFLG 314
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+L C H G + G + F M + + P ++HYGCMVDL GR G++ +A E+I
Sbjct: 315 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLFGRAGQLEKALEMIHTSSCH 374
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
D V+W LL +CK H N+E+ E +K+++ LE N G YV+++++Y+ A +
Sbjct: 375 EDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQ------ 428
Query: 443 LVQVLFAGLASAADILQNPDFESPP 467
G AS ++++ D + P
Sbjct: 429 -------GFASMRKLIRSHDLRTIP 446
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 156/309 (50%), Gaps = 23/309 (7%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR--CYSVSSDLNNARQVFDEI-R 177
+L+ C+ S+N ++IH+HV +GL + N L+R SV+ L+ A+ +FD
Sbjct: 11 MLQGCN---SMNKLRKIHSHVIINGLHHHPSIFNHLLRFCAVSVNGSLSYAQLLFDRFDS 67
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF-EPNSVTLASVLSACAQ----SGCL 232
+ + + W +I G++ S ++ +++ML+ P+ T + L AC + CL
Sbjct: 68 DPSTSAWNYLIRGFSISSSPLYTILYYNRMLLSSVSRPDIFTFSFALKACERIRLIPKCL 127
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
EL H V GF AI+ T LV Y+ NG++ A +FD MP R++ +WNAMIS
Sbjct: 128 EL----HGSVIRSGFLADAIVSTNLVRCYSANGSVEIASKVFDEMPVRDLVSWNAMISCF 183
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
+ G +A ++ ++ E + + T V +LS+C H +++G + + I +
Sbjct: 184 SHAGLHHQAFSMYSRMANEGVCVDAYTIVALLSSCAHVSALNMGVMLH---RIACDIRCE 240
Query: 353 IEHYGC--MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
+ C ++D+ +CG + A + K M K DV+ W +++ HG+ A ++
Sbjct: 241 SSVFVCNALIDMYAKCGSLENAVGVFKGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRK 299
Query: 411 IIA--LEPN 417
++A + PN
Sbjct: 300 MVASGVRPN 308
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 219/370 (59%), Gaps = 3/370 (0%)
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
+ G A ++F+ + + W L+ A +A+ + M T PN+ T
Sbjct: 165 ACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEMDVT---PNEVTLAS 221
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VL AC N+ + K +H + +L+L V N L+ Y L+ AR+VFD + R
Sbjct: 222 VLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARD 281
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ WT MISG Q R +EAL +F+ M + G +P+ V L++VLSACA G LE G VH
Sbjct: 282 IVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHE 341
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+++ +G E +GT++V MY K G L A ++F MP +N+++WNA+I+G A HG E
Sbjct: 342 YIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGRE 401
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
ALD F ++ + PN++TF+ VL ACCH+G + GRQ+F M + Y + P +HYGCMV
Sbjct: 402 ALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMV 461
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
DLLGR G + EA ++IK M +P V W LL+AC+ HG ++ +++++ I LE + +G
Sbjct: 462 DLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNG 521
Query: 421 VYVVLSNMYA 430
+YV+LSNMYA
Sbjct: 522 IYVLLSNMYA 531
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 165/351 (47%), Gaps = 13/351 (3%)
Query: 83 WNTLIRAQASSLNPDKA-----IFLYMNMRRTGFAPNQHTFTFVLKACSNVRS-LNCCKQ 136
+N LI + + +P A + L + G P+ +T LKAC+ + L Q
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQ 139
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
H K+G + V N LV Y +AR+VFDE+ R + WT ++S + +
Sbjct: 140 AHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGM 199
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
EAL + +M PN VTLASVL AC G G+ VH + R E+ I+G A
Sbjct: 200 FMEALGVLAEM---DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNA 256
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ MY K L A+ +FD + R+I +W MISGL EAL++F ++ + P+
Sbjct: 257 LLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPD 316
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+ VLSAC G ++ GR + ++R GIE + +VD+ +CG + A +
Sbjct: 317 KVVLSTVLSACASLGALESGRWVHEYIER-KGIEWDVHVGTSVVDMYVKCGCLDTAVSIF 375
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVL 425
+ M K +V W AL+ HG A ++A L PN VL
Sbjct: 376 QEMPLK-NVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVL 425
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ-SGCLELGEKVHVFVKMRGFEMGAI 252
+FRA AL+L G P+ TL + L ACA+ G L G + H + GF
Sbjct: 96 AFRAF-ALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQAHAVAEKAGFLGRVP 154
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+ ALV Y G A+ +FD M ER++ +W A++S G EAL + +++
Sbjct: 155 VQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEMD--- 211
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSM----------------------------K 344
+ PN++T VL AC + G G+ + G +
Sbjct: 212 VTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLAR 271
Query: 345 RVYG--IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW---KPDVVMWGALLAACKNHG 399
RV+ + I + M+ L +C + EA E+ M KPD V+ +L+AC + G
Sbjct: 272 RVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLG 331
Query: 400 NIEVAERVVKEIIALEPNNHGVYVVLS--NMYAEAESMKMQLEIL 442
+E + R V E I + V+V S +MY + + + I
Sbjct: 332 ALE-SGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIF 375
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 249/450 (55%), Gaps = 34/450 (7%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA------------- 58
PL +L A C Q +Q+H ++ + D F + L+ F A
Sbjct: 123 PLVFKSCALTASSC----QGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFD 178
Query: 59 ----------------LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFL 102
S +GD+ A RLF+ ++ WN++I A +A+ L
Sbjct: 179 EMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTL 238
Query: 103 YMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV 162
+ M G PN T T V C+ L+ K++ + + L ++ V L+ Y
Sbjct: 239 FDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVK 297
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+++AR+ FD + R + W+TMI+GYAQ+ R E+L LF++M PN VTL V
Sbjct: 298 CRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGV 357
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
+SACAQ G EL E++ + + + + + LG+AL+ MYT+ G + +A+++F M ++ +
Sbjct: 358 ISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGV 417
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TWN+MI GLA +G AE+A+ L+ K+ + + PN+ITFV +L+AC HAG +D G F
Sbjct: 418 ITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEE 477
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
MKR + + P++EH C+VDLL + G + EA + I M +P+ V+W LL++C+ H ++E
Sbjct: 478 MKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVE 537
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+A+ ++++A+EP+N +YV+LSN+YA+A
Sbjct: 538 LAKLASRKLLAMEPDNSSIYVLLSNIYADA 567
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 197/408 (48%), Gaps = 46/408 (11%)
Query: 51 SRLLA---FCALSSSGDLSYATR-LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM 106
+RLL F A+ S S A R LF+++ P + +T + + + + + + + +M
Sbjct: 51 ARLLKTRPFHAIFSDATTSRAARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSM 110
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
R G V K+C+ S +Q+H H GL D+ V+ LV Y+ + D+
Sbjct: 111 HRKGAYVPSGCVPLVFKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDM 170
Query: 167 NNARQVFDE-------------------------------IRNRTLNVWTTMISGYAQSF 195
+A VFDE + RT W +MI+ YA
Sbjct: 171 ESAVSVFDEMPVKDPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGG 230
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
EAL LFD+ML EG PN++T+ SV S CA+SG L+ G++V + + I+ T
Sbjct: 231 EFREALTLFDRMLSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHT 289
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
AL+ MY K A+ A+ FD M +R++ W+ MI+G A +G E+L+LF +++ P
Sbjct: 290 ALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRP 349
Query: 316 NDITFVGVLSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEA 372
N++T VGV+SAC G ++ QI + +R+ P + G ++D+ RCG V A
Sbjct: 350 NEVTLVGVISACAQLGSDELVEQIGNYAENQRL----PLTSYLGSALIDMYTRCGHVGRA 405
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
+ RM K V+ W +++ +G E A + +++ ++PN
Sbjct: 406 RSVFSRMEQK-GVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNE 452
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 230/402 (57%), Gaps = 3/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH I D FA L A G L A +F I+ P+ WN +I A
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYA--KCGFLESARTVFYHIEKPDLVAWNAIIAGFA 378
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S N ++ + MR TG PN T +L ACS LN Q+H+++ K G +LD+
Sbjct: 379 SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP 438
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ YS S+LN+A QVF++I N+ V W T+++ Q +A E L L M
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
+P+ VTL +VL + Q E+G ++H F+ G + + AL++MYTK G+L A
Sbjct: 499 RIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECA 558
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ +FDS+ +I +W+++I G A G +EA +LFR + + PN+ITFVG+L+AC H
Sbjct: 559 RKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHI 618
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G ++ G +++ +M+ Y I P EH CMVDLL R G + AE+ I++M + PDVV+W
Sbjct: 619 GMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKT 678
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LLAACK HGN+EV +R + ++ ++P+N V+L N++A +
Sbjct: 679 LLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASS 720
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 208/431 (48%), Gaps = 16/431 (3%)
Query: 4 KCSSLRQPPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALS 60
KCSS PL + L + C S+ L ++IH M+ + D + +L+
Sbjct: 90 KCSS---SPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSM--YG 144
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
G L A +F+S+ N W ++I + D AI LY+ M R+G P+ TF
Sbjct: 145 KCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGS 204
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
++K+CS + +Q+H HV KS DL N L+ Y+ S + +A VF I +
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD 264
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVH 239
L W +MI+G++Q EAL F +ML + ++PN S SAC++ + G ++H
Sbjct: 265 LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIH 324
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
G G +L MY K G L A+ +F + + ++ WNA+I+G AS +A+
Sbjct: 325 GLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAK 384
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
E+ F ++ +VPND+T + +L AC ++ G Q+ + ++ G I +
Sbjct: 385 ESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKM-GFNLDIPVCNSL 443
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPN 417
+ + +C + +A ++ + + K D+V W LL AC R+ K + A ++P+
Sbjct: 444 LSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPD 503
Query: 418 NHGVYVVLSNM 428
+V L+N+
Sbjct: 504 ----HVTLTNV 510
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 189/414 (45%), Gaps = 13/414 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+HA ++ S D A + L++ + S D A +F+ I + W ++I
Sbjct: 219 RQLHAHVLKSEFGADLIAQNALISMYTKFSQMAD---AINVFSRIIIKDLISWGSMIAGF 275
Query: 91 ASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ +A+ + M ++ + PN+ F ACS + +C +QIH K GL D
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
L L Y+ L +AR VF I L W +I+G+A A E+ F QM
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRH 395
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
G PN VT+ S+L AC++ L G +VH ++ GF + + +L+ MY+K L
Sbjct: 396 TGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLND 455
Query: 270 AKALFDSMPER-NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A +F+ + + +I +WN +++ A E L L + + +I P+ +T VL +
Sbjct: 456 ALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
+VG QI + + G+ I ++++ +CG LE + + PD++ W
Sbjct: 516 QIASYEVGSQIHCFIMKS-GLNLDISVSNALINMYTKCGS-LECARKMFDSIGNPDIISW 573
Query: 389 GALLAACKNHGNIEVAERVVKEI--IALEPNN---HGVYVVLSNMYAEAESMKM 437
+L+ G + A + + + + ++PN G+ S++ E +K+
Sbjct: 574 SSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKL 627
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 272/516 (52%), Gaps = 31/516 (6%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P I S L D ++ KQ H Q ++ D F +S L+ S G LS A L
Sbjct: 86 PCAIKSCSALFD----LNSGKQAHQQALVFGFESDLFVSSALIDM--YSKCGKLSNARVL 139
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM---------NMRRTGFAPNQHTFTFVL 122
F+ I N W +LI + + +A+ ++ N G + + VL
Sbjct: 140 FDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVL 199
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
ACS V + + +H K GLD + V N L+ Y+ +++ +R+VFD++ + +
Sbjct: 200 SACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVV 259
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGF-EPNSVTLASVLSACAQSGCLELGEKVHVF 241
W +MI+ YAQ+ + +A +F ML G + N VTL+++L ACA G L +G +H
Sbjct: 260 SWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQ 319
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
V G+ I+ T+++ MY K G A+ FD M E+N+ +W AMI+G HG A EA
Sbjct: 320 VIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREA 379
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
LD+F ++ + PN ITF+ VL+AC HAGF++ G + F +M Y +EP +EHYGCMVD
Sbjct: 380 LDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVD 439
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LLGR G + EA LIK M + D V+WG+LLAAC+ H ++E+AE +E+ L+P+N G
Sbjct: 440 LLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGY 499
Query: 422 YVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLL 481
YV+L+N+YA+A K +E + + V GL + P +L + V L
Sbjct: 500 YVLLANIYADAGRWK-DVERMRILVKDRGLV-----------KPPGYSLVELKGRVHVFL 547
Query: 482 NGNNTIPGWTFEGTVQYVTASQTIRLPDNGHAIQLA 517
G+ P E +Y+ +++L + G+ +A
Sbjct: 548 VGDKEHP--QHEKIYKYLE-ELSVKLQEAGYVPNMA 580
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 212/474 (44%), Gaps = 66/474 (13%)
Query: 69 TRLFNS-IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
T LFN + + WN+LI A + +++ + MR+ PN+ TF +K+CS
Sbjct: 35 TTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSA 94
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ LN KQ H G + DL V + L+ YS L+NAR +FDEI R + WT++
Sbjct: 95 LFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSL 154
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPN---------SVTLASVLSACAQSGCLELGEKV 238
I+GY Q+ A+EALM+F + L E E N SV + SVLSAC++ + E V
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGV 214
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H G + + L+ Y K G ++ ++ +FD M E+++ +WN+MI+ A +G +
Sbjct: 215 HGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLS 274
Query: 299 EEALDLFRKLEKEQIVP-NDITFVGVLSACCHAGFIDVG--------------------- 336
+A ++F + K N++T +L AC H G + VG
Sbjct: 275 TDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS 334
Query: 337 --------------RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW- 381
R F MK E + + M+ G G EA ++ +M+W
Sbjct: 335 IIDMYCKCGQAEMARNAFDGMK-----EKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA 389
Query: 382 --KPDVVMWGALLAACKNHGNIEVAER---VVKEIIALEP--NNHGVYVVL-------SN 427
KP+ + + ++LAAC + G +E R + +EP ++G V L
Sbjct: 390 GVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKE 449
Query: 428 MYAEAESMKMQLEILLVQVLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLL 481
Y +SMK++ + +L L A D+ L P+ +VLL
Sbjct: 450 AYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLL 503
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 231/401 (57%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH M+ ++ D++ A L+ A G L A ++F+ I + +WN LI +
Sbjct: 323 RQIHGFMVKANADSDNYIAFGLVDMYA--KHGLLDDAKKVFDWIPQRDLVLWNALISGCS 380
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+A+ L+ MR+ GF N+ T VLK+ +++ +++ +Q+H K G D H
Sbjct: 381 HGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSH 440
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
VVN L+ Y LN A +VF++ + + +T+MI+ +Q +A+ LF +ML +G
Sbjct: 441 VVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 500
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+ L+S+L+ACA E G++VH + R F G ALV+ Y K G++ A
Sbjct: 501 LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDAD 560
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F +PE+ + +W+AMI GLA HGH + ALD+F ++ E I PN IT VL AC HAG
Sbjct: 561 LAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAG 620
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D ++ F SMK ++GIE EHY CM+DLLGR GK+ +A EL+ M ++ + +WGAL
Sbjct: 621 LVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGAL 680
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LAA + H + E+ +++ LEP G +V+L+N YA A
Sbjct: 681 LAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASA 721
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 196/393 (49%), Gaps = 25/393 (6%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASR--LLAF---CALSSSGDLSYAT 69
I PL +S+ Q IHA ++ S FA R LL+F C L S A
Sbjct: 7 IGPLLTRYAATQSLLQGAHIHAHLLKSGL----FAVFRNHLLSFYSKCRLPGS-----AR 57
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
R+F+ I P H W++L+ A +++ P A+ + +MR N+ VLK +
Sbjct: 58 RVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDA- 116
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-NRTLNVWTTMI 188
Q+H +GL D+ V N LV Y ++ AR VFDE R W ++
Sbjct: 117 --GFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLM 174
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
S Y ++ R + A+ +F +M+ G +PN + V++AC S LE G KVH V G++
Sbjct: 175 SAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYD 234
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
ALV MY+K G + A +F +PE ++ +WNA ISG HGH + AL+L ++
Sbjct: 235 KDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQM 294
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ +VPN T +L AC +G ++GRQI G M + +G +VD+ + G
Sbjct: 295 KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGL 353
Query: 369 VLEAEELIKRMVWKP--DVVMWGALLAACKNHG 399
+ +A+++ W P D+V+W AL++ C +HG
Sbjct: 354 LDDAKKVFD---WIPQRDLVLWNALISGC-SHG 382
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 191/392 (48%), Gaps = 12/392 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++HA +I + +D F A+ L+ S GD+ A +F + + WN I
Sbjct: 222 RKVHAMVIRTGYDKDVFTANALVDM--YSKLGDIRMAAVVFGKVPETDVVSWNAFISGCV 279
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ L + M+ +G PN T + +LKAC+ + N +QIH + K+ D D +
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNY 339
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y+ L++A++VFD I R L +W +ISG + + EAL LF +M EG
Sbjct: 340 IAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEG 399
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+ N TLA+VL + A + +VH + GF + + L+ Y K L A
Sbjct: 400 FDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAY 459
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +I + +MI+ L+ H E+A+ LF ++ ++ + P+ +L+AC
Sbjct: 460 RVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLS 519
Query: 332 FIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ G+Q+ + KR + + +V +CG + +A+ + K VV W A
Sbjct: 520 AYEQGKQVHAHLIKRQF--MSDVFAGNALVYTYAKCGSIEDADLAFSGLPEK-GVVSWSA 576
Query: 391 LLAACKNHGN----IEVAERVVKEIIALEPNN 418
++ HG+ ++V R+V E I+ PN+
Sbjct: 577 MIGGLAQHGHGKRALDVFHRMVDEHIS--PNH 606
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 180/414 (43%), Gaps = 36/414 (8%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP-NHFMWNTLIRAQA 91
Q+HA + + D F A+ L+A G + A +F+ N WN L+ A
Sbjct: 121 QLHALAMATGLGGDIFVANALVAM--YGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ ++ M G PN+ F+ V+ AC+ R L +++H V ++G D D+
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N LV YS D+ A VF ++ + W ISG AL L QM G
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN TL+S+L ACA SG LG ++H F+ + + LV MY K+G L AK
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAK 358
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD +P+R++ WNA+ISG + EAL LF ++ KE N T VL +
Sbjct: 359 KVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLE 418
Query: 332 FIDVGRQI------FGSMKRVYGIEPKIEHY---GC---------------------MVD 361
I RQ+ G + + + I+ Y C M+
Sbjct: 419 AISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMIT 478
Query: 362 LLGRCGKVLEAEELIKRMVWK---PDVVMWGALLAACKNHGNIEVAERVVKEII 412
L +C +A +L M+ K PD + +LL AC + E ++V +I
Sbjct: 479 ALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 8 LRQPPLPIP-PLSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
LR+ P P LS L + C S+ Q KQ+HA +I + D FA + L+ + G
Sbjct: 497 LRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVY--TYAKCG 554
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+ A F+ + W+ +I A + +A+ ++ M +PN T T VL
Sbjct: 555 SIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLC 614
Query: 124 ACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT-L 181
AC++ ++ K+ + + G++ C++ + L++A ++ + + +T
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNA 674
Query: 182 NVWTTMISG 190
VW +++
Sbjct: 675 AVWGALLAA 683
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 240/444 (54%), Gaps = 38/444 (8%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
SLLA C + + ++HA ++ D A RL A ++SG L ++ L + P
Sbjct: 29 SLLA-ACSTARRASELHAAVVRKGLDSDRAVAFRLQR--AYAASGRLDHSLTLLGRTKDP 85
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ + I A +S + L +M G P HT + L AC R L+ + +H
Sbjct: 86 TTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPAC---RGLSLGRALH 142
Query: 139 THVSKSGLDLDLHV-------------------------------VNCLVRCYSVSSDLN 167
+ K L D +V V ++ CY+ L+
Sbjct: 143 AYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALD 202
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
+AR++FD + + W MI GY Q + NEAL LF +ML EP+ VT+ VLSA A
Sbjct: 203 DARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVA 262
Query: 228 QSGCLELGEKVHVFVK-MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
Q G +E G+ +H +VK R ++ + TALV MY K G+L A A+F + ++I WN
Sbjct: 263 QLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWN 322
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
AMI+G A HG + +AL++F +L + + P DITF+G+L+AC H+G ++ GR F SM+
Sbjct: 323 AMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHE 382
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
YGI+PKIEHYGCMVDLLGR G + EA L++ + PD VMW +LLAAC+ H N+ + +R
Sbjct: 383 YGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQR 442
Query: 407 VVKEIIALEPNNHGVYVVLSNMYA 430
+ ++A N G+Y++LSN+YA
Sbjct: 443 IADFLVANGLANSGMYILLSNIYA 466
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 256/476 (53%), Gaps = 42/476 (8%)
Query: 5 CSSLRQ----PPLP--IPPLSLLADKC-KSMHQLKQIHAQMIISSRIQDHFAASRLL-AF 56
C+ LR+ PP P +P L A +C + ++ HA + D F + L+ A+
Sbjct: 56 CACLRRTGLPPPGPRALPALLRSAARCVGAGAYVRGAHALAFRVGSLDDGFVRTALVGAY 115
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
A GD A ++F+ + + W ++ + + N +A+ + M+ +G +Q
Sbjct: 116 AACGCVGD---ARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQL 172
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ----- 171
VL AC ++R L K IH+++ S + ++ H+ + L+ Y+ + + A +
Sbjct: 173 ILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGM 232
Query: 172 -----------VFDEIRNRTLNV---------------WTTMISGYAQSFRANEALMLFD 205
VF RNR + W+ MISGYA S + NEAL LF+
Sbjct: 233 PRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFN 292
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
M G P+ VT+ SV+SACA G L+ + +H F+K G + AL+ M+ K G
Sbjct: 293 DMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCG 352
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ A +F+ MP++N+ TW +MI+ A HG + AL LF ++ E + PN++TF+ +L
Sbjct: 353 GINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLY 412
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
ACCHAG + GR +F SM + YGIEPK EHYGCMVDLLGR + EA LI+ M +P+V
Sbjct: 413 ACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNV 472
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
+WG+LLAAC HG++++ K+I+ L+PN+ G V+LS +Y +++++ E+
Sbjct: 473 PVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEV 528
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 225/400 (56%), Gaps = 5/400 (1%)
Query: 38 MIISSRIQDHFAASRLLAF----CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
++ + R+ D A L ++ + +G L A +LF+ + ++F W +
Sbjct: 140 LVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRH 199
Query: 94 LNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
++A+ L+ M+R F N+ T + L A + ++SL+ K+IH H+ + GLDLD V
Sbjct: 200 DQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVV 259
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ L Y + AR +FD+ +R + WT MI Y + R E LF +L G
Sbjct: 260 WSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGI 319
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN T + VL+ACA ELG++VH ++ GF+ + + LVHMYTK G + A+
Sbjct: 320 WPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARR 379
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F+ MP ++ +W ++ISG A +G +EAL F L K P+ ITFVGVLSAC HAG
Sbjct: 380 VFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGL 439
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+D G + F S+K +G+ +HY C++DLL R G++ EAE++I +M +PD +W +LL
Sbjct: 440 VDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLL 499
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
C+ HGN+++A+R + + +EP N Y L+N+YA A
Sbjct: 500 GGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATA 539
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 161/324 (49%), Gaps = 34/324 (10%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P+ T++ +L+ C +R+L+ ++H H SG + + N ++ Y + L NA+++
Sbjct: 87 PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRL 146
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML------------------------ 208
FDE+ R L W MISGYA++ R EA LFDQM
Sbjct: 147 FDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEAL 206
Query: 209 --------MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
E F+ N T++S L+A A L LG+++H + G ++ ++ +AL M
Sbjct: 207 ELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDM 266
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G++ +A+ +FD +R++ +W AMI G EE LF L K I PN+ TF
Sbjct: 267 YGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTF 326
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
GVL+AC ++G+Q+ G M R+ G +P +V + +CG + A + M
Sbjct: 327 SGVLNACADHAAEELGKQVHGYMTRI-GFDPSSFAASTLVHMYTKCGNIKNARRVFNGMP 385
Query: 381 WKPDVVMWGALLAACKNHGNIEVA 404
+PD+V W +L++ +G + A
Sbjct: 386 -RPDLVSWTSLISGYAQNGQPDEA 408
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 243/446 (54%), Gaps = 36/446 (8%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
LL KC +M+QLKQ HAQ++ S +F SRLL FCA S +G LS+A +LF IQ P
Sbjct: 10 LLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPT 69
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
++NT+I+A AI ++ + R G P+ +T +VLKA + + +++ + IH
Sbjct: 70 ICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHA 129
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--------------------- 178
K G ++ V N L+ Y ++ +ARQVFDE+
Sbjct: 130 CTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDT 189
Query: 179 ----------RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
+ +W MISGY Q+ E L +F M + EP+ + ++LSACA
Sbjct: 190 ARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAH 249
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G L+ G +H ++ G + + T L+ MY K G L AK LF+ M +R+ WNAM
Sbjct: 250 MGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAM 309
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
ISG+A G E A+ LF ++EK I P++ITF+ V AC ++G +D G +I+ M V+
Sbjct: 310 ISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIWNRMSTVHK 369
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRM--VWKP--DVVMWGALLAACKNHGNIEVA 404
IEPK EHYGC++DLL R G+ EAE +I+R+ P + V W A L+AC HG + A
Sbjct: 370 IEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQA 429
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA 430
E + + LE ++ G YV+LSNMYA
Sbjct: 430 EVAAERLFQLERHS-GAYVLLSNMYA 454
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 237/418 (56%), Gaps = 9/418 (2%)
Query: 33 QIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFM--WNTLIRA 89
Q+H +I + + F + L++ +C S+ ++ A ++F+ + +N LI
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCST---IASARKVFDENHHSRNLAVCYNALIAG 133
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ + A+ L+ MR+ G + N T ++ C+ L +H + GLD D
Sbjct: 134 YSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGD 193
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
L V NCL+ Y ++ AR++FD + + L W MISGYAQ+ A L L+ +M
Sbjct: 194 LSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEF 253
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
G P+ VTL VLS+CA G G +V +++ GF L AL++MY + G L K
Sbjct: 254 TGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVK 313
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A+A+FD M E+N+ +W A+I+G HG E A+ LF ++ +P+ FV VLSAC H
Sbjct: 314 ARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSH 373
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
AG + G F +M+R YG++P EHY C+VDLLGR G++ EA +LI M +PD +WG
Sbjct: 374 AGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVL 447
ALL ACK H N+E+AE +++I EP N G YV+LSN+++EA +M+ IL V+V+
Sbjct: 434 ALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNME---GILRVRVM 488
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 195/349 (55%), Gaps = 8/349 (2%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN +R A + +A+ LY M +G +PN TF F K+C+++ Q+H HV
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN-RTLNV-WTTMISGYAQSFRANEA 200
K+G + + V L+ Y S + +AR+VFDE + R L V + +I+GY+ + R ++A
Sbjct: 84 KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
++LF QM EG N+VT+ ++ CA L G +H G + +G L+ M
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTM 203
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y + G++ A+ LFD MPE+ + TWNAMISG A +G A LDL+RK+E IVP+ +T
Sbjct: 204 YVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTL 263
Query: 321 VGVLSACCHAGFIDVGRQIFGSMK-RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
VGVLS+C H G GR++ ++ +G P +++ ++++ RCG +++A + M
Sbjct: 264 VGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDGM 321
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE--PNNHGVYVVLS 426
K +V+ W A++A HG E+A ++ E+I+ + P+ VLS
Sbjct: 322 TEK-NVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLS 369
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
+ A+WNA + LA H +EAL+L+ ++ PN TF +C G Q
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+ G + + G EP+ ++ + +C + A ++
Sbjct: 78 LHGHVIKT-GCEPEPFVQTSLISMYCKCSTIASARKVF 114
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 245/452 (54%), Gaps = 48/452 (10%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C S L + HAQ+++S Q ++ + LL+ S G L A ++F I +P+ +WN
Sbjct: 37 CVSFRNLAKTHAQIVVSGFSQKNYILNHLLSLYI--SFGSLGSAQKVFEDITAPSTTVWN 94
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I+ S K+I L+ M G N T++F+L AC R +QIH V +
Sbjct: 95 QIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVN 154
Query: 145 GL---------------------DLDL-------------HVV--NCLVRCYSVSSDLNN 168
G D DL +VV N L+ Y D +
Sbjct: 155 GYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGYVRRGDFDG 214
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
AR+VFDE+ R + WT M++G+AQ+ + AL LFDQM G E + V L + LSACA+
Sbjct: 215 ARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAE 274
Query: 229 SGCLELGEKVHVFV----KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
G L LG+ +H +V + R + L AL+HMY GA+ A LF+ +P+RN +
Sbjct: 275 LGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQRNTVS 334
Query: 285 WNAMISGLASHGHAEEALDLFRKL---EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
W+++I+G A G EA+ +F+ + + ++ P++ITF+G L+AC HAG I G ++F
Sbjct: 335 WSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQ 394
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM + +G+ P+IEHYGCMVDLL R G + EA LI+ M KP+ +WGALL+ C+ H N
Sbjct: 395 SMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKND 454
Query: 402 EVAERVVKEI-IALEPNNH--GVYVVLSNMYA 430
E+ V K + ++PNN G +++L+N+YA
Sbjct: 455 EIVSHVAKHLSFEIDPNNQAAGYFMLLANVYA 486
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 152/331 (45%), Gaps = 44/331 (13%)
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
R+ Q F+ VLK+C + R+L + H + SG +++N L+ Y L
Sbjct: 21 RSSRVRQQFIFS-VLKSCVSFRNL---AKTHAQIVVSGFSQKNYILNHLLSLYISFGSLG 76
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
+A++VF++I + VW +I G+ +S + +++ LF +M + G E N T + +LSAC
Sbjct: 77 SAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACV 136
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHM--------------------------- 260
+S GE++H V + G+ + T L+++
Sbjct: 137 RSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNV 196
Query: 261 ---------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
Y + G A+ +FD MPERN+ TW M++G A +G + AL LF ++ +
Sbjct: 197 VGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRA 256
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG---IEPKIEHYGCMVDLLGRCGK 368
+ + + V LSAC G + +G+ I G ++R + + + ++ + CG
Sbjct: 257 GVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGA 316
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ A +L + + + + V W +++ G
Sbjct: 317 MDLAYKLFEEIP-QRNTVSWSSIITGFAKQG 346
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 233/401 (58%), Gaps = 8/401 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+H +I + + + + L+ F ++ GD A+R+F+ + + W +I
Sbjct: 54 RQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGD---ASRVFDEMLVRDVVSWTGVISGY 110
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ D+A+ L++ R PN TF VL AC L+ K IH KS + L
Sbjct: 111 VRAGLFDEAVGLFL---RMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGL 167
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ Y L A+QVFDE+ + + WT++ISG Q EAL LF M
Sbjct: 168 EVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSS 227
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G EP+ + L SVLSACA+ G L+ G VH + + + +GTA+V MY K G + +
Sbjct: 228 GIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMS 287
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F+ MP +N+ TWNA+++GLA HGHA + L+LF ++ + + PN++TF+ +L+ACCH
Sbjct: 288 MQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHC 347
Query: 331 GFIDVGRQIFGSMK-RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
G ++ GRQ F MK + Y + P++EHYGCMVDLL R + EA EL K M PDV + G
Sbjct: 348 GLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMG 407
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
ALL+ACK +GN E+ + ++ + L+ ++ GVYV+LSN++A
Sbjct: 408 ALLSACKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHA 448
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 184/348 (52%), Gaps = 11/348 (3%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
+N L+ A P A +Y + + GF P+ TF VLK+C+ + +Q+H +
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G +++V N LV YSV +A +VFDE+ R + WT +ISGY ++ +EA+
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF +M EPN+ T SVL AC + G L +G+ +H F +G + AL+ MY
Sbjct: 122 LFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYV 178
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G L AK +FD + E++I +W ++ISGL +EAL+LF+ ++ I P+ I
Sbjct: 179 KCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTS 238
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSAC G +D GR + + R I+ I+ MVD+ +CG + + ++ M K
Sbjct: 239 VLSACARLGALDYGRWVHEHIDR-KAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK 297
Query: 383 PDVVMWGALLAACKNHGN----IEVAERVVKEIIALEPNNHGVYVVLS 426
+V+ W ALL HG+ +E+ E +V+ + + PN +L+
Sbjct: 298 -NVLTWNALLNGLAMHGHAYKVLELFEEMVR--VGMRPNEVTFLAILT 342
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 225/406 (55%), Gaps = 5/406 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSS----SGDLSYATRLFNSIQSPNHFMWNTLI 87
K + A +I S I + +S + AL S GDL A LF ++ + WN +I
Sbjct: 344 KALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAII 403
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
A + +A+ LY M+ G P + TF +L AC+N + K IH + +SG+
Sbjct: 404 AGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIK 463
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ H+ N L+ Y L A+ VF+ + R + W +MI+G+AQ A LF +M
Sbjct: 464 SNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEM 523
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
E EP+++T ASVLS C LELG+++H + G ++ LG AL++MY + G+L
Sbjct: 524 QNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSL 583
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND-ITFVGVLSA 326
A+ +F S+ R++ +W AMI G A G +A++LF +++ E P D TF +LSA
Sbjct: 584 QDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSA 643
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG + G QIF SM+ YG+ P IEHYGC+V LLGR + EAE LI +M + PD
Sbjct: 644 CNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAA 703
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+W LL AC+ HGNI +AE + L N VY++LSN+YA A
Sbjct: 704 VWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAA 749
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 196/368 (53%), Gaps = 4/368 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH + D + L+ C GD+ A + F I + ++N LI A A
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCV--RCGDVDSAKQAFKGIADRDVVVYNALIAALA 306
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A Y MR G A N+ T+ +L ACS ++L K IH+H+S+ G D+
Sbjct: 307 QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ 366
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ N L+ Y+ DL AR++F + R L W +I+GYA+ EA+ L+ QM EG
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P VT +LSACA S G+ +H + G + L AL++MY + G+L +A+
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ R++ +WN+MI+G A HG E A LF++++ E++ P++ITF VLS C +
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+++G+QI G + G++ + ++++ RCG + +A + + + DV+ W A+
Sbjct: 547 ALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAM 604
Query: 392 LAACKNHG 399
+ C + G
Sbjct: 605 IGGCADQG 612
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 218/420 (51%), Gaps = 10/420 (2%)
Query: 12 PLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
P I +S+L C S +L K+IH+Q+I + +D + LL+ GDL A
Sbjct: 126 PNKITYISILT-ACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSM--YGKCGDLPRA 182
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
++F I + +NT++ A + + L+ M G +P++ T+ +L A +
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
L+ K+IH + GL+ D+ V LV D+++A+Q F I +R + V+ +I
Sbjct: 243 SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALI 302
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+ AQ EA + +M +G N T S+L+AC+ S LE G+ +H + G
Sbjct: 303 AALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+G AL+ MY + G L KA+ LF +MP+R++ +WNA+I+G A EA+ L++++
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ E + P +TF+ +LSAC ++ G+ I + R GI+ ++++ RCG
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGS 481
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
++EA+ + + + DV+ W +++A HG+ E A ++ +E+ LEP+N VLS
Sbjct: 482 LMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 189/382 (49%), Gaps = 4/382 (1%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
+ K+IHAQM+ + D F ++ L+ S + A ++F + + WN+LI
Sbjct: 45 EAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRS--VLDAHQVFKEMPRRDVISWNSLISC 102
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
A KA L+ M+ GF PN+ T+ +L AC + L K+IH+ + K+G D
Sbjct: 103 YAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
V N L+ Y DL ARQVF I R + + TM+ YAQ E L LF QM
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EG P+ VT ++L A L+ G+++H G +GTALV M + G +
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDS 282
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
AK F + +R++ +NA+I+ LA HGH EA + + ++ + + N T++ +L+AC
Sbjct: 283 AKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACST 342
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ ++ G+ I + G ++ ++ + RCG + +A EL M K D++ W
Sbjct: 343 SKALEAGKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWN 400
Query: 390 ALLAACKNHGNIEVAERVVKEI 411
A++A + A R+ K++
Sbjct: 401 AIIAGYARREDRGEAMRLYKQM 422
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 174/327 (53%), Gaps = 9/327 (2%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
++ T+ +L+ C+ R L K+IH + ++G+ D+ + N L+ Y + +A QVF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
E+ R + W ++IS YAQ +A LF++M GF PN +T S+L+AC LE
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G+K+H + G++ + +L+ MY K G L +A+ +F + R++ ++N M+ A
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+ +E L LF ++ E I P+ +T++ +L A +D G++I + G+ I
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIH-KLTVEEGLNSDI 264
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAE---RVVK 409
+V + RCG V A++ K + + DVV++ AL+AA HG N+E E R+
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGIADR-DVVVYNALIAALAQHGHNVEAFEQYYRMRS 323
Query: 410 EIIALEPNNHGVYVVLSNMYAEAESMK 436
+ +AL N Y+ + N + +++++
Sbjct: 324 DGVAL---NRTTYLSILNACSTSKALE 347
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 95/182 (52%), Gaps = 4/182 (2%)
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
E + T ++L C + L +++H + G L L++MY K ++ A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F MP R++ +WN++IS A G ++A LF +++ +PN IT++ +L+AC
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 333 IDVGRQIFGS-MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G++I +K Y +P++++ ++ + G+CG + A ++ + + DVV + +
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGISPR-DVVSYNTM 200
Query: 392 LA 393
L
Sbjct: 201 LG 202
>gi|22331393|ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g28660
gi|9294280|dbj|BAB02182.1| unnamed protein product [Arabidopsis thaliana]
gi|20259531|gb|AAM13885.1| unknown protein [Arabidopsis thaliana]
gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis thaliana]
gi|332643950|gb|AEE77471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 246/424 (58%), Gaps = 12/424 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSS-SGDLSYATRLFNSI 75
L L + +C ++ Q+K H+ II ++ +A S+LL AF L + + YA+ +F+SI
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 76 QSPNHFMWNTLIRAQASSLNPD---KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+ PN F+++T+IR + S P + L + P+ TF F++ AC +
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 133 CCKQIHTHVSKSGLDL-DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
KQIH V K+G+ L D HV ++R Y L +AR+VFDEI + W +++GY
Sbjct: 134 VGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM-RGFEMG 250
+ +E L +F +ML+ G EP+ ++ + L+ACAQ G L G+ +H FVK R E
Sbjct: 194 VRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESD 253
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+GTALV MY K G + A +F+ + RN+ +W A+I G A++G+A++A ++E+
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIER 313
Query: 311 EQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E I P+ + +GVL+AC H GF++ GR + +M+ YGI PK EHY C+VDL+ R G++
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRL 373
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN----HGVYVVL 425
+A +LI++M KP +WGALL C+ H N+E+ E V+ ++ LE N V L
Sbjct: 374 DDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
Query: 426 SNMY 429
SN+Y
Sbjct: 434 SNIY 437
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 222/394 (56%), Gaps = 31/394 (7%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++F+ + WN ++ K+ L++ M + G +PN T +L ACS
Sbjct: 161 ARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSK 220
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL------ 181
++ L K I+ +++ ++ +L + N L+ ++ +++ A+ VFD ++NR +
Sbjct: 221 LKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSI 280
Query: 182 -----NV--------------------WTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
N+ WT MI GY + R EAL LF +M M +P+
Sbjct: 281 VTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDE 340
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
T+ S+L+ACA G LELGE V ++ + +G AL+ MY K G + KAK +F
Sbjct: 341 FTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKE 400
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
M ++ TW AMI GLA +GH EEAL +F + + I P++IT++GVL AC HAG ++ G
Sbjct: 401 MHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKG 460
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
+ F SM +GI+P + HYGCMVDLLGR G++ EA E+I M KP+ ++WG+LL AC+
Sbjct: 461 QSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACR 520
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
H N+++AE K+I+ LEP N VYV+L N+YA
Sbjct: 521 VHKNVQLAEMAAKQILELEPENGAVYVLLCNIYA 554
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 212/419 (50%), Gaps = 34/419 (8%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P+SLL +KCKSM+QLKQIH+ I D R++AFC SG + YA ++F++I
Sbjct: 10 PISLL-EKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
P F+WNT+I+ + +P + +Y+ M + P++ TF F+LK + +L K
Sbjct: 69 QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+ H K G D +L V + +S+ ++ AR+VFD + W M+SGY + +
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
++ MLF +M G PNSVTL +LSAC++ LE G+ ++ ++ E IL
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENV 248
Query: 257 LVHMYTKNGALAKAKALFDSM-------------------------------PERNIATW 285
L+ M+ G + +A+++FD+M PER+ +W
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSW 308
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
AMI G EAL LFR+++ + P++ T V +L+AC H G +++G + + +
Sbjct: 309 TAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 368
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
I+ ++D+ +CG V +A+++ K M K D W A++ +G+ E A
Sbjct: 369 -NSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHK-DKFTWTAMIVGLAINGHGEEA 425
>gi|356542056|ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 595
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 247/433 (57%), Gaps = 25/433 (5%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L DK Q+KQIHAQ+I + F A + +C + A +F P+
Sbjct: 134 LQDKFNVSCQMKQIHAQLITNGLKYPTFWAKLIEHYCGSPDQHIANNARLVFQYFDKPDL 193
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-NQHTFTFVLKACS---NVRSLNCCKQ 136
F++NTLIR + P+ +I ++ N G +++T+ FVL AC+ + +L +Q
Sbjct: 194 FLFNTLIRC----VQPNDSILIFRNEFSRGLMFFDEYTYNFVLGACARSPSASTLWVGRQ 249
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H + K G++ ++ V V Y+ + D+ ++R+VFDE+ R+ W MI+GY+
Sbjct: 250 LHALIVKHGVESNIVVPTTKVYFYASNKDIISSRKVFDEMPRRSTVTWNAMITGYSSLKE 309
Query: 197 ANE-----ALMLFDQMLME--GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-- 247
N+ AL LF ML++ G +P + T+ SVLSA +Q G LE G +H F +
Sbjct: 310 GNKKYALNALYLFIDMLIDVSGIKPTATTIVSVLSAVSQIGMLETGACIHGFAEKTVCTP 369
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
E +GT LV MY+K G L A ++F M ++NI TW AM +GLA HG +++L++ K
Sbjct: 370 EDDVFIGTGLVDMYSKCGCLDSALSVFWRMNQKNIMTWTAMTTGLAIHGKGKQSLEVLYK 429
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ + PN+ TF LSACCH G ++ G Q+F MKR +G+ P+I+HYGC+VDLLGR G
Sbjct: 430 MGAYGVKPNEATFTSFLSACCHGGLVEEGLQLFLEMKRTFGVMPQIQHYGCIVDLLGRAG 489
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE-------PNNHG 420
K+ EA + I +M PD V+W +LLAAC HG++ + E+V K ++ LE P +
Sbjct: 490 KLEEAYDFIMQMPINPDAVIWRSLLAACNIHGDVVMGEKVGKFLLQLEEWSSAESPKSED 549
Query: 421 VYVVLSNMYAEAE 433
Y+ LSN+YA AE
Sbjct: 550 -YIALSNVYALAE 561
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 227/406 (55%), Gaps = 3/406 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
LKQ HA+++++ + ++L + + ++ L S +P+ F++++L R
Sbjct: 23 LKQAHARLVVTGHGRSLPLITKLATLAVAAGAAPYAHL--LATSHPAPDSFLFSSLTRTA 80
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A P AI Y + + TFT V KAC+++ +L IH H G D
Sbjct: 81 AHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGAAIHAHSILLGFGSDR 140
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V+ LV YS L AR++FD IR+R++ W MISGY Q+ A + ++ +M
Sbjct: 141 FVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIGVYKEMQAA 200
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
P+S+T + LSACAQ+G L+LG +V V ++ LG+ALV+MY + G + KA
Sbjct: 201 KAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYARCGVVDKA 260
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ FD++ ERN+ TW +MI+G HGH EA+ LF + E PN +TFV VLSAC HA
Sbjct: 261 RRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVAVLSACAHA 320
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK-RMVWKPDVVMWG 389
G + GR F MKRVYG+ P++EHY MVD+ GR G + EA + I M +P +W
Sbjct: 321 GLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFISDYMPGEPGPEVWT 380
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
A+L ACK H N + V + +IALEP N +V+LSN+YA + M
Sbjct: 381 AVLGACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGKM 426
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 163/404 (40%), Positives = 226/404 (55%), Gaps = 10/404 (2%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
++KQIH + + D F + + S GD A+++F+ + + W LI
Sbjct: 202 EVKQIHTLAVKTDLWCDMFVQNSFVH--VYSICGDTVGASKVFDFMPVRDVVSWTGLISG 259
Query: 90 --QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+A N A+FL M++ APN TF +L AC + LN K IH VSK
Sbjct: 260 YMKAGLFNDAVALFLRMDV-----APNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHG 314
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+L V N L+ Y + +A+++FDEI + + WT+MISG Q E+L LF +M
Sbjct: 315 KELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEM 374
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L GFEP+ V L SVLSACA G L+ G VH ++ + +GT+L+ MY K G +
Sbjct: 375 LGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCI 434
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +F+ +P +NI TWNA I GLA +GH +EAL F L + PN+ITF+ V SAC
Sbjct: 435 EMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSAC 494
Query: 328 CHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CH+G +D GR F M Y + P +EHYGCMVDLL R V EA ELI +M PDV
Sbjct: 495 CHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQ 554
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ GALL+A +GN+E+ ++K + E GVYV+LSN YA
Sbjct: 555 IIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNWYA 598
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 187/379 (49%), Gaps = 9/379 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ-SPNHFM 82
+C + KQIHAQ++ S+ + + ++ F + D+ Y S + F
Sbjct: 93 RCNDLRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHVT-DIRYPCNFLKQFDWSFSSFP 151
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N +I + P AI +Y + GF P+ +T VLK+C+ + KQIHT
Sbjct: 152 CNLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAV 211
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K+ L D+ V N V YS+ D A +VFD + R + WT +ISGY ++ N+A+
Sbjct: 212 KTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVA 271
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF +M PN+ T S+L AC + GCL LG+ +H V ++ L+ MY
Sbjct: 272 LFLRM---DVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYV 328
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K ++ AK LFD +PE++I +W +MISGL + +E+LDLF ++ P+ +
Sbjct: 329 KCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTS 388
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSAC G +D GR + + I+ + ++D+ +CG + A+++ + K
Sbjct: 389 VLSACASLGLLDYGRWVHEYIDHSR-IKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSK 447
Query: 383 PDVVMWGALLA--ACKNHG 399
++ W A + A HG
Sbjct: 448 -NIRTWNAYIGGLAINGHG 465
>gi|15228954|ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g56550
gi|7594533|emb|CAB88058.1| putative protein [Arabidopsis thaliana]
gi|91806586|gb|ABE66020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646013|gb|AEE79534.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 247/446 (55%), Gaps = 17/446 (3%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAA-SRLLAFCALSSSGDLSYATRLFNSIQS-PNHFM 82
C SM +L++IH+ +II+ +Q H + + LL FCA+S +G LS+A LF+ S P+
Sbjct: 15 CNSMKKLRKIHSHVIING-LQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSD 73
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WN LIR ++S +P +I Y M + + P+ TF F LK+C ++S+ C +IH V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+SG D V LVRCYS + + A +VFDE+ R L W MI ++ N+AL
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
++ +M EG +S TL ++LS+CA L +G +H E + AL+ MY
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G+L A +F+ M +R++ TWN+MI G HGH EA+ FRK+ + PN ITF+
Sbjct: 254 AKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFL 313
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
G+L C H G + G + F M + + P ++HYGCMVDL GR G++ + E+I
Sbjct: 314 GLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSC 373
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
D V+W LL +CK H N+E+ E +K+++ LE N G YV+++++Y+ A +
Sbjct: 374 HEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQ----- 428
Query: 442 LLVQVLFAGLASAADILQNPDFESPP 467
AS ++++ D ++ P
Sbjct: 429 --------AFASMRKLIRSHDLQTVP 446
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 156/309 (50%), Gaps = 23/309 (7%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR--CYSVSSDLNNARQVFDEI-R 177
+L+ C++++ L ++IH+HV +GL + N L+R SV+ L++A+ +FD
Sbjct: 11 MLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF-EPNSVTLASVLSACAQSGCLELGE 236
+ + + W +I G++ S +++ +++ML+ P+ T L +C + +
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++H V GF AI+ T+LV Y+ NG++ A +FD MP R++ +WN MI + G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+AL +++++ E + + T V +LS+C H +++G + + I I
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVML-------HRIACDIRCE 240
Query: 357 GC------MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
C ++D+ +CG + A + M K DV+ W +++ HG+ A ++
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRK 299
Query: 411 IIA--LEPN 417
++A + PN
Sbjct: 300 MVASGVRPN 308
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/326 (42%), Positives = 203/326 (62%), Gaps = 3/326 (0%)
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
R G A + H +++A + S+ +++ + D+ N ++ Y S DL
Sbjct: 99 RAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYA---DVVSWNVMIDGYVKSGDLA 155
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
AR++FD + R + WT +I YAQ + EA+ +F +M +EG EP+ V L SVLSAC
Sbjct: 156 RARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACG 215
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
G ++LGE VH FV RG L A++ MY K G++ KA +F+ M +++I TW
Sbjct: 216 DLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTT 275
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
MI+G A HG EA++LFR++EKE + PNDITF+ VLS C H G D+GR F +M Y
Sbjct: 276 MIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQY 335
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
I+P++EHYGCM+DLLGR G ++EA LI+ M +K + +WGALLAA + HG+ E+ E+
Sbjct: 336 KIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQA 395
Query: 408 VKEIIALEPNNHGVYVVLSNMYAEAE 433
+ +I LEP+N G Y++LSN+YAE E
Sbjct: 396 LLHLIELEPHNSGNYILLSNIYAEQE 421
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/373 (38%), Positives = 219/373 (58%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G +S A +F+ + WN++I S + + A+ ++ M G P T
Sbjct: 177 SKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVM 236
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L AC+++ L K +H V + LD D+ V+N L+ YS ++ A +F +RN+
Sbjct: 237 GALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNK 296
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
TL W MI GYAQ+ NEAL F +M +P+S T+ SV+ A A+ + +H
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIH 356
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V R + + TALV MY K GA+ A+ LFD M R++ TWNAMI G +HG +
Sbjct: 357 GLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGK 416
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+++LF++++K I PNDITF+ LSAC H+G ++ G F SMK+ YGIEP ++HYG M
Sbjct: 417 TSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAM 476
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G++ +A + I++M KP + ++GA+L ACK H N+++ E+ EI L P++
Sbjct: 477 VDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG 536
Query: 420 GVYVVLSNMYAEA 432
G +V+L+N+YA A
Sbjct: 537 GYHVLLANIYATA 549
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 172/319 (53%), Gaps = 2/319 (0%)
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+++ A S + D A+ + M+ P + FT++LK C + L K+IH V SG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+L + +V Y+ +N+A +FD + R L W TMISGYAQ+ A ALML
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EG P+S+T+ S+L A A + L +G VH +V GFE + TALV MY+K G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+++ A+ +FD M R + +WN+MI G G AE A+ +F+K+ E + P ++T +G L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC G ++ G+ + + ++ ++ + ++ + +C +V A ++ K + K +
Sbjct: 241 ACADLGDLERGKFVHKLVDQL-KLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKT-L 298
Query: 386 VMWGALLAACKNHGNIEVA 404
V W A++ +G + A
Sbjct: 299 VSWNAMILGYAQNGCVNEA 317
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 202/418 (48%), Gaps = 6/418 (1%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
+K S+R L L + + K+IH +I S + FA + ++ A
Sbjct: 21 MKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYA--KC 78
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
++ A +F+ + + WNT+I A + A+ L + M G P+ T +L
Sbjct: 79 RQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSIL 138
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
A ++ R L +H +V ++G + ++V LV YS ++ AR +FD + +RT+
Sbjct: 139 PAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVV 198
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +MI GY QS A A+++F +ML EG +P +VT+ L ACA G LE G+ VH V
Sbjct: 199 SWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLV 258
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ + +L+ MY+K + A +F ++ + + +WNAMI G A +G EAL
Sbjct: 259 DQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEAL 318
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ F +++ I P+ T V V+ A + I G + R + ++ + +VD+
Sbjct: 319 NAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRF-LDKNVFVMTALVDM 377
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
+CG + A +L M + V+ W A++ HG + + + KE+ ++PN+
Sbjct: 378 YAKCGAIHTARKLFDMMNAR-HVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPND 434
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 230/406 (56%), Gaps = 3/406 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH ++ FA L A G L A R F I+SP+ WN +I A +
Sbjct: 380 RQIHGMCAKFGLGRNVFAGCSLCDMYA--KFGFLPSAIRAFYQIESPDLVSWNAIIAAFS 437
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S + ++AI+ + M TG P+ TF +L AC + ++N QIH+++ K GLD +
Sbjct: 438 DSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAA 497
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEI-RNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ Y+ S+L++A VF ++ N L W ++S Q +A E LF ML
Sbjct: 498 VCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFS 557
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
+P+++T+ ++L CA+ LE+G +VH F G + + L+ MY K G+L A
Sbjct: 558 ENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHA 617
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ +F S +I +W+++I G A G EAL+LFR ++ + PN++T++GVLSAC H
Sbjct: 618 RDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHI 677
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G ++ G + +M+ GI P EH CMVDLL R G + EAE IK+M + PD+ MW
Sbjct: 678 GLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKT 737
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
LLA+CK HGN+++AER + I+ L+P+N V+LSN++A + K
Sbjct: 738 LLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWK 783
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 201/423 (47%), Gaps = 7/423 (1%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L +S+ K+IH ++ S+ D + +L G L A + F+++Q
Sbjct: 163 LILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNM--YGKCGSLKDARKAFDTMQL 220
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
N W +I + + + AI +Y+ M ++G+ P+ TF ++KAC ++ +Q+
Sbjct: 221 RNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQL 280
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H HV KSG D L N L+ Y+ + +A VF I + L W +MI+G+ Q
Sbjct: 281 HGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYE 340
Query: 198 NEALMLFDQMLMEGF-EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
EAL LF M +GF +PN SV SAC E G ++H G G +
Sbjct: 341 IEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCS 400
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L MY K G L A F + ++ +WNA+I+ + G EA+ F ++ ++P+
Sbjct: 401 LCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPD 460
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
ITF+ +L AC I+ G QI + ++ G++ + ++ + +C + +A +
Sbjct: 461 GITFLSLLCACGSPVTINQGTQIHSYIIKI-GLDKEAAVCNSLLTMYTKCSNLHDAFNVF 519
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE--PNNHGVYVVLSNMYAEAES 434
K + ++V W A+L+AC H R+ K ++ E P+N + +L AE S
Sbjct: 520 KDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTC-AELAS 578
Query: 435 MKM 437
+++
Sbjct: 579 LEV 581
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 161/289 (55%), Gaps = 3/289 (1%)
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T+ ++ AC+++RSL K+IH H+ KS DL + N ++ Y L +AR+ FD +
Sbjct: 159 TYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTM 218
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+ R + WT MISGY+Q+ + N+A++++ QML G+ P+ +T S++ AC +G ++LG
Sbjct: 219 QLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGR 278
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++H V G++ I AL+ MYT+ G + A +F + +++ +W +MI+G G
Sbjct: 279 QLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLG 338
Query: 297 HAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
+ EAL LFR + ++ PN+ F V SAC + GRQI G M +G+ +
Sbjct: 339 YEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHG-MCAKFGLGRNVFA 397
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ D+ + G + A + + PD+V W A++AA + G++ A
Sbjct: 398 GCSLCDMYAKFGFLPSAIRAFYQ-IESPDLVSWNAIIAAFSDSGDVNEA 445
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 251/469 (53%), Gaps = 71/469 (15%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS------YATRLFNSIQSPNHFMWN 84
L+QIHA MI++ + +L+ A+S G + YA ++F I P+ FMWN
Sbjct: 17 LRQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPDTFMWN 76
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
T IR + S +P A+ LY M P+ TF VLKAC+ + +N +H V +
Sbjct: 77 TYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFRL 136
Query: 145 GLDLDLHVVNCLV----RC---------------------------YSVSSDLNNARQVF 173
G ++ V N L+ +C Y+ DL+ AR++F
Sbjct: 137 GFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLF 196
Query: 174 DEIRNRTLNVWTTMISGYAQ--------------------SFRA-----------NEALM 202
DE+ R L W MI+ Y + S+ A EAL
Sbjct: 197 DEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLNQEALE 256
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV-FVKMRGFEMGAILGTALVHMY 261
LFD+M G P+ VT+ S+LSACA G + GEKVH +++ ++ +LG ALV MY
Sbjct: 257 LFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGKLSTLLGNALVDMY 314
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + K +F + ++++ +WN++I GLA HGHAEE+L LFR++++ ++ P++ITFV
Sbjct: 315 AKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEITFV 374
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL+AC H G +D G + F MK Y IEP I H GC+VD+L R G + EA + I M
Sbjct: 375 GVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIASMKI 434
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+P+ ++W +LL ACK HG++E+A+R ++++ + + G YV+LSN+YA
Sbjct: 435 EPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYA 483
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 4/201 (1%)
Query: 238 VHVFVKMRGFEMGAILGTAL--VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
V+ F GF +L TA+ V A +F +P+ + WN I G +
Sbjct: 26 VNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPDTFMWNTYIRGSSQS 85
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
A+ L+ ++ + P++ TF VL AC +++ G + G + R+ G +
Sbjct: 86 HDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFRL-GFGSNVVV 144
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
++ +CG + A ++ K DVV W AL+A G++ VA ++ E+ +
Sbjct: 145 RNTLLVFHAKCGDLKVANDIFDDSD-KGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRD 203
Query: 416 PNNHGVYVVLSNMYAEAESMK 436
+ V + + E E +
Sbjct: 204 LVSWNVMITAYTKHGEMECAR 224
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 237/409 (57%), Gaps = 6/409 (1%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
++ + +++HA MI + + +RL+ + GD A R+ + + N W
Sbjct: 25 AIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD---ARRVLDEMPERNVVSWTA 81
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + +A+ L++ M +G APN+ TF VL +C++ +QIH+ V K+
Sbjct: 82 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 141
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ + V + L+ Y+ + + AR+VFD + R + T +ISGYAQ EAL LF
Sbjct: 142 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 201
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
++ EG N VT ASVL+A + L+ G +VH V +L +L+ MY+K G
Sbjct: 202 RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 261
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVL 324
+L ++ +FDSMPER + +WNAM+ G + HG EA++LF+ +++E ++ P+ +TF+ VL
Sbjct: 262 SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 321
Query: 325 SACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
S C H G D G +IF M + G EP+IEHYGC+VDL GR G+V EA E IK+M ++P
Sbjct: 322 SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 381
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG+LL AC+ H N+ + E V + ++ +E N G YV+LSN+YA A
Sbjct: 382 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASA 430
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 173/313 (55%), Gaps = 13/313 (4%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VL C + ++ +++H H+ K+ + +++ L+ Y+ L +AR+V DE+ R
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ WT MISGY+Q A+EAL LF +MLM G PN T A+VL++C S +LG ++H
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
V FE +G++L+ MY K G + +A+ +FD +PER++ + A+ISG A G EE
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY---- 356
ALDLFR+L++E + N +T+ VL+A +D GRQ+ + R K+ Y
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA-----KLPFYVVLQ 250
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAE--RVVKEIIA 413
++D+ +CG + + + M + V+ W A+L HG E E +++KE
Sbjct: 251 NSLIDMYSKCGSLTYSRRIFDSMPERT-VISWNAMLVGYSKHGLGREAVELFKLMKEENK 309
Query: 414 LEPNNHGVYVVLS 426
++P++ VLS
Sbjct: 310 VKPDSVTFLAVLS 322
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M ++G E SVL+ C + G++VH + +E L T L+ +Y K
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L A+ + D MPERN+ +W AMISG + G+A EAL LF ++ PN+ TF VL++
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C + +GRQI + + E I ++D+ + GK+ EA + + + DVV
Sbjct: 121 CTSSSGFQLGRQIHSLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER-DVV 178
Query: 387 MWGALLAACKNHGNIEVA 404
A+++ G E A
Sbjct: 179 SCTAIISGYAQLGLDEEA 196
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 271/509 (53%), Gaps = 71/509 (13%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNS 74
P LS + L Q HA +I+S F +RLLA ALS S+ DL +A +F
Sbjct: 12 PSLSQALTALTATSHLHQAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHAKTIFLH 71
Query: 75 IQSPNHFMWNTLIRAQASSLN--------------PDKAIFLYMNMRRTGFAP------- 113
+P+ FM+NT+I A + +L+ PD F ++ ++ + +P
Sbjct: 72 THNPSPFMFNTIIMASSRTLDSVTFYVCMLHAGHFPDNFTFPFL-IKSSSASPTSLLGHQ 130
Query: 114 -NQHTFTF-----------VLKACSNVRSLNCCKQIH----------------THVSKSG 145
+ H F ++ S+ R L +++ T S SG
Sbjct: 131 LHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSG 190
Query: 146 -LD-----LDLHVV------NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+D DL + N ++ Y+ SS +N AR++FDE+ +R W+ M+SGY+Q
Sbjct: 191 QIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQ 250
Query: 194 SFRANEALMLFDQMLM-EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
NEAL LF +M+ + PN L S +SACAQ LE G +H ++K + +
Sbjct: 251 LGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVT 310
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
LGT L+ MY K G++ A +F+ M ERN+ +WN+MI+GLA +G +EAL LF K++
Sbjct: 311 LGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVG 370
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
PN ITF+ +L+ C H+G I GR +F M +VYGI+P+++HYGCMVDLLGR G V EA
Sbjct: 371 PSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEA 430
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ +++M KP +WGAL+ AC+ HG +E+ E + K +I LEP++ G Y +L N++A A
Sbjct: 431 LDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAA 490
Query: 433 ESMKMQLEILLVQVLFAGLASAADILQNP 461
+ ++ +V+ L G +L+NP
Sbjct: 491 QRWD---DVAMVRDLEKG----RKVLKNP 512
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 237/409 (57%), Gaps = 6/409 (1%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
++ + +++HA MI + + +RL+ + GD A R+ + + N W
Sbjct: 492 AIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD---ARRVLDEMPERNVVSWTA 548
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + +A+ L++ M +G APN+ TF VL +C++ +QIH+ V K+
Sbjct: 549 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 608
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ + V + L+ Y+ + + AR+VFD + R + T +ISGYAQ EAL LF
Sbjct: 609 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFR 668
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
++ EG N VT ASVL+A + L+ G +VH V +L +L+ MY+K G
Sbjct: 669 RLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCG 728
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVL 324
+L ++ +FDSMPER + +WNAM+ G + HG EA++LF+ +++E ++ P+ +TF+ VL
Sbjct: 729 SLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 788
Query: 325 SACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
S C H G D G +IF M + G EP+IEHYGC+VDL GR G+V EA E IK+M ++P
Sbjct: 789 SGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEP 848
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG+LL AC+ H N+ + E V + ++ +E N G YV+LSN+YA A
Sbjct: 849 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASA 897
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 173/313 (55%), Gaps = 13/313 (4%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VL C + ++ +++H H+ K+ + +++ L+ Y+ L +AR+V DE+ R
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ WT MISGY+Q A+EAL LF +MLM G PN T A+VL++C S +LG ++H
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
V FE +G++L+ MY K G + +A+ +FD +PER++ + A+ISG A G EE
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY---- 356
ALDLFR+L++E + N +T+ VL+A +D GRQ+ + R K+ Y
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA-----KLPFYVVLQ 717
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAE--RVVKEIIA 413
++D+ +CG + + + M + V+ W A+L HG E E +++KE
Sbjct: 718 NSLIDMYSKCGSLTYSRRIFDSMPERT-VISWNAMLVGYSKHGLGREAVELFKLMKEENK 776
Query: 414 LEPNNHGVYVVLS 426
++P++ VLS
Sbjct: 777 VKPDSVTFLAVLS 789
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EAL+ +M ++G E SVL+ C + G++VH + +E L T L
Sbjct: 462 KEALL---EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRL 518
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ +Y K L A+ + D MPERN+ +W AMISG + G+A EAL LF ++ PN+
Sbjct: 519 IVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNE 578
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
TF VL++C + +GRQI + + E I ++D+ + GK+ EA +
Sbjct: 579 FTFATVLTSCTSSSGFQLGRQIHSLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFD 637
Query: 378 RMVWKPDVVMWGALLAA 394
+ + DVV A+++
Sbjct: 638 GLPER-DVVSCTAIISG 653
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 249/459 (54%), Gaps = 49/459 (10%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDL-SYATRLFNSI 75
L+ +A KC ++ QLKQ+HA I+ RI D +A + LL+ A S+ SYA +F +
Sbjct: 8 LTTVAQKCNTLTQLKQLHAH-ILRCRINDTPYALAPLLSVLATSNDASFFSYARSIFRHL 66
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC--------SN 127
+ N FM NT+IR +P A+ Y++M + G A N +TF ++KAC SN
Sbjct: 67 TNRNTFMHNTMIRGYLQCRSPLHAVSCYLSMLQNGVAVNNYTFPPLIKACIALLPSSPSN 126
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN-------------------- 167
+ + +H HV K GL D +VV+ + YSVS +++
Sbjct: 127 IVG----RLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSYKDVVLGTAM 182
Query: 168 -----------NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+AR+VFD++ R W+ M++ Y++ E L LF +M EG EPN
Sbjct: 183 VDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQNEGTEPNE 242
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
L +VL+ACA G L G VH + + E IL TALV MY+K G + A ++FD
Sbjct: 243 SILVTVLTACAHLGALTQGLWVHSYARRFHLESNPILATALVDMYSKCGCVESALSVFDC 302
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+ +++ WNAMISG A +G A ++L LFR++ + PN+ TFV VL+AC HA + G
Sbjct: 303 IVDKDAGAWNAMISGEALNGDAGKSLQLFRQMAASRTKPNETTFVAVLTACTHAKMVQQG 362
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM---VWKPDVVMWGALLA 393
+F M VYG+ P++EHY C++DLL R G V EAE+ ++ + D +WGALL
Sbjct: 363 LWLFEEMSSVYGVVPRMEHYACVIDLLSRAGMVEEAEKFMEEKMGGLTAGDANVWGALLN 422
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AC+ H NI V RV K+++ + + G +V+ N+Y EA
Sbjct: 423 ACRIHKNIHVGNRVWKKLVDMGVTDCGTHVLTYNIYREA 461
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 214/371 (57%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G + A +F+ + WN+++ + P+KAI ++ M G P T
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L AC+++ L K +H V + L D+ V+N L+ YS ++ A +F+ + R
Sbjct: 354 EALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
T W MI GYAQ+ R +EAL F +M G +P+S T+ SV+ A A+ + +H
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ + + TALV MY+K GA+ A+ LFD + +R++ TWNAMI G +HG
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
ALDLF K++K + PNDIT++ V+SAC H+G +D G + F SMK+ YG+EP ++HYG M
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G++ EA + I+ M P + ++GA ACK H NIEV E+ K++ L P+
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEG 653
Query: 420 GVYVVLSNMYA 430
G +V+L+N+YA
Sbjct: 654 GYHVLLANIYA 664
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 204/398 (51%), Gaps = 4/398 (1%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P ++L + C SM +L QI +I + +H ++L++ S G ++ A R+F I
Sbjct: 51 PAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSL--FSKYGSINEAARVFEPID 108
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+++T+++ A + + + A+ MR P + FT++LK C + L K+
Sbjct: 109 DKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKE 168
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
IH + + ++ + +V Y+ +++A ++FD + R L W T+I+G++Q+
Sbjct: 169 IHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGF 228
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
A +AL L +M EG P+S+TL +VL A A G L +G+ +H + GF + TA
Sbjct: 229 AKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTA 288
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L MY+K G++ A+ +FD M ++ + +WN+M+ G +G E+A+ +F K+ +E I P
Sbjct: 289 LADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPT 348
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+T + L AC G ++ G+ + + ++ + I ++ + +C +V A ++
Sbjct: 349 GVTIMEALHACADLGDLERGKFVHKFVDQL-NLGSDISVMNSLISMYSKCKRVDIASDIF 407
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
+ + V W A++ +G + A E+ +L
Sbjct: 408 NNLNGRTHVS-WNAMILGYAQNGRVSEALNCFSEMKSL 444
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 194/391 (49%), Gaps = 10/391 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH Q+I +S + FA + ++ A D +Y ++F+ + + WNT+I +
Sbjct: 167 KEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY--KMFDRMPERDLVSWNTIIAGFS 224
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ KA+ L + M+ G P+ T VL A ++V L K IH + ++G ++
Sbjct: 225 QNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVN 284
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ L YS + AR +FD + +T+ W +M+ GY Q+ +A+ +F++ML EG
Sbjct: 285 ISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEG 344
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P VT+ L ACA G LE G+ VH FV + +L+ MY+K + A
Sbjct: 345 IDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIAS 404
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+++ R +WNAMI G A +G EAL+ F +++ + P+ T V V+ A
Sbjct: 405 DIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELS 464
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ I G + R ++ I +VD+ +CG + A +L M+ V+ W A+
Sbjct: 465 VTRHAKWIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARKLFD-MISDRHVITWNAM 522
Query: 392 LAACKNHG----NIEVAERVVKEIIALEPNN 418
+ HG +++ +++ K A+EPN+
Sbjct: 523 IDGYGTHGLGRAALDLFDKMKKG--AVEPND 551
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 240/403 (59%), Gaps = 2/403 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+ LK++H I D A+ +A A + G L A R+F S+++ WN LI
Sbjct: 252 LRSLKELHGYSIRHGFQYDELVANGFVA--AYAKCGMLICAERVFYSMETKTVNSWNALI 309
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
A + +P KA+ LY+ M +G P+ T +L A ++++SL K++H V + GL+
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLE 369
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+D + L+ Y + ++AR +FD + ++ W MISGY+Q+ +AL+LF ++
Sbjct: 370 IDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKL 429
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+ +GF+P+ + + SVL AC+Q L LG++ H + + + + MY K+G +
Sbjct: 430 VSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCI 489
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+++++FD + +++A+WNA+I+ HG EE+++LF ++ K +P+ TF+G+L+ C
Sbjct: 490 KESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVC 549
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAG ++ G + F M+ +GIEPK+EHY C++D+LGR G++ +A L+ M +PD +
Sbjct: 550 SHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRV 609
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
W +LL+ C+N G +E+ + V ++++ LEP N YV LSN+YA
Sbjct: 610 WSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYA 652
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 176/356 (49%), Gaps = 9/356 (2%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTF 118
S G L+ A LF+ N WNT+I + +A L+ M+ + N+ T
Sbjct: 180 SKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTV 239
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
+L AC + L K++H + + G D V N V Y+ L A +VF +
Sbjct: 240 LNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMET 299
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+T+N W +I G AQ+ +AL L+ QM G P+ T+ S+L A A L G++V
Sbjct: 300 KTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV 359
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H FV G E+ + +G +L+ +Y G + A+ LFD M E++ +WNAMISG + +G
Sbjct: 360 HGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLP 419
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
E+AL LFRKL + P+DI V VL AC + +G++ + +E C
Sbjct: 420 EDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVF--VAC 477
Query: 359 -MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVK 409
+D+ + G + E+ + + K D+ W A++AA HG+ IE+ ER+ K
Sbjct: 478 STIDMYAKSGCIKESRSVFDGLKNK-DLASWNAIIAAYGVHGDGEESIELFERMRK 532
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 149/295 (50%), Gaps = 5/295 (1%)
Query: 109 TGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN 168
T F + TF V+KAC+ + IH V K GL LD+ V N L+ Y ++
Sbjct: 25 TEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDA 84
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM--EGFEPNSVTLASVLSAC 226
A +VF + R L W ++ISG++++ + + + +M+ EG P+ TL +VL C
Sbjct: 85 AVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVC 144
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A+ +++G ++H G + +LV MY+K G L +A+ LFD +N +WN
Sbjct: 145 AREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWN 204
Query: 287 AMISGLASHGHAEEALDLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
MI GL + G+ EA +LFR+++ +E I N++T + +L AC + +++ G R
Sbjct: 205 TMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIR 264
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+G + V +CG ++ AE + M K V W AL+ C +G+
Sbjct: 265 -HGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKT-VNSWNALIGGCAQNGD 317
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 256/463 (55%), Gaps = 47/463 (10%)
Query: 14 PIPPLSLLAD------KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
P PP S D +C ++ LKQ+HA +++ R LL F +L S L Y
Sbjct: 3 PAPPFSSHGDFVAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSC-LPY 61
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDK-------AIFLYMNMRRTGFAPNQHTFTF 120
A RLF++ SPN F+++ ++ A A++ + + A+FL M +RR APNQ +
Sbjct: 62 ARRLFDATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRM-LRRGRPAPNQFVYPL 120
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VL+A + + + IH H K G + L+ YS + +AR++FD + +R
Sbjct: 121 VLRAACAI-GVQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRN 179
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQM-------------------------------LM 209
+ WT ++SGYA++ + +A++LF++M +
Sbjct: 180 VVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVD 239
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EGF PN T++ +LSAC G L++G+ +H + G+ + L+ MY K G L +
Sbjct: 240 EGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLME 299
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
AK +FD+ +R + TWN++I+ LA HG +E A+ +F + E + P+++TFVG+L+AC H
Sbjct: 300 AKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTH 359
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
GF+D G + F M +GIEP+IEHYGC+VDLL R G+ +A I M +PD V+WG
Sbjct: 360 GGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWG 419
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+LL AC+ H ++E+AE ++ ++ L P+N V+L+N+Y+E
Sbjct: 420 SLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEG 462
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 231/402 (57%), Gaps = 4/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL-FNSIQSPNHFMWNTLIRAQ 90
+Q+H+ ++ D F + L+ + S DL R+ FN + + WN +I
Sbjct: 352 RQLHSSLMKMDMESDLFVSVGLVD---MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ +A+ L++ M + G NQ T + +LK+ + ++ ++ C+Q+H KSG D+
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 468
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
+VVN L+ Y S + +A ++F+E L +T+MI+ YAQ + EAL LF +M
Sbjct: 469 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM 528
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
+P+ +S+L+ACA E G+++HV + GF + G +LV+MY K G++ A
Sbjct: 529 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
F + ER I +W+AMI GLA HGH +AL LF ++ KE + PN IT V VL AC HA
Sbjct: 589 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 648
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + + F SM+ ++G +P EHY CM+DLLGR GK+ EA EL+ +M ++ + +WGA
Sbjct: 649 GLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 708
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LL A + H ++E+ R + + LEP G +V+L+N+YA A
Sbjct: 709 LLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASA 750
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 188/388 (48%), Gaps = 31/388 (7%)
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
+ F P +++ +L C +SL QIH H++KSGL D + N L+ YS
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFG 108
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
AR++ DE L W+ +ISGYAQ+ ALM F +M + G + N T +SVL AC+
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
L +G++VH V + GFE + LV MY K +K LFD +PERN+ +WNA
Sbjct: 169 IVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNA 228
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV- 346
+ S EA+ LF ++ I PN+ + +++AC G+ I G + ++
Sbjct: 229 LFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLG 288
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
Y +P + +VD+ + G + +A + ++ + +PD+V W A++A C H + E
Sbjct: 289 YDWDPFSAN--ALVDMYAKVGDLADAISVFEK-IKQPDIVSWNAVIAGCVLHEHHEQ--- 342
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAEAES--MKMQLEI-LLVQVLFAGLASAADILQNPDF 463
ALE +L M + S MKM +E L V V + S D+L++
Sbjct: 343 ------ALE--------LLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARM 388
Query: 464 ESPPTNLTPNRSTPFVLLNGNNTIPGWT 491
NL P + L+ N I G++
Sbjct: 389 ---AFNLLPEKD----LIAWNAIISGYS 409
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 155/302 (51%), Gaps = 4/302 (1%)
Query: 12 PLPIPPLSLLADKC--KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P + LL+ C KS+ QIHA + S D + L+ S YA
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINL--YSKCRXFGYAR 111
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+L + P+ W+ LI A + A+ + M G N+ TF+ VLKACS V+
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
L KQ+H V SG + D+ V N LV Y+ + +++++FDEI R + W + S
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
Y Q EA+ LF +M++ G +PN +L+S+++AC G+ +H ++ G++
Sbjct: 232 CYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
ALV MY K G LA A ++F+ + + +I +WNA+I+G H H E+AL+L +++
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351
Query: 310 KE 311
++
Sbjct: 352 RQ 353
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 191/428 (44%), Gaps = 41/428 (9%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+H +++S D F A+ L+ A + + RLF+ I N WN L
Sbjct: 177 KQVHGVVVVSGFEGDVFVANTLVVMYA--KCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+A+ L+ M +G PN+ + + ++ AC+ +R + K IH ++ K G D D
Sbjct: 235 QXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N LV Y+ DL +A VF++I+ + W +I+G +AL L QM
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM---- 350
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
++H + E + LV MY+K L A+
Sbjct: 351 -----------------------KRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 387
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F+ +PE+++ WNA+ISG + + EAL LF ++ KE I N T +L +
Sbjct: 388 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 447
Query: 332 FIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ V RQ+ G S+K G I ++D G+C V +AE + + D+V + +
Sbjct: 448 VVHVCRQVHGLSVKS--GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI-GDLVSFTS 504
Query: 391 LLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVL---SNMYAEAESMKMQLEIL--- 442
++ A +G E A ++ E+ + L+P+ +L +N+ A + ++ + IL
Sbjct: 505 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 564
Query: 443 LVQVLFAG 450
V +FAG
Sbjct: 565 FVLDIFAG 572
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 191/286 (66%)
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
DL N ++ Y++ ++ AR++FD +R W++MIS YA+S R+ EAL L+ +M
Sbjct: 53 DLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMH 112
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
P+ +TL SV+SAC+ G L +G +VH FV+ E+ LGTAL+ MY K G +
Sbjct: 113 AASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIE 172
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A+ +FD MPE+++ TW++MI GLA+HG E+L LF K+ E + PN +TFVGVL AC
Sbjct: 173 SAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACT 232
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G + G++ F SM V+GIEP +EHYGCMVDLLGR G V EA +LI+ M ++PD ++W
Sbjct: 233 HVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIW 292
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
ALL AC+ H N+E+AE + ++ L+P G YV+LSN+YA+A S
Sbjct: 293 RALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANS 338
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 128/252 (50%), Gaps = 5/252 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++ A +F+ + + F W+++I A A S +A+ L+ M P+ T V+
Sbjct: 68 GEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVV 127
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
ACS++ +L ++H V + ++LDL + L+ Y+ D+ +A++VFD + + +
Sbjct: 128 SACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQ 187
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK-VHVF 241
W++MI G A +E+L LF +M+ EG +PN VT VL AC G + G+K
Sbjct: 188 TWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSM 247
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGH--- 297
++ G E +V + ++G + +A+ L SM E + W A++ H +
Sbjct: 248 NEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEI 307
Query: 298 AEEALDLFRKLE 309
AEEA+ R L+
Sbjct: 308 AEEAMAKLRVLD 319
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 37/180 (20%)
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG---------------- 296
L ++ Y +A+A+ +FD MP R++ +WN MI G A G
Sbjct: 25 LCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRD 84
Query: 297 ---------------HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI-- 339
++EAL+L+R++ I+P+ IT V V+SAC G + VG ++
Sbjct: 85 AFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHR 144
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
F R IE ++ ++D+ +CG + A+ + RM K DV W +++ NHG
Sbjct: 145 FVESNR---IELDLKLGTALIDMYAKCGDIESAQRVFDRMPEK-DVQTWSSMIIGLANHG 200
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 255/466 (54%), Gaps = 45/466 (9%)
Query: 8 LRQPPLPI-----PPLSLLADKCKSMHQLKQIHAQMIISSRI----QDHFAASRLLAFCA 58
LR+ P+ PPL K +++ +IH ++S+ D F S L+A A
Sbjct: 106 LRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHG---LASKFGFFHADPFIQSALIAMYA 162
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
+ G + A LF+ + + WN +I + + + D + LY M+ +G P+
Sbjct: 163 --ACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIIL 220
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
VL AC++ +L+ K IH + +G + H+ LV Y+ ++ AR+V+D++ +
Sbjct: 221 CTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPS 280
Query: 179 RTLNV-------------------------------WTTMISGYAQSFRANEALMLFDQM 207
+ + V W+ MISGYA+S++ EAL LF++M
Sbjct: 281 KHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEM 340
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
P+ +T+ SV+SACA G L + +H + GF + AL+ MY K G L
Sbjct: 341 QRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNL 400
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
KA+ +F++MP +N+ +W++MI+ A HG A+ A+ LF +++++ I PN +TF+GVL AC
Sbjct: 401 VKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYAC 460
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAG ++ G++ F SM + I P+ EHYGCMVDL R + +A ELI+ M + P+V++
Sbjct: 461 SHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVII 520
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
WG+L++AC+NHG IE+ E ++ LEP++ G VVLSN+YA+ +
Sbjct: 521 WGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEK 566
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 227/442 (51%), Gaps = 39/442 (8%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS---GDLSYAT 69
+P P L CK++ +KQIHAQ++ S + +L+ C S L YA
Sbjct: 10 IPSPSEKGLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYAL 69
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
LF+ I +P N L+R + P+ + LY+++RR GF ++ +F +LKA S +
Sbjct: 70 SLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLS 129
Query: 130 SLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
+LN +IH SK G D + + L+ Y+ + +AR +FD++ +R + W MI
Sbjct: 130 ALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMI 189
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
GY+Q+ + L L+++M G EP+++ L +VLSACA +G L G+ +H F+K GF
Sbjct: 190 DGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFR 249
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMP------------------------------ 278
+G+ + T+LV+MY GA+ A+ ++D +P
Sbjct: 250 VGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRM 309
Query: 279 -ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
E+++ W+AMISG A EAL LF ++++ +IVP+ IT + V+SAC + G + +
Sbjct: 310 VEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAK 369
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
I + G + ++D+ +CG +++A E+ + M K +V+ W +++ A
Sbjct: 370 WIHTYADK-NGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAM 427
Query: 398 HGNIEVAERVVKEIIA--LEPN 417
HG+ + A + + +EPN
Sbjct: 428 HGDADSAIALFHRMKEQNIEPN 449
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 234/408 (57%), Gaps = 33/408 (8%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
+G L +A ++F+ + W T+I A + D+AI L+ +M + PN+ T +
Sbjct: 200 TGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIAL 259
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL----VRC------------------ 159
L ACS K +H H+ + + L+++N + V+C
Sbjct: 260 LSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDV 319
Query: 160 ---------YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-M 209
Y+ + DL +AR++FDE+ R + W MI+GY+Q+ + EAL LF M+ +
Sbjct: 320 FSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDV 379
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHV-FVKMRGFEMGAILGTALVHMYTKNGALA 268
G P TL VLSA Q GCLE+G+++H V G ++ IL A++ MY K G++
Sbjct: 380 VGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSID 439
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A LF SMPE+N+ +WN+MIS AS+GHA++AL LF ++ + P+ ITF+GVLSAC
Sbjct: 440 AAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACS 499
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
+ GF+ G+ F SM+ +G+EPK EHY CMVDLL R G + EA ELI RM + W
Sbjct: 500 YGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGW 559
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
GALL AC+ HGN+E+A+ ++++ L+P + G+Y +L+N+ A+ + K
Sbjct: 560 GALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWK 607
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 150/444 (33%), Positives = 236/444 (53%), Gaps = 35/444 (7%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P L+ C SM QLKQI A + + + F ASRLLAFCALS SGD+ YA +F+ +
Sbjct: 54 PTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTE 113
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
PN F WNT+I+ + +P + M R + +F F LKAC
Sbjct: 114 LPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMA 173
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H+ + K G D DL V N L++ Y + L ARQ+FDE + + WTTMI+GYA++
Sbjct: 174 VHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNW 233
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE-----MGA 251
+EA+ LF+ ML +PN VT+ ++LSAC+Q G E+G+ +H ++ + + A
Sbjct: 234 LDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNA 293
Query: 252 ILG--------------------------TALVHMYTKNGALAKAKALFDSMPERNIATW 285
+L T+L++ Y KNG L A+ LFD MPERNI +W
Sbjct: 294 MLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSW 353
Query: 286 NAMISGLASHGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
NAMI+G + + EAL+LF + + +VP + T V VLSA G +++G++I +
Sbjct: 354 NAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHV 413
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
GI+ + ++D+ +CG + A +L M K ++V W ++++A ++G+ + A
Sbjct: 414 NKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEK-NLVSWNSMISAYASYGHAKKA 472
Query: 405 ERVVKEII--ALEPNNHGVYVVLS 426
+ ++I L+P++ VLS
Sbjct: 473 LTLFDQMIGSGLKPDHITFIGVLS 496
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 231/402 (57%), Gaps = 4/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL-FNSIQSPNHFMWNTLIRAQ 90
+Q+H+ ++ D F + L+ + S DL R+ FN + + WN +I
Sbjct: 379 RQLHSSLMKMDMESDLFVSVGLVD---MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 435
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ +A+ L++ M + G NQ T + +LK+ + ++ ++ C+Q+H KSG D+
Sbjct: 436 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 495
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
+VVN L+ Y S + +A ++F+E L +T+MI+ YAQ + EAL LF +M
Sbjct: 496 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM 555
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
+P+ +S+L+ACA E G+++HV + GF + G +LV+MY K G++ A
Sbjct: 556 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 615
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
F + ER I +W+AMI GLA HGH +AL LF ++ KE + PN IT V VL AC HA
Sbjct: 616 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 675
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + + F SM+ ++G +P EHY CM+DLLGR GK+ EA EL+ +M ++ + +WGA
Sbjct: 676 GLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 735
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LL A + H ++E+ R + + LEP G +V+L+N+YA A
Sbjct: 736 LLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASA 777
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 197/385 (51%), Gaps = 6/385 (1%)
Query: 12 PLPIPPLSLLADKC--KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P + LL+ C KS+ QIHA + S D + L+ S + YA
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINL--YSKCRNFGYAR 111
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+L + P+ W+ LI A + A+ + M G N+ TF+ VLKACS V+
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
L KQ+H V SG + D+ V N LV Y+ + +++++FDEI R + W + S
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
Y Q EA+ LF +M++ G +PN +L+S+++AC G+ +H ++ G++
Sbjct: 232 CYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
ALV MY K G LA A ++F+ + + +I +WNA+I+G H H E+AL+L +++
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ I PN T L AC G ++GRQ+ S+ ++ +E + +VD+ +C +
Sbjct: 352 RSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKM-DMESDLFVSVGLVDMYSKC-DL 409
Query: 370 LEAEELIKRMVWKPDVVMWGALLAA 394
LE + ++ + D++ W A+++
Sbjct: 410 LEDARMAFNLLPEKDLIAWNAIISG 434
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 206/428 (48%), Gaps = 14/428 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+H +++S D F A+ L+ A + + RLF+ I N WN L
Sbjct: 177 KQVHGVVVVSGFEGDVFVANTLVVMYA--KCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+A+ L+ M +G PN+ + + ++ AC+ +R + K IH ++ K G D D
Sbjct: 235 QIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N LV Y+ DL +A VF++I+ + W +I+G +AL L QM G
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSG 354
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN TL+S L ACA G ELG ++H + E + LV MY+K L A+
Sbjct: 355 ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 414
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F+ +PE+++ WNA+ISG + + EAL LF ++ KE I N T +L +
Sbjct: 415 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 474
Query: 332 FIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ V RQ+ G S+K G I ++D G+C V +AE + + D+V + +
Sbjct: 475 VVHVCRQVHGLSVKS--GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI-GDLVSFTS 531
Query: 391 LLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVL---SNMYAEAESMKMQLEIL--- 442
++ A +G E A ++ E+ + L+P+ +L +N+ A + ++ + IL
Sbjct: 532 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 591
Query: 443 LVQVLFAG 450
V +FAG
Sbjct: 592 FVLDIFAG 599
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 196/401 (48%), Gaps = 30/401 (7%)
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
+ F P +++ +L C +SL QIH H++KSGL D + N L+ YS +
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFG 108
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
AR++ DE L W+ +ISGYAQ+ ALM F +M + G + N T +SVL AC+
Sbjct: 109 YARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
L +G++VH V + GFE + LV MY K +K LFD +PERN+ +WNA
Sbjct: 169 IVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNA 228
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV- 346
+ S EA+ LF ++ I PN+ + +++AC G+ I G + ++
Sbjct: 229 LFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLG 288
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
Y +P + +VD+ + G + +A + ++ + +PD+V W A++A C H + E A
Sbjct: 289 YDWDPFSAN--ALVDMYAKVGDLADAISVFEK-IKQPDIVSWNAVIAGCVLHEHHEQALE 345
Query: 407 VVKEII--ALEPNNHGVYVVLSNMYA-------------EAESMKMQLEI-LLVQVLFAG 450
++ ++ + PN ++ + S + A + MKM +E L V V
Sbjct: 346 LLGQMKRSGICPN---IFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVD 402
Query: 451 LASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGWT 491
+ S D+L++ NL P + L+ N I G++
Sbjct: 403 MYSKCDLLEDARM---AFNLLPEKD----LIAWNAIISGYS 436
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 226/376 (60%), Gaps = 16/376 (4%)
Query: 70 RLFNSIQSPNHFMWNTLIRAQA-SSLNPDKAIFLY---MNMRRTGFAPNQHTFTFVLKAC 125
++ +I +PN F WN LI++ + S+L+ KAI LY + + P++HT+ FVLKAC
Sbjct: 36 QILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKAC 95
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN-RTLNVW 184
+ + SL KQ+H HV K G +LD ++ N L+ Y+ L AR+VFD + R + W
Sbjct: 96 AYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSW 155
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
MI YA+ + L++F +M M+ +EP+ T+ SV+ AC G L LG VH FV
Sbjct: 156 NVMIDSYAKVGDYDIVLIMFCEM-MKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLK 214
Query: 245 R---GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ ++ T LV MY K G+L AK +F+ M R++++WN++I G A HG A+ A
Sbjct: 215 KCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAA 274
Query: 302 LDLFRKLEK-EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
LD F ++ K E+IVPN ITFVGVLSAC H+G +D G F M + Y +EP + HYGC+V
Sbjct: 275 LDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLV 334
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC-KNHGNIEVAERVVKEIIALEPNNH 419
DL R G + EA ++ M KPD V+W +LL AC K H ++E++E + K+I E N
Sbjct: 335 DLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQI--FESNGS 392
Query: 420 ---GVYVVLSNMYAEA 432
G YV+LS +YA A
Sbjct: 393 VCGGAYVLLSKVYASA 408
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 255/477 (53%), Gaps = 72/477 (15%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++++ + +HA ++I + + A++L++F + G LS A +LF+ I + N W
Sbjct: 817 RALYRGRALHAHLVIIGLARLTYFAAKLMSF--YTECGQLSNARKLFDKIPNTNIRRWIV 874
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT------ 139
L A A ++A+ + M++ G PNQ +LKAC ++ + +HT
Sbjct: 875 LTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNS 934
Query: 140 -------------------HVSKSG------LDLDLHVVNCLVRCYS------------- 161
HV K+ +D DL V+N +V Y+
Sbjct: 935 FESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQ 994
Query: 162 -----------VS--------SDLNNARQVFDEIRNRTLN-------VWTTMISGYAQSF 195
VS S + + V + R T N WT++ISG+ Q+F
Sbjct: 995 KMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNF 1054
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
+E F +ML +GF P+SVT++S+L AC L G+++H + + G E + +
Sbjct: 1055 HNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRS 1114
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
ALV MY K G +++AK LF MPERN TWN++I G A+HG+ EA++LF ++E+
Sbjct: 1115 ALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKL 1174
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
+ +TF VL+AC HAG +++G +F M+ Y IEP++EHY CMVDLLGR GK+ EA +L
Sbjct: 1175 DHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDL 1234
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
IK M +PD +WGALL AC+NHGNIE+AE + + LEP + G ++LSN+YA+A
Sbjct: 1235 IKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADA 1291
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 217/406 (53%), Gaps = 3/406 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ + KQ+HA ++ + + + LL S G + A +F S++ N W
Sbjct: 229 AIQEGKQLHAHVVKMQYLSETAVGNALLTL--YSKCGMMEEAEIVFESLRQRNIISWTAS 286
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I + KA+ + MR +G PN+ TF+ VL +C V+ + HT V K G+
Sbjct: 287 INGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGM 346
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMISGYAQSFRANEALMLFD 205
+ V ++ YS +++ A + F ++ NV W +I+GY + + +A+ F
Sbjct: 347 ASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFC 406
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M+ E N T +++ AC+ L ++H + E + ++L+ YT+ G
Sbjct: 407 RMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCG 466
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+L A +F + + ++ +WN++I + +G +A+ L RK+ +E P TF+ VLS
Sbjct: 467 SLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLS 526
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H+G + G++ F SM + Y I+P+ H CMVD+LGR G++ A + IK++ KP
Sbjct: 527 ACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTA 586
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+W LLAAC+ + N+++AE V ++I+ LEPN+ VYV LSNMYAE
Sbjct: 587 SIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAE 632
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 180/371 (48%), Gaps = 11/371 (2%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D F + L+ A G++ A R+++ + S + N LI A A + +A ++M
Sbjct: 147 DEFVCTSLIDMYA--KCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQ 204
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
+ G PN +T++ +L C + ++ KQ+H HV K + V N L+ YS
Sbjct: 205 IGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGM 264
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ A VF+ +R R + WT I+G+ Q +AL F M G EPN T + VL++
Sbjct: 265 MEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLAS 324
Query: 226 CAQSGCLE---LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE-RN 281
C GC++ G H V +G G +GTA++ MY+ G + +A+ F M +
Sbjct: 325 C---GCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAAS 381
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+WNA+I+G + E+A++ F ++ KE + N+ T+ + AC + QI
Sbjct: 382 NVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHS 441
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
+ + +E + +++ +CG + A ++ + + DVV W +++ A +G+
Sbjct: 442 RLIKS-NVESNLHVASSLIEAYTQCGSLENAVQVFTQ-ISDADVVSWNSIIKAYSQNGDP 499
Query: 402 EVAERVVKEII 412
A +++++I
Sbjct: 500 WKAIFLLRKMI 510
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 197/434 (45%), Gaps = 46/434 (10%)
Query: 5 CSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
C L P P P+ +L K++ ++ M SRI D + + L A A+ S +
Sbjct: 728 CFGLLSLP-PGKPIRVL----KNLRVCLDCYSTMKYISRITDRYIPTPLAAAAAMQSLIN 782
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
+ R++ +I + F Q+SS KAI +Y
Sbjct: 783 RANVYRVYRNISTHRTF--------QSSSDTYAKAIDMY--------------------- 813
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
+ R+L + +H H+ GL + L+ Y+ L+NAR++FD+I N + W
Sbjct: 814 -ARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRW 872
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+ A+ EAL F +M EG PN L S+L AC GE +H +
Sbjct: 873 IVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK 932
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
FE A + +AL++MY+K G + KA +FD + ++++ NAM+SG A HG EALBL
Sbjct: 933 NSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBL 992
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
+K+++ + PN +++ +++ G + ++F M G+EP + + ++
Sbjct: 993 VQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMT-ANGVEPDVVSWTSVISGFV 1051
Query: 365 RCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEVAERV--VKEIIALEPNNH 419
+ E + K M+ + P V +LL AC N N+ + + +I +E +
Sbjct: 1052 QNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKD-- 1109
Query: 420 GVYV--VLSNMYAE 431
VYV L +MYA+
Sbjct: 1110 -VYVRSALVDMYAK 1122
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 158/309 (51%), Gaps = 8/309 (2%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA 169
GF Q+ F+ L C + ++ H V K GL D V L+ Y+ ++++A
Sbjct: 109 GFPHRQYVFS-ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
+V+D++ + +IS YA++ +A +F Q+ G PN T +++L+ C
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
++ G+++H V + +G AL+ +Y+K G + +A+ +F+S+ +RNI +W A I
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASI 287
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC-CHAGFIDVGRQIFGSMKRVYG 348
+G HG ++AL F + + I PN+ TF VL++C C FID GR +F + G
Sbjct: 288 NGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFID-GR-MFHTQVIKKG 345
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE--- 405
+ + ++D+ G++ EAE+ K+M V W AL+A + IE A
Sbjct: 346 MASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAF 405
Query: 406 -RVVKEIIA 413
R+VKE +A
Sbjct: 406 CRMVKEDVA 414
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 218/373 (58%), Gaps = 3/373 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
GDL A +F +I + + WN++ +A + A LY M R F P+ TF
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFIN 261
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+ +C N +L + IH+H G D D+ +N + YS S D +AR +FD + +RT
Sbjct: 262 LAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRT 321
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
WT MISGYA+ +EAL LF M+ G +P+ VTL S++S C + G LE G+ +
Sbjct: 322 CVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA 381
Query: 241 FVKMRGFEM-GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ G + ++ AL+ MY+K G++ +A+ +FD+ PE+ + TW MI+G A +G
Sbjct: 382 RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFL 441
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL LF K+ PN ITF+ VL AC H+G ++ G + F MK+VY I P ++HY CM
Sbjct: 442 EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCM 501
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR GK+ EA ELI+ M KPD +WGALL ACK H N+++AE+ + + LEP
Sbjct: 502 VDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMA 561
Query: 420 GVYVVLSNMYAEA 432
YV ++N+YA A
Sbjct: 562 APYVEMANIYAAA 574
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 187/401 (46%), Gaps = 45/401 (11%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN IR + +P +++ L+ M+R GF PN TF FV KAC+ + + CC+ +H H+
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 143 KSGLDLDLHV----VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
KS D+ V V+ V+C SV + A +VF+ + R W M+SG+ QS +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSV----DYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
+A LF +M + P+SVT+ +++ + + L+L E +H G ++ + +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 259 HMYTKNGALAKAKALFDSMP--ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
Y K G L AK +F+++ +R + +WN+M + G A +A L+ + +E+ P+
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 317 DITFVGVLSACCHAGFIDVGRQI------FGSMKRVYGIEPKIEHYG-----CMVDLL-- 363
TF+ + ++C + + GR I G+ + + I I Y C LL
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 364 -----------------GRCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEV 403
G + EA L M+ KPD+V +L++ C G++E
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 404 AERV--VKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
+ + +I + +N + L +MY++ S+ +I
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 416
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 193/422 (45%), Gaps = 26/422 (6%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ +HA +I S D F + + +S D YA ++F + + WN ++
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVD--YAAKVFERMPERDATTWNAMLSGFC 129
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S + DKA L+ MR P+ T ++++ S +SL + +H + G+D+ +
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
V N + Y DL++A+ VF+ I +RT+ W +M Y+ A +A L+ ML
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
E F+P+ T ++ ++C L G +H G + + MY+K+
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A+ LFD M R +W MISG A G +EAL LF + K P+ +T + ++S C
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC-- 367
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGC----------MVDLLGRCGKVLEAEELIKRM 379
G+ FGS++ I+ + + YGC ++D+ +CG + EA ++
Sbjct: 368 ------GK--FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN-NHGVYVVLSNMYAEAESMKMQ 438
K VV W ++A +G A ++ ++I L+ NH ++ + A + S++
Sbjct: 420 PEKT-VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 439 LE 440
E
Sbjct: 479 WE 480
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
++N W I E+L+LF +M GFEPN+ T V ACA+ + E VH
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ F +GTA V M+ K ++ A +F+ MPER+ TWNAM+SG GH +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+A LFR++ +I P+ +T + ++ + + + + R+ G++ ++
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL-GVDVQVTVANTW 194
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPD--VVMWGALLAA 394
+ G+CG L++ +L+ + + D VV W ++ A
Sbjct: 195 ISTYGKCGD-LDSAKLVFEAIDRGDRTVVSWNSMFKA 230
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 247/451 (54%), Gaps = 34/451 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P +SLL D + +++QIHA++ + ++D + + ALS L YA ++ +
Sbjct: 16 PAISLL-DSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRS 74
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNC 133
P F N++IRA S P+K+ Y + +G P+ +T F+++AC+ +
Sbjct: 75 DKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRET 134
Query: 134 CKQIHTHVSKSGLDLDLHV----------VNCLVRCYSV--------------------- 162
Q+H + G D D HV + CL C+ V
Sbjct: 135 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACAR 194
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
D+ AR++F+ + + W MISGYAQ + EAL LF M +EG + N V++ SV
Sbjct: 195 CGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISV 254
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSAC Q G L+ G H +++ ++ LGT LV +Y K G + KA +F M E+N+
Sbjct: 255 LSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNV 314
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TW++ ++GLA +G E+ L LF ++++ + PN +TFV VL C GF+D G++ F S
Sbjct: 315 YTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDS 374
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+ +GIEP+++HYGC+VDL R G++ +A +I++M K +W +LL A + + N+E
Sbjct: 375 MRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLE 434
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ K+++ LE +NHG YV+LSN+YA+++
Sbjct: 435 LGVLASKKMLELETSNHGAYVLLSNIYADSD 465
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 180/327 (55%)
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
M GF PN+ TF ++ AC + + IH V KSG+ ++ VVN L+ Y +
Sbjct: 626 MMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKT 685
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
DL ++ ++F+++ + L W TMI + Q+ A E L F+ G +P+ T +VL
Sbjct: 686 GDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVL 745
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
C G + L + +H + GF + TAL+ +Y K G L + +F + +
Sbjct: 746 RVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSM 805
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
W AM++ A+HG+ +A+ F + + P+ +TF +L+AC H+G ++ GR F +M
Sbjct: 806 AWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETM 865
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ Y IEP+++HY CMVDL+GR G + +A LIK M +P +WGALL AC+ + + ++
Sbjct: 866 SKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQL 925
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYA 430
+ K + LEP + Y++LSN+Y+
Sbjct: 926 GTKAAKRLFELEPRDGRNYIMLSNIYS 952
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 8/233 (3%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTF 120
+GDL + +LF + N WNT+I + ++ + Y NM R G P+Q TF
Sbjct: 685 TGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGL-AYFNMSRWVGLKPDQATFLA 743
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VL+ C ++ + + IH + G + + + L+ Y+ L ++ VF EI +
Sbjct: 744 VLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPD 803
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
WT M++ YA +A+ F+ M+ G P+ VT +L+AC+ SG +E G +
Sbjct: 804 SMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGR--YY 861
Query: 241 FVKM-RGFEMGAILG--TALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMI 289
F M + + + L + +V + ++G L A L MP E + W A++
Sbjct: 862 FETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALL 914
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 158/400 (39%), Positives = 224/400 (56%), Gaps = 9/400 (2%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS-SLNPDKAIFLY 103
DH S + + L G A ++FN I S + WN +++A +N + L
Sbjct: 162 HDHTVHSLITIYSYLDDPG---AARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLR 218
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
++ PN T VL AC + L + + +G++ D V + LV Y
Sbjct: 219 DMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKC 278
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
++ AR+VFD I ++ + W MI+GYAQ+ +NEA+ LF M G P+ +TLA VL
Sbjct: 279 GEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVL 338
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SAC+ G LELG ++ + RG +GTALV MY K G L KA +F M +N+A
Sbjct: 339 SACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVA 398
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
+WNA+I GLA +G +EA+ F + E + P+DITF+GVLSAC HAG + G++ F S
Sbjct: 399 SWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNS 458
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ + I PKIEHY CMVDLL R G + E + I+++ K D VM GALLAAC+ N+E
Sbjct: 459 LTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKNVE 518
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEA----ESMKMQ 438
+ ERV+ II LEP N YVV S +YA + +S KM+
Sbjct: 519 IGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMR 558
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 146/263 (55%), Gaps = 3/263 (1%)
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + K L+ H V+ L+ YS D AR+VF+ I +R + W M+ Y +
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 198 NEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
E + M+ +G PN+VTLA VL+AC G L LG V + K G E +++G+A
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSA 270
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
LV MY K G +A+A+ +FDS+ ++++ WNAMI+G A +G + EA+ LF ++K + P+
Sbjct: 271 LVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPD 330
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
IT GVLSAC G +++G ++ G G+ + +VD+ +CG + +A E+
Sbjct: 331 KITLAGVLSACSAVGALELGSELDG-YASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVF 389
Query: 377 KRMVWKPDVVMWGALLAACKNHG 399
++M K +V W AL+ +G
Sbjct: 390 RKMRCK-NVASWNALICGLAFNG 411
>gi|449506393|ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 614
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 234/421 (55%), Gaps = 40/421 (9%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C ++ +L QIHA ++ ++ +++H P+ F WN
Sbjct: 204 CTNVLELYQIHAHVLRTNMLENH------------------------------PSSFYWN 233
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+IR+ P A+F+Y+ M + G P+ +T V KA S + + Q+H+ +
Sbjct: 234 IIIRSYTRLEVPRIALFVYIAMLQAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRL 293
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G + D + + L+ YS DL A +VF++ NR L W +I+G +Q RA EA+ +F
Sbjct: 294 GFEFDQYSESGLISLYSKIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMF 353
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV---KMRGFEMGAILGTALVHMY 261
++ G EP+ T+ SV SAC G LEL ++H FV K+ G + ++ +L+ MY
Sbjct: 354 IKLRQSGLEPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTG-KSNILMLNSLIDMY 412
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + A +F +M RN+++W ++I G A HG ++AL+ F+ + + + PN +TFV
Sbjct: 413 GKCGRMDLAMKVFSNMGHRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFV 472
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVLSAC H G I+ G+ F MK VYG +P++ HYGCMVDLL + G + EA +I+ M
Sbjct: 473 GVLSACVHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPM 532
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESM 435
K + ++WG L+ C+ HGN+E+ E K + LEP N GVYVVLSN+YA EA+ M
Sbjct: 533 KANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKM 592
Query: 436 K 436
+
Sbjct: 593 R 593
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 171/421 (40%), Positives = 248/421 (58%), Gaps = 15/421 (3%)
Query: 21 LADKCKSMHQLKQIHAQMIISS--RIQDHFAASRLLAFCALSSSGDLS--YATRLFNSIQ 76
L +C + L+ HA + R+ FA S+LLA CA +S+ ++ YA LF+ I
Sbjct: 26 LVRRCPGLRALRGAHAHFLRLRLPRLTYAFALSKLLASCAAASATTVASSYARALFDQIP 85
Query: 77 SPNHFMWNTLIRA-----QASSLNPDKAIFLYMNMRRTGF-APNQHTFTFVLKACSNVRS 130
P F +N+LIRA +S+ LY M G APN T FVLKAC+ +
Sbjct: 86 EPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFVLKACT---A 142
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD-EIRNRTLNVWTTMIS 189
L +Q+H GL+ +V L+ Y+ ++ AR VFD + ++ L W++MI
Sbjct: 143 LGEGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVEDKNLVAWSSMIG 202
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY++ NEAL LF M G P+ VT+ SV+SACA++G L+LG+ VH F+ +G +
Sbjct: 203 GYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHAFIDRKGITV 262
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
L TAL+ MY K G + +AK++FDSM ER+ W+AMI GLA HG AE+AL LF ++
Sbjct: 263 DLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRML 322
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ ++ PN++TFVGVLSAC H+G +D GR+ + +M+ + GIE +E+YGCMVDLL R G +
Sbjct: 323 QLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQEL-GIEASMENYGCMVDLLCRSGLL 381
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EA + M P+ V+W LL A K+ I++ E + + LEP N YV+LSN+Y
Sbjct: 382 DEAFSFVTGMPISPNSVIWRNLLVASKSSNRIDIVELASRRLFELEPQNPENYVLLSNLY 441
Query: 430 A 430
A
Sbjct: 442 A 442
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 245/422 (58%), Gaps = 8/422 (1%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L A + S+ +H ++ QD F A++L+ S + A ++F+ +
Sbjct: 75 LILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINM--FSELDTVDNARKVFDKTRK 132
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN----VRSLNC 133
++WN L RA A + + + LY M G + ++ T+T++LKAC V L
Sbjct: 133 RTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQK 192
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
K+IH H+ + G +HV+ L+ Y+ ++ A VFDE+ + + W+ MI+ YA+
Sbjct: 193 GKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAK 252
Query: 194 SFRANEALMLFDQMLMEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
+ + EAL LF +M++ + PNSVT+ SVL ACA LE G+ +H ++ RG +
Sbjct: 253 NGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSIL 312
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+ +AL+ MY + G L + +FD M ++++ WN++IS HG+ +A+ +F ++
Sbjct: 313 PVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDH 372
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
P+ I+F+ VL AC H G ++ G+++F SM + +GI+P +EHY CMVDLLGR ++ E
Sbjct: 373 GFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDE 432
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
A ++I+ + +P +WG+LL AC+ H ++E+AER K + LEP N G YV+L+++YAE
Sbjct: 433 AAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAE 492
Query: 432 AE 433
AE
Sbjct: 493 AE 494
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 184/358 (51%), Gaps = 13/358 (3%)
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
S+ LS ++ FN PN N LI++ N +A++L + P Q T
Sbjct: 20 STSKLSVSSFSFNPSTPPNSNN-NHLIQSLCKQGNLKQALYLLSHESN----PTQQTCEL 74
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
++ + + SL+ +H + G D D + L+ +S ++NAR+VFD+ R RT
Sbjct: 75 LILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRT 134
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC----LELGE 236
+ VW + A + R N+ L L+ +M M G + T +L AC S C L+ G+
Sbjct: 135 IYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGK 194
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++H + G+ + T L+ MY + G ++ A A+FD MP +N+ +W+AMI+ A +G
Sbjct: 195 EIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNG 254
Query: 297 HAEEALDLFRK--LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
EAL+LFR+ L VPN +T V VL AC ++ G+ I + R G++ +
Sbjct: 255 KPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILR-RGLDSILP 313
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
++ + RCGK LE+ +LI + K DVV+W +L+++ HG A ++ +E+I
Sbjct: 314 VISALITMYARCGK-LESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMI 370
>gi|225451344|ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera]
gi|298204853|emb|CBI34160.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/437 (36%), Positives = 245/437 (56%), Gaps = 33/437 (7%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
+LL K S+H +KQ+HA +I ++ A + +CA SS YA F ++SP
Sbjct: 16 TLLHFKPNSIHHIKQLHAHLITNAVSSPPLLAKLIHHYCAFSSP---HYAYTFFIHLRSP 72
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMN-MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
N F++NTLI+ L P +I ++ + + R + T+ F L AC+ SL +QI
Sbjct: 73 NLFLFNTLIKC----LPPSSSILVFADWVSREALVFDDFTYIFALGACARSPSLWEGRQI 128
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS--- 194
H + K G+ ++ V + Y+ ++D+ AR VFDE+R R+ W MI+GY
Sbjct: 129 HARILKQGVWSNVLVQTTAIHFYANNNDVALARLVFDEMRKRSSVTWNAMITGYCSQRGK 188
Query: 195 --FRANEALMLFDQMLME--GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
A +AL+LF ML++ G +P T+ VLSA +Q G LE G VH +++
Sbjct: 189 VVCYARDALVLFRAMLVDACGVKPTDTTMVCVLSAASQLGVLETGVGVHGYIEKTVLAPA 248
Query: 251 --AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+GT LV MY+K G L A +F M ERN+ TW AMI+GLA HG +EAL+L ++
Sbjct: 249 NDVFVGTGLVDMYSKCGCLGSALCIFWGMKERNVLTWTAMITGLARHGRGKEALELLDEM 308
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ PN +TF + SACCHAG ++ G Q+F SM+ +G+ P I+HYGC+VDLLGR G
Sbjct: 309 VAYGVKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYGCIVDLLGRAGH 368
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK------------EIIALEP 416
+ EA + ++ M +PD ++W +LL+ACK H ++ + E V K +++A
Sbjct: 369 LKEAYDFVRGMPVEPDAILWRSLLSACKVHRDVVMGEEVGKLLLQLQPQQSFADLVAASE 428
Query: 417 NNHGVYVVLSNMYAEAE 433
+ ++ LSN+YA AE
Sbjct: 429 D----FIALSNVYASAE 441
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 230/399 (57%), Gaps = 2/399 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H+ +I D F L+ S + A +F + + WN +I +
Sbjct: 232 RQLHSSLIKMDMGSDSFLGVGLIDM--YSKCNSMDDARLVFKLMPERDMIAWNAVISGHS 289
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ ++A L+ M G NQ T + VLK+ + +++ C+QIH KSG + D +
Sbjct: 290 QNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNY 349
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
VVN L+ Y + +A +VF+E L ++T++++ YAQ + EAL L+ +M G
Sbjct: 350 VVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRG 409
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+S +S+L+ACA E G++VHV + GF G +LV+MY K G++ A
Sbjct: 410 IKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDAS 469
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F +P R I +W+AMI GLA HG+ +EAL LF+++ K + PN IT V VL AC HAG
Sbjct: 470 CAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAG 529
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ + F SMK ++GIEP EHY CM+DLLGR GK+ A EL+ +M ++ + ++WGAL
Sbjct: 530 LVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGAL 589
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L A + H NI++ E+ + ++ALEP G +V+L+N+YA
Sbjct: 590 LGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYA 628
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M G N+ F VLKAC+ + L KQ+H V +G D D V N LV Y+
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+AR +FD I +R++ W + S Y S EA+ LF M++ G PN +L+S+++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C G K+H ++ G++ A ALV MY K G L A ++FD + + +I +W
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
NA+I+G H + AL+L R++ K + PN T L AC ++GRQ+ S+ +
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ G ++D+ +C + +A L+ +++ + D++ W A+++
Sbjct: 241 MDMGSDSFLGVG-LIDMYSKCNSMDDA-RLVFKLMPERDMIAWNAVISG 287
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 186/386 (48%), Gaps = 16/386 (4%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+H ++++ D F A+ L+ A G A LF++I + WN L
Sbjct: 30 KQVHGIVVVTGFDSDEFVANSLVILYA--KCGGFGDARSLFDAIPDRSVVSWNALFSCYV 87
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S +A+ L+ +M +G PN+ + + ++ C+ + ++IH ++ K G D D
Sbjct: 88 HSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAF 147
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N LV Y+ L +A VFDEI + W +I+G + AL L +M G
Sbjct: 148 SANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSG 207
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHV-FVKMRGFEMGA--ILGTALVHMYTKNGALA 268
PN TL+S L ACA ELG ++H +KM +MG+ LG L+ MY+K ++
Sbjct: 208 MCPNMFTLSSALKACAGMALRELGRQLHSSLIKM---DMGSDSFLGVGLIDMYSKCNSMD 264
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A+ +F MPER++ WNA+ISG + + EEA LF + E I N T VL +
Sbjct: 265 DARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIA 324
Query: 329 HAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP--DV 385
+ RQI S+K + + + ++D G+CG V +A + + P D+
Sbjct: 325 ALQANYMCRQIHALSLKSGFEFDNYV--VNSLIDTYGKCGHVEDATRVFEE---SPIVDL 379
Query: 386 VMWGALLAACKNHGNIEVAERVVKEI 411
V++ +L+ A G E A R+ E+
Sbjct: 380 VLFTSLVTAYAQDGQGEEALRLYLEM 405
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 199/421 (47%), Gaps = 11/421 (2%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
Q ++IH +I D F+A+ L+ A G L A+ +F+ I P+ WN +I
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYA--KVGILEDASSVFDEIAKPDIVSWNAIIAG 186
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+A+ L M ++G PN T + LKAC+ + +Q+H+ + K + D
Sbjct: 187 CVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSD 246
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+ L+ YS + +++AR VF + R + W +ISG++Q+ EA LF M
Sbjct: 247 SFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHT 306
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
EG N TL++VL + A + ++H GFE + +L+ Y K G +
Sbjct: 307 EGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVED 366
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A +F+ P ++ + ++++ A G EEAL L+ +++ I P+ +L+AC
Sbjct: 367 ATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACAS 426
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ G+Q+ + + +G I +V++ +CG + +A R+ + +V W
Sbjct: 427 LSAYEQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-GIVSWS 484
Query: 390 ALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVL-----SNMYAEAESMKMQLEIL 442
A++ HG + A ++ K++ + + PN+ + VL + + AEA+ ++IL
Sbjct: 485 AMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKIL 544
Query: 443 L 443
Sbjct: 545 F 545
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 245/437 (56%), Gaps = 38/437 (8%)
Query: 30 QLKQIHAQMIISSRIQDH--FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
QL QI AQ+I + + H A +L+ CA ++ +L +A +F + +PN F WN +I
Sbjct: 26 QLLQIQAQLITNPPLSLHPNLIAVKLIGACA--ANANLYHAQLIFAQLPNPNVFSWNAII 83
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPN--QHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+A + + A+ + APN ++ +T ++KAC+ + ++ ++H V KSG
Sbjct: 84 KAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSG 143
Query: 146 LDLDLHV-------------------------------VNCLVRCYSVSSDLNNARQVFD 174
LD ++H+ N +V Y + DL +AR+VFD
Sbjct: 144 LDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFD 203
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLE 233
++ R + W MI GY Q+ + ++A+ +F +M + G P+ VTL SVLSACA G L+
Sbjct: 204 QMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALD 263
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G + FV RG + LG AL+ MY K G + +A+ +FD M ER++ +W+ MI G
Sbjct: 264 FGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSG 323
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+HG A+EA + K+ + + PN++TF+G+LSAC HAG +D G ++F M + Y I PK+
Sbjct: 324 THGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKV 383
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
HYGC++DLL R G++ EAE+LI M +P+V++WGALL C+ H + ERV + ++
Sbjct: 384 GHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLE 443
Query: 414 LEPNNHGVYVVLSNMYA 430
L+ G YV ++ A
Sbjct: 444 LDSEYTGSYVYIAGAKA 460
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 233/392 (59%), Gaps = 10/392 (2%)
Query: 48 FAASRLLAFCALSSSGDL----SYATRLFNSIQSPNHFMWNTLIRAQASSLNPD---KAI 100
FA S+LLA + SSS SYA LF+ I P F +N+LIRA +S+ +
Sbjct: 56 FALSKLLASSSSSSSSSCGAAPSYARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTV 115
Query: 101 FLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC 159
+Y M R G PN T F LKACS V +L +Q+H+ + GL+ +V L+
Sbjct: 116 LVYRRMLRAGSPLPNSFTLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNL 175
Query: 160 YSVSSDLNNARQVFD-EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVT 218
Y+ ++ AR VFD + ++ L W+ MI GY++ NEAL LF +M P+ VT
Sbjct: 176 YAKCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVT 235
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
+ SV+SACA++G L+LG VH F+ +G + L TAL+ MY K G + +AK +FD+M
Sbjct: 236 MVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMA 295
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
ER+ W+AMI GLA HG E AL LF ++ + ++ PN++TF+GVLSAC H+G ++ GR+
Sbjct: 296 ERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRR 355
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ +M+ + GI+P +E+YGCMVDL R + EA + M P+ V+W LL A KN
Sbjct: 356 YWSTMQEL-GIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNS 414
Query: 399 GNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
++ + K+++ LEP N YV+LSN+YA
Sbjct: 415 NRFDIVQSASKKLLELEPCNPENYVLLSNLYA 446
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 215/374 (57%), Gaps = 1/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+L+ A + F + W +LI A D AI L+ M G +P+ ++ T
Sbjct: 700 SKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMT 759
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
VL AC+ SL+ + +H ++ K+ + L L V N L+ Y+ + A VF +I +
Sbjct: 760 SVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK 819
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W TMI GY+++ NEAL LF +M E P+ +T+A +L AC LE+G +H
Sbjct: 820 DIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIH 878
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ G+ + AL+ MY K G+L A+ LFD +PE+++ TW MISG HG
Sbjct: 879 GCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGN 938
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA+ F+K+ I P++ITF +L AC H+G ++ G F SM +EPK+EHY CM
Sbjct: 939 EAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACM 998
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R G + +A LI+ M KPD +WGALL C+ H ++E+AE+V + + LEP+N
Sbjct: 999 VDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNA 1058
Query: 420 GVYVVLSNMYAEAE 433
G YV+L+N+YAEAE
Sbjct: 1059 GYYVLLANIYAEAE 1072
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 185/358 (51%), Gaps = 5/358 (1%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
SG++ A +LF+ + + WN++I + A+ ++ M + T
Sbjct: 601 SGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNS 660
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
+ AC+NV SL+ + +H K+ ++ N L+ YS +LN+A Q F+++ +T+
Sbjct: 661 VAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTV 720
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
WT++I+ Y + ++A+ LF +M +G P+ ++ SVL ACA L+ G VH +
Sbjct: 721 VSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNY 780
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
++ + + AL+ MY K G++ +A +F +P ++I +WN MI G + + EA
Sbjct: 781 IRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEA 840
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L LF +++KE P+ IT +L AC +++GR I G + R G ++ ++D
Sbjct: 841 LKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILR-NGYSSELHVANALID 898
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH--GNIEVAERVVKEIIALEPN 417
+ +CG ++ A L+ M+ + D++ W +++ C H GN +A I ++P+
Sbjct: 899 MYVKCGSLVHA-RLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPD 955
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 191/381 (50%), Gaps = 12/381 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSR---IQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
L L A+ K + + K +H+ +ISS I+ A + + S G L R+F+
Sbjct: 458 LQLCAEH-KCLQEGKMVHS--VISSNGIPIEGVLGAKLVFMYV---SCGALREGRRIFDH 511
Query: 75 IQSPNH-FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
I S N F+WN ++ A + ++I+L+ M++ G N +TF+ +LK + + +
Sbjct: 512 ILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGE 571
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
CK+IH V K G VVN L+ Y S ++++A ++FDE+ +R + W +MISG
Sbjct: 572 CKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVM 631
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ ++ AL F QML+ + TL + ++ACA G L LG +H F +
Sbjct: 632 NGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF 691
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
L+ MY+K G L A F+ M ++ + +W ++I+ G ++A+ LF ++E + +
Sbjct: 692 NNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGV 751
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
P+ + VL AC +D GR + +++ + + ++D+ +CG + EA
Sbjct: 752 SPDVYSMTSVLHACACGNSLDKGRDVHNYIRK-NNMALCLPVSNALMDMYAKCGSMEEAY 810
Query: 374 ELIKRMVWKPDVVMWGALLAA 394
+ ++ K D+V W ++
Sbjct: 811 LVFSQIPVK-DIVSWNTMIGG 830
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 153/298 (51%), Gaps = 5/298 (1%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
+ ++ +L+ C+ + L K +H+ +S +G+ ++ + LV Y L R++FD
Sbjct: 452 NAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDH 511
Query: 176 I-RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
I + + +W M+S YA+ E++ LF +M G NS T + +L A G +
Sbjct: 512 ILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGE 571
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
+++H V GF + +L+ Y K+G + A LFD + +R++ +WN+MISG
Sbjct: 572 CKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVM 631
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKI 353
+G + AL+ F ++ ++ + T V ++AC + G + +GR + G +K + E
Sbjct: 632 NGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF 691
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ ++D+ +CG + +A + ++M K VV W +L+AA G + A R+ E+
Sbjct: 692 NNT--LLDMYSKCGNLNDAIQAFEKMGQKT-VVSWTSLIAAYVREGLYDDAIRLFYEM 746
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 244/452 (53%), Gaps = 48/452 (10%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C S L +IHAQ+++S Q ++ + LL+ S G L A ++F I +P+ +WN
Sbjct: 37 CVSFRNLAKIHAQIVVSGFSQKNYILNHLLSLYI--SFGSLGSAQKVFEDITAPSTTVWN 94
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I+ S K+I L+ M G N T++F+L AC R +QIH V +
Sbjct: 95 QIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVN 154
Query: 145 GL---------------------DLDL-------------HVV--NCLVRCYSVSSDLNN 168
G D DL +VV N L+ Y D +
Sbjct: 155 GYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYVRRGDFDG 214
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
AR+VFDE+ R + WT M++G+AQ+ + AL LFDQM G E + V L + LSACA+
Sbjct: 215 ARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAE 274
Query: 229 SGCLELGEKVHVFV----KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
G L LG+ +H +V + R + L AL+HMY G + A +F+ +P+RN +
Sbjct: 275 LGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQRNTVS 334
Query: 285 WNAMISGLASHGHAEEALDLFRKL---EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
W+++I+G A G EA+ +F+ + + ++ P++ITF+G L+AC HAG I G ++F
Sbjct: 335 WSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQ 394
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
SM + +G+ P+IEHYGCMVDLL R G + EA LI+ M KP+ +WGALL+ C+ H N
Sbjct: 395 SMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKND 454
Query: 402 EVAERVVKEI-IALEPNNH--GVYVVLSNMYA 430
E+ V K + + PNN G +++L+N+YA
Sbjct: 455 EIVSHVAKHLSFEIHPNNQAAGYFMLLANVYA 486
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 152/331 (45%), Gaps = 44/331 (13%)
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
R+ Q F+ VLK+C + R+L +IH + SG +++N L+ Y L
Sbjct: 21 RSSRVRQQFIFS-VLKSCVSFRNL---AKIHAQIVVSGFSQKNYILNHLLSLYISFGSLG 76
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
+A++VF++I + VW +I G+ +S + +++ LF +M + G E N T + +LSAC
Sbjct: 77 SAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACV 136
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHM--------------------------- 260
+S GE++H V + G+ + T L+++
Sbjct: 137 RSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNV 196
Query: 261 ---------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
Y + G A+ +FD MPERN+ TW M++G A +G + AL LF ++ +
Sbjct: 197 VGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRA 256
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG---IEPKIEHYGCMVDLLGRCGK 368
+ + + V LSAC G + +G+ I G ++R + + + ++ + CG
Sbjct: 257 GVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCG- 315
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
V++ + + + + V W +++ G
Sbjct: 316 VMDLAYKVFEEIPQRNTVSWSSIITGFAKQG 346
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 223/370 (60%), Gaps = 5/370 (1%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L+ A +LF+ + N W T+I A + KA+ L + M R PN +T++ VL++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+ + + + +H + K GL+ D+ V + L+ ++ + +A VFDE+ VW
Sbjct: 172 CNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
++I G+AQ+ R++ AL LF +M GF TL SVL AC LELG + HV +
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV- 287
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
++ IL ALV MY K G+L A +F+ M ER++ TW+ MISGLA +G+++EAL L
Sbjct: 288 -KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +++ PN IT VGVL AC HAG ++ G F SMK++YGI+P EHYGCM+DLLG
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+ GK+ +A +L+ M +PD V W LL AC+ N+ +AE K++IAL+P + G Y +
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 425 LSNMYAEAES 434
LSN+YA ++
Sbjct: 467 LSNIYANSQK 476
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 39/304 (12%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMW 83
C M ++ +H +I D F S L+ F L D A +F+ + + + +W
Sbjct: 172 CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED---ALSVFDEMVTGDAIVW 228
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N++I A + D A+ L+ M+R GF Q T T VL+AC+ + L Q H H+ K
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
D DL + N LV Y L +A +VF++++ R + W+TMISG AQ+ + EAL L
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F++M G +PN +T+ VL AC+ +G LE G + F M
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDG--WYYFRSM------------------- 385
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
K L+ P R + MI L G ++A+ L ++E E P+ +T+ +
Sbjct: 386 -------KKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTL 433
Query: 324 LSAC 327
L AC
Sbjct: 434 LGAC 437
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 151/302 (50%), Gaps = 7/302 (2%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA 169
G + T++ ++K C + R+++ I H+ +G + +VN L+ Y + LN+A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
Q+FD++ R + WTTMIS Y++ +AL L ML + PN T +SVL +C
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
+ + +H + G E + +AL+ ++ K G A ++FD M + WN++I
Sbjct: 176 SDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
G A + ++ AL+LF+++++ + T VL AC +++G Q + +
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ---AHVHIVKY 289
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ + +VD+ +CG + +A + +M + DV+ W +++ +G + A ++ +
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 410 EI 411
+
Sbjct: 349 RM 350
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
A+ D + G +S T + ++ C + + G + + G L L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+MY K L A LFD MP+RN+ +W MIS + ++AL+L + ++ + PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
T+ VL +C G DV G +K G+E + ++D+ + G+ +A +
Sbjct: 164 TYSSVLRSC--NGMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
MV D ++W +++ + +VA + K +
Sbjct: 220 MV-TGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 209/318 (65%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P++ T ++ AC+ + +L K +H++ + GLD +L V N ++ Y D+ +A++V
Sbjct: 9 PDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEV 68
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
F+ IR + + WT+M+SG A+S E+L LF +M + EP+ +TL VLSACAQ+G L
Sbjct: 69 FNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGAL 128
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+ G+ +H+ + +L TALV MY K G++ A +F M RN+ TWNAMI GL
Sbjct: 129 DQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGL 188
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
A HGH E+A+ LF ++E ++++P+D+TF+ +L AC HAG +D G +F +MK + IEP+
Sbjct: 189 AMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPR 248
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+EHYGC+VDLL R KV +A I+ M K + V+W LL AC++ G+ ++AE++ + +I
Sbjct: 249 MEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVI 308
Query: 413 ALEPNNHGVYVVLSNMYA 430
LEP++ G YV+LSN+YA
Sbjct: 309 ELEPDSCGRYVMLSNLYA 326
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 115/196 (58%), Gaps = 2/196 (1%)
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
++ P+ VT+ S++ ACAQ G LE G+ +H + K G + + A++ MY K +
Sbjct: 4 LDNLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIE 63
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A+ +F+ + E+++ +W +M+SGLA G+ +E+L LFRK++ +I P++IT VGVLSAC
Sbjct: 64 SAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACA 123
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
G +D G+ I + + + I + +VD+ +CG + A ++ +RM + +V W
Sbjct: 124 QTGALDQGKYIHLLIDK-FEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTW 181
Query: 389 GALLAACKNHGNIEVA 404
A++ HG+ E A
Sbjct: 182 NAMIGGLAMHGHGEDA 197
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
D+ A +FN I+ + W +++ A S +++ L+ M+ P++ T VL
Sbjct: 61 DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLS 120
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
AC+ +L+ K IH + K ++ DL + LV Y+ ++ A QVF +R R +
Sbjct: 121 ACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT 180
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI G A +A+ LFDQM + P+ VT ++L AC+ +G ++ E + +F
Sbjct: 181 WNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVD--EGLAMFQA 238
Query: 244 MRG-FEMGAILGT--ALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAE 299
M+ F++ + +V + + + A A ++MP + N W ++ S GH +
Sbjct: 239 MKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFD 298
Query: 300 EALDLFRKL 308
A + R++
Sbjct: 299 LAEKIXRRV 307
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 223/370 (60%), Gaps = 5/370 (1%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L+ A +LF+ + N W T+I A + KA+ L + M R PN +T++ VL++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+ + + + +H + K GL+ D+ V + L+ ++ + +A VFDE+ VW
Sbjct: 172 CNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
++I G+AQ+ R++ AL LF +M GF TL SVL AC LELG + HV +
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV- 287
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
++ IL ALV MY K G+L A +F+ M ER++ TW+ MISGLA +G+++EAL L
Sbjct: 288 -KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +++ PN IT VGVL AC HAG ++ G F SMK++YGI+P EHYGCM+DLLG
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+ GK+ +A +L+ M +PD V W LL AC+ N+ +AE K++IAL+P + G Y +
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 425 LSNMYAEAES 434
LSN+YA ++
Sbjct: 467 LSNIYANSQK 476
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 39/304 (12%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMW 83
C M ++ +H +I D F S L+ F L D A +F+ + + + +W
Sbjct: 172 CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED---ALSVFDEMVTGDAIVW 228
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N++I A + D A+ L+ M+R GF Q T T VL+AC+ + L Q H H+ K
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
D DL + N LV Y L +A +VF++++ R + W+TMISG AQ+ + EAL L
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F++M G +PN +T+ VL AC+ +G LE G + F M
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDG--WYYFRSM------------------- 385
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
K L+ P R + MI L G ++A+ L ++E E P+ +T+ +
Sbjct: 386 -------KKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTL 433
Query: 324 LSAC 327
L AC
Sbjct: 434 LGAC 437
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 151/302 (50%), Gaps = 7/302 (2%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA 169
G + T++ ++K C + R+++ I H+ +G + +VN L+ Y + LN+A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
Q+FD++ R + WTTMIS Y++ +AL L ML + PN T +SVL +C
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
+ + +H + G E + +AL+ ++ K G A ++FD M + WN++I
Sbjct: 176 SDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
G A + ++ AL+LF+++++ + T VL AC +++G Q + +
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ---AHVHIVKY 289
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ + +VD+ +CG + +A + +M + DV+ W +++ +G + A ++ +
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 410 EI 411
+
Sbjct: 349 RM 350
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
A+ D + G +S T + ++ C + + G + + G L L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+MY K L A LFD MP+RN+ +W MIS + ++AL+L + ++ + PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
T+ VL +C G DV G +K G+E + ++D+ + G+ +A +
Sbjct: 164 TYSSVLRSC--NGMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
MV D ++W +++ + +VA + K +
Sbjct: 220 MV-TGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 224/378 (59%), Gaps = 2/378 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRA-QASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
S+ G A R+F+ I + WN++I+A QA+ + D A + PN T
Sbjct: 177 SNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFRAMVAEGAVPPNAVTV 236
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
VL AC + L + + V G+++ V + LV Y ++ AR+VFD I +
Sbjct: 237 AVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKCGEMAEARRVFDAIAH 296
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ W +I+GYAQ+ + EA+ LF M G P+ +TL VLSACA G LELG ++
Sbjct: 297 KDNVAWNALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLSACAAVGALELGTEL 356
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
+ RGF +GTALV MY+K G L +A +F+ +P +N A+WNA+I GLA +G
Sbjct: 357 DRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQVFEKLPCKNEASWNALICGLAFNGRG 416
Query: 299 EEALDLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EA+ F + K++ + P+DITF+GVLSAC HAG + GR+ F S+ + I PKIEHY
Sbjct: 417 QEAIRQFELMRKQEGLRPDDITFIGVLSACVHAGLLKDGRRWFDSLTSEFQIIPKIEHYS 476
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLL R G + EA + I+++ KPD VM GALLAAC+ N+EV+ RV+ +I+ LEP+
Sbjct: 477 CMVDLLARAGHLEEAWDFIEKIPGKPDAVMLGALLAACRKCKNVEVSVRVINKIMLLEPS 536
Query: 418 NHGVYVVLSNMYAEAESM 435
N YVV S +YA ++ +
Sbjct: 537 NSWNYVVSSKIYASSDRL 554
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 223/429 (51%), Gaps = 17/429 (3%)
Query: 11 PPLP-IPP----LSLLADKCKSMHQLKQIHAQMIISSRI--QDHFAASRLLAFCALSS-S 62
P +P +PP +S L +C S+ ++Q+HA ++ R +HF + L + S +
Sbjct: 20 PAMPGVPPFSSAVSKLHSRCHSLSTIQQLHAHLLHHDRPIPYNHFLSKLLSISSSSSPST 79
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
Y L + +P F +N +R A+S P + L + M R P+ +T F+L
Sbjct: 80 AAADYVHLLLTAHPTPTAFSFNVALRFFAAS-RPRTTLQLSLRMLRAALRPDAYTLPFLL 138
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
A + + H + K GL H V+ LV YS AR+VFD I R +
Sbjct: 139 LAAARCPAPAFAASAHALLQKLGLHNHDHTVHSLVTMYSNLGRPRAARRVFDGILRRDVV 198
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W +MI Y + ++A +F M+ EG PN+VT+A VL+AC +G L LG + +
Sbjct: 199 SWNSMIKAYQAAGMKDDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEW 258
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
VK G E+G+++G+ALV MY K G +A+A+ +FD++ ++ WNA+I+G A +G ++EA
Sbjct: 259 VKSVGMEVGSLVGSALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEA 318
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMV 360
+ LF + + P+ IT VGVLSAC G +++G ++ +++R G + +V
Sbjct: 319 ISLFHSMRQAGARPDKITLVGVLSACAAVGALELGTELDRYALQR--GFYSNVYVGTALV 376
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER---VVKEIIALEPN 417
D+ +CG + A ++ +++ K + W AL+ +G + A R ++++ L P+
Sbjct: 377 DMYSKCGDLTRAIQVFEKLPCKNEAS-WNALICGLAFNGRGQEAIRQFELMRKQEGLRPD 435
Query: 418 NHGVYVVLS 426
+ VLS
Sbjct: 436 DITFIGVLS 444
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 258/477 (54%), Gaps = 72/477 (15%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++++ + +HA ++I + + A++L++F + G LS A +LF+ I + N W
Sbjct: 41 RALYRGRALHAHLVIIGLARLTYFAAKLMSF--YTECGQLSNARKLFDKIPNTNIRRWIV 98
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT------ 139
L A A ++A+ + M++ G PNQ +LKAC ++ + +HT
Sbjct: 99 LTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNS 158
Query: 140 -------------------HVSKSG------LDLDLHVVNCLVRCYS----VSSDLNNAR 170
HV K+ +D DL V+N +V Y+ V LN +
Sbjct: 159 FESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQ 218
Query: 171 QV------------------FDEIRNRTLNV-----------------WTTMISGYAQSF 195
++ F ++ ++++ WT++ISG+ Q+F
Sbjct: 219 KMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNF 278
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
+E F +ML +GF P+SVT++S+L AC L G+++H + + G E + +
Sbjct: 279 HNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRS 338
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
ALV MY K G +++AK LF MPERN TWN++I G A+HG+ EA++LF ++E+
Sbjct: 339 ALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKL 398
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
+ +TF VL+AC HAG +++G +F M+ Y IEP++EHY CMVDLLGR GK+ EA +L
Sbjct: 399 DHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDL 458
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
IK M +PD +WGALL AC+NHGNIE+AE + + LEP + G ++LSN+YA+A
Sbjct: 459 IKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADA 515
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 165/339 (48%), Gaps = 12/339 (3%)
Query: 100 IFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC 159
++ ++ RT F + T+ + + R+L + +H H+ GL + L+
Sbjct: 13 VYRNISTHRT-FQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSF 71
Query: 160 YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
Y+ L+NAR++FD+I N + W + A+ EAL F +M EG PN L
Sbjct: 72 YTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVL 131
Query: 220 ASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE 279
S+L AC GE +H + FE A + +AL++MY+K G + KA +FD + +
Sbjct: 132 PSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVD 191
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
+++ NAM+SG A HG EAL+L +K+++ + PN +++ +++ G + ++
Sbjct: 192 KDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEV 251
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV---WKPDVVMWGALLAACK 396
F M G+EP + + ++ + E + K M+ + P V +LL AC
Sbjct: 252 FRLMT-ANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACT 310
Query: 397 NHGNIEVAERV--VKEIIALEPNNHGVYV--VLSNMYAE 431
N N+ + + +I +E + VYV L +MYA+
Sbjct: 311 NVANLRHGKEIHGYAMVIGVEKD---VYVRSALVDMYAK 346
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 218/373 (58%), Gaps = 3/373 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
GDL A +F +I + + WN++ +A + A LY M R F P+ TF
Sbjct: 808 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFIN 867
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+ +C N +L + IH+H G D D+ +N + YS S D +AR +FD + +RT
Sbjct: 868 LAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRT 927
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
WT MISGYA+ +EAL LF M+ G +P+ VTL S++S C + G LE G+ +
Sbjct: 928 CVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA 987
Query: 241 FVKMRGFEMGAIL-GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ G + ++ AL+ MY+K G++ +A+ +FD+ PE+ + TW MI+G A +G
Sbjct: 988 RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFL 1047
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL LF K+ PN ITF+ VL AC H+G ++ G + F MK+VY I P ++HY CM
Sbjct: 1048 EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCM 1107
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR GK+ EA ELI+ M KPD +WGALL ACK H N+++AE+ + + LEP
Sbjct: 1108 VDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMA 1167
Query: 420 GVYVVLSNMYAEA 432
YV ++N+YA A
Sbjct: 1168 APYVEMANIYAAA 1180
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 187/401 (46%), Gaps = 45/401 (11%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN IR + +P +++ L+ M+R GF PN TF FV KAC+ + + CC+ +H H+
Sbjct: 626 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 685
Query: 143 KSGLDLDLHV----VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
KS D+ V V+ V+C SV + A +VF+ + R W M+SG+ QS +
Sbjct: 686 KSPFWSDVFVGTATVDMFVKCNSV----DYAAKVFERMPERDATTWNAMLSGFCQSGHTD 741
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
+A LF +M + P+SVT+ +++ + + L+L E +H G ++ + +
Sbjct: 742 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 801
Query: 259 HMYTKNGALAKAKALFDSMP--ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
Y K G L AK +F+++ +R + +WN+M + G A +A L+ + +E+ P+
Sbjct: 802 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 861
Query: 317 DITFVGVLSACCHAGFIDVGRQI------FGSMKRVYGIEPKIEHYG-----CMVDLL-- 363
TF+ + ++C + + GR I G+ + + I I Y C LL
Sbjct: 862 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 921
Query: 364 -----------------GRCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEV 403
G + EA L M+ KPD+V +L++ C G++E
Sbjct: 922 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 981
Query: 404 AERV--VKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
+ + +I + +N + L +MY++ S+ +I
Sbjct: 982 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 1022
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 191/424 (45%), Gaps = 26/424 (6%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+HA +I S D F + + +S D YA ++F + + WN ++ S
Sbjct: 680 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVD--YAAKVFERMPERDATTWNAMLSGFCQS 737
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+ DKA L+ MR P+ T ++++ S +SL + +H + G+D+ + V
Sbjct: 738 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 797
Query: 154 NCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N + Y DL++A+ VF+ I +RT+ W +M Y+ A +A L+ ML E
Sbjct: 798 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 857
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+P+ T ++ ++C L G +H G + + MY+K+ A+
Sbjct: 858 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 917
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LFD M R +W MISG A G +EAL LF + K P+ +T + ++S C G
Sbjct: 918 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 977
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGC----------MVDLLGRCGKVLEAEELIKRMVW 381
++ G+ I+ + + YGC ++D+ +CG + EA ++
Sbjct: 978 SLETGKW----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 1027
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALE-PNNHGVYVVLSNMYAEAESMKMQLE 440
K VV W ++A +G A ++ ++I L+ NH ++ + A + S++ E
Sbjct: 1028 KT-VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 1086
Query: 441 ILLV 444
+
Sbjct: 1087 YFHI 1090
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ---SGCLELGE 236
++N W I E+L+LF +M GFEPN+ T V ACA+ GC E+
Sbjct: 622 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM-- 679
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
VH + F +GTA V M+ K ++ A +F+ MPER+ TWNAM+SG G
Sbjct: 680 -VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 738
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
H ++A LFR++ +I P+ +T + ++ + + + + R+ G++ ++
Sbjct: 739 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL-GVDVQVTVA 797
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPD--VVMWGALLAA 394
+ G+CG L++ +L+ + + D VV W ++ A
Sbjct: 798 NTWISTYGKCGD-LDSAKLVFEAIDRGDRTVVSWNSMFKA 836
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 240/437 (54%), Gaps = 41/437 (9%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAF---CALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
K+IH ++ +D F + L+ CA + YA +F+ + + W+T+IR
Sbjct: 144 KEIHGFVLKKGLDRDVFVGNALMLMYGECAC-----VEYARLVFDKMMERDVVSWSTMIR 198
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV------- 141
+ + + D A+ L M P++ ++ ++ ++ K +H +V
Sbjct: 199 SLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 258
Query: 142 --------------SKSG-LDLDLHVVNCLVRCYSVS-----------SDLNNARQVFDE 175
+K G L L + N L + VS + L AR +FD
Sbjct: 259 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDS 318
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+NR + +WT M+S YAQ+ ++A LFDQM G P VT+ S+LS CA +G L+LG
Sbjct: 319 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 378
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+ VH ++ E+ IL TALV MY K G + A LF R+I WNA+I+G A H
Sbjct: 379 KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMH 438
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G+ EEALD+F ++E++ + PNDITF+G+L AC HAG + G+++F M +G+ P+IEH
Sbjct: 439 GYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEH 498
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
YGCMVDLLGR G + EA E+IK M KP+ ++WGAL+AAC+ H N ++ E +++ +E
Sbjct: 499 YGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIE 558
Query: 416 PNNHGVYVVLSNMYAEA 432
P N G V++SN+YA A
Sbjct: 559 PENCGYNVLMSNIYAAA 575
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 193/442 (43%), Gaps = 56/442 (12%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
PL PP S ++ Q KQIHA +I + HF + L
Sbjct: 40 PLQTPPTSPSQHDLSTLEQTKQIHAHII-----KTHFHHA-------------LQIPLND 81
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F S SP+ WN +I + P A+ +Y +R+ F + VLKAC V
Sbjct: 82 FPSGLSPS-AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWT 140
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
K+IH V K GLD D+ V N L+ Y + + AR VFD++ R + W+TMI
Sbjct: 141 QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSL 200
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV--KMRGFEM 249
+++ + AL L +M P+ V + S+++ A + + +G+ +H +V M
Sbjct: 201 SRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM 260
Query: 250 GAILGTALVHMYTKNGALA-------------------------------KAKALFDSMP 278
G TAL+ MY K G L +A+ALFDS
Sbjct: 261 GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQ 320
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
R++ W AM+S A ++A +LF ++ + P +T V +LS C AG +D+G+
Sbjct: 321 NRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKW 380
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ + + +E +VD+ +CG + A L + + D+ MW A++ H
Sbjct: 381 VHSYIDK-ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR-DICMWNAIITGFAMH 438
Query: 399 GNIEVAERVVKEI--IALEPNN 418
G E A + E+ ++PN+
Sbjct: 439 GYGEEALDIFAEMERQGVKPND 460
>gi|218199092|gb|EEC81519.1| hypothetical protein OsI_24907 [Oryza sativa Indica Group]
Length = 460
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 239/411 (58%), Gaps = 10/411 (2%)
Query: 27 SMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSI--QSP-NHFM 82
S+ KQIHA+ + + H A LL A + L YA + + + P + F
Sbjct: 27 SLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDPFP 86
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
NT++R A S P A+ L+ RR P+ HT+ +L+AC+ + +L + +H +
Sbjct: 87 LNTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLLQACARLLALREGECLHAEAA 143
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE--IRNRTLNVWTTMISGYAQSFRANEA 200
K+G + V N LV Y +A +VFDE +R R L W +M++ +A + R NE
Sbjct: 144 KNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEV 203
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L +F +ML F P+ T+ SVL+ACA+ G L LG +VHV+V+ G + + AL+ +
Sbjct: 204 LTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDL 263
Query: 261 YTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
Y K G++ A+ +F+ M R + +W ++I GLA++G +EAL+LF +E+E++VP +IT
Sbjct: 264 YAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEIT 323
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
VGVL AC H G +D G + F MK YGI P+IEH GCMVDLLGR G+V EA + I M
Sbjct: 324 MVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITM 383
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+P+ V+W LL +C H +E+ + + ++ L+P + G YV+LSN+YA
Sbjct: 384 PLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYA 434
>gi|225435652|ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
[Vitis vinifera]
Length = 461
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 254/432 (58%), Gaps = 13/432 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS--I 75
+ +L + K+ L Q+H+ ++ +++ DH + F SS + +A +F+ I
Sbjct: 5 IQILLQRSKTTTHLLQLHSLILKTAK--DH-NPDLISQFIFSISSVSIEFARLVFDRLPI 61
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
++P F WN++IRA S P +A+ L+ M+R G P+ T+ FV+KAC +
Sbjct: 62 RAPI-FAWNSIIRAYTKSSVPIEAVKLFSQMQRVGLKPDNFTYPFVVKACGRSLVVGAGG 120
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+H+ + K+G D D +V N L+R Y+ + + AR+VF+E+ R + W++MI+GY
Sbjct: 121 AMHSIIVKAGFDSDRYVGNTLLRMYANLNAVGLARRVFNEMTVRDVVSWSSMIAGYVACN 180
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
+ALM+F M++ +PNSVTL S+LSAC + + +GE +H ++ + + LGT
Sbjct: 181 CQADALMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGESIHSYIIVNCIGLDVALGT 240
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
A++ MY+K G + KA +F+S+ E+N+ +W MISGLA H H E+A+ LF ++E+ + P
Sbjct: 241 AILEMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQMEQTGLQP 300
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
+ ++F +LSAC H G +D G+ F M ++Y I P +EHYGCMVD+ R G + EA E+
Sbjct: 301 DSMSFSEILSACSHLGLVDEGQTFFSQMVKIYNIRPTMEHYGCMVDMFARAGMIEEAYEI 360
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNI-EVAERVVKEIIALEPNNHGVYVV------LSNM 428
IK M +P+ V+ + + AC+N G + E + + ++ +EP+ YV+ LS
Sbjct: 361 IKNMPMEPNSVILRSFIGACRNDGRVFGFDENLRRLLLEIEPDLGANYVLASGVSSLSGC 420
Query: 429 YAEAESMKMQLE 440
+ EA +++ ++
Sbjct: 421 WNEAADLRVSMK 432
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 236/417 (56%), Gaps = 33/417 (7%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D F + L+ A ++ G + A R+F+ + + W ++ + N ++A+ L+ +
Sbjct: 103 DGFVGTALVR--AYAACGRVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHS 160
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M+R+ P+Q VL C++ R+L K IH+++ S +D V L+ Y+ +D
Sbjct: 161 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCAD 220
Query: 166 LNNARQVFDEIRNRTLNV-------------------------------WTTMISGYAQS 194
+ A ++++ + + + + W+ MI+GYA+S
Sbjct: 221 MEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAES 280
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+ EAL LF M G +P+ +T+ SV+SACA G LE +H FV+ +G
Sbjct: 281 SKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIG 340
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ M++K G+L A +F++MP++N+ TW ++I+ A HG AL LF ++ E I
Sbjct: 341 NALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQ 400
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN +TF+G+L ACCHAG ++ GR +F M + Y IEP EHYGCMVDLLGR + +A +
Sbjct: 401 PNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAAD 460
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
LI+ M +P+VV+WG+LLAAC+ HG++E+ K+I+ L+PN+ G V+LSN+YAE
Sbjct: 461 LIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAE 517
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 160/332 (48%), Gaps = 44/332 (13%)
Query: 106 MRRTGF-APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
+RR G AP + +L+A + RSL H + G ++D V LVR Y+
Sbjct: 59 LRRVGLPAPGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACG 118
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
+ +AR+VFD + +R L W M+ Y Q+ EAL+LF M P+ V +A+VLS
Sbjct: 119 RVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLS 178
Query: 225 ACAQSGCLELGEKVHVFVKM-------------------------------RGFEMGAIL 253
CA + L G+ +H ++ + R E +L
Sbjct: 179 TCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSEKEIVL 238
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
T +V+ Y KNG + A ++F+ MP +++ +W+AMI+G A EAL+LF +++ +
Sbjct: 239 STTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGV 298
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFG-----SMKRVYGIEPKIEHYGCMVDLLGRCGK 368
P++IT + V+SAC + G ++ R I SM ++ I ++D+ +CG
Sbjct: 299 KPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIG------NALIDMFSKCGS 352
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ A ++ M K +VV W +++ A HG+
Sbjct: 353 LTLALDVFNAMPQK-NVVTWTSIITASAMHGD 383
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P L S+L A A + L H G E+ +GTALV Y G + A+ +
Sbjct: 67 PGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRVEDARRV 126
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
FD MP+R++ W M+ + EEAL LF +++ ++VP+ + VLS C H +
Sbjct: 127 FDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLSTCAHTRNL 186
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
G+ I M V + ++++ C + AE+L R V + ++V+ ++
Sbjct: 187 RFGKAIHSYM-LVSDTLIDAQVSCALMNMYASCADMEMAEKLYNR-VSEKEIVLSTTMVY 244
Query: 394 ACKNHGNIEVAERV 407
+G +E+A +
Sbjct: 245 GYAKNGKVEIAHSI 258
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 236/405 (58%), Gaps = 3/405 (0%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
IH + + +D + A L+ A G + A ++F+ + N +W L++
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYA--QFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKY 188
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH-THVSKSGLDLDLHV 152
+ L+ MR TG A + T ++KAC NV + K +H + +S +D ++
Sbjct: 189 SKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYL 248
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
++ Y L+NAR++F+ R + +WTT+ISG+A+ RA EA+ LF QML E
Sbjct: 249 EASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESI 308
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN TLA++L +C+ G L G+ VH ++ G EM A+ T+ + Y + G + A+
Sbjct: 309 LPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARK 368
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FD MP+RN+ +W++MI+ +G EEALD F ++ + +VPN +TFV +LSAC H+G
Sbjct: 369 VFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGN 428
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G + F SM R YG+ P+ EHY CMVDLLGR G++ EA+ I M KP WGALL
Sbjct: 429 VKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKM 437
+AC+ H +++A + ++++++EP+ VYV+LSN+YA+A +M
Sbjct: 489 SACRIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEM 533
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 192/392 (48%), Gaps = 10/392 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ- 76
LS+L+ + K++H +Q+HA++II QD L A S L +AT F+ I
Sbjct: 11 LSILS-QTKTLHHTQQVHAKVIIHG-FQDEVVLGSSLTN-AYIQSNRLDFATASFDRIPC 67
Query: 77 -SPNHFMWNTLIR--AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
N WNT++ +++ S + LY MRR + F +KAC + L
Sbjct: 68 WKRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
IH K+GLD D +V LV Y+ + +A++VFDE+ R +W ++ GY +
Sbjct: 128 GMLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLK 187
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMGAI 252
+ +E LF M G +++TL ++ AC + G+ VH R F +
Sbjct: 188 YSKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGY 247
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
L +++ MY K L A+ LF++ ERN+ W +ISG A A EA+DLFR++ E
Sbjct: 248 LEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGES 307
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
I+PN T +L +C G + G+ + G M R GIE ++ +D RCG + A
Sbjct: 308 ILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIR-NGIEMDAVNFTSFIDTYARCGNIQMA 366
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++ M+ K +V+ W +++ A +G E A
Sbjct: 367 RKVFD-MMPKRNVISWSSMINAFGINGLFEEA 397
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 129/280 (46%), Gaps = 9/280 (3%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI---- 176
+L S ++L+ +Q+H V G ++ + + L Y S+ L+ A FD I
Sbjct: 10 LLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWK 69
Query: 177 RNRTLNVWTTMISGYAQSFRA--NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
RNR + W T++SGY++S ++ L+L+++M +S L + AC G LE
Sbjct: 70 RNR--HSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G +H G + + +LV MY + G + A+ +FD MP RN W ++ G
Sbjct: 128 GMLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLK 187
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
+ E LF + + + +T + ++ AC + G+ + G R I+
Sbjct: 188 YSKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGY 247
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++D+ +C + A +L + V + +VVMW L++
Sbjct: 248 LEASIIDMYVKCRLLDNARKLFETSV-ERNVVMWTTLISG 286
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-- 278
++LS +Q+ L ++VH V + GF+ +LG++L + Y ++ L A A FD +P
Sbjct: 9 ALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCW 68
Query: 279 ERNIATWNAMISGLASHG--HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+RN +WN ++SG + + + L L+ ++ + + V + AC G ++ G
Sbjct: 69 KRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 337 RQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
I G +MK G++ +V++ + G + A+++ M + + V+WG L+
Sbjct: 129 MLIHGLAMKN--GLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVR-NSVLWGVLM 182
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 245/427 (57%), Gaps = 5/427 (1%)
Query: 9 RQPPLPIPPLS-LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
+Q PL LS LL QLK+IHA +I + + + ++LL L GD+ Y
Sbjct: 4 KQTPLTKQMLSELLRASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLV--GDMCY 61
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++F+ + P F+WNTL + + P +++ LY MR G P++ T+ FV+KA S
Sbjct: 62 ARQVFDEMPKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ L C +H HV K+G + V LV Y +L++A +F+ ++ + L W
Sbjct: 122 LGVLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I+ Q+ + AL F++M + + +S T+ S+LSAC Q G L++GE+++ +
Sbjct: 182 IAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEI 241
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
E I+ A + M+ K G+ A+ LFD M +RN+ +W+ MI G A +G + EAL LF
Sbjct: 242 ECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTM 301
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV--YGIEPKIEHYGCMVDLLGR 365
++ E + PN +TF+GVLSAC HAG ++ G++ F M R+ +EP+ EHY CMVDLLGR
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGR 361
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G + EA E IK+M +PD +WGALL AC H ++ + ++V ++ P+ +V+L
Sbjct: 362 SGLLEEAYEFIKKMRVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLL 421
Query: 426 SNMYAEA 432
SN+YA A
Sbjct: 422 SNIYAAA 428
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 237/425 (55%), Gaps = 6/425 (1%)
Query: 11 PPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCAL--SSSGDLSYA 68
P P PL C S+ L Q+HA + S +RLL C ++ L+YA
Sbjct: 15 PAKPKGPLLPHLPHCTSLRALAQLHAAAVKSGLGAHPALVTRLLTLCTKQGAAPAHLAYA 74
Query: 69 TRLFNSIQSPNHFMW-NTLIRAQA-SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
++F+ I +P +W NTL+R A SS +A + M G AP+ +TF +LKAC+
Sbjct: 75 RQVFDRIPTPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACA 134
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WT 185
R+ +Q H K+G +V+ L+ Y+ D +AR +F + N V +
Sbjct: 135 AARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRVPNGDCVVSYN 194
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
MI+ +S R EAL+LF +M +G +P SVT+ SVLSACA G LELG +H +V+
Sbjct: 195 AMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLGALELGRWIHEYVRKA 254
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G + + TAL+ MY K G+L A +F M R+ W+ MI A+H + EA+ LF
Sbjct: 255 GLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYANHSYGREAISLF 314
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
+++K+ I P+ +TF+GVL AC H+G + G Q F SM R YGI P I+HYGC+ DLL R
Sbjct: 315 EEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVPGIKHYGCVTDLLAR 373
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G++ +A + I + +P ++W LL+AC +HG +++ +RV + I+ L+ + YV+
Sbjct: 374 SGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVFERILELDDTHGSDYVIF 433
Query: 426 SNMYA 430
SN+ A
Sbjct: 434 SNLCA 438
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 231/380 (60%), Gaps = 4/380 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L +A ++F+ + + WNTLI + + + L+ M + T ++
Sbjct: 73 GQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKII 132
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
ACS++ + ++ ++ L++D+++ N L+ Y +L AR++FD + R +
Sbjct: 133 LACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVI 192
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT+MI+GY+Q+ + ++A+ LF +M+ +P+ VT+ASVLSACA G L++G VH ++
Sbjct: 193 SWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYI 252
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ G + +G +L+ MY K G + KA +F M +++ +W ++ISGLA +G A AL
Sbjct: 253 RRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSAL 312
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
DLF ++ +E + P TFVG+L AC HAG ++ G + F SM+ V+G+ P ++HYGC+VDL
Sbjct: 313 DLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDL 372
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G + +A E IK+M PDVV+W LL+ACK HGN+ +AE K ++ L+P + G Y
Sbjct: 373 LSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNY 432
Query: 423 VVLSNMYAEA----ESMKMQ 438
V+LSN YA ++MKM+
Sbjct: 433 VLLSNTYAGVDRWDDAMKMR 452
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 165/306 (53%), Gaps = 5/306 (1%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ +N+ + IH H K G + L V N L+ Y++ L A+++FD + +R
Sbjct: 29 LVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDR 88
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L W T+I GY+Q + E L LFD M + ++VT+ ++ AC+ G E + +
Sbjct: 89 DLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMV 148
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
++K E+ LG L+ MY + G L A+ LFD+MP+R++ +W +MI+G +
Sbjct: 149 KYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFS 208
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+A+ LF+++ ++ P+ +T VLSAC H G +DVG + ++R +G++ I +
Sbjct: 209 DAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQADIYVGNSL 267
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
+D+ +CG V +A E+ RM K D V W ++++ +G A + +++ ++P
Sbjct: 268 IDMYCKCGMVEKALEVFHRMKDK-DSVSWTSVISGLAVNGFANSALDLFSQMLREGVQP- 325
Query: 418 NHGVYV 423
HG +V
Sbjct: 326 THGTFV 331
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 4/195 (2%)
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
+ +HV GFE + AL+HMY G L A+ +FD M +R++ +WN +I G +
Sbjct: 42 ISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYS 101
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+ +E L LF + I + +T V ++ AC H G + + +K +E +
Sbjct: 102 QYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKE-NNLEIDV 160
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
++D+ GR G + A +L M K DV+ W +++ A ++ +E++A
Sbjct: 161 YLGNTLIDMYGRLGNLTAARKLFDNMP-KRDVISWTSMITGYSQASQFSDAVKLFQEMMA 219
Query: 414 --LEPNNHGVYVVLS 426
++P+ V VLS
Sbjct: 220 AKVKPDKVTVASVLS 234
>gi|242051158|ref|XP_002463323.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
gi|241926700|gb|EER99844.1| hypothetical protein SORBIDRAFT_02g041810 [Sorghum bicolor]
Length = 576
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 236/437 (54%), Gaps = 35/437 (8%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQM-IISSRIQDHFAASRLLAFCAL 59
+S+ + LR +P L L A +C S + HA + + R DH S + + L
Sbjct: 104 LSMLRAELRPDAYTLPFLLLAAARCPSPAVARSAHAFLEKLGLRDHDHTVHSLITMYSCL 163
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
GD A R+F+ I + WN++++A +
Sbjct: 164 ---GDHLTARRVFDGIPHRDVVSWNSIMKAYERA-------------------------- 194
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
AC + +L K + V +G+++D + + LV Y ++ AR+VFD I N+
Sbjct: 195 ----ACRDAGNLVLGKWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMEEARRVFDGISNK 250
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W MI+GYAQ+ +NEA+ LF M G P+ +TL VLS+CA G LELG ++
Sbjct: 251 DVVAWNAMITGYAQNGMSNEAIALFHSMREAGLRPDKITLVGVLSSCAAVGALELGVELD 310
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ RG +GTALV MY K G L KA +F MP +N A+WNA+I GLA +G
Sbjct: 311 GYALHRGLYSNVYVGTALVDMYAKCGDLEKATYVFGKMPFKNEASWNALICGLAFNGRGY 370
Query: 300 EALDLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
+A+ F + E+ + P+DITF+GVLSAC HAG ++ GR++F S+ V+ I PKIEHY C
Sbjct: 371 DAIQQFELMRNEKGLQPDDITFIGVLSACVHAGLLEYGRRLFSSLTPVFKIIPKIEHYSC 430
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
+VDLL R G + A + I++M K D VM GALLAAC+ N EV E+V+ I+ LEP N
Sbjct: 431 IVDLLARAGHLEAAWDFIEKMPGKVDAVMLGALLAACRKCKNAEVGEKVINRIMKLEPTN 490
Query: 419 HGVYVVLSNMYAEAESM 435
YVV S +YA ++ M
Sbjct: 491 SWNYVVSSKIYATSDKM 507
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 193/384 (50%), Gaps = 39/384 (10%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRI---QDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L +C+S+ +KQ+HA ++ S +HF + L + SS+ Y L +S +
Sbjct: 20 LLSRCRSLAAVKQLHANLLARSNRPFPYNHFLSKLLSLS-SSSSAAAADYVLLLLSSHPA 78
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P F +N +R ASS PD ++ L+++M R P+ +T F+L A + S +
Sbjct: 79 PTAFSYNVALRFFASS-RPDTSLRLFLSMLRAELRPDAYTLPFLLLAAARCPSPAVARSA 137
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + K GL H V+ L+ YS D AR+VFD I +R + W +++ Y +
Sbjct: 138 HAFLEKLGLRDHDHTVHSLITMYSCLGDHLTARRVFDGIPHRDVVSWNSIMKAYER---- 193
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
+AC +G L LG+ V +V+ G E+ +++G+AL
Sbjct: 194 --------------------------AACRDAGNLVLGKWVEEWVRSAGMEVDSLIGSAL 227
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G + +A+ +FD + +++ WNAMI+G A +G + EA+ LF + + + P+
Sbjct: 228 VGMYEKCGEMEEARRVFDGISNKDVVAWNAMITGYAQNGMSNEAIALFHSMREAGLRPDK 287
Query: 318 ITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
IT VGVLS+C G +++G ++ G ++ R G+ + +VD+ +CG + +A +
Sbjct: 288 ITLVGVLSSCAAVGALELGVELDGYALHR--GLYSNVYVGTALVDMYAKCGDLEKATYVF 345
Query: 377 KRMVWKPDVVMWGALLAACKNHGN 400
+M +K + W AL+ +G
Sbjct: 346 GKMPFKNEAS-WNALICGLAFNGR 368
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 255/475 (53%), Gaps = 63/475 (13%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
S L KC + LKQ+HA +I++ L+ A+ SG + YA +LF I P
Sbjct: 17 SSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQP 76
Query: 79 NHFMWNTLIRAQASSLNP-----------------DKAIFLYM----------------- 104
+ FMWNT+IR A +L P DK F ++
Sbjct: 77 DIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIH 136
Query: 105 -NMRRTGFAPN---QHTFTFVLKACSNV---RSL---NCCKQI-------HTHVSKSGLD 147
+ ++GF N ++T + C ++ R+L + +++ + + LD
Sbjct: 137 GKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLD 196
Query: 148 L-----------DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+ DL N ++ Y+ ++ AR++FDE+ + + W MI+GY S
Sbjct: 197 VARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRL 256
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGT 255
EAL +FD M G P+ VT+ S+LSA A G LE+G+K+H + M ++ +L
Sbjct: 257 NKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSN 316
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
AL+ MY K G++ A +F M +++ ++WN++I GLA HGHAEE+++LF+++ + ++ P
Sbjct: 317 ALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKP 376
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
N+ITFV VL AC HAG + GR F MK V+ IEP I+HYGCMVD+LGR G ++EA +
Sbjct: 377 NEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDF 436
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
I M +P+ ++W LL AC+ HG++E+ R ++++ + + G YV+LSN+YA
Sbjct: 437 IDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYA 491
>gi|225445120|ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Vitis vinifera]
gi|297738768|emb|CBI28013.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 211/355 (59%), Gaps = 2/355 (0%)
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P F WN +IR+ A+ +Y+ M R G +P+ +T VLKA + +Q+
Sbjct: 92 PAPFQWNNIIRSYTRLEAHHYALSIYIAMSRAGVSPDSYTIPIVLKAVCQAFATGFGRQV 151
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H+ + GL+L+ + + + YS + + NA +VF++ R R L W +I G +Q RA
Sbjct: 152 HSVAIRHGLELNEYCESGFISVYSKAGEFQNAHKVFEQNRFRKLGSWNAIIGGLSQGGRA 211
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH--VFVKMRGFEMGAILGT 255
EA+ +F +M GFEP+ VT+ SV SAC G L+L ++H V+ +
Sbjct: 212 KEAVTMFMEMRKCGFEPDEVTMVSVTSACGSLGHLDLALQLHKCVYQAKTSERSDTLTLN 271
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
+LV MY K G + A +F M E N+++W +MI G A HG +AL+ FR + + + P
Sbjct: 272 SLVDMYGKCGRMDLAYRVFSRMDEPNVSSWTSMIVGYAMHGQLYDALECFRCMREAGVRP 331
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
N +TF+GVLSAC H G + G+ F M YG+ P+++HYGCMVDLLGR G + EA ++
Sbjct: 332 NHVTFIGVLSACVHGGAVQEGKYYFDMMTTAYGLVPRMQHYGCMVDLLGRAGLLEEARKM 391
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
++RM K +V++WG L+ AC+ +GN+++ E V + ++ LEP N GV+VVLSN+YA
Sbjct: 392 VERMPMKANVIVWGCLMGACEKYGNVKMGEWVAEHLLELEPWNDGVFVVLSNIYA 446
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 26/328 (7%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H+ I + + S ++ S +G+ A ++F + WN +I +
Sbjct: 149 RQVHSVAIRHGLELNEYCESGFIS--VYSKAGEFQNAHKVFEQNRFRKLGSWNAIIGGLS 206
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV--SKSGLDLD 149
+A+ ++M MR+ GF P++ T V AC ++ L+ Q+H V +K+ D
Sbjct: 207 QGGRAKEAVTMFMEMRKCGFEPDEVTMVSVTSACGSLGHLDLALQLHKCVYQAKTSERSD 266
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+N LV Y ++ A +VF + ++ WT+MI GYA + +AL F M
Sbjct: 267 TLTLNSLVDMYGKCGRMDLAYRVFSRMDEPNVSSWTSMIVGYAMHGQLYDALECFRCMRE 326
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT----ALVHMYTKNG 265
G PN VT VLSAC G ++ G+ + M G + +V + + G
Sbjct: 327 AGVRPNHVTFIGVLSACVHGGAVQEGK---YYFDMMTTAYGLVPRMQHYGCMVDLLGRAG 383
Query: 266 ALAKAKALFDSMPER-NIATWNAMISGLASHGH---AEEALDLFRKLEKEQIVPNDITFV 321
L +A+ + + MP + N+ W ++ +G+ E + +LE ND FV
Sbjct: 384 LLEEARKMVERMPMKANVIVWGCLMGACEKYGNVKMGEWVAEHLLELEPW----NDGVFV 439
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGI 349
VLS I R ++ ++RV G+
Sbjct: 440 -VLSN------IYASRGLWREVERVRGV 460
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 210/361 (58%), Gaps = 33/361 (9%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M G PN+ TFTF+ AC++ SL K IHTH KSG D D++ + LV Y+
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 166 LNNARQVFDEIR-------------------------------NRTLNVWTTMISGYAQS 194
L ARQVFDE+ +R++ WTTMISGY+Q+
Sbjct: 61 LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQN 120
Query: 195 FRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+AL +F +M + PN VT+ASV SACA+ G LE+GE++ + + G +
Sbjct: 121 GMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYV 180
Query: 254 GTALVHMYTKNGALAKAKALFDSM-PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
L+ MY + G + A+ +F+ + RN+ +WN+M+ GLA HG + EAL L+ ++ E
Sbjct: 181 SNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEG 240
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
I P+D+TFVG++ AC H G + G Q+F SM+ + I PK+EHYGCMVDLLGR G++ EA
Sbjct: 241 IEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEA 300
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+L+K M KPD V+WG LL AC H N+E AE + + +EP N G YV+L N+YA A
Sbjct: 301 YDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASA 360
Query: 433 E 433
+
Sbjct: 361 Q 361
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 126/248 (50%), Gaps = 8/248 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTF 118
S SGD+ A LF + S + W T+I + + KA+ +++ M + PN+ T
Sbjct: 87 SRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTI 146
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-R 177
V AC+ + +L ++I ++ +GL +L+V N L+ Y+ ++ AR VF+EI +
Sbjct: 147 ASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGK 206
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R L W +M+ G A R+NEAL L+DQML EG EP+ VT ++ AC G + G +
Sbjct: 207 RRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQ 266
Query: 238 VHVFVKMR-GFEMGAILG--TALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLA 293
+F M F + L +V + + G L +A L SMP + + W ++ +
Sbjct: 267 --LFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACS 324
Query: 294 SHGHAEEA 301
H + E A
Sbjct: 325 FHSNVEFA 332
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 250/473 (52%), Gaps = 69/473 (14%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS------YATRLFNSIQSPNH 80
++ LKQIHA MII+ + L+ + S G + YA +LF I P+
Sbjct: 14 NLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDT 73
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
FM+N +IR + S NP +AI LY M R + +TF FVLKAC+ + +N +H
Sbjct: 74 FMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGM 133
Query: 141 VSKSGLDLDLHVVNCLV----RC---------------------------YSVSSDLNNA 169
V + G + V N L+ +C Y+ DL A
Sbjct: 134 VLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVA 193
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ----------------------- 206
R++F+E+ R L W MI+GY + A MLFD+
Sbjct: 194 RKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSK 253
Query: 207 --------MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGTAL 257
M G P+ VTL S+LSACA G LE G+KVH V ++ ++ +LG AL
Sbjct: 254 QALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNAL 313
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ MY K G + ++ +F S+ ++++ +WN++I G+A HGH +E+L LF+ +++ +I PN+
Sbjct: 314 IDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNE 373
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
ITFVGVL AC HAG ID G + F M Y IEP I H GCMVD+LGR G + EA + I
Sbjct: 374 ITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFID 433
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
M +P+ ++W LLAACK HG++E+A+ +++ ++ ++ G YV++SN+YA
Sbjct: 434 SMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYA 486
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 228/397 (57%), Gaps = 31/397 (7%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++F+ I WN++I + D+AI L+ M + G + T +L A S
Sbjct: 191 ARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSK 250
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+L+ + +H ++ +G+++D V N L+ Y+ L A+ VFD++ ++ + WT+M
Sbjct: 251 HCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSM 310
Query: 188 ISGYA-------------------------------QSFRANEALMLFDQMLMEGFEPNS 216
++ YA Q + EA+ LF +M + G P+
Sbjct: 311 VNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDD 370
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
TL S+LS C+ +G L LG++ H ++ + L +L+ MY K GAL A +F
Sbjct: 371 ATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFG 430
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
MPE+N+ +WN +I LA HG EEA+++F+ ++ + P++ITF G+LSAC H+G +D+G
Sbjct: 431 MPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMG 490
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
R F M + I P +EHY CMVDLLGR G + EA LI++M KPDVV+WGALL AC+
Sbjct: 491 RYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACR 550
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+GN+E+A++++K+++ L N G+YV+LSNMY+E++
Sbjct: 551 IYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQ 587
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 217/424 (51%), Gaps = 35/424 (8%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L D+C SM +LK +HAQ+I+ +LL+ C GDL YA LF+ I PN
Sbjct: 45 LLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCV--QEGDLRYAHLLFDQIPQPNK 102
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
FM+N LIR ++S +P K++ L+ M G PNQ TF FVLKAC+ +H
Sbjct: 103 FMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQ 162
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
K G+ V N ++ Y + +ARQVFD+I +RT+ W +MI+GY++ +EA
Sbjct: 163 AIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEA 222
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
++LF +ML G E + TL S+LSA ++ L+LG VH+++ + G E+ +I+ AL+ M
Sbjct: 223 ILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDM 282
Query: 261 YTKNGALAKAKALFDS-------------------------------MPERNIATWNAMI 289
Y K G L AK +FD MP +N+ +WN++I
Sbjct: 283 YAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSII 342
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
L G EA++LF ++ ++P+D T V +LS C + G + +G+Q + I
Sbjct: 343 CCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNI-I 401
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ ++D+ +CG + A ++ M K +VV W ++ A HG E A + K
Sbjct: 402 TVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEK-NVVSWNVIIGALALHGFGEEAIEMFK 460
Query: 410 EIIA 413
+ A
Sbjct: 461 SMQA 464
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 143/296 (48%), Gaps = 5/296 (1%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
+P T +L CS+++ L K +H + GL + + L+ DL A
Sbjct: 36 SPTHQTLHHLLDQCSSMKRL---KLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHL 92
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
+FD+I ++ +I GY+ S ++L+LF QM+ G PN T VL ACA
Sbjct: 93 LFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPF 152
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
VH G A + A++ Y + A+ +FD + +R I +WN+MI+G
Sbjct: 153 YWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAG 212
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
+ G +EA+ LF+++ + + + T V +LSA +D+GR + + + G+E
Sbjct: 213 YSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYI-VITGVEI 271
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
++D+ +CG + A+ + +M+ K DVV W +++ A N G +E A ++
Sbjct: 272 DSIVTNALIDMYAKCGHLQFAKHVFDQMLDK-DVVSWTSMVNAYANQGLVENAVQI 326
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 10/288 (3%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + K + QM+ D S A ++ G + A ++FN + N W
Sbjct: 285 KCGHLQFAKHVFDQML------DKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSW 338
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N++I +A+ L+ M +G P+ T +L CSN L KQ H ++
Sbjct: 339 NSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICD 398
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+ + + + + N L+ Y+ L A +F + + + W +I A EA+ +
Sbjct: 399 NIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEM 458
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM--GAILGTALVHMY 261
F M G P+ +T +LSAC+ SG +++G + + + + F + G +V +
Sbjct: 459 FKSMQASGLYPDEITFTGLLSACSHSGLVDMG-RYYFDIMISTFRISPGVEHYACMVDLL 517
Query: 262 TKNGALAKAKALFDSMPER-NIATWNAMISGLASHGHAEEALDLFRKL 308
+ G L +A L MP + ++ W A++ +G+ E A + ++L
Sbjct: 518 GRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQL 565
>gi|449507733|ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 442
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 239/428 (55%), Gaps = 34/428 (7%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
+S R+ L L D CKSM +LK+IHA + QD S+LL F ALS + DL
Sbjct: 4 TSFRKIAFLNQTLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDL 63
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
Y+ +L ++ +P F WNTLIRA +++ NP+ +I +++ M + G +P+ T+ F++KA
Sbjct: 64 DYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKAT 123
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S + + +H H+ KSG ++D + N L+ Y+ D+ +AR+VFDE+ + L W
Sbjct: 124 SKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWN 183
Query: 186 TMISGYAQSFRAN-------------------------------EALMLFDQMLMEGFEP 214
M+ GYA+ N EA+ LF++M +G
Sbjct: 184 AMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMA 243
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
N VTL S L ACA G LE G +H ++ + +L T+LV MY K GA+ +A +F
Sbjct: 244 NEVTLVSALCACAHLGALEHGRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVF 303
Query: 275 D--SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
S+ E ++ WNA+I GLA+HG +EA++LF +++ IVP++IT++ +LS C H G
Sbjct: 304 RACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGL 363
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ F +++ +G+ PK+EHY CMVD L R G+V EA + + +M +P M GALL
Sbjct: 364 VEEAWYFFDCLRK-HGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALL 422
Query: 393 AACKNHGN 400
+ C HGN
Sbjct: 423 SGCMKHGN 430
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 157/345 (45%), Gaps = 48/345 (13%)
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN--CLVRCYSV 162
+ R+ F NQ T +L C ++ L K+IH + G+ D + + L S
Sbjct: 5 SFRKIAFL-NQ-TLISLLDGCKSMFEL---KRIHALLFTLGISQDETIKSKLLLFSALSP 59
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+ DL+ + ++ + N T W T+I ++ + N ++ +F +ML G P+ +T +
Sbjct: 60 ARDLDYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFL 119
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
+ A ++ ELG VHV + G E+ + +L+HMY +A A+ +FD MP +N+
Sbjct: 120 VKATSKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNL 179
Query: 283 ATWNAMISGLASHGHAE-------------------------------EALDLFRKLEKE 311
TWNAM+ G A G EA+ LF ++ +
Sbjct: 180 VTWNAMLDGYAKCGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFD 239
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK----IEHYGCMVDLLGRCG 367
+ N++T V L AC H G ++ GR M Y +E + I +VD+ +CG
Sbjct: 240 GPMANEVTLVSALCACAHLGALEHGR-----MMHRYIVENELPLTIVLQTSLVDMYAKCG 294
Query: 368 KVLEAEELIKRM-VWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ EA + + + + DV++W A++ HG I+ A + E+
Sbjct: 295 AIHEALTVFRACSLQEADVLIWNAIIGGLATHGLIKEAMNLFCEM 339
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 246/427 (57%), Gaps = 15/427 (3%)
Query: 18 LSLLADKCKSMHQLKQ---IHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFN 73
LL + C + L +H +++ S QD + A++L+ +C L G + +A ++F+
Sbjct: 77 FELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDL---GSVDHACKVFD 133
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+ F+WN + RA A + + + LY M G N+ T+T+VLKAC V L+
Sbjct: 134 ETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACV-VSELSI 192
Query: 134 C-----KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
C K+IH H+ + G + +HV+ L+ Y+ ++ A VF + ++ + W+ MI
Sbjct: 193 CPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMI 252
Query: 189 SGYAQSFRANEALMLFDQMLMEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
+ YA++ +AL LF M++E + PN +T+ SVL ACA LE G+ VH +V RG
Sbjct: 253 ACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRG 312
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
+ + L+ MY + G ++ + +FD M +R++ +WN++IS HG ++A+ +F
Sbjct: 313 LDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFE 372
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+ + P+ ITF+ VL AC HAG ++ + +F SM Y I P++EHY CMVD+LGR
Sbjct: 373 NMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRA 432
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
++ EA ELI+ M +KP +WG+LL +C+ H N+E+AER + LEP N G YV+LS
Sbjct: 433 NRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLS 492
Query: 427 NMYAEAE 433
++YA++
Sbjct: 493 HIYAKSR 499
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 189/383 (49%), Gaps = 29/383 (7%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P + TF ++ +C SL+ +H + SGLD D ++ L+ Y +++A +V
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC- 231
FDE R +T+ VW + A + R + L+L+ QM G N T VL AC S
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191
Query: 232 ---LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
L G+++H + G+E + T L+ +Y + G ++ A ++F +MP++NI +W+AM
Sbjct: 192 ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAM 251
Query: 289 ISGLASHGHAEEALDLFR--KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
I+ A + +AL+LF+ LE VPN IT V VL AC ++ G+ + + R
Sbjct: 252 IACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLR- 310
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
G++ + ++ + GRCG++ + + M K DV+ W +L++ HG + A +
Sbjct: 311 RGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK-KRDVISWNSLISIYGMHGLGKKAIQ 369
Query: 407 VVKEII--ALEPNNHGVYVVL-----SNMYAEA----ESM--------KMQLEILLVQVL 447
+ + +I + P+ VL + + EA ESM +M+ +V +L
Sbjct: 370 IFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDIL 429
Query: 448 FAG--LASAADILQNPDFESPPT 468
L A +++QN DF+ PT
Sbjct: 430 GRANRLDEAIELIQNMDFKPGPT 452
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 244/463 (52%), Gaps = 72/463 (15%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M + + D LL A++ G +++A +F+ I P+ FM+NTLIR A + P
Sbjct: 1 MALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPR 60
Query: 98 KAIFLYMNM----RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
A+ LY M G P++ TF FVL+AC+ + + + Q+H HV K+G + D V
Sbjct: 61 DAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVK 120
Query: 154 NCLVRCYSV-------------------------------SSDLNNARQVFDE------- 175
N L+ ++ D+ AR +FDE
Sbjct: 121 NALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLV 180
Query: 176 ------------------------IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ R + W MISGY + AL LF+QM G
Sbjct: 181 SWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMG 240
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHV----FVKMRGFEMGAILGTALVHMYTKNGAL 267
+P+ VT+ S+LSACA SG L++G+++H GF + +LG AL+ MY K G++
Sbjct: 241 EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPV--VLGNALIDMYAKCGSM 298
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A +F SM +++++TWN+++ GLA HGH E++D+F K+ K ++ P++ITFV VL AC
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIAC 358
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G +D GR+ F M+ Y +EP I+HYGCMVD+LGR G + EA E I M +P+ V+
Sbjct: 359 SHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
W LL+AC+ HG IE+A+ ++++ + G YV+LSN+YA
Sbjct: 419 WRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYA 461
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 21/293 (7%)
Query: 161 SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG----FEPNS 216
+V + +A VFD+I ++ T+I G A + +A+ L+ +ML G P+
Sbjct: 23 AVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDK 82
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+T VL AC G + G +VH V G E A + AL+ M+ G L A ALFD
Sbjct: 83 LTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDG 142
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+ W+AMI+G A G A DLF + + +V ++ +++A G + +
Sbjct: 143 RAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNV----MITAYAKRGDMALA 198
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL---IKRMVWKPDVVMWGALLA 393
R++F + E + + M+ RCG L A EL ++RM KPD+V +LL+
Sbjct: 199 RELFDQVP-----ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLS 253
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN----MYAEAESMKMQLEIL 442
AC + G+++V +R+ + + N G VVL N MYA+ SMK E+
Sbjct: 254 ACADSGDLDVGQRLHSSLSDMFSRN-GFPVVLGNALIDMYAKCGSMKSAHEVF 305
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/435 (35%), Positives = 250/435 (57%), Gaps = 13/435 (2%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFC-- 57
+ C SL +P + S + +KC + +LKQ IHA I SS +D LL F
Sbjct: 96 INCGSL-EPERTL--YSKMLNKCTYLRKLKQGRAIHAH-IQSSTFEDDLV---LLNFILN 148
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
+ G L A LF+ + + + W LI + S +A+ L+ M GF PN+ T
Sbjct: 149 MYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFT 208
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ +LKA S + +Q+H K G D+++HV + L+ Y+ + + A+ +F+ +
Sbjct: 209 LSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ + W +I+G+A+ + LF QML +GFEP T +SV +ACA SG LE G+
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKW 328
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH V G + A +G L+ MY K+G++ AK +F + +++I +WN++ISG A HG
Sbjct: 329 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 388
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EAL LF ++ K ++ PN+ITF+ VL+AC H+G +D G+ F MK+ + IE ++ H+
Sbjct: 389 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHV 447
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
+VDLLGR G++ EA + I+ M KP +WGALL +C+ H N+++ ++I L+P+
Sbjct: 448 TVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPH 507
Query: 418 NHGVYVVLSNMYAEA 432
+ G +V+LSN+YA A
Sbjct: 508 DSGPHVLLSNIYASA 522
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 223/400 (55%), Gaps = 9/400 (2%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS-SLNPDKAIFLY 103
DH S + + L G A ++FN I S + WN +++A +N + L
Sbjct: 162 HDHTVHSLITIYSYLDDPG---AARKVFNGIPSRDVVSWNAMMKAYGRVGMNGEVGRMLR 218
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
++ PN T VL AC + L + + +G++ D V + LV Y
Sbjct: 219 DMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETDSLVGSALVGMYEKC 278
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
++ AR+VFD I ++ + W MI+GYAQ+ +NEA+ LF M G P+ +TLA VL
Sbjct: 279 GEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVL 338
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SAC+ G LELG ++ + RG +GTALV MY K G L KA +F M +N+A
Sbjct: 339 SACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVFRKMRCKNVA 398
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
+WNA+I GLA +G +EA+ F + E + P+DITF+GVLSAC HAG + G++ F S
Sbjct: 399 SWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNS 458
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ + I PKIEHY CMVD L R G + E + I+++ K D VM GALLAAC+ N+E
Sbjct: 459 LTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKNVE 518
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEA----ESMKMQ 438
+ ERV+ II LEP N YVV S +YA + +S KM+
Sbjct: 519 IGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMR 558
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 244/433 (56%), Gaps = 6/433 (1%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQM-IISSRIQDHFAASRLLAFCALSSSGD 64
S++R +P L L A + + + HA + I DH S + + L G
Sbjct: 146 SAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGA 205
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLK 123
A ++F+ I + + WN +++A + ++ +M + G APN T VL
Sbjct: 206 ---ARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLA 262
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
AC + L + + + +++D V + L+ Y ++ AR+VFD I ++ +
Sbjct: 263 ACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVA 322
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI+GYAQ+ +NEA+ LF M + G P+ +TLA VLSAC+ G LELG ++ +
Sbjct: 323 WNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYAS 382
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
RG +GTALV MY K G L KA +F MP +N+A+WNA+I GLA +G +EA+
Sbjct: 383 RRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQ 442
Query: 304 LFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
F+ + E+ + P+DITF+GVLSAC HAG + G++ F S+ + I PKIEHY CMVDL
Sbjct: 443 HFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDL 502
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G + EA + I+++ K D VM GALLAAC+ N+E+ ERV+ II LEP N Y
Sbjct: 503 LARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNY 562
Query: 423 VVLSNMYAEAESM 435
VV S +YA ++ +
Sbjct: 563 VVSSKIYASSDRL 575
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 207/388 (53%), Gaps = 9/388 (2%)
Query: 19 SLLADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN---- 73
S L KC+S+ +KQ+HA ++ +S +HF + L F + SSS + A+
Sbjct: 52 SNLLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLA 111
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
S +P F +N IR ASS P ++ L+++M R+ P+ +T F+L A + + +
Sbjct: 112 SHSAPTAFSYNVAIRFFASS-RPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSL 170
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ H + K GL+ H V+ L+ YS D AR+VFD I R + W M+ Y +
Sbjct: 171 ARAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGR 230
Query: 194 SFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
E +F M+ EG PN VT+A VL+AC G L LG V + EM ++
Sbjct: 231 VGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL 290
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+G+AL+ MY K G +A+A+ +FD++ +++I WNAMI+G A +G + EA+ LF +
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAG 350
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ P+ IT GVLSAC G +++G ++ G R G+ + +VD+ +CG + +A
Sbjct: 351 MRPDKITLAGVLSACSAVGALELGSELDGYASR-RGLYSNVYVGTALVDMYAKCGDLDKA 409
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGN 400
E+ ++M K +V W AL+ +G
Sbjct: 410 IEVFRKMPCK-NVASWNALICGLAFNGR 436
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 242/418 (57%), Gaps = 36/418 (8%)
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RT------ 109
C + G++ + ++F+ + N WN +I + + A+ L+ M RT
Sbjct: 8 CMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRTAVTWIE 67
Query: 110 ---GFAPNQHTFT---FVLKACSNVRSL------------NCCKQIHTHVSKSGLDLDLH 151
GFA + T T F S +R++ N + V + +
Sbjct: 68 MIDGFARSGDTETARRFFDDVPSELRNVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFF 127
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ ++ Y ++ AR +FD I R L W ++ISGYAQ+ + EAL F +M EG
Sbjct: 128 AWSSMISGYCKKGNVKEARSIFDRIPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEG 187
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
FEP+ VT+ASVLSAC+Q G L+ G+K+H + +G ++ + LV MY K G LA A+
Sbjct: 188 FEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANAR 247
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ M RN A WN+MISG A HG ++EAL+ F ++E P++ITF+ VLSAC H G
Sbjct: 248 LIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSVLSACAHGG 307
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
F++ G +IF M++ YG+ I+HYGC++DLLGR G++ EA +LIKRM KP+ V+WGAL
Sbjct: 308 FVNAGLEIFSRMEK-YGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGAL 366
Query: 392 LAACKNHGNIEVAERVVKEIIALEPN-NHGV---YVVLSNMYA------EAESMKMQL 439
L AC+ H ++E+A+RVV+EI+ ++ N + G YV+LSN+YA +AE M+M++
Sbjct: 367 LGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEM 424
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
++GT+LV MY K G + ++ +FD MPERN TWNAMI G +G ++ A+ LF K+
Sbjct: 1 MIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMS-- 58
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
+ +T++ ++ +G + R+ F + + + MVD R ++
Sbjct: 59 --IRTAVTWIEMIDGFARSGDTETARRFFDDVPSEL---RNVVTWTVMVDGYARNAEMEA 113
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
A E+ + M + + W ++++ GN++ A + I
Sbjct: 114 AREVFEGMP-QRNFFAWSSMISGYCKKGNVKEARSIFDRI 152
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 246/457 (53%), Gaps = 48/457 (10%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L ++C SM ++KQIH I + F +S+LLAF A S DL YA LF+ I PN
Sbjct: 10 LLEQCSSMREMKQIHGHAITHGLARFAFISSKLLAFYARS---DLRYAHTLFSHIPFPNL 66
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F +NT+I A +P + ++ M +PN TF+ +L S Q+H+H
Sbjct: 67 FDYNTIITA----FSPHYSSLFFIQMLNAAVSPNSRTFSLLLSKSSPSLPF--LHQLHSH 120
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ + G D +V+ L+ YS AR++FD+ + + WT++++GY + N+A
Sbjct: 121 IIRRGHVSDFYVITSLLAAYSNHGSTRAARRLFDQSPYKNVACWTSLVTGYCNNGLVNDA 180
Query: 201 LMLFDQM------------LMEGF---------------------EPNSVTLASVLSACA 227
LFD + ++ G+ +PN+ LASVLSACA
Sbjct: 181 RNLFDAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNSLLASVLSACA 240
Query: 228 QSGCLELGEKVHVFVKMRG----FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
G E G+ +H +V +E+ LGTAL+ YTK G + A+ +F +M +++A
Sbjct: 241 SVGAFEEGKWIHAYVDQNKSQCYYELE--LGTALIDFYTKCGCVEPAQRVFGNMKTKDVA 298
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
W+AM+ GLA + +EAL+LF ++EK PN +TF+GVL+AC H ++FG M
Sbjct: 299 AWSAMVLGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEALKLFGYM 358
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
YGI IEHYGC+VD+L R GK+ EA E IK M +PD V+WG+LL C H NIE+
Sbjct: 359 SDKYGIVASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGSLLNGCFLHNNIEL 418
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLE 440
+V K ++ LEP + G YV+LSN+YA + LE
Sbjct: 419 GHKVGKYLVELEPGHGGRYVLLSNVYATMGKWEAVLE 455
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 229/401 (57%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H+ +I D FAA L+ S + A R ++S+ + WN LI +
Sbjct: 304 RQLHSSLIKMDAHSDLFAAVGLVDM--YSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ L+ M NQ T + VLK+ ++++++ CKQIHT KSG+ D +
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFY 421
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V+N L+ Y + ++ A ++F+E L +T+MI+ Y+Q EAL L+ QM
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+ +S+L+ACA E G+++HV GF +LV+MY K G++ A
Sbjct: 482 IKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDAD 541
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F +P R I +W+AMI G A HGH +EAL LF ++ ++ + PN IT V VL AC HAG
Sbjct: 542 RAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAG 601
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G+Q F M+ ++GI+P EHY CM+DLLGR GK+ EA EL+ + ++ D +WGAL
Sbjct: 602 LVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGAL 661
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L A + H NIE+ ++ K + LEP G +V+L+N+YA A
Sbjct: 662 LGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASA 702
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 205/409 (50%), Gaps = 13/409 (3%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS 60
+ +KC+ P + + S+ D ++ +++H +++ D F A+ L+ A
Sbjct: 76 LGVKCNEFTFPSV-LKACSMKRD----LNMGRKVHGMAVVTGFESDGFVANTLVVMYA-- 128
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
G L + RLF I N WN L S +A+ L+ M R+G PN+ + +
Sbjct: 129 KCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISI 188
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+L AC+ ++ + ++IH + K GLDLD N LV YS + ++ A VF +I +
Sbjct: 189 ILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPD 248
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ W +I+G + ALML D+M G PN TL+S L ACA G ELG ++H
Sbjct: 249 VVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHS 308
Query: 241 -FVKMRGF-EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
+KM ++ A +G LV MY+K + A+ +DSMP+++I WNA+ISG + G
Sbjct: 309 SLIKMDAHSDLFAAVG--LVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDH 366
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
+A+ LF K+ E I N T VL + I V +QI ++ GI
Sbjct: 367 LDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIH-TISIKSGIYSDFYVINS 425
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
++D G+C + EA ++ + W+ D+V + +++ A +G+ E A ++
Sbjct: 426 LLDTYGKCNHIDEASKIFEERTWE-DLVAYTSMITAYSQYGDGEEALKL 473
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 181/371 (48%), Gaps = 11/371 (2%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
++HA +I +D + L+ S YA +L + + W++L+
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTL--YSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQ 59
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+ ++A+ ++ M G N+ TF VLKACS R LN +++H +G + D V
Sbjct: 60 NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
N LV Y+ L+++R++F I R + W + S Y QS EA+ LF +M+ G
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Query: 213 EPNSVTLASVLSACA--QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
PN +++ +L+ACA Q G +LG K+H + G ++ ALV MY+K G + A
Sbjct: 180 MPNEFSISIILNACAGLQEG--DLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGA 237
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
A+F + ++ +WNA+I+G H + AL L +++ PN T L AC
Sbjct: 238 VAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAM 297
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
GF ++GRQ+ S+ ++ G +VD+ +C + +A M K D++ W A
Sbjct: 298 GFKELGRQLHSSLIKMDAHSDLFAAVG-LVDMYSKCEMMDDARRAYDSMP-KKDIIAWNA 355
Query: 391 LLAA---CKNH 398
L++ C +H
Sbjct: 356 LISGYSQCGDH 366
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 193/406 (47%), Gaps = 9/406 (2%)
Query: 18 LSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
+S++ + C + + ++IH M+ D F+A+ L+ S +G++ A +F
Sbjct: 186 ISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDM--YSKAGEIEGAVAVFQD 243
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I P+ WN +I D A+ L M+ +G PN T + LKAC+ +
Sbjct: 244 IAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELG 303
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+Q+H+ + K DL LV YS +++AR+ +D + + + W +ISGY+Q
Sbjct: 304 RQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQC 363
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+A+ LF +M E + N TL++VL + A +++ +++H G +
Sbjct: 364 GDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVI 423
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+L+ Y K + +A +F+ ++ + +MI+ + +G EEAL L+ +++ I
Sbjct: 424 NSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIK 483
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+ +L+AC + + G+Q+ + +G I +V++ +CG + +A+
Sbjct: 484 PDPFICSSLLNACANLSAYEQGKQLHVHAIK-FGFMCDIFASNSLVNMYAKCGSIEDADR 542
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
+ +V W A++ HG+ + A R+ +++ + PN+
Sbjct: 543 AFSE-IPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNH 587
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 253/464 (54%), Gaps = 41/464 (8%)
Query: 5 CSSLRQPPLPIPPLSLLADKCKSMH-QLKQIHAQMI---ISSRIQDHFAASRLLAFCALS 60
CS L P P L A CKS + + +H I I S + F + L+A +
Sbjct: 81 CSGL-SPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLV---FVQNALIAVYVVC 136
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
G + A +LF+ I WN++I A N +A L+ MR G P+ TF
Sbjct: 137 --GLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVN 194
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+L CS R L+ + +H + +G+ +D+ V N LV Y+ +L++A+ +FD + +
Sbjct: 195 LLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKN 254
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQM---------------LMEG-------------- 211
+ WT+MIS YAQ A +FDQM L EG
Sbjct: 255 VVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRN 314
Query: 212 --FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
P+ TL S+L+AC+Q G L +G+K+H ++ G L +L+ MY K G +
Sbjct: 315 SRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVT 374
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A +F MP +N+ +WN +I LA HG EA+ LF +++ + +P++IT G+LSAC H
Sbjct: 375 ALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSH 434
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+G +D+G F M +Y + +IEHY CMVDLLGR G + EA ELI RM KPDVV+WG
Sbjct: 435 SGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWG 494
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
ALL AC+ HGN+E+ ++++K+++ LEP++ G+YV++SN+Y EA+
Sbjct: 495 ALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQ 538
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 215/406 (52%), Gaps = 39/406 (9%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M LK +HAQ+I+ + +L++FCA+ +GDL YA R+F+ I PN FM+N+LI
Sbjct: 1 MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R ++S +P A+ L+ M +G +PN+ T FVLKAC + +H K G+
Sbjct: 61 RGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIG 120
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ V N L+ Y V ++ AR++FD+I ++TL W +MI GYA EA +LF +M
Sbjct: 121 SLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKM 180
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
G EP+ T ++LS C+QS L+LG VH +++ G ++ I+ ALV MY K G L
Sbjct: 181 REWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNL 240
Query: 268 AKAKALFD-------------------------------SMPERNIATWNAMISGLASHG 296
A+A+FD MP +N+ +WN+MIS G
Sbjct: 241 HSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREG 300
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG---SMKRVYGIEPKI 353
EALDLF K+ ++VP++ T V +L+AC G + +G++I S K YG+
Sbjct: 301 QYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTL-- 358
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
Y ++D+ +CG V+ A ++ M K ++V W ++ A HG
Sbjct: 359 --YNSLIDMYAKCGPVVTALDIFLEMPGK-NLVSWNVIIGALALHG 401
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 146/279 (52%), Gaps = 4/279 (1%)
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSV--SSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
K +H + GL + + L+ +V + DL A+++FD+I ++ ++I GY+
Sbjct: 5 KLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYS 64
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
S +A++LF +M+ G PN TL VL AC VH G
Sbjct: 65 NSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVF 124
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+ AL+ +Y G + A+ LFD + ++ + +WN+MI G A G+ +EA LFRK+ +
Sbjct: 125 VQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWG 184
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ P+ TFV +LS C + +D+GR + ++ + G++ I +VD+ +CG + A
Sbjct: 185 MEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIE-ITGVKIDIIVRNALVDMYAKCGNLHSA 243
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ + R K +VV W ++++A HG+IEVA ++ ++
Sbjct: 244 QAIFDRTQEK-NVVSWTSMISAYAQHGSIEVARQIFDQM 281
>gi|297842491|ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334968|gb|EFH65386.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 466
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 229/389 (58%), Gaps = 10/389 (2%)
Query: 51 SRLLAFCALSSSGDLSYATRLFNSI-------QSPNHFMWNTLIRAQASSLNPDKAIFLY 103
++LLA LS+ L+ R+ I Q P F+WN ++R+ +P ++ +Y
Sbjct: 46 NKLLA-TLLSNCTSLARVRRIHGDIFRSCILDQYPIAFLWNNIMRSYIRHDSPLDSVQVY 104
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
+ M R+ P+++T V+KA + KQ+H+ + G D + + Y +
Sbjct: 105 LGMVRSNVLPDRYTLPIVIKAAVQIHDFPLGKQLHSVAVRLGFVGDEFCESGFITLYCKA 164
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
+L NAR VFDE R L W +I G + RANEA+ +F +M GFEP+ T+ SV
Sbjct: 165 GELENARNVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFMEMRRSGFEPDDFTMVSVT 224
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGA--ILGTALVHMYTKNGALAKAKALFDSMPERN 281
SAC G L L ++H V E + ++ +L+ MY K G + A +F+ MP+RN
Sbjct: 225 SACGGLGDLNLAFQLHKCVLQAKTEEKSDVMMMNSLIDMYGKCGRMDFAIQVFEEMPQRN 284
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+ +W++MI+G A++G+ EAL+ FR++ + + PN ITFVGVLSAC H G ++ G+ F
Sbjct: 285 VVSWSSMITGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKAYFA 344
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
MK + +EP + HYGC+VDLL R G++ EA+++++ M KP+V++WG L+ C+ G++
Sbjct: 345 MMKSEFNLEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDV 404
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYA 430
E+AE V ++ LEP N GVYVVL+N+YA
Sbjct: 405 EMAEWVAPYMVELEPWNDGVYVVLANVYA 433
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 256/467 (54%), Gaps = 42/467 (8%)
Query: 4 KCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
+C + P P +C ++ LKQ+HA +++ R LL F +L S
Sbjct: 218 RCPRRHRSP-PTADFVAALHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSC 276
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDK-------AIFLYMNMRRTGFAPNQH 116
L YA RLF++ SPN F+++ ++ A A++ + + A+FL M +RR APNQ
Sbjct: 277 -LPYARRLFDATPSPNVFLYSAMLSAYAAASSHSQEHARDSLALFLRM-LRRGRPAPNQF 334
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
+ VL+A + + + IH H K G + L+ YS + +AR++FD +
Sbjct: 335 VYPLVLRAACAI-GVQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGL 393
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQM----------------------------- 207
+R + WT ++SGYA++ + +A++LF++M
Sbjct: 394 TDRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFR 453
Query: 208 --LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+ EGF PN T++ +LSAC G L++G+ +H + G+ + L+ MY K G
Sbjct: 454 RMVDEGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCG 513
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L +AK +FD+ +R + TWN++I+ LA HG +E A+ +F + E + P+++TFVG+L+
Sbjct: 514 NLMEAKWIFDAFSDRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLN 573
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H GF+D G + F M +GIEP+IEHYGC+VDLL R G+ +A I M +PD
Sbjct: 574 ACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDE 633
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
V+WG+LL AC+ H ++E+AE ++ ++ L P+N V+L+N+Y+E
Sbjct: 634 VIWGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEG 680
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 244/433 (56%), Gaps = 6/433 (1%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQM-IISSRIQDHFAASRLLAFCALSSSGD 64
S++R +P L L A + + + HA + I DH S + + L G
Sbjct: 146 SAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGA 205
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLK 123
A ++F+ I + + WN +++A + ++ +M + G APN T VL
Sbjct: 206 ---ARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLA 262
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
AC + L + + + +++D V + L+ Y ++ AR+VFD I ++ +
Sbjct: 263 ACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVA 322
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI+GYAQ+ +NEA+ LF M + G P+ +TLA VLSAC+ G LELG ++ +
Sbjct: 323 WNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYAS 382
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
RG +GTALV MY K G L KA +F MP +N+A+WNA+I GLA +G +EA+
Sbjct: 383 RRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQ 442
Query: 304 LFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
F+ + E+ + P+DITF+GVLSAC HAG + G++ F S+ + I PKIEHY CMVDL
Sbjct: 443 HFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDL 502
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G + EA + I+++ K D VM GALLAAC+ N+E+ ERV+ II LEP N Y
Sbjct: 503 LARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNY 562
Query: 423 VVLSNMYAEAESM 435
VV S +YA ++ +
Sbjct: 563 VVSSKIYASSDRL 575
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 208/388 (53%), Gaps = 9/388 (2%)
Query: 19 SLLADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN---- 73
S L KC+S+ +KQ+HA ++ +S +HF + L F + SSS + A+
Sbjct: 52 SNLLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLA 111
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
S +P F +N IR ASS P ++ L+++M R+ P+ +T F+L A + + +
Sbjct: 112 SHSAPTAFSYNVAIRFFASS-RPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSL 170
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ H + K GL+ H V+ L+ YS D AR+VFD I R + W M+ Y +
Sbjct: 171 ARAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGR 230
Query: 194 SFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
E +F M+ EG PN+VT+A VL+AC G L LG V + EM ++
Sbjct: 231 VGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL 290
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+G+AL+ MY K G +A+A+ +FD++ +++I WNAMI+G A +G + EA+ LF +
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAG 350
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ P+ IT GVLSAC G +++G ++ G R G+ + +VD+ +CG + +A
Sbjct: 351 MRPDKITLAGVLSACSAVGALELGSELDGYASR-RGLYSNVYVGTALVDMYAKCGDLDKA 409
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGN 400
E+ ++M K +V W AL+ +G
Sbjct: 410 IEVFRKMPCK-NVASWNALICGLAFNGR 436
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 239/464 (51%), Gaps = 38/464 (8%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
R P IP + L + + +I I+ +I D S +G + A
Sbjct: 315 RDPVKSIPSQTAL---LTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEA 371
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
LF+ + N W +I A + ++A+ L + R G P+ + T ACS++
Sbjct: 372 KELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHI 431
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR----------- 177
+L +Q+H+ K+G + +V N L+ Y ++ RQVF+ +R
Sbjct: 432 GALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFI 491
Query: 178 --------------------NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
+R + WTT+IS YAQ+ R +EA+ F ML E +PNS
Sbjct: 492 AALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSP 551
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
L +LS C G +LG+++H G + I+ AL+ MY K G A + +FDSM
Sbjct: 552 ILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADSHKVFDSM 610
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
ER+I TWN I+G A HG EA+ ++ +E ++PN++TFVG+L+AC HAG +D G
Sbjct: 611 EERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGW 670
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
Q F SM R YG+ P +EHY CMVDLLGR G V AE+ I M +PD V+W ALL ACK
Sbjct: 671 QFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKI 730
Query: 398 HGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
H N E+ R +++ EP+N G YV+LSN+Y+ S+ M +E+
Sbjct: 731 HKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYS---SLGMWVEV 771
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 176/369 (47%), Gaps = 18/369 (4%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF + N W +I K ++ M G +P+Q F VL A +
Sbjct: 176 AWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTG 235
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV-SSDLNNARQVFDEIRNRTLNVWTT 186
++ L + + V K+G + D+ + ++ Y+ +S L+ A + FD + R W+T
Sbjct: 236 LQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWST 295
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MI+ + R + A+ ++ + ++ P+ L + L+ C + + E +F ++
Sbjct: 296 MIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARCGR-----ITEARILFEQIP- 348
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
+ + A++ Y +NG + +AK LFD MP RN +W MI+G A +G +EEALDL +
Sbjct: 349 -DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQ 407
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC--MVDLLG 364
L + ++P+ + AC H G ++ GRQ+ S+ G + Y C ++ + G
Sbjct: 408 ALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH-SLAVKAGCQ--FNSYVCNALISMYG 464
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+C + ++ RM K D V W + +AA + +E A + +++ + + +
Sbjct: 465 KCRNMEYVRQVFNRMRVK-DTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVS---WTT 520
Query: 425 LSNMYAEAE 433
+ + YA+AE
Sbjct: 521 IISAYAQAE 529
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 154/372 (41%), Gaps = 54/372 (14%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L A + F+ + N + W+T+I A + D AI +Y P+Q L
Sbjct: 275 LDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY-GRDPVKSIPSQTALLTGLAR 333
Query: 125 CSNVRSLNCC-KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
C + +QI + S N ++ Y + ++ A+++FD + R
Sbjct: 334 CGRITEARILFEQIPDPIVVSW--------NAMITGYMQNGMVDEAKELFDRMPFRNTIS 385
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI+GYAQ+ R+ EAL L + G P+ +L S AC+ G LE G +VH
Sbjct: 386 WAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAV 445
Query: 244 MRGFEMGAILGTALVHMYTK-------------------------------NGALAKAKA 272
G + + + AL+ MY K N L A+
Sbjct: 446 KAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARH 505
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FD+M R++ +W +IS A +EA++ F+ + E PN +LS C G
Sbjct: 506 IFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGS 565
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG-----KVLEAEELIKRMVWKPDVVM 387
+G+QI ++ +G++ ++ ++ + +CG KV ++ E + D+
Sbjct: 566 AKLGQQIH-TVAIKHGMDSELIVANALMSMYFKCGCADSHKVFDSME-------ERDIFT 617
Query: 388 WGALLAACKNHG 399
W + C HG
Sbjct: 618 WNTFITGCAQHG 629
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 174/380 (45%), Gaps = 54/380 (14%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L+ G L A +F+++ + WN++I A +S + A L+ + N T
Sbjct: 43 LARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS----GGNVRTA 98
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
T +L + + + +++ + + + N +V CY + D+ AR++FD + +
Sbjct: 99 TILLSGYARLGRVLDARRVFDGMPER----NTVAWNAMVSCYVQNGDITMARRLFDAMPS 154
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQM-----------------------------LM 209
R + W +M++GY S + +A LF QM +M
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMM 214
Query: 210 --EGFEPNSVTLASVLSACAQSGCLELG--EKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
EG P+ ASVLSA +G +LG E + V GFE ++GT+++++YT++
Sbjct: 215 HHEGASPDQSNFASVLSAV--TGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA 272
Query: 266 -ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
AL A FD M ERN TW+ MI+ L+ G + A+ ++ + + + +P+ + L
Sbjct: 273 SALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR-DPVKSIPSQTALLTGL 331
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
+ C G I R +F + +P + + M+ + G V EA+EL RM ++ +
Sbjct: 332 ARC---GRITEARILFEQIP-----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR-N 382
Query: 385 VVMWGALLAACKNHGNIEVA 404
+ W ++A +G E A
Sbjct: 383 TISWAGMIAGYAQNGRSEEA 402
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+A + + G L +A+ +FD+MP R+I WN+MIS + G E+A LF + +
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVR 96
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
I +LS G + R++F M E + MV + G + A
Sbjct: 97 TATI----LLSGYARLGRVLDARRVFDGMP-----ERNTVAWNAMVSCYVQNGDITMARR 147
Query: 375 LIKRMVWKPDVVMWGALLAA 394
L M + DV W +++
Sbjct: 148 LFDAMPSR-DVTSWNSMVTG 166
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 244/433 (56%), Gaps = 6/433 (1%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQM-IISSRIQDHFAASRLLAFCALSSSGD 64
S++R +P L L A + + + HA + I DH S + + L G
Sbjct: 146 SAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGA 205
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLK 123
A ++F+ I + + WN +++A + ++ +M + G APN T VL
Sbjct: 206 ---ARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLA 262
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
AC + L + + + +++D V + L+ Y ++ AR+VFD I ++ +
Sbjct: 263 ACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVA 322
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI+GYAQ+ +NEA+ LF M + G P+ +TLA VLSAC+ G LELG ++ +
Sbjct: 323 WNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYAS 382
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
RG +GTALV MY K G L KA +F MP +N+A+WNA+I GLA +G +EA+
Sbjct: 383 RRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQ 442
Query: 304 LFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
F+ + E+ + P+DITF+GVLSAC HAG + G++ F S+ + I PKIEHY CMVDL
Sbjct: 443 HFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDL 502
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G + EA + I+++ K D VM GALLAAC+ N+E+ ERV+ II LEP N Y
Sbjct: 503 LARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNY 562
Query: 423 VVLSNMYAEAESM 435
VV S +YA ++ +
Sbjct: 563 VVSSKIYASSDRL 575
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 206/386 (53%), Gaps = 9/386 (2%)
Query: 21 LADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN----SI 75
L KC+S+ +KQ+HA ++ +S +HF + L F + SSS + A+ S
Sbjct: 54 LLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLASH 113
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
+P F +N IR ASS P ++ L+++M R+ P+ +T F+L A + + + +
Sbjct: 114 SAPTAFSYNVAIRFFASS-RPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLAR 172
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
H + K GL+ H V+ L+ YS D AR+VFD I R + W M+ Y +
Sbjct: 173 AAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVG 232
Query: 196 RANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
E +F M+ EG PN VT+A VL+AC G L LG V + EM +++G
Sbjct: 233 MNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVG 292
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+AL+ MY K G +A+A+ +FD++ +++I WNAMI+G A +G + EA+ LF + +
Sbjct: 293 SALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMR 352
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+ IT GVLSAC G +++G ++ G R G+ + +VD+ +CG + +A E
Sbjct: 353 PDKITLAGVLSACSAVGALELGSELDGYASR-RGLYSNVYVGTALVDMYAKCGDLDKAIE 411
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGN 400
+ ++M K +V W AL+ +G
Sbjct: 412 VFRKMPCK-NVASWNALICGLAFNGR 436
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 221/375 (58%), Gaps = 2/375 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A R F I+SP+ WN +I A A+S + ++AI+ + M G P+ TF +L
Sbjct: 332 GFLPSAKRAFYQIESPDLVSWNAIIAALANS-DVNEAIYFFCQMIHMGLMPDDITFLNLL 390
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-RNRTL 181
AC + +LN QIH+++ K GLD V N L+ Y+ S+L++A VF +I N L
Sbjct: 391 CACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNL 450
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W ++S +Q + EA LF ML +P+++T+ ++L CA+ LE+G +VH F
Sbjct: 451 VSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCF 510
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
G + + L+ MY K G L A+ +FDS +I +W+++I G A G +EA
Sbjct: 511 SVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEA 570
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L+LFR + + PN++T++GVLSAC H G ++ G ++ +M+ GI P EH CMVD
Sbjct: 571 LNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVD 630
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LL R G + EAE IK+ + PD+ MW LLA+CK HGN+++AER + I+ L+P+N
Sbjct: 631 LLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAA 690
Query: 422 YVVLSNMYAEAESMK 436
V+LSN++A A + K
Sbjct: 691 LVLLSNIHASAGNWK 705
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 204/426 (47%), Gaps = 7/426 (1%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
LK SS++ P L L +S+ K+IH ++ S+ D + +L
Sbjct: 71 LKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNM--YGKC 128
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A + F+++Q + W +I + + + AI +Y+ M R+G+ P+Q TF ++
Sbjct: 129 GSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSII 188
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC ++ Q+H HV KSG D L N L+ Y+ + +A VF I + L
Sbjct: 189 KACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLI 248
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W +MI+G+ Q EAL LF M +G ++PN SV SAC E G ++
Sbjct: 249 SWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGM 308
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
G G +L MY K G L AK F + ++ +WNA+I+ LA+ EA
Sbjct: 309 CAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALAN-SDVNEA 367
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+ F ++ ++P+DITF+ +L AC ++ G QI + ++ G++ ++
Sbjct: 368 IYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKM-GLDKVAAVCNSLLT 426
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE--PNNH 419
+ +C + +A + K + ++V W A+L+AC H A R+ K ++ E P+N
Sbjct: 427 MYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNI 486
Query: 420 GVYVVL 425
+ +L
Sbjct: 487 TITTIL 492
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 244/463 (52%), Gaps = 72/463 (15%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M + + D LL A++ G +++A +F+ I P+ FM+NTLIR A + P
Sbjct: 1 MALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPR 60
Query: 98 KAIFLYMNM----RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
A+ LY M G P++ TF FVL+AC+ + + + Q+H HV K+G + D V
Sbjct: 61 DAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVK 120
Query: 154 NCLVRCYSV-------------------------------SSDLNNARQVFDE------- 175
N L+ ++ D+ AR +FDE
Sbjct: 121 NALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLV 180
Query: 176 ------------------------IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ R + W MISGY + AL LF+QM G
Sbjct: 181 SWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMG 240
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHV----FVKMRGFEMGAILGTALVHMYTKNGAL 267
+P+ VT+ S+LSACA SG L++G+++H GF + +LG AL+ MY K G++
Sbjct: 241 EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPV--VLGNALIDMYAKCGSM 298
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A +F SM +++++TWN+++ GLA HGH E++D+F K+ K ++ P++ITFV VL AC
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIAC 358
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G +D GR+ F M+ Y +EP I+HYGCMVD+LGR G + EA E I M +P+ V+
Sbjct: 359 SHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
W LL+AC+ HG IE+A+ ++++ + G YV+LSN+YA
Sbjct: 419 WRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYA 461
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 21/293 (7%)
Query: 161 SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG----FEPNS 216
+V + +A VFD+I ++ T+I G A + +A+ L+ +ML G P+
Sbjct: 23 AVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDK 82
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+T VL AC G + G +VH V G E A + AL+ M+ G L A ALFD
Sbjct: 83 LTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDG 142
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+ W+AMI+G A G A DLF + + +V ++ +++A G + +
Sbjct: 143 RAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNV----MITAYAKRGDMALA 198
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL---IKRMVWKPDVVMWGALLA 393
R++F + E + + M+ RCG L A EL ++RM KPD+V +LL+
Sbjct: 199 RELFDQVP-----ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLS 253
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN----MYAEAESMKMQLEIL 442
AC + G+++V +R+ + + N G VVL N MYA+ SMK E+
Sbjct: 254 ACADSGDLDVGQRLHSSLSDMFSRN-GFPVVLGNALIDMYAKCGSMKSAHEVF 305
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 233/427 (54%), Gaps = 20/427 (4%)
Query: 5 CSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
CSSL QP +Q+H I +D FA L A G
Sbjct: 276 CSSLLQPEYG-----------------RQLHGMSIKFGLGRDVFAGCSLCDMYA--KCGL 316
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
LS A +F I P+ WN +I A + +AI + MR G P++ T +L A
Sbjct: 317 LSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCA 376
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-NRTLNV 183
C++ L Q+H +++K GLDLD+ V N L+ Y+ S+L +A F+E+R N L
Sbjct: 377 CTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVS 436
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W +++ + +A E L M + P+ +TL +VL A A++ +E+G +VH +
Sbjct: 437 WNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYAL 496
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
G + L+ +Y K G+L A +FDSM ++ +W+++I G A G+ EEAL
Sbjct: 497 KTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALK 556
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF+ + + + PN +TFVGVL+AC H G ++ G +++G+M++ +GI P EH CMVDLL
Sbjct: 557 LFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLL 616
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
R G + EAE I +M + PD+V+W LLAACK HGN++V +R + I+ ++P+N +V
Sbjct: 617 ARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHV 676
Query: 424 VLSNMYA 430
+L N+YA
Sbjct: 677 LLCNIYA 683
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 207/416 (49%), Gaps = 7/416 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+ K+IH M+ S D + +L S L A ++F+++ N W +
Sbjct: 77 RSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKS--LKDAQKVFDAMPERNVVSWTS 134
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + + A+ Y M ++G P+Q TF ++KACS++ + +Q+H HV KS
Sbjct: 135 VIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSE 194
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ N L+ Y+ S+ + +A VF + R L W +MI+G++Q EAL F
Sbjct: 195 FGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFK 254
Query: 206 QMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+ML +G + PN SV SAC+ E G ++H G G +L MY K
Sbjct: 255 EMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKC 314
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G L+ A+ +F + ++ WNA+I+G A G A+EA+ F ++ + ++P++IT +L
Sbjct: 315 GLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLL 374
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC + G Q+ G + ++ G++ + ++ + +C ++ +A + M D
Sbjct: 375 CACTSPSELYQGMQVHGYINKM-GLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNAD 433
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY-AEAESMKMQL 439
+V W A+L AC H E R++K + + Y+ L+N+ A AE++ +++
Sbjct: 434 LVSWNAILTACMRHDQAEEVFRLLK--LMCISQHRPDYITLTNVLGASAETVSIEI 487
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 163/300 (54%), Gaps = 5/300 (1%)
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
++TGF T+ +++ ACS +RSL K+IH H+ KS DL + N ++ Y L
Sbjct: 55 KKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSL 114
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+A++VFD + R + WT++I+GY+Q+ + AL + QML G P+ T S++ AC
Sbjct: 115 KDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKAC 174
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+ G + LG ++H V F I AL+ MYTK+ + A +F M R++ +W
Sbjct: 175 SSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWG 234
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQI-VPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
+MI+G + G+ EAL F+++ + + +PN+ F V SAC + GRQ+ G M
Sbjct: 235 SMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHG-MSI 293
Query: 346 VYGIEPKIEHYGC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+G+ + GC + D+ +CG +L ++ + +PD+V W A++A G+ + A
Sbjct: 294 KFGLGRDV-FAGCSLCDMYAKCG-LLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEA 351
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 178/395 (45%), Gaps = 7/395 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+HA ++ S H A L + S + A +F+ + + + W ++I +
Sbjct: 184 RQLHAH-VLKSEFGAHIIAQNAL-ISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFS 241
Query: 92 SSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+A+ + M G + PN+ F V ACS++ +Q+H K GL D+
Sbjct: 242 QLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDV 301
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
L Y+ L+ AR VF +I L W +I+G+A A EA+ F QM +
Sbjct: 302 FAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQ 361
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G P+ +T+ S+L AC L G +VH ++ G ++ + L+ MY K L A
Sbjct: 362 GLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDA 421
Query: 271 KALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
F+ M ++ +WNA+++ H AEE L + + Q P+ IT VL A
Sbjct: 422 IFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAE 481
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
I++G Q+ + G+ ++DL +CG + A ++ M+ PDVV W
Sbjct: 482 TVSIEIGNQVHCYALKT-GLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMI-NPDVVSWS 539
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPN-NHGVYV 423
+L+ G E A ++ K + L+ NH +V
Sbjct: 540 SLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFV 574
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 213/381 (55%), Gaps = 32/381 (8%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN-VRSLNCCKQIHTHV 141
WN LI ++ +++M R G AP T+ VL AC R + Q+H V
Sbjct: 90 WNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRV 149
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDL-------------------------------NNAR 170
SG+ DL V N LV Y+ +D+ + AR
Sbjct: 150 VGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEAR 209
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
+FD + R WT MI GY + R EAL +F +M + T+ SV++ACAQ G
Sbjct: 210 DLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLG 269
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LE+GE V V++ +G +M A +G AL+ MY+K G++ +A +F M R+ TW A+I
Sbjct: 270 ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIIL 329
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
GLA +G+ EEA+++F ++ + P+++TF+GVL+AC HAG +D GR+ F SM Y I
Sbjct: 330 GLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIA 389
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P + HYGC++DLLGR GK+ EA + I +M P+ +WG LLAAC+ HGN E+ E V +
Sbjct: 390 PNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAER 449
Query: 411 IIALEPNNHGVYVVLSNMYAE 431
++ L+P N VY++LSN+YA+
Sbjct: 450 LLELDPENSMVYILLSNIYAK 470
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 156/353 (44%), Gaps = 44/353 (12%)
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR----SLNCCKQIHTHVSKSGLDLDLHV 152
+ A+ Y M G P+ +TF +LKA + S + +H HV + G+ + HV
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ LV Y+ D AR + E T W +ISG+ + R E+ F M G
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGEC--DTPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 213 EPNSVTLASVLSACAQ-SGCLELGEKVHVFVKMRGFEMGAILGTALVHMY---------- 261
P VT SVLSAC + + + LG +VH V G + ALV MY
Sbjct: 119 APTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAW 178
Query: 262 ---------------------TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+ G + +A+ LFD MPER+ +W AMI G E
Sbjct: 179 KVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFRE 238
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL++FR+++ + ++ T V V++AC G +++G + M R GI+ ++
Sbjct: 239 ALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSR-QGIKMDAFVGNALI 297
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG----NIEVAERVVK 409
D+ +CG + A ++ K M + D W A++ +G IE+ R+++
Sbjct: 298 DMYSKCGSIERALDVFKGMHHR-DKFTWTAIILGLAVNGYEEEAIEMFHRMIR 349
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 223/373 (59%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G + A +F+ + WN++I + +P A+ ++ M T
Sbjct: 322 SKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVM 381
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L AC+++ + + +H + + L D+ V+N L+ YS ++ A ++F+ ++++
Sbjct: 382 GALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHK 441
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
TL W MI GYAQ+ R NEA+ F +M ++ +P+S T+ SV+ A A+ L + +H
Sbjct: 442 TLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIH 501
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V + + TALV MY K GA+ A+ LFD M ER++ TWNAMI G +HG +
Sbjct: 502 GLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGK 561
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
AL+LF K++KE I PN++TF+ VLSAC H+G ++ G Q FGSMK+ YG+EP ++HYG M
Sbjct: 562 AALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAM 621
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR ++ EA + I++M +P + ++GA+L AC+ H N+E+ E+ I L+P++
Sbjct: 622 VDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDG 681
Query: 420 GVYVVLSNMYAEA 432
G +V+L+N+YA A
Sbjct: 682 GYHVLLANIYATA 694
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 202/389 (51%), Gaps = 6/389 (1%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSI 75
P ++L + C SM +L Q +I + +H ++L++ FC G L A R+F I
Sbjct: 79 PSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKF---GSLHEAARVFQPI 135
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
+ +++T+++ A + + D A+ + MR G P + FT++LK C + L K
Sbjct: 136 EDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGK 195
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+IH + +G ++ + +V Y+ + A ++FD + R L W T+ISGYAQ+
Sbjct: 196 EIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNG 255
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
AL L +M EG P+S+T+ S+L A A G L +G +H + GFE + T
Sbjct: 256 FGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVST 315
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
ALV MY+K G++ A+ +FD M + + +WN+MI G +G A+++F+K+ EQ+
Sbjct: 316 ALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEM 375
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
++T +G L AC G ++ GR + + ++ + + ++ + +C +V A E+
Sbjct: 376 TNVTVMGALHACADLGDVEQGRFVHKLLDQL-ELGSDVSVMNSLISMYSKCKRVDIAAEI 434
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + K +V W A++ +G I A
Sbjct: 435 FENLQHKT-LVSWNAMILGYAQNGRINEA 462
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 201/404 (49%), Gaps = 20/404 (4%)
Query: 32 KQIHAQMIISSRIQDHFAAS---RLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
K+IH Q+I++ + FA + + A C L + A ++F+ + + WNT+I
Sbjct: 195 KEIHCQLIVNGFASNVFAMTGVVNMYAKCRL-----VEEAYKMFDRMPERDLVCWNTIIS 249
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
A + A+ L + M+ G P+ T +L A ++V SL + IH + ++G +
Sbjct: 250 GYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFES 309
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++V LV YS + AR +FD + +T+ W +MI GY Q+ A+ +F +M+
Sbjct: 310 FVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMM 369
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT--ALVHMYTKNGA 266
E E +VT+ L ACA G +E G VH + E+G+ + +L+ MY+K
Sbjct: 370 DEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQ--LELGSDVSVMNSLISMYSKCKR 427
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A +F+++ + + +WNAMI G A +G EA+D F K++ + I P+ T V V+ A
Sbjct: 428 VDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPA 487
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
+ + I G + R ++ + +VD+ +CG V A +L M+ + V
Sbjct: 488 LAELSVLPQAKWIHGLVIRT-CLDKNVFVATALVDMYAKCGAVHTARKLFD-MMDERHVT 545
Query: 387 MWGALLAACKNHG----NIEVAERVVKEIIALEPNNHGVYVVLS 426
W A++ HG +E+ E++ KE+I +PN VLS
Sbjct: 546 TWNAMIDGYGTHGLGKAALELFEKMKKEVI--KPNEVTFLCVLS 587
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 231/440 (52%), Gaps = 55/440 (12%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
C ++KQ+HAQ ++S + H A RLL A + + YA +F I SP+ F++
Sbjct: 23 CHDFQEVKQLHAQFVVSGLLGYHPLCARRLLE--AYVTMSQIYYAFSIFERIPSPDVFVY 80
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NT+IR G + T+TFVLKACS++++ KQ+H + K
Sbjct: 81 NTMIR---------------------GLTMDNFTYTFVLKACSHLKAPFEGKQVHCQIIK 119
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNA-------------------------------RQV 172
+G+ D H+ + L+ Y+ S +++A R++
Sbjct: 120 AGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMISGYLTEGRVDKARKM 179
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FD++ + W+ +I+GY ++ EAL LF M++ PN L S+LSAC Q G L
Sbjct: 180 FDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAALVSLLSACGQLGTL 239
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
G +H ++ M L TAL+ MY K+G++ LF M R++ TW MIS
Sbjct: 240 HQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMARRDVVTWGVMISAF 299
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
A HGHA + LF ++ + I PN + FV +LSAC HAG ++ GRQ F M+ +GI+P
Sbjct: 300 AIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGRQYFSQMEHGFGIKPS 359
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
IEHYGCMVDLLGR G + +AE+LI M +P+ ++WG+LL AC+ H +++ + ++
Sbjct: 360 IEHYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTHNDLKRGTWAFENLM 419
Query: 413 ALEPNNHGVYVVLSNMYAEA 432
LEP + + + M+A A
Sbjct: 420 ELEPTSGDRHKLAGLMFANA 439
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 230/401 (57%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH MI ++ D + L+ A + L A ++F+ + + +WN LI +
Sbjct: 230 RQIHGFMIKANADSDDYIGVGLVDMYAKNHF--LDDAMKVFDWMSHRDLILWNALISGCS 287
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
D+A ++ +R+ G N+ T VLK+ +++ + + +Q+H K G D H
Sbjct: 288 HGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAH 347
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
VVN L+ Y S L++A +VF+E + + T+MI+ +Q A+ LF +ML +G
Sbjct: 348 VVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG 407
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ L+S+L+ACA E G++VH + R F A G ALV+ Y K G++ A+
Sbjct: 408 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 467
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F S+PER + +W+AMI GLA HGH + AL+LF ++ E I PN IT VL AC HAG
Sbjct: 468 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 527
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D ++ F SMK ++GI+ EHY CM+DLLGR GK+ +A EL+ M ++ + +WGAL
Sbjct: 528 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 587
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L A + H + E+ + +++ LEP G +V+L+N YA +
Sbjct: 588 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASS 628
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 4/325 (1%)
Query: 24 KCKSMHQL-KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP-NHF 81
KC QL Q+HA + + D F A+ L+A G + A R+F+ S N
Sbjct: 18 KCVPDAQLGAQVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFDEAGSERNAV 75
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WN L+ A + AI ++ M +G P + F+ V+ AC+ R+++ +Q+H V
Sbjct: 76 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 135
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+ G + D+ N LV Y ++ A +F+++ + + W +ISG + + A+
Sbjct: 136 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 195
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
L QM G PN L+S+L ACA +G +LG ++H F+ + +G LV MY
Sbjct: 196 ELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 255
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
KN L A +FD M R++ WNA+ISG + G +EA +F L KE + N T
Sbjct: 256 AKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLA 315
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRV 346
VL + RQ+ +++
Sbjct: 316 AVLKSTASLEAASATRQVHALAEKI 340
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 12/392 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+HA ++ +D F A+ L+ G + A+ +F + + WN LI
Sbjct: 129 RQVHAMVVRMGYEKDVFTANALVDM--YVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 186
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + +AI L + M+ +G PN + +LKAC+ + + +QIH + K+ D D +
Sbjct: 187 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 246
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y+ + L++A +VFD + +R L +W +ISG + R +EA +F + EG
Sbjct: 247 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 306
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
N TLA+VL + A +VH + GF A + L+ Y K L+ A
Sbjct: 307 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 366
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +I +MI+ L+ H E A+ LF ++ ++ + P+ +L+AC
Sbjct: 367 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 426
Query: 332 FIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ G+Q+ + KR + + + +V +CG + +A EL + + VV W A
Sbjct: 427 AYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIEDA-ELAFSSLPERGVVSWSA 483
Query: 391 LLAACKNHGN----IEVAERVVKEIIALEPNN 418
++ HG+ +E+ R+V E + PN+
Sbjct: 484 MIGGLAQHGHGKRALELFGRMVDE--GINPNH 513
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 8 LRQPPLPIP-PLSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
LR+ P P LS L + C S+ Q KQ+HA +I + D FA + L+ + G
Sbjct: 404 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY--TYAKCG 461
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+ A F+S+ W+ +I A + +A+ L+ M G PN T T VL
Sbjct: 462 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 521
Query: 124 ACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-NRTL 181
AC++ ++ K+ + + G+D +C++ + L++A ++ + +
Sbjct: 522 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 581
Query: 182 NVWTTMI 188
+VW ++
Sbjct: 582 SVWGALL 588
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 230/401 (57%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH MI ++ D + L+ A + L A ++F+ + + +WN LI +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHF--LDDAMKVFDWMSHRDLILWNALISGCS 380
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
D+A ++ +R+ G N+ T VLK+ +++ + + +Q+H K G D H
Sbjct: 381 HGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAH 440
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
VVN L+ Y S L++A +VF+E + + T+MI+ +Q A+ LF +ML +G
Sbjct: 441 VVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG 500
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ L+S+L+ACA E G++VH + R F A G ALV+ Y K G++ A+
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F S+PER + +W+AMI GLA HGH + AL+LF ++ E I PN IT VL AC HAG
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D ++ F SMK ++GI+ EHY CM+DLLGR GK+ +A EL+ M ++ + +WGAL
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 680
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L A + H + E+ + +++ LEP G +V+L+N YA +
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASS 721
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 171/338 (50%), Gaps = 6/338 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A R+F+ I P H W++L+ A +++ P AI + MR G N+ VLK +
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-RNRTLNVWTT 186
+ Q+H +G D+ V N LV Y +++AR+VFDE R W
Sbjct: 116 AQ---LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 172
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
++S Y ++ + +A+ +F +M+ G +P + V++AC S ++ G +VH V G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 232
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
+E ALV MY K G + A +F+ MP+ ++ +WNA+ISG +GH A++L
Sbjct: 233 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+++ +VPN +L AC AG D+GRQI G M + G +VD+ +
Sbjct: 293 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKN 351
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ +A ++ M + D+++W AL++ C + G + A
Sbjct: 352 HFLDDAMKVFDWMSHR-DLILWNALISGCSHGGRHDEA 388
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 4/325 (1%)
Query: 24 KCKSMHQL-KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP-NHF 81
KC QL Q+HA + + D F A+ L+A G + A R+F+ S N
Sbjct: 111 KCVPDAQLGAQVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFDEAGSERNAV 168
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WN L+ A + AI ++ M +G P + F+ V+ AC+ R+++ +Q+H V
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 228
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+ G + D+ N LV Y ++ A +F+++ + + W +ISG + + A+
Sbjct: 229 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAI 288
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
L QM G PN L+S+L ACA +G +LG ++H F+ + +G LV MY
Sbjct: 289 ELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMY 348
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
KN L A +FD M R++ WNA+ISG + G +EA +F L KE + N T
Sbjct: 349 AKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLA 408
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRV 346
VL + RQ+ +++
Sbjct: 409 AVLKSTASLEAASATRQVHALAEKI 433
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 188/392 (47%), Gaps = 12/392 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+HA ++ +D F A+ L+ G + A+ +F + + WN LI
Sbjct: 222 RQVHAMVVRMGYEKDVFTANALVDM--YVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + +AI L + M+ +G PN + +LKAC+ + + +QIH + K+ D D +
Sbjct: 280 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y+ + L++A +VFD + +R L +W +ISG + R +EA +F + EG
Sbjct: 340 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 399
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
N TLA+VL + A +VH + GF A + L+ Y K L+ A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 459
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +I +MI+ L+ H E A+ LF ++ ++ + P+ +L+AC
Sbjct: 460 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 332 FIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ G+Q+ + KR + + + +V +CG + +A EL + + VV W A
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIEDA-ELAFSSLPERGVVSWSA 576
Query: 391 LLAACKNHGN----IEVAERVVKEIIALEPNN 418
++ HG+ +E+ R+V E + PN+
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDE--GINPNH 606
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 8/266 (3%)
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+H ++ KSG L N L+ YS AR+VFDEI + W+++++ Y+ +
Sbjct: 25 HLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNG 82
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
A+ F M EG N L VL + +LG +VH GF +
Sbjct: 83 LPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFVAN 139
Query: 256 ALVHMYTKNGALAKAKALFDSM-PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
ALV MY G + A+ +FD ERN +WN ++S + +A+ +F ++ I
Sbjct: 140 ALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P + F V++AC + ID GRQ+ + R+ G E + +VD+ + G+V A
Sbjct: 200 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRM-GYEKDVFTANALVDMYVKMGRVDIASV 258
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGN 400
+ ++M DVV W AL++ C +G+
Sbjct: 259 IFEKMP-DSDVVSWNALISGCVLNGH 283
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 8 LRQPPLPIP-PLSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
LR+ P P LS L + C S+ Q KQ+HA +I + D FA + L+ + G
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY--TYAKCG 554
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+ A F+S+ W+ +I A + +A+ L+ M G PN T T VL
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 124 ACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-NRTL 181
AC++ ++ K+ + + G+D +C++ + L++A ++ + +
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674
Query: 182 NVWTTMI 188
+VW ++
Sbjct: 675 SVWGALL 681
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T++ L+ A + L G +H + GF A L L+ Y+K A+ +FD +
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEI 63
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
P+ +W+++++ +++G A+ F + E + N+ VL A +G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---QLGA 120
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
Q+ +M G + +V + G G + +A + + + V W L++A
Sbjct: 121 QVH-AMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVK 179
Query: 398 HGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
+ A +V E++ ++P G V++
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 241/443 (54%), Gaps = 13/443 (2%)
Query: 11 PPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG--DLSYA 68
PP P LS L C S+ L Q+HA + + +RLL C +G L+YA
Sbjct: 22 PPQQHPVLSHLP-HCTSLRTLAQLHAAAVKAGLAAHPALVTRLLTLCTGPDAGPAHLAYA 80
Query: 69 TRLFNSIQSPNHFMW-NTLIRAQASSLNPDK-----AIFLYMNMRRTGFAPNQHTFTFVL 122
++F+ + P +W NTL+R A S NP A+ +++ M G AP+ +TF +L
Sbjct: 81 RQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSLL 140
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC+ R+ +Q H K G +V L+ Y+ D AR +F +
Sbjct: 141 KACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCVV 200
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+ MI+ +S R EAL+LF +M +G +P SVT+ SVLSACA G LELG VH +V
Sbjct: 201 SYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHDYV 260
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ G + TAL+ MY K G+L A +F M ++ W+ MI A+HG+ EA+
Sbjct: 261 RKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAI 320
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
LF +++KE + P+DITF+GVL AC H+G + G Q F MK +GI P I+HYGC+ DL
Sbjct: 321 SLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKD-HGIVPGIKHYGCVTDL 379
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G++ A + I + P ++W LL+AC HG+ E+ +RV + I+ L+ ++ G Y
Sbjct: 380 LARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGDY 439
Query: 423 VVLSNMYAEA---ESMKMQLEIL 442
V+ SN+ A E M M +++
Sbjct: 440 VIFSNLCANTGYWEEMNMVRKLM 462
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/398 (36%), Positives = 228/398 (57%), Gaps = 2/398 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
++H+ ++ + D F L+ + G + A ++F+ I N W I
Sbjct: 129 KMHSLVVKAGCEADAFVKISLINL--YTKCGFIDNAFKVFDDIPDKNFASWTATISGYVG 186
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+AI ++ + G P+ + VL AC L + I +++++G+ ++ V
Sbjct: 187 VGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFV 246
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
LV Y ++ AR VFD + + + W++MI GYA + EAL LF +ML EG
Sbjct: 247 ATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGL 306
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ + VL +CA+ G LELG+ + F ++LGTAL+ MY K G + +A
Sbjct: 307 KPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWE 366
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F M +++ WNA ISGLA GH ++AL LF ++EK I P+ TFVG+L AC HAG
Sbjct: 367 VFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGL 426
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ GR+ F SM+ V+ + P+IEHYGCMVDLLGR G + EA +LIK M + + ++WGALL
Sbjct: 427 VEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALL 486
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
C+ H + ++ E V+K++IALEP + G YV+LSN+YA
Sbjct: 487 GGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYA 524
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 210/377 (55%), Gaps = 4/377 (1%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+ LK IHA ++ +D + +++L F + G+ +Y+ R+ + + PN F++NT+I
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSF--NFGNTNYSFRILDQTKEPNIFLFNTMI 80
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R + ++I +Y +MR+ G +P+ TF FVLKAC+ V ++H+ V K+G +
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCE 140
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D V L+ Y+ ++NA +VFD+I ++ WT ISGY + EA+ +F ++
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L G P+S +L VLSAC ++G L GE + ++ G + TALV Y K G +
Sbjct: 201 LEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNM 260
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A+++FD M E+NI +W++MI G AS+G +EALDLF K+ E + P+ VGVL +C
Sbjct: 261 ERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSC 320
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
G +++G + ++ + ++D+ +CG++ A E+ + M K D V+
Sbjct: 321 ARLGALELGDWASNLINGNEFLDNSVLGTA-LIDMYAKCGRMDRAWEVFRGMR-KKDRVV 378
Query: 388 WGALLAACKNHGNIEVA 404
W A ++ G+++ A
Sbjct: 379 WNAAISGLAMSGHVKDA 395
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 84/219 (38%), Gaps = 43/219 (19%)
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
CL+ + +H + G + L ++ G + + D E NI +N MI
Sbjct: 22 CLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIR 81
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC--------------------CHA 330
GL + +E+++++ + KE + P+ TF VL AC C A
Sbjct: 82 GLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEA 141
Query: 331 ---------------GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
GFID ++F + + + + GK EA ++
Sbjct: 142 DAFVKISLINLYTKCGFIDNAFKVFDDIP-----DKNFASWTATISGYVGVGKCREAIDM 196
Query: 376 IKRMV---WKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+R++ +PD +L+ACK G++ E + + I
Sbjct: 197 FRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYI 235
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 239/411 (58%), Gaps = 10/411 (2%)
Query: 27 SMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSI--QSP-NHFM 82
S+ KQIHA+ + + H A LL A + L YA + + + P + F
Sbjct: 27 SLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDPFP 86
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
NT++R A S P A+ L+ RR P+ HT+ +++AC+ + +L + +H +
Sbjct: 87 LNTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLIQACARLLALREGECLHAEAA 143
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE--IRNRTLNVWTTMISGYAQSFRANEA 200
K+G + V N LV Y +A +VFDE +R R L W +M++ +A + R NE
Sbjct: 144 KNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEV 203
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L +F +ML F P+ T+ SVL+ACA+ G L LG +VHV+V+ G + + AL+ +
Sbjct: 204 LTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDL 263
Query: 261 YTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
Y K G++ A+ +F+ M R + +W ++I GLA++G +EAL+LF +E+E++VP +IT
Sbjct: 264 YAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEIT 323
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
VGVL AC H G +D G + F MK YGI P+IEH GCMVDLLGR G+V EA + I M
Sbjct: 324 MVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITM 383
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+P+ V+W LL +C H +E+ + + ++ L+P + G YV+LSN+YA
Sbjct: 384 PLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYA 434
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 234/400 (58%), Gaps = 2/400 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
LK++H + + D A+ +A + + G LSYA R+F+ I+S WN LI
Sbjct: 398 LKELHCYSLKQEFVYDELLANAFVA--SYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGY 455
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A S +P ++ ++ M+ +G P+ T +L ACS ++SL K++H + ++ L+ DL
Sbjct: 456 AQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 515
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V ++ Y +L + +FD + + +L W T+I+G+ Q+ AL LF QM++
Sbjct: 516 FVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLY 575
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G +P +++ +V AC+ L LG + H + E A + +++ MY KNGA+ ++
Sbjct: 576 GIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQS 635
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F+ + E++ A+WNAMI G HG A+EA+ LF ++++ P+D+TF+GVL+AC H+
Sbjct: 636 SKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHS 695
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + G + MK +G++P ++HY C++D+LGR G++ A + M +PDV +W +
Sbjct: 696 GLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNS 755
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
LL+ C+ H N+E+ E+V ++ LEP YV+LSN+YA
Sbjct: 756 LLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYA 795
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 10/291 (3%)
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C + L K++H + K D + N V Y+ L+ A++VF IR++TLN W
Sbjct: 389 CFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSW 448
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+I GYAQS +L QM G P++ T+ S+LSAC++ L LG++VH F+
Sbjct: 449 NALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIR 508
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
E + +++ +Y G L + LFD+M + ++ +WN +I+G +G E AL L
Sbjct: 509 NWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGL 568
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH---YGC-MV 360
FR++ I P I+ + V AC + +GR+ Y ++ +E C ++
Sbjct: 569 FRQMVLYGIQPCGISMMTVFGACSLLPSLRLGRE-----AHAYALKHLLEDNAFIACSII 623
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
D+ + G + ++ ++ + K W A++ HG + A ++ +E+
Sbjct: 624 DMYAKNGAITQSSKVFNGLKEKS-AASWNAMIMGYGMHGRAKEAIKLFEEM 673
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 189/430 (43%), Gaps = 65/430 (15%)
Query: 13 LPIPPLSLLADKCKSMHQ----LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
LP+P LS+L D +S + ++ I S+ + R+ FC +GDL +
Sbjct: 6 LPLPQLSVLFDYRRSRKESSFPRADYNSNAISSNSTNANHFLRRISNFC---ETGDLDKS 62
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R+ + ++SS +FL + + +L+A
Sbjct: 63 FRVVQEFAGDD----------ESSS-----DVFLLV----------REALGLLLQASGKR 97
Query: 129 RSLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + ++IH VS S L D + ++ Y++ +++R FD +R++ L W +
Sbjct: 98 KDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAV 157
Query: 188 ISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
IS Y+++ +E L +F +M+ + P++ T V+ ACA + +G VH V G
Sbjct: 158 ISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTG 217
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
+G ALV Y +G ++ A LFD MPERN+ +WN+MI + +G
Sbjct: 218 LVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG---------- 267
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+ +P+ T V VL C I VG+ + G ++ ++ ++ ++D+ +
Sbjct: 268 --DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKL-SLDKELVVNNALMDMYSKW 324
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
G ++++ ++I ++ +VV W ++ G+I HG + +L
Sbjct: 325 GCIIDS-QMIFKLNNNKNVVSWNTMVGGFSAEGDI-----------------HGTFDLLR 366
Query: 427 NMYAEAESMK 436
M A +E +K
Sbjct: 367 QMLAGSEDVK 376
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 242/423 (57%), Gaps = 9/423 (2%)
Query: 30 QLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
+LK+IH + IQ D A+ +A + G L YA +F ++S WN LI
Sbjct: 418 KLKEIHGYALRHGFIQSDELVANAFVA--GYAKCGSLHYAEGVFCGMESKMVSSWNALIG 475
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+ P KA+ LY+ MR +G P+ T +L AC+ ++SL+C K+IH + ++G +L
Sbjct: 476 GHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFEL 535
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D + LV Y + A+ FD + + L W TMI+G++Q+ +AL +F QML
Sbjct: 536 DEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQML 595
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
P+ +++ L AC+Q L LG+++H F + + +L+ MY K G +
Sbjct: 596 SSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCME 655
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+++ +FD + + TWN +I+G HGH +A++LF+ ++ P+ +TF+ +L+AC
Sbjct: 656 QSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACN 715
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
HAG + G + G M+ ++GI+PK+EHY C+VD+LGR G++ EA EL+ + KPD +W
Sbjct: 716 HAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIW 775
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLEIL 442
+LL++C+N+ ++++ E+V +++ L P+ YV++SN YA E M+ +++ +
Sbjct: 776 SSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEI 835
Query: 443 LVQ 445
+Q
Sbjct: 836 GLQ 838
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 161/328 (49%), Gaps = 10/328 (3%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGD 64
SS +P I L L + K++ ++IH + S Q D +RL+ + S D
Sbjct: 87 SSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVT---MYSICD 143
Query: 65 LSYATRL-FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVL 122
Y + L FN+ + N F+WN L+ + A+F+++ M T F P+ T V+
Sbjct: 144 SPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVI 203
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC V + + +H K+ + D+ V N L+ Y + +A +VFD++ R L
Sbjct: 204 KACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLV 263
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLM--EGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W +++ ++ E+ LF +L EG P+ T+ +V+ CA+ G + LG H
Sbjct: 264 SWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHG 323
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
G + ++L+ MY+K G L +A+ LFD+ E+N+ +WN+MI G +
Sbjct: 324 LALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRG 382
Query: 301 ALDLFRKLEKEQIVP-NDITFVGVLSAC 327
A +L RK++ E V N++T + VL C
Sbjct: 383 AFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 142/279 (50%), Gaps = 7/279 (2%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
+L+ C +++ ++IH +S S D+ ++ LV YS+ ++ VF+ R
Sbjct: 98 LLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRR 157
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ L +W ++SGY ++ +A+ +F +M+ + F P++ TL V+ AC + LGE
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH F +G AL+ MY K G + A +FD MP+RN+ +WN+++ +G
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 298 AEEALDLFRKL--EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
EE+ LF+ L E ++P+ T V V+ C G + +G +F + G+ +++
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLG-MVFHGLALKLGLCGELKV 336
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++D+ +CG + EA L + +V+ W +++
Sbjct: 337 NSSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGG 373
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 250/435 (57%), Gaps = 14/435 (3%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFC-- 57
+ C SL +P + S + +KC + +LKQ IHA I SS +D LL F
Sbjct: 96 INCGSL-EPERTL--YSKMLNKCTYLRKLKQGRAIHAH-IQSSTFEDDLV---LLNFILN 148
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
+ G L A LF+ + + + W LI + S +A+ L+ M GF PN+ T
Sbjct: 149 MYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFT 208
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ +LKA S + +Q+H K G D+++HV + L+ Y+ + + A+ +F+ +
Sbjct: 209 LSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ + W +I+G+A+ + LF QML +GFEP T +SVL ACA SG LE G+
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKW 327
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH V G + A +G L+ MY K+G++ AK +F + +++I +WN++ISG A HG
Sbjct: 328 VHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGL 387
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EAL LF ++ K ++ PN+ITF+ VL+AC H+G +D G+ F MK+ + IE ++ H+
Sbjct: 388 GAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHV 446
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
+VDLLGR G++ EA + I+ M KP +WGALL AC+ H N+++ ++I L+P+
Sbjct: 447 TVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPH 506
Query: 418 NHGVYVVLSNMYAEA 432
+ G +V+LSN+YA A
Sbjct: 507 DSGPHVLLSNIYASA 521
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 239/432 (55%), Gaps = 19/432 (4%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY---ATRLFNSIQSPNHFMW 83
++H K HA +I+ R +F S L+ +S G A R+F + + W
Sbjct: 336 NVHGGKTFHA--VITKR---NFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSW 390
Query: 84 NTLIRAQASSLNPDKAIFLYMNMR---RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
N ++ + K + LY M+ + F + + +CS + L + H +
Sbjct: 391 NLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCY 450
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR-TLNVWTTMISGYAQSFRANE 199
K LD D V N L+ Y ++A ++F + + + W T+IS YA +N
Sbjct: 451 SIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNA 510
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
A+ L+DQML+EG PNS TL +V+SACA LE GEK+H +VK G++ + TAL+
Sbjct: 511 AMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALID 570
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G L A+ +FDSM + ++ WN MISG HG A++AL+LF K+E I PN +T
Sbjct: 571 MYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVT 630
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+ +LSA CH+G ++ GR++F M + Y +EP ++HY CMVDLLG+ G + EAE+++ M
Sbjct: 631 FLAILSALCHSGLLEEGRKVFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAM 689
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAE 433
+PD +WG LL+ACK H N E+ R+ K+ A +P N G Y+++SN Y E E
Sbjct: 690 PIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIE 749
Query: 434 SMKMQLEILLVQ 445
++ ++ L VQ
Sbjct: 750 KLRETMKNLGVQ 761
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 172/374 (45%), Gaps = 12/374 (3%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG----FAPNQHTF 118
G++ A ++F + + W +I + + + + M R PN T
Sbjct: 164 GNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTM 223
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
L+AC + LN + +H +V K G+ V++ L YS +A +F E+
Sbjct: 224 ESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPE 283
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ + WT++I Y + EA+ LF QM+ G +P+ + ++ VLS +G + G+
Sbjct: 284 KDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTF 343
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + R F ++G AL+ MY K + A +F + +R+ +WN M+ G G
Sbjct: 344 HAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCD 403
Query: 299 EEALDLFRKLE---KEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIE 354
+ L+L+R+++ K + + V +S+C + +GR S+K + + +
Sbjct: 404 VKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVA 463
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-- 412
+ ++ + GRCGK A ++ K DVV W L+++ + G+ A + +++
Sbjct: 464 N--VLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIE 521
Query: 413 ALEPNNHGVYVVLS 426
L PN+ + V+S
Sbjct: 522 GLTPNSTTLITVIS 535
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 18/361 (4%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
+L ++HA + S Q A++L++ A SS+G A F++ P+ F+WN+LIR
Sbjct: 28 ELLRVHALAVTSGLYQRPDLAAKLVS--AYSSAGRPGLAALAFSASPRPDAFLWNSLIRT 85
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL--- 146
+ + A+ + M +G P+ T A + + +L +H + + GL
Sbjct: 86 HHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVG 145
Query: 147 DLD-LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D D + V + LV Y+ ++ +A +VF+E+ R + WT +ISG ++ + E L
Sbjct: 146 DGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLV 205
Query: 206 QML-MEG---FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
+M+ + G PNS T+ S L AC L G +H +V G ++ +AL MY
Sbjct: 206 EMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMY 265
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+K + A ALF +PE+++ +W ++I G EA++LF+++ + + P++I
Sbjct: 266 SKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVS 325
Query: 322 GVLSACCHAGFIDVGRQIFGSM-KRVYGIE-----PKIEHYGC--MVDLLGRCGKVLEAE 373
VLS + G + G+ + KR +G I YG MVD GR ++L
Sbjct: 326 CVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQR 385
Query: 374 E 374
+
Sbjct: 386 D 386
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 12/303 (3%)
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
++H SGL + LV YS + A F +W ++I + +
Sbjct: 31 RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG----A 251
AL +ML G P+ T SA A+ G L +G VH + G +G
Sbjct: 91 DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL----DLFRK 307
+ ++LV+MY + G + A +F+ MPER++ W A+ISG +G + E L ++ R
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRL 210
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ PN T L AC ++ GR + G + +V GI + + +C
Sbjct: 211 AGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKV-GIGDSPMVISALFSMYSKCY 269
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVL 425
+A L + K DVV W +L+ G I A + ++++ L+P+ V VL
Sbjct: 270 STEDACALFLELPEK-DVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVL 328
Query: 426 SNM 428
S +
Sbjct: 329 SGL 331
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 214/357 (59%), Gaps = 16/357 (4%)
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQ 136
P+H + +L+ Q SL + RTG A + H +++ R + +
Sbjct: 87 PSHLLRRSLLGPQLHSL-----------LLRTGHVASDTHVSASLVQLYCTCRHVADARS 135
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+ ++ D+ N ++ Y + DL +AR++FD + R + WTT+I GYAQ R
Sbjct: 136 VFHEMAVR----DVVAWNVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRR 191
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
EA+ +F +M +EG EP+ V L SVLSAC G ++LGE VH FV RG L +
Sbjct: 192 PEEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNS 251
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
++ MY K G + KA +F+ M E+++ TW +I+G A HG +A+++FR++E+E + PN
Sbjct: 252 IIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPN 311
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
D+TF+ +LSAC H G D+GR F M Y I+P++EHYGCMVDLLGR G + EA++L+
Sbjct: 312 DVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLV 371
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
K M K + +WGALLAA + HG+ ++ E + +I LEP+N G Y++LSN++AE E
Sbjct: 372 KDMPLKANAAIWGALLAASRTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQE 428
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 5/253 (1%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
+GDL++A LF+++ N W T+I A P++A+ ++ M+ G P+ V
Sbjct: 158 AGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSV 217
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC ++ +++ + +H V + GL ++ ++N ++ Y + A +VF+ + +++
Sbjct: 218 LSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSV 277
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE-KVHV 240
WTT+I+G+A +A+ +F +M E PN VT ++LSAC+ G +LG ++
Sbjct: 278 VTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNI 337
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHA- 298
V + +V + + G L +A+ L MP + N A W A+++ +HG A
Sbjct: 338 MVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDAD 397
Query: 299 --EEALDLFRKLE 309
EEAL +LE
Sbjct: 398 LGEEALVHLIELE 410
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 212/361 (58%), Gaps = 34/361 (9%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M R G P+ ++F FVLKAC+ + L+ ++IH+ K G+ LD+ V N L+ +S
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGA 60
Query: 166 LNNAR---------------------------------QVFDEIRNRTLNVWTTMISGYA 192
+ AR +VFD I +R WT+MI+GYA
Sbjct: 61 VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYA 120
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
QS EA+ LF +M + GF ++ T+A VLSAC G L G +H++ + EM
Sbjct: 121 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLN 180
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-E 311
AL+ MY+K G + KA +F + + +I +W+A+ISGLA +G +++AL LF ++E
Sbjct: 181 ARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMIS 240
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
I PN+ITF+GVL AC H GF+D G F +M ++Y + P IEHYGCMVDLLGR ++E
Sbjct: 241 DIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVE 300
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
AE+ I+ + +PDVV+W +LL AC+NHGNIE+AE K+I LEP G V+LSN+YA
Sbjct: 301 AEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYAS 360
Query: 432 A 432
A
Sbjct: 361 A 361
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 3/246 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++F+ I N W ++I A S +AI L+ M+ GFA + T VL AC +
Sbjct: 97 ALKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGH 156
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+L + IH + ++ +++DL+ N L+ YS D+ A ++F + + W+ +
Sbjct: 157 WGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAV 216
Query: 188 ISGYAQSFRANEALMLFDQM-LMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKMR 245
ISG A + +++AL LF QM ++ PN +T VL AC G ++ G + ++
Sbjct: 217 ISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIY 276
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDL 304
G +V + + L +A+ ++P + ++ W +++ +HG+ E A
Sbjct: 277 NLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFA 336
Query: 305 FRKLEK 310
+++E+
Sbjct: 337 AKQIEE 342
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 34/178 (19%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTF 118
S GD+ A +F+ + P+ F W+ +I A + DKA+ L+ M + PN+ TF
Sbjct: 190 SKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITF 249
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
VL AC++ +D L+ N + + Y+++ + + + D +
Sbjct: 250 LGVLCACNH---------------GGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGR 294
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
L V A+ F + +P+ V S+L AC G +EL E
Sbjct: 295 ANLLV-------EAEKFIRTLPI-----------QPDVVIWRSLLFACRNHGNIELAE 334
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 235/417 (56%), Gaps = 8/417 (1%)
Query: 21 LADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L +C +++L K IHA ++++SR +D L + GDL YA +LF+ + S
Sbjct: 21 LLKRCTHLNKLNEGKIIHA-LLLNSRFRDDLVMQNTL-LNLYAKCGDLVYARKLFDEMSS 78
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC--K 135
+ W LI + P A+ L M R G PNQ T +LKA S V S + +
Sbjct: 79 RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H + G D +++V ++ Y+ L A+ +FD + ++ W +I+GYA+
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
+ ++A LF ML E +P T +SVL ACA G LE G+ VH + G ++ A +G
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
L+ MY K+G++ AK +FD + +R++ +WN+M++G + HG + AL F ++ + +I P
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP 318
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
NDITF+ VL+AC HAG +D GR F MK+ Y +EP+I HY MVDLLGR G + A +
Sbjct: 319 NDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQF 377
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
I M KP +WGALL AC+ H N+E+ + I L+ + G +V+L N+YA A
Sbjct: 378 ISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALA 434
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
++L C L G+ +H + F ++ L+++Y K G L A+ LFD M R
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV--GRQ 338
++ TW A+I+G + H ++AL L ++ + + PN T +L A G DV GRQ
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ G R YG + + ++D+ RC + EA+ + MV K +V W AL+A
Sbjct: 140 LHGLCLR-YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVS-WNALIAGYARK 197
Query: 399 G 399
G
Sbjct: 198 G 198
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 233/430 (54%), Gaps = 33/430 (7%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H ++ + F + L+ L G L A +F+ + WN +I A
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLLC--GQLDTARGVFDVCPKADVITWNMIISAYN 195
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+++ L++ M P T VL ACS ++ L K++H++V ++ +L
Sbjct: 196 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 255
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT------------------------- 186
+ N ++ Y+ ++++A +F + NR + WTT
Sbjct: 256 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 315
Query: 187 ------MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
MI GY +S R EAL LF M +P+ T+ SVL+ACA G LELGE +
Sbjct: 316 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRT 375
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
++ + + AL+ MY K G + KA+++F M +R+ TW AMI GLA +GH E+
Sbjct: 376 YIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 435
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
ALD+F + K I+P++IT++GVLSAC H G +D GR+ F M +GIEP I HYGC+V
Sbjct: 436 ALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLV 495
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
DLL R G++ EA E+I+ M K + ++WGALLA C+ + ++AE VVK+I+ LEP+N
Sbjct: 496 DLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGA 555
Query: 421 VYVVLSNMYA 430
VYV+L N+YA
Sbjct: 556 VYVLLCNIYA 565
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 212/434 (48%), Gaps = 41/434 (9%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S+L+ P PL L + C+SM QL+Q+H Q I + +R++ FC GD
Sbjct: 9 SALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDF 68
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
YA RLF+ I PN F+WNT+IR + P + LY+ M R G P+++TF F+ K
Sbjct: 69 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 128
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ +L +Q+H HV K GL ++ V LV+ Y + L+ AR VFD + W
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+IS Y + + E+ LF M + P +VTL VLSAC++ L G+KVH +VK
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 248
Query: 246 GFEMGAILGTALVHMY-------------------------------TKNGALAKAKALF 274
E +L A++ MY T G + A+ F
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 308
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
D MPE++ +W AMI G +EAL+LFR ++ + P++ T V VL+AC H G ++
Sbjct: 309 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 368
Query: 335 VGRQIFGSMKRVYGIEPKIEH----YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+G I R Y KI++ ++D+ +CG V +AE + + M + D W A
Sbjct: 369 LGEWI-----RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTA 422
Query: 391 LLAACKNHGNIEVA 404
++ +G+ E A
Sbjct: 423 MIVGLAVNGHGEKA 436
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 222/387 (57%), Gaps = 13/387 (3%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
+S G++ A ++F+ + WN LI +KAI +Y M G P+ T
Sbjct: 126 FASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTM 185
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
++ +C+ + LN K+ + +V +GL + + + N L+ +S D++ AR++FD +
Sbjct: 186 IGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEK 245
Query: 179 RTLN-------------VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
RT+ +W MI G Q+ R+ +AL LF +M +P+ +T+ LSA
Sbjct: 246 RTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSA 305
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C+Q G L++G +H +++ + LGT+LV MY K G +++A +F + RN T+
Sbjct: 306 CSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTY 365
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
A+I GLA HG A A+ F ++ I P++ITF+G+LSACCH G I GR F MK
Sbjct: 366 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 425
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
+ + P+++HY MVDLLGR G + EA++L++ M + D +WGALL C+ HGN+++ E
Sbjct: 426 RFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHGNVKLGE 485
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ K+++ L+P++ G+YV+L MY EA
Sbjct: 486 KAAKKLLELDPSDSGIYVLLDGMYGEA 512
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 239/511 (46%), Gaps = 69/511 (13%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M+I+ + D FA+SRL+AFCALS S L+Y ++ I++PN F WN IR + S NP
Sbjct: 1 MVITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPK 60
Query: 98 KAIFLYMNMRRTGFA---PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
A+ Y M R G P+ T+ + K C+++R + I HV K L+L HV N
Sbjct: 61 DAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHN 120
Query: 155 CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
+ ++ ++ NAR+VFDE R L W +I+GY + +A+ ++ M EG +P
Sbjct: 121 ASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKP 180
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK--- 271
+ VT+ ++S+CA G L G++ + +VK G M L AL+ M++K G + +A+
Sbjct: 181 DDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIF 240
Query: 272 ----------ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
LFD M E+++ WNAMI G +++AL LF++++ P++IT +
Sbjct: 241 DNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMI 300
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA--------- 372
LSAC G +DVG I +++ + + + +VD+ +CG + EA
Sbjct: 301 HCLSACSQLGALDVGIWIHRYIEK-HSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQT 359
Query: 373 --------------------------EELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
E+I + PD + + LL+AC + G I+
Sbjct: 360 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGI-APDEITFIGLLSACCHGGMIQTGRD 418
Query: 407 V---VKEIIALEPN-NHGVYVVLSNMYAEA----------ESMKMQLEILLVQVLFAGLA 452
+K L P H Y ++ ++ A ESM M+ + + L G
Sbjct: 419 YFSQMKSRFNLNPQLKH--YSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCR 476
Query: 453 SAADILQNPDFESPPTNLTPNRSTPFVLLNG 483
++ L P+ S +VLL+G
Sbjct: 477 MHGNVKLGEKAAKKLLELDPSDSGIYVLLDG 507
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 239/409 (58%), Gaps = 11/409 (2%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS--GDLSYATRLFNSIQSP-NHFMW 83
+M + +HA +I +++ + + + CA SSS YA + P + F +
Sbjct: 8 NMKSVYNLHATLIKNAQHDNPLSLRTFILRCANSSSPPDTARYAAAVLLRFPIPGDPFPY 67
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N +IR A P A+ L+ +M RT + TF +LK S+ + +C IHT V K
Sbjct: 68 NAVIRHVALH-APSLALALFSHMHRTNVPFDHFTFPLILK--SSKLNPHC---IHTLVLK 121
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
G +++V N L+ Y S L+ + ++FDE+ R L W+++IS +A+ +EAL L
Sbjct: 122 LGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTL 181
Query: 204 FDQMLMEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
F QM ++ + P+ V + SV+SA + G LELG VH F+ G + LG+AL+ MY
Sbjct: 182 FQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMY 241
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
++ G + ++ +FD MP RN+ TW A+I+GLA HG EAL+ F + + + P+ I F+
Sbjct: 242 SRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFM 301
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL AC H G ++ GR++F SM YGIEP +EHYGCMVDLLGR G VLEA + ++ M
Sbjct: 302 GVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRV 361
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+P+ V+W LL AC NH + +AE+ + I L+P++ G YV+LSN Y
Sbjct: 362 RPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYG 410
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 224/403 (55%), Gaps = 4/403 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH M+ + D F A L+ A G L A ++F+ + + +WN LI +
Sbjct: 326 RQIHGFMVKAVADFDEFVAVGLVDMYA--KHGFLDDARKVFDFMPRRDLILWNALISGCS 383
Query: 92 SSLNPDKAIFLYMNMRRTGFA--PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ + L+ MR+ G N+ T VLK+ ++ ++ +Q+H K GL D
Sbjct: 384 HDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSD 443
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
HV+N L+ Y L+ A +VF E R+ + TTM++ +Q +A+ LF QML
Sbjct: 444 SHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLR 503
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
+G EP+S L+S+L+AC E G++VH + R F G ALV+ Y K G++
Sbjct: 504 KGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIED 563
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A F +PER I +W+AMI GLA HGH + ALDLF ++ E + PN IT VLSAC H
Sbjct: 564 ADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNH 623
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
AG +D ++ F SMK +GI+ EHY CM+D+LGR GK+ +A EL+ M ++ + +WG
Sbjct: 624 AGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWG 683
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
ALL A + H + E+ +++ LEP G +V+L+N YA A
Sbjct: 684 ALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASA 726
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 213/437 (48%), Gaps = 23/437 (5%)
Query: 38 MIISSRIQDHFAASRLLA-----FCALSSSGDLSYATR-LFNSIQSPNHFMWNTLIRAQA 91
+ + + H S LLA L S L A R +F+ I P H W++L+ A +
Sbjct: 20 LFAGAHLHSHLLKSGLLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYS 79
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
++ P A+ + MR G N+ VLK +VR Q+H + L D+
Sbjct: 80 NNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVR---FGAQVHALAVATRLVHDVF 136
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEI----RNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
V N LV Y ++ AR++FDE R W TMIS Y ++ ++ +A+ +F +M
Sbjct: 137 VANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREM 196
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+ G PN + V++AC S LE G +VH V G+E ALV MY+K G +
Sbjct: 197 VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDI 256
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A +F+ MP ++ +WNA ISG +HGH AL+L +++ +VPN T VL AC
Sbjct: 257 EMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKAC 316
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
AG ++GRQI G M + + G +VD+ + G + +A ++ M + D+++
Sbjct: 317 AGAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDDARKVFDFMP-RRDLIL 374
Query: 388 WGALLAACKNHGN----IEVAERVVKEIIALEPNNHGVYVVL-SNMYAEAESMKMQLEIL 442
W AL++ C + G + + R+ KE + L+ N + VL S +EA Q+ L
Sbjct: 375 WNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHAL 434
Query: 443 LVQVLFAGLASAADILQ 459
++ GL S + ++
Sbjct: 435 AEKI---GLLSDSHVIN 448
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 169/351 (48%), Gaps = 9/351 (2%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI----QSPNHFMWNTLIR 88
Q+HA + + + D F A+ L+A G + A R+F+ N WNT+I
Sbjct: 121 QVHALAVATRLVHDVFVANALVA--VYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
A + AI ++ M +G PN+ F+ V+ AC+ R L +Q+H V ++G +
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEK 238
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D+ N LV YS D+ A VF+++ + W ISG + AL L QM
Sbjct: 239 DVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMK 298
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G PN TL+SVL ACA +G LG ++H F+ + + LV MY K+G L
Sbjct: 299 SSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLD 358
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE--QIVPNDITFVGVLSA 326
A+ +FD MP R++ WNA+ISG + G E L LF ++ KE + N T VL +
Sbjct: 359 DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKS 418
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+ I RQ+ +++ G+ ++D +CG++ A ++ K
Sbjct: 419 TASSEAICHTRQVHALAEKI-GLLSDSHVINGLIDSYWKCGQLDYAIKVFK 468
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 129 RSLNCCKQIHTHVSKSGL--DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
RSL +H+H+ KSGL H++ RC S+ AR VFDEI + W++
Sbjct: 18 RSLFAGAHLHSHLLKSGLLAGFSNHLLTLYSRCRLPSA----ARAVFDEIPDPCHVSWSS 73
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
+++ Y+ + +AL+ F M G N L VL CA + G +VH
Sbjct: 74 LVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAPD--VRFGAQVHALAVATR 130
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSM----PERNIATWNAMISGLASHGHAEEAL 302
+ ALV +Y G + +A+ +FD ERN +WN MIS + + +A+
Sbjct: 131 LVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAI 190
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+FR++ PN+ F V++AC + ++ GRQ+ G++ R G E + +VD+
Sbjct: 191 GVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT-GYEKDVFTANALVDM 249
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ G + A + ++M DVV W A ++ C HG+
Sbjct: 250 YSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVTHGH 286
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 18 LSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
LS L + C S+ Q KQ+HA +I D FA + L+ A + G + A F+
Sbjct: 513 LSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVY--AYAKCGSIEDADMAFSG 570
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ W+ +I A + +A+ L+ M G APN T T VL AC++ ++
Sbjct: 571 LPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDA 630
Query: 135 KQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
K+ + ++ G+D C++ + L +A ++ + +
Sbjct: 631 KKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNM 673
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/430 (36%), Positives = 232/430 (53%), Gaps = 12/430 (2%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQL---KQIHAQMIIS---SRIQDHFAASRLLAFCALSSS 62
R P I +++L+ C S+ L KQIHA ++ S S ++ A +++ C
Sbjct: 225 RVRPSRITYMNVLS-ACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC----- 278
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G A +F + + WNT+IR S ++A + M G AP++ T+T VL
Sbjct: 279 GAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+ L K+IH +K GL D+ N L+ YS + + +ARQVFD + R +
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 398
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WTT++ YA + E+ F QML +G + N +T VL AC+ L+ G+++H V
Sbjct: 399 SWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEV 458
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + AL+ MY K G++ A +F+ M R++ TWN +I GL +G EAL
Sbjct: 459 VKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEAL 518
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ ++ E + PN TFV VLSAC ++ GR+ F M + YGI P +HY CMVD+
Sbjct: 519 QRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDI 578
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G + EAE++I + KP MWGALLAAC+ H N+E+ ER + + LEP N G+Y
Sbjct: 579 LARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLY 638
Query: 423 VVLSNMYAEA 432
V LS +YA A
Sbjct: 639 VSLSAIYAAA 648
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 183/369 (49%), Gaps = 4/369 (1%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
K K + KQ+H ++ + + + LL A G ++ A +LF+ + + W
Sbjct: 40 KAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA--HCGSVNEARQLFDKFSNKSVVSW 97
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N +I A +A L+ M++ P++ TF +L ACS+ LN ++IH V +
Sbjct: 98 NVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVME 157
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+GL D V N L+ Y+ + +AR+VFD + +R WTT+ YA+S E+L
Sbjct: 158 AGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKT 217
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
+ ML E P+ +T +VLSAC LE G+++H + + + TAL MY K
Sbjct: 218 YHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMK 277
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
GA A+ +F+ + R++ WN MI G G EEA F ++ +E + P+ T+ V
Sbjct: 278 CGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTV 337
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC G + G++I + G+ + ++++ + G + +A ++ RM K
Sbjct: 338 LSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KR 395
Query: 384 DVVMWGALL 392
DVV W LL
Sbjct: 396 DVVSWTTLL 404
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 200/397 (50%), Gaps = 6/397 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
++IH +++ + D + L++ A G + A R+F+++ S + W TL A A
Sbjct: 149 REIHVRVMEAGLANDTTVGNALISMYA--KCGSVRDARRVFDAMASRDEVSWTTLTGAYA 206
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S ++++ Y M + P++ T+ VL AC ++ +L KQIH H+ +S D+
Sbjct: 207 ESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVR 266
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V L + Y +AR+VF+ + R + W TMI G+ S + EA F +ML EG
Sbjct: 267 VSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEG 326
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+ T +VLSACA+ G L G+++H G G AL++MY+K G++ A+
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDAR 386
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD MP+R++ +W ++ A E+ F+++ ++ + N IT++ VL AC +
Sbjct: 387 QVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ G++I + + G+ + ++ + +CG V +A + + M + DVV W L
Sbjct: 447 ALKWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNTL 504
Query: 392 LAACKNHGN-IEVAERV-VKEIIALEPNNHGVYVVLS 426
+ +G +E +R V + + PN VLS
Sbjct: 505 IGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLS 541
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 173/326 (53%), Gaps = 10/326 (3%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
+ R G + + + +L++C + L KQ+H H+ + G+ ++++ N L++ Y+
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+N ARQ+FD+ N+++ W MISGYA A EA LF M E EP+ T S+LSA
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C+ L G ++HV V G +G AL+ MY K G++ A+ +FD+M R+ +W
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-K 344
+ A G+ EE+L + + +E++ P+ IT++ VLSAC ++ G+QI + +
Sbjct: 199 TTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVE 258
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
Y + ++ + + +CG +A E+ + + ++ DV+ W ++ + G +E A
Sbjct: 259 SEYHSDVRVS--TALTKMYMKCGAFKDAREVFECLSYR-DVIAWNTMIRGFVDSGQLEEA 315
Query: 405 ----ERVVKEIIALEPNNHGVYVVLS 426
R+++E +A P+ VLS
Sbjct: 316 HGTFHRMLEEGVA--PDRATYTTVLS 339
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 242/434 (55%), Gaps = 21/434 (4%)
Query: 5 CSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRI--QDHFAASRLLAFCALSSS 62
C +L + LP P S+ KQIHA+ + ++ + A LL A +
Sbjct: 18 CVALLRLHLPSP----------SVAAAKQIHARALRAAGVPLSHPLLAKHLLFHLASLRA 67
Query: 63 GD--LSYATRLFNSI-QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
G L YA + + + P+ F NT++R ASS +P A+ L+ RR P+ HT+
Sbjct: 68 GPPPLLYAVTVLSCLLPDPDPFSLNTVLRIAASSAHPRIALALH---RRRLAPPDTHTYP 124
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-- 177
+L+AC+ + +L + +H +K+GL + V N LV Y +A +VFDEI
Sbjct: 125 PLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVL 184
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R L W ++++G+A + R NE L +F + L P+ T+ SVL+ACA+ G L LG +
Sbjct: 185 ERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRR 244
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHG 296
VHVF G + +G AL+ +Y K G + A +F+ M R + +W ++I GLA +G
Sbjct: 245 VHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNG 304
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
++AL+LF +E+E+++P DIT VGVL AC H G +D G + F M+ YGI P IEH
Sbjct: 305 FGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHL 364
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GCMVDLLGR G+V EA I M +P+ V+W LL AC H +E+ E ++ L+P
Sbjct: 365 GCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDP 424
Query: 417 NNHGVYVVLSNMYA 430
+ G YV+LSN+YA
Sbjct: 425 GHSGDYVLLSNLYA 438
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 226/404 (55%), Gaps = 31/404 (7%)
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
+ G ++ A R+F+ I WN++I + ++A+ ++ M+ G P+ T
Sbjct: 181 ACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVG 240
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+L + + + + +H H+ +G+++D V N L+ Y+ +L A+ VFD++ ++
Sbjct: 241 LLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKD 300
Query: 181 LNVWTTMISGYA-------------------------------QSFRANEALMLFDQMLM 209
+ WT MI+ YA Q EA+ LF +M
Sbjct: 301 VVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCD 360
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
G N TL ++LS+C+ G L LG++ H ++ + A L A++ MY K GAL
Sbjct: 361 SGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQT 420
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A +F MPE+N +WN +I LA HG+ +EA+++F K++ + P++ITF G+LSAC H
Sbjct: 421 AMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSH 480
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+G +D G+ F M +GI P +EHY CMVDLLGR G + EA LIK+M KPDVV+W
Sbjct: 481 SGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWS 540
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
ALL AC+ +GN+ + ++++K+++ L N G+YV+LSNMY+E++
Sbjct: 541 ALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQ 584
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 225/433 (51%), Gaps = 55/433 (12%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG----DLSYATRLFN 73
L L D+C S+ QLK +HAQ+I+ H A+++L L SS DL YA +LF+
Sbjct: 39 LHYLIDQCISLKQLKHVHAQIIL------HGLATQVLTLGKLVSSSVQLRDLRYAHKLFD 92
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS--NVRSL 131
I PN FM+N LI+ ++S +P K++ LY M G PNQ T FVLKAC+ + L
Sbjct: 93 QIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWL 152
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
C +H K G+ V N ++ Y + +AR+VFD+I RTL W +MI+GY
Sbjct: 153 GVC--VHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGY 210
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
++ R+ EA+++F +M G EP+ TL +LS + G +LG VH+ + + G E+ +
Sbjct: 211 SKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDS 270
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG--------------- 296
I+ AL+ MY K G L AK++FD M ++++ +W MI+ A+HG
Sbjct: 271 IVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGK 330
Query: 297 -----------HAE-----EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
H + EA+DLF ++ ++ ND T V +LS+C H G + +G+Q
Sbjct: 331 NVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQ-- 388
Query: 341 GSMKRVYGIEPKIEHYGC--MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ ++ + C ++D+ +CG + A ++ M K + V W ++ A H
Sbjct: 389 -AHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEK-NAVSWNVIIGALALH 446
Query: 399 G----NIEVAERV 407
G IE+ E++
Sbjct: 447 GYGKEAIEMFEKM 459
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 12/289 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC ++ K + QM+ D S A ++ G + A FN + N W
Sbjct: 282 KCGNLKCAKSVFDQML------DKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSW 335
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N++I +A+ L+ M +G N T +L +CS++ L KQ H+++
Sbjct: 336 NSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFD 395
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+ + L + N ++ Y+ L A VF + + W +I A EA+ +
Sbjct: 396 NNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEM 455
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAILGTALVHM 260
F++M G P+ +T +LSAC+ SG ++ G+ H F M G +V +
Sbjct: 456 FEKMQASGVCPDEITFTGLLSACSHSGLVDTGQ--HYFEIMNLTFGISPDVEHYACMVDL 513
Query: 261 YTKNGALAKAKALFDSMPER-NIATWNAMISGLASHGHAEEALDLFRKL 308
+ G L +A +L MP + ++ W+A++ ++G+ + ++L
Sbjct: 514 LGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQL 562
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 244/448 (54%), Gaps = 34/448 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
PPL + S ++ +HA ++ ++ A+ L+ A ++ GD + A L +
Sbjct: 47 PPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVT--AYAAGGDGAAARALLSER 104
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN-VRSLNCC 134
+ +WN LI +A +++M R G AP T+ VL AC +
Sbjct: 105 ERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLG 164
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT-------- 186
Q+H V SG+ DL V N LV Y+ +D+ +A ++FD ++ R++ WT+
Sbjct: 165 MQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRL 224
Query: 187 -----------------------MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
MI GY Q+ R EAL +F +M + T+ SV+
Sbjct: 225 GRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVI 284
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
+ACAQ G LE+GE V V++ +G +M A +G AL+ MY+K G++ +A +F M R+
Sbjct: 285 TACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKF 344
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
TW A+I GLA +G+ EEA+++F ++ P+++TF+GVL+AC HAG +D GR+ F SM
Sbjct: 345 TWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSM 404
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ Y I P + HYGC++DL GR GK+ EA + I +M P+ +WG LLAAC+ HGN E+
Sbjct: 405 RETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEI 464
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAE 431
E V + ++ ++P N VY +LSN+YA+
Sbjct: 465 GELVTERLLQMDPENSTVYTLLSNIYAK 492
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 156/350 (44%), Gaps = 34/350 (9%)
Query: 97 DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
+ A+ Y M G P+ +TF +LKA + S + +H HV K G+ + HV L
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
V Y+ D AR + E T VW +ISG+ + R EA F M G P
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 217 VTLASVLSACAQ-SGCLELGEKVHVFVKMRGFEMGAILGTALVHMY-------------- 261
VT SVLSAC + +G + LG +VH V G + ALV MY
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFD 204
Query: 262 -----------------TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
T+ G + +A+ LF MPER+ +W AMI G EAL++
Sbjct: 205 GMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEM 264
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
FR+++ + ++ T V V++AC G +++G + M R GI+ ++D+
Sbjct: 265 FREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSR-QGIKMDAFVGNALIDMYS 323
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
+CG + A ++ K M + D W A++ +G E A + +I +
Sbjct: 324 KCGSIERALDVFKDMHHR-DKFTWTAIILGLAVNGYGEEAIEMFHRMIGV 372
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 237/418 (56%), Gaps = 5/418 (1%)
Query: 18 LSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFN 73
LS + C +M L +Q+H+Q I D L+ + S G + A ++F+
Sbjct: 274 LSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFD 333
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
I N F W +I D+ A+ L+ M T PN TF+ LKAC+N+ +L
Sbjct: 334 QILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALR 393
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+Q+ TH K G V N L+ Y+ S +++AR+ FD + + L + T+I YA
Sbjct: 394 IGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
++ + EAL LF+++ +G ++ T AS+LS A G + GE++H V G ++
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+ AL+ MY++ G + A +F+ M +RN+ +W ++I+G A HG A +AL+LF K+ +E
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ PN++T++ VLSAC H G ++ G + F SM +G+ P++EHY C+VD+LGR G + EA
Sbjct: 574 VRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEA 633
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ I M +K D ++W L AC+ HGN+E+ + K II EP++ Y++LSN+YA
Sbjct: 634 IQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYA 691
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 199/407 (48%), Gaps = 22/407 (5%)
Query: 19 SLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
SL KC +S +H ++ S D + L++ S G AT +F +
Sbjct: 70 SLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISL--YSKCGQWEKATSIFRLM 127
Query: 76 QSPNHFM-WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
S + W+ ++ A++ +A+ +++M G+ PN++ F +ACS ++
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 135 KQIHTHVSKSG-LDLDLHVVNCLVRCY-SVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
I V K+G L D+ V L+ + DL +A +VF+++ R WT MI+
Sbjct: 188 DSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
Q A EA+ LF M+ G+EP+ TL+ V+SACA L LG+++H G +
Sbjct: 248 QFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC 307
Query: 253 LGTALVHMYTK---NGALAKAKALFDSMPERNIATWNAMISGLASH-GHAEEALDLFRKL 308
+G L++MY K +G++ A+ +FD + + N+ +W AMI+G G+ EEALDLFR +
Sbjct: 308 VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC----MVDLLG 364
++PN TF L AC + + +G Q+F + ++ C ++ +
Sbjct: 368 ILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYA 422
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
R G++ +A + ++++ +++ + ++ A + N E A + EI
Sbjct: 423 RSGRIDDARKAFD-ILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 150/311 (48%), Gaps = 8/311 (2%)
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
KAI +M G P+ T++ LK C RS + +H +++S L LD +N L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 158 RCYSVSSDLNNARQVFDEI-RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
YS A +F + +R L W+ M+S +A + AL+ F M+ G+ PN
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMGAILGTALVHMYTK-NGALAKAKALF 274
A+ AC+ + + +G+ + FV G+ + +G L+ M+ K G L A +F
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
+ MPERN TW MI+ L G+A EA+DLF + P+ T GV+SAC + +
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLL 288
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC---GKVLEAEELIKRMVWKPDVVMWGAL 391
+G+Q+ R +G+ C++++ +C G + A ++ +++ +V W A+
Sbjct: 289 LGQQLHSQAIR-HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL-DHNVFSWTAM 346
Query: 392 LAACKNHGNIE 402
+ G +
Sbjct: 347 ITGYVQKGGYD 357
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 244/448 (54%), Gaps = 33/448 (7%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P+ K ++ + ++H + + D F + + A S G ++YA +F+ +
Sbjct: 116 PILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYA--SCGRINYARNVFDEMS 173
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+ WNT+I D+A L+ M+ + P++ ++ AC ++ +
Sbjct: 174 HRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRA 233
Query: 137 IHTHVSKSGLDLDLHVVNCLVR------C-------------------------YSVSSD 165
I+ + ++ + +D H++ LV C YS
Sbjct: 234 IYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGR 293
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L++A+ +FD+ + L WTTMIS Y +S EAL +F++M G +P+ V++ SV+SA
Sbjct: 294 LDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISA 353
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CA G L+ + VH + + G E + AL++MY K G L + +F+ MP RN+ +W
Sbjct: 354 CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSW 413
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
++MI+ L+ HG A +AL LF ++++E + PN++TFVGVL C H+G ++ G++IF SM
Sbjct: 414 SSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
Y I PK+EHYGCMVDL GR + EA E+I+ M +VV+WG+L++AC+ HG +E+ +
Sbjct: 474 EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGK 533
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEAE 433
K I+ LEP++ G V++SN+YA +
Sbjct: 534 FAAKRILELEPDHDGALVLMSNIYAREQ 561
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 200/424 (47%), Gaps = 39/424 (9%)
Query: 11 PPLPIPPLSLLADK---CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
PP+ + + +K CKS++ +KQ+HA ++ + + +H S L SSS +LSY
Sbjct: 5 PPIASTAANTILEKLSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSY 62
Query: 68 ATRLFNSIQSP-NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
A +F+SI SP ++N +R + S P I Y +R G +Q +F +LKA S
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
V +L ++H K D V + Y+ +N AR VFDE+ +R + W T
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MI Y + +EA LF++M P+ + L +++SAC ++G + ++ F+
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 247 FEMGAILGTALVHM-------------------------------YTKNGALAKAKALFD 275
M L TALV M Y+K G L A+ +FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
++++ W MIS + +EAL +F ++ I P+ ++ V+SAC + G +D
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
+ + + V G+E ++ ++++ +CG + ++ ++M + +VV W +++ A
Sbjct: 363 AKWVHSCI-HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINAL 420
Query: 396 KNHG 399
HG
Sbjct: 421 SMHG 424
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 227/374 (60%), Gaps = 2/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S SGD+ A RLF+S+ WN++I A +A+ L+ M R G +PN T T
Sbjct: 155 SRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITIT 214
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V C+ L ++ VS+ L ++ V L+ Y ++ AR+ FD + R
Sbjct: 215 TVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRAIDEARREFDRMPRR 273
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W+TMI+GY+ + R +E+L LF++M +PN VTL VLSACAQ G ELGE++
Sbjct: 274 DVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIG 333
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+++ + + + LG+AL+ MYTK G +A+A+ +F M ++ + WN+MI GLA +G AE
Sbjct: 334 SYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAE 393
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGC 358
+A+ L+ ++ + + PN+ITF+ +L+AC HAG +D G F MK+ P++EH C
Sbjct: 394 DAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCAC 453
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
+VDLL + G++ EA + I M +P+ V+W LL+AC+ H ++E+A+ +++ LEPN+
Sbjct: 454 IVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNS 513
Query: 419 HGVYVVLSNMYAEA 432
+YV+LSN+YA+A
Sbjct: 514 SSIYVLLSNIYADA 527
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 188/394 (47%), Gaps = 38/394 (9%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
LS + A LF+++ P + + + + I ++ R G A
Sbjct: 22 LSDASTYRAARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCI 81
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV-------------------------- 152
VLK+C+ + Q H H G+ D+ V
Sbjct: 82 PLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPI 141
Query: 153 -----VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+NCL+ YS S D+ AR++FD + +T W +MI+ YA EAL LFDQM
Sbjct: 142 KDPIPMNCLITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQM 201
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L EG PN++T+ +V S CA++G LE G + +V + I+ TAL+ MY K A+
Sbjct: 202 LREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRAI 260
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A+ FD MP R++ W+ MI+G + +G E+L+LF +++ PN++T VGVLSAC
Sbjct: 261 DEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSAC 320
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
G ++G QI GS + P + G ++D+ +CG V A ++ RM K V+
Sbjct: 321 AQLGSDELGEQI-GSYIESQTL-PLTSYLGSALIDMYTKCGHVARARDVFHRMEQKV-VI 377
Query: 387 MWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
W +++ +G E A + E++ ++PN
Sbjct: 378 AWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNE 411
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 242/456 (53%), Gaps = 63/456 (13%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
MI+ + A L+ +++ SG ++YA +LF I P+ FMWNT+IR A S +P
Sbjct: 1 MIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPL 60
Query: 98 KAIFLYMNMR------------------------RTGFAPNQHTFTFVLKACSNVRSL-- 131
AI LY M + GF + F ++ + VR+
Sbjct: 61 NAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLI 120
Query: 132 ----NC----------------------------CKQIHTHVSKSGLD----LDLHVVNC 155
NC ++ V++ D DL N
Sbjct: 121 YFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNV 180
Query: 156 LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
++ Y+ ++ +AR++FDE+ R + W MI+GY +AL +F++M G P+
Sbjct: 181 MITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPD 240
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMGAILGTALVHMYTKNGALAKAKALF 274
VT+ S+LSAC G L+ G+++H + GF ++ +LG AL+ MY K G++ +A +F
Sbjct: 241 EVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVF 300
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
M E++++TWN+++ GLA HGHAE+++ LF ++ K +I P++ITFVGVL AC HAG ++
Sbjct: 301 QGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVE 360
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
GRQ F M+ Y IEP I HYGCMVDLLGR G + EA + I M +P+ ++W LL A
Sbjct: 361 EGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGA 420
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
C+ HGN+E+ R +++ + + G YV+LSN+YA
Sbjct: 421 CRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYA 456
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/366 (41%), Positives = 217/366 (59%), Gaps = 5/366 (1%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L A LF+ + N W T+I A +++ D+A+ L M R G PN TF+ VL+A
Sbjct: 336 LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRA 395
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C + L KQ+H+ + K GL+ D+ V + L+ YS +L A +VF E+ VW
Sbjct: 396 CERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVW 452
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
++I+ +AQ +EAL L+ M GF + TL SVL AC LELG + HV V
Sbjct: 453 NSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHV-- 510
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
F+ IL AL+ MY K G+L AK +F+ M ++++ +W+ MI+GLA +G + EAL+L
Sbjct: 511 LKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNL 570
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F ++ + PN IT +GVL AC HAG ++ G F SM +YGI+P EHYGCM+DLLG
Sbjct: 571 FESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLG 630
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R K+ + +LI M +PDVV W LL AC+ N+++A KEI+ L+P + G YV+
Sbjct: 631 RAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVL 690
Query: 425 LSNMYA 430
LSN+YA
Sbjct: 691 LSNIYA 696
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 147/295 (49%), Gaps = 7/295 (2%)
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
+M R G + T++ ++K C ++ K++H H+ +G + N L+ Y +
Sbjct: 275 SMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFN 334
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
L A+ +FD++ R + WTTMIS Y+ + + A+ L M +G PN T +SVL
Sbjct: 335 LLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLR 394
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC + L +++H ++ G E + +AL+ +Y+K G L +A +F M +
Sbjct: 395 ACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVV 451
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN++I+ A H +EAL L++ + + + T VL AC +++GRQ +
Sbjct: 452 WNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ---AHV 508
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
V + + ++D+ +CG + +A+ + RM K DV+ W ++A +G
Sbjct: 509 HVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMA-KKDVISWSTMIAGLAQNG 562
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C+ ++ LKQ+H+ ++ D F S L+ S G+L A ++F + + + +WN
Sbjct: 396 CERLYDLKQLHSWIMKVGLESDVFVRSALID--VYSKMGELLEALKVFREMMTGDSVVWN 453
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
++I A A + D+A+ LY +MRR GF +Q T T VL+AC+++ L +Q H HV K
Sbjct: 454 SIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK- 512
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
D DL + N L+ Y L +A+ +F+ + + + W+TMI+G AQ+ + EAL LF
Sbjct: 513 -FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLF 571
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ M ++G +PN +T+ VL AC+ +G + G
Sbjct: 572 ESMKVQGPKPNHITILGVLFACSHAGLVNEG 602
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 112/212 (52%), Gaps = 5/212 (2%)
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
A+ + D M G +S+T + ++ C G + G++VH + G+ L L++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K L +A+ LFD MPERN+ +W MIS ++ + A+ L + ++ ++PN T
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F VL AC D+ +Q+ + +V G+E + ++D+ + G++LEA ++ + M
Sbjct: 389 FSSVLRAC--ERLYDL-KQLHSWIMKV-GLESDVFVRSALIDVYSKMGELLEALKVFREM 444
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ D V+W +++AA H + + A + K +
Sbjct: 445 M-TGDSVVWNSIIAAFAQHSDGDEALHLYKSM 475
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 5/370 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY--MNMRRT-GFAPNQHTFTFVLKA 124
A R+F + + WN +I + K + LY M R T F + ++ + +
Sbjct: 374 AGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISS 433
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR-TLNV 183
CS + L + H + K LD D V N L+ Y ++A ++F + + +
Sbjct: 434 CSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVT 493
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W T+IS YA +N A+ L+DQML EG PNS TL +V+SACA LE GEK+H +VK
Sbjct: 494 WNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVK 553
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
G++ + TAL+ MY K G L A+ +FDSM + ++ WN MISG HG A++AL+
Sbjct: 554 EMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALE 613
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF K+E I PN +TF+ +LSACCH+G ++ GRQ+F M + Y +EP ++HY CMVDLL
Sbjct: 614 LFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGK-YSLEPNLKHYACMVDLL 672
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
G+ G + EAE+++ M +PD +WG LL+ACK H + E+ R+ K+ A + N G Y+
Sbjct: 673 GKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYI 732
Query: 424 VLSNMYAEAE 433
++SN Y A+
Sbjct: 733 LISNSYGSAK 742
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 169/372 (45%), Gaps = 18/372 (4%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR---TGFA-PNQHTFTFVLK 123
A +LF ++ + W ++ + + + M R G A PN T L+
Sbjct: 168 AVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLE 227
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
AC + LN + +H + K G+ V++ L YS +A +F E+ + +
Sbjct: 228 ACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVS 287
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
WT++I Y EA+ LF +M+ G +P+ V ++ +LS SG + G+ H +
Sbjct: 288 WTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIM 347
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
R F ++G AL+ MY K + A +F + +R+ +WN MI G G + L+
Sbjct: 348 KRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLE 407
Query: 304 LFRKL---EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
L+R++ + + + + + V +S+C + +GR Y I+ ++ +
Sbjct: 408 LYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRS-----AHCYSIKHWLDEDSSVA 462
Query: 361 DLL----GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--AL 414
++L GRCGK A ++ K DVV W L+++ + G+ A + +++ L
Sbjct: 463 NVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGL 522
Query: 415 EPNNHGVYVVLS 426
PN+ + V+S
Sbjct: 523 TPNSTTLITVIS 534
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 168/365 (46%), Gaps = 8/365 (2%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF + + W +LI +A+ L+ M +G P+ + +L N
Sbjct: 273 ACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGN 332
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+++ K H + K ++ V N L+ Y ++NA +VF + R + W M
Sbjct: 333 SGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLM 392
Query: 188 ISGYAQSFRANEALMLFDQMLMEG---FEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
I GY ++ + L L+ +M F ++ +L S +S+C++ L LG H +
Sbjct: 393 IVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIK 452
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFD-SMPERNIATWNAMISGLASHGHAEEALD 303
+ + + L+ MY + G A +F + + ++ TWN +IS A GH+ A+
Sbjct: 453 HWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVS 512
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
L+ ++ E + PN T + V+SAC + ++ G +I +K + G + + ++D+
Sbjct: 513 LYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEM-GWDYDVSINTALIDMY 571
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGV 421
+CG++ A + M+ + DVV W +++ HG + A + ++ +++PN
Sbjct: 572 AKCGQLGTARRIFDSML-QHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTF 630
Query: 422 YVVLS 426
+LS
Sbjct: 631 LAILS 635
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 166/352 (47%), Gaps = 16/352 (4%)
Query: 11 PPLPIPPLSLLAD-----KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
PP P+++L+ + +L ++HA + S Q ++L++ A SS+G
Sbjct: 3 PPQAATPIAVLSRFLSSPSPSPVPELLRVHALAVTSGLSQRPDIVAKLVS--AYSSAGRP 60
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A F++ P+ F+WN+LIR + + A+ + M + P+ T A
Sbjct: 61 GLAALAFSACPRPDAFLWNSLIRTHHCASDFVAALNAHRRMLASSARPSPFTVPLAASAA 120
Query: 126 SNVRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
+ + +L +H + + GL + V + LV Y+ + +A ++F+E+R R +
Sbjct: 121 AELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDV 180
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFE----PNSVTLASVLSACAQSGCLELGEK 237
WT ++SG ++ + L +M+ + PNS T+ S L AC L G
Sbjct: 181 VAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRC 240
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H + G ++ +AL MY+K + A +LF +PE+++ +W ++I G
Sbjct: 241 LHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGL 300
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYG 348
EA++LF+++ + + P+D+ +LS ++G + G+ MKR +G
Sbjct: 301 IREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFG 352
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 14/304 (4%)
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
++H SGL +V LV YS + A F +W ++I + +
Sbjct: 30 RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF---EMGAI 252
AL +ML P+ T+ SA A+ G L +G VH + G + G++
Sbjct: 90 DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149
Query: 253 -LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL----DLFRK 307
+ ++LV+MY + G + A LF+ M ER++ W A++SG +G + L ++ R
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV-YGIEPKIEHYGCMVDLLGRC 366
+ PN T L AC ++ GR + G +V G P + + + +C
Sbjct: 210 AGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMV--ISALFSMYSKC 267
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVV 424
+A L + K DVV W +L+ G I A + +E++ L+P++ V +
Sbjct: 268 HSTEDACSLFPELPEK-DVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCL 326
Query: 425 LSNM 428
LS +
Sbjct: 327 LSGL 330
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 258/481 (53%), Gaps = 40/481 (8%)
Query: 5 CSSLRQPPLP------IPPLSLLADKCKSMHQ-LKQIHAQMIISSRIQDHFAASRLLAFC 57
C+ LR+ LP +P L A +C+ + HA + + + D F + L
Sbjct: 136 CACLRRAGLPAPGPRALPALLRSAARCEGAGAYVAATHALAVRTGALDDGFVGTALAG-- 193
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A ++ G + ++F+ + + W ++ + + N +A+ L+ M+ +G P+Q
Sbjct: 194 AYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLI 253
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI- 176
VL AC ++R L K IH+++ S + + H+ + L+ Y+ +++ A ++++E+
Sbjct: 254 LATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMP 313
Query: 177 ---------------RNRTLNV---------------WTTMISGYAQSFRANEALMLFDQ 206
RNR + + W+ MISGY S + NEAL LF+
Sbjct: 314 RKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNG 373
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M G + +T+ SV+SACA G L+ + +H F+K G + AL+ M+ K G
Sbjct: 374 MQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGG 433
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A +F+ MP +N+ TW +MIS A HG + +L LF +++ E PN++TF+ +L A
Sbjct: 434 INLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYA 493
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCHAG + GR +F SM + YGIEPK EHYGCMVDLLGR + EA LI+ M +P+V
Sbjct: 494 CCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVP 553
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQV 446
+WG+LLAAC HG++++ K+I+ L+PN+ G V+L +Y +++++ E+ V
Sbjct: 554 IWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMK 613
Query: 447 L 447
L
Sbjct: 614 L 614
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 227/374 (60%), Gaps = 2/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S SGD+ A RLF+S+ WN++I A +A+ L+ M R G +PN T T
Sbjct: 155 SRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNAITIT 214
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V C+ L ++ VS+ L ++ V L+ Y ++ AR+ FD + R
Sbjct: 215 TVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRAIDEARREFDRMPRR 273
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W+TMI+GY+ + R +E+L LF++M +PN VTL VLSACAQ G ELGE++
Sbjct: 274 DVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIG 333
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+++ + + + LG+AL+ MYTK G +A+A+ +F M ++ + WN+MI GLA +G AE
Sbjct: 334 SYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAE 393
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGC 358
+A+ L+ ++ + + PN+ITF+ +L+AC HAG +D G F MK+ P++EH C
Sbjct: 394 DAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCAC 453
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
+VDLL + G++ EA + I M +P+ V+W LL+AC+ H ++E+A+ +++ LEPN+
Sbjct: 454 IVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNS 513
Query: 419 HGVYVVLSNMYAEA 432
+YV+LSN+YA+A
Sbjct: 514 SSIYVLLSNIYADA 527
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 188/394 (47%), Gaps = 38/394 (9%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
LS + A LF+++ P + + + + I ++ R G A
Sbjct: 22 LSDASTYRAARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCI 81
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV-------------------------- 152
VLK+C+ + Q H H G+ D+ V
Sbjct: 82 PLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPI 141
Query: 153 -----VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+NCL+ YS S D+ AR++FD + +T W +MI+ YA EAL LFDQM
Sbjct: 142 KDPIPMNCLIIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQM 201
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L EG PN++T+ +V S CA++G LE G + +V + I+ TAL+ MY K A+
Sbjct: 202 LREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRAI 260
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A+ FD MP R++ W+ MI+G + +G E+L+LF +++ PN++T VGVLSAC
Sbjct: 261 DEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSAC 320
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
G ++G QI GS + P + G ++D+ +CG V A ++ RM K V+
Sbjct: 321 AQLGSDELGEQI-GSYIESQTL-PLTSYLGSALIDMYTKCGHVARARDVFHRMEQKV-VI 377
Query: 387 MWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
W +++ +G E A + E++ ++PN
Sbjct: 378 AWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNE 411
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 238/438 (54%), Gaps = 29/438 (6%)
Query: 24 KCKSMHQLKQIHAQ--------MIISSRIQDHFAASRLLA-------------FCALS-- 60
K +++ + KQ+HA + IS+R+ D +A L C+ +
Sbjct: 131 KQRALKEGKQVHAHIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIM 190
Query: 61 -----SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-N 114
G+ A LF+ + + ++F W +I P++A+ LY M++ ++ N
Sbjct: 191 ISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSN 250
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T + L A + + SL+ K+IH H+ + GLD D V L+ Y + AR +FD
Sbjct: 251 KCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFD 310
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
++ R + WTTMI Y ++ R E LF ++ PN T A VL+ACA +L
Sbjct: 311 KMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDL 370
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G+++H ++ GF+ + +ALVHMY+K G + AK++F+ +P+ ++ +W +++ G A
Sbjct: 371 GKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQ 430
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG ++AL F L K P+ I F+GVLSAC HAG +D G + F S+K +G+ I+
Sbjct: 431 HGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTID 490
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HY C++DLL R G+ EAE +I M KPD +W ALL C+ HGN+E+A+R K + +
Sbjct: 491 HYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEI 550
Query: 415 EPNNHGVYVVLSNMYAEA 432
EP N YV L+N+YA A
Sbjct: 551 EPENPATYVTLANIYASA 568
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 157/330 (47%), Gaps = 47/330 (14%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P + +LK C R+L KQ+H H+ SG + L++ N L+ Y+ L +A +V
Sbjct: 117 PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKV 175
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN--SVTLASVLSACAQ-- 228
FDE+ +R L W MISGY + +A LFD+M PN + + +++S C Q
Sbjct: 176 FDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM------PNRDNFSWTAIISGCVQHN 229
Query: 229 --------------------SGC--------------LELGEKVHVFVKMRGFEMGAILG 254
+ C L +G+K+H + G + ++
Sbjct: 230 RPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVW 289
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
+L+ MY K G++ +A+ +FD M ER++ +W MI +G EE LFR L I+
Sbjct: 290 CSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIM 349
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PND TF GVL+AC D+G+QI M RV G + +V + +CG + A+
Sbjct: 350 PNDFTFAGVLNACADLAAEDLGKQIHAYMVRV-GFDSFSSAASALVHMYSKCGDIENAKS 408
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + ++ +PD+ W +LL HG + A
Sbjct: 409 VFE-ILPQPDLFSWTSLLVGYAQHGQHDKA 437
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 40/289 (13%)
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
Q+L +P + ++L C + L+ G++VH +K G +G + L+ MY K G
Sbjct: 109 QLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCG 167
Query: 266 ALA-------------------------------KAKALFDSMPERNIATWNAMISGLAS 294
+L KA+ LFD MP R+ +W A+ISG
Sbjct: 168 SLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQ 227
Query: 295 HGHAEEALDLFRKLEKEQIVP-NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
H EEAL+L+R ++K N T L+A + +G++I G + R+ G++
Sbjct: 228 HNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRM-GLDSDE 286
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII- 412
+ ++D+ G+CG + EA + +M + DVV W ++ +G E + + ++
Sbjct: 287 VVWCSLLDMYGKCGSIEEARYIFDKMEER-DVVSWTTMIHTYLKNGRREEGFALFRHLMN 345
Query: 413 -ALEPNNHGVYVVLSNMYAE--AESMKMQLEILLVQVLFAGLASAADIL 458
+ PN+ VL N A+ AE + Q+ +V+V F +SAA L
Sbjct: 346 SNIMPNDFTFAGVL-NACADLAAEDLGKQIHAYMVRVGFDSFSSAASAL 393
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 234/404 (57%), Gaps = 2/404 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
+ LK++H + A+ +A A + G L + R+F+ + + WN L
Sbjct: 322 ELQSLKELHGYSWRHGLQSNELVANAFIA--AYTRCGALCSSERVFDLMDTKTVSSWNAL 379
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
+ A + +P KA+ LY+ M +G P+ T +L ACS ++SL+ ++IH ++GL
Sbjct: 380 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 439
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+D + L+ Y A+ +FD + +R+L W MI+GY+Q+ +EA+ LF Q
Sbjct: 440 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQ 499
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
ML +G +P + + V AC+Q L LG+++H F + ++++ MY K G
Sbjct: 500 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 559
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ ++ +FD + E+++A+WN +I+G HG +EAL+LF K+ + + P+D TF G+L A
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 619
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG ++ G + F M ++ IEPK+EHY C+VD+LGR G++ +A LI+ M PD
Sbjct: 620 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSR 679
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+W +LL++C+ HGN+ + E+V +++ LEP YV++SN++A
Sbjct: 680 IWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 723
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 192/391 (49%), Gaps = 21/391 (5%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
++ ++++++ + D ++ R L S A LF+ N WN++I A
Sbjct: 235 LNEELMVNNSLIDMYSKCRFL-----------SEAQLLFDKNDKKNIVSWNSMIGGYARE 283
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTF--VLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + +L M+ FT VL C L K++H + + GL +
Sbjct: 284 EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNEL 343
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N + Y+ L ++ +VFD + +T++ W ++ GYAQ+ +AL L+ QM G
Sbjct: 344 VANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSG 403
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+ T+ S+L AC++ L GE++H F G + +G +L+ +Y G A+
Sbjct: 404 LDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQ 463
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LFD M R++ +WN MI+G + +G +EA++LFR++ + I P +I + V AC
Sbjct: 464 VLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLS 523
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ +G+++ + + E I ++D+ + G + ++ + R+ K DV W +
Sbjct: 524 ALRLGKELHCFALKAHLTE-DIFVSSSIIDMYAKGGCIGLSQRIFDRLREK-DVASWNVI 581
Query: 392 LAACKNHGN----IEVAERVVKEIIALEPNN 418
+A HG +E+ E++++ + L+P++
Sbjct: 582 IAGYGIHGRGKEALELFEKMLR--LGLKPDD 610
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 175/375 (46%), Gaps = 10/375 (2%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAA-SRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
K + +++H + S++ + F +R++ S G S + +F+ ++ N F WN
Sbjct: 12 KDIEVGRRLHEMVSASTQFCNDFVLNTRIITM--YSMCGSPSDSRMVFDKLRRKNLFQWN 69
Query: 85 TLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
++ A + + A+ ++ + T P+ T V+KAC+ + L + IH +K
Sbjct: 70 AIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATK 129
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
L D+ V N L+ Y + A +VF+ + R L W ++I G++++ E+
Sbjct: 130 MDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNA 189
Query: 204 FDQMLM--EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
F +ML+ E F P+ TL +VL CA +E G VH G ++ +L+ MY
Sbjct: 190 FREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMY 249
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE--QIVPNDIT 319
+K L++A+ LFD ++NI +WN+MI G A L +K++ E ++ ++ T
Sbjct: 250 SKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFT 309
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+ VL C + +++ G R +G++ + RCG + +E + M
Sbjct: 310 ILNVLPVCLERSELQSLKELHGYSWR-HGLQSNELVANAFIAAYTRCGALCSSERVFDLM 368
Query: 380 VWKPDVVMWGALLAA 394
K V W ALL
Sbjct: 369 DTKT-VSSWNALLCG 382
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 148/278 (53%), Gaps = 6/278 (2%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC-LVRCYSVSSDLNNARQVFDEIRNR 179
+L+AC + + +++H VS S + V+N ++ YS+ +++R VFD++R +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEKV 238
L W ++S Y ++ +A+ +F +++ + +P++ TL V+ ACA L LG+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H +G AL+ MY K G + +A +F+ MPERN+ +WN++I G + +G
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 299 EEALDLFRKL--EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+E+ + FR++ +E VP+ T V VL C I+ G + G ++ G+ ++
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKL-GLNEELMVN 242
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++D+ +C + EA+ L + K ++V W +++
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSMIGG 279
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 161/346 (46%), Gaps = 11/346 (3%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S L I L L + KS+H ++IH + + D F LL+ G
Sbjct: 402 SGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSL--YICCGKP 459
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A LF+ ++ + WN +I + + PD+AI L+ M G P + V AC
Sbjct: 460 FAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGAC 519
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S + +L K++H K+ L D+ V + ++ Y+ + ++++FD +R + + W
Sbjct: 520 SQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWN 579
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKM 244
+I+GY R EAL LF++ML G +P+ T +L AC+ +G +E G E + + +
Sbjct: 580 VIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNL 639
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGH---AEE 300
E T +V M + G + A L + MP + + W++++S HG+ E+
Sbjct: 640 HNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEK 699
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+ +LE E+ P + + L A +G D R++ G MK +
Sbjct: 700 VANKLLELEPEK--PENYVLISNLFA--GSGKWDDVRRVRGRMKDI 741
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 233/430 (54%), Gaps = 33/430 (7%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H ++ + F + L+ L G L A +F+ + WN +I A
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTALVQMYLLC--GQLDTARGVFDVCPKADVITWNMIISAYN 216
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+++ L++ M P T VL ACS ++ L K++H++V ++ +L
Sbjct: 217 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 276
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT------------------------- 186
+ N ++ Y+ ++++A +F + NR + WTT
Sbjct: 277 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 336
Query: 187 ------MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
MI GY +S R EAL LF M +P+ T+ SVL+ACA G LELGE +
Sbjct: 337 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRT 396
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
++ + + AL+ MY K G + KA+++F M +R+ TW AMI GLA +GH E+
Sbjct: 397 YIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 456
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
ALD+F + K I+P++IT++GVLSAC H G +D GR+ F M +GIEP I HYGC+V
Sbjct: 457 ALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLV 516
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
DLL R G++ EA E+I+ M K + ++WGALLA C+ + ++AE VVK+I+ LEP+N
Sbjct: 517 DLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGA 576
Query: 421 VYVVLSNMYA 430
VYV+L N+YA
Sbjct: 577 VYVLLCNIYA 586
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 212/434 (48%), Gaps = 41/434 (9%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S+L+ P PL L + C+SM QL+Q+H Q I + +R++ FC GD
Sbjct: 30 SALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDF 89
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
YA RLF+ I PN F+WNT+IR + P + LY+ M R G P+++TF F+ K
Sbjct: 90 QYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGF 149
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ +L +Q+H HV K GL ++ V LV+ Y + L+ AR VFD + W
Sbjct: 150 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+IS Y + + E+ LF M + P +VTL VLSAC++ L G+KVH +VK
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 269
Query: 246 GFEMGAILGTALVHMY-------------------------------TKNGALAKAKALF 274
E +L A++ MY T G + A+ F
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 329
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
D MPE++ +W AMI G +EAL+LFR ++ + P++ T V VL+AC H G ++
Sbjct: 330 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 389
Query: 335 VGRQIFGSMKRVYGIEPKIEH----YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+G I R Y KI++ ++D+ +CG V +AE + + M + D W A
Sbjct: 390 LGEWI-----RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTA 443
Query: 391 LLAACKNHGNIEVA 404
++ +G+ E A
Sbjct: 444 MIVGLAVNGHGEKA 457
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 225/403 (55%), Gaps = 35/403 (8%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFV 121
G + A LF S+ + WN +I + KA+ L+ M + AP++ T T V
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE------ 175
L AC+N+ ++ KQ+H ++ ++ + + V N L+ Y+ S + NAR++ D+
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 363
Query: 176 ---------------------------IRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ NR + WT MI GY Q+ R +EA+ LF M+
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G EPNS TLA+VLS CA CL+ G+++H E + + A++ MY ++G+
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFP 483
Query: 269 KAKALFDSMPERN-IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +FD + R TW +MI LA HG EEA+ LF ++ + + P+ IT+VGVLSAC
Sbjct: 484 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 543
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAGF++ G++ + +K + I P++ HY CMVDLL R G EA+E I+RM +PD +
Sbjct: 544 SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA 603
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
WG+LL+AC+ H N E+AE +++++++PNN G Y ++N+Y+
Sbjct: 604 WGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 646
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 209/497 (42%), Gaps = 103/497 (20%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSS--SGDLSYATRLFNSI--QSPNHFMWNTLI 87
+ IHA+ + + + + + LL++ ++ +G L A RLF+ I N F WN+L+
Sbjct: 46 RAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLL 105
Query: 88 R--AQASSLNPDKAIFLYM-----------------------------NMRRTGFAPNQH 116
A++ L + +F M +M GF P Q
Sbjct: 106 SMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 165
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCY---------------- 160
T T VL +C+ ++ +++H+ V K GL + V N ++ Y
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 225
Query: 161 ---SVSS------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
SVSS ++ A +F+ + +R++ W MI+GY Q+ +AL LF
Sbjct: 226 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 285
Query: 206 QMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFV---------------------- 242
+ML E P+ T+ SVLSACA G + +G++VH ++
Sbjct: 286 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 345
Query: 243 -----------KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
+ ++ I TAL+ Y K G + A+ +F M R++ W AMI G
Sbjct: 346 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 405
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
+G +EA+DLFR + PN T VLS C +D G+QI R +E
Sbjct: 406 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LEQ 464
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++ + R G A + ++ W+ + + W +++ A HG E A + +E+
Sbjct: 465 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524
Query: 412 I--ALEPNNHGVYVVLS 426
+ +EP+ VLS
Sbjct: 525 LRAGVEPDRITYVGVLS 541
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 170/412 (41%), Gaps = 104/412 (25%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD----LNNARQVF 173
+ +L+ C + + IH K+GL ++ N L+ Y ++ L +AR++F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 174 DEI----RN-----------------------------RTLNVWTTMISGYAQSFRANEA 200
DEI RN R WT M+ G ++ R EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ M +GF P TL +VLS+CA + +G KVH FV G + ++++M
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 261 YTKN-------------------------------GALAKAKALFDSMPERNIATWNAMI 289
Y K G + A++LF+SMP+R+I +WNAMI
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMI 268
Query: 290 SGLASHGHAEEALDLF-RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR--- 345
+G +G +AL LF R L + + P++ T VLSAC + G + +G+Q+ + R
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328
Query: 346 ------------VYGIEPKIEHYGCMVD---------------LLG--RCGKVLEAEELI 376
Y +E+ ++D L G + G + A E+
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL--EPNNHGVYVVLS 426
M DVV W A++ + +G + A + + +I EPN++ + VLS
Sbjct: 389 GVMN-NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 439
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 211/371 (56%), Gaps = 1/371 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-NQHTFTFV 121
G L A LF+ + ++F W +I P++A+ L+ M+R+ + N+ T +
Sbjct: 150 GLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSA 209
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L A + V L K+IH ++ ++GLD D V + L Y + AR +FD++ +R +
Sbjct: 210 LAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDI 269
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
WT MI Y Q R E LF +L G PN T + VL+ACA ELG+KVH +
Sbjct: 270 VTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGY 329
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ GF+ + +ALVHMY+K G + A+ +F P+ ++ +W ++I+G A +G +EA
Sbjct: 330 MTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEA 389
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+ F L K P+ ITFVGVLSAC HAG +D G F S+K YG+ +HY C++D
Sbjct: 390 IRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIID 449
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LL R G+ EAE +I +M KPD +W +LL C+ HGN+++A+R + + +EP N
Sbjct: 450 LLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPAT 509
Query: 422 YVVLSNMYAEA 432
YV L+N+YA A
Sbjct: 510 YVTLANIYATA 520
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 184/355 (51%), Gaps = 7/355 (1%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L L A ++ + I P+ +++TLI++ S + ++ +++ +GF P
Sbjct: 49 LCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFIL 108
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
+L+ + SL +++ + + DL N L+ Y+ L A+ +FD++
Sbjct: 109 NRLLEMYAKCDSLMDSQKLFDEMPER----DLCSWNILISGYAKMGLLQEAKSLFDKMPE 164
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLM-EGFEPNSVTLASVLSACAQSGCLELGEK 237
R WT MISGY + R NEAL LF M + + N T++S L+A A CL +G++
Sbjct: 165 RDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKE 224
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H ++ G + ++ +AL MY K G++ +A+ +FD M +R+I TW AMI G
Sbjct: 225 IHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGR 284
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+E DLF L + I PN+ TF GVL+AC + ++G+++ G M RV G +P
Sbjct: 285 RKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRV-GFDPFSFAAS 343
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+V + +CG ++ AE + K +PD+ W +L+A +G + A R + ++
Sbjct: 344 ALVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLIAGYAQNGQPDEAIRYFELLV 397
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 125/306 (40%), Gaps = 53/306 (17%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K++H M FAAS L+ S G++ A R+F P+ F W +LI A
Sbjct: 324 KKVHGYMTRVGFDPFSFAASALVHM--YSKCGNMVSAERVFKETPQPDLFSWTSLIAGYA 381
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ PD+AI + + ++G P+ TF VL AC+ H + GLD
Sbjct: 382 QNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACA-----------HAGLVDKGLDY--- 427
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ + Y ++ T + + +I A+S + +EA + +M M
Sbjct: 428 -FHSIKEQYGLT---------------HTADHYACIIDLLARSGQFDEAENIISKMSM-- 469
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+ AS+L C G L+L ++ + E A T L ++Y G ++
Sbjct: 470 -KPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVT-LANIYATAGMWSEVA 527
Query: 272 ALFDSMPERNIA-----TWNAM-------ISGLASHGHAEEALDLFRKLEK----EQIVP 315
+ +M +R + +W A+ + G SH ++E + KL K E VP
Sbjct: 528 KIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVP 587
Query: 316 NDITFV 321
D FV
Sbjct: 588 -DTNFV 592
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 224/403 (55%), Gaps = 31/403 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
G++ A +LFN ++ + W+ LI + ++A+ L+ M G ++
Sbjct: 233 FGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVV 292
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD------------- 165
VL ACS + + K +H V K G++ +++ N L+ YS +
Sbjct: 293 LSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCC 352
Query: 166 ------------------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ AR +FD + ++ W+ MISGYAQ R E L+LF +M
Sbjct: 353 LDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM 412
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+EG +P+ L SV+SAC L+ G+ +H +++ G ++ ILGT L++MY K G +
Sbjct: 413 QIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCV 472
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A +F + E+ ++TWNA+I GLA +G +++L F ++++ + PN+ITFV VL AC
Sbjct: 473 EDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGAC 532
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G +D G + F SM + + I P I+HYGCMVDLLGR G + EAEELI+ M PDV
Sbjct: 533 RHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVST 592
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
WGALL ACK +G+ E ER+ ++++ L P++ G V+LSN+YA
Sbjct: 593 WGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYA 635
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 197/395 (49%), Gaps = 41/395 (10%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
+P L +P L KC+++ Q QI +QMI+S +D FAASRLL F +++ +
Sbjct: 21 KPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSY 80
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
++F+ I++PN F+ NT+++ +P KAI++Y M + A + +T+ + ++CS
Sbjct: 81 QIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRL 140
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+ K I HV K G D D+++ N L+ Y+V +L++AR+VFD + W +M++
Sbjct: 141 AEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLA 200
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY EA ++D+M P +AS
Sbjct: 201 GYVLVGNVEEAKDVYDRM------PERNVIAS---------------------------- 226
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+++ ++ K G + +A LF+ M ++++ +W+A+IS + EEAL LF+++
Sbjct: 227 -----NSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMN 281
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
I+ +++ + VLSAC + G+ + G + +V GIE + ++ + C +V
Sbjct: 282 ANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKV-GIETYVNLQNALIHMYSSCEEV 340
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ A++L D + W ++++ G IE A
Sbjct: 341 VTAQKLFSESCC-LDQISWNSMISGYVKCGEIEKA 374
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 159/318 (50%), Gaps = 14/318 (4%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++ A LF+S+ ++ W+ +I A + + L+ M+ G P++ V+
Sbjct: 369 GEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVI 428
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+++ +L+ K IH ++ K+GL +++ + L+ Y + +A +VF + + ++
Sbjct: 429 SACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVS 488
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +I G A + +++L F +M G PN +T +VL AC G ++ G + H
Sbjct: 489 TWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHR-HFNS 547
Query: 243 KMRGFEMGAILGT--ALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAE 299
++ ++G + +V + + G L +A+ L +SMP +++TW A++ +G E
Sbjct: 548 MIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNE 607
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLS--ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+ RKL ++ P+ F +LS ++DV ++ G M R +G+ ++ G
Sbjct: 608 TGERIGRKL--VELHPDHDGFNVLLSNIYASKGNWVDV-LEVRGMM-RQHGV---VKTPG 660
Query: 358 C-MVDLLGRCGKVLEAEE 374
C M++ GR + L ++
Sbjct: 661 CSMIEAHGRVHEFLAGDK 678
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 38/299 (12%)
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N ++ + ++ A ++F+E++ + L W+ +IS Y Q+ EAL+LF +M G
Sbjct: 227 NSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIM 286
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
+ V + SVLSAC++ + G+ VH V G E L AL+HMY+ + A+ L
Sbjct: 287 VDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKL 346
Query: 274 FDSMPERNIATWNAMISGLASHGHAE-------------------------------EAL 302
F + +WN+MISG G E E L
Sbjct: 347 FSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETL 406
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
LF++++ E P++ V V+SAC H +D G+ I +++ G++ I ++++
Sbjct: 407 VLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRK-NGLKINIILGTTLINM 465
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
+ G V +A E+ K + K V W AL+ +G ++ + + E+ HGV
Sbjct: 466 YMKLGCVEDALEVFKGLEEK-GVSTWNALILGLAMNGLVDKSLKTFSEM-----KEHGV 518
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 236/418 (56%), Gaps = 5/418 (1%)
Query: 18 LSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFN 73
LS + C +M L +Q+H+Q I D L+ + S G + A ++F+
Sbjct: 274 LSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFD 333
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
I N F W +I D+ A+ L+ M T PN TF+ LKAC+N+ +L
Sbjct: 334 QILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALR 393
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+Q+ TH K G V N L+ Y+ S +++AR+ FD + + L + T+I YA
Sbjct: 394 IGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
++ + EAL LF+++ +G ++ T AS+LS A G + GE++H V G ++
Sbjct: 454 KNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+ AL+ MY++ G + A +F+ M +RN+ +W ++I+G A HG A +AL+LF K+ +E
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ PN +T++ VLSAC H G ++ G + F SM +G+ P++EHY CMVD+LGR G + EA
Sbjct: 574 VRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEA 633
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ I M +K D ++W L AC+ HGN+E+ + K II EP++ Y++LSN+YA
Sbjct: 634 IQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYA 691
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 201/407 (49%), Gaps = 22/407 (5%)
Query: 19 SLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
SL KC +S +H ++ S D + L++ S G AT +F +
Sbjct: 70 SLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISL--YSKCGQWEKATSIFQLM 127
Query: 76 QSPNHFM-WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
S + W+ ++ A++ +A+ +++M G+ PN++ F +ACS ++
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 135 KQIHTHVSKSG-LDLDLHVVNCLVRCY-SVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
I V K+G L D+ V L+ + DL +A +VF+++ R WT MI+
Sbjct: 188 DSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
Q A EA+ LF +M++ G+EP+ TL+ V+SACA L LG+++H G +
Sbjct: 248 QFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRC 307
Query: 253 LGTALVHMYTK---NGALAKAKALFDSMPERNIATWNAMISGLASH-GHAEEALDLFRKL 308
+G L++MY K +G++ A+ +FD + + N+ +W AMI+G G+ EEALDLFR +
Sbjct: 308 VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGM 367
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC----MVDLLG 364
++PN TF L AC + + +G Q+F + ++ C ++ +
Sbjct: 368 ILTHVIPNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYA 422
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
R G++ +A + ++++ +++ + ++ A + N E A + EI
Sbjct: 423 RSGRIDDARKAFD-ILFEKNLISYNTVIDAYAKNLNSEEALELFNEI 468
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 151/311 (48%), Gaps = 8/311 (2%)
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
KAI +M G P+ T++ LK C RS + +H +++S L LD +N L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 158 RCYSVSSDLNNARQVFDEI-RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
YS A +F + +R L W+ M+S +A + AL+ F M+ G+ PN
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMGAILGTALVHMYTK-NGALAKAKALF 274
A+ AC+ + + +G+ + FV G+ + +G L+ M+ K G L A +F
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
+ MPERN TW MI+ L G+A EA+DLF ++ P+ T GV+SAC + +
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLL 288
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC---GKVLEAEELIKRMVWKPDVVMWGAL 391
+G+Q+ R +G+ C++++ +C G + A ++ +++ +V W A+
Sbjct: 289 LGQQLHSQAIR-HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL-DHNVFSWTAM 346
Query: 392 LAACKNHGNIE 402
+ G +
Sbjct: 347 ITGYVQKGGYD 357
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 256/451 (56%), Gaps = 35/451 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L+L A++ ++ +Q +QIHA +I ++ ++ + L+ S G L+YA +FN +
Sbjct: 486 LTLCANQ-RNDNQGRQIHAHLIRANITKNIIVETELVHM--YSECGRLNYAKEIFNRMAE 542
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
N + WN++I + +A+ L+ M+ G P+ + + +L +C ++ +++
Sbjct: 543 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 602
Query: 138 HTHVSKSGLDLD--LHVV-----------------------------NCLVRCYSVSSDL 166
H + ++ ++ + L VV N +V + S
Sbjct: 603 HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRA 662
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
N+A+ +FD++ R +W ++++GYA E+ F +ML E + +T+ ++++ C
Sbjct: 663 NDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLC 722
Query: 227 AQSGCLELGEKVHVFVKMRGF-EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
+ LE G+++H + +GF +L TALV MY+K GA+ KA+ +FD+M +NI +W
Sbjct: 723 SSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 782
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
NAMISG + HG ++EAL L+ ++ K+ + PN++TF+ +LSAC H G ++ G +IF SM+
Sbjct: 783 NAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 842
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
Y IE K EHY CMVDLLGR G++ +A+E +++M +P+V WGALL AC+ H ++++
Sbjct: 843 DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGR 902
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ + L+P N G YV++SN+YA A K
Sbjct: 903 LAAQRLFELDPQNPGPYVIMSNIYAAAGRWK 933
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 194/394 (49%), Gaps = 5/394 (1%)
Query: 14 PIPPLSLLAD--KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATR 70
P+P SL+ D S + K IH QMI + D + +++L A S DL YA +
Sbjct: 71 PLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARK 130
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
LF + N WNT+I A A + + + LY MR +G ++ TF V+KAC +
Sbjct: 131 LFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMED 190
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
+ +Q+ + V K+GL+ +L V LV Y+ +++A DEI ++ W +I+G
Sbjct: 191 MGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAG 250
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
Y + EA +FD+ML G P++ T AS L C + G++VH + GF+
Sbjct: 251 YVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 310
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+G AL+ MY K +FD M ERN TWN++IS A GH +AL LF ++++
Sbjct: 311 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 370
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
N +L A I GR++ G + R + I +VD+ +CG V
Sbjct: 371 SGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGMVE 429
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
EA ++ + ++ + +V + ALLA G E A
Sbjct: 430 EAHQVFRSLLERNEVS-YNALLAGYVQEGKAEEA 462
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 191/377 (50%), Gaps = 5/377 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A + I+ + WN +I L+ ++A ++ M + G P+ TF L
Sbjct: 224 GWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASAL 283
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+ C +RS + KQ+H+ + G D V N L+ Y+ D + +VFDE+ R
Sbjct: 284 RVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQV 343
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W ++IS AQ N+AL+LF +M G++ N L S+L A A + G ++H +
Sbjct: 344 TWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHL 403
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
ILG+ALV MY+K G + +A +F S+ ERN ++NA+++G G AEEAL
Sbjct: 404 VRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEAL 463
Query: 303 DLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+L+ ++ E I P+ TF +L+ C + + GRQI + R I I +V
Sbjct: 464 ELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA-NITKNIIVETELVH 522
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNH 419
+ CG++ A+E+ RM + + W +++ + +G + A R+ K++ ++P+
Sbjct: 523 MYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 581
Query: 420 GVYVVLSNMYAEAESMK 436
+ +LS+ + ++S K
Sbjct: 582 SLSSMLSSCVSLSDSQK 598
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 35/400 (8%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++H ++ + D S L+ S G + A ++F S+ N +N L+
Sbjct: 397 RELHGHLVRNLLNSDIILGSALVDM--YSKCGMVEEAHQVFRSLLERNEVSYNALLAGYV 454
Query: 92 SSLNPDKAIFLYMNMR-RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
++A+ LY +M+ G P+Q TFT +L C+N R+ N +QIH H+ ++ + ++
Sbjct: 455 QEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 514
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V LV YS LN A+++F+ + R W +MI GY Q+ EAL LF QM +
Sbjct: 515 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 574
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA-- 268
G +P+ +L+S+LS+C + G ++H F+ E IL LV MY K G++
Sbjct: 575 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYA 634
Query: 269 -----------------------------KAKALFDSMPERNIATWNAMISGLASHGHAE 299
AK LFD M +RN A WN++++G A+ G +
Sbjct: 635 WKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKK 694
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
E+ + F ++ + I + +T V +++ C ++ G Q+ + + + + +
Sbjct: 695 ESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETAL 754
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
VD+ +CG + +A + M K ++V W A+++ HG
Sbjct: 755 VDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHG 793
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 225/403 (55%), Gaps = 35/403 (8%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFV 121
G + A LF S+ + WN +I + KA+ L+ M + AP++ T T V
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 197
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE------ 175
L AC+N+ ++ KQ+H ++ ++ + + V N L+ Y+ S + NAR++ D+
Sbjct: 198 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 257
Query: 176 ---------------------------IRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ NR + WT MI GY Q+ R +EA+ LF M+
Sbjct: 258 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 317
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G EPNS TLA+VLS CA CL+ G+++H E + + A++ MY ++G+
Sbjct: 318 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFP 377
Query: 269 KAKALFDSMPERN-IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +FD + R TW +MI LA HG EEA+ LF ++ + + P+ IT+VGVLSAC
Sbjct: 378 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 437
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAGF++ G++ + +K + I P++ HY CMVDLL R G EA+E I+RM +PD +
Sbjct: 438 SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA 497
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
WG+LL+AC+ H N E+AE +++++++PNN G Y ++N+Y+
Sbjct: 498 WGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 187/435 (42%), Gaps = 68/435 (15%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
+ SG L+ A +F + + W ++ + +AI ++M GF P Q T
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCY------------------ 160
T VL +C+ ++ +++H+ V K GL + V N ++ Y
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 161 -SVSS------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
SVSS ++ A +F+ + +R++ W MI+GY Q+ +AL LF +M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 208 LME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFV------------------------ 242
L E P+ T+ SVLSACA G + +G++VH ++
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 241
Query: 243 ---------KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
+ ++ I TAL+ Y K G + A+ +F M R++ W AMI G
Sbjct: 242 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 301
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+G +EA+DLFR + PN T VLS C +D G+QI R +E
Sbjct: 302 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LEQSS 360
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII- 412
++ + R G A + ++ W+ + + W +++ A HG E A + +E++
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420
Query: 413 -ALEPNNHGVYVVLS 426
+EP+ VLS
Sbjct: 421 AGVEPDRITYVGVLS 435
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
M+ K+G LA A+ +F MPER+ +W M+ GL G EA+ + + P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
VLS+C VGR++ + ++ G+ + ++++ G+CG A + +RM
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKL-GLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ V W A+++ + G +++AE + + +
Sbjct: 120 PVRS-VSSWNAMVSLNTHLGRMDLAESLFESM 150
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 244/463 (52%), Gaps = 72/463 (15%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M + + D LL A++ G +++A +F+ I P+ FM+NTLIR A + P
Sbjct: 1 MALRGFLSDPSELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPR 60
Query: 98 KAIFLYMNM----RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
A+ LY M G P++ TF FVL+AC+ + + + Q+H HV K+G + D V
Sbjct: 61 DAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVK 120
Query: 154 NCLVRCYSV-------------------------------SSDLNNARQVFDE------- 175
N L+ ++ D+ AR +FDE
Sbjct: 121 NALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLV 180
Query: 176 ------------------------IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ R + W MISGY + AL LF+QM G
Sbjct: 181 SWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMG 240
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHV----FVKMRGFEMGAILGTALVHMYTKNGAL 267
+P+ VT+ S+LSACA SG L++G+++H GF + +LG AL+ MY K G++
Sbjct: 241 EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNGFPV--VLGNALIDMYAKCGSM 298
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A +F SM +++++TWN+++ GLA HGH E++D+F K+ K ++ P++ITFV VL AC
Sbjct: 299 KSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIAC 358
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G +D GR+ F M+ Y +EP I+HYGC+VD+LGR G + EA E I M +P+ V+
Sbjct: 359 SHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVI 418
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
W LL+AC+ HG IE+A+ ++++ + G YV+LSN+YA
Sbjct: 419 WRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYA 461
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 21/293 (7%)
Query: 161 SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG----FEPNS 216
+V + +A VFD+I ++ T+I G A + +A+ L+ +ML G P+
Sbjct: 23 AVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDK 82
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+T VL AC G + G +VH V G E A + AL+ M+ G L A ALFD
Sbjct: 83 LTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDG 142
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+ W+AMI+G A G A DLF + + +V ++ +++A G + +
Sbjct: 143 RAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSWNV----MITAYAKRGDMALA 198
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL---IKRMVWKPDVVMWGALLA 393
R++F + E + + M+ RCG L A EL ++RM KPD+V +LL+
Sbjct: 199 RELFDQVP-----ERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLS 253
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN----MYAEAESMKMQLEIL 442
AC + G+++V +R+ + + N G VVL N MYA+ SMK E+
Sbjct: 254 ACADSGDLDVGQRLHSSLSDMFSRN-GFPVVLGNALIDMYAKCGSMKSAHEVF 305
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 221/374 (59%), Gaps = 1/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+L+ AT +F + W ++I A AI L+ M+ G P+ +T T
Sbjct: 342 SKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVT 401
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
++ AC+ SL+ + +H++V K+G+ +L V N L+ Y+ + AR VF +I +
Sbjct: 402 SIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK 461
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W TMI GY+Q+ NEAL LF M + F+P+ +T+A VL ACA L+ G ++H
Sbjct: 462 DIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIH 520
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ RG+ + ALV MY K G L A+ LFD +P++++ +W MI+G HG
Sbjct: 521 GHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGN 580
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA+ F ++ I P++ +F +L+AC H+G ++ G + F SM+ G+EPK+EHY C+
Sbjct: 581 EAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACV 640
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R G + +A + I+ M KPD +WG LL+ C+ H ++++AE+V + I LEP+N
Sbjct: 641 VDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNT 700
Query: 420 GVYVVLSNMYAEAE 433
YVVL+N+YAEAE
Sbjct: 701 RYYVVLANVYAEAE 714
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 193/368 (52%), Gaps = 9/368 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A LF+ + P+ WN++I + + +++ M G + T VL
Sbjct: 244 GGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL 303
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+N+ +L+ + +H K+ ++ N L+ YS +LN A +VF ++ + T+
Sbjct: 304 VACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIV 363
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT++I+ Y + ++A+ LFD+M +G P+ T+ S++ ACA S L+ G VH +V
Sbjct: 364 SWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 423
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + AL++MY K G++ +A+ +F +P ++I +WN MI G + + EAL
Sbjct: 424 IKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEAL 483
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYGC-MV 360
+LF ++K Q P+DIT VL AC +D GR+I G ++R Y + H C +V
Sbjct: 484 ELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL---HVACALV 539
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH--GNIEVAERVVKEIIALEPNN 418
D+ +CG ++ A +L+ M+ K D++ W ++A H GN ++ I +EP+
Sbjct: 540 DMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 598
Query: 419 HGVYVVLS 426
+L+
Sbjct: 599 SSFSAILN 606
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 190/377 (50%), Gaps = 5/377 (1%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L A+K KS+ K++H+ +IIS+ I A L F ++ GDL ++F+ I +
Sbjct: 101 LQLCAEK-KSLEDGKRVHS-VIISNGISVDEALGAKLVFMYVNC-GDLVQGRKIFDKIMN 157
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
F+WN L+ A N +++ L+ M++ G N +TFT VLK + + + CK++
Sbjct: 158 DKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV 217
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H +V K G + VVN L+ Y + +A +FDE+ + W +MI+G + +
Sbjct: 218 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 277
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
L +F QML+ G E + TL SVL ACA G L LG +H F F + L
Sbjct: 278 GNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTL 337
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ MY+K G L A +F M + I +W ++I+ G +A+ LF +++ + + P+
Sbjct: 338 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDI 397
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
T ++ AC + +D GR + + + G+ + ++++ +CG V EA +
Sbjct: 398 YTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYAKCGSVEEARLVFS 456
Query: 378 RMVWKPDVVMWGALLAA 394
++ K D+V W ++
Sbjct: 457 KIPVK-DIVSWNTMIGG 472
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 144/280 (51%), Gaps = 4/280 (1%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
+++ VL+ C+ +SL K++H+ + +G+ +D + LV Y DL R++FD+
Sbjct: 95 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDK 154
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
I N + +W ++S YA+ E++ LF +M G N T VL A G ++
Sbjct: 155 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 214
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
++VH +V GF + +L+ Y K G + A LFD + E ++ +WN+MI+G +
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIE 354
G + L++F ++ + + T V VL AC + G + +GR + G +K + E +
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEE--VV 332
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++D+ +CG + A E+ +M +V W +++AA
Sbjct: 333 FSNTLLDMYSKCGNLNGATEVFVKM-GDTTIVSWTSIIAA 371
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
+ +E + SVL CA+ LE G++VH + G + LG LV MY G L +
Sbjct: 88 KSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQ 147
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
+ +FD + + WN ++S A G+ E++ LF+K++K +V N TF VL
Sbjct: 148 GRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAA 207
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
G + +++ G + ++ G ++ + G V A L + +PDVV W
Sbjct: 208 LGKVKECKRVHGYVLKL-GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWN 265
Query: 390 ALLAACKNHG 399
+++ C +G
Sbjct: 266 SMINGCVVNG 275
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 248/445 (55%), Gaps = 28/445 (6%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+SLL + CK+ Q+ IHA++I + QD F L+ C+ S D YA +F + +
Sbjct: 33 ISLLRN-CKNNAQVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSID--YAYDVFRYVSN 89
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
PN +++ +I SS + LY M + P+ + T VLKAC L+ C++I
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKACG----LDECREI 145
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H+ V K G V L+ Y S +L +A++VFDE+ +R V T MI+ Y++
Sbjct: 146 HSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVATVMINCYSECGCI 205
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL---------------------GE 236
EAL LF + ++ + + ++ + LEL G
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQLSVFYLPARIWVRWSSGA 265
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
VH FV+ + E+ +G AL++MY++ G + AK +F M ++++ ++N MISGLA HG
Sbjct: 266 GVHSFVENQKMELSNFVGNALINMYSRCGDINVAKRVFKGMRDKDVISYNTMISGLAMHG 325
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ EA+++FR + PN +T V +L+AC H G +D+G ++F SM RV+ +EP+IEHY
Sbjct: 326 ASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVFSVEPQIEHY 385
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GC+VDLLGR G++ EA I+ M+ +PD +M GALL+ACK HGN+E+ E++ K + E
Sbjct: 386 GCIVDLLGRVGRLEEAYRFIENMLIEPDHIMLGALLSACKIHGNMELGEKIAKRLFESEN 445
Query: 417 NNHGVYVVLSNMYAEAESMKMQLEI 441
+ G YV+LS++YA + K EI
Sbjct: 446 PDSGTYVLLSHIYASSGKWKESTEI 470
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 227/401 (56%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH MI + D + L+ A G L A ++F I + +WN LI +
Sbjct: 325 RQIHGFMIKACADSDDYIGVALVDMYA--KYGLLDDARKVFEWIPRKDLLLWNALISGCS 382
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+++ L+ MR+ G N+ T VLK+ +++ +++ Q+H K G D H
Sbjct: 383 HGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSH 442
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
VVN L+ Y + L A +VF+E + + +T+MI+ +Q +A+ LF +ML +G
Sbjct: 443 VVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 502
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ L+S+L+ACA E G++VH + R F G ALV+ Y K G++ A
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD 562
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F +P++ + +W+AMI GLA HGH + ALD+FR++ E+I PN IT VL AC HAG
Sbjct: 563 LAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D + F SMK ++GI+ EHY CM+DLLGR GK+ +A EL+ M ++ + +WGAL
Sbjct: 623 LVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGAL 682
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LAA + H + E+ + +++ LEP G +V+L+N YA A
Sbjct: 683 LAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASA 723
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 200/399 (50%), Gaps = 24/399 (6%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAF---CALSSSGDLS 66
+ P I PL +S+ IHA ++ S + H + LL+F C L S
Sbjct: 2 RSPESISPLLTRYAATQSLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGS---- 55
Query: 67 YATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
A R+F+ P H W++L+ A +++ P +A+ + MR G N+ VLK C+
Sbjct: 56 -ARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CA 113
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-RNRTLNVWT 185
L Q+H +GL D+ V N LV Y ++ AR+VFDE R+R W
Sbjct: 114 PDAGLGV--QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWN 171
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
M+S + ++ R ++A+ LF +M+ G PN + V++AC S LE G KVH V
Sbjct: 172 GMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRT 231
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G++ ALV MY+K G + A +F +P+ ++ +WNA ISG HGH + AL+L
Sbjct: 232 GYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELL 291
Query: 306 RKLEKEQIVPNDITFVGVLS--ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-CMVDL 362
+++ +VPN T +L A AG +GRQI G M + ++ G +VD+
Sbjct: 292 LQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFM--IKACADSDDYIGVALVDM 349
Query: 363 LGRCGKVLEAEELIKRMVWKP--DVVMWGALLAACKNHG 399
+ G + +A ++ + W P D+++W AL++ C + G
Sbjct: 350 YAKYGLLDDARKVFE---WIPRKDLLLWNALISGCSHGG 385
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 5/297 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN-SIQSPNHFMWNTLIRAQA 91
Q+HA + + D F A+ L+A G + A R+F+ + + N WN ++ A
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAM--YGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFV 178
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ L+ M +G PN+ F+ V+ AC+ R L +++H V ++G D D+
Sbjct: 179 KNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVF 238
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N LV YS D++ A VF ++ + W ISG AL L QM G
Sbjct: 239 TANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 212 FEPNSVTLASVLSACAQSGCLELG--EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
PN TL+S+L ACA +G ++H F+ + +G ALV MY K G L
Sbjct: 299 LVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDD 358
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A+ +F+ +P +++ WNA+ISG + G E+L LF ++ KE N T VL +
Sbjct: 359 ARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKS 415
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
Query: 8 LRQPPLPIP-PLSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
LR+ P P LS L + C S+ Q KQ+HA +I + D FA + L+ + G
Sbjct: 499 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVY--TYAKCG 556
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+ A F+ + W+ +I A + +A+ ++ M APN T T VL
Sbjct: 557 SIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLC 616
Query: 124 ACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
AC++ ++ K + + + G+D +C++ + L++A ++ + +
Sbjct: 617 ACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 670
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 225/403 (55%), Gaps = 35/403 (8%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFV 121
G + A LF S+ + WN +I + KA+ L+ M + AP++ T T V
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE------ 175
L AC+N+ ++ KQ+H ++ ++ + + V N L+ Y+ S + NAR++ D+
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 363
Query: 176 ---------------------------IRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ NR + WT MI GY Q+ R +EA+ LF M+
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G EPNS TLA+VLS CA CL+ G+++H E + + A++ MY ++G+
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFP 483
Query: 269 KAKALFDSMPERN-IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +FD + R TW +MI LA HG EEA+ LF ++ + + P+ IT+VGVLSAC
Sbjct: 484 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 543
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAGF++ G++ + +K + I P++ HY CMVDLL R G EA+E I+RM +PD +
Sbjct: 544 SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA 603
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
WG+LL+AC+ H N E+AE +++++++PNN G Y ++N+Y+
Sbjct: 604 WGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 646
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 204/497 (41%), Gaps = 103/497 (20%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSS--SGDLSYATRLFNSI--QSPNHFMWNTLI 87
+ IHA+ + + + + + LL++ ++ +G L A RLF+ I N F WN+L+
Sbjct: 46 RAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLL 105
Query: 88 R--AQASSLNPDKAIFLYM-----------------------------NMRRTGFAPNQH 116
A++ L + +F M +M GF P Q
Sbjct: 106 SMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 165
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T T VL +C+ ++ +++H+ V K GL + V N ++ Y D A VF+ +
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERM 225
Query: 177 RNRTLNVWTTMIS-------------------------------GYAQSFRANEALMLFD 205
R+++ W M+S GY Q+ +AL LF
Sbjct: 226 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFS 285
Query: 206 QMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFV---------------------- 242
+ML E P+ T+ SVLSACA G + +G++VH ++
Sbjct: 286 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 345
Query: 243 -----------KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
+ ++ I TAL+ Y K G + A+ +F M R++ W AMI G
Sbjct: 346 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 405
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
+G +EA+DLFR + PN T VLS C +D G+QI R +E
Sbjct: 406 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSL-LER 464
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++ + R G A + ++ W+ + + W +++ A HG E A + +E+
Sbjct: 465 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524
Query: 412 I--ALEPNNHGVYVVLS 426
+ +EP+ VLS
Sbjct: 525 LRAGVEPDRITYVGVLS 541
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 169/412 (41%), Gaps = 104/412 (25%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD----LNNARQVF 173
+ +L+ C + + IH K+GL ++ N L+ Y ++ L +AR++F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 174 DEI----RN-----------------------------RTLNVWTTMISGYAQSFRANEA 200
DEI RN R WT M+ G ++ R EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ M +GF P TL +VLS+CA + +G KVH FV G + ++++M
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 261 YTKN-------------------------------GALAKAKALFDSMPERNIATWNAMI 289
Y K G + A++LF+SMP R+I +WNAMI
Sbjct: 209 YGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMI 268
Query: 290 SGLASHGHAEEALDLF-RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR--- 345
+G +G +AL LF R L + + P++ T VLSAC + G + +G+Q+ + R
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328
Query: 346 ------------VYGIEPKIEHYGCMVD---------------LLG--RCGKVLEAEELI 376
Y +E+ ++D L G + G + A E+
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL--EPNNHGVYVVLS 426
M DVV W A++ + +G + A + + +I EPN++ + VLS
Sbjct: 389 GVMN-NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 439
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 216/369 (58%), Gaps = 4/369 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR---RTGFAPNQHTFTFVLKA 124
A +F + + W++++ A + K + LY M+ + F + ++ ++ +
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
CS + L + H + K + V N L+ Y + + AR++F ++ + + W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+ +IS Y+ + +AL+L+DQML EG +PNS TL SV+S+CA LE GE +H VK
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKD 549
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G E + TALV MY K G L A+ +FDSM ER++ TWN MISG HG A +AL L
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKL 609
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +E+ + PN +TF+ +LSACCHAG +D GR++F M+ Y +EP ++HY CMVDLLG
Sbjct: 610 FSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLG 668
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+ G + EAE+++ M +PD +WG LL ACK H N E+ RV K+ A +P N G Y++
Sbjct: 669 KSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYIL 728
Query: 425 LSNMYAEAE 433
+SN Y AE
Sbjct: 729 MSNSYGSAE 737
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 164/328 (50%), Gaps = 12/328 (3%)
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F+WN+L+R++ + + + + MR +G P++ T V A + + +L +
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 138 HTHVSKSGL---DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
H + + GL D + V + LV Y+ + +A ++FDE+ R + WT +ISG +
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 195 FRANEALMLFDQMLME----GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
+ E L +M+ G PNS T+ S L AC G L +G +H F G
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+ ++L MYTK + A+ LF +PE+++ +W ++I GHAE+A++LF +E+
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ P+++ +L+ + + G+ ++ +R +G I + ++ + +C K
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGN--ALISMYAKC-KQ 366
Query: 370 LEAEELIKRMVWKPDVVMWGALLAA-CK 396
++ + RM+ + D W +++ A CK
Sbjct: 367 VDIAATVFRMLHQRDTDSWSSMVVAYCK 394
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 179/375 (47%), Gaps = 13/375 (3%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT----GFAPNQHTF 118
G + A RLF+ + + W +I + + + + M R+ G PN T
Sbjct: 159 GSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTM 218
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
L+AC + L+ +H K+G+ VV+ L Y+ +AR +F E+
Sbjct: 219 ESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE 278
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ L WT++I Y ++ A +A+ LF M G +P+ V ++ +L+ + G+
Sbjct: 279 KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTF 338
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + R F ++G AL+ MY K + A +F + +R+ +W++M+ G
Sbjct: 339 HAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLD 398
Query: 299 EEALDLFRKL---EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIE 354
+ L+L+R++ +K++ + + + ++S+C G + +G+ S+K + G +
Sbjct: 399 LKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVA 458
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-- 412
+ ++ + GRCG A ++ MV DVV W AL+++ + G+ + A + +++
Sbjct: 459 N--ALISMYGRCGNFDVARKIFG-MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTE 515
Query: 413 ALEPNNHGVYVVLSN 427
++PN+ + V+S+
Sbjct: 516 GVKPNSATLVSVISS 530
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 38/294 (12%)
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+W +++ ++ L +M G P+ T V SA A+ G L +G VH +
Sbjct: 74 LWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYS 133
Query: 243 KMRGFEMG---AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
G G + ++LV+MY + G++ A LFD MPER++ W A+ISG +G
Sbjct: 134 VRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCG 193
Query: 300 EALDLFRKLEKEQ----IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
E L ++ + PN T L AC G + VG + G +G++ + H
Sbjct: 194 EGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHG-----FGVKAGVGH 248
Query: 356 YGCMVDLL----GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+V L +C +A L + K D+V W +L+ A G+ AE+ V+
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEK-DLVSWTSLIGAYCRAGH---AEKAVELF 304
Query: 412 IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDFES 465
+ +E + +Q + +++ L AGL + A + F +
Sbjct: 305 LGMEESG------------------LQPDEVVISCLLAGLGNDAKVRGGKTFHA 340
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/432 (38%), Positives = 246/432 (56%), Gaps = 21/432 (4%)
Query: 32 KQIHAQMIISSRI-QDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
+Q+H I S D F+AS LL + S D A + F+ I SPN +I A
Sbjct: 109 RQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPID---ARKAFDEIPSPN----PVIITA 161
Query: 90 QASS------LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
AS + P A+F + + A ++ A + + +H V K
Sbjct: 162 MASGYVRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVK 221
Query: 144 SGLDLDLHVVNCLVRCYSVSS--DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+GLD D VVN ++ Y+ DL AR+VFD + ++ W +MI+ YAQ+ + +AL
Sbjct: 222 TGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTMEKDVVS-WNSMIALYAQNGMSADAL 280
Query: 202 MLFDQML--MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
L+ +ML + N+VTL+++L ACA +G ++ G+ +H V G E +GT++V
Sbjct: 281 GLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVD 340
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY+K G + A+ F + E+NI +W+AMI+G HGH +EALD+F ++ + PN IT
Sbjct: 341 MYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYIT 400
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+ VL+AC HAG +D GR + +MK+ +GIEP +EHYGCMVDLLGR G + EA LIK M
Sbjct: 401 FISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEM 460
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQL 439
KPD +WGALL+AC+ H N+E+AE K + L+ N G YV+LSN+YAEA M +
Sbjct: 461 KVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEA-GMWKDV 519
Query: 440 EILLVQVLFAGL 451
E + V V G+
Sbjct: 520 ERMRVLVKTRGI 531
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 225/406 (55%), Gaps = 33/406 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ +G + A LF+ I + W T+I +A+ +Y M +TG PN+
Sbjct: 262 AKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIV 321
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLD------------------LDLHVV-------- 153
++ AC ++ Q+H V K G D +DL +
Sbjct: 322 NLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKD 381
Query: 154 -----NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
N L + + +++A + FD++ R + W+TMISGYAQS AL LF +ML
Sbjct: 382 HLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKML 441
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G +PN VT+ SV SA A G L+ G+ H +++ L AL+ MY K G++
Sbjct: 442 AGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSIN 501
Query: 269 KAKALFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A F+ + + +++ WNA+I GLASHGHA L++F +++ I PN ITF+GVLSA
Sbjct: 502 SALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSA 561
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCHAG ++ G++IF +MK Y +EP I+HYGCM+D+LGR G + EAEE+I+ M + D+V
Sbjct: 562 CCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIV 621
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG LLAAC+ HGN+ + ER + + L P++ G V+LSN+YA A
Sbjct: 622 IWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANA 667
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 133/555 (23%), Positives = 225/555 (40%), Gaps = 112/555 (20%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
+G + A +LF+ + + + T+I + +A+ ++ +MR G PN T V
Sbjct: 132 NGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNV 191
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
+ ACS++ + C+ +H V K + + V L+ Y + S + AR++FDE+ R L
Sbjct: 192 ISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNL 251
Query: 182 ---NV----------------------------WTTMISGYAQSFRANEALMLFDQMLME 210
NV W TMI GY Q R EAL ++ ML
Sbjct: 252 VTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQT 311
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT-------- 262
G PN V + +++SAC + + G ++H V RGF+ + T +++ Y
Sbjct: 312 GHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLA 371
Query: 263 -----------------------KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
KNG + A FD M R++ +W+ MISG A H +
Sbjct: 372 CLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPK 431
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
AL+LF K+ I PN++T V V SA G + G+ M R I +
Sbjct: 432 MALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYM-RSESIPFNDNLRAAL 490
Query: 360 VDLLGRCGKV------------------------------------LEAEELIKRMVWKP 383
+D+ +CG + LE ++R KP
Sbjct: 491 IDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKP 550
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIA---LEPN--NHGVYVVL---SNMYAEAE-- 433
+ + + +L+AC + G +E +R+ K + + +EP+ ++G + + + + EAE
Sbjct: 551 NPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEM 610
Query: 434 --SMKMQLEILLVQVLFAGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPG-W 490
SM M+ +I++ L A + ++ L P+ VLL+ G W
Sbjct: 611 IRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKW 670
Query: 491 TFEGTVQYVTASQTI 505
V+ V QT+
Sbjct: 671 EEVSFVRSVMQGQTM 685
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 184/417 (44%), Gaps = 80/417 (19%)
Query: 95 NPDKAIFLYMNMRRTGFAPNQH----TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
NP I ++ N R N H LK+CS++ ++ +QIH+ + K GL +
Sbjct: 32 NPQHFIHIFTNARNH---QNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNT 88
Query: 151 HVVNCLVRCYSVSSDL-------------------------------NNARQVFDEIRNR 179
+ N L+ Y+ D+ +NAR++FD + N+
Sbjct: 89 FIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNK 148
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+TTMI G+ Q+ EAL +F M G PN +TL +V+SAC+ G + VH
Sbjct: 149 GCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVH 208
Query: 240 -VFVKMRGFEMG-AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+ VKM F +G I+ T L+H Y + +A+ LFD MPERN+ TWN M++G A G
Sbjct: 209 GLVVKM--FVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGL 266
Query: 298 AEEALDLFRKLEKEQIV-------------------------------PNDITFVGVLSA 326
+EA +LF + + ++ PN++ V ++SA
Sbjct: 267 VDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSA 326
Query: 327 CCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
C I G Q+ G+ +KR + I+ ++ CG +++ L + K +
Sbjct: 327 CGRGTAIVDGWQLHGTVVKRGFDCYNFIQ--TTIIYFYAACG-MMDLACLQFEVGVKDHL 383
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
W AL A +G ++ A +K + + + + + YA++E KM LE+
Sbjct: 384 ESWNALTAGFIKNGMMDHA---LKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELF 437
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 224/406 (55%), Gaps = 33/406 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S +G + A +F I + + W T+I ++A+ +Y +M G+ PN
Sbjct: 275 SKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMV 334
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA---------- 169
++ C ++ +Q+ + V K G D + + ++ Y+ +N A
Sbjct: 335 DLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKE 394
Query: 170 ---------------------RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++F+E+ R + W+TMISGY Q+ + N AL LF +M+
Sbjct: 395 NVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMV 454
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G +PN VT+ SVLSA A SG L+ G H +V + L A++ MY K G++
Sbjct: 455 ASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSIN 514
Query: 269 KAKALFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A +F + E+ ++ WNA+I GLA HGHA +L +F LE+ I N ITF+GVL+A
Sbjct: 515 NALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTA 574
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCH G ++ G++ F SMK + I+P I+HYGCMVDLLGR G++ EAEE+I+ M K DVV
Sbjct: 575 CCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVV 634
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG LLAAC+ HGN++V ER + + LEP++ V+LSNMYA+A
Sbjct: 635 IWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADA 680
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 181/413 (43%), Gaps = 64/413 (15%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
SG L YA LF+ + + T+I + + ++A+ L+ MR G PN+ T +
Sbjct: 145 SGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATL 204
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
+ A S+ + C+ +H V K + + V L+R Y V S L AR +FDE+ + +
Sbjct: 205 VSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNI 264
Query: 182 NVWTTMISGYAQS-------------------------------FRANEALMLFDQMLME 210
W M++GY+++ R NEALM++ M+
Sbjct: 265 VSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISA 324
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM---------- 260
G+EPN V + ++S C ++ + G+++ V GF+ + + ++H+
Sbjct: 325 GWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEA 384
Query: 261 ---------------------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
Y +N + +A LF+ MPER++ +W+ MISG +
Sbjct: 385 CLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPN 444
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
AL+LF K+ I PN++T V VLSA +G + GR + I +
Sbjct: 445 LALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHN-NSITVSDNLSAAI 503
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVM-WGALLAACKNHGNIEVAERVVKEI 411
+D+ +CG + A E+ + K V W A++ HG+ ++ ++ ++
Sbjct: 504 IDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDL 556
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 184/421 (43%), Gaps = 91/421 (21%)
Query: 76 QSPNHFMWNTLIRAQASSL------------------NPDKAIFLYMNMR---RTGFAPN 114
+SP HF+ + ASSL NP FL++N +TG
Sbjct: 8 KSPLHFLITSPFSYPASSLKWVSTEILKIPQIFQQQENP----FLHLNSLLNPKTGQRHF 63
Query: 115 QHTFTFV--LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV----RC--------- 159
+ V LK CS+ L+ KQIH VSKSGL + + N L+ +C
Sbjct: 64 NYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSI 123
Query: 160 ------------------YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
Y S L+ A ++FDE+ + +TTMI G++Q+ N+A+
Sbjct: 124 FDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAV 183
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
LF QM G PN VT+A+++SA + G + +H V FE ++ T L+ MY
Sbjct: 184 ELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMY 243
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV------- 314
+L +A+ALFD MPE+NI +WN M++G + G + A +F ++ + +V
Sbjct: 244 CVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIID 303
Query: 315 ------------------------PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
PND+ V ++S C + G+Q+ ++ ++ G +
Sbjct: 304 GYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKM-GFD 362
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
++ L CG++ EA L R+ K +V W AL+A + I+ A + E
Sbjct: 363 CYDFIQSTIIHLYAACGRINEA-CLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNE 421
Query: 411 I 411
+
Sbjct: 422 M 422
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 216/371 (58%), Gaps = 2/371 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L+ A +F + + WN++I A A+ L+ M +G P+ T +
Sbjct: 217 GMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLA 276
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDL-DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
A + K +H +V + G D+ D+ N +V Y+ S ++ A++VFD + +R +
Sbjct: 277 SAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDV 336
Query: 182 NVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W T+I+GY Q+ ANEA+ +++ M EG +P T SVL A + G L+ G ++H
Sbjct: 337 VSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHA 396
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
G + + T L+ +Y K G L +A LF+ MP R+ WNA+I+GL HGH +
Sbjct: 397 LSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAK 456
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL LF ++++E+I P+ +TFV +L+AC HAG +D GR F M+ VYGI P +HY CMV
Sbjct: 457 ALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMV 516
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
D+LGR G++ EA E I+ M KPD +WGALL AC+ HGN+E+ + + + L+P N G
Sbjct: 517 DMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVG 576
Query: 421 VYVVLSNMYAE 431
YV++SNMYA+
Sbjct: 577 YYVLMSNMYAK 587
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 191/397 (48%), Gaps = 12/397 (3%)
Query: 8 LRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
LR PPL A S QL HA + + + AS L L G ++
Sbjct: 65 LRPDSFTFPPLVRAAPGPASAAQL---HACALRLGLLHPNVFASGSLVHAYLRF-GRVAE 120
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A R+F+ + + WN ++ + A+ L M G A + T + VL C
Sbjct: 121 AYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVV 180
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ +H + K GL +L V N L+ Y L A VF + R L W ++
Sbjct: 181 LGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSI 240
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK-VHVFVKMRG 246
IS Q + A+ LF M+ G P+ +TL S+ SA AQ G ELG K VH +V+ RG
Sbjct: 241 ISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGD-ELGAKSVHCYVRRRG 299
Query: 247 FEMGAIL-GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
+++G I+ G A+V MY K + A+ +FD++P+R++ +WN +I+G +G A EA+ ++
Sbjct: 300 WDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIY 359
Query: 306 RKLEK-EQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLL 363
+ E + P TFV VL A + G + G ++ S+K G+ + C++DL
Sbjct: 360 NDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKT--GLNLDVYVTTCLIDLY 417
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+CGK++EA L + M + W A++A HG+
Sbjct: 418 AKCGKLVEAMFLFEHMP-RRSTGPWNAIIAGLGVHGH 453
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 5/300 (1%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQ 171
P+ TF +++A S Q+H + GL ++ LV Y + A +
Sbjct: 67 PDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFDE+ R + W M+SG ++ RA +A+ L +M+ EG ++VTL+SVL C G
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L +HV+ G + AL+ +Y K G L +A +F M R++ TWN++IS
Sbjct: 184 RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA 243
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
G A++LF + + + P+ +T V + SA G + + ++R
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVG 303
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
I MVD+ + K+ A+++ + + DVV W L+ +G A R+ ++
Sbjct: 304 DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDR-DVVSWNTLITGYMQNGLANEAIRIYNDM 362
>gi|125542569|gb|EAY88708.1| hypothetical protein OsI_10183 [Oryza sativa Indica Group]
Length = 510
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/485 (37%), Positives = 262/485 (54%), Gaps = 57/485 (11%)
Query: 11 PPLP-IPPLSLL--ADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA----FCALSSSG 63
PP P I P L+ A KC + +L+ +H ++ + A LA F A+S +G
Sbjct: 3 PPSPSISPGDLVSFAGKCSTKRKLRLLHGALLRRRHLLPAADAVAALAKLLRFAAVSPAG 62
Query: 64 DLSYATRLFN-------SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
DL +A L + S S F +NTL+R A+S +P AI L+ MRR G AP+
Sbjct: 63 DLRHAAALLSLHLPFLSSASSHLAFFYNTLMRGLAASSSPAAAIELFAAMRRAGAAPDAF 122
Query: 117 TFTFVLKACSN-VRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVRCYSV--------- 162
TFTF LK+CS V +H K G +HV N L+ YS
Sbjct: 123 TFTFALKSCSRCVSQRRLPSDLHAQAIKHGCLGAGSSHVHVHNALLHGYSSRAAVGDARR 182
Query: 163 ----------------------SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
++DL+ AR VFD++ +R + WT MIS YA++ R EA
Sbjct: 183 VFDEMPARDVISFSGLLTLHLKANDLDAARVVFDQMPHRDVVSWTAMISAYARARRPREA 242
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L LFD M + +P+ VT+ SV+SAC G L GE+V +V GF L AL+ M
Sbjct: 243 LALFDAMPV---QPDEVTMLSVVSACTALGDLATGERVCQYVDSNGFGWMVSLRNALMDM 299
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EKEQIVPNDI 318
Y K G+L +A+ LFD M R++A+WN IS ASHG E + LF ++ + + + P+
Sbjct: 300 YAKCGSLTEARNLFDGMTVRSLASWNTFISAYASHGDVESTVALFHRMLADGKSVKPDGT 359
Query: 319 TFVGVLSACCHAGFIDVGRQIFGS-MKRVYG-IEPKIEHYGCMVDLLGRCGKVLEAEELI 376
T + VL+A H GF++ GR +F + + YG ++ IEHYGCMVDLLGR G++ EA ++I
Sbjct: 360 TLLAVLTAYAHKGFVEEGRAMFNAILSGNYGKVDLTIEHYGCMVDLLGRAGQLEEAYKMI 419
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
++M + V+WGALL AC+ HG+I +AER V+++ +L P G Y++LS+MYA +
Sbjct: 420 EQMPIPSNSVVWGALLGACRTHGDINMAERAVQKLRSLNPEEGGYYILLSDMYAASGRTT 479
Query: 437 MQLEI 441
+EI
Sbjct: 480 EAMEI 484
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 216/369 (58%), Gaps = 4/369 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR---RTGFAPNQHTFTFVLKA 124
A +F + + W++++ A + K + LY M+ + F + ++ ++ +
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
CS + L + H + K + V N L+ Y + + AR++F ++ + + W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+ +IS Y+ + +AL+L+DQML EG +PNS TL SV+S+CA LE GE +H VK
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKD 549
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G E + TALV MY K G L A+ +FDSM ER++ TWN MISG HG A +AL L
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKL 609
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +E+ + PN +TF+ +LSACCHAG +D GR++F M+ Y +EP ++HY CMVDLLG
Sbjct: 610 FSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLG 668
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+ G + EAE+++ M +PD +WG LL ACK H N E+ RV K+ A +P N G Y++
Sbjct: 669 KSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYIL 728
Query: 425 LSNMYAEAE 433
+SN Y AE
Sbjct: 729 MSNSYGSAE 737
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 164/328 (50%), Gaps = 12/328 (3%)
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F+WN+L+R++ + + + + MR +G P++ T V A + + +L +
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 138 HTHVSKSGL---DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
H + + GL D + V + LV Y+ + +A ++FDE+ R + WT +ISG +
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 195 FRANEALMLFDQMLME----GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
+ E L +M+ G PNS T+ S L AC G L +G +H F G
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+ ++L MYTK + A+ LF +PE+++ +W ++I GHAE+A++LF +E+
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ P+++ +L+ + + G+ ++ +R +G I + ++ + +C +V
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGN--ALISMYAKCKQV 367
Query: 370 LEAEELIKRMVWKPDVVMWGALLAA-CK 396
+ + RM+ + D W +++ A CK
Sbjct: 368 -DIAATVFRMLHQRDTDSWSSMVVAYCK 394
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 179/375 (47%), Gaps = 13/375 (3%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT----GFAPNQHTF 118
G + A RLF+ + + W +I + + + + M R+ G PN T
Sbjct: 159 GSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTM 218
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
L+AC + L+ +H K+G+ VV+ L Y+ +AR +F E+
Sbjct: 219 ESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE 278
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ L WT++I Y ++ A +A+ LF M G +P+ V ++ +L+ + G+
Sbjct: 279 KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTF 338
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + R F ++G AL+ MY K + A +F + +R+ +W++M+ G
Sbjct: 339 HAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLD 398
Query: 299 EEALDLFRKLE---KEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIE 354
+ L+L+R+++ K++ + + + ++S+C G + +G+ S+K + G +
Sbjct: 399 LKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVA 458
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-- 412
+ ++ + GRCG A ++ MV DVV W AL+++ + G+ + A + +++
Sbjct: 459 N--ALISMYGRCGNFDVARKIFG-MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTE 515
Query: 413 ALEPNNHGVYVVLSN 427
++PN+ + V+S+
Sbjct: 516 GVKPNSATLVSVISS 530
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 38/294 (12%)
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+W +++ ++ L +M G P+ T V SA A+ G L +G VH +
Sbjct: 74 LWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYS 133
Query: 243 KMRGFEMG---AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
G G + ++LV+MY + G++ A LFD MPER++ W A+ISG +G
Sbjct: 134 VRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCG 193
Query: 300 EALDLFRKLEKEQ----IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
E L ++ + PN T L AC G + VG + G +G++ + H
Sbjct: 194 EGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHG-----FGVKAGVGH 248
Query: 356 YGCMVDLL----GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+V L +C +A L + K D+V W +L+ A G+ AE+ V+
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEK-DLVSWTSLIGAYCRAGH---AEKAVELF 304
Query: 412 IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDFES 465
+ +E + +Q + +++ L AGL + A + F +
Sbjct: 305 LGMEESG------------------LQPDEVVISCLLAGLGNDAKVRGGKTFHA 340
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 241/432 (55%), Gaps = 46/432 (10%)
Query: 48 FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR 107
FA L + SS+ L A +F IQSP+ +WN +IRA A S P K+I + M
Sbjct: 59 FALGDFLPSGSNSSAHHLLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQML 118
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL--------------------- 146
T P+ HT++F+L AC++ SL +Q+H+ V +G
Sbjct: 119 LTDSRPDAHTYSFLLAACTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGG 178
Query: 147 -------------DLDLHVVNC---LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
D+ V C ++ Y +L+ AR++F E+ R + WTTMISG
Sbjct: 179 EGAALASARKVFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISG 238
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK--MRGFE 248
YA++ + +AL LFDQM G E + V L + L+ACA+ G L++G +H +++ G
Sbjct: 239 YAKNGKCKQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSN 298
Query: 249 MGAI--LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
+ L AL+HMY G + +A +F MPER+ +W ++I+ A G+A+ L++FR
Sbjct: 299 QRVLVSLNNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFR 358
Query: 307 KLEK---EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
+++ + P+ ITF+GVL AC HAG +D GRQ+F M + +GI+P+IEHYGCMVDLL
Sbjct: 359 SMQRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLL 418
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL-EPNNHGVY 422
R G + EA+ELI M KP+ +WGALL C+ + N E+A V ++++A +P+ Y
Sbjct: 419 SRAGFLDEAQELIATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGY 478
Query: 423 V-VLSNMYAEAE 433
+ +L+ +YA AE
Sbjct: 479 LSLLAQVYASAE 490
>gi|242058803|ref|XP_002458547.1| hypothetical protein SORBIDRAFT_03g035530 [Sorghum bicolor]
gi|241930522|gb|EES03667.1| hypothetical protein SORBIDRAFT_03g035530 [Sorghum bicolor]
Length = 483
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 225/380 (59%), Gaps = 10/380 (2%)
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA--QASSLNPDKAIFLYMNMRRTGFAP 113
F A L A LF S+ P+ F++N+L+R+ A + +P + L+ + G P
Sbjct: 63 FLACGRLRSLDPALVLFASLPRPHVFVFNSLLRSLPAAPACSP---LPLFRHFIGLGVRP 119
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV-SSDLNNARQV 172
N++TF +L + S++ L+ +H+ V+KSG DLHV N L+ Y+ DL +A Q+
Sbjct: 120 NRYTFPLMLTSLSSLHELSA---VHSQVAKSGFARDLHVRNALLASYAACDPDLGHAEQL 176
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FDE+ + + WTTMI+ Y R+ AL F +M PN VT+ S L ACA G +
Sbjct: 177 FDEMPSPDVVAWTTMITAYRNRGRSFHALSTFRRMFAASVAPNRVTMVSALGACAAHGAV 236
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+ G +H +V+ +G+E+ +LGTALV MY K G + + +F M ERN+ TWN++I
Sbjct: 237 DTGIWIHQYVQKQGWELDVVLGTALVDMYGKCGHVVEGVRVFSEMTERNVCTWNSIIGAF 296
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEP 351
A + E AL F +++ + + P+ +T + VL AC HAG +D+GR+IF + + YG +P
Sbjct: 297 ALEQNGEMALRWFYRMKADGVRPDAVTLICVLYACTHAGLVDIGRKIFNLIVQGKYGFQP 356
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
I+H+GCM+DLL R G + +A +++ M +PD V+WG LL CK G+ +++E V +
Sbjct: 357 GIKHFGCMIDLLSRSGHLDDAFRVLEAMPSQPDAVIWGLLLQGCKVRGDTDLSEYVTMRL 416
Query: 412 IALEPNNHGVYVVLSNMYAE 431
+ LEP N YV L+N+YAE
Sbjct: 417 VELEPGNASHYVTLANLYAE 436
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 164/363 (45%), Gaps = 41/363 (11%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
L+ S+H+L +H+Q+ S +D + LLA A + DL +A +LF+ + SP+
Sbjct: 126 LMLTSLSSLHELSAVHSQVAKSGFARDLHVRNALLASYA-ACDPDLGHAEQLFDEMPSPD 184
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
W T+I A + A+ + M APN+ T L AC+ +++ IH
Sbjct: 185 VVAWTTMITAYRNRGRSFHALSTFRRMFAASVAPNRVTMVSALGACAAHGAVDTGIWIHQ 244
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+V K G +LD+ + LV Y + +VF E+ R + W ++I +A
Sbjct: 245 YVQKQGWELDVVLGTALVDMYGKCGHVVEGVRVFSEMTERNVCTWNSIIGAFALEQNGEM 304
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV-HVFVKMR-GFEMGAILGTAL 257
AL F +M +G P++VTL VL AC +G +++G K+ ++ V+ + GF+ G
Sbjct: 305 ALRWFYRMKADGVRPDAVTLICVLYACTHAGLVDIGRKIFNLIVQGKYGFQPG------- 357
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
I + MI L+ GH ++A FR LE P+
Sbjct: 358 ------------------------IKHFGCMIDLLSRSGHLDDA---FRVLEAMPSQPDA 390
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP-KIEHYGCMVDLLGRCGKVLEAEELI 376
+ + +L C G D+ + R+ +EP HY + +L G+ LEAEE++
Sbjct: 391 VIWGLLLQGCKVRGDTDLSEYV---TMRLVELEPGNASHYVTLANLYAETGRWLEAEEVL 447
Query: 377 KRM 379
K M
Sbjct: 448 KGM 450
>gi|225435933|ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 229/404 (56%), Gaps = 4/404 (0%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLS-YATRLFNSIQSPNHFMWNTLIR 88
L+ +HA+++ +S + +S+LL S G LS ++ +F + N + WN +I
Sbjct: 26 HLRHLHARLLRTSLYDNVILSSKLLLM--YSQLGKLSPHSLSVFLHMPHRNIYSWNIIIG 83
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+ S P K+I L++ MR P+ T VL+AC+ S+ +H + G++
Sbjct: 84 EFSRSHLPHKSIDLFLQMRHFNQPPDVFTLPLVLRACAASGSVKLGVSVHGLCVEMGMEK 143
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
L V + LV Y + +AR +FDE+ R +WT M++GYAQ AL +F QM+
Sbjct: 144 SLFVASALVFMYVTFGKVLDARVLFDEMPERDAVLWTAMLAGYAQHEEPMLALSVFRQMV 203
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G + V + S+L AC Q G L+ G+ VH ++ R +G LG ALV+ Y K AL
Sbjct: 204 SAGVALDGVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYVKCAALG 263
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+ LFD MPER++ +W+++I G G+ + ALDLF ++ + PND+TF+G LSAC
Sbjct: 264 YSYNLFDKMPERDVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVTFLGALSACT 323
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G ++ F MK YG+ P+++HY CMVD LGR G + +AE I+ M + D +
Sbjct: 324 HTGMVERAHTYFEMMKE-YGVAPELKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAVL 382
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
GALL C+ HGN EV ERV K+++ LEP YV+L+N+YA A
Sbjct: 383 GALLGGCRVHGNAEVGERVAKKLMGLEPEKASNYVMLANIYAGA 426
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 216/369 (58%), Gaps = 4/369 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR---RTGFAPNQHTFTFVLKA 124
A +F + + W++++ A + K + LY M+ + F + ++ ++ +
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISS 429
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
CS + L + H + K + V N L+ Y + + AR++F ++ + + W
Sbjct: 430 CSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTW 489
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+ +IS Y+ + +AL+L+DQML EG +PNS TL SV+S+CA LE GE +H VK
Sbjct: 490 SALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKD 549
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G E + TALV MY K G L A+ +FDSM ER++ TWN MISG HG A +AL L
Sbjct: 550 VGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKL 609
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +E+ + PN +TF+ +LSACCHAG +D GR++F M+ Y +EP ++HY CMVDLLG
Sbjct: 610 FSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLG 668
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+ G + EAE+++ M +PD +WG LL ACK H N E+ RV K+ A +P N G Y++
Sbjct: 669 KSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYIL 728
Query: 425 LSNMYAEAE 433
+SN Y AE
Sbjct: 729 MSNSYGSAE 737
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 164/328 (50%), Gaps = 12/328 (3%)
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ F+WN+L+R++ + + + + MR +G P++ T V A + + +L +
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 138 HTHVSKSGL---DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
H + + GL D + V + LV Y+ + +A ++FDE+ R + WT +ISG +
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCN 189
Query: 195 FRANEALMLFDQMLME----GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
+ E L +M+ G PNS T+ S L AC G L +G +H F G
Sbjct: 190 GQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHC 249
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+ ++L MYTK + A+ LF +PE+++ +W ++I GHAE+A++LF +E+
Sbjct: 250 PSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ P+++ +L+ + + G+ ++ +R +G I + ++ + +C +V
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGN--ALISMYAKCKQV 367
Query: 370 LEAEELIKRMVWKPDVVMWGALLAA-CK 396
+ + RM+ + D W +++ A CK
Sbjct: 368 -DIAATVFRMLHQRDTDSWSSMVVAYCK 394
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 179/375 (47%), Gaps = 13/375 (3%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT----GFAPNQHTF 118
G + A RLF+ + + W +I + + + + M R+ G PN T
Sbjct: 159 GSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTM 218
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
L+AC + L+ +H K+G+ VV+ L Y+ +AR +F E+
Sbjct: 219 ESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE 278
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ L WT++I Y ++ A +A+ LF M G +P+ V ++ +L+ + G+
Sbjct: 279 KDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTF 338
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + R F ++G AL+ MY K + A +F + +R+ +W++M+ G
Sbjct: 339 HAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLD 398
Query: 299 EEALDLFRKLE---KEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIE 354
+ L+L+R+++ K++ + + + ++S+C G + +G+ S+K + G +
Sbjct: 399 LKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVA 458
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-- 412
+ ++ + GRCG A ++ MV DVV W AL+++ + G+ + A + +++
Sbjct: 459 N--ALISMYGRCGNFDVARKIFG-MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTE 515
Query: 413 ALEPNNHGVYVVLSN 427
++PN+ + V+S+
Sbjct: 516 GVKPNSATLVSVISS 530
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 38/294 (12%)
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+W +++ ++ L +M G P+ T V SA A+ G L +G VH +
Sbjct: 74 LWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYS 133
Query: 243 KMRGFEMG---AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
G G + ++LV+MY + G++ A LFD MPER++ W A+ISG +G
Sbjct: 134 VRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCG 193
Query: 300 EALDLFRKLEKEQ----IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
E L ++ + PN T L AC G + VG + G +G++ + H
Sbjct: 194 EGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHG-----FGVKAGVGH 248
Query: 356 YGCMVDLL----GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+V L +C +A L + K D+V W +L+ A G+ AE+ V+
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEK-DLVSWTSLIGAYCRAGH---AEKAVELF 304
Query: 412 IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDFES 465
+ +E + +Q + +++ L AGL + A + F +
Sbjct: 305 LGMEESG------------------LQPDEVVISCLLAGLGNDAKVRGGKTFHA 340
>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Glycine max]
Length = 750
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 232/419 (55%), Gaps = 14/419 (3%)
Query: 30 QLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
Q K H +I + D S L +C G LS A R+F Q WN ++
Sbjct: 324 QGKAFHGVIIRRYYVDDEKVNDSLLFMYCKF---GMLSLAERIFPLCQGSGD-GWNFMVF 379
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD- 147
K + L+ M+ G + +C+ + ++N + IH +V K LD
Sbjct: 380 GYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDG 439
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
++ V N LV Y + A ++F+ ++ W T+IS + + EA+ LF +M
Sbjct: 440 KNISVTNSLVEMYGKCGKMTFAWRIFNTSETDVVS-WNTLISSHVHIKQHEEAVNLFSKM 498
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+ E +PN+ TL VLSAC+ LE GE+VH ++ GF + LGTAL+ MY K G L
Sbjct: 499 VREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQL 558
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
K++ +FDSM E+++ WNAMISG +G+AE AL++F+ +E+ ++PN ITF+ +LSAC
Sbjct: 559 QKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSAC 618
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAG ++ G+ +F MK Y + P ++HY CMVDLLGR G V EAE ++ M PD +
Sbjct: 619 AHAGLVEEGKYMFARMKS-YSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGV 677
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
WGALL CK H IE+ R+ K I LEP N G Y++++NMY+ EAE+++ ++
Sbjct: 678 WGALLGHCKTHNQIEMGIRIAKYAIDLEPENDGYYIIMANMYSFIGRWEEAENVRRTMK 736
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 207/468 (44%), Gaps = 55/468 (11%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L++ +++ L + HA + S + F AS+L++ S + D S + LF+S+ S
Sbjct: 10 LILVSKHIRTLDSLLRFHALTVTSGHSTNLFMASKLISLYD-SLNNDPSSCSTLFHSLPS 68
Query: 78 PNHFMWNTLIRAQAS-SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+ F++N+ +++ S SL P + + L+ +MR + +PN T V+ A +++ L
Sbjct: 69 KDTFLYNSFLKSLFSRSLFP-RVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGAS 127
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H SK+GL H V YS + AR+VFDEI R + WT +I G+ +
Sbjct: 128 LHALASKTGL---FHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGE 184
Query: 197 ANEALMLFDQ---MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ L ++ + +PN+ T AC G + G +H V G + + +
Sbjct: 185 PEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNG--VASFI 242
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
++++ MY+K G +A F + +++ W ++I A G E L LFR++++ +I
Sbjct: 243 QSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEI 302
Query: 314 VPNDITFVGVLSACCHAGF---IDV--GRQIFGSMKRVYGIEPKI--------------- 353
P+ GV+ C +GF +DV G+ G + R Y ++ +
Sbjct: 303 RPD-----GVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGML 357
Query: 354 --------------EHYGCMVDLLGRCGKVLEAEELIKRMVW---KPDVVMWGALLAACK 396
+ + MV G+ G+ ++ EL + M W + + + +A+C
Sbjct: 358 SLAERIFPLCQGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCA 417
Query: 397 NHGNIEVAERVVKEIIA--LEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
G + + + +I L+ N V L MY + M I
Sbjct: 418 QLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIF 465
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 169/374 (45%), Gaps = 14/374 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR---RTGFAPNQH 116
S G + A ++F+ I + W LI + P+K + ++ PN
Sbjct: 149 SRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHVHGVVEDDEKPNAK 208
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T+ AC N+ +++ +H V K+G+ + + ++ YS A + F E+
Sbjct: 209 TWEGGFLACGNLGAVSEGSCLHGVVVKNGVAS--FIQSSVLDMYSKCGVPREAYRSFCEV 266
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
++ L WT++I YA+ E L LF +M P+ V + VLS S + G+
Sbjct: 267 IHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGK 326
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
H + R + + +L+ MY K G L+ A+ +F + + + WN M+ G G
Sbjct: 327 AFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIF-PLCQGSGDGWNFMVFGYGKVG 385
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ ++LFR+++ I I +++C G +++GR I ++ + + I
Sbjct: 386 ENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVT 445
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA---CKNHGN-IEVAERVVKEII 412
+V++ G+CGK+ A + + DVV W L+++ K H + + ++V+E
Sbjct: 446 NSLVEMYGKCGKMTFAWRIFNTS--ETDVVSWNTLISSHVHIKQHEEAVNLFSKMVRE-- 501
Query: 413 ALEPNNHGVYVVLS 426
+PN + VVLS
Sbjct: 502 DQKPNTATLVVVLS 515
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 229/406 (56%), Gaps = 3/406 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
LKQ HA++++S ++L ++G SYA L S +P+ F++ +L RA
Sbjct: 23 LKQAHARLVVSGHGDSLPLITKLAT--LAVAAGAASYARLLAASHPAPDSFLFCSLTRAT 80
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A P A+ Y + + FT V KAC+++ ++ IH H GL +
Sbjct: 81 ARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGMGIHAHAVLLGLGSNR 140
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V LV YS L+ AR++FD IR++++ W MISGY Q+ A A+ ++ +M M
Sbjct: 141 FVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIEVYREMQMA 200
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G P+S T + LSACAQ+G L+LG +V + EM +LG ALV+MY + G + KA
Sbjct: 201 GEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYARCGLVNKA 260
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ F+ + ERN+ TW +MI+G HGH EA+ LF + ++ PND+TFV VLSAC HA
Sbjct: 261 REWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAVLSACAHA 320
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV-WKPDVVMWG 389
G + GR F SMK VYG+ P++EHY MVD+ GR G + +A I + +P +W
Sbjct: 321 GLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFIHDSIPGEPGPEVWT 380
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
A+L ACK H + + V + +IALEP + V+LSN+YA + M
Sbjct: 381 AMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYALSGKM 426
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 245/434 (56%), Gaps = 15/434 (3%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P I S L D + KQ H Q + D F +S L+ S+ G L A ++
Sbjct: 80 PCAIKACSSLLD----IFSGKQTHQQAFVFGYQSDIFVSSALIVM--YSTCGKLEDARKV 133
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF------TFVLKAC 125
F+ I N W ++IR + N A+ L+ ++ + F V+ AC
Sbjct: 134 FDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISAC 193
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD--LNNARQVFDEIRNRTLNV 183
S V + + IH+ V K G D + V N L+ Y+ + + AR++FD+I ++
Sbjct: 194 SRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS 253
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEP-NSVTLASVLSACAQSGCLELGEKVHVFV 242
+ +++S YAQS +NEA +F +++ E N +TL++VL A + SG L +G+ +H V
Sbjct: 254 YNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G E I+GT+++ MY K G + A+ FD M +N+ +W AMI+G HGHA +AL
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+LF + + PN ITFV VL+AC HAG DVG F +MK +G+EP +EHYGCMVDL
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G + +A +LI++M +PD ++W +LLAAC+ H N+E+AE V + L+P+N G Y
Sbjct: 434 LGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYY 493
Query: 423 VVLSNMYAEAESMK 436
++LS++YA++ K
Sbjct: 494 MLLSHIYADSGRWK 507
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 193/361 (53%), Gaps = 14/361 (3%)
Query: 69 TRLFNS-IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
T LFN + + F WN++I A S + +A+ + +MR+ P + +F +KACS+
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + KQ H G D+ V + L+ YS L +AR+VFDEI R + WT+M
Sbjct: 89 LLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEP------NSVTLASVLSACAQSGCLELGEKVHVF 241
I GY + A +A+ LF +L+E + +S+ + SV+SAC++ L E +H F
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSF 208
Query: 242 VKMRGFEMGAILGTALVHMYTK--NGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V RGF+ G +G L+ Y K G +A A+ +FD + +++ ++N+++S A G +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 300 EALDLFRKLEKEQIVP-NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EA D+FR+L KE++V N IT VL A H+G + +G+ I + R+ G+E +
Sbjct: 269 EAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTS 327
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEP 416
++D+ +CG+V A RM K +V W A++A HG+ A + +I + P
Sbjct: 328 IIDMYCKCGRVETARLAFDRMKNK-NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 417 N 417
N
Sbjct: 387 N 387
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 226/373 (60%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A + G L+ A ++F+ I WN LI A + +P KA+ L M +G P+ T
Sbjct: 394 AYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFT 453
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ +L AC++++SL K+IH +V ++GL+ D V L+ Y ++AR +FD ++
Sbjct: 454 ISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMK 513
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
++ L W MISGY+Q+ E+L LF + L EG + + + + SV AC+Q L LG++
Sbjct: 514 DKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKE 573
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
H +V A +G +++ MY K+G + +++ +FD + ++N+A+WNA+I HGH
Sbjct: 574 AHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGH 633
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EA++L+ +++K +P+ T++G+L AC HAG ++ G + F M+ IEPK+EHY
Sbjct: 634 GKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYA 693
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
C++D+L R G++ +A L+ M + D +W +LL +C+ G +E+ E+V K+++ LEP+
Sbjct: 694 CLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPD 753
Query: 418 NHGVYVVLSNMYA 430
YV+LSN+YA
Sbjct: 754 KAENYVLLSNLYA 766
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 182/357 (50%), Gaps = 11/357 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHT 117
S G L+ A F + N WNT+I A + + ++A L M+ G N+ T
Sbjct: 294 SKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVT 353
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
VL AC + L K++H + + + + N + Y+ LN+A +VF I
Sbjct: 354 ILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIG 412
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
++T++ W +I G+AQ+ +AL L QM G +P+ T++S+L ACA L+ G++
Sbjct: 413 DKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKE 472
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +V G E +GT+L+ Y G + A+ LFD M ++N+ +WNAMISG + +G
Sbjct: 473 IHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGL 532
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
E+L LFRK E I ++I V V AC + +G++ G + + E G
Sbjct: 533 PYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAF--VG 590
Query: 358 C-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVK 409
C ++D+ + G + E+ ++ + K +V W A++ A HG+ IE+ ER+ K
Sbjct: 591 CSIIDMYAKSGCIKESRKVFDGLKDK-NVASWNAIIVAHGIHGHGKEAIELYERMKK 646
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 162/301 (53%), Gaps = 7/301 (2%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC-LVRCYSVSSDLNNARQVF 173
+ +L+AC N + + +++H VS S + +V+N L++ Y++ ++R VF
Sbjct: 43 KEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVF 102
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCL 232
D + + L W ++SGY ++ + + +F ++ + F+P++ T SV+ AC +
Sbjct: 103 DNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDV 162
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
LGE +H V G + +G ALV MY K GA+ +A +FD MPE N+ +WN+MI
Sbjct: 163 RLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAF 222
Query: 293 ASHGHAEEALDLFRK-LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
+ +G + ++ DL + L +E ++P+ +T V +L C G +D+G I G ++ G+
Sbjct: 223 SENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKL-GLSE 281
Query: 352 KIEHYGCMVDLLGRCGKVLEAE-ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
++ MV + +CG + EA+ +K +VV W +++A G++ A +++E
Sbjct: 282 EVMVNNAMVYMYSKCGYLNEAQMSFVKNN--NKNVVSWNTMISAFSLEGDVNEAFNLLQE 339
Query: 411 I 411
+
Sbjct: 340 M 340
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 192/399 (48%), Gaps = 25/399 (6%)
Query: 16 PPLSLLADKC---KSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRL 71
+ LL C K + +++H + S+ + D+ +RL+ A+ S +RL
Sbjct: 44 EAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGS---PLDSRL 100
Query: 72 -FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVR 129
F+++++ N WN L+ + + ++M++ T F P+ TF V+KAC +
Sbjct: 101 VFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGIL 160
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+ + IH V K GL LD+ V N LV Y ++ A +VFD + L W +MI
Sbjct: 161 DVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMIC 220
Query: 190 GYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
++++ + ++ L +ML EG P+ VT+ ++L CA G +++G +H G
Sbjct: 221 AFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLS 280
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
++ A+V+MY+K G L +A+ F +N+ +WN MIS + G EA +L +++
Sbjct: 281 EEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEM 340
Query: 309 --EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK-----IEHYGCMVD 361
+ E++ N++T + VL AC + + S+K ++G + +E +
Sbjct: 341 QIQGEEMKANEVTILNVLPAC-------LDKLQLRSLKELHGYSFRHCFQHVELSNAFIL 393
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+CG + AE++ + V W AL+ +G+
Sbjct: 394 AYAKCGALNSAEKVF-HGIGDKTVSSWNALIGGHAQNGD 431
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 185/425 (43%), Gaps = 56/425 (13%)
Query: 7 SLRQPP-LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S +QP I L L KS+ K+IH ++ + D F + LL+ G
Sbjct: 445 SGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSH--YIHCGKA 502
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
S A LF+ ++ N WN +I + + P +++ L+ G ++ V AC
Sbjct: 503 SSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGAC 562
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S + +L K+ H +V K+ D V ++ Y+ S + +R+VFD ++++ + W
Sbjct: 563 SQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWN 622
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+I + EA+ L+++M G P+ T +L AC +G +E G K F +M+
Sbjct: 623 AIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLK--YFKEMQ 680
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
F ++ E + + +I LA G ++AL L
Sbjct: 681 NF----------------------------NLIEPKLEHYACLIDMLARAGRLDDALRLV 712
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP-KIEHYGCMVDL-- 362
++ +E ++ + +L +C G +++G ++ K++ +EP K E+Y + +L
Sbjct: 713 NEMPEE---ADNRIWSSLLRSCRTFGALEIGEKV---AKKLLELEPDKAENYVLLSNLYA 766
Query: 363 -LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNH 419
LG+ V +++K + + D A C IEV RV ++ +L+P +
Sbjct: 767 GLGKWDGVRRVRQMMKEIGLQKD--------AGCS---WIEVGGRVYSFVVGDSLQPKSA 815
Query: 420 GVYVV 424
+ V+
Sbjct: 816 EIRVI 820
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 221/375 (58%), Gaps = 2/375 (0%)
Query: 58 ALSSSGDLSYATRLFNSIQ-SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
++S +G S A R+F+ + S N N++IR +++++ M + P+
Sbjct: 32 SVSRNGFESIA-RIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSS 90
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
TF VLKA + + K IH V + G D++ LV Y +++A Q+FDE+
Sbjct: 91 TFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEM 150
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
R W +I+GY + + +A+ F ML +G +P+ T+ VLSAC+ G G+
Sbjct: 151 PERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGK 210
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H F+ + +GTAL+ MY K GA+ + + +F+ + E+N+ TWN +ISG A +G
Sbjct: 211 WIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNG 270
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ AL F ++ E P+++TF+GVL ACCH G + GR F SMK+ +G++P+IEHY
Sbjct: 271 QGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHY 330
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GCMVDLLGR G + EA ELI+ M +PD ++W ALL AC+ HGN ++ E ++K +I LEP
Sbjct: 331 GCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEP 390
Query: 417 NNHGVYVVLSNMYAE 431
NN YV+LSN+Y+
Sbjct: 391 NNGENYVLLSNIYSR 405
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 243/406 (59%), Gaps = 14/406 (3%)
Query: 46 DHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
D F ++RL+ A+ ALS+ L A ++F+ N F+WN +++A A + + ++A+
Sbjct: 283 DPFLSTRLIEAYAALSA---LPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339
Query: 105 NMRRTGFAPNQHTFTFVLKAC-----SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC 159
+M R G + +++ LKAC S++ + +++H H + G L HV L+ C
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399
Query: 160 YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE--PNSV 217
Y+ ++ A +VF + +R L W+ MI YA++ R +A+ +F +M+ + PNS+
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T+ SVL ACA L G+ +H ++ RGF++ + AL+ MY K G L + +F+ +
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519
Query: 278 -PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
RN+ +WN++ISG HG E+L +F ++ +E I PN ITFV VL AC H G ++ G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
+++F SM Y + P+ EHY CMVDLLGR G++ EA ELI+ M +P +WG+LL AC+
Sbjct: 580 KKLFESMVE-YNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACR 638
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
HG++E AE + LEP N G YV+L+++YA A+ ++ Q+++L
Sbjct: 639 IHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAK-LQNQVDVL 683
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 208 LMEGFE-PNSVTLASVLSACAQSGCLELGEKVHVFVKMRG-FEMGAILGTALVHMYTKNG 265
L++G P T S+L A A++ L VH ++ F L T L+ Y
Sbjct: 239 LLQGLPAPTQRTYESLLLAAARARDTALAAAVHRRLEADPVFRSDPFLSTRLIEAYAALS 298
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
AL A+ +FD P +NI WNAM+ LA H EEAL + + + + ++ L
Sbjct: 299 ALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVDSYSYAHGLK 358
Query: 326 ACCHAGFIDVG-----RQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
AC A + R++ +++R YG+ + ++D + G V AE + M
Sbjct: 359 ACIAASASHLPASARVREMHAHAIRRGYGLHTHVA--TTLIDCYAKLGIVSYAERVFTSM 416
Query: 380 VWKPD--VVMWGALLAACKNHGNIEVAERVVKEIIA----LEPNNHGVYVVL 425
PD +V W A++ + A ++ +E++A L PN+ + VL
Sbjct: 417 ---PDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVSVL 465
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 221/375 (58%), Gaps = 2/375 (0%)
Query: 58 ALSSSGDLSYATRLFNSIQ-SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
++S +G S A R+F+ + S N N++IR +++++ M + P+
Sbjct: 32 SVSRNGFESIA-RIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSS 90
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
TF VLKA + + K IH V + G D++ LV Y +++A Q+FDE+
Sbjct: 91 TFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEM 150
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
R W +I+GY + + +A+ F ML +G +P+ T+ VLSAC+ G G+
Sbjct: 151 PERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGK 210
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H F+ + +GTAL+ MY K GA+ + + +F+ + E+N+ TWN +ISG A +G
Sbjct: 211 WIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNG 270
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ AL F ++ E P+++TF+GVL ACCH G + GR F SMK+ +G++P+IEHY
Sbjct: 271 QGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHY 330
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GCMVDLLGR G + EA ELI+ M +PD ++W ALL AC+ HGN ++ E ++K +I LEP
Sbjct: 331 GCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEP 390
Query: 417 NNHGVYVVLSNMYAE 431
NN YV+LSN+Y+
Sbjct: 391 NNGENYVLLSNIYSR 405
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 250/451 (55%), Gaps = 38/451 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M + K++HA +I S Q +L+ SSS L +A LF++I P+ +++NT+
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMF 60
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R A+S P A+ L+ +M R G P+ +TF F+LKACS + L +++H K GL
Sbjct: 61 RVYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFGLG 120
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT--------------------- 186
+ V N L+ Y +S +++AR+VFD + R + WTT
Sbjct: 121 GHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFDEM 180
Query: 187 ----------MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
MI+ Y + R EAL LF ++ EP+ + SVL ACA G L++G
Sbjct: 181 PERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDVGR 240
Query: 237 KVHVFV-KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
V+ +V + +G + + + TAL+ M+ K G++ A +F+ E+++ W AM+SGLA H
Sbjct: 241 WVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMH 300
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G E+ ++ F K+ + PN +TFV +LS C H+G ++ G F M+ +G+EP +EH
Sbjct: 301 GLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEH 360
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
+GC+VDLLGR G + +A +LI M ++P+ +WG+LL AC+ + N+E+ E + +I E
Sbjct: 361 FGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQWLIKDE 420
Query: 416 PNNHGVYVVLSNMYAEA------ESMKMQLE 440
P N +Y+ L ++Y EA E +K++++
Sbjct: 421 PWNGALYMTLLSLYREAGRWDEVEKVKLKMK 451
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 218/373 (58%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G L A +F+ ++ + WN +I A + + ++ + L+++M R+ P+ +TF
Sbjct: 418 AKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFG 477
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+KAC+ ++LN ++H V KSG+ LD V + ++ Y L A ++ + + R
Sbjct: 478 SVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEER 537
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
T W ++ISG++ + AL F +ML G P++ T A+VL CA +ELG+++H
Sbjct: 538 TTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIH 597
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ + + +V MY+K G + ++ +F+ P+R+ TW+AMI A HG E
Sbjct: 598 GQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGE 657
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+A+ LF +++ + + PN F+ VL AC H GF+D G F M+ YG++P++EHY CM
Sbjct: 658 DAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCM 717
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G+V EA ELI+ M ++ D V+W LL C+ GN+EVAE+ ++ L+P +
Sbjct: 718 VDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDS 777
Query: 420 GVYVVLSNMYAEA 432
YV+LSN+YA A
Sbjct: 778 SAYVLLSNVYAIA 790
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 210/449 (46%), Gaps = 38/449 (8%)
Query: 6 SSLRQPPLPIPPLSLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAF---C-- 57
SS + P S + KC K+++ KQ HAQ+ ++ + F ++ LL F C
Sbjct: 29 SSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLN 88
Query: 58 ------------------------ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+ G++ +A LF+S+ + WN+++ +
Sbjct: 89 LNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQN 148
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
K+I ++ MR + TF VLKAC+ + Q+H + G D D+
Sbjct: 149 GFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTG 208
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
LV YS L++A +F E+ R W+ +I+GY ++ R E L L+ ML EG
Sbjct: 209 TALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMG 268
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
+ T AS +CA ELG ++H + F I+GTA + MY K + A+ +
Sbjct: 269 VSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKV 328
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH-AGF 332
F++ P + NA+I G A EAL++FR L+K + ++I+ G L+AC G+
Sbjct: 329 FNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGY 388
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++ G Q+ G + G++ I ++D+ +CG ++EA + M K D V W A++
Sbjct: 389 LE-GIQLHGLAVKC-GLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAII 445
Query: 393 AACKNHGNIEVAERVVKEII--ALEPNNH 419
AA + + ++E + ++ +EP+++
Sbjct: 446 AAHEQNEHVEETLALFVSMLRSTMEPDDY 474
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 184/358 (51%), Gaps = 5/358 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++FN+ +P N LI A +A+ ++ +++++ ++ + + L ACS
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
++ Q+H K GLD ++ V N ++ Y+ L A +FD++ + W +
Sbjct: 385 IKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAI 444
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I+ + Q+ E L LF ML EP+ T SV+ ACA L G +VH V G
Sbjct: 445 IAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM 504
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ +G+A++ MY K G L +A+ + + + ER +WN++ISG +S E AL F +
Sbjct: 505 GLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSR 564
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ + ++P++ T+ VL C + +++G+QI G + ++ + + +VD+ +CG
Sbjct: 565 MLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCG 623
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE--IIALEPNNHGVYV 423
+ ++ + ++ K D V W A++ A HG E A ++ +E + ++P NH +++
Sbjct: 624 NMQDSRIMFEKAP-KRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKP-NHTIFI 679
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 189/415 (45%), Gaps = 42/415 (10%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S+ L +A +F + N W+ +I + + + LY M G +Q TF
Sbjct: 216 STCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFA 275
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
++C+ + + Q+H + K+ D V + Y+ + +AR+VF+ N
Sbjct: 276 SAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNP 335
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC-AQSGCLELGEKV 238
T +I GYA+ + EAL +F + + + ++L+ L+AC A G LE G ++
Sbjct: 336 TRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLE-GIQL 394
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H G + + ++ MY K GAL +A +FD M ++ +WNA+I+ + H
Sbjct: 395 HGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHV 454
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYG 357
EE L LF + + + P+D TF V+ AC ++ G ++ G +K G++ +
Sbjct: 455 EETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVG--S 512
Query: 358 CMVDLLGRCGKVLEAEELIKRM------VWK----------------------------P 383
++D+ +CG ++EAE++ +R+ W P
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP 572
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV--VLSNMYAEAESMK 436
D + +L C N +E+ +++ +I+ L+ ++ VY+ + +MY++ +M+
Sbjct: 573 DNFTYATVLDICANLATVELGKQIHGQILKLQLHS-DVYIASTIVDMYSKCGNMQ 626
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 43/210 (20%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIH Q++ D + AS ++ S G++ + +F ++ W+ +I A A
Sbjct: 594 KQIHGQILKLQLHSDVYIASTIVDM--YSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYA 651
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV----RSLNCCKQIHTHVSKSGLD 147
+ AI L+ M+ PN F VL+AC+++ + L+ +++ +H GLD
Sbjct: 652 YHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHY---GLD 708
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ +C+V DL +S + NEAL L + M
Sbjct: 709 PQMEHYSCMV-------DL------------------------LGRSGQVNEALELIESM 737
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEK 237
FE + V ++L C G +E+ EK
Sbjct: 738 ---PFEADDVIWRTLLGICRLQGNVEVAEK 764
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 225/392 (57%), Gaps = 8/392 (2%)
Query: 53 LLAFCALSSS--------GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
LL F ALS++ L+ A ++F+S N W+ ++ + + +A+ L+
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS 311
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M G P+++T VL ACS++ L KQ+H+ + K G + L LV Y+ +
Sbjct: 312 RMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAG 371
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
L +AR+ FD ++ R + +WT++ISGY Q+ EAL+L+ +M G PN T+ASVL
Sbjct: 372 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC+ LELG++VH GF + +G+AL MY+K G+L +F P +++ +
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNAMISGL+ +G +EAL+LF ++ E + P+D+TFV ++SAC H GF++ G F M
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
G++PK++HY CMVDLL R G++ EA+E I+ + +W LL+ACKNHG E+
Sbjct: 552 DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
++++AL YV LS +Y M+
Sbjct: 612 VYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 212/394 (53%), Gaps = 14/394 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q HA ++ S D + + L+ +C +G + ++F + N + W+T++
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYC---KAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 91 ASSLNPDKAIF---LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
A+ ++AI L++ + G + + + FT VL + + + +QIH K+GL
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLL 253
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ + N LV YS LN A ++FD +R W+ M++GY+Q+ + EA+ LF +M
Sbjct: 254 GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
G +P+ T+ VL+AC+ LE G+++H F+ GFE TALV MY K G L
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A A+ FD + ER++A W ++ISG + EEAL L+R+++ I+PND T VL AC
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 328 CHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
+++G+Q+ G ++K +G+E I + + +CG LE L+ R DVV
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGS-LEDGNLVFRRTPNKDVV 490
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIA--LEPNN 418
W A+++ ++G + A + +E++A +EP++
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 189/371 (50%), Gaps = 15/371 (4%)
Query: 32 KQIHAQMI---ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
+ +H Q+I S+ IQ A+ L+ F A G L+ A +FN+I + WN+LI
Sbjct: 34 RAVHGQIIRTGASTCIQH---ANVLVNFYA--KCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 89 --AQASSLNPDKAIF-LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+Q ++ + L+ MR PN +T + KA S+++S +Q H V K
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D++V LV Y + + + +VF + R W+TM+SGYA R EA+ +F+
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 206 QMLMEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
L E E + +VLS+ A + + LG ++H G L ALV MY+K
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
+L +A +FDS +RN TW+AM++G + +G + EA+ LF ++ I P++ T VGV
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L+AC +++ G+Q+ + ++ G E + +VD+ + G + +A + + +
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGFD-CLQER 386
Query: 384 DVVMWGALLAA 394
DV +W +L++
Sbjct: 387 DVALWTSLISG 397
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 11/235 (4%)
Query: 114 NQHTFTFVLKAC--SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
N HT T + K S R+L + +H + ++G + N LV Y+ L A
Sbjct: 11 NPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEA---LMLFDQMLMEGFEPNSVTLASVLSACAQ 228
+F+ I + + W ++I+GY+Q+ + + + LF +M + PN+ TLA + A +
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 229 SGCLELGEKVHVF-VKMRGFEMGAI-LGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+G + H VKM F G I + T+LV MY K G + +F MPERN TW+
Sbjct: 131 LQSSTVGRQAHALVVKMSSF--GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 287 AMISGLASHGHAEEALDLFRKL--EKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
M+SG A+ G EEA+ +F EKE+ +D F VLS+ ++ +GRQI
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 242/431 (56%), Gaps = 14/431 (3%)
Query: 25 CKSMHQLKQIHAQMIISSR-IQDHFA-ASRLLAFC---ALSSSGDLSYATRLFNSIQSPN 79
C S+ L Q+HA + + +Q H A +RLL C + L+YA ++F+ I P
Sbjct: 38 CTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPG 97
Query: 80 HFMW-NTLIRAQASSLN----PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+W NTL+R A ++A +++ M G AP+ +TF +LKAC++ R+
Sbjct: 98 DVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEG 157
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+Q H K+G +V L+ Y+ D+ AR +FD + + + MI+ +S
Sbjct: 158 RQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRS 217
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EAL+LF +M +G +P SVTL SVLSACA G LELG +H +++ + +
Sbjct: 218 SLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVN 277
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
TAL+ MY K G+L A +F M R+ W+ M+ A+HG+ EA+ +F +++K+ +
Sbjct: 278 TALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK 337
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+D+TF+GVL AC H+G + G Q F SM R YGI I+HYGC+ DLL R G++ A +
Sbjct: 338 PDDVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYK 396
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA-- 432
I + KP ++W LL+AC HG++++ +RV + I+ L+ ++ G YV+ SN+ A
Sbjct: 397 FIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGR 456
Query: 433 -ESMKMQLEIL 442
E M M +++
Sbjct: 457 WEEMNMVRKLM 467
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 17/290 (5%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLH---VVNCLVRCYSVSSD----LNNARQVFD 174
L C+++R+L Q+H K+G L H V L C ++ L ARQVFD
Sbjct: 35 LPHCTSLRAL---AQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFD 91
Query: 175 EIRNRTLNVW-TTMISGYAQSFR----ANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
I + VW T++ GYA+ A EA +F +M+ EG P++ T S+L ACA +
Sbjct: 92 RIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASA 151
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
E G + H G + L++MY + G + A+ +FD M + ++NAMI
Sbjct: 152 RAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMI 211
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
+ EAL LFR+++ + + P +T + VLSAC G +++GR I ++++ +
Sbjct: 212 TASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMR-L 270
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ ++ ++D+ +CG + +A + + M + D W ++ A NHG
Sbjct: 271 DSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR-DKQAWSVMMVAYANHG 319
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 158/419 (37%), Positives = 237/419 (56%), Gaps = 7/419 (1%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHF---AASRLLAFCALSSSGDLSYATRLFNSIQ 76
LL D + L + A RI H A+ L+A A S G+L A LF+ I
Sbjct: 159 LLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIA--AYSKCGNLCSAETLFDEIN 216
Query: 77 S--PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
S + WN++I A A+ KA+ Y M GF+P+ T +L +C ++L
Sbjct: 217 SGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHG 276
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+H+H K G D D+ VVN L+ YS D+++AR +F+ + ++T WT MIS YA+
Sbjct: 277 LLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEK 336
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+EA+ LF+ M G +P+ VT+ +++S C Q+G LELG+ + + G + ++
Sbjct: 337 GYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVC 396
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ MY K G AK LF +M R + +W MI+ A +G ++AL+LF + + +
Sbjct: 397 NALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMK 456
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN ITF+ VL AC H G ++ G + F M + YGI P I+HY CMVDLLGR G + EA E
Sbjct: 457 PNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALE 516
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+IK M ++PD +W ALL+ACK HG +E+ + V +++ LEP YV ++N+YA AE
Sbjct: 517 IIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAE 575
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 182/367 (49%), Gaps = 6/367 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F + + WN ++ A S D+ L +MR +G P+ T ++
Sbjct: 102 GRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLI 161
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--RT 180
+ V+SL +++ + G+ +D+ V N L+ YS +L +A +FDEI + R+
Sbjct: 162 DSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRS 221
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ W +MI+ YA + +A+ + ML GF P+ T+ ++LS+C Q L G VH
Sbjct: 222 VVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHS 281
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
G + + L+ MY+K G + A+ LF+ M ++ +W MIS A G+ E
Sbjct: 282 HGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSE 341
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
A+ LF +E P+ +T + ++S C G +++G+ I + G++ + ++
Sbjct: 342 AMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWI-DNYSINNGLKDNVVVCNALI 400
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
D+ +CG +A+EL M + VV W ++ AC +G+++ A + ++ ++PN+
Sbjct: 401 DMYAKCGGFNDAKELFYTMANRT-VVSWTTMITACALNGDVKDALELFFMMLEMGMKPNH 459
Query: 419 HGVYVVL 425
VL
Sbjct: 460 ITFLAVL 466
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 153/331 (46%), Gaps = 14/331 (4%)
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F WN+ R + + A+ L+ M+++G PN TF FVLKAC+ + L + IH H
Sbjct: 19 FTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAH 78
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
V KS ++ V V Y L +A VF E+ R + W M+ G+AQS +
Sbjct: 79 VLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRL 138
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L M + G P++VT+ ++ + + L V+ F G M + L+
Sbjct: 139 SCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAA 198
Query: 261 YTKNGALAKAKALFDSMPE--RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
Y+K G L A+ LFD + R++ +WN+MI+ A+ +A++ ++ + P+
Sbjct: 199 YSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDIS 258
Query: 319 TFVGVLSACCHAGFIDVGRQIF-GSMKRVYGIEPKIEHYGCMVDLL----GRCGKVLEAE 373
T + +LS+C + +F G + +G++ + C+V+ L +CG V A
Sbjct: 259 TILNLLSSCMQP------KALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSAR 312
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
L M K V W +++A G + A
Sbjct: 313 FLFNGMSDKT-CVSWTVMISAYAEKGYMSEA 342
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
R TL W + A AL+LF QM G PN+ T VL ACA+ L +
Sbjct: 14 RFSTLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQ 73
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H V F+ + TA V MY K G L A +F MP R+IA+WNAM+ G A G
Sbjct: 74 IIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSG 133
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ L R + I P+ +T + ++ + + ++ R+ G+ +
Sbjct: 134 FLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRI-GVHMDVSVA 192
Query: 357 GCMVDLLGRCGKVLEAEELIKRM-VWKPDVVMWGALLAACKN 397
++ +CG + AE L + VV W +++AA N
Sbjct: 193 NTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYAN 234
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 228/387 (58%), Gaps = 9/387 (2%)
Query: 50 ASRLLAFCALSSSGDLSYATRLFNSI--QSP-NHFMWNTLIRAQASSLNPDKAIFLYMNM 106
A LL A + L YA + + + P + F NT++R A S P A+ L+
Sbjct: 739 AKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELH--- 795
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
RR P+ HT+ +++AC+ + +L + +H +K+G + V N LV Y
Sbjct: 796 RRRLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLF 855
Query: 167 NNARQVFDE--IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
+A +VFDE +R R L W +M++ +A + R NE L +F +ML F P+ T+ SVL+
Sbjct: 856 ESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLT 915
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIA 283
ACA+ G L LG +VHV+V+ G + + AL+ +Y K G++ A+ +F+ M R +
Sbjct: 916 ACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVV 975
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+W ++I GLA++G +EAL+LF +E+E++VP +IT VGVL AC H G +D G + F M
Sbjct: 976 SWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM 1035
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
K YGI P+IEH GCMVDLLGR G+V EA + I M +P+ V+W LL +C H +E+
Sbjct: 1036 KEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLEL 1095
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYA 430
+ + ++ L+P + G YV+LSN+YA
Sbjct: 1096 GKVAWERLVELDPGHSGDYVLLSNLYA 1122
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 230/401 (57%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH MI ++ D + L+ A + L A ++F+ + + + N LI +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHF--LDDARKVFDWMFHRDLILCNALISGCS 380
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
D+A+ L+ +R+ G N+ T VLK+ +++ + + +Q+H K G D H
Sbjct: 381 HGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAH 440
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
VVN L+ Y S L++A +VF+E + + T+MI+ +Q A+ LF +ML +G
Sbjct: 441 VVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG 500
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ L+S+L+ACA E G++VH + R F A G ALV+ Y K G++ A+
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F S+PER + +W+AMI GLA HGH + AL+LF ++ E I PN IT VL AC HAG
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D ++ F SMK ++GI+ EHY CM+DLLGR GK+ +A EL+ M ++ + +WGAL
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L A + H + E+ + +++ LEP G +V+L+N YA A
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASA 721
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 9/385 (2%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A R F+ I P H W++L+ A +++ P AI + MR G N+ VLK +
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN-RTLNVWTT 186
R Q+H +G D+ V N LV Y +++AR+VF+E + R W
Sbjct: 116 AR---LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNG 172
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
++S Y ++ + +A+ +F +M+ G +P + V++AC S +E G +VH V G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
++ ALV MY K G + A +F+ MP+ ++ +WNA+ISG +GH A++L
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+++ +VPN T +L AC AG D+GRQI G M + G +VD+ +
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKN 351
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVV 424
+ +A ++ M + D+++ AL++ C + G + A + E+ L N + V
Sbjct: 352 HFLDDARKVFDWMFHR-DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 425 L-SNMYAEAESMKMQLEILLVQVLF 448
L S EA S Q+ L V++ F
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGF 435
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 3/308 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP-NHFMWNTLIRAQA 91
Q+HA + + D F A+ L+A G + A R+FN S N WN L+ A
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ AI ++ M +G P + F+ V+ AC+ R++ +Q+H V + G D D+
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N LV Y ++ A +F+++ + + W +ISG + + A+ L QM G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN TL+S+L AC+ +G +LG ++H F+ + +G LV MY KN L A+
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M R++ NA+ISG + G +EAL LF +L KE + N T VL +
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418
Query: 332 FIDVGRQI 339
RQ+
Sbjct: 419 AASTTRQV 426
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 12/392 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+HA ++ +D F A+ L+ G + A+ +F + + WN LI
Sbjct: 222 RQVHAMVVRMGYDKDVFTANALVDM--YMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + +AI L + M+ +G PN T + +LKACS + + +QIH + K+ D D +
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y+ + L++AR+VFD + +R L + +ISG + R +EAL LF ++ EG
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
N TLA+VL + A +VH GF A + L+ Y K L+ A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +I +MI+ L+ H E A+ LF ++ ++ + P+ +L+AC
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 332 FIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ G+Q+ + KR + + + +V +CG + +A EL + + VV W A
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIEDA-ELAFSSLPERGVVSWSA 576
Query: 391 LLAACKNHGN----IEVAERVVKEIIALEPNN 418
++ HG+ +E+ R+V E + PN+
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDE--GINPNH 606
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 6/248 (2%)
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L+ YS AR+ FDEI + W+++++ Y+ + A+ F M EG
Sbjct: 41 NHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
N L VL + LG +VH GF + ALV MY G + A+ +
Sbjct: 101 CNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRV 157
Query: 274 FDSM-PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
F+ ERN +WN ++S + +A+ +F ++ I P + F V++AC +
Sbjct: 158 FNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRN 217
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
I+ GRQ+ + R+ G + + +VD+ + G+V A + ++M DVV W AL+
Sbjct: 218 IEAGRQVHAMVVRM-GYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALI 275
Query: 393 AACKNHGN 400
+ C +G+
Sbjct: 276 SGCVLNGH 283
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 8 LRQPPLPIP-PLSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
LR+ P P LS L + C S+ Q KQ+HA +I + D FA + L+ + G
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY--TYAKCG 554
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+ A F+S+ W+ +I A + +A+ L+ M G PN T T VL
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 124 ACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
AC++ ++ K+ + + G+D +C++ + L++A ++ + +
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 668
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 245/415 (59%), Gaps = 10/415 (2%)
Query: 25 CKSMHQLKQIHAQM--IISSRIQDHFAASRLLAFCALSSSGDLSYATR----LFNSIQSP 78
C+ + L+ HA + + R+ FA S+LLA CA + + + A+ LF+ I P
Sbjct: 28 CRGLLALRSAHAHLTRLRLPRLTAAFALSKLLAACASAPAPPAAAASSYARTLFDQIPDP 87
Query: 79 NHFMWNTLIRAQASSLNPDKAIF-LYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQ 136
F +N+LIRA ++ +Y M R G PN T F LKAC+ V + +Q
Sbjct: 88 TAFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPRPNTFTLAFALKACAAVPAPGEGRQ 147
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-NRTLNVWTTMISGYAQSF 195
+H + GL+ +V L+ Y+ + AR VFD + +++L W+ MI+GY++
Sbjct: 148 LHAQALRQGLEASAYVQTGLLNLYAKCEQVALARTVFDGMAPDKSLVAWSAMINGYSRVG 207
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
EAL LF +M G EP+ VT+ V+SACA++G L+LG+ VH ++ +G + L T
Sbjct: 208 MVTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGKWVHAYIDRKGITVDLELST 267
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
AL+ MY K G + +A+ +FD+M E++ W+AMI G A HG E+AL LF ++ + ++ P
Sbjct: 268 ALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRP 327
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
N++TF+GVLSAC H+G +D GR+ + M+ + GI+P +E+YGCM+DLL R G + +A
Sbjct: 328 NNVTFIGVLSACAHSGLVDDGRRYWSIMQNL-GIKPSMENYGCMIDLLCRSGLLDDAYSF 386
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ M P+ ++W LL ACK+ I++AE K ++ LEP+N YV+LSN+ A
Sbjct: 387 VIDMPISPNSIIWRTLLVACKSSNRIDIAESASKRLLELEPHNPENYVLLSNLCA 441
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 228/402 (56%), Gaps = 2/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H ++ ++ +D + LL + GD A R F + + W+ +I A
Sbjct: 167 KTVHCSVLKTNYERDLYVGVGLLEL--YTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFA 224
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S +KA+ ++ MRR PNQ TF+ VL+A +++ SL+ K IH H K+GL D+
Sbjct: 225 QSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVF 284
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ CY+ + + ++F+ + +R W T+I Y Q AL LF ML
Sbjct: 285 VSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQ 344
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+ VT +S+L ACA LELG +VH + +G AL+ MY K G++ A+
Sbjct: 345 VQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDAR 404
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD + R+ +WNA+I G + HG EA+ +F +++ + P+++TFVGVLSAC + G
Sbjct: 405 FMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTG 464
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G+Q F SMK+ YGIEP +EHY CMV L+GR G + +A + I+ + ++P V++W AL
Sbjct: 465 RLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRAL 524
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
L AC H ++E+ + ++ LEP + +V+LSN+YA A
Sbjct: 525 LGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARAR 566
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 174/343 (50%), Gaps = 4/343 (1%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A S SG +S A +F+ I S + W +I + A + +A+ + MR GF PN T
Sbjct: 90 AYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFT 149
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F VLKAC +++ + K +H V K+ + DL+V L+ Y+ D ++A + F ++
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ W+ MIS +AQS ++ +AL +F QM PN T +SVL A A L+L +
Sbjct: 210 KNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKT 269
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H G + AL+ Y K G + ++ LF+++ +RN +WN +I G
Sbjct: 270 IHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD 329
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHY 356
E AL LF + + Q+ ++T+ +L AC +++G Q+ + K +YG + + +
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN- 388
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
++D+ +CG + +A + M+ D V W A++ HG
Sbjct: 389 -ALIDMYAKCGSIKDARFMFD-MLDLRDKVSWNAIICGYSMHG 429
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 165/334 (49%), Gaps = 2/334 (0%)
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
+F+ + N + TLI A S +A L+ + G N FT VLK ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
+ +H V K G + + L+ YSVS ++ AR+VFDEI ++ + WT MI+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
YA++ +EAL F QM + GF+PN+ T A VL AC + G+ VH V +E
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+G L+ +YT+ G A F MP+ ++ W+ MIS A G +E+AL++F ++ +
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
++PN TF VL A +D+ + I G + G+ + ++ +CG +
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKA-GLSTDVFVSNALMACYAKCGCIE 300
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++ EL + + + DV W ++ + G+ E A
Sbjct: 301 QSMELFEALSDRNDVS-WNTIIVSYVQLGDGERA 333
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 227/402 (56%), Gaps = 6/402 (1%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
+ K H +I D + LL+ +C G L A + F + N WN ++
Sbjct: 686 EAKAFHGLIIRRHYTLDQMVQNALLSMYCKF---GFLKLAEKFFGRVNEQNFEAWNLMVS 742
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
K I L+ M+ G + ++ V+ +CS + + + + IH ++ K+ +D
Sbjct: 743 GYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDE 802
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++ V N L+ Y S +L AR++F I R + W T+IS YA EAL L+D+M+
Sbjct: 803 NVSVNNSLIDMYGKSGNLTIARRIFCRI-PRDIVTWNTLISSYAHCGHFAEALSLYDKMV 861
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+E +PNS TL VLSAC+ LE GEKVH ++ FE + TAL+ MY K G L
Sbjct: 862 LEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLE 921
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
K++ +F+SM ER++ TWN MISG HG A A++ F+++E+ PN +TF+ VLSAC
Sbjct: 922 KSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACA 981
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
HAG + G+ +FG M+ Y + P ++HY CMVDLLGR G + EAE L+ M PD +W
Sbjct: 982 HAGLVKEGKYLFGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVW 1040
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
GALL++CK H IE+ R+ K I + N G YV++SNMY+
Sbjct: 1041 GALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVMISNMYS 1082
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 173/369 (46%), Gaps = 5/369 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+ A R F + + + W ++I A + + I ++ M +G P+ +
Sbjct: 613 SKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVIS 672
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L + SN + K H + + LD V N L+ Y L A + F + +
Sbjct: 673 CMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQ 732
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W M+SGY + + + LF +M G E +S +L SV+S+C+Q G L +H
Sbjct: 733 NFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIH 792
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
++ + + +L+ MY K+G L A+ +F +P R+I TWN +IS A GH
Sbjct: 793 CYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFA 851
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL L+ K+ E + PN T V VLSAC H ++ G ++ + E + +
Sbjct: 852 EALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGG-KFEFNLSIATAL 910
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPN 417
+D+ +CG++ ++ E+ M + DV+ W +++ HG+ A +++ + +PN
Sbjct: 911 IDMYAKCGQLEKSREIFNSMH-ERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPN 969
Query: 418 NHGVYVVLS 426
VLS
Sbjct: 970 GLTFLAVLS 978
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 159/319 (49%), Gaps = 5/319 (1%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA 169
G PN T +AC N+ +L + +H V K+G+D V + L+ YS + A
Sbjct: 562 GERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEA 621
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
+ F E+ N+ + WT+MIS Y++ A E + +F +ML+ G P+ + ++ +LS+ + S
Sbjct: 622 HRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNS 681
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
+ + H + R + + ++ AL+ MY K G L A+ F + E+N WN M+
Sbjct: 682 MRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMV 741
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
SG G + + LFR+++ I + + V V+S+C G + R I M + +
Sbjct: 742 SGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNL-M 800
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ + ++D+ G+ G + A + R+ D+V W L+++ + G+ A +
Sbjct: 801 DENVSVNNSLIDMYGKSGNLTIARRIFCRI--PRDIVTWNTLISSYAHCGHFAEALSLYD 858
Query: 410 EIIA--LEPNNHGVYVVLS 426
+++ L+PN+ + VLS
Sbjct: 859 KMVLEDLKPNSATLVXVLS 877
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 42/236 (17%)
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
R + W ++G +S E L ++ +G PN TL AC G L G +
Sbjct: 532 RNVEFWRRHMNG--ESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCL 589
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H V G + ++ ++L+ MY+K G +A F + ++I +W +MIS + G A
Sbjct: 590 HGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWA 649
Query: 299 EEALDLFRKLEKEQIVPNDIT-------------------FVG----------------V 323
E +D+F ++ I P+ I F G +
Sbjct: 650 TECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNAL 709
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
LS C GF+ + + FG + E E + MV G+ G +++ L + M
Sbjct: 710 LSMYCKFGFLKLAEKFFGRVN-----EQNFEAWNLMVSGYGKIGLIMKCIGLFREM 760
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIAT----WNAMISGLASHGHAEEALDLFRKLEK 310
TAL+H Y +N KA+AL + M E +N MIS S G E+ + ++L K
Sbjct: 161 TALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQEL-K 219
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
+ P+ +T+ L+ C ++ ++ +K+ I+P Y + +L + G +
Sbjct: 220 KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKA-KIDPDWVTYSSLTNLYIKKGLLD 278
Query: 371 EAEELIKRM 379
+A + M
Sbjct: 279 KAATTLNEM 287
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 55/279 (19%)
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
Q L + P+ VT L+ CA +E EKV + +K + + ++L ++Y K G
Sbjct: 216 QELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKG 275
Query: 266 ALAKAKALFDSMPER---------------------------------------NIATWN 286
L KA + M +R N A +
Sbjct: 276 LLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYT 335
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG--VLSACCHAGFIDVGRQIFGSMK 344
MIS L G EEA +L+ E + P + V +L+A + +++ + + M
Sbjct: 336 CMISSLVKLGEFEEAENLYS--EWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMV 393
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV-----WKPDVVMWGALLAACKNHG 399
GI P + + + ++ + + ++ V W PD + + + G
Sbjct: 394 E-RGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQG 452
Query: 400 NIEVAERVVKEIIALEPNNH---GVYVVLSNMYAEAESM 435
NIE AE+V ++ L H +Y L YA+A M
Sbjct: 453 NIEGAEKV---LVILRKAGHVSTEIYNWLLRAYAKAGKM 488
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 214/370 (57%), Gaps = 6/370 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDK-AIFLYMNMRRTGFAPNQHTFTFV 121
G L A LF + N W T++ A A++ K A+ + MRR G A N +TF+ V
Sbjct: 121 GMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSV 180
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC L +H + K GLD D+ V + L+ Y DL++ R VFDE+ L
Sbjct: 181 LGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDL 237
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
VW ++I+G+AQS A+ LF +M GF N TL SVL AC LE+G +VH
Sbjct: 238 VVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAH 297
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
V ++ IL AL+ MY K G L A ALF M +R++ +W+ MISGLA +G + EA
Sbjct: 298 VLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEA 355
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L +F ++ E PN+IT VGVL AC HAG ++ G F SM +++GI+P+ EH CMVD
Sbjct: 356 LKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVD 415
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LLGR GK+ EA + I M ++PD V+W LL AC+ H N +A EI+ LEP + G
Sbjct: 416 LLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLEPEDQGA 475
Query: 422 YVVLSNMYAE 431
++LSN+YA+
Sbjct: 476 RILLSNIYAD 485
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM------RGFEMGAIL 253
AL L + G + V+L ++ C + G + G +H V + +
Sbjct: 50 ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA-SHGHAEEALDLFRKLEKEQ 312
+LV MY K G L A LF MP+RN+ +W +++ LA + G +EAL ++ ++
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ N TF VL AC G + + + +V G++ + ++D + G +
Sbjct: 170 VAANSYTFSSVLGACGTPGVLAA---MHADIIKV-GLDSDVFVRSSLIDAYMKLGDLDSG 225
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGN 400
+ MV D+V+W +++A G+
Sbjct: 226 RGVFDEMV-TCDLVVWNSIIAGFAQSGD 252
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 147/401 (36%), Positives = 230/401 (57%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH MI ++ D + L+ A + L A ++F+ + + + N LI +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHF--LDDARKVFDWMFHRDLILCNALISGCS 380
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
D+A+ L+ +R+ G N+ T VLK+ +++ + + +Q+H K G D H
Sbjct: 381 HGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAH 440
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
VVN L+ Y S L++A +VF+E + + T+MI+ +Q A+ LF +ML +G
Sbjct: 441 VVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG 500
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ L+S+L+ACA E G++VH + R F A G ALV+ Y K G++ A+
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F S+PER + +W+AMI GLA HGH + AL+LF ++ E I PN IT VL AC HAG
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D ++ F SMK ++GI+ EHY CM+DLLGR GK+ +A EL+ M ++ + +WGAL
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L A + H + E+ + +++ LEP G +V+L+N YA A
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASA 721
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 191/385 (49%), Gaps = 9/385 (2%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A R+F+ I P H W++L+ A +++ P AI + MR G N+ VLK +
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPD 115
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN-RTLNVWTT 186
R Q+H +G D+ V N LV Y +++AR+VF+E + R W
Sbjct: 116 AR---LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNG 172
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
++S Y ++ + +A+ +F +M+ G +P + V++AC S +E G +VH V G
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
++ ALV MY K G + A +F+ MP+ ++ +WNA+ISG +GH A++L
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+++ +VPN T +L AC AG D+GRQI G M + G +VD+ +
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKN 351
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVV 424
+ +A ++ M + D+++ AL++ C + G + A + E+ L N + V
Sbjct: 352 HFLDDARKVFDWMFHR-DLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 425 L-SNMYAEAESMKMQLEILLVQVLF 448
L S EA S Q+ L V++ F
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGF 435
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 3/308 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP-NHFMWNTLIRAQA 91
Q+HA + + D F A+ L+A G + A R+FN S N WN L+ A
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ AI ++ M +G P + F+ V+ AC+ R++ +Q+H V + G D D+
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N LV Y ++ A +F+++ + + W +ISG + + A+ L QM G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN TL+S+L AC+ +G +LG ++H F+ + +G LV MY KN L A+
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M R++ NA+ISG + G +EAL LF +L KE + N T VL +
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418
Query: 332 FIDVGRQI 339
RQ+
Sbjct: 419 AASTTRQV 426
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 12/392 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+HA ++ +D F A+ L+ G + A+ +F + + WN LI
Sbjct: 222 RQVHAMVVRMGYDKDVFTANALVDM--YMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + +AI L + M+ +G PN T + +LKACS + + +QIH + K+ D D +
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y+ + L++AR+VFD + +R L + +ISG + R +EAL LF ++ EG
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
N TLA+VL + A +VH GF A + L+ Y K L+ A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +I +MI+ L+ H E A+ LF ++ ++ + P+ +L+AC
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 332 FIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ G+Q+ + KR + + + +V +CG + +A EL + + VV W A
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIEDA-ELAFSSLPERGVVSWSA 576
Query: 391 LLAACKNHGN----IEVAERVVKEIIALEPNN 418
++ HG+ +E+ R+V E + PN+
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDE--GINPNH 606
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 6/248 (2%)
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L+ YS AR+VFDEI + W+++++ Y+ + A+ F M EG
Sbjct: 41 NHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVC 100
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
N L VL + LG +VH GF + ALV MY G + A+ +
Sbjct: 101 CNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRV 157
Query: 274 FDSM-PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
F+ ERN +WN ++S + +A+ +F ++ I P + F V++AC +
Sbjct: 158 FNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRN 217
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
I+ GRQ+ + R+ G + + +VD+ + G+V A + ++M DVV W AL+
Sbjct: 218 IEAGRQVHAMVVRM-GYDKDVFTANALVDMYMKMGRVDIASVIFEKMP-DSDVVSWNALI 275
Query: 393 AACKNHGN 400
+ C +G+
Sbjct: 276 SGCVLNGH 283
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 8 LRQPPLPIP-PLSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
LR+ P P LS L + C S+ Q KQ+HA +I + D FA + L+ + G
Sbjct: 497 LRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY--TYAKCG 554
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+ A F+S+ W+ +I A + +A+ L+ M G PN T T VL
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 124 ACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
AC++ ++ K+ + + G+D +C++ + L++A ++ + +
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 668
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 225/392 (57%), Gaps = 8/392 (2%)
Query: 53 LLAFCALSSS--------GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
LL F ALS++ L+ A ++F+S N W+ ++ + + +AI L+
Sbjct: 241 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFS 300
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M G P+++T VL ACS++ L KQ+H+ + K G + L LV Y+ +
Sbjct: 301 RMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAG 360
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
L +AR+ FD ++ R + +WT++ISGY Q+ EAL+L+ +M G PN T+ASVL
Sbjct: 361 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 420
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC+ LELG++VH GF + +G+AL MYTK G+L +F P +++ +
Sbjct: 421 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVS 480
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNAMISGL+ +G +EAL+LF ++ E P+D+TFV ++SAC H GF++ G F M
Sbjct: 481 WNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMS 540
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+G++PK++HY CMVD+L R G++ E +E I+ + +W LL+ACKNHGN E+
Sbjct: 541 DQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELG 600
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+++++L YV L+ +Y M+
Sbjct: 601 VYAGEKLMSLGSRESSTYVQLAGIYTALGRMR 632
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 171/310 (55%), Gaps = 6/310 (1%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
+ + + FT VL + + + +QIH K+GL + + N LV YS LN A +
Sbjct: 207 SDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACK 266
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
+FD +R W+ M++GY+Q+ + EA+ LF +M G +P+ T+ VL+AC+
Sbjct: 267 MFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICY 326
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L G+++H F+ GFE TALV MY K G LA A+ FD + ER++A W ++ISG
Sbjct: 327 LVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 386
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIE 350
+ EEAL L+R+++ I+PND T VL AC +++G+Q+ G ++K +G+E
Sbjct: 387 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 446
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
I + + +CG LE L+ R DVV W A+++ ++G + A + +E
Sbjct: 447 VPIG--SALSTMYTKCGS-LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEE 503
Query: 411 IIA--LEPNN 418
++A EP++
Sbjct: 504 MLAEGTEPDD 513
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 170/366 (46%), Gaps = 18/366 (4%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR--A 89
+ +HAQ+I + A+ L+ F A G L+ A +FN+I + WN+LI +
Sbjct: 36 RAVHAQIIRTGTSTCTQHANVLVNFYA--KCGQLAKAHSIFNAIICKDVVSWNSLITGYS 93
Query: 90 QASSLNPDKAIF-LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
Q ++ + L+ MR PN +T + KA S+++S +Q H V K
Sbjct: 94 QNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFG 153
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D++V LV Y + L V+ W + + L ++
Sbjct: 154 DIYVDTSLVGMY-CKAGLKYLYMVY-------YGFWLCYKKDVLRRQLKSSICFLEEK-- 203
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
E + +VLS+ A + + LG ++H G L ALV MY+K +L
Sbjct: 204 -EKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLN 262
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+A +FDS +RN TW+AM++G + +G + EA+ LF ++ I P++ T VGVL+AC
Sbjct: 263 EACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACS 322
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
++ G+Q+ + ++ G E + +VD+ + G + +A + + + DV +W
Sbjct: 323 DICYLVEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGFD-CLQERDVALW 380
Query: 389 GALLAA 394
+L++
Sbjct: 381 TSLISG 386
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 144/334 (43%), Gaps = 24/334 (7%)
Query: 102 LYMNMRRTGFAPNQHTFTFV--LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC 159
+Y + +T P HT T + L S R+L + +H + ++G N LV
Sbjct: 1 MYPSTFQTEINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNF 60
Query: 160 YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS---FRANEALMLFDQMLMEGFEPNS 216
Y+ L A +F+ I + + W ++I+GY+Q+ ++ + LF +M + PN+
Sbjct: 61 YAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNA 120
Query: 217 VTLASVLSACAQSGCLELGEKVHVF-VKMRGFEMGAI-LGTALVHMYTKNGALAKAKALF 274
TLA + A + +G + H VKM F G I + T+LV MY K G K L+
Sbjct: 121 YTLAGIFKAESSLQSCTVGRQAHALVVKMSSF--GDIYVDTSLVGMYCKAG----LKYLY 174
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
W + + ++ + EKE +D F VLS+ ++
Sbjct: 175 MVY----YGFWLCYKKDVLRR-QLKSSICFLEEKEKES--DSDYVFTAVLSSLAATVYVG 227
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+GRQI G + G+ + +V + +C + EA ++ + + W A++
Sbjct: 228 LGRQIHGITVK-NGLLGFVALSNALVTMYSKCESLNEACKMFDSS-GDRNSITWSAMVTG 285
Query: 395 CKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+G A ++ + + ++P+ + + VL+
Sbjct: 286 YSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLN 319
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 175/574 (30%), Positives = 290/574 (50%), Gaps = 49/574 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
L L AD KS+ ++IH+ +I S+ ++ D S+L+ + GDL R+F+ +
Sbjct: 108 LQLCAD-LKSIQDGRRIHS-IIQSNDVEVDGVLGSKLVFM--YVTCGDLREGRRIFDKVA 163
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT-FVLKACSNVRSLNC-- 133
+ F+WN L+ A N +++ L+ MR G + F +V S N
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMI 223
Query: 134 CKQIHTHVSKSGLDL-------------------DLHVVNCLVRCYSVSSDLNNARQVFD 174
+ +S+ GLDL +L + NCL+ YS S +LN+A QVF+
Sbjct: 224 SGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFE 283
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
+ R++ WT+MI+GYA+ ++ ++ LF +M E PNS+T+A +L ACA LE
Sbjct: 284 TMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALER 343
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G+++H + GF + + ALV MY K GAL A+ LFD +PE+++ +W MI+G
Sbjct: 344 GQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGM 403
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG+ EA+ F ++ I P++++F+ +L AC H+G +D G F M+ IEPK E
Sbjct: 404 HGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSE 463
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HY C+VDLL R G + +A + IK M +PD +WGALL C+ + ++++AE+V + + L
Sbjct: 464 HYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFEL 523
Query: 415 EPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDFESPPTNLTPNR 474
EP N G YV+L+N+YAEAE + +++ L ++ GL ++P + +
Sbjct: 524 EPENTGYYVLLANIYAEAEKWE-EVKKLRERIGRRGLR-----------KNPGCSWIEIK 571
Query: 475 STPFVLLNGNNTIPGWTFEGTVQYVTASQTIRLPDNGH------AIQLAQDGRINQTFAA 528
+ + G+++ P ++ + R+ + GH A+ A D
Sbjct: 572 GKVHIFVTGDSSHP---LANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCG 628
Query: 529 DGDDLIYILTLTLAPGGQNCSANANLVVSAPDSH 562
+ + + P G+ NL V D H
Sbjct: 629 HSEKIAMAFGILSLPPGKTVRVTKNLRVCG-DCH 661
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 162/327 (49%), Gaps = 36/327 (11%)
Query: 105 NMRRTGFAPNQ--------HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL 156
N+RR NQ T+ VL+ C++++S+ ++IH+ + + +++D + + L
Sbjct: 83 NLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKL 142
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF---- 212
V Y DL R++FD++ N + +W +++GYA+ E+L LF +M G
Sbjct: 143 VFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVE 202
Query: 213 ----------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT------- 255
+ + ++ S++S +G E G + +F +M + L T
Sbjct: 203 SARKLFDELGDRDVISWNSMISGYVSNGLSEKG--LDLFEQMLLLGINTDLATMVSVELT 260
Query: 256 ---ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
L+ MY+K+G L A +F++M ER++ +W +MI+G A G ++ ++ LF ++EKE
Sbjct: 261 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKED 320
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ PN IT +L AC ++ G++I G + R G +VD+ +CG L
Sbjct: 321 LFPNSITMACILPACASLAALERGQEIHGHILR-NGFSLDRHVANALVDMYLKCG-ALGL 378
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHG 399
L+ M+ + D+V W ++A HG
Sbjct: 379 ARLLFDMIPEKDLVSWTVMIAGYGMHG 405
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T SVL CA ++ G ++H ++ E+ +LG+ LV MY G L + + +FD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEK-------------EQIVPND-ITFVGV 323
+ WN +++G A G+ E+L LF+++ + +++ D I++ +
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY--------GCMVDLLGRCGKVLEAEEL 375
+S G + G +F M + GI + C++D+ + G + A ++
Sbjct: 223 ISGYVSNGLSEKGLDLFEQM-LLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQV 281
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ M + VV W +++A G +++ R+ E+
Sbjct: 282 FETM-GERSVVSWTSMIAGYAREGLSDMSVRLFHEM 316
>gi|356547105|ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 477
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 250/458 (54%), Gaps = 26/458 (5%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+S L K + +KQIHAQ+I + F A + +C S A +F
Sbjct: 11 ISFLYSLPKLSYNIKQIHAQLITNGLKSPTFWAKLIEHYCGSPDQHIASNAHLVFQYFDK 70
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-NQHTFTFVLKACS---NVRSLNC 133
P+ F++NTLIR + P+ I ++ N G +++T+ FVL AC+ + +L
Sbjct: 71 PDLFLFNTLIRC----VQPNDCILIFQNEFSRGLMYFDEYTYNFVLGACARSPSASTLWV 126
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+Q+H + K G + ++ V + Y+ + D+ +AR+VFDE+ R+ W MI+GY+
Sbjct: 127 GRQLHARIVKHGFESNILVPTTKIYFYASNKDIISARRVFDEMPRRSTVTWNAMITGYSS 186
Query: 194 SFRANE-----ALMLFDQMLMEG--FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
N+ AL LF ML++ +P T+ SVLSA +Q G LE G +H F +
Sbjct: 187 QKEGNKKYALNALSLFIDMLVDVSVIKPTGTTIVSVLSAVSQIGMLETGACIHGFAEKTV 246
Query: 247 F--EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
E +GT LV MY+K G L A ++F M ++NI TW AM + LA HG ++AL++
Sbjct: 247 CTPEDDVFIGTGLVDMYSKCGCLDSALSVFWRMNQKNILTWTAMTTSLAIHGKGKQALEV 306
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
K+ + PN+ TF LSACCH G ++ G +F MKR +G+ P+I+HYGC+VDLLG
Sbjct: 307 LYKMGAYGVKPNEATFTSFLSACCHGGLVEEGLILFHEMKRTFGMMPQIKHYGCIVDLLG 366
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE-------PN 417
R G + EA + I RM PD V+W +LL ACK HG++ + E+V K ++ LE P
Sbjct: 367 RAGNLEEAYDFIMRMPINPDAVIWRSLLGACKIHGDVVMGEKVGKFLLQLEEWSSAESPK 426
Query: 418 NHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAA 455
+ Y+ LSN+YA AE +EI+ + G+ S A
Sbjct: 427 SED-YIALSNVYALAEKWD-DVEIVRKTMKSKGILSKA 462
>gi|242062828|ref|XP_002452703.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
gi|241932534|gb|EES05679.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
Length = 622
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 233/413 (56%), Gaps = 11/413 (2%)
Query: 26 KSMHQLKQIHAQMII--SSRIQDHFAASRLLAFCALSS-SGDLSYATRLFNSIQSPNHFM 82
+S+ ++++ HA+ I R H A LLA CALS G + A +F S+ P F
Sbjct: 53 RSLDEVRKAHARHIKLGVDRCPRH--ARPLLAACALSGWPGGMELAASIFESLVEPEAFD 110
Query: 83 WNTLIRAQAS----SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+NTL+R P A+ LY++M G P+ +TF FVLKAC+ + SL +Q+
Sbjct: 111 YNTLMRGHVGGGRGDREPAAALRLYVDMLEAGVGPDSYTFPFVLKACAQLASLQQGRQLQ 170
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--RTLNVWTTMISGYAQSFR 196
H+ K GL D HV N L+ Y + AR FD + + RT W+ +++ Y ++
Sbjct: 171 AHIEKLGLQHDEHVQNSLISFYGKCGEPAMARLAFDRVEDEERTTASWSALLAAYTKAGL 230
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
E L F M+++G+ P+ ++ S +SACA G ++G +H + + I+ T+
Sbjct: 231 WGECLESFGAMVLDGWRPDESSMVSAISACAHLGAFDVGRSIHCALLRNTARLNTIMQTS 290
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
LV MY K G++ KA A+FD+M ++N ++AM+SGLA HG +AL +F + +E P+
Sbjct: 291 LVDMYAKCGSIEKAAAVFDAMDDKNAWAYSAMLSGLALHGDGRKALQVFDAMVREGHAPD 350
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+VGVL+AC AG ++ G + F M+ + P +HYGCMVDL+ R G++ +A LI
Sbjct: 351 AAAYVGVLNACSRAGLLEDGLRCFDRMRLEHKFAPNAQHYGCMVDLMARAGRLDDARALI 410
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
M P W +LL AC+ HG++++AE ++E+ +L N G YV++++M+
Sbjct: 411 GSMPTGPTDTAWRSLLNACRIHGDLDLAESALEELRSLGAANAGDYVIVADMH 463
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 220/374 (58%), Gaps = 1/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+L+ AT +F + W + I A AI L+ M+ G P+ +T T
Sbjct: 617 SKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVT 676
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
++ AC+ SL+ + +H++V K+G+ +L V N L+ Y+ + AR VF +I +
Sbjct: 677 SIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK 736
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W TMI GY+Q+ NEAL LF M + F+P+ +T+A VL ACA L+ G ++H
Sbjct: 737 DIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIH 795
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ RG+ + ALV MY K G L A+ LFD +P++++ +W MI+G HG
Sbjct: 796 GHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGN 855
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA+ F ++ I P++ +F +L+AC H+G ++ G + F SM+ G+EPK+EHY C+
Sbjct: 856 EAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACV 915
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R G + +A + I+ M KPD +WG LL+ C+ H ++++AE+V + I LEP+N
Sbjct: 916 VDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNT 975
Query: 420 GVYVVLSNMYAEAE 433
YVVL+N+YAEAE
Sbjct: 976 RYYVVLANVYAEAE 989
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 192/368 (52%), Gaps = 9/368 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A LF+ + P+ WN++I + + +++ M G + T VL
Sbjct: 519 GGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL 578
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
A +N+ +L+ + +H K+ ++ N L+ YS +LN A +VF ++ + T+
Sbjct: 579 VAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIV 638
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT+ I+ Y + ++A+ LFD+M +G P+ T+ S++ ACA S L+ G VH +V
Sbjct: 639 SWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 698
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + AL++MY K G++ +A+ +F +P ++I +WN MI G + + EAL
Sbjct: 699 IKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEAL 758
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYGC-MV 360
+LF ++K Q P+DIT VL AC +D GR+I G ++R Y + H C +V
Sbjct: 759 ELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL---HVACALV 814
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH--GNIEVAERVVKEIIALEPNN 418
D+ +CG ++ A +L+ M+ K D++ W ++A H GN ++ I +EP+
Sbjct: 815 DMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 873
Query: 419 HGVYVVLS 426
V+L+
Sbjct: 874 SSFSVILN 881
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 188/377 (49%), Gaps = 5/377 (1%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L A+K KS+ K++H+ +IIS+ I A L F ++ GDL ++F+ I +
Sbjct: 376 LQLCAEK-KSLEDGKRVHS-VIISNGISIDEALGAKLVFMYVNC-GDLVQGRKIFDKIMN 432
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
F+WN L+ A N +++ L+ M++ G N +TFT VLK + + + CK++
Sbjct: 433 DKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV 492
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H +V K G + VVN L+ Y + +A +FDE+ + W +MI+G + +
Sbjct: 493 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 552
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
L +F QML+ G E + TL SVL A A G L LG +H F F + L
Sbjct: 553 GNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTL 612
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ MY+K G L A +F M + I +W + I+ G +A+ LF +++ + + P+
Sbjct: 613 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDI 672
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
T ++ AC + +D GR + + + G+ + ++++ +CG V EA +
Sbjct: 673 YTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYAKCGSVEEARLVFS 731
Query: 378 RMVWKPDVVMWGALLAA 394
++ K D+V W ++
Sbjct: 732 KIPVK-DIVSWNTMIGG 747
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 4/285 (1%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
+++ VL+ C+ +SL K++H+ + +G+ +D + LV Y DL R++FD+
Sbjct: 370 NSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDK 429
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
I N + +W ++S YA+ E++ LF +M G N T VL A G ++
Sbjct: 430 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 489
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
++VH +V GF + +L+ Y K G + A LFD + E ++ +WN+MI+G +
Sbjct: 490 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 549
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIE 354
G + L++F ++ + + T V VL A + G + +GR + G +K + E +
Sbjct: 550 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEE--VV 607
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
++D+ +CG + A E+ +M +V W + +AA G
Sbjct: 608 FSNTLLDMYSKCGNLNGATEVFVKM-GDTTIVSWTSTIAAYVREG 651
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 223/397 (56%), Gaps = 9/397 (2%)
Query: 44 IQDHFAASRLLAFCALSSSGD---LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAI 100
I+ +F S L+A +S G + A +F + + W+ ++ + K +
Sbjct: 349 IRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCL 408
Query: 101 FLYMNMR---RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
LY M+ F + + + +CS + L + +H + K LD + + N L+
Sbjct: 409 ELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDEN-SITNSLI 467
Query: 158 RCYSVSSDLNNARQVFDEIR-NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
Y + A ++F + R + W +IS Y+ R+N+AL L+ QML E +PNS
Sbjct: 468 GMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNS 527
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
TL +V+SACA LE GE +H +VK G E + TALV MYTK G L A+ +FDS
Sbjct: 528 STLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDS 587
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
M +R++ TWN MISG HG A +AL LF ++E I PN +TF+ +LSACCHAG +D G
Sbjct: 588 MLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEG 647
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
R++F M Y +EP ++HY CMVDLLG+ G + EAE+L+ M KPD +WG LL+ACK
Sbjct: 648 RKLFIRMGG-YRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACK 706
Query: 397 NHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
H N E+ RV K+ + +P N G Y+++SN Y AE
Sbjct: 707 VHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAE 743
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 166/341 (48%), Gaps = 20/341 (5%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P P P ++LL +H L +SSR FAA + A+ SSSG +AT
Sbjct: 23 PSPPPLIALL-----RLHALASTSG---LSSR--PDFAAKLVSAY---SSSGLPGFATLA 69
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F++ P+ F+WN+L+R+ + + D A+ + MR +G P++ T A + + +L
Sbjct: 70 FSASPCPDTFLWNSLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAAL 129
Query: 132 NCCKQIHTHVSKSGL---DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
+H++ K GL D + V + LV Y+ L +A ++FDE+ R + WT ++
Sbjct: 130 PVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVV 189
Query: 189 SGYAQSFRANEALMLFDQMLM----EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
SG ++ + + QM+ G PNS T+ S L AC G L G +H +
Sbjct: 190 SGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVK 249
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G A++ +AL MY+K A LF + E+++ +W +I G A EA++L
Sbjct: 250 EGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVEL 309
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
F+++E+ + P+++ VLS + ++ G+ + R
Sbjct: 310 FQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIR 350
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 172/373 (46%), Gaps = 11/373 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR----TGFAPNQHTF 118
G L A +LF+ + + W ++ + K I + M R +G PN T
Sbjct: 165 GSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTM 224
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
L+AC + L+ + +H + K G+ VV+ L YS +A +F E+
Sbjct: 225 ESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTE 284
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ + WT +I Y + A EA+ LF +M G +P+ V ++ VLS S + G+
Sbjct: 285 KDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAF 344
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + R F ++ +L+ MY K + A +F + +R+ +W+ M++G G
Sbjct: 345 HAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLD 404
Query: 299 EEALDLFRKLE---KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
+ L+L+R+++ ++ + + + V +S+C G + +G+ + + E I +
Sbjct: 405 VKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDENSITN 464
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA-- 413
++ + GRCG A ++ + DVV W AL+++ + G A + +++
Sbjct: 465 S--LIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTED 522
Query: 414 LEPNNHGVYVVLS 426
++PN+ + V+S
Sbjct: 523 VKPNSSTLITVIS 535
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 229/400 (57%), Gaps = 7/400 (1%)
Query: 34 IHAQMIISSRIQDHFAASRLLAF---CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
IH + D F + L+A C L R+F+ + + WN L+
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA----VKRVFDLMDTKTVSSWNALLCGY 285
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A + +P KA+ LY+ M +G P+ T +L ACS ++SL+ ++IH ++GL +D
Sbjct: 286 AQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDP 345
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
+ L+ Y A+ +FD + +R+L W MI+GY+Q+ +EA+ LF QML +
Sbjct: 346 FIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD 405
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G +P + + V AC+Q L LG+++H F + ++++ MY K G + +
Sbjct: 406 GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLS 465
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ +FD + E+++A+WN +I+G HG +EAL+LF K+ + + P+D TF G+L AC HA
Sbjct: 466 QRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHA 525
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G ++ G + F M ++ IEPK+EHY C+VD+LGR G++ +A LI+ M PD +W +
Sbjct: 526 GLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSS 585
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
LL++C+ HGN+ + E+V +++ LEP YV++SN++A
Sbjct: 586 LLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 625
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 202/394 (51%), Gaps = 13/394 (3%)
Query: 32 KQIHAQMIISSRIQDHFAA-SRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+++H + S++ + F +R++ S G S + +F+ ++ N F WN ++ A
Sbjct: 125 RRLHEMVSASTQFCNDFVLNTRIITM--YSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAY 182
Query: 91 ASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ + A+ ++ + T P+ T V+KAC+ + L + IH +K L D
Sbjct: 183 TRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSD 242
Query: 150 LHVVNCLVRCYSVSSDLNNA-RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ V N L+ Y + A ++VFD + +T++ W ++ GYAQ+ +AL L+ QM
Sbjct: 243 VFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMT 302
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G +P+ T+ S+L AC++ L GE++H F G + +G +L+ +Y G
Sbjct: 303 DSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPF 362
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A+ LFD M R++ +WN MI+G + +G +EA++LFR++ + I P +I + V AC
Sbjct: 363 AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACS 422
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
+ +G+++ + + E I ++D+ + G + ++ + R+ K DV W
Sbjct: 423 QLSALRLGKELHCFALKAHLTE-DIFVSSSIIDMYAKGGCIGLSQRIFDRLREK-DVASW 480
Query: 389 GALLAACKNHGN----IEVAERVVKEIIALEPNN 418
++A HG +E+ E++++ + L+P++
Sbjct: 481 NVIIAGYGIHGRGKEALELFEKMLR--LGLKPDD 512
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 161/346 (46%), Gaps = 11/346 (3%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S L I L L + KS+H ++IH + + D F LL+ G
Sbjct: 304 SGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSL--YICCGKP 361
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A LF+ ++ + WN +I + + PD+AI L+ M G P + V AC
Sbjct: 362 FAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGAC 421
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S + +L K++H K+ L D+ V + ++ Y+ + ++++FD +R + + W
Sbjct: 422 SQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWN 481
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKM 244
+I+GY R EAL LF++ML G +P+ T +L AC+ +G +E G E + + +
Sbjct: 482 VIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNL 541
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGH---AEE 300
E T +V M + G + A L + MP + + W++++S HG+ E+
Sbjct: 542 HNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEK 601
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+ +LE E+ P + + L A +G D R++ G MK +
Sbjct: 602 VANKLLELEPEK--PENYVLISNLFA--GSGKWDDVRRVRGRMKDI 643
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 153/306 (50%), Gaps = 7/306 (2%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC-LVRCYSVSSDLNNAR 170
A +L+AC + + +++H VS S + V+N ++ YS+ +++R
Sbjct: 102 AQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSR 161
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQS 229
VFD++R + L W ++S Y ++ +A+ +F +++ + +P++ TL V+ ACA
Sbjct: 162 MVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGL 221
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA-KALFDSMPERNIATWNAM 288
L LG+ +H +G AL+ MY K G + +A K +FD M + +++WNA+
Sbjct: 222 LDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNAL 281
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVY 347
+ G A + +ALDL+ ++ + P+ T +L AC + G +I G +++
Sbjct: 282 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 341
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
++P I ++ L CGK A+ L M + +V W ++A +G + A +
Sbjct: 342 AVDPFIGI--SLLSLYICCGKPFAAQVLFDGMEHRS-LVSWNVMIAGYSQNGLPDEAINL 398
Query: 408 VKEIIA 413
+++++
Sbjct: 399 FRQMLS 404
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 221/382 (57%), Gaps = 39/382 (10%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S+SG + A ++F+ + + W T++ A L+ D A L M P ++ T
Sbjct: 922 SASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQM------PEKNEAT 975
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+ NCL+ Y+ +L A +F+++ +
Sbjct: 976 W---------------------------------NCLIDGYTRLGNLELAESLFNQMPVK 1002
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ WTTMI+GY+++ R EA+ +F +M+ EG P+ VT+++V+SACA G LE+G++VH
Sbjct: 1003 DIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1062
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
++ GF + +G+ALV MY+K G+L +A +F ++P++N+ WN++I GLA+HG A+
Sbjct: 1063 MYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ 1122
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL +F K+E E + PN +TFV V +AC HAG ++ GR+I+ SM Y I +EHYGCM
Sbjct: 1123 EALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCM 1182
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
V L + G + EA ELI M ++P+ V+WGALL C+ H N+E+AE +++ LEP N
Sbjct: 1183 VHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNS 1242
Query: 420 GVYVVLSNMYAEAESMKMQLEI 441
G Y +L +MYAE + EI
Sbjct: 1243 GYYFLLVSMYAEQNRWRDVAEI 1264
>gi|41469497|gb|AAS07282.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 476
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 228/438 (52%), Gaps = 35/438 (7%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M L+Q+HA ++ S +D AASR +AFCA D +YA RL PN FMWNT I
Sbjct: 1 MAHLRQLHAALVKSGLARDPIAASRAVAFCA-GDGRDAAYAARLVRHHPRPNAFMWNTAI 59
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
RA A P A+ L+++M + P + TF + A + + +H V K GL
Sbjct: 60 RALADGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLG 119
Query: 148 LDLHVVNC-----------------LVRCYSV--------------SSDLNNARQVFDEI 176
D +V N L RC + + ++ AR VFD +
Sbjct: 120 GDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALARAGRVDEARAVFDGM 179
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
RT+ W+ M+S Y++ R ++A+ LF M EG EPN+ L SVL CA G LE G
Sbjct: 180 PARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASLGALEQGA 239
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN---IATWNAMISGLA 293
VH ++ M A++ TALV MY K G + KA+ +FD+ R +++WN+M+ G A
Sbjct: 240 WVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGHA 299
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
HG EA LF +L + P+++TF+ +L A H+G D + + SM +G+ P +
Sbjct: 300 VHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLASMASEHGVVPGV 359
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGC+VD L R G++ EAE I M PD +WGALL+ C+ HG+ E A R +E +
Sbjct: 360 EHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGALLSGCRLHGDAEAAARAAREAVR 419
Query: 414 LEPNNHGVYVVLSNMYAE 431
+P + G YV+ ++ A
Sbjct: 420 CDPRDSGAYVLAASALAR 437
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 212/367 (57%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L + ++F N W+ +I A S + KA+ L+ M G P++ T VL
Sbjct: 261 GSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVL 320
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
ACS+ ++ KQ+H ++ K G + L+++ LV Y+ S +AR+ F+ ++ L
Sbjct: 321 NACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLV 380
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+WT+MI+GY Q+ +AL L+ +M MEG PN +T+ASVL AC+ + G ++H
Sbjct: 381 LWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHART 440
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + +G+AL MY K G L + +F MPER+I +WNAMISGL+ +G+ +EAL
Sbjct: 441 IKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEAL 500
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+LF ++ ++ P+D+TFV VLSAC H G +D G F M +G+ PK+EHY CMVD+
Sbjct: 501 ELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDV 560
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R GK+ EA+E I+ + +W LL AC+N+ N E+ ++++ L Y
Sbjct: 561 LSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAY 620
Query: 423 VVLSNMY 429
V+LS +Y
Sbjct: 621 VLLSGIY 627
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 201/381 (52%), Gaps = 6/381 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q HA I + D F S LL +C +G L A +F+ + N W T+I
Sbjct: 131 QQAHAVAIKMACFYDVFVGSSLLNMYC---KAGLLFEAREVFDRMPERNEVTWATMISGY 187
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A +A ++ MRR N+ FT VL A + ++ KQIH K+GL + L
Sbjct: 188 AIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFL 247
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
++N LV Y+ L+++ QVF+ ++ W+ MI+GYAQS +++AL LF +M
Sbjct: 248 SILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFA 307
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G P+ TL VL+AC+ + +E G++VH ++ GFE + TALV MY K+G A
Sbjct: 308 GINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDA 367
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ F+ + + ++ W +MI+G +G E+AL L+ +++ E I+PN++T VL AC +
Sbjct: 368 RKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNL 427
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
D GRQI + YG+ ++ + + +CG + E + +RM + D++ W A
Sbjct: 428 AAFDQGRQIHARTIK-YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMP-ERDIISWNA 485
Query: 391 LLAACKNHGNIEVAERVVKEI 411
+++ +G + A + +E+
Sbjct: 486 MISGLSQNGYGKEALELFEEM 506
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 194/383 (50%), Gaps = 9/383 (2%)
Query: 26 KSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
KS+ + + +HAQ+I ++S + A+ L+ F A L A +F+ I + + WN
Sbjct: 21 KSLQKGRALHAQIIKLASSSSCIYLANSLINFYA--KCCHLPKAKLVFDRIHNKDVISWN 78
Query: 85 TLIRAQASSLNPDKAIF---LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
LI S P + F L+ MR PN HTF+ + A SN+ S+ +Q H
Sbjct: 79 CLINGY-SQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVA 137
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K D+ V + L+ Y + L AR+VFD + R W TMISGYA A EA
Sbjct: 138 IKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAF 197
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
+F+ M E + N SVLSA A ++ G+++H G + + ALV MY
Sbjct: 198 EVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMY 257
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G+L + +F+ ++N TW+AMI+G A G + +AL LF ++ I P++ T V
Sbjct: 258 AKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLV 317
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL+AC A ++ G+Q+ + ++ G E ++ +VD+ + G +A + +
Sbjct: 318 GVLNACSDACAVEEGKQVHNYLLKL-GFESQLYIMTALVDMYAKSGVTEDARKGFNYL-Q 375
Query: 382 KPDVVMWGALLAACKNHGNIEVA 404
+PD+V+W +++A +G E A
Sbjct: 376 QPDLVLWTSMIAGYVQNGENEDA 398
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 246/487 (50%), Gaps = 73/487 (14%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL + CK++ L QIH I D + +L+ CA+S S L YA RL
Sbjct: 9 LSLL-NSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 78 PNHFMWNTLIRAQASS------------------LNPDKAIFLYM-----NMR--RTGFA 112
P+ FM+NTL+R + S + PD F ++ N R RTGF
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 113 ------------------------------------------PNQHTFTFVLKACSNVRS 130
PN + V+ AC
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
+ ++I + L + N ++ Y + +L +A+++F E+ +R W+TMI G
Sbjct: 188 VAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
A + NE+ + F ++ G PN V+L VLSAC+QSG E G+ +H FV+ G+
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI 303
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ AL+ MY++ G + A+ +F+ M E R I +W +MI+GLA HG EEA+ LF ++
Sbjct: 304 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ P+ I+F+ +L AC HAG I+ G F MKRVY IEP+IEHYGCMVDL GR GK+
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
+A + I +M P ++W LL AC +HGNIE+AE+V + + L+PNN G V+LSN Y
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 430 AEAESMK 436
A A K
Sbjct: 484 ATAGKWK 490
>gi|357131027|ref|XP_003567145.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 487
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 249/447 (55%), Gaps = 16/447 (3%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
L+ SS QPP L + + C S+ L + ++ + A F A
Sbjct: 9 LRPSSATQPPAVTRTLHAI-NTCTSVAALAPLRGAILREPALLRSTAVVSAF-FLACGRL 66
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIR----AQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
L A LF S+ P+ F++N+++R A SS P FL + +R PN++TF
Sbjct: 67 RHLDPALSLFASLSRPHVFVFNSILRSLHPASGSSPLPLFRRFLCLGVR-----PNRYTF 121
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV-SSDLNNARQVFDEIR 177
+L + S++ L + +H+ V+KSG DLHV N L+ Y+ D+ +A Q+FDE+
Sbjct: 122 PLLLTSLSSLCDL---RAVHSQVTKSGFARDLHVRNALLARYAACDPDVAHAEQLFDEMA 178
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ WTT+I+ Y R+ +AL F +ML PN VT+ + L AC G +E G
Sbjct: 179 LPDVVAWTTVITSYKNRGRSFQALATFRRMLAASVAPNRVTMVAALGACGAHGAIESGTW 238
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H +V+ +G+++ +LGTALV MY K G +A+A LF M ERN+ TWNA+I L
Sbjct: 239 IHEYVEKQGWDLDVVLGTALVDMYGKCGHVAEAARLFTEMVERNVYTWNAIIGALVLAQD 298
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHY 356
+ AL F ++E + + P+ +T + L AC HAGF+D GR+IF + + YG +P ++H+
Sbjct: 299 STRALQWFYRMEADGVQPDAVTLICALCACAHAGFVDTGRKIFNLIAQGEYGFQPGVKHF 358
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GC+VDLL R G + +A +++ M +P V+WG LL CK HG+ ++E V+ ++ LEP
Sbjct: 359 GCLVDLLSRSGHLDDAFTVVQTMPSQPSAVIWGLLLRGCKAHGDSSLSEHVLTRLVELEP 418
Query: 417 NNHGVYVVLSNMYAEAESMKMQLEILL 443
N YV+LSN+YAE + E+LL
Sbjct: 419 ENASHYVLLSNLYAETGRWQEAEEVLL 445
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 233/418 (55%), Gaps = 3/418 (0%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
I L L + +S+ + +QIHA +I S L+ F + + LS +++F
Sbjct: 57 ICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLS--SQVFEE 114
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ + W+++I + A + P AI + M P+ H F KAC+ + +
Sbjct: 115 SERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVG 174
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
K +H V K+G D+D+ V + LV Y+ D+ AR VFDE+ +R + W+ MI GY Q
Sbjct: 175 KSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQL 234
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EA+ LF + L+EG + N TL+SV+ C + LELG+++H +++ +G
Sbjct: 235 GEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVG 294
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
++L+ +Y+K G + A +FD +P +N+ WNAM+ A H H +EA DLF K+E +
Sbjct: 295 SSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMR 354
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN ITF+ VL AC HAG ++ G++ F MK+ Y IEP +HY MVDLLGR GK+ EA
Sbjct: 355 PNFITFLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALS 413
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+IK M +P +WGA + C+ HGN ++A ++ L + G++V+LSN YA A
Sbjct: 414 VIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAA 471
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 217/403 (53%), Gaps = 4/403 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+HA + + +I D F AF S +G A ++F+ + N WN +
Sbjct: 128 KQVHALAVKAGQISDVFVGCS--AFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSV 185
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
D A+ ++ R G+ PN TF L AC+ L +Q+H V +SG + D+
Sbjct: 186 LEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVS 245
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y + + +F I W +MI Y Q+ +A ++F + EG
Sbjct: 246 VANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEG 305
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP ++SVLSACA LE+G+ VH +G+ALV MY K G++ A+
Sbjct: 306 IEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAE 365
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE--KEQIVPNDITFVGVLSACCH 329
FD MPERN+ TWNAMI G A G A+ A+ LF ++ ++ PN +TFV VLSAC
Sbjct: 366 RAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSR 425
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
AG ++VG +IF SM+ YGIEP EHY C+VDLLGR G V +A + IK+M +P V +WG
Sbjct: 426 AGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWG 485
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
ALL A K G E+ + + L+P + G +V+LSNM+A A
Sbjct: 486 ALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAA 528
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 174/372 (46%), Gaps = 9/372 (2%)
Query: 77 SPNH--FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+PN W LI + A+F + NMRR PN TF KA ++RS
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
KQ+H K+G D+ V YS + AR++FDE+ R + W +S
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
R ++AL F + EG+EPN +T + L+ACA + L LG ++H FV GFE +
Sbjct: 188 GRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVA 247
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
L+ Y K + ++ +F + + N +W +MI + E+A +F + KE I
Sbjct: 248 NGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIE 307
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P D VLSAC ++VG+ + ++ + I +VD+ G+CG + +AE
Sbjct: 308 PTDFMVSSVLSACAGLSVLEVGKSVH-TLAVKACVVGNIFVGSALVDMYGKCGSIEDAER 366
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA----LEPNNHGVYVVLSNMYA 430
M + ++V W A++ + G ++A + E+ + P N+ +V + + +
Sbjct: 367 AFDEMPER-NLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAP-NYVTFVCVLSACS 424
Query: 431 EAESMKMQLEIL 442
A S+ + +EI
Sbjct: 425 RAGSVNVGMEIF 436
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 142/298 (47%), Gaps = 11/298 (3%)
Query: 135 KQIHTHVSKSGLD--LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+ H + K+ LD L + N LV YS N+A+ + NR++ WT +I+G
Sbjct: 26 RAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSV 84
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
Q+ R AL F M + +PN T A +G++VH G
Sbjct: 85 QNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVF 144
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+G + MY+K G +A+ +FD MPERNIATWNA +S G ++AL F + E
Sbjct: 145 VGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEG 204
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
PN ITF L+AC A ++ +GRQ+ G + + G E + ++D G+C +V
Sbjct: 205 WEPNLITFCAFLNACAGASYLRLGRQLHGFVLQ-SGFEADVSVANGLIDFYGKCHQV-GC 262
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVA----ERVVKEIIALEPNNHGVYVVLS 426
E+I + KP+ V W +++ + + E A R KE +EP + V VLS
Sbjct: 263 SEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKE--GIEPTDFMVSSVLS 318
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 212/379 (55%), Gaps = 9/379 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+++Y R+F I N W +LI ++ AI + M+ G N+ +L
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLD--------LDLHVVNCLVRCYSVSSDLNNARQVFD 174
AC + + K H + G D ++ + L+ Y+ DL AR +FD
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
+ RTL W ++I+GY+Q+ A EAL +F ML G P+ VT SV+ A GC +L
Sbjct: 276 GMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL 335
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G+ +H +V GF A + ALV+MY K G AK F+ + +++ W +I GLAS
Sbjct: 336 GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLAS 395
Query: 295 HGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
HGH EAL +F+++ EK P+ IT++GVL AC H G ++ G++ F M+ ++G+EP +
Sbjct: 396 HGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTV 455
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGCMVD+L R G+ EAE L+K M KP+V +WGALL C H N+E+ +R+ +
Sbjct: 456 EHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAE 515
Query: 414 LEPNNHGVYVVLSNMYAEA 432
E G+YV+LSN+YA+A
Sbjct: 516 PEELGSGIYVLLSNIYAKA 534
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 216/394 (54%), Gaps = 12/394 (3%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNS 74
P LS L + C+S+ +L Q+H MI SS I++ SRL+ FC + +LSYA +F S
Sbjct: 8 PILSQL-ENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I P+ ++WN++IR ++S NPDKA+ Y M R G++P+ TF +VLKACS +R +
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+H V K+G +++++V CL+ Y ++N +VF++I + W ++ISG+ +
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE------ 248
R ++A+ F +M G + N + +L AC + + G+ H F++ GF+
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 249 --MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
IL T+L+ MY K G L A+ LFD MPER + +WN++I+G + +G AEEAL +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+ I P+ +TF+ V+ A G +G+ I + + G +V++ +
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKT 365
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
G A++ + + K D + W ++ +HG+
Sbjct: 366 GDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGH 398
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 119/290 (41%), Gaps = 49/290 (16%)
Query: 1 MSLKCSSLRQPPLPIPPLSLL-ADKCKSMHQLKQ-IHAQMIISSRIQDHFAASRLLAFCA 58
M L L P + LS++ A + QL Q IHA + + ++D L+ A
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 363
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHT 117
+GD A + F ++ + W +I AS + ++A+ ++ M+ G A P+ T
Sbjct: 364 --KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ VL ACS++ GL + ++ F E+R
Sbjct: 422 YLGVLYACSHI----------------GL-------------------VEEGQRYFAEMR 446
Query: 178 NR-----TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
+ T+ + M+ +++ R EA L M + +PN ++L+ C L
Sbjct: 447 DLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV---KPNVNIWGALLNGCDIHENL 503
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
EL +++ V E+G+ + L ++Y K G A K + +SM + +
Sbjct: 504 ELTDRIRSMVA-EPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRV 552
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 225/374 (60%), Gaps = 2/374 (0%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A S G + A ++F+ + + WNT+I + +A+ ++ MR GF ++ T
Sbjct: 107 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFT 166
Query: 118 FTFVLKAC-SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
+ VL AC +N +L C K++H K+ LDL+L+V L+ Y+ +N+A QVF+ +
Sbjct: 167 ISSVLSACGANCDALEC-KKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESM 225
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
++++ W++M++GY QS EAL+L+ + E N TL+SV+ AC+ L G+
Sbjct: 226 QDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 285
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++H ++ GF + ++ V MY K G+L ++ +F + E+NI WN +ISG A H
Sbjct: 286 QMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHA 345
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+E + LF K++++ + PN++TF +LS C H G ++ GR+ F M+ YG+ P + HY
Sbjct: 346 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 405
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
CMVD+LGR G + EA ELIK + ++P +WG+LLA+C+ N+E+AE K++ LEP
Sbjct: 406 SCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEP 465
Query: 417 NNHGVYVVLSNMYA 430
N G +V+LSN+YA
Sbjct: 466 ENAGNHVLLSNIYA 479
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 164/323 (50%), Gaps = 16/323 (4%)
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF-VLKACSNVRSLNCC---------KQI 137
R+ SSL+ + ++F + + +P +++ F V++A + L C K
Sbjct: 28 RSNTSSLSRNISVF--ASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKAC 85
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + L D+ + N L+ YS + ARQVFD + R+L W TMI Y ++
Sbjct: 86 HGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 145
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSAC-AQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+EAL +F +M EGF+ + T++SVLSAC A LE +K+H ++ +GTA
Sbjct: 146 SEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALEC-KKLHCLSMKTSLDLNLYVGTA 204
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ +Y K G + A +F+SM +++ TW++M++G + EEAL L+R+ ++ + N
Sbjct: 205 LLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQN 264
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
T V+ AC + + G+Q+ +++ G + VD+ +CG + E+ +I
Sbjct: 265 QFTLSSVICACSNLAALIEGKQMHAVIRKS-GFGSNVFVASSAVDMYAKCGSLRES-YII 322
Query: 377 KRMVWKPDVVMWGALLAACKNHG 399
V + ++ +W +++ H
Sbjct: 323 FSEVQEKNIELWNTIISGFAKHA 345
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 224/390 (57%), Gaps = 4/390 (1%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+D F + L + S GDL A +F + + + ++I A +A+ L+
Sbjct: 330 EDRFCNTLLDMY---SKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M G +P+ +T T VL C+ R L+ K++H + ++ + D+ V N L+ Y+
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCG 446
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVL 223
+ A VF E+R + + W T+I GY+++ ANEAL LF+ +L+E F P+ T+A VL
Sbjct: 447 SMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVL 506
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
ACA + G ++H ++ G+ + +LV MY K GAL A+ LFD + +++
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLV 566
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+W MI+G HG +EA+ LF ++ + I P++I+FV +L AC H+G +D G + F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ IEP +EHY C+VD+L R G + +A I+ M PD +WGALL C+ H ++++
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
AERV +++ LEP N G YV+++N+YAEAE
Sbjct: 687 AERVAEKVFELEPENTGYYVLMANIYAEAE 716
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 198/386 (51%), Gaps = 7/386 (1%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P L L AD KS+ K++ + + + D S+L ++ GDL A+
Sbjct: 93 DPRTLCSVLQLCADS-KSLKDGKEVDNFIRGNGFVLDSNLGSKLALM--YTNCGDLKEAS 149
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
R+F+ ++ WN L+ A S + +I L+ M +G + +TF+ V K+ S++R
Sbjct: 150 RVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
S+N +Q+H ++ KSG V N LV Y + +++AR+VFDE+ R + W ++I+
Sbjct: 210 SVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIIN 269
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY + A + L +F QML G E + T+ SV + CA S + LG VH F F
Sbjct: 270 GYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSR 329
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
L+ MY+K G L AK +F M R++ ++ +MI+G A G A EA+ LF ++E
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGCMVDLLGRCGK 368
+E I P+ T VL+ C +D G+++ +K G + + + ++D+ +CG
Sbjct: 390 EEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN--ALMDMYAKCGS 447
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAA 394
+ EAE + M K D++ W ++
Sbjct: 448 MREAELVFSEMRVK-DIISWNTVIGG 472
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 195/375 (52%), Gaps = 5/375 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S++ +Q+H ++ S + + + L+AF + D A ++F+ + + WN+
Sbjct: 209 RSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVD--SARKVFDEMTERDVISWNS 266
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I S+ +K + +++ M +G + T V C++ R ++ + +H K+
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKAC 326
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ N L+ YS DL++A+ VF E+ R++ +T+MI+GYA+ A EA+ LF+
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EG P+ T+ +VL+ CA++ L+ G++VH ++K + AL+ MY K G
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCG 446
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPNDITFVGVL 324
++ +A+ +F M ++I +WN +I G + + +A EAL LF L E+ P++ T VL
Sbjct: 447 SMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVL 506
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC D GR+I G + R G +VD+ +CG +L A L + K D
Sbjct: 507 PACASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSK-D 564
Query: 385 VVMWGALLAACKNHG 399
+V W ++A HG
Sbjct: 565 LVSWTVMIAGYGMHG 579
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 173/347 (49%), Gaps = 10/347 (2%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NT +R S N A+ L + P T VL+ C++ +SL K++ +
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+G LD ++ + L Y+ DL A +VFD+++ W +++ A+S + ++ L
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F +M+ G E +S T + V + + + GE++H ++ GF +G +LV Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
N + A+ +FD M ER++ +WN++I+G S+G AE+ L +F ++ I + T V V
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSV 302
Query: 324 LSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
+ C + I +GR + FG +K + E + ++D+ +CG + A+ + + M
Sbjct: 303 FAGCADSRLISLGRAVHCFG-VKACFSREDRF--CNTLLDMYSKCGDLDSAKVVFREMSG 359
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVLS 426
+ VV + +++A G A ++ +E+ + P+ + V VL+
Sbjct: 360 RS-VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/378 (39%), Positives = 217/378 (57%), Gaps = 3/378 (0%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
A GDL A +F +I + + WN++ +A A A Y M R F P+
Sbjct: 793 AYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDL 852
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
TF + +C N ++L + IH+H G D D+ +N + YS S D +AR +FD
Sbjct: 853 STFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDI 912
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ +RT WT MISGYA+ +EAL LF M G P+ VTL S++S C + G LE+G
Sbjct: 913 MPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIG 972
Query: 236 EKVHVFVKMRGFEMGAIL-GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
+ + M G + ++ AL+ MY+K G++ +A+ +FD+ E+ + TW MI+G A
Sbjct: 973 KWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYAL 1032
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
+G EA++LF K+ PN ITF+ VL AC H+G ++ G + F MK+VY I P ++
Sbjct: 1033 NGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD 1092
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HY CMVDLLGR GK+ EA ELI M KPD +WGALL+ACK H N+++AE+ + L
Sbjct: 1093 HYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAADSLFNL 1152
Query: 415 EPNNHGVYVVLSNMYAEA 432
EP YV +SN+YA A
Sbjct: 1153 EPQMAAPYVEMSNIYAAA 1170
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 216/509 (42%), Gaps = 74/509 (14%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H +I S D F + + S L YA ++F + + WN ++ S
Sbjct: 670 VHTHLIKSPFWSDVFVGTATVDMFVKCDS--LDYAAKVFERMPVRDATTWNAMLSGFCQS 727
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+ DK L+ MR P+ T ++++ S +SL K +H + G+DL V
Sbjct: 728 GHTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVS 787
Query: 154 NCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
N + Y DL++A+ VF+ I +RT+ W ++ +A A +A + ML +
Sbjct: 788 NTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDE 847
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+P+ T ++ ++C L G +H G + + MY+K+G A+
Sbjct: 848 FKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSAR 907
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LFD MP R +W MISG A G +EAL LF + K + P+ +T + ++S C G
Sbjct: 908 LLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFG 967
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGC----------MVDLLGRCGKV------------ 369
+++G+ I G + + YGC ++D+ +CG +
Sbjct: 968 SLEIGKWIDG----------RADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSE 1017
Query: 370 -------------------LEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEVAER- 406
LEA EL +M+ +KP+ + + A+L AC + G++E
Sbjct: 1018 KTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEY 1077
Query: 407 --VVKEIIALEPN-NHGVYVVLSNMYAEAESMKMQLEILLVQV------LFAGLASAADI 457
++K++ + P +H Y + ++ + LE++ ++ L SA I
Sbjct: 1078 FHIMKQVYNISPGLDH--YSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKI 1135
Query: 458 LQNPDFESPPT----NLTPNRSTPFVLLN 482
+N NL P + P+V ++
Sbjct: 1136 HRNVKIAEQAADSLFNLEPQMAAPYVEMS 1164
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 159/324 (49%), Gaps = 4/324 (1%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN +R + +P +++ L+ M+R GF PN TF FV KAC+ + + C+ +HTH+
Sbjct: 616 WNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVHTHLI 675
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
KS D+ V V + L+ A +VF+ + R W M+SG+ QS ++
Sbjct: 676 KSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKVFS 735
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF +M ++ P+SVT+ +++ + + L+L + +H F G ++ A + + Y
Sbjct: 736 LFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYG 795
Query: 263 KNGALAKAKALFDSMP--ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
K G L AK +F+++ +R + +WN++ A G A +A +R + +++ P+ TF
Sbjct: 796 KCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTF 855
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+ + ++C + + GR I + G + IE + + + G A L M
Sbjct: 856 INLAASCQNPQTLTQGRLIHSHAIHL-GTDQDIEAINTFISMYSKSGDSCSARLLFDIMP 914
Query: 381 WKPDVVMWGALLAACKNHGNIEVA 404
+ V W +++ G+++ A
Sbjct: 915 SRT-CVSWTVMISGYAEKGDMDEA 937
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 239/426 (56%), Gaps = 12/426 (2%)
Query: 25 CKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI-QSPNH 80
C S+ LK+ IH++ + Q + LL A G+L A +FN + Q N
Sbjct: 354 CASLGALKEGKAIHSR-VFECGFQSLVVHTALLTMYA--KCGELDAARAVFNRVRQKRNV 410
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+ W +I A A + + +A+ LY M G PN++TF+ VL ACS+ L +IH H
Sbjct: 411 YCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGH 470
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
V S L ++ V N LV Y+ L A+ F+ + L W MI YAQ EA
Sbjct: 471 VENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREA 530
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGTALVH 259
L L+ M +G P+ VT+AS LSACA SG L+LG ++H V K + F ++ TALV+
Sbjct: 531 LDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVN 590
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY + G L A+++F+ M +R++ +W AM S A GHA++ LDL+ ++ I PN+IT
Sbjct: 591 MYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEIT 650
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F +L C HAG + G + F M+ + + P EH+ CMVDLLGR G++ +AE L++ M
Sbjct: 651 FTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESM 710
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA----ESM 435
++PD V W +L +CK H + + A+R + + L+P N +Y +LS+++ A E++
Sbjct: 711 PYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEAL 770
Query: 436 KMQLEI 441
++QL +
Sbjct: 771 EVQLSM 776
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 203/375 (54%), Gaps = 10/375 (2%)
Query: 27 SMHQLKQIHAQMIISSRI-QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
S+ + ++IHA +I + +I +D+ + L G + A ++F+ I++ + W +
Sbjct: 159 SLREAREIHASIIEAPQIIRDNLSLQNALVN-MYGKCGSVEEARKVFDGIKNRDAVSWTS 217
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + A++ D+A+ LY M G P+ TFT L AC+ + K IH + S
Sbjct: 218 MISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSN 274
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
++ D V + L+ Y+ D+++ARQ F++I+N+ + WT++++ Y Q+ EAL L+
Sbjct: 275 MESDF-VGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYG 333
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EG + VT + L ACA G L+ G+ +H V GF+ ++ TAL+ MY K G
Sbjct: 334 RMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCG 392
Query: 266 ALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
L A+A+F+ + + RN+ W AMIS A GH +EAL+L+ ++ E PN+ TF VL
Sbjct: 393 ELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVL 452
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
+AC +G ++ G +I G ++ + + +V + +CG LE + + D
Sbjct: 453 AACSSSGDLEAGMKIHGHVENSE-LASNVAVQNALVTMYAKCGS-LELAKSAFEASGRKD 510
Query: 385 VVMWGALLAACKNHG 399
+V W A++ A HG
Sbjct: 511 LVSWNAMIGAYAQHG 525
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 207/407 (50%), Gaps = 17/407 (4%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM-WNT 85
S+ + K +H ++ + ++ F + L+ + G++ A F + S +N
Sbjct: 57 SLAEGKLVHRHLLRTGHGRNQFLGNLLIQM--YGNCGEIHLARAAFQNFASIKAVACYNQ 114
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
++ A + ++A+ LY M G P++ T+ VL +CS V SL ++IH + ++
Sbjct: 115 MLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAP 174
Query: 146 --LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+ +L + N LV Y + AR+VFD I+NR WT+MIS YA + +EAL L
Sbjct: 175 QIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDL 234
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
+ QM +G +P+S+T S L AC + L G+ +H + E +G+AL++MY +
Sbjct: 235 YQQMDADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSNME-SDFVGSALINMYAR 290
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G ++ A+ F+ + +++ W ++++ H EALDL+ +++ E + + +T+V
Sbjct: 291 CGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTA 350
Query: 324 LSACCHAGFIDVGRQIFGSMKRVY--GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
L AC G + G+ I RV+ G + + H ++ + +CG++ A + R+
Sbjct: 351 LGACASLGALKEGKAIH---SRVFECGFQSLVVHTA-LLTMYAKCGELDAARAVFNRVRQ 406
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
K +V W A+++A G+ + A + +++A PN + VL+
Sbjct: 407 KRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLA 453
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 153/299 (51%), Gaps = 22/299 (7%)
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
++ RR G+ + +L+ C + SL K +H H+ ++G + + N L++ Y
Sbjct: 34 LDQRRHGYVE---LYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNC 90
Query: 164 SDLNNARQVFDEIRN-RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+++ AR F + + + + M+S Y ++ N AL L+ +M EG EP+ +T V
Sbjct: 91 GEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIV 150
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAI------LGTALVHMYTKNGALAKAKALFDS 276
L +C+ G L ++H + E I L ALV+MY K G++ +A+ +FD
Sbjct: 151 LGSCSAVGSLREAREIHASI----IEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDG 206
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+ R+ +W +MIS A++G +EALDL+++++ + I P+ ITF L AC +D G
Sbjct: 207 IKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLAC--TKLVD-G 263
Query: 337 RQIFGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ I R+ + + G ++++ RCG V A + ++ + VV W +L+ A
Sbjct: 264 KAIHA---RIVSSNMESDFVGSALINMYARCGDVSSARQAFEK-IQNKHVVCWTSLMTA 318
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 243/416 (58%), Gaps = 3/416 (0%)
Query: 21 LADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSS-SGDLSYATRLFNSIQSP 78
L +C ++ + KQ+HA+ I +S F+AS +LA CA S ++YA +F I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
F +NT+IR + ++ ++A+ Y M + G P+ T+ +LKAC+ ++S+ KQIH
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V K GL+ D+ V N L+ Y ++ + VF+++ ++T W++M+S A +
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 199 EALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
E L+LF M E + + S L ACA +G L LG +H F+ E+ I+ T+L
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G L KA +F M +RN T++AMISGLA HG E AL +F K+ KE + P+
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+ +V VL+AC H+G + GR++F M + +EP EHYGC+VDLLGR G + EA E I+
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ + + V+W L+ C+ NIE+ + +E++ L +N G Y+++SN+Y++ +
Sbjct: 396 SIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 13/282 (4%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L + KS+ + KQIH Q+ D F + L+ G++ ++ +F +
Sbjct: 136 PCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINM--YGRCGEMELSSAVFEKL 193
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+S W++++ A+A + + L+ M T + L AC+N +LN
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
IH + ++ +L++ V LV Y L+ A +F ++ R ++ MISG A
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
AL +F +M+ EG EP+ V SVL+AC+ SG ++ G + VF +M + G +
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRR--VFAEM--LKEGKVEP 369
Query: 255 TA-----LVHMYTKNGALAKAKALFDSMP-ERNIATWNAMIS 290
TA LV + + G L +A S+P E+N W +S
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 237/434 (54%), Gaps = 38/434 (8%)
Query: 34 IHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS---PNHFMWNTLIRA 89
+HA ++ + H A+S +L + A GD + A L ++ + +WN LI
Sbjct: 41 VHAHVVKFGMELNAHVASSLVLMYAA---RGDGAVARTLLDAWPARGGDTPVVWNALISG 97
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
S + +++M RTG P T+ VL AC + + Q+H V SG+ D
Sbjct: 98 HRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPD 157
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFD--EIRN--------------------RTLN----- 182
L V N L+ Y+ S+++ A ++F+ E+RN RTL
Sbjct: 158 LKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPE 217
Query: 183 ----VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
WT MI GY Q+ + EAL +F +M + T+ SV++ACAQ G LE GE
Sbjct: 218 RDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWA 277
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
+++ G +M +G ALV MY+K G++ +A +F M R+ TW A+I GLA +GH
Sbjct: 278 RIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHG 337
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EEA+++F ++ + P+++TF+GVL+AC HAG +D GR F SM YGI P + H+GC
Sbjct: 338 EEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGC 397
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
++DLLGR GK+ EA E I M +P+ +WG LLAAC+ HGN E+ + + ++ L+ N
Sbjct: 398 LIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTEN 457
Query: 419 HGVYVVLSNMYAEA 432
VY++LSN+YA++
Sbjct: 458 GMVYILLSNLYAKS 471
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 155/338 (45%), Gaps = 37/338 (10%)
Query: 102 LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC-KQIHTHVSKSGLDLDLHVVNCLVRCY 160
+Y+ M G P+ +TF +LKA + +H HV K G++L+ HV + LV Y
Sbjct: 5 VYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMY 64
Query: 161 SVSSDLNNARQVFDEIRNR---TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
+ D AR + D R T VW +ISG+ +S + + F M+ G P V
Sbjct: 65 AARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPV 124
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT--------------- 262
T +VLSAC + + LG +VH V G +G AL+ MY
Sbjct: 125 TYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGM 184
Query: 263 ----------------KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
+ G + +A+ LFD MPER+ +W AMI G G EAL++FR
Sbjct: 185 EVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFR 244
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+++ ++ ++ T V V++AC G ++ G M R +GI+ +VD+ +C
Sbjct: 245 EMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSR-HGIKMDTFVGNALVDMYSKC 303
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
G + +A + K M + D W A++ +G+ E A
Sbjct: 304 GSIQQALGVFKEMYIR-DKFTWTAVILGLAVNGHGEEA 340
>gi|326504712|dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 658
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 222/406 (54%), Gaps = 36/406 (8%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTF 120
+G L A +F I + W T+I + +A+ Y+ M N
Sbjct: 223 AGMLPMAAEVFGRIPERDAVSWLTIIDGYIRADCTSEALRAYVAMMAEVDTRGNAALLVD 282
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL-------------- 166
++K C+ ++ +Q+HT + K G D V L+ Y S DL
Sbjct: 283 LIKVCARHAAVLEGQQLHTVILKDGFDAHPFVQATLIHFYG-SCDLLDIARMQFKLSDKS 341
Query: 167 ------------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ ARQ+FD++ R W+T++SGY QS +N+AL LF ML
Sbjct: 342 HIASWNALMSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGYVQSGHSNKALQLFYLML 401
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G EPN VTLAS LSA A SG LE G +H ++ ++ L L+ MY K G++A
Sbjct: 402 GAGVEPNDVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDMYAKCGSVA 461
Query: 269 KAKALFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A LF + + +++ WNA+I LA HGHA +L+LF +L++ I PN +T++GVL+A
Sbjct: 462 DAIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQRTNIKPNSVTYIGVLNA 521
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCHAG + GR F SM R YGI+P I+HYGCMVDLLGR G + EAE LI+ M + DVV
Sbjct: 522 CCHAGLVTEGRHHFESMSREYGIQPTIKHYGCMVDLLGRAGHLEEAENLIQMMPMRSDVV 581
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG++LAA + HGN+ + E+ +E+ ++PN+ V LSN++AEA
Sbjct: 582 IWGSILAAARTHGNVALGEKAAEELAKIDPNHGASKVALSNIFAEA 627
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 188/445 (42%), Gaps = 77/445 (17%)
Query: 44 IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY 103
++D A + LLA +L+ +G L A + + + + T++ A A + + + A+ ++
Sbjct: 75 LRDPAAHNTLLA--SLARAGRLDLAQGMLAEMPQRDTVSYTTVLTALARAGHAEDAVAVF 132
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
M PN+ T VL A + R H + GL+ L V LV Y+ +
Sbjct: 133 RGMLAQDVPPNEVTLAGVLTALALERPPVPVGVAHGVTVRRGLNGFLIVATNLVHAYAAA 192
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQS----------------------------F 195
S + AR++F+++ ++ W M++GY ++
Sbjct: 193 SQVCFAREIFEQMPDKNTVTWNAMLNGYLKAGMLPMAAEVFGRIPERDAVSWLTIIDGYI 252
Query: 196 RAN---EALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
RA+ EAL + M+ E N+ L ++ CA+ + G+++H + GF+
Sbjct: 253 RADCTSEALRAYVAMMAEVDTRGNAALLVDLIKVCARHAAVLEGQQLHTVILKDGFDAHP 312
Query: 252 ILGTALVHMYTK--------------------------NGALAK-----AKALFDSMPER 280
+ L+H Y +G L + A+ LFD MPER
Sbjct: 313 FVQATLIHFYGSCDLLDIARMQFKLSDKSHIASWNALMSGLLHRNLMHEARQLFDDMPER 372
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
+ +W+ ++SG GH+ +AL LF + + PND+T LSA +G ++ GR I
Sbjct: 373 DTISWSTLLSGYVQSGHSNKALQLFYLMLGAGVEPNDVTLASTLSAVADSGMLEQGRFIH 432
Query: 341 GSMKRVYGIEPKIEHY----GCMVDLLGRCGKVLEAEELIKRMVWK-PDVVMWGALLAAC 395
Y I I+ ++D+ +CG V +A +L + K V W A++ +
Sbjct: 433 D-----YIISNSIQLTDNLSAGLIDMYAKCGSVADAIQLFSHVKHKLSSVSPWNAIICSL 487
Query: 396 KNHGNIEVAERVVKEI--IALEPNN 418
HG+ + + E+ ++PN+
Sbjct: 488 AIHGHAHTSLELFLELQRTNIKPNS 512
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 225/401 (56%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H + D F LL A SG++ A RLF + + W+ +I A
Sbjct: 257 KSVHGCALKGCYDHDLFVGIALLELYA--KSGEIIDAQRLFEEMPKTDLIPWSLMIARYA 314
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S +A+ L++ MR+T PN TF VL+AC++ SL+ KQIH+ V K GL+ ++
Sbjct: 315 QSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVF 374
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N ++ Y+ ++ N+ ++F+E+ +R W T+I GY Q A+ LF ML
Sbjct: 375 VSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHD 434
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P VT +SVL A A LE G ++H + ++ +L+ MY K G + A+
Sbjct: 435 MQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDAR 494
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
FD M +R+ +WNAMI G + HG + EAL+LF ++ PN +TFVGVLSAC +AG
Sbjct: 495 LTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAG 554
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ G+ F SM + Y I+P IEHY CMV LLGR G+ EA +LI + ++P V++W AL
Sbjct: 555 LLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRAL 614
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L AC H +++ + ++ +EP++ +V+LSNMYA A
Sbjct: 615 LGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATA 655
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 183/355 (51%), Gaps = 6/355 (1%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D F + L+ A S G++ A +F+ I + W ++ A + ++++ L+
Sbjct: 170 DAFVGTALID--AYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQ 227
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
MR G+ PN T + LK+C + + N K +H K D DL V L+ Y+ S +
Sbjct: 228 MRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGE 287
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ +A+++F+E+ L W+ MI+ YAQS R+ EAL LF +M PN+ T ASVL A
Sbjct: 288 IIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQA 347
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CA S L+LG+++H V G + A++ +Y K G + + LF+ +P+RN TW
Sbjct: 348 CASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTW 407
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMK 344
N +I G G E A++LF + + + P ++T+ VL A ++ G QI ++K
Sbjct: 408 NTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIK 467
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+Y + + ++D+ +CG++ +A +M K D V W A++ HG
Sbjct: 468 TMYNKDTVVA--NSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHG 519
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 194/373 (52%), Gaps = 4/373 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H ++ D FA + LL F S+S L A++LF+ + N + TL + +
Sbjct: 55 KHLHCHILKRGTSLDLFAQNILLNFYVQSNS--LQDASKLFDEMPQTNTISFVTLAQGYS 112
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+A+ + + + G N FT +LK ++ + C +H V K G D
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V L+ YSV +++ AR VFD+I + + WT M++ YA++ E+L LF+QM + G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
++PN+ T++ L +C +G+ VH ++ +G AL+ +Y K+G + A+
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LF+ MP+ ++ W+ MI+ A ++EALDLF ++ + +VPN+ TF VL AC +
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+G+QI + + +G+ + ++D+ +CG++ + +L + + + DV W +
Sbjct: 353 SLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVT-WNTI 410
Query: 392 LAACKNHGNIEVA 404
+ G+ E A
Sbjct: 411 IVGYVQLGDGERA 423
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%)
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G+ +H + RG + L++ Y ++ +L A LFD MP+ N ++ + G +
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
+AL ++ KE N F +L
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLL 143
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 243/416 (58%), Gaps = 3/416 (0%)
Query: 21 LADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSS-SGDLSYATRLFNSIQSP 78
L +C ++ + KQ+HA+ I +S F+AS +LA CA S ++YA +F I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
F +NT+IR + ++ ++A+ Y M + G P+ T+ +LKAC+ ++S+ KQIH
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V K GL+ D+ V N L+ Y ++ + VF+++ ++T W++M+S A +
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 199 EALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
E L+LF M E + + S L ACA +G L LG +H F+ E+ I+ T+L
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G L KA +F M +RN T++AMISGLA HG E AL +F K+ KE + P+
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+ +V VL+AC H+G + GR++F M + +EP EHYGC+VDLLGR G + EA E I+
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ + + V+W L+ C+ NIE+ + +E++ L +N G Y+++SN+Y++ +
Sbjct: 396 SIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 13/282 (4%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L + KS+ + KQIH Q+ D F + L+ G++ ++ +F +
Sbjct: 136 PCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINM--YGRCGEMELSSAVFEKL 193
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+S W++++ A+A + + L+ M T + L AC+N +LN
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
IH + ++ +L++ V LV Y L+ A +F ++ R ++ MISG A
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
AL +F +M+ EG EP+ V SVL+AC+ SG ++ G + VF +M + G +
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRR--VFAEM--LKEGKVEP 369
Query: 255 TA-----LVHMYTKNGALAKAKALFDSMP-ERNIATWNAMIS 290
TA LV + + G L +A S+P E+N W +S
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 222/373 (59%), Gaps = 6/373 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A LF+ + N W T+I A ++S KA+ + M R G PN +T++ VL
Sbjct: 65 GLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVL 124
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+AC + +L +Q+H + K GL+ D+ V + L+ YS + ++A VF+E+ L
Sbjct: 125 RACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLV 181
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
VW ++I G+AQ+ +E L L+ +M F + TL SVL AC LELG +VHV V
Sbjct: 182 VWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHV 241
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM-PERNIATWNAMISGLASHGHAEEA 301
++ IL AL+ MY K G+L A LF M E+++ +W+ MI+GLA +G + +A
Sbjct: 242 --LKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADA 299
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L LF ++ + PN IT +GVL AC HAG ++ G F SMK +GI+P EHYGC++D
Sbjct: 300 LKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIID 359
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LLGR GK+ EA +LI M +PD V W LL AC+ H N+++A KEI+ L+P + G
Sbjct: 360 LLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGT 419
Query: 422 YVVLSNMYAEAES 434
Y++LSN+YA ++
Sbjct: 420 YILLSNIYANSQK 432
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 149/294 (50%), Gaps = 6/294 (2%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M R + + T++ ++K C ++ + +H HV +G + ++N L+ Y
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L+ AR +FDE+ +R + WTTMIS Y+ S ++AL ML EG PN T +SVL A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
C G L L ++H + G E + +AL+ Y+K G A +F+ M ++ W
Sbjct: 127 C--DGLLNL-RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
N++I G A + +E L L++++++ V + T VL AC +++GRQ+
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH---VH 240
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
V + + ++D+ +CG + +A L RM+ + DV+ W ++A +G
Sbjct: 241 VLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNG 294
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 11/283 (3%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + L+Q+H ++ D F S L+ S G+ A +FN + + + +WN
Sbjct: 127 CDGLLNLRQLHGSILKVGLESDVFVRSALID--TYSKLGEQHDALNVFNEMITGDLVVWN 184
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
++I A + + D+ + LY M+R F +Q T T VL+AC+ + L +Q+H HV K
Sbjct: 185 SIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK- 243
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDE-IRNRTLNVWTTMISGYAQSFRANEALML 203
D DL + N L+ Y L +A +F + + + W+TMI+G AQ+ + +AL L
Sbjct: 244 -YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKL 302
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAILGTALVHM 260
F+ M +G +PN +T+ VL AC+ +G + G + F M+ G + G ++ +
Sbjct: 303 FEAMKSKGPKPNYITILGVLFACSHAGLVNDG--WYYFQSMKEHFGIDPGREHYGCIIDL 360
Query: 261 YTKNGALAKAKALFDSM-PERNIATWNAMISGLASHGHAEEAL 302
+ G L +A L M E + TW ++ H + + A+
Sbjct: 361 LGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAI 403
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 226/409 (55%), Gaps = 10/409 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K IH+ ++ S D + A+ LL S D+ ++F++I N W LI
Sbjct: 124 KCIHSCIVKSGFEADAYTATGLLHM--YVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYV 181
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ P +A+ ++ +M PN+ T L AC++ R ++ + +H + K+G D +
Sbjct: 182 KNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMS 241
Query: 152 VVN-------CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
N ++ Y+ L AR +F+++ R + W +MI+ Y Q R EAL LF
Sbjct: 242 TSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLF 301
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
M G P+ T SVLS CA L LG+ VH ++ G L TAL+ MY K
Sbjct: 302 FDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKT 361
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPNDITFVGV 323
G L A+ +F S+ ++++ W +MI+GLA HGH EAL +F+ ++++ +VP+ IT++GV
Sbjct: 362 GELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGV 421
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC H G ++ ++ F M +YG+ P EHYGCMVDLL R G EAE L++ M +P
Sbjct: 422 LFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQP 481
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
++ +WGALL C+ H N+ VA +V + LEP GV+++LSN+YA+A
Sbjct: 482 NIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKA 530
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 219/390 (56%), Gaps = 10/390 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLLA KCKSM +LK++H ++ + I+ S+L+ FC S GD++YA + I +
Sbjct: 8 LSLLA-KCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIHN 66
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
P+ ++WN++IR +S NP ++ LY M G++P+ TF FVLKAC + +C K I
Sbjct: 67 PSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCI 126
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H+ + KSG + D + L+ Y +D+ + +VFD I + WT +I+GY ++ +
Sbjct: 127 HSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQP 186
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE-------MG 250
EAL +F+ M EPN +T+ + L ACA S ++ G VH ++ G++
Sbjct: 187 YEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSN 246
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
IL TA++ MY K G L A+ LF+ MP+RNI +WN+MI+ + +EALDLF +
Sbjct: 247 IILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWT 306
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
+ P+ TF+ VLS C H + +G+ + + + GI I ++D+ + G++
Sbjct: 307 SGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKT-GIATDISLATALLDMYAKTGELG 365
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGN 400
A+++ + K DVVMW +++ HG+
Sbjct: 366 NAQKIFSSLQ-KKDVVMWTSMINGLAMHGH 394
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 208/378 (55%), Gaps = 6/378 (1%)
Query: 53 LLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
L + C S G + LF+ I P+ +N +I + + A+ L+ + +G
Sbjct: 258 LYSKCGKSCKGRI-----LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQR 312
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
N T ++ L + I K G+ L V L Y +++ ARQ+
Sbjct: 313 VNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FDE ++L W MISGY Q+ + A+ LF +M M PN VT+ S+LSACAQ G L
Sbjct: 373 FDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGAL 431
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+G+ VH +K E + TALV MY K G++ +A+ LFD M ++N+ TWNAMI+G
Sbjct: 432 SIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGY 491
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
HGH +EAL LF ++ + I P +TF+ +L AC H+G + G +IF SM YG +P
Sbjct: 492 GLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPM 551
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
EHY CMVD+LGR G++ A E I+RM +P +WGALL AC H N E+A K +
Sbjct: 552 SEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLF 611
Query: 413 ALEPNNHGVYVVLSNMYA 430
L+P N G YV+LSN+Y+
Sbjct: 612 QLDPENVGYYVLLSNIYS 629
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 200/410 (48%), Gaps = 10/410 (2%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPN 79
L + ++ QL QI AQ+I+ D + ++L F L G +++ +LFN + P+
Sbjct: 20 LLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDL---GAVAHVRQLFNKVSKPD 76
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
F++N LIR + + P +IFLY ++R+ T P+ T+ F + A S + +H
Sbjct: 77 LFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLH 136
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
H G+ +L V + +V Y + AR+VFD + R +W TMISG++++
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
+++ +F ML G +S TLA+VL+A A+ LG + +G + T L+
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+Y+K G K + LFD + + ++ ++NAMISG + E A+ LFR+L N
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316
Query: 319 TFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
T VG++ + + R I S+K ++P + + + R +V A +L
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS--TALTTVYCRLNEVQFARQLFD 374
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-ALEPNNHGVYVVLS 426
K + W A+++ +G + A + +E++ L PN V +LS
Sbjct: 375 ESPEK-SLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILS 423
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 208/378 (55%), Gaps = 6/378 (1%)
Query: 53 LLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
L + C S G + LF+ I P+ +N +I + + A+ L+ + +G
Sbjct: 258 LYSKCGKSCKGRI-----LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQR 312
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
N T ++ L + I K G+ L V L Y +++ ARQ+
Sbjct: 313 VNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FDE ++L W MISGY Q+ + A+ LF +M M PN VT+ S+LSACAQ G L
Sbjct: 373 FDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGAL 431
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+G+ VH +K E + TALV MY K G++ +A+ LFD M ++N+ TWNAMI+G
Sbjct: 432 SIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGY 491
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
HGH +EAL LF ++ + I P +TF+ +L AC H+G + G +IF SM YG +P
Sbjct: 492 GLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPM 551
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
EHY CMVD+LGR G++ A E I+RM +P +WGALL AC H N E+A K +
Sbjct: 552 SEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLF 611
Query: 413 ALEPNNHGVYVVLSNMYA 430
L+P N G YV+LSN+Y+
Sbjct: 612 QLDPENVGYYVLLSNIYS 629
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 200/410 (48%), Gaps = 10/410 (2%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPN 79
L + ++ QL QI AQ+I+ D + ++L F L G +++ +LFN + P+
Sbjct: 20 LLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDL---GAVAHVRQLFNKVSKPD 76
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
F++N LIR + + P +IFLY ++R+ T P+ T+ F + A S + +H
Sbjct: 77 LFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLH 136
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
H G+ +L V + +V Y + AR+VFD + R +W TMISG++++
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
+++ +F ML G +S TLA+VL+A A+ LG + +G + T L+
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+Y+K G K + LFD + + ++ ++NAMISG + E A+ LFR+L N
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316
Query: 319 TFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
T VG++ + + R I S+K ++P + + + R +V A +L
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVS--TALTTVYCRLNEVQFARQLFD 374
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII-ALEPNNHGVYVVLS 426
K + W A+++ +G + A + +E++ L PN V +LS
Sbjct: 375 ESPEK-SLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILS 423
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 235/406 (57%), Gaps = 5/406 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ Q +Q+HA I ++ D F + L+ A S L A ++F+ + N +N
Sbjct: 345 EALEQGRQVHAYTIKANLESDEFVKNGLIDMYA--KSNLLIDAKKVFDVMAEQNVISYNA 402
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I +S +A+ L+ MR F P+ TF +L +++ +L KQIH + K G
Sbjct: 403 MIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFG 462
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ LDL + L+ YS S + +AR VF+E+ + + VW M GY Q EAL L+
Sbjct: 463 VSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYS 522
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAILGTALVHMYTKN 264
+ +PN T A++++A + L G++ H VKM G + + ALV MY K
Sbjct: 523 TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM-GLDFCPFVTNALVDMYAKC 581
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ +A+ +F+S R++ WN+MIS A HG AEEAL +FR++ KE I PN +TFV VL
Sbjct: 582 GSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVL 641
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
SAC HAG ++ G F SM +GI+P EHY C+V LLGR GK+ EA+E I++M +P
Sbjct: 642 SACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPA 700
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
++W +LL+AC+ GN+E+ + + I+ +P + G Y++LSN++A
Sbjct: 701 AIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFA 746
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 189/366 (51%), Gaps = 4/366 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+H ++ S QD + + L+ F S +G++ A +F+ + W T+I
Sbjct: 150 QLHGFVVRSGFDQDVYVGTSLIDF--YSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTK 207
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
++ L+ MR T P+++ + VL ACS + L KQIH +V + G ++D+ V
Sbjct: 208 CGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSV 267
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
VN L+ Y+ + + R++FD++ + + WTTMISGY Q+ EA+ LF +M G+
Sbjct: 268 VNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW 327
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ SVL++C LE G +VH + E + L+ MY K+ L AK
Sbjct: 328 KPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKK 387
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FD M E+N+ ++NAMI G +S EAL+LF ++ P+ +TFV +L
Sbjct: 388 VFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFA 447
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+++ +QI G + + +G+ + ++D+ +C V +A + + M K D+V+W A+
Sbjct: 448 LELSKQIHGLIIK-FGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMF 505
Query: 393 AACKNH 398
H
Sbjct: 506 FGYTQH 511
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 205/399 (51%), Gaps = 10/399 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIHA ++ D + L+ F + + +LF+ + N W T+I
Sbjct: 250 KQIHAYVLRRGTEMDVSVVNVLIDF--YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYM 307
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A+ L+ M R G+ P+ T VL +C + +L +Q+H + K+ L+ D
Sbjct: 308 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF 367
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y+ S+ L +A++VFD + + + + MI GY+ + +EAL LF +M +
Sbjct: 368 VKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 427
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F P+ +T S+L A LEL +++H + G + G+AL+ +Y+K + A+
Sbjct: 428 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDAR 487
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ M E++I WNAM G H EEAL L+ L+ + PN+ TF +++A +
Sbjct: 488 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 547
Query: 332 FIDVGRQIFGSMKRVYGIE--PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ G+Q + ++ G++ P + + +VD+ +CG + EA ++ +W+ DVV W
Sbjct: 548 SLRHGQQFHNQLVKM-GLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWR-DVVCWN 603
Query: 390 ALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
++++ HG E A + +E++ ++PN VLS
Sbjct: 604 SMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLS 642
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 232/465 (49%), Gaps = 31/465 (6%)
Query: 11 PPLPIPPLSLLADKCKSMHQL----------KQIHAQMIISSRIQDHFAASRLLAFCALS 60
P L IP L + ++ QL K IH Q+I+S D F A+ L+ C S
Sbjct: 16 PCLQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVC--S 73
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFT 119
S + A +F+ + N W++++ + ++A+ +++++ R++G PN+
Sbjct: 74 KSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLA 133
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V++AC+ + + Q+H V +SG D D++V L+ YS + ++ AR VFD++ +
Sbjct: 134 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 193
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
T WTT+I+GY + R+ +L LF QM P+ ++SVLSAC+ LE G+++H
Sbjct: 194 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 253
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+V RG EM + L+ YTK + + LFD M +NI +W MISG +
Sbjct: 254 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 313
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH---- 355
EA+ LF ++ + P+ VL++C ++ GRQ+ Y I+ +E
Sbjct: 314 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQV-----HAYTIKANLESDEFV 368
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI-IAL 414
++D+ + +++A+++ M + +V+ + A++ + + A + E+ + L
Sbjct: 369 KNGLIDMYAKSNLLIDAKKVFDVMA-EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 427
Query: 415 EPNNHGVYVVLSNMYAEAESMKMQLEI--LLVQV-----LFAGLA 452
P + +V L + A ++++ +I L+++ LFAG A
Sbjct: 428 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSA 472
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 226/402 (56%), Gaps = 2/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H +S +++ F L+ SGD+ A ++F + + W+ +I A
Sbjct: 266 KAVHGCAFKTSYLEELFVGVELIDL--YIKSGDVDDALQVFEEMPKDDVIPWSFMIARYA 323
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S ++AI ++ MRR PNQ T +L+AC+++ L QIH HV K GLD+++
Sbjct: 324 QSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVF 383
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y+ + N+ Q+F E N T W T+I GY Q+ +AL+LF ML
Sbjct: 384 VSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQ 443
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+ VT +SVL ACA LE G ++H ++ ++G AL+ MY K G + A+
Sbjct: 444 VQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDAR 503
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD + E + +WNAMISG + HG EAL F + + + P+ +TFVG+LSAC +AG
Sbjct: 504 LVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAG 563
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G+ F SM Y IEP EHY CMV LLGR G + +A +L+ + ++P V++W AL
Sbjct: 564 LLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRAL 623
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
L+AC H ++E+ + ++ +EP + +V+LSN+YA A
Sbjct: 624 LSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANAR 665
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 181/355 (50%), Gaps = 6/355 (1%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D F + L+ S G A ++F++I+ + W ++ + ++++ L+
Sbjct: 179 DAFVGTALID--CYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSR 236
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
MR GF PN TF VLKAC + N K +H K+ +L V L+ Y S D
Sbjct: 237 MRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGD 296
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+++A QVF+E+ + W+ MI+ YAQS ++ EA+ +F +M PN TLAS+L A
Sbjct: 297 VDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQA 356
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CA L+LG ++H V G +M + AL+ MY K G + + LF P +W
Sbjct: 357 CASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSW 416
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMK 344
N +I G G+ E+AL LF+ + + Q+ ++T+ VL AC ++ G QI S+K
Sbjct: 417 NTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVK 476
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+Y + + ++D+ +CG + +A L+ M+ + D V W A+++ HG
Sbjct: 477 TIYDKNTVVGN--ALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVHG 528
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 191/397 (48%), Gaps = 6/397 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H ++I D FA + LL F S L A +LF+ + N + TLI+ +
Sbjct: 64 KYLHCEIIKKGNCLDLFANNILLNFYVKYDS--LPDAAKLFDEMPDRNTVSFVTLIQGYS 121
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
L +AI L+ ++ G N F+ VLK + +H V K G D D
Sbjct: 122 QCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAF 181
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V L+ CYSV ARQVFD I + + WT M++ Y ++ E+L LF +M + G
Sbjct: 182 VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVG 241
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+PN+ T ASVL AC +G+ VH + +G L+ +Y K+G + A
Sbjct: 242 FKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDAL 301
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ MP+ ++ W+ MI+ A +EEA+++F ++ + ++PN T +L AC
Sbjct: 302 QVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLV 361
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ +G QI + +V G++ + ++D+ +CG++ + +L D V W +
Sbjct: 362 DLQLGNQIHCHVVKV-GLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTD-VSWNTV 419
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ GN E A + K++ LE G V S++
Sbjct: 420 IVGYVQAGNGEKALILFKDM--LECQVQGTEVTYSSV 454
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 167/335 (49%), Gaps = 28/335 (8%)
Query: 70 RLFNS--IQSPNHFMWNT--LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF--VLK 123
RL S +Q PNH NT I Q S ++ R + +P +T+ + +L+
Sbjct: 3 RLLRSKLLQHPNHCKSNTALCIITQRS----------FLAQRTSHSSPEFNTYIYGSLLQ 52
Query: 124 ACSNVRSLNCC--KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
+C +R+ +C K +H + K G LDL N L+ Y L +A ++FDE+ +R
Sbjct: 53 SC--IRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNT 110
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
+ T+I GY+Q R +EA+ LF ++ EG E N ++VL + +LG VH
Sbjct: 111 VSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHAC 170
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
V GF+ A +GTAL+ Y+ G A+ +FD++ +++ +W M++ + EE+
Sbjct: 171 VYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEES 230
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP---KIEHYGC 358
L LF ++ PN+ TF VL AC +VG+ + G + +E +E
Sbjct: 231 LKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVE---- 286
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
++DL + G V +A ++ + M K DV+ W ++A
Sbjct: 287 LIDLYIKSGDVDDALQVFEEMP-KDDVIPWSFMIA 320
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 224/435 (51%), Gaps = 74/435 (17%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+HA M++ S+++AF A SSGD+ + +FN I
Sbjct: 91 QVHAHMLLRGLQPTALVGSKMVAFYA--SSGDIDSSVSVFNGIG---------------- 132
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+ TF FVLK+ + S+ K +H + + GL DL+V
Sbjct: 133 ---------------------DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYV 171
Query: 153 VNCLVRCYSVSSDLNNARQVFDE--IRN-----------------------------RTL 181
L+ Y ++N+A +VFD IR+ R +
Sbjct: 172 ATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI 231
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLME--GFEPNSVTLASVLSACAQSGCLELGEKVH 239
WTTMISGY+QS A +AL LFD+M+ E G PN VT+ SVL ACAQ LE G ++H
Sbjct: 232 VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIH 291
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP--ERNIATWNAMISGLASHGH 297
G A + AL MY K G+L A+ FD + E+N+ WN MI+ AS+GH
Sbjct: 292 ELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH 351
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+A+ FR++ + I P+DITF G+LS C H+G +DVG + F M Y I P++EHY
Sbjct: 352 GLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYA 411
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
C+ DLLGR G++ EA +L+ M +WG+LLAAC+ H N+E+AE +++ LEP
Sbjct: 412 CVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPE 471
Query: 418 NHGVYVVLSNMYAEA 432
N G YV+LSNMYAEA
Sbjct: 472 NTGNYVLLSNMYAEA 486
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 214/370 (57%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A +F + S N WNT+I A + ++A ++ M G P + L
Sbjct: 292 GSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGAL 351
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+N+ L + +H + + + D+ V+N L+ YS ++ A VF ++++T+
Sbjct: 352 HACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVV 411
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W MI GYAQ+ NEAL LF +M +P+S TL SV++A A + +H
Sbjct: 412 TWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLA 471
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ + TAL+ + K GA+ A+ LFD M ER++ TWNAMI G ++GH EAL
Sbjct: 472 IRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREAL 531
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
DLF +++ + PN+ITF+ V++AC H+G ++ G F SMK YG+EP ++HYG MVDL
Sbjct: 532 DLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDL 591
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G++ +A + I+ M KP + + GA+L AC+ H N+E+ E+ E+ L+P++ G +
Sbjct: 592 LGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYH 651
Query: 423 VVLSNMYAEA 432
V+L+NMYA A
Sbjct: 652 VLLANMYASA 661
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 198/390 (50%), Gaps = 8/390 (2%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSI 75
P ++L + C S+ +L QI +I + +H ++L++ FC +S ++ A R+F +
Sbjct: 46 PSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNS---ITEAARVFEPV 102
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
+ +++T+++ A + A+ Y MR P + FT++L+ L +
Sbjct: 103 EHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGR 162
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+IH V +G +L + +V Y+ + +A ++F+ + R L W T+++GYAQ+
Sbjct: 163 EIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNG 222
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
A A+ + QM G +P+S+TL SVL A A L +G +H + GFE + T
Sbjct: 223 FARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVAT 282
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
A++ Y K G++ A+ +F M RN+ +WN MI G A +G +EEA F K+ E + P
Sbjct: 283 AMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEP 342
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
+++ +G L AC + G ++ GR + + ++ G + + ++ + +C +V A
Sbjct: 343 TNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSV--MNSLISMYSKCKRVDIAAS 400
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + K VV W A++ +G + A
Sbjct: 401 VFGNLKHKT-VVTWNAMILGYAQNGCVNEA 429
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 201/417 (48%), Gaps = 6/417 (1%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
++C + L L+ + + + ++IH +I + + FA + ++ A
Sbjct: 133 MRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQ 192
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
+ +Y ++F + + WNT++ A + +A+ + + M+ G P+ T VL
Sbjct: 193 IEDAY--KMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVL 250
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
A +++++L + IH + ++G + ++V ++ Y + +AR VF + +R +
Sbjct: 251 PAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVV 310
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W TMI GYAQ+ + EA F +ML EG EP +V++ L ACA G LE G VH +
Sbjct: 311 SWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLL 370
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ + +L+ MY+K + A ++F ++ + + TWNAMI G A +G EAL
Sbjct: 371 DEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEAL 430
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+LF +++ I P+ T V V++A + I G R ++ + ++D
Sbjct: 431 NLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTL-MDKNVFVCTALIDT 489
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
+CG + A +L M + V+ W A++ +G+ A + E+ +++PN
Sbjct: 490 HAKCGAIQTARKLFDLM-QERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPN 545
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/410 (37%), Positives = 225/410 (54%), Gaps = 10/410 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
K + +++Q H+ + + D + + L+ S GD A ++F + + W
Sbjct: 121 KFSGIGEVRQFHSVSVKTGLWCDIYVQNTLVH--VYSICGDNVGAGKVFEDMLVRDVVSW 178
Query: 84 NTLIRAQASS--LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
LI + N ++FL MN+ PN TF +L AC + LN K IH V
Sbjct: 179 TGLISGYVKTGLFNEAISLFLRMNVE-----PNVGTFVSILGACGKLGRLNLGKGIHGLV 233
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K +L V N ++ Y + +AR++FDE+ + + WT+MI G Q E+L
Sbjct: 234 FKCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESL 293
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
LF QM GFEP+ V L SVLSACA G L+ G VH ++ + +GT LV MY
Sbjct: 294 DLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMY 353
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + A+ +F+ MP +NI TWNA I GLA +G+ +EAL F L + PN++TF+
Sbjct: 354 AKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFL 413
Query: 322 GVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V +ACCH G +D GR+ F M +Y + P +EHYGCMVDLL R G V EA ELIK M
Sbjct: 414 AVFTACCHNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMP 473
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
PDV + GALL++ +GN+ + ++K + +E + G+YV+LSN+YA
Sbjct: 474 MPPDVQILGALLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYA 523
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 203/402 (50%), Gaps = 13/402 (3%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ-SPN 79
L KC + KQIHA ++ S+ + + ++ F + D+ Y S +
Sbjct: 15 LIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHIT-DVHYPCNFLKQFDWSLS 73
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F N LI AS P AI +Y R GF P+ +TF VLK+C+ + +Q H+
Sbjct: 74 SFPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHS 133
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
K+GL D++V N LV YS+ D A +VF+++ R + WT +ISGY ++ NE
Sbjct: 134 VSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNE 193
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH--VFVKMRGFEMGAILGTAL 257
A+ LF +M EPN T S+L AC + G L LG+ +H VF + G E+ ++ A+
Sbjct: 194 AISLFLRM---NVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEEL--VVCNAV 248
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ MY K ++ A+ +FD MPE++I +W +MI GL E+LDLF +++ P+
Sbjct: 249 LDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDG 308
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+ VLSAC G +D GR + + + I+ + +VD+ +CG + A+ +
Sbjct: 309 VILTSVLSACASLGLLDCGRWVHEYID-CHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFN 367
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
M K ++ W A + +G + A + ++++ PN
Sbjct: 368 GMPSK-NIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPN 408
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 239/432 (55%), Gaps = 33/432 (7%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
++ HA I + D + S L+ + G + A ++F+ + S +WN ++R
Sbjct: 69 RKAHAAAIKTGFRWDAYTGSSLMEM--YTMLGRVDIARKVFDEMPSRALVLWNMMVRCYI 126
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS-GLDL-- 148
A+ L M R+G P++ T + ACS R L+ ++IH ++ G +L
Sbjct: 127 RCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPV 186
Query: 149 -----DLHVVN----------------------CLVRCYSVSSDLNNARQVFDEIRNRTL 181
D++ N LV Y ++ L+ AR +F++ + + L
Sbjct: 187 ANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDL 246
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
+WT MI+ Q EAL LF M M+ EP+ T+ ++L+ CA G L+ GE +H +
Sbjct: 247 ILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQY 306
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ R ++ A+LGTAL+ MY+K G + K+ +F M R+ W A+I GLA++G A A
Sbjct: 307 AEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRA 366
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L+LF+ +++ ++ P+ +TF+GVLSACCH G +D GR+ F +M+ VY IEP++EHY C+V+
Sbjct: 367 LELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVN 426
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVV-MWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
LLGR G + EAE LI + D + ++GALL ACK HGN+E++ER+ K I +
Sbjct: 427 LLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITD 486
Query: 421 VYVVLSNMYAEA 432
V +++SN+YA A
Sbjct: 487 VNLLMSNVYATA 498
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 174/350 (49%), Gaps = 38/350 (10%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N LIR A + + + +Y ++R G + T+ FVL+A ++ ++ H K
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIK 77
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+G D + + L+ Y++ ++ AR+VFDE+ +R L +W M+ Y + R + A+ L
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVAL 137
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGTALVHMYT 262
+QM G P+ VTL + ++AC+++ L LG ++HV++ + GF + + AL+ MYT
Sbjct: 138 SEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLP--VANALLDMYT 195
Query: 263 KNGALAKAKALFDSMPERNIAT-------------------------------WNAMISG 291
KN L +A LF+ MP RNI + W AMI+
Sbjct: 196 KNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINA 255
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIE 350
HG EEAL LFR ++ +++ P+ T V +L+ C + G +D G I + +R I+
Sbjct: 256 CVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKID 315
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ ++D+ +CG + ++ E+ RM + D W A++ +G
Sbjct: 316 AVLGT--ALIDMYSKCGHIEKSLEVFWRMQGR-DATAWTAIICGLATNGQ 362
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 235/406 (57%), Gaps = 5/406 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ Q +Q+HA I ++ + F + L+ A S L A ++F+ + N +N
Sbjct: 253 EALEQGRQVHAYTIKANLESNEFVKNGLIDMYA--KSNLLXDAKKVFDVMAEQNVISYNA 310
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I +S +A+ L+ MR F P+ TF +L +++ +L KQIH + K G
Sbjct: 311 MIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXG 370
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ LDL + L+ YS S + +AR VF+E+ + + VW M GY Q EAL L+
Sbjct: 371 VSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYS 430
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAILGTALVHMYTKN 264
+ +PN T A++++A + L G++ H VKM G + + ALV MY K
Sbjct: 431 TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM-GLDFCPFVTNALVDMYAKC 489
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ +A+ +F+S R++ WN+MIS A HG AEEAL +FR++ KE I PN +TFV VL
Sbjct: 490 GSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVL 549
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
SAC HAG ++ G F SM +GI+P EHY C+V LLGR GK+ EA+E I++M +P
Sbjct: 550 SACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPA 608
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
++W +LL+AC+ GN+E+ + + I+ +P + G Y++LSN++A
Sbjct: 609 AIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFA 654
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 188/366 (51%), Gaps = 4/366 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+H ++ S QD + + L+ F S +GB+ A +F+ + W T+I
Sbjct: 58 QLHGFVVRSGFDQDVYVGTSLIDF--YSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTK 115
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
++ L+ MR T P+++ + VL ACS + L KQIH +V + G ++D+ V
Sbjct: 116 CGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSV 175
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
VN L+ Y+ + + R++FD++ + + WTTMISGY Q+ EA+ LF +M G+
Sbjct: 176 VNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW 235
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ SVL++C LE G +VH + E + L+ MY K+ L AK
Sbjct: 236 KPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKK 295
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FD M E+N+ ++NAMI G +S EAL+LF ++ P+ +TFV +L
Sbjct: 296 VFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFA 355
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+++ +QI G + + G+ + ++D+ +C V +A + + M K D+V+W A+
Sbjct: 356 LELSKQIHGLIIKX-GVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMF 413
Query: 393 AACKNH 398
H
Sbjct: 414 FGYTQH 419
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 206/399 (51%), Gaps = 10/399 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIHA ++ D + L+ F + + +LF+ + N W T+I
Sbjct: 158 KQIHAYVLRRGTEMDVSVVNVLIDF--YTKCNRVKAGRKLFDQMVVKNIISWTTMISGYM 215
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A+ L+ M R G+ P+ T VL +C ++ +L +Q+H + K+ L+ +
Sbjct: 216 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEF 275
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y+ S+ L +A++VFD + + + + MI GY+ + +EAL LF +M +
Sbjct: 276 VKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 335
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F P+ +T S+L A LEL +++H + G + G+AL+ +Y+K + A+
Sbjct: 336 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDAR 395
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ M E++I WNAM G H EEAL L+ L+ + PN+ TF +++A +
Sbjct: 396 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 455
Query: 332 FIDVGRQIFGSMKRVYGIE--PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ G+Q + ++ G++ P + + +VD+ +CG + EA ++ +W+ DVV W
Sbjct: 456 SLRHGQQFHNQLVKM-GLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWR-DVVCWN 511
Query: 390 ALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
++++ HG E A + +E++ ++PN VLS
Sbjct: 512 SMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLS 550
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 191/369 (51%), Gaps = 19/369 (5%)
Query: 97 DKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC 155
++A+ +++++ R++G PN+ V++AC+ + + Q+H V +SG D D++V
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77
Query: 156 LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
L+ YS + B+ AR VFD++ +T WTT+I+GY + R+ +L LF QM P+
Sbjct: 78 LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
++SVLSAC+ LE G+++H +V RG EM + L+ YTK + + LFD
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
M +NI +W MISG + EA+ LF ++ + P+ VL++C ++
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257
Query: 336 GRQIFGSMKRVYGIEPKIEH----YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
GRQ+ Y I+ +E ++D+ + + +A+++ M + +V+ + A+
Sbjct: 258 GRQV-----HAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMA-EQNVISYNAM 311
Query: 392 LAACKNHGNIEVAERVVKEI-IALEPNNHGVYVVLSNMYAEAESMKMQLEI--LLVQV-- 446
+ + + A + E+ + L P + +V L + A ++++ +I L+++
Sbjct: 312 IEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGV 371
Query: 447 ---LFAGLA 452
LFAG A
Sbjct: 372 SLDLFAGSA 380
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
Query: 197 ANEALMLF-DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
+ EALM+F D G PN LASV+ AC Q G +E G ++H FV GF+ +GT
Sbjct: 17 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 76
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
+L+ Y+KNG + A+ +FD + E+ TW +I+G G + +L+LF ++ + +VP
Sbjct: 77 SLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVP 136
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
+ VLSAC F++ G+QI + R G E + ++D +C +V +L
Sbjct: 137 DRYVVSSVLSACSMLEFLEGGKQIHAYVLR-RGTEMDVSVVNVLIDFYTKCNRVKAGRKL 195
Query: 376 IKRMVWKPDVVMWGALLAA 394
+MV K +++ W +++
Sbjct: 196 FDQMVVK-NIISWTTMISG 213
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 230/401 (57%), Gaps = 2/401 (0%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
Q +QIHA +I + D + + L+ A L+ A +F+++ + +N +I
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYA--KCEHLTEARAVFDALAEDDAISYNAMIEG 397
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ + + +A+ ++ MR P+ TF +L S+ ++ KQIH + KSG LD
Sbjct: 398 YSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLD 457
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
L+ + L+ YS S +N+A+ VF+ + + + +W +MI G+AQ+ + EA+ LF+Q+L+
Sbjct: 458 LYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLL 517
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
G PN T ++++ + + G++ H ++ G + + AL+ MY K G + +
Sbjct: 518 SGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKE 577
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
+ LF+S ++ WN+MI+ A HGHAEEAL +FR + + ++ PN +TFVGVLSAC H
Sbjct: 578 GRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAH 637
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
AGF+ G F SMK Y IEP IEHY +V+L GR GK+ A+E I+RM KP +W
Sbjct: 638 AGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWR 697
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+LL+AC GN E+ + + +P + G YV+LSN+YA
Sbjct: 698 SLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYA 738
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 192/389 (49%), Gaps = 8/389 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+QIH S+ D + L+ +C S LS A +LF+ ++ N W T+I
Sbjct: 241 RQIHGYAYRSATETDTSVINVLIDLYCKCSR---LSAARKLFDCMEYRNLVSWTTMISGY 297
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ +AI ++ NM + G+ P+ T +L +C ++ ++ +QIH HV K+ L+ D
Sbjct: 298 MQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADE 357
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
+V N L+ Y+ L AR VFD + + MI GY+++ EA+ +F +M
Sbjct: 358 YVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFF 417
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
P+ +T S+L + +EL +++H + G + +AL+ +Y+K + A
Sbjct: 418 SLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDA 477
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
K +F+ + +++ WN+MI G A + EEA+ LF +L + PN+ TFV +++
Sbjct: 478 KTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTL 537
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ G+Q + + G++ ++D+ +CG + E L + + DV+ W +
Sbjct: 538 ASMFHGQQFHAWIIKA-GVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE-DVICWNS 595
Query: 391 LLAACKNHGNIEVAERVVKEI--IALEPN 417
++ HG+ E A +V + + +EPN
Sbjct: 596 MITTYAQHGHAEEALQVFRLMGEAEVEPN 624
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 180/375 (48%), Gaps = 7/375 (1%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
IHA+ ++ R+ D F + LL S+ G L A LF+ + N W ++I
Sbjct: 40 IHARATVAGRLDDLFLTNLLLR--GYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQH 97
Query: 94 LNPDKAIFLYMNMRRTGF-APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
D AI L++ ++ PN+ VL+AC+ ++++ +Q+H K LD +++V
Sbjct: 98 GRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYV 157
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
L+ Y+ ++ A VF + RT W T+I+GYAQ AL LFD+M +EG
Sbjct: 158 GTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGV 217
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
P+ LAS +SAC+ G LE G ++H + E + L+ +Y K L+ A+
Sbjct: 218 RPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARK 277
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
LFD M RN+ +W MISG + EA+ +F + + P+ +L++C
Sbjct: 278 LFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAA 337
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
I GRQI + + +E ++D+ +C + EA + + + D + + A++
Sbjct: 338 IWQGRQIHAHVIKA-DLEADEYVKNALIDMYAKCEHLTEARAVFDALA-EDDAISYNAMI 395
Query: 393 AACKNHGNIEVAERV 407
N ++AE V
Sbjct: 396 EGYSK--NRDLAEAV 408
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 5/347 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A +F+++ WNT+I A A+ L+ M G P++ +
Sbjct: 169 GCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAV 228
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
ACS + L +QIH + +S + D V+N L+ Y S L+ AR++FD + R L
Sbjct: 229 SACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLV 288
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WTTMISGY Q+ EA+ +F M G++P+ S+L++C + G ++H V
Sbjct: 289 SWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHV 348
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
E + AL+ MY K L +A+A+FD++ E + ++NAMI G + + EA+
Sbjct: 349 IKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAV 408
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
++F+++ + P+ +TFV +L I++ +QI G + + G + ++D+
Sbjct: 409 NIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKS-GTSLDLYAASALIDV 467
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+C V +A+ + + +K D+V+W +++ H E E +K
Sbjct: 468 YSKCSLVNDAKTVFNMLHYK-DMVIWNSMIFG---HAQNEQGEEAIK 510
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 218 TLASVLSACAQSG---CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
+LA VL +C +G L +H + G L L+ Y+ G L A+ LF
Sbjct: 17 SLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLF 76
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI-VPNDITFVGVLSACCHAGFI 333
D MP RN+ +W ++IS HG + A+ LF +K VPN+ VL AC + +
Sbjct: 77 DRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAV 136
Query: 334 DVGRQIFG 341
+G Q+ G
Sbjct: 137 SLGEQVHG 144
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 232/402 (57%), Gaps = 3/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H +++ D FA + LL S L A++LF+ + N + TLI+ A
Sbjct: 58 KGLHCEILKRGGCLDLFAWNILLNM--YVKSDFLCDASKLFDEMPERNTISFVTLIQGYA 115
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S+ +AI L++ + R PNQ TF VL+AC+ + LN QIH HV K GL D+
Sbjct: 116 ESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVF 174
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y+ + N+ ++F E +R W T+I G+ Q +AL LF ML
Sbjct: 175 VSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYR 234
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+ VT +S L ACA LE G ++H F+ ++ AL+ MY K G++ A+
Sbjct: 235 VQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDAR 294
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD M +++ +WNAMISG + HG EAL +F K+++ ++ P+ +TFVGVLSAC +AG
Sbjct: 295 LVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAG 354
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G+ F SM + +GIEP IEHY CMV LLGR G + +A +LI + ++P V++W AL
Sbjct: 355 LLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRAL 414
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
L AC H +IE+ + ++ +EP + +V+LSNMYA A+
Sbjct: 415 LGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAK 456
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 145/302 (48%), Gaps = 3/302 (0%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
N H + L+ C + K +H + K G LDL N L+ Y S L +A ++F
Sbjct: 37 NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
DE+ R + T+I GYA+S R EA+ LF ++ E PN T ASVL ACA L
Sbjct: 97 DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVL-PNQFTFASVLQACATMEGLN 155
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG ++H V G + AL+ +Y K G + + LF P RN TWN +I G
Sbjct: 156 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHV 215
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
G E+AL LF + + ++ ++T+ L AC ++ G QI S+ + I
Sbjct: 216 QLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIH-SLTVKTTFDKDI 274
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
++D+ +CG + +A L+ ++ K D V W A+++ HG A R+ ++
Sbjct: 275 VVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQE 333
Query: 414 LE 415
E
Sbjct: 334 TE 335
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
E NS A+ L C Q G+ +H + RG + L++MY K+ L A
Sbjct: 35 EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
LFD MPERN ++ +I G A EA++LF +L +E ++PN TF VL AC
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEG 153
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+++G QI + ++ G+ + ++D+ +CG++ + EL + DV W ++
Sbjct: 154 LNLGNQIHCHVIKI-GLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVT-WNTVI 211
Query: 393 AACKNHGNIEVAERV 407
G+ E A R+
Sbjct: 212 VGHVQLGDGEKALRL 226
>gi|255556057|ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541726|gb|EEF43274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 386
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 210/338 (62%), Gaps = 5/338 (1%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAF-CALSSSGDLSYATRLFNS 74
P L + L+Q+HA +I+S ++LL CA +G + Y ++F S
Sbjct: 13 PAYHFLLQAGPRLKPLQQVHAYVIVSGSGHSRSLLTKLLNLACA---AGSIIYTRQIFLS 69
Query: 75 IQSPNHFMWNTLIRAQASSLNPD-KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+ +P+ F++NTLI++ + ++F Y M + +P+ +TFT ++K+C+++ SL
Sbjct: 70 VANPDSFLFNTLIKSTSKFHKFSIYSLFFYNCMLLSDISPSAYTFTSIVKSCADLSSLKL 129
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
K +H HV +G LD++V LV CY+ S DL NAR+VFD++R R++ W ++ISGY Q
Sbjct: 130 GKVVHGHVLVNGFGLDVYVQAALVACYAKSGDLGNARKVFDKMRERSVVSWNSIISGYEQ 189
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ EA+ LF +M EGFEP+S T VLSACAQ G L +G VH + G ++ +L
Sbjct: 190 NGFGREAIRLFKKMREEGFEPDSATFVIVLSACAQLGALSMGCWVHKYTIGHGLDLNVVL 249
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT+L++MYT+ G + KA+ +FDSM E+N+ TW AMISG ++GH +A+ LF ++++
Sbjct: 250 GTSLINMYTRCGTVTKAREVFDSMKEKNVVTWTAMISGYGTNGHGRQAVQLFDEMKRRGP 309
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
PN +TFV VLSAC HAG + G Q+F SM+ Y ++P
Sbjct: 310 CPNSVTFVAVLSACAHAGLVKEGWQVFVSMREEYHLKP 347
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 235/433 (54%), Gaps = 18/433 (4%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P I S L D C KQIH Q + D F AS L+ S G L+ A +L
Sbjct: 90 PCTIKSCSSLYDLCAG----KQIHQQAFVFGYGSDIFVASALIDM--YSKCGYLNDARKL 143
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFL-----------YMNMRRTGFAPNQHTFTF 120
F+ I N W ++I + +A+FL Y + G +
Sbjct: 144 FDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGC 203
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
V+ AC+ V + + +H K G + L V N L+ Y+ +++ +R+VFD +
Sbjct: 204 VISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETD 263
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W ++I+ YAQ+ + EA LF M+ G N+VTL++VL ACA SG L++G+ +H
Sbjct: 264 VCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIH 323
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V E ++GT++V MY K G + A+ FD + +N+ +W M++G HGH +
Sbjct: 324 DQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGK 383
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA+ +F ++ + I PN ITFV VL+AC HAG + G F MK + +EP IEHY CM
Sbjct: 384 EAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCM 443
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G + EA LI+ M KPD ++WG+LL AC+ H N+E+ E +++ L+P+N
Sbjct: 444 VDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNC 503
Query: 420 GVYVVLSNMYAEA 432
G YV+LSN+YA+A
Sbjct: 504 GYYVLLSNIYADA 516
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 190/351 (54%), Gaps = 16/351 (4%)
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+ WN++I A S + +A++ + +MR+ PN+ TF +K+CS++ L KQIH
Sbjct: 52 YSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQ 111
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
G D+ V + L+ YS LN+AR++FDEI R + WT+MISGY Q+ RA EA
Sbjct: 112 AFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREA 171
Query: 201 LMLF-----------DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
+ LF D+++ G +SV L V+SACA+ + E VH +GFE
Sbjct: 172 VFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEG 231
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+G L+ Y K G ++ ++ +FD M E ++ +WN++I+ A +G + EA LF +
Sbjct: 232 CLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMV 291
Query: 310 KE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
K ++ N +T VL AC H+G + +G+ I + ++ +E + +VD+ +CG+
Sbjct: 292 KRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM-ELEDNLVVGTSIVDMYCKCGR 350
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
V A + R+ + +V W ++A HG+ + A +V E+I ++PN
Sbjct: 351 VEMARKAFDRLK-RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPN 400
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 268 AKAKALFDSMPER-NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A +++F ++ ++ +WN++I+ A G + +AL F + K + PN TF + +
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C + G+QI V+G I ++D+ +CG + +A +L + + +VV
Sbjct: 96 CSSLYDLCAGKQIH-QQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP-ERNVV 153
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
W ++++ + A + KE + ++ ++
Sbjct: 154 SWTSMISGYVQNERAREAVFLFKEFLLVDETDY 186
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 227/398 (57%), Gaps = 43/398 (10%)
Query: 86 LIRAQA---SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
+I+A A +S + IFL M +R +GF PN++TF FV KAC N + +QI H
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSM-VRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAI 59
Query: 143 KSGLDLDLHVVNCLVRCYS-------------------------------VSSDLNNARQ 171
K GL+ +L V N ++R Y+ S ++ A++
Sbjct: 60 KIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKE 119
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
+FDE+ R + WTT+I+GY Q EAL LF +ML G PN TLAS L+ACA
Sbjct: 120 MFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVA 179
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF--DSMPERNIATWNAMI 289
L+ G +HV++ +M L +L+ MY K G + A +F + + + WNAMI
Sbjct: 180 LDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMI 239
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
G A HG ++EA+DLF +++ E++ PN +TFV +L+AC H ++ GR F SM YGI
Sbjct: 240 GGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGI 299
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
EP+IEHYGCMVDLLGR G + EAEE + M PD +WGALL AC+ H +IE +R+ K
Sbjct: 300 EPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGK 359
Query: 410 EIIALEPNNHGVYVVLSNMYA------EAESMKMQLEI 441
I L+ ++ G +V+L+N+Y+ EA++++ ++E+
Sbjct: 360 IIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEV 397
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 4/244 (1%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
SG++ A +F+ + + W T+I +A+ L+ M +TG PN+ T
Sbjct: 111 SGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASA 170
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC+N+ +L+ + IH ++ KS + ++ ++ L+ Y+ +++ A +VF + L
Sbjct: 171 LAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKL 230
Query: 182 NV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK-V 238
V W MI GYA ++ EA+ LF+QM +E PN VT ++L+AC+ +E G
Sbjct: 231 KVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYF 290
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT-WNAMISGLASHGH 297
G E +V + ++G L +A+ +MP AT W A++ H
Sbjct: 291 KSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKD 350
Query: 298 AEEA 301
E
Sbjct: 351 IERG 354
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 227/404 (56%), Gaps = 2/404 (0%)
Query: 29 HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
H QIHA + + + D F ++ L+ S SG + A LF + + WN ++
Sbjct: 1025 HLATQIHACAMKAGVVLDSFVSTTLID--VYSKSGKMEEAEFLFVNQDGFDLASWNAMMH 1082
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
S + KA+ LY+ M+ +G NQ T KA + L KQI V K G +L
Sbjct: 1083 GYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNL 1142
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
DL V++ ++ Y ++ +AR++F+EI + WTTMISG ++ + AL + M
Sbjct: 1143 DLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMR 1202
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+ +P+ T A+++ AC+ LE G ++H + T+LV MY K G +
Sbjct: 1203 LSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIE 1262
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A+ LF IA+WNAMI GLA HG+AEEAL F +++ + P+ +TF+GVLSAC
Sbjct: 1263 DARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACS 1322
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H+G + + F SM+++YGIEP+IEHY C+VD L R G++ EAE++I M ++ M+
Sbjct: 1323 HSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMY 1382
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LL AC+ + E +RV ++++ALEP++ YV+LSN+YA A
Sbjct: 1383 RTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAA 1426
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 169/352 (48%), Gaps = 5/352 (1%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
+G +S A +F + + WNT+I A S + ++ +++++ R G P+Q T V
Sbjct: 954 TGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASV 1013
Query: 122 LKACSNV-RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
L+ACS++ + QIH K+G+ LD V L+ YS S + A +F
Sbjct: 1014 LRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFD 1073
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
L W M+ GY S +AL L+ M G N +TLA+ A L+ G+++
Sbjct: 1074 LASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQA 1133
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
V RGF + + + ++ MY K G + A+ +F+ +P + W MISG +G E
Sbjct: 1134 VVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEH 1193
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCM 359
AL + + ++ P++ TF ++ AC ++ GRQI ++K +P + +
Sbjct: 1194 ALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSL 1251
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
VD+ +CG + +A L KR + W A++ HGN E A + +E+
Sbjct: 1252 VDMYAKCGNIEDARGLFKRTN-TSRIASWNAMIVGLAQHGNAEEALQFFEEM 1302
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 10/345 (2%)
Query: 66 SYATRLF---NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
+Y T+LF + + WN + +A+ +++M + A + TF +L
Sbjct: 854 AYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVML 913
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+ + L KQIH V +SGLD + V NCL+ Y + ++ AR VF ++ L
Sbjct: 914 SVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLV 973
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ--SGCLELGEKVHV 240
W TMISG A S ++ +F +L G P+ T+ASVL AC+ GC L ++H
Sbjct: 974 SWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGC-HLATQIHA 1032
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
G + + + T L+ +Y+K+G + +A+ LF + ++A+WNAM+ G G +
Sbjct: 1033 CAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPK 1092
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCM 359
AL L+ +++ N IT A + G+QI +KR + ++ + +
Sbjct: 1093 ALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV--ISGV 1150
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+D+ +CG+ +E+ I + PD V W +++ C +G E A
Sbjct: 1151 LDMYLKCGE-MESARRIFNEIPSPDDVAWTTMISGCVENGQEEHA 1194
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 167/370 (45%), Gaps = 39/370 (10%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI--QSPNHFMWNTLIRA 89
K+ HA+++ S D F + L+ S G LS A +LF++ S + WN ++ A
Sbjct: 646 KRAHARILTSGHHPDRFLTNNLITM--YSKCGSLSSARKLFDTTPDTSRDLVTWNAILSA 703
Query: 90 QASSLNPDKA---IFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
A DKA L+ +RR+ + +HT V K C S + + +H + K GL
Sbjct: 704 HA-----DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGL 758
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D+ V LV Y+ + AR +FD + R + +W M+ Y + EAL+LF +
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSE 818
Query: 207 MLMEGFEPNSVTLASVLSAC-AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
G P+ VTL ++ ++ LE K +++ + GT L MY +
Sbjct: 819 FNRTGLRPDDVTLCTLARVVKSKQNVLEWQLK-----QLKAY------GTKLF-MYDDDD 866
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ ++ WN +S G EA+D F + ++ + +TFV +LS
Sbjct: 867 DGS------------DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLS 914
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
+++G+QI G + R G++ + C++++ + G V A + +M + D+
Sbjct: 915 VVAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN-EVDL 972
Query: 386 VMWGALLAAC 395
V W +++ C
Sbjct: 973 VSWNTMISGC 982
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 179/427 (41%), Gaps = 41/427 (9%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S+ R P+ + LL+ S + +H + D F A L+ A G +
Sbjct: 724 SATRHTLAPVFKMCLLS---ASPSAAESLHGYAVKIGLQWDVFVAGALVNIYA--KFGRI 778
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ---HTFTFVL 122
A LF+ + + +WN +++A + +A+ L+ RTG P+ T V+
Sbjct: 779 REARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVV 838
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
K+ NV KQ+ + +K + SD+
Sbjct: 839 KSKQNVLEWQL-KQLKAYGTKL----------FMYDDDDDGSDVI--------------- 872
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +S + Q EA+ F M+ + +T +LS A CLELG+++H V
Sbjct: 873 AWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIV 932
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + +G L++MY K G++++A+ +F M E ++ +WN MISG A G E ++
Sbjct: 933 VRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSV 992
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCH-AGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMV 360
+F L + ++P+ T VL AC G + QI +MK ++ + ++
Sbjct: 993 GMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS--TTLI 1050
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
D+ + GK+ EAE L D+ W A++ G+ A R+ I+ E
Sbjct: 1051 DVYSKSGKMEEAEFLFVNQD-GFDLASWNAMMHGYIVSGDFPKALRLY--ILMQESGERA 1107
Query: 421 VYVVLSN 427
+ L+N
Sbjct: 1108 NQITLAN 1114
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE- 279
S+L + L LG++ H + G L L+ MY+K G+L+ A+ LFD+ P+
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 280 -RNIATWNAMISGLASHGHAEEALD---LFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
R++ TWNA++S HA++A D LFR L + + T V C +
Sbjct: 691 SRDLVTWNAILS-----AHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSA 745
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
+ G ++ G++ + G +V++ + G++ EA L M + DVV+W ++ A
Sbjct: 746 AESLHGYAVKI-GLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLR-DVVLWNVMMKAY 803
Query: 396 KNHG 399
+ G
Sbjct: 804 VDTG 807
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/436 (36%), Positives = 240/436 (55%), Gaps = 12/436 (2%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATR 70
P I S L D + QL HA+ + + S H S L + + G L A +
Sbjct: 78 PFAIKSASRLPDPLTAGAQL---HARSLKLPSHSNPHVLTSLLNLY---ARCGRLHDAQK 131
Query: 71 LFNSI-QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
F+ + Q P+ W LI A + +AI + + +G P+ T VL AC+ V
Sbjct: 132 AFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVA 191
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
L +++ T K G+ ++ V V Y +++ AR VFD+++N+ + W M+
Sbjct: 192 DLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVG 251
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GYA + EAL LF M +EG P+ T+A LSAC + G L+LG +V ++
Sbjct: 252 GYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLG 311
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+LGTAL+ MY K G+ +A +F M R+I WNAMI GL GH + A L +++
Sbjct: 312 NPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQMK 371
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
K + ND TF+G+L +C H G + GR+ F +M ++Y I P+IEHYG MVDLL R G +
Sbjct: 372 KSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLL 431
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EA +LI+ M + + V+WGALL CK H N ++AE V+K++I LEP N G YVVLSN+Y
Sbjct: 432 QEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVLKQLIQLEPWNSGNYVVLSNIY 491
Query: 430 AEA----ESMKMQLEI 441
+ + ++ K++LE+
Sbjct: 492 SNSGRWEDAAKLRLEM 507
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 171/358 (47%), Gaps = 43/358 (12%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
ALSSSG + R + + +P+H T
Sbjct: 52 ALSSSGLHLHVLRFHSHLPNPSHL-----------------------------------T 76
Query: 118 FTFVLKACSNVRS-LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
F F +K+ S + L Q+H K + HV+ L+ Y+ L++A++ FDE+
Sbjct: 77 FPFAIKSASRLPDPLTAGAQLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQKAFDEM 136
Query: 177 RNRTLNV-WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
R V WT +I+ Y + R EA+ + G P+S T VL+ACA+ L G
Sbjct: 137 RQPPSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVADLVTG 196
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
E+V + G + TA V +Y K G + KA+ +FD M +++ W AM+ G AS+
Sbjct: 197 EEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNKDVVAWGAMVGGYASN 256
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK--RVYGIEPKI 353
GH EAL+LF ++ E + P+ T G LSAC G +D+GR++ G ++ V G P +
Sbjct: 257 GHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLG-NPVL 315
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++D+ +CG EA + ++M + D+++W A++ G+ ++A +V ++
Sbjct: 316 G--TALIDMYAKCGSTGEAWMVFQKMRNR-DIIVWNAMILGLGMTGHEKIAFALVGQM 370
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 238/429 (55%), Gaps = 13/429 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G L A +F+ + W +LI A A D+AI L+ M R G +P+ T T
Sbjct: 44 AKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTIT 103
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
VL AC+ SL K +H ++ ++ + ++ V N L+ Y+ + +A VF E+ +
Sbjct: 104 TVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK 163
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W TMI GY+++ NEAL LF M++E +P+ TLA +L ACA L+ G++VH
Sbjct: 164 DIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVH 222
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ GF + ALV MY K G A+ LFD +P +++ TW MI+G HG
Sbjct: 223 GHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGN 282
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
A+ F ++ + I P++++F+ +L AC H+G +D G + F M+ ++PK+EHY C+
Sbjct: 283 NAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACI 342
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R GK+ A + IK M +PD +WGALL+ C+ H ++++AE+V + + LEP N
Sbjct: 343 VDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENT 402
Query: 420 GVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDFESPPTNLTPNRSTPFV 479
G YV+L+N YAEAE + +++ L ++ GL ++P + +S +
Sbjct: 403 GYYVLLANTYAEAEKWE-EVKKLRQKIGRRGLK-----------KNPGCSWIEVKSKVHI 450
Query: 480 LLNGNNTIP 488
L GN++ P
Sbjct: 451 FLAGNSSHP 459
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 147/279 (52%), Gaps = 3/279 (1%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+L+AC+N ++ + +H K+ + N L+ Y+ L+ A VFD + RT
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ WT++I+ YA+ ++EA+ LF +M EG P+ T+ +VL ACA +G LE G+ VH
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+++ + + AL+ MY K G++ A ++F MP ++I +WN MI G + + E
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL LF + E + P+ T +L AC +D G+++ G + R G + +V
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILR-NGFFSDQQVANALV 241
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
D+ +CG + A L+ M+ D++ W ++A HG
Sbjct: 242 DMYVKCGVPVLA-RLLFDMIPTKDLITWTVMIAGYGMHG 279
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
+ S+L ACA G + LG VH L+ MY K G L A +FD M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
R + TW ++I+ A G ++EA+ LF ++++E + P+ T VL AC G ++ G+
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ + R ++ I ++D+ +CG + +A + M K D++ W ++
Sbjct: 121 VHNYI-RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG 174
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 239/444 (53%), Gaps = 39/444 (8%)
Query: 32 KQIHAQMI---ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
K++H ++ + S + A ++ + C L + A +F+ + F WN +I
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGL-----MDMARGVFDRRCKEDVFSWNLMIS 209
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+++I L + M R +P T VL ACS V+ + CK++H +VS+ +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS-------------- 194
L + N LV Y+ +++ A ++F ++ R + WT+++ GY +
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 195 --------------FRA---NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
RA NE+L +F +M G P+ T+ SVL+ACA G LE+GE
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+ ++ + ++G AL+ MY K G KA+ +F M +R+ TW AM+ GLA++G
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EA+ +F +++ I P+DIT++GVLSAC H+G +D R+ F M+ + IEP + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVD+LGR G V EA E++++M P+ ++WGALL A + H + +AE K+I+ LEP+
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 418 NHGVYVVLSNMYAEAESMKMQLEI 441
N VY +L N+YA + K E+
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREV 593
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 214/442 (48%), Gaps = 48/442 (10%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK+ Q KQ+H+Q I + +L F G +SYA +LF I P+ +WN
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWN 103
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS-NVRSLNCCKQIHTHVSK 143
+I+ + + + LY+NM + G P+ HTF F+L + +L C K++H HV K
Sbjct: 104 NMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL +L+V N LV+ YS+ ++ AR VFD + W MISGY + E++ L
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIEL 223
Query: 204 FDQMLMEGFEPNSVTLASVLSAC---------------------------------AQSG 230
+M P SVTL VLSAC A +
Sbjct: 224 LVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAA 283
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
C E+ V +F M+ ++ I T++V Y + G L A+ FD MP R+ +W MI
Sbjct: 284 CGEMDIAVRIFRSMKARDV--ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
G G E+L++FR+++ ++P++ T V VL+AC H G +++G I + Y +
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI-----KTYIDK 396
Query: 351 PKIEHY----GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
KI++ ++D+ +CG +A+++ M + D W A++ N+G + A +
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVGLANNGQGQEAIK 455
Query: 407 VVKEI--IALEPNNHGVYVVLS 426
V ++ ++++P++ VLS
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLS 477
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 249/473 (52%), Gaps = 77/473 (16%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALS------SSGDLSYATRLFNSIQSPNHFMWN 84
LKQIHA MI++ + +L+ A+S +S + YA ++F I P+ FMWN
Sbjct: 17 LKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMWN 76
Query: 85 TLIRAQASSLNPDKAIFLY--MNMR---------------------------------RT 109
T IR + S +P A+ LY M+ R R
Sbjct: 77 TYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRL 136
Query: 110 GFAPN---QHTFTFVLKACSNVR----------------------------SLNCCKQIH 138
GF N ++T C +++ L+ +++
Sbjct: 137 GFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKLF 196
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ K DL N ++ Y+ ++ +AR++FDE + + W +I GY
Sbjct: 197 DEMPKR----DLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLNR 252
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV-FVKMRGFEMGAILGTAL 257
EAL LFD+M G P+ VT+ S+LSACA G LE GEKVH ++M ++ +LG AL
Sbjct: 253 EALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNAL 312
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G + KA +F + ++++ +WN++ISGLA HGHAEE+L LFR+++ ++ P++
Sbjct: 313 VDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDE 372
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+TFVGVL+AC HAG +D G + F MK Y IEP I H GC+VD+LGR G + EA I
Sbjct: 373 VTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIA 432
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
M +P+ ++W +LL ACK HG++E+A+R ++++ + + G YV+LSN+YA
Sbjct: 433 SMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYA 485
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Query: 246 GFEMGAILGTAL--VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
GF +L TA+ V + + A +F +P+ + WN I G + A+
Sbjct: 34 GFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVA 93
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
L+ ++++ + P++ TF VL AC +++ G + G + R+ G + ++
Sbjct: 94 LYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRL-GFGSNVVVRNTLLVFH 152
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
+CG + A ++ K DVV W AL+A G++ VA ++ E+ + + V +
Sbjct: 153 AKCGDLKVATDIFDDSD-KGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMI 211
Query: 424 VLSNMYAEAESMK 436
+ + E ES +
Sbjct: 212 TVYTKHGEMESAR 224
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 216/378 (57%), Gaps = 5/378 (1%)
Query: 60 SSSGDLSYATRLFNSIQSP----NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
+S G A LF ++ N WNT+ S N ++A+ L +MR G +
Sbjct: 271 ASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDS 330
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
L ACS++ ++ ++IH +S D +V N L+ YS L +A +F
Sbjct: 331 VATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQS 390
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
R + + W +M+SGY R+ EA LF +ML+ G EPN VT+AS+L CA+ L+ G
Sbjct: 391 TRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHG 450
Query: 236 EKVHVFVKMR-GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
++ H ++ R GF+ +L +LV MY ++G + +AK LFDS+ R+ T+ ++I+G
Sbjct: 451 KEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGI 510
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
G EAL LF +++K I P+ +T V VLSAC H+G + G ++F M YGI P++E
Sbjct: 511 QGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLE 570
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
H+ CMVDL GR G + +A+E+I RM ++P MW LL AC+ HGN E+ E ++++ +
Sbjct: 571 HFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEM 630
Query: 415 EPNNHGVYVVLSNMYAEA 432
P N G YV+++NMYA A
Sbjct: 631 RPENSGYYVLIANMYAAA 648
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 202/441 (45%), Gaps = 46/441 (10%)
Query: 26 KSMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
KS+ Q KQ+H +IIS + H +L+ F ++ L+ A + + + WN
Sbjct: 107 KSLSQGKQLHT-LIISLGFEQHPIIVPKLVTF--YTNFDLLADAHTITENSNILHPLPWN 163
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
LI + + +A+ Y M G P++ T+ VLKAC + K++H ++ S
Sbjct: 164 LLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINAS 223
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
L +L V N LV Y+ + +L+ AR +F+ + R W TMISGYA EA LF
Sbjct: 224 CLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELF 283
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF----------------- 247
+M +EG E N +T ++ C QSG E E + + MR +
Sbjct: 284 GKMRVEGIELNIITWNTIAGGCVQSGNFE--EALELLSHMRSYGIDMDSVATIIGLGACS 341
Query: 248 EMGAI--------------------LGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
+GAI + AL+ MY++ L A LF S +NI TWN+
Sbjct: 342 HIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNS 401
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
M+SG +EEA LFR++ I PN +T +L C + G++ + R
Sbjct: 402 MLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRA 461
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
G + + + +VD+ R GKVLEA+ L + + D V + +L+A G A ++
Sbjct: 462 GFKDYLLLWNSLVDMYARSGKVLEAKRLFDSIS-RRDEVTYTSLIAGYGIQGEGREALKL 520
Query: 408 VKEIIA--LEPNNHGVYVVLS 426
E+ ++P++ + VLS
Sbjct: 521 FDEMKKRHIKPDHVTMVAVLS 541
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 47/341 (13%)
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
N++SL+ KQ+HT + G + +V LV Y+ L +A + + W
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
+IS Y ++ EAL + QM +G P+ T SVL AC + + G+K+H +
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
+ +LV MY K G L+ A+ LF++M ER+ +WN MISG AS G +EA +LF
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFG 284
Query: 307 KLEKEQIVPNDITFVGV-----------------------------------LSACCHAG 331
K+ E I N IT+ + L AC H G
Sbjct: 285 KMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIG 344
Query: 332 FIDVGRQIFGSMKRVY--GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
I +GR+I GS R + G++ ++ + RC + A L + K +++ W
Sbjct: 345 AIKLGREIHGSAIRSFYDGVD---NVKNALITMYSRCKYLRHAYNLFQSTRTK-NIITWN 400
Query: 390 ALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLSNM 428
++L+ + E A + +E++ +EPN YV ++++
Sbjct: 401 SMLSGYTHMDRSEEASFLFREMLLSGIEPN----YVTIASI 437
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/333 (39%), Positives = 206/333 (61%), Gaps = 4/333 (1%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR----CYSVSSDLNN 168
PN+ T+ FVLKAC+ + +LN K +H V K G +++V N LV C +
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
AR+VFDE+ W+ MI GY + R+++A+ LF +M ++G P+ +T+ SVLSAC
Sbjct: 68 ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G LELG+ V +V+ + L AL+ M+ K G + KA LF SM ERNI +W ++
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSV 187
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
I GLA HG EA+ +F ++ + + P+D+ F+G+LSAC H+G +D G++ F SM++ +
Sbjct: 188 IGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFS 247
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
I PKIEHYGCMVD+L R G V EA + ++ M P+ V+W L+ AC+ HG +++ E++
Sbjct: 248 IVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKIT 307
Query: 409 KEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
+++I EP + YV+LSN+YA+ + + I
Sbjct: 308 RQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRI 340
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 44/203 (21%)
Query: 41 SSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAI 100
R+Q + S L + GD+ AT LF S++ N W ++I A +A+
Sbjct: 143 KERVQKNVELSNAL-IDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAV 201
Query: 101 FLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCY 160
++ M R+G P+ F +L ACS+ SGL
Sbjct: 202 AVFEEMVRSGVTPDDVVFIGLLSACSH----------------SGL-------------- 231
Query: 161 SVSSDLNNARQVFDEIRNR-----TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
++ ++ FD +R + + M+ ++ EAL +M + +PN
Sbjct: 232 -----VDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPI---DPN 283
Query: 216 SVTLASVLSACAQSGCLELGEKV 238
V ++++AC G L+LGEK+
Sbjct: 284 PVVWRTLINACRAHGELKLGEKI 306
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 212/368 (57%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F+ ++ + WN +I A + K + L+++M R+ P+ T+ V+
Sbjct: 389 GALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVV 448
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC+ ++LN +IH + KSG+ LD V + LV Y L A ++ D + +T
Sbjct: 449 KACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTV 508
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W ++ISG++ ++ A F QML G P++ T A+VL CA +ELG+++H +
Sbjct: 509 SWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQI 568
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ + LV MY+K G + ++ +F+ P+R+ TW+AMI A HGH E+A+
Sbjct: 569 LKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAI 628
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
LF +++ + PN F+ VL AC H G++D G F M+ YG++P +EHY CMVDL
Sbjct: 629 KLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDL 688
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR +V EA +LI+ M ++ D V+W LL+ CK GN+EVAE+ ++ L+P + Y
Sbjct: 689 LGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAY 748
Query: 423 VVLSNMYA 430
V+L+N+YA
Sbjct: 749 VLLANVYA 756
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 197/393 (50%), Gaps = 7/393 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+H + S D + L A +S A ++FN++ +P +N +I A
Sbjct: 260 QLHGHALKSDFAYDSIIGTATLDMYA--KCDRMSDAWKVFNTLPNPPRQSYNAIIVGYAR 317
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
KA+ ++ +++RT + ++ + + L ACS ++ Q+H K GL ++ V
Sbjct: 318 QDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICV 377
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
N ++ Y L A +FD++ R W +I+ + Q+ + L LF ML
Sbjct: 378 ANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTM 437
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
EP+ T SV+ ACA L G ++H + G + +G+ALV MY K G L +A+
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEK 497
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+ D + E+ +WN++ISG +S +E A F ++ + ++P++ T+ VL C +
Sbjct: 498 IHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMAT 557
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
I++G+QI + ++ + + +VD+ +CG + ++ + ++ K D V W A++
Sbjct: 558 IELGKQIHAQILKL-NLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP-KRDYVTWSAMI 615
Query: 393 AACKNHGNIEVAERVVKE--IIALEPNNHGVYV 423
A HG+ E A ++ +E ++ ++P NH +++
Sbjct: 616 CAYAYHGHGEQAIKLFEEMQLLNVKP-NHTIFI 647
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 200/422 (47%), Gaps = 34/422 (8%)
Query: 12 PLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSS------ 62
P S + KC ++ L KQ HAQMI++S + + A+ L+ F SS+
Sbjct: 3 PTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFK 62
Query: 63 -----------------------GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKA 99
G++ +A LF+++ + WN+L+ + K+
Sbjct: 63 VFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKS 122
Query: 100 IFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC 159
I +++ MR + TF+ VLKACS + Q+H + G + D+ + LV
Sbjct: 123 IEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDM 182
Query: 160 YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
YS L+ A ++F E+ R L W+ +I+GY Q+ R E L LF ML G + T
Sbjct: 183 YSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTY 242
Query: 220 ASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE 279
ASV +CA +LG ++H F +I+GTA + MY K ++ A +F+++P
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPN 302
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
++NA+I G A +AL++F+ L++ + ++I+ G L+AC G Q+
Sbjct: 303 PPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQL 362
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
G + G+ I ++D+ G+CG ++EA + M + D V W A++AA + +
Sbjct: 363 HGLAVKC-GLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAAHEQNE 420
Query: 400 NI 401
I
Sbjct: 421 EI 422
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 23 DKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
D C +M + KQIHAQ++ + D + AS L+ S G++ + +F +
Sbjct: 550 DVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDM--YSKCGNMQDSRLMFEKTPKRD 607
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+ W+ +I A A + ++AI L+ M+ PN F VL+AC+++ ++ K +H
Sbjct: 608 YVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD--KGLHY 665
Query: 140 -HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ +S LD H+ + ++ M+ +S + N
Sbjct: 666 FQIMQSHYGLDPHMEH-----------------------------YSCMVDLLGRSDQVN 696
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
EAL L + M FE + V ++LS C G +E+ EK
Sbjct: 697 EALKLIESM---HFEADDVIWRTLLSNCKMQGNVEVAEK 732
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 239/444 (53%), Gaps = 39/444 (8%)
Query: 32 KQIHAQMI---ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
K++H ++ + S + A ++ + C L + A +F+ + F WN +I
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGL-----MDMARGVFDRRCKEDVFSWNLMIS 209
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+++I L + M R +P T VL ACS V+ + CK++H +VS+ +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS-------------- 194
L + N LV Y+ +++ A ++F ++ R + WT+++ GY +
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 195 --------------FRA---NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
RA NE+L +F +M G P+ T+ SVL+ACA G LE+GE
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+ ++ + ++G AL+ MY K G KA+ +F M +R+ TW AM+ GLA++G
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EA+ +F +++ I P+DIT++GVLSAC H+G +D R+ F M+ + IEP + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVD+LGR G V EA E++++M P+ ++WGALL A + H + +AE K+I+ LEP+
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 418 NHGVYVVLSNMYAEAESMKMQLEI 441
N VY +L N+YA + K E+
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREV 593
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 214/442 (48%), Gaps = 48/442 (10%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK+ Q KQ+H+Q I + +L F G +SYA +LF I P+ +WN
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWN 103
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS-NVRSLNCCKQIHTHVSK 143
+I+ + + + LY+NM + G P+ HTF F+L + +L C K++H HV K
Sbjct: 104 NMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL +L+V N LV+ YS+ ++ AR VFD + W MISGY + E++ L
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIEL 223
Query: 204 FDQMLMEGFEPNSVTLASVLSAC---------------------------------AQSG 230
+M P SVTL VLSAC A +
Sbjct: 224 LVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAA 283
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
C E+ V +F M+ ++ I T++V Y + G L A+ FD MP R+ +W MI
Sbjct: 284 CGEMDIAVRIFRSMKARDV--ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
G G E+L++FR+++ ++P++ T V VL+AC H G +++G I + Y +
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI-----KTYIDK 396
Query: 351 PKIEHY----GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
KI++ ++D+ +CG +A+++ M + D W A++ N+G + A +
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 407 VVKEI--IALEPNNHGVYVVLS 426
V ++ ++++P++ VLS
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLS 477
>gi|242042081|ref|XP_002468435.1| hypothetical protein SORBIDRAFT_01g045890 [Sorghum bicolor]
gi|241922289|gb|EER95433.1| hypothetical protein SORBIDRAFT_01g045890 [Sorghum bicolor]
Length = 506
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 240/439 (54%), Gaps = 52/439 (11%)
Query: 51 SRLLAFCALSSSGDLSYATRLFNSIQSP------NH--FMWNTLIRAQASSLNPDKAIFL 102
++LL F A+S +GDL +A+ L S+ P +H F +NTLIR A S +P I L
Sbjct: 46 AKLLRFAAVSPAGDLRHASVLL-SLHLPFISAAASHLAFFYNTLIRGFAVSSSPSAGIEL 104
Query: 103 YMNMRRTGFAPNQHTFTFVLKACSNVRS-----LNCCKQIHTHVSKSGLDLDLHVVNCLV 157
+ MRR G AP+ TFTFVLK+CS S + Q H S +HV N L+
Sbjct: 105 FTAMRRAGAAPDAFTFTFVLKSCSRCHSPGRLPSDLHAQAFKHGCLSARSEHVHVHNALL 164
Query: 158 RCYSVSS-------------------------------DLNNARQVFDEIRNRTLNVWTT 186
Y+ S L++AR VFD++ +R + WT
Sbjct: 165 HAYASRSAVDDAHRVFDEMPVRDVVSFSGLLTAHLKNNQLDSARMVFDQMPHRDVVSWTA 224
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MIS YA++ R +AL LFD M ++ P+ VT+ SV+SAC G L GE++ ++V G
Sbjct: 225 MISAYARASRPQDALALFDAMPVQ---PDEVTMVSVVSACTALGDLATGERLRLYVDSNG 281
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
F L AL+ MY K G L +A+ LFD M R++A+WN +I ASHG E + LF
Sbjct: 282 FGWMVSLRNALMDMYAKCGCLPEARELFDGMAIRSLASWNTLILAYASHGDEESTIALFH 341
Query: 307 KL--EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYG-IEPKIEHYGCMVDL 362
++ + P+ +T + VL+ H G ++ GR +F +M+R YG +E +EHYGCMVDL
Sbjct: 342 QMLAHDNSVKPDGVTLLAVLTMYAHKGCVEEGRTVFDAMQRGDYGKVELTVEHYGCMVDL 401
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G + EA ++I++M + V+WG LL AC+ HGNI++AE+ V+++ L P+ G Y
Sbjct: 402 LSRAGHLEEAYKMIEQMSIPSNDVVWGVLLGACRMHGNIDMAEKAVQKLRILNPHEGGYY 461
Query: 423 VVLSNMYAEAESMKMQLEI 441
++L +MY A +E+
Sbjct: 462 ILLIDMYTAAGRTAEAMEV 480
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 191/286 (66%)
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
DL N ++ Y+V D+ AR++FD R+R W++MIS YA+ + EAL L+ +M
Sbjct: 146 DLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMR 205
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+ G P+ +++ SVLSAC+ G L +G +VH FV+ E+ LGTALV MY K G +
Sbjct: 206 VAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIE 265
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+ +F +MP +++ TW++MI GLA+HG +AL LF ++ + + PN+ITF+GVL AC
Sbjct: 266 NSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACT 325
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G ++ G++ F SM V+G+ P++EHYGCMVDLLGR G V EA ELI+ M +KPD ++W
Sbjct: 326 HVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIW 385
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
LL AC+ H N+E+AE + ++ L+P G YV+LSN+YA+A S
Sbjct: 386 RTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANS 431
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GD+ A +F+ + + F W+++I A A +A+ L+ MR G AP+ + VL
Sbjct: 161 GDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVL 220
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
ACS + +L ++H V + +++D+ + LV Y+ D+ N+ +VF + + +
Sbjct: 221 SACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVL 280
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W++MI G A ++AL LF +M+ +G +PN +T VL AC G + G+K
Sbjct: 281 TWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKY---- 336
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
M +G + + + + M+ L GH EEA+
Sbjct: 337 --------------FSSMSDVHGVVPR------------MEHYGCMVDLLGRAGHVEEAM 370
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
+L R + P+ I + +L AC +++ + +K
Sbjct: 371 ELIRSM---TFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLK 409
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 39/193 (20%)
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH----------------------- 297
Y G +A+A+ +FD M R++ +WN MI G A G
Sbjct: 126 YVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMI 185
Query: 298 --------AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI--FGSMKRVY 347
++EAL+L+R++ + P+ I+ V VLSAC G + +G ++ F RV
Sbjct: 186 SAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRV- 244
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
E ++ +VD+ +CG + + ++ M K DV+ W +++ NHG A +
Sbjct: 245 --EVDMKLGTALVDMYAKCGDIENSLKVFHAMPVK-DVLTWSSMIIGLANHGLGHDALSL 301
Query: 408 VKEIIA--LEPNN 418
E+I+ L+PN
Sbjct: 302 FSEMISQGLQPNE 314
>gi|449443185|ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 237/422 (56%), Gaps = 13/422 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ +H +++ + D + +S LL S GDL+ ++F I N W +LI
Sbjct: 125 QSVHNRIVKTGFELDVYTSSCLLNMYV--SCGDLNSGLKVFEFIPKWNVVAWTSLIAGFV 182
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD---- 147
++ P +A+ L+ +M G PN+ T T L A + R ++ K +H + + G D
Sbjct: 183 NNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQLGFDPFDT 242
Query: 148 ---LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
++ + ++ Y+ L AR +FD++ R L VW +MIS Y+Q R EAL LF
Sbjct: 243 NSCFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLF 302
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
M M GF PN T SV+SAC G G +H F +GTAL+ MY K
Sbjct: 303 VDMEMAGFVPNKATFLSVISACTHMGFRSTGRSLHARALRASFHEFVAIGTALMDMYAKA 362
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGV 323
G A +F + ++++ W MISGLA G +EAL++FR++E+E ++ P+ IT++ V
Sbjct: 363 GDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQITYIAV 422
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC H G ++ G++ F SM VYGIEP +EHYGCM+DLL R G EAEEL+ +M +P
Sbjct: 423 LWACSHLGLVEEGQKQFTSMTEVYGIEPTMEHYGCMIDLLSRAGHSKEAEELLMKMPTQP 482
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA---ESMKMQLE 440
+ + ++L C+ +GN+ +A RV I+ LE ++ GVYV+LSN++A+A + MK+ +
Sbjct: 483 NATILSSILNGCEMYGNVGLANRVKSHIVELENSSSGVYVLLSNIHAKACNWQEMKLARD 542
Query: 441 IL 442
+L
Sbjct: 543 ML 544
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 219/396 (55%), Gaps = 9/396 (2%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
+KCK+M +LKQIH+ MI +S +++ SRL+ FCA S GD+ YA +F+ I ++
Sbjct: 13 EKCKTMKELKQIHSLMITTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQINQRTVYI 72
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN++I+ + + A+F+Y M+R GF+P+ TF FVLK CS + L + +H +
Sbjct: 73 WNSMIKGYCNGGDKFGALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLVYGQSVHNRIV 132
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K+G +LD++ +CL+ Y DLN+ +VF+ I + WT++I+G+ + + EAL
Sbjct: 133 KTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNNDQPKEALR 192
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE-------MGAILGT 255
LF M EG EPN +T+ + L+A A+ + G+ VH ++ GF+ IL T
Sbjct: 193 LFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLRQLGFDPFDTNSCFNVILAT 252
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
A++ MY K G L A+ LFD MP+RN+ WN+MIS + +G EAL LF +E VP
Sbjct: 253 AIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLFVDMEMAGFVP 312
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
N TF+ V+SAC H GF GR + R + ++D+ + G A ++
Sbjct: 313 NKATFLSVISACTHMGFRSTGRSLHARALRA-SFHEFVAIGTALMDMYAKAGDADTALKI 371
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++ K DV+ W +++ G + A V + +
Sbjct: 372 FSKLR-KKDVMAWTTMISGLAIQGKGKEALNVFRRM 406
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 230/409 (56%), Gaps = 4/409 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ +++HA MI + + + +RLL F L A ++ + + N W
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC--LEDARKVLDEMPEKNVVSWTA 123
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + + + +A+ ++ M R+ PN+ TF VL +C L KQIH + K
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D + V + L+ Y+ + + AR++F+ + R + T +I+GYAQ EAL +F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
++ EG PN VT AS+L+A + L+ G++ H V R A+L +L+ MY+K G
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVL 324
L+ A+ LFD+MPER +WNAM+ G + HG E L+LFR + E+ V P+ +T + VL
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 325 SACCHAGFIDVGRQIF-GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
S C H D G IF G + YG +P EHYGC+VD+LGR G++ EA E IKRM KP
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 423
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ G+LL AC+ H ++++ E V + +I +EP N G YV+LSN+YA A
Sbjct: 424 TAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASA 472
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 192/365 (52%), Gaps = 18/365 (4%)
Query: 70 RLFNSIQSPNHFMWNTLIR-AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R F+S SP +++ T++ +Q S + L M M G H + +L AC +
Sbjct: 10 RSFSS--SPTNYVLQTILPISQLCSNGRLQEALLEMAM--LGPEMGFHGYDALLNACLDK 65
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
R+L +++H H+ K+ ++ L+ Y L +AR+V DE+ + + WT MI
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
S Y+Q+ ++EAL +F +M+ +PN T A+VL++C ++ L LG+++H + ++
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+G++L+ MY K G + +A+ +F+ +PER++ + A+I+G A G EEAL++F +L
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC----MVDLLG 364
E + PN +T+ +L+A +D G+Q + + ++ Y ++D+
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYAVLQNSLIDMYS 300
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAE--RVVKEIIALEPNNHGV 421
+CG + A L M + + W A+L HG EV E R++++ ++P+ +
Sbjct: 301 KCGNLSYARRLFDNMPERT-AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Query: 422 YVVLS 426
VLS
Sbjct: 360 LAVLS 364
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 204/359 (56%), Gaps = 31/359 (8%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
MR P+ T +FVLKAC + + K IH K G +L + N ++ Y + +
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 166 LNNARQVFDEIRNR---TLNV----------------------------WTTMISGYAQS 194
+ +A +F+++ R T N+ WT+MISG+ Q
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+ NEA+ LF ++ E PN VT+ SVL+ACA G L+LG VH + GF+ +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
L+ MY K G L A+ +F M ER + +W+AMI+GLA HG AEEAL LF ++ K +
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN +TF+G+L AC H G ID GR+ F SM YG+ P+IEHYGC+VDL R G + EA E
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
I M KP+ V+WGALL CK H NI++AE +K + L+P N G YVV+SN+YAEAE
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAE 359
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 11/280 (3%)
Query: 38 MIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
M++ ++ A + + L+ GD+ A F + + N W ++I P+
Sbjct: 65 MLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPN 124
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
+AI L+M + PN+ T VL AC+++ L+ + +H + +KSG ++HV N L+
Sbjct: 125 EAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLI 184
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
Y L NAR+VF E+ RT+ W+ MI+G A +A EAL LF +M+ G +PN V
Sbjct: 185 DMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGV 244
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT----ALVHMYTKNGALAKAKAL 273
T +L AC+ G ++ G + F M + G I +V ++++ G L +A
Sbjct: 245 TFIGLLHACSHMGLIDEGRR--FFASMTA-DYGVIPQIEHYGCVVDLFSRAGLLEEAHEF 301
Query: 274 FDSMPER-NIATWNAMISGLASHGH---AEEALDLFRKLE 309
SMP + N W A++ G H + AEEA+ +L+
Sbjct: 302 ILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELD 341
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 238/450 (52%), Gaps = 34/450 (7%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
P L A + K +H +H +I +S D F + L+ F S + DL++ R+F +
Sbjct: 176 FPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAH--RVFTN 233
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ + WN +I A A PDKA+ L+ M PN T VL AC+ L
Sbjct: 234 MPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFG 293
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+ I +++ +G L + N ++ Y +N+A+ +F+++ + + WTTM+ G+A+
Sbjct: 294 RWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKL 353
Query: 195 FRANEALMLFDQM----------LMEGFE----------------------PNSVTLASV 222
+EA +FD M L+ +E P+ VTL
Sbjct: 354 GNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICA 413
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
L A AQ G ++ G +HV++K + L T+L+ MY K G L KA +F ++ +++
Sbjct: 414 LCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDV 473
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
W+AMI LA +G + ALDLF + + I PN +TF +L AC HAG ++ G Q+F
Sbjct: 474 YVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQ 533
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+ +YGI P+I+HY C+VD+ GR G + +A I++M P +WGALL AC HGN+E
Sbjct: 534 MEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVE 593
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+AE + ++ LEP NHG +V+LSN+YA+A
Sbjct: 594 LAELAYQNLLELEPCNHGAFVLLSNIYAKA 623
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 221/430 (51%), Gaps = 37/430 (8%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
D+C + QLKQIHA M+ +SR D + AS+LL A+SS L YA +FN I PN +
Sbjct: 80 DQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYC 139
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WNTLIR ASS +P ++ ++++M + PN+ TF F+ KA S ++ L+ +H V
Sbjct: 140 WNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMV 199
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K+ L DL ++N L+ Y S + A +VF + + + W MI+ +A ++AL
Sbjct: 200 IKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKAL 259
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
+LF +M M+ +PN +T+ SVLSACA+ LE G + +++ GF IL A++ MY
Sbjct: 260 LLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMY 319
Query: 262 TKNGALAKAKALFDSMPERNI-------------------------------ATWNAMIS 290
K G + AK LF+ M E++I A WNA+IS
Sbjct: 320 VKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALIS 379
Query: 291 GLASHGHAEEALDLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
+G AL LF +++ + P+++T + L A G ID G I +K+ + I
Sbjct: 380 AYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKK-HDI 438
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
++D+ +CG + +A E+ V + DV +W A++ A +G + A +
Sbjct: 439 NLNCHLATSLLDMYAKCGNLNKAMEVF-HAVERKDVYVWSAMIGALAMYGQGKAALDLFS 497
Query: 410 EIIA--LEPN 417
++ ++PN
Sbjct: 498 SMLEAYIKPN 507
>gi|359496160|ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Vitis vinifera]
Length = 561
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 248/441 (56%), Gaps = 34/441 (7%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P P +L + L+Q+HA +I+S + ++LL ++G + Y +L
Sbjct: 16 PSHSPAYQVLLHAGPRLKPLQQVHAHLIVSGSYRSRALLTKLLT--LACTAGSILYTRQL 73
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F SI +P+ F++N +I+A + AI Y M + +TFT V+KAC+++ +L
Sbjct: 74 FFSITNPDSFLFNAIIKASSKFGFSCDAILFYRRMVADSIPQSNYTFTAVIKACADISAL 133
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ IH+HV G D D V L+ Y+ S D+ A++VFD + RT+ W +MISGY
Sbjct: 134 RIGRPIHSHVLVCGYDSDSFVQAALIAFYAKSGDVGEAKKVFDRMPERTIIAWNSMISGY 193
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
Q+ + EA+ LF +M G E +S T SVLSAC+QSG L+LG VH ++ F++
Sbjct: 194 DQNGFSKEAVGLFYRMRELGVEFDSATFVSVLSACSQSGALDLGCWVHDYIVNNSFDVNV 253
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+LGT+L++MYT+ G ++KA+ +FD M ERN+ W AMISG HG+ EA++LFR +
Sbjct: 254 VLGTSLINMYTRCGNVSKAREVFDEMNERNVVAWTAMISGYGMHGYGREAIELFRLM--- 310
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
+I G M++ YG+ P++EH+ CMVD+LGR G + E
Sbjct: 311 --------------------------RIHG-MRQDYGLVPRVEHHVCMVDMLGRAGFLNE 343
Query: 372 AEELIKRMVWKPDV-VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
A + IK + +W A+L ACK H N+++ +V + ++A EP N YV+LSN+YA
Sbjct: 344 AFQYIKDLKQGEQAPALWTAMLGACKMHKNLDLGVQVAEHLLAAEPENPSHYVLLSNVYA 403
Query: 431 EAESMKMQLEILLVQVLFAGL 451
A M+ ++E++ ++ GL
Sbjct: 404 LAGRME-RVEMVRNMMIRKGL 423
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 226/415 (54%), Gaps = 5/415 (1%)
Query: 25 CKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C + Q+K +IH +I+ + A+ L + G++ RLF S+ +
Sbjct: 208 CADLRQVKYGREIHTHVIVKGFAAILWVANSLATM--YTECGEMQDGLRLFESMSERDVV 265
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
+W +LI A +KA+ ++ MR + +PN+ TF AC+++ L +Q+H +V
Sbjct: 266 LWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNV 325
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
GL L V N +++ YS + L++A +F +R R + W+T+I GY+Q+ E
Sbjct: 326 FSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECF 385
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
F M G +P LAS+LS LE G +VH G E + +AL++MY
Sbjct: 386 KYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMY 445
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+K G++ +A +F+ +I + AMI+G A HG EEA+DLF K K P+D+TF+
Sbjct: 446 SKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFI 505
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
VL+AC H+G +D+G Q F M+ Y + P EHYGCMVDLL R G++ +AE++I M W
Sbjct: 506 SVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPW 565
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
K D V+W LL ACK G++E R + I+ L+P + V L+N+++ + K
Sbjct: 566 KKDDVVWTTLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWK 620
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 158/337 (46%), Gaps = 5/337 (1%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT--GFAPNQH 116
L SG L A ++F+ + + W +++ ++ P++A+ L+ MR G + + +
Sbjct: 38 LIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTY 97
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
+ LKAC ++ + +H + K+ L + V + L+ Y ++ + +VF E+
Sbjct: 98 VLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEM 157
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQM-LMEGFEPNSVTLASVLSACAQSGCLELG 235
R WT I+G + E L F QM + ++ A L ACA ++ G
Sbjct: 158 PFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYG 217
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
++H V ++GF + +L MYT+ G + LF+SM ER++ W ++I+
Sbjct: 218 REIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRI 277
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G E+A++ F + Q+ PN+ TF +AC + G Q+ G++ + G+ +
Sbjct: 278 GQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSL-GLGDSLSV 336
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
M+ + C K+ A L + M + D++ W ++
Sbjct: 337 SNSMMKMYSTCAKLDSASVLFQGMRCR-DIISWSTII 372
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 3/343 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQA-SSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
G + + R+F + N W I + L+ + + R + + F
Sbjct: 145 GKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIA 204
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
LKAC+++R + ++IHTHV G L V N L Y+ ++ + ++F+ + R +
Sbjct: 205 LKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDV 264
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
+WT++I+ Y + + +A+ F M PN T AS +ACA L GE++H
Sbjct: 265 VLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGN 324
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
V G + +++ MY+ L A LF M R+I +W+ +I G + EE
Sbjct: 325 VFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEEC 384
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
F + + P D +LS ++ GRQ+ ++ G+E +++
Sbjct: 385 FKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVH-ALALYLGLEQNPTIRSALIN 443
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ +CG ++EA ++ + + D+V A++ HG E A
Sbjct: 444 MYSKCGSIIEASKVFEEKD-RTDIVSLTAMINGYAEHGKCEEA 485
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 119/245 (48%), Gaps = 5/245 (2%)
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME--GFEPNSVTLA 220
S L ARQVFD++ R + WT ++ GY + + EAL+LF M ++ G ++ L+
Sbjct: 41 SGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLS 100
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
L AC QS + GE +H + + +G+AL+ MY + G + K+ +F MP R
Sbjct: 101 VALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFR 160
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFVGVLSACCHAGFIDVGRQI 339
N TW A I+GL G E L F ++ + +Q+ + F L AC + GR+I
Sbjct: 161 NSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREI 220
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ V G + + + CG++ + L + M + DVV+W +L+ A G
Sbjct: 221 HTHVI-VKGFAAILWVANSLATMYTECGEMQDGLRLFESMS-ERDVVLWTSLITAYIRIG 278
Query: 400 NIEVA 404
E A
Sbjct: 279 QEEKA 283
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 211/368 (57%), Gaps = 2/368 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A ++F+S + W+T+I ++ +K I M G P+ ++ V+
Sbjct: 390 GHLGTANKIFHSFHKSSE-DWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVI 448
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+CS V ++N + IH + K+ + ++ V N L+ Y S + ++F R +
Sbjct: 449 SSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVI 508
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W T+IS Y QS EA++LFD+M+ E PN VT VLSACA L+ GEK+H ++
Sbjct: 509 SWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYI 568
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
K GFE + TAL+ MY K G L ++ LF+S ER++ WN MIS HGH E A+
Sbjct: 569 KENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAM 628
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
++F+ +E+ I PN TF+ +LSAC H G + GR +F M++ YGIEP ++HY ++DL
Sbjct: 629 EIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQK-YGIEPSLKHYASIIDL 687
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G + AE L+ M PD +WG+LL+ACK H EV R+ + I +P N G Y
Sbjct: 688 LGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYY 747
Query: 423 VVLSNMYA 430
++LS++Y+
Sbjct: 748 IILSDLYS 755
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 184/409 (44%), Gaps = 18/409 (4%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
+ L Q H+ +I + + F A++L+AF A +++T LF I S + F+WN++
Sbjct: 52 TFQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKP--AFSTHLFRLIHSKDIFLWNSI 109
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I++ S+ + +A Y+ MR + PNQ T V+ C+ + N IH SK GL
Sbjct: 110 IQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGL 169
Query: 147 DLDLHVV-NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ + + + YS + +A +F EI + + WT +I GY Q+ + L
Sbjct: 170 FVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLF 229
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M G PN T+ S AC L G+ +H GF ++ + ++ MY++ G
Sbjct: 230 EMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCG 289
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ +A F + ++++ +W ++I+ + G E L LF +++ +I+P++I +L
Sbjct: 290 SPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLM 349
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-----CMVDLLGRCGKVLEAEELIKRMV 380
++ I G+ + + I H C LG K+ +
Sbjct: 350 GFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHS-------- 401
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL--EPNNHGVYVVLSN 427
+ W ++ N G E ++E++ L EP+ + + V+S+
Sbjct: 402 FHKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISS 450
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 151/315 (47%), Gaps = 16/315 (5%)
Query: 4 KCSSLRQPPLPI---PPLSLLADKCKSMHQL------KQIHAQMIISSRIQDHFAASRLL 54
KC S + L + P L+ L S Q+ + IH I +S I++ A+ L+
Sbjct: 424 KCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLM 483
Query: 55 AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
SG ++ R+F+ + WNTLI + S +AI L+ M + PN
Sbjct: 484 DM--YGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPN 541
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T VL AC+++ SL+ ++IH ++ ++G + ++ + L+ Y+ +L +R++F+
Sbjct: 542 KVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFN 601
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
R + +W MIS Y A+ +F M +PN+ T S+LSAC +G +
Sbjct: 602 STEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTG--HV 659
Query: 235 GEKVHVFVKMR--GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT-WNAMISG 291
E H+F +M+ G E +++ + ++G+L A+AL SMP T W +++S
Sbjct: 660 LEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSA 719
Query: 292 LASHGHAEEALDLFR 306
H E + L R
Sbjct: 720 CKIHNEFEVGVRLAR 734
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 241/434 (55%), Gaps = 20/434 (4%)
Query: 9 RQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFA-ASRLLAFC---ALSSSGD 64
+ P LP P +C ++ L Q+HA + S +Q H A +RLL C +
Sbjct: 31 QHPLLPYLP------QCTTLRALAQLHAAAVKSG-LQAHPAFVTRLLTLCTDQGAAKPAQ 83
Query: 65 LSYATRLFNSIQSPNHFMW-NTLIR-----AQASSLNP--DKAIFLYMNMRRTGFAPNQH 116
LSYA ++F+ I P +W NTL+R + A P ++A +++ M G AP+ +
Sbjct: 84 LSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTY 143
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
TF +LKAC+ R+ +Q H K G +V+ L+ Y+ D AR +F +
Sbjct: 144 TFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRV 203
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+ + MI+ +S R EAL+LF +M +G + SVTL SVLSACA G LELG
Sbjct: 204 DGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGR 263
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H +V+ + + TAL+ MY K G+L A ++F M R+ W+ MI A+H
Sbjct: 264 WIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHS 323
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ EA+ LF +++K+ I P+D+TF+GVL AC H+G + G Q F SM R +G+ P I+HY
Sbjct: 324 YGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSM-REFGLVPGIKHY 382
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
GC+ DLL R G++ A E I + KP ++W LL+AC + G+ ++ ++V + I+ L+
Sbjct: 383 GCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDD 442
Query: 417 NNHGVYVVLSNMYA 430
++ G YV+ SN+ A
Sbjct: 443 SHGGDYVIFSNLCA 456
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 239/468 (51%), Gaps = 52/468 (11%)
Query: 10 QPPLPIPPLS--------LLADK-------CKSMHQLKQIHAQMIISSRIQDHFAASRLL 54
QP LP S L AD+ C ++ + ++HA + + D RL
Sbjct: 15 QPVLPSSSASTGGQQHGVLTADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQ 74
Query: 55 AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
A S DL+ L P + + I A +S A+ L M G P
Sbjct: 75 RAYAASDRLDLT--VTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPT 132
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV---------------------- 152
HT + L AC L + +H + K L D +V
Sbjct: 133 SHTLSSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFD 189
Query: 153 ---------VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
V ++ CY+ L++AR++FD + ++ W MI GY Q R NEAL L
Sbjct: 190 EMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRL 249
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK-MRGFEMGAILGTALVHMYT 262
F ML G +P+ V + LSA AQ G E G +H +VK R ++ A +GTAL+ MY
Sbjct: 250 FRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYC 309
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G+L A ++F+S+ +++I WNAMI+G A HG + +AL++F +L + + P DITF+G
Sbjct: 310 KCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIG 369
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+L+AC H+G +D G Q F SM+ Y I PKIEHYGCMVDLLGR G + EA L++ M
Sbjct: 370 LLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIA 429
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
PD VMW +LLAAC+ H N+ + +++ ++A N G+Y++LSN+YA
Sbjct: 430 PDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYA 477
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 239/468 (51%), Gaps = 52/468 (11%)
Query: 10 QPPLPIPPLS--------LLADK-------CKSMHQLKQIHAQMIISSRIQDHFAASRLL 54
QP LP S L AD+ C ++ + ++HA + + D RL
Sbjct: 14 QPVLPSSSASTGGQQHGVLTADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQ 73
Query: 55 AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
A S DL+ L P + + I A +S A+ L M G P
Sbjct: 74 RAYAASDRLDLT--VTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPT 131
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV---------------------- 152
HT + L AC L + +H + K L D +V
Sbjct: 132 SHTLSSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFD 188
Query: 153 ---------VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
V ++ CY+ L++AR++FD + ++ W MI GY Q R NEAL L
Sbjct: 189 EMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRL 248
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK-MRGFEMGAILGTALVHMYT 262
F ML G +P+ V + LSA AQ G E G +H +VK R ++ A +GTAL+ MY
Sbjct: 249 FRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYC 308
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G+L A ++F+S+ +++I WNAMI+G A HG + +AL++F +L + + P DITF+G
Sbjct: 309 KCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIG 368
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+L+AC H+G +D G Q F SM+ Y I PKIEHYGCMVDLLGR G + EA L++ M
Sbjct: 369 LLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIA 428
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
PD VMW +LLAAC+ H N+ + +++ ++A N G+Y++LSN+YA
Sbjct: 429 PDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYA 476
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 230/413 (55%), Gaps = 4/413 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
S+ Q ++ + I R++ D + A L+ + G L A ++F + N +W
Sbjct: 127 SLFQGAKLFHSLAIKLRLEGDPYVAPALMN--VYTELGSLEEAHKVFEEVPLKNSVIWGV 184
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH-THVSKS 144
+I+ + L+ MRR+GF + +++AC NV + K H + K+
Sbjct: 185 MIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKN 244
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
+D + + LV Y L+ A ++F+EI R + VW+ +I+G+A++ RA E++ +F
Sbjct: 245 FIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMF 304
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
QML + PNSVT AS++ AC+ G L+ G VH ++ G E+ T+ + MY K
Sbjct: 305 RQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKC 364
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + A +F +PE+N+ +W+ MI+G HG EAL+LF ++ +PN +TFV VL
Sbjct: 365 GCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVL 424
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
SAC H+G I+ G F SM R YGI P EHY CMVDLLGR GK+ EA I M +P
Sbjct: 425 SACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPG 484
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKM 437
WGALL AC+ H E+AE V K+++ LE + GVYV+LSN+YA+ +M
Sbjct: 485 ASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEM 537
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 186/398 (46%), Gaps = 14/398 (3%)
Query: 12 PLPIPPLSL---------LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
P P PP+S L K++ Q++AQ+++++ + + F A
Sbjct: 3 PNPFPPISSRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGP--MIFGAYIQL 60
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A++ FN I N WNT++ + + + + L+ M + G + F +
Sbjct: 61 GSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAV 120
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC + K H+ K L+ D +V L+ Y+ L A +VF+E+ +
Sbjct: 121 KACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSV 180
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VF 241
+W MI G+ LF +M GFE + + ++ AC + G+ H +
Sbjct: 181 IWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLC 240
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+K + L T+LV MY K G L A LF+ + R++ W+A+I+G A +G A E+
Sbjct: 241 IKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALES 300
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+ +FR++ + + PN +TF ++ AC G + GR + G M R G+E +++Y +D
Sbjct: 301 ISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIR-NGVELDVKNYTSFID 359
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ +CG ++ A + ++ K +V W ++ HG
Sbjct: 360 MYAKCGCIVTAYRVFCQIPEK-NVFSWSTMINGFGMHG 396
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 231/448 (51%), Gaps = 32/448 (7%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN 73
P+ ++ + Q +I I+ +I + S +G ++ A LF+
Sbjct: 318 PVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFD 377
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+ N W +I A + ++A+ L + R+G P+ + T + ACSN+ +L
Sbjct: 378 KMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALET 437
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF-------------------- 173
Q+H+ K G + N L+ Y ++ ARQVF
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497
Query: 174 ----DEIRNRTLNV-------WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
DE RN N+ WTT+IS YA + ++NEA+ F M E PNS L +
Sbjct: 498 NDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTIL 557
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
L C G ++G+++H G + I+ AL+ MY K G A ++ +FD M ER+I
Sbjct: 558 LGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDI 616
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TWN +I+G A HG EA+ +++ +E ++PN++TFVG+L+AC HAG +D G + F S
Sbjct: 617 FTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKS 676
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M + YG+ P EHY CMVDLLGR G V AE+ I M +PD V+W ALL ACK H N E
Sbjct: 677 MSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAE 736
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ +R +++ +EP+N G YV+LSN+Y+
Sbjct: 737 IGKRAAEKLFRIEPSNAGNYVMLSNIYS 764
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 176/369 (47%), Gaps = 18/369 (4%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF + N W +I N KA ++ M R G P+Q F L A
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV-SSDLNNARQVFDEIRNRTLNVWTT 186
+ +L+ + + K+G + D+ + ++ YS +S L+ A + F+ + R W+T
Sbjct: 237 LGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MI+ + R + A+ ++++ ++ + ++++ AQ C + + +F ++
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRT----ALITGLAQ--CGRIDDARILFEQIP- 349
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
E + AL+ Y +NG + +AK LFD MP RN +W MI+G A +G +EEAL L +
Sbjct: 350 -EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQ 408
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC--MVDLLG 364
+L + ++P+ + + AC + ++ G Q+ +V + + C ++ + G
Sbjct: 409 ELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKV---GCQFNSFACNALITMYG 465
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+C + A ++ RMV K D+V W + LAA + ++ A +++ + + +
Sbjct: 466 KCRNMEYARQVFSRMVTK-DIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVS---WTT 521
Query: 425 LSNMYAEAE 433
+ + YA AE
Sbjct: 522 IISAYAHAE 530
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 187/412 (45%), Gaps = 57/412 (13%)
Query: 31 LKQIHAQMIIS---SRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
++ H ++ +S +RI+D L G + A +F+++ + WN++I
Sbjct: 25 VRHAHGELEVSGCSARIRD------------LGRLGRVGEAREVFDAMPRRDIIAWNSMI 72
Query: 88 RAQASSLNPDKAIFLY-----MNMRR-----TGFA------PNQHTFTFVLKACSNVRSL 131
A + PD A LY NMR +G+ + F +L+ N +
Sbjct: 73 SAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLE--RNTVAW 130
Query: 132 NCCKQIHTHVSKSGLDL-----------DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
N I +V + + D+ N ++ Y S + +AR +F+++ R
Sbjct: 131 NA--MISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERN 188
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
L WT MISGY + +A +F +M EG P+ AS LSA G L++ E + V
Sbjct: 189 LVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV 248
Query: 241 FVKMRGFEMGAILGTALVHMYTKN-GALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
GFE ++GTA++++Y+++ L A F+SM ERN TW+ MI+ L+ G +
Sbjct: 249 LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRID 308
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
A+ ++ + + I G L+ C G ID R +F + EP + + +
Sbjct: 309 AAIAVYERDPVKSIACRTALITG-LAQC---GRIDDARILFEQIP-----EPIVVSWNAL 359
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ + G V EA+EL +M ++ + + W ++A +G E A +++E+
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAGYAQNGRSEEALGLLQEL 410
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 241/415 (58%), Gaps = 3/415 (0%)
Query: 21 LADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSS-SGDLSYATRLFNSIQSP 78
L +C ++ + KQ+HA+ I +S F+AS +LA CA S ++YA +F I P
Sbjct: 37 LLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 96
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
F + T+IR + ++ + A+ Y M G P+ T+ +LKAC+ ++++ KQIH
Sbjct: 97 CTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIH 156
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
HV K GL+ D+ V N L+ Y ++ + VF+++ ++ W++M S +
Sbjct: 157 GHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWS 216
Query: 199 EALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
E LMLF +M E + + S LSACA +G L LG +H F+ E+ I+ T+L
Sbjct: 217 ECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELNIIVKTSL 276
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G + A +F M +RN T++AMISG A HG E AL +F ++ KE + P+
Sbjct: 277 VDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDH 336
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+ +V +L+AC H+G + GR++FG M + +EP EHYGC+VDLLGR G + EA E I+
Sbjct: 337 VVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 396
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ + + V+W + L+ C+ H NIE+ + +E++ L +N G Y+++SNMY++A
Sbjct: 397 SIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQA 451
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 231/409 (56%), Gaps = 4/409 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ + +++HA MI + + + +RLL F L A ++ + + N W
Sbjct: 65 RALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC--LEDARKVLDEMPEKNVVSWTA 122
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + + + +A+ ++ M R+ PN+ TF VL +C L KQIH + K
Sbjct: 123 MISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWN 182
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D + V + L+ Y+ + + AR++F+ + R + T +I+GYAQ EAL +F
Sbjct: 183 YDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQ 242
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
++ EG PN VT AS+L+A + L+ G++ H V R A+L +L+ MY+K G
Sbjct: 243 RLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 302
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVL 324
L+ A+ LFD+MPER +WNAM+ G + HG E L+LFR + E+ V P+ +T + VL
Sbjct: 303 NLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 362
Query: 325 SACCHAGFIDVGRQIF-GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
S C H D G I+ G + YGI+P EHYGC+VD+LGR G++ EA E IKRM KP
Sbjct: 363 SGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 422
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ G+LL AC+ H ++++ E V +I +EP N G YV+LSN+YA A
Sbjct: 423 TAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASA 471
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 175/318 (55%), Gaps = 13/318 (4%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
H + +L AC + R+L +++H H+ K+ ++ L+ Y L +AR+V DE
Sbjct: 52 HCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 111
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ + + WT MIS Y+Q+ ++EAL +F +M+ +PN T A+VL++C ++ L LG
Sbjct: 112 MPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALG 171
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+++H + ++ +G++L+ MY K G + +A+ +F+ +PER++ + A+I+G A
Sbjct: 172 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQL 231
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G EEAL++F++L+ E + PN +T+ +L+A +D G+Q + + ++
Sbjct: 232 GLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPF 286
Query: 356 YGC----MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAE--RVV 408
Y ++D+ +CG + A+ L M + + W A+L HG EV E R++
Sbjct: 287 YAVLQNSLIDMYSKCGNLSYAQRLFDNMPERT-AISWNAMLVGYSKHGLGREVLELFRLM 345
Query: 409 KEIIALEPNNHGVYVVLS 426
++ ++P+ + VLS
Sbjct: 346 RDEKRVKPDAVTLLAVLS 363
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 119/234 (50%), Gaps = 11/234 (4%)
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
IS + R EAL+ +M+M G E ++L+AC L G++VH + +
Sbjct: 26 ISQLCSNGRLQEALL---EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY 82
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
L T L+ Y K L A+ + D MPE+N+ +W AMIS + GH+ EAL +F +
Sbjct: 83 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAE 142
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ + PN+ TF VL++C A + +G+QI G + + + + I ++D+ + G
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVK-WNYDSHIFVGSSLLDMYAKAG 201
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHG----NIEVAERVVKEIIALEPN 417
++ EA E+ + + + DVV A++A G +E+ +R+ E + PN
Sbjct: 202 QIEEAREIFECLPER-DVVSCTAIIAGYAQLGLDEEALEMFQRLQSE--GMRPN 252
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 223/379 (58%), Gaps = 15/379 (3%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT------FV 121
A R F+ I PN ++ A AS + ++ + + R A + +
Sbjct: 148 ARRAFDEIPDPN----PVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVA 203
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV--SSDLNNARQVFDEIRNR 179
A + V +H ++K G + + VVN ++ Y+ S DL AR+VFD + R
Sbjct: 204 FSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ER 262
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLM--EGFEPNSVTLASVLSACAQSGCLELGEK 237
+ W +MI+ YAQ+ + EA+ L+ +ML G + N+V L++VL ACA +G ++ G++
Sbjct: 263 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKR 322
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H V G E +GT++V MY+K G + A F + E+NI +W+AMI+G HG
Sbjct: 323 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 382
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EAL++F ++++ + PN ITF+ VL+AC HAG +D GR + +MK+ +GIE +EHYG
Sbjct: 383 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 442
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLLGR G + EA LIK M KPD +WGALL+AC+ H N+E+AE VK + L+ +
Sbjct: 443 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS 502
Query: 418 NHGVYVVLSNMYAEAESMK 436
N G YV+LSN+YAEA K
Sbjct: 503 NSGYYVLLSNIYAEARMWK 521
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 12/293 (4%)
Query: 134 CKQIHTHVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+Q+H +SGL D + + L+ Y S +AR+ FDEI + + T M SGY
Sbjct: 112 GRQLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYV 171
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG--EKVHVFVKMRGFEMG 250
++ +L LF M+ A++++ A + + G +H + GFE
Sbjct: 172 RNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERN 231
Query: 251 AILGTALVHMYTKNGA--LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
A + ++ Y K G+ L A+ +FD+M ER++ +WN+MI+ A +G + EA+ L+ K+
Sbjct: 232 AGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKM 290
Query: 309 EK--EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
I N + VL AC HAG I G++I + R+ G+E + +VD+ +C
Sbjct: 291 LNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRM-GLEENVYVGTSIVDMYSKC 349
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
G+V A +++ K +++ W A++ HG + A + E+ L PN
Sbjct: 350 GRVEMASRAFRKIKEK-NILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPN 401
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 158/452 (34%), Positives = 240/452 (53%), Gaps = 32/452 (7%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +CK++ +L++IHAQ + + + S + F + + G + A RLF+ I P+
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKI-FRSYAEFGRPADAGRLFDEIPHPDI 84
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+ +L+ + KAI ++ + +G P+ L A + +H
Sbjct: 85 ISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGL 144
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD-------------------------- 174
+ + GLD +L V N LV Y AR VFD
Sbjct: 145 IFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSA 204
Query: 175 -----EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
++ ++ WT +I+G+ Q + +AL LF +ML+EG PN +T+ VLSACA
Sbjct: 205 LSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADI 264
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
G L+LG +H + I+ AL+ MY K+G++A A ++F+ + ++ TW MI
Sbjct: 265 GALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMI 324
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
S G+ +A++LF + + I+PN +TFV VLSAC HAG I GR++F M+ VY I
Sbjct: 325 SSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHI 384
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+P++EHYGCMVDLLGR G + EAE LI M +PD+V+W +LL+AC HGN +AE K
Sbjct: 385 DPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGK 444
Query: 410 EIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
EII EP + GVYV+L NMYA + K L++
Sbjct: 445 EIIKREPGDDGVYVLLWNMYALSNRWKEALDM 476
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 154/361 (42%), Gaps = 49/361 (13%)
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC-LVRCYSV 162
+ +RR G N+ +L C +R L ++IH GL + ++C + R Y+
Sbjct: 11 LALRRGGM--NRSVCHHLLTQCKTIREL---QRIHAQALTHGLHPNQQSISCKIFRSYAE 65
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+A ++FDEI + + +T+++S + + +A+ +F + G P+
Sbjct: 66 FGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGA 125
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD------- 275
LSA G +G VH + G + ++ ALV MY + G A+ +FD
Sbjct: 126 LSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDE 185
Query: 276 ------------------------SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
MP ++ +W A+I+G +AL+LF K+ E
Sbjct: 186 VTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLE 245
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP----KIEHYGCMVDLLGRCG 367
PN IT VGVLSAC G +D+GR I G YG + I ++D+ + G
Sbjct: 246 GHRPNHITIVGVLSACADIGALDLGRAIHG-----YGSKSNATTNIIVTNALMDMYAKSG 300
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVL 425
+ A + + + K D W ++++ GN A + +++ + PN+ VL
Sbjct: 301 SIASAFSVFEEVQMK-DAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVL 359
Query: 426 S 426
S
Sbjct: 360 S 360
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 231/448 (51%), Gaps = 32/448 (7%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN 73
P+ ++ + Q +I I+ +I + S +G ++ A LF+
Sbjct: 318 PVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFD 377
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+ N W +I A + ++A+ L + R+G P+ + T + ACSN+ +L
Sbjct: 378 KMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALET 437
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF-------------------- 173
Q+H+ K G + N L+ Y ++ ARQVF
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497
Query: 174 ----DEIRNRTLNV-------WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
DE RN N+ WTT+IS YA + ++NEA+ F M E PNS L +
Sbjct: 498 NDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTIL 557
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
L C G ++G+++H G + I+ AL+ MY K G A ++ +FD M ER+I
Sbjct: 558 LGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEERDI 616
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TWN +I+G A HG EA+ +++ +E ++PN++TFVG+L+AC HAG +D G + F S
Sbjct: 617 FTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKS 676
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M + YG+ P EHY CMVDLLGR G V AE+ I M +PD V+W ALL ACK H N E
Sbjct: 677 MSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAE 736
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ +R +++ +EP+N G YV+LSN+Y+
Sbjct: 737 IGKRAAEKLFRIEPSNAGNYVMLSNIYS 764
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 176/369 (47%), Gaps = 18/369 (4%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF + N W +I N KA ++ M R G P+Q F L A
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKG 236
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV-SSDLNNARQVFDEIRNRTLNVWTT 186
+ +L+ + + K+G + D+ + ++ YS +S L+ A + F+ + R W+T
Sbjct: 237 LGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MI+ + R + A+ ++++ ++ + ++++ AQ C + + +F ++
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRT----ALITGLAQ--CGRIDDARILFEQIP- 349
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
E + AL+ Y +NG + +AK LFD MP RN +W MI+G A +G +EEAL L +
Sbjct: 350 -EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQ 408
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC--MVDLLG 364
+L + ++P+ + + AC + ++ G Q+ +V + + C ++ + G
Sbjct: 409 ELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKV---GCQFNSFACNALITMYG 465
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+C + A ++ RMV K D+V W + LAA + ++ A +++ + + +
Sbjct: 466 KCRNMEYARQVFSRMVTK-DIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVS---WTT 521
Query: 425 LSNMYAEAE 433
+ + YA AE
Sbjct: 522 IISAYAHAE 530
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 187/412 (45%), Gaps = 57/412 (13%)
Query: 31 LKQIHAQMIIS---SRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
++ H ++ +S +RI+D L G + A +F+++ + WN++I
Sbjct: 25 VRHAHGELEVSGCSARIRD------------LGRLGRVGEAREVFDAMPRRDIIAWNSMI 72
Query: 88 RAQASSLNPDKAIFLY-----MNMRR-----TGFA------PNQHTFTFVLKACSNVRSL 131
A + PD A LY NMR +G+ + F +L+ N +
Sbjct: 73 SAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLE--RNTVAW 130
Query: 132 NCCKQIHTHVSKSGLDL-----------DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
N I +V + + D+ N ++ Y S + +AR +F+++ R
Sbjct: 131 NA--MISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERN 188
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
L WT MISGY + +A +F +M EG P+ AS LSA G L++ E + V
Sbjct: 189 LVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRV 248
Query: 241 FVKMRGFEMGAILGTALVHMYTKN-GALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
GFE ++GTA++++Y+++ L A F+SM ERN TW+ MI+ L+ G +
Sbjct: 249 LALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRID 308
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
A+ ++ + + I G L+ C G ID R +F + EP + + +
Sbjct: 309 AAIAVYERDPVKSIACRTALITG-LAQC---GRIDDARILFEQIP-----EPIVVSWNAL 359
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ + G V EA+EL +M ++ + + W ++A +G E A +++E+
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAGYAQNGRSEEALGLLQEL 410
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 222/390 (56%), Gaps = 4/390 (1%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+D F + L + S GDL A +F + + + ++I A +A+ L+
Sbjct: 330 EDRFCNTLLDMY---SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M G +P+ +T T VL C+ R L+ K++H + ++ L D+ V N L+ Y+
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVL 223
+ A VF E+R + + W T+I GY+++ ANEAL LF+ +L E F P+ T+A VL
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
ACA + G ++H ++ G+ + +LV MY K GAL A LFD + +++
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+W MI+G HG +EA+ LF ++ + I ++I+FV +L AC H+G +D G + F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ IEP +EHY C+VD+L R G +++A I+ M PD +WGALL C+ H ++++
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
AE+V +++ LEP N G YV+++N+YAEAE
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAE 716
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 199/386 (51%), Gaps = 7/386 (1%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P L L AD KS+ K++ + + + D S+L ++ GDL A+
Sbjct: 93 DPRTLCSVLQLCADS-KSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEAS 149
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
R+F+ ++ WN L+ A S + +I L+ M +G + +TF+ V K+ S++R
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
S++ +Q+H + KSG V N LV Y + +++AR+VFDE+ R + W ++I+
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY + A + L +F QML+ G E + T+ SV + CA S + LG VH F
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
L+ MY+K G L AKA+F M +R++ ++ +MI+G A G A EA+ LF ++E
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGCMVDLLGRCGK 368
+E I P+ T VL+ C +D G+++ +K G + + + ++D+ +CG
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGS 447
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAA 394
+ EAE + M K D++ W ++
Sbjct: 448 MQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 198/375 (52%), Gaps = 5/375 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+H +Q+H ++ S + + + L+AF + D A ++F+ + + WN+
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD--SARKVFDEMTERDVISWNS 266
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I S+ +K + +++ M +G + T V C++ R ++ + +H+ K+
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ N L+ YS DL++A+ VF E+ +R++ +T+MI+GYA+ A EA+ LF+
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EG P+ T+ +VL+ CA+ L+ G++VH ++K + AL+ MY K G
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR-KLEKEQIVPNDITFVGVL 324
++ +A+ +F M ++I +WN +I G + + +A EAL LF LE+++ P++ T VL
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC D GR+I G + R G +VD+ +CG +L A L + K D
Sbjct: 507 PACASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-D 564
Query: 385 VVMWGALLAACKNHG 399
+V W ++A HG
Sbjct: 565 LVSWTVMIAGYGMHG 579
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 8/346 (2%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NT +R S N + A+ L + P T VL+ C++ +SL K++ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+G +D ++ + L Y+ DL A +VFDE++ W +++ A+S + ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F +M+ G E +S T + V + + + GE++H F+ GF +G +LV Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
N + A+ +FD M ER++ +WN++I+G S+G AE+ L +F ++ I + T V V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 324 LSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+ C + I +GR + +K + E + ++D+ +CG + A+ + + M +
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRF--CNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVLS 426
VV + +++A G A ++ +E+ + P+ + V VL+
Sbjct: 361 S-VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 216/368 (58%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A + F + N W+ +I A S + DKA+ L+ +M +G P++ TF V+
Sbjct: 258 GSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVI 317
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
ACS++ + KQ+H ++ K G + ++V+ LV Y+ S + +AR+ FD ++ +
Sbjct: 318 NACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIV 377
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+WT+MI GY Q+ +AL L+ +M MEG PN +T+ASVL AC+ LE G+++H
Sbjct: 378 LWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHART 437
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
GF + +G+AL MY K G L +F MP R++ +WNAMISGL+ +G +EAL
Sbjct: 438 VKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEAL 497
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+LF +++ E P+ +TFV +LSAC H G ++ G F M +G++P++EHY CMVD+
Sbjct: 498 ELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDI 557
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R GK+ EA E + + +W +L AC+N+ N E+ ++++ L Y
Sbjct: 558 LSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAY 617
Query: 423 VVLSNMYA 430
V+LS++Y+
Sbjct: 618 VLLSSIYS 625
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 197/379 (51%), Gaps = 8/379 (2%)
Query: 35 HAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
HA I +D F S L+ +C +G A ++F+++ N W T+I AS
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYC---KAGLTPEARKVFDTMPERNSVSWATMISGYASQ 187
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+A+ L+ MRR N+ FT VL A + +N KQIH K+GL + V
Sbjct: 188 KLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVG 247
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N LV Y+ L++A Q F+ ++ W+ MI+GYAQS +++AL LF M + G
Sbjct: 248 NALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIR 307
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P+ T V++AC+ G G++VH ++ GFE + TALV MY K ++ A+
Sbjct: 308 PSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKG 367
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
FD + E +I W +MI G +G E+AL L+ ++E E I+PN++T VL AC +
Sbjct: 368 FDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAAL 427
Query: 334 DVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G+QI ++K +G+E I + + +CG + + + +RM + DV+ W A++
Sbjct: 428 EQGKQIHARTVKYGFGLEVPIG--SALSTMYAKCGCLKDGTLVFRRMPAR-DVISWNAMI 484
Query: 393 AACKNHGNIEVAERVVKEI 411
+ +G + A + +E+
Sbjct: 485 SGLSQNGCGKEALELFEEM 503
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 183/383 (47%), Gaps = 11/383 (2%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAAS--RLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+S+ + K +HAQ+I SS + A S L A C L A +F IQ+ + W
Sbjct: 20 RSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQ-----RLREAKFVFERIQNKDVVSW 74
Query: 84 NTLIR--AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
N +I +Q + L+ MR APN HTF V A S + + H
Sbjct: 75 NCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVA 134
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K D+ V + L+ Y + AR+VFD + R W TMISGYA A EAL
Sbjct: 135 IKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEAL 194
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
LF M E N SVLSA + G+++H G +G ALV MY
Sbjct: 195 GLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMY 254
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G+L A F++ ++N TW+AMI+G A G +++AL LF + I P++ TFV
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GV++AC G G+Q+ + ++ G E +I +VD+ +C +++A + +
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKL-GFESQIYVMTALVDMYAKCSSIVDARKGFDYLQ- 372
Query: 382 KPDVVMWGALLAACKNHGNIEVA 404
+PD+V+W +++ +G E A
Sbjct: 373 EPDIVLWTSMIGGYVQNGENEDA 395
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 251/451 (55%), Gaps = 39/451 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M + K++HA +I S Q +L+ SSS L +A LF+++ P+ +++NT+
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSSS-SLHHARLLFDAVYHPSTYLYNTMF 59
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
R A+S P A+ L+ +M R G P+ +TF F+LKACS + L +++H K GL
Sbjct: 60 RVYAASPTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLG 119
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF------------ 195
+ V N L+ Y +S +++AR+VFD + R + WTT+++ YA S
Sbjct: 120 GHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEM 179
Query: 196 -------------------RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
R EAL LF ++ EP+ + SVL ACA G L++G
Sbjct: 180 PERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGR 239
Query: 237 KVHVFV-KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
V+ FV +G + + + TAL+ M+ K G++ A +F+ E+++ W AM+SGLA H
Sbjct: 240 WVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMH 299
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G E+ ++ F K+ I P+++TFV +LS C H+G ++ G F M+ +G+EP +EH
Sbjct: 300 GLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEH 359
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
+GC+VDLLGR G + +A +LI M ++P+ +WGALL AC+ + N+EV E + +I E
Sbjct: 360 FGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWLIKDE 419
Query: 416 PNNHGVYVVLSNMYAEA------ESMKMQLE 440
P N +Y+ L ++Y EA E +K++++
Sbjct: 420 PWNGALYMTLLSLYREAGRWDEVEKVKLKMK 450
>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 584
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 223/405 (55%), Gaps = 7/405 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLF---NSIQSPNHFMWNTLI 87
+ H + + +D F S L+A +C GD++ A ++F ++ + W ++
Sbjct: 145 RAAHGDAVRFALAEDGFVHSALIAMYC---QEGDVADAEQVFLAAAAVGARTVVSWTAMV 201
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
A + +A+ ++ M G PN+ T L L + +H V K G D
Sbjct: 202 AGYAQNCLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFD 261
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+L +VN L+ Y + A+++FD + T+ W TM++ Y Q+ A+ F +M
Sbjct: 262 ANLPLVNALIAMYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRM 321
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
L E ++VTL SVLSAC + G LE G+ VH + RG + A +G LV MY K G +
Sbjct: 322 LSEKVGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEI 381
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A A+ FD + E + +W+AMIS A+HG EEAL+LF ++ + + PN T VL AC
Sbjct: 382 AYARQAFDGLREPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVAC 441
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H+G +D G IF S+ R Y I P +E+Y CMVD+LGR G+++EA E+I+ M +PD +
Sbjct: 442 GHSGLVDEGLAIFNSIVRDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCI 501
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WGA L C+ HGN+E+AE V K++ N+ YV+++NMY EA
Sbjct: 502 WGAFLGGCRLHGNLELAEFVAKDLFQSGSNDVTFYVLMANMYFEA 546
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 208/408 (50%), Gaps = 15/408 (3%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+ L IHA+ ++ + A+RLLA A S L+YA R+F++ + +MWNTL+
Sbjct: 36 LRALLPIHARAVLLGVAANPAFATRLLAAAAPCS---LAYARRVFDAAPRRDAYMWNTLL 92
Query: 88 RAQASSLNP-----DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
RA A + P A+ LY MR G AP+ +T+ VL AC+ R+ + H
Sbjct: 93 RAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAV 152
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVF---DEIRNRTLNVWTTMISGYAQSFRANE 199
+ L D V + L+ Y D+ +A QVF + RT+ WT M++GYAQ+ +
Sbjct: 153 RFALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQ 212
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
A+ +F M+ +G PN +TL S L CL GE VH FV GF+ L AL+
Sbjct: 213 AVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIA 272
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G++A AK LFD M + +WN M++ +G A+ F ++ E++ + +T
Sbjct: 273 MYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVT 332
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
V VLSAC G ++ G+ + + R G++ +VD+ +CG++ A + +
Sbjct: 333 LVSVLSACTRQGALETGKWVH-ELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGL 391
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVL 425
+P VV W A+++A NHG E A + + ++PN+ + VL
Sbjct: 392 -REPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVL 438
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 221/399 (55%), Gaps = 34/399 (8%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACS 126
A +F I + W TLI + A+ Y+ M G + ++KAC+
Sbjct: 229 AAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACA 288
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS------------SD--------- 165
++ +Q+HT + K+G D V LV Y SD
Sbjct: 289 RYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNA 348
Query: 166 ----------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
+ AR++FD++ R W+TMISGY Q+ R++ AL LF ML EPN
Sbjct: 349 LLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPN 408
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
VTLAS LSA A SG L+ G+ +H ++ R ++ L + L+ MY K G++A A F+
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFN 468
Query: 276 SMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
+ ++ +++ WNAMI LA HG+A +LDLF +L++ I PN ITF+GVLSACCHAG +
Sbjct: 469 RVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTV 528
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
G+ F SM R YGI+P I+HYGCMVDLLGR G + EAE+L+ M KPDVV+WG++L+
Sbjct: 529 TKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILS 588
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
A + GN+ + ER +E+ L+ + + LSN+YA+A
Sbjct: 589 ASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADA 627
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 181/447 (40%), Gaps = 71/447 (15%)
Query: 49 AASRLLAFCALSSSGDLSYATRLFNSIQS--PNHFMWNTLIRAQASSLNPDKAIFLYMNM 106
A +R AL+ +G L A L + + + TL+ + A + + +A+ ++ +M
Sbjct: 76 ATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSM 135
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
PN+ T + A + + IH + LD + V LV Y+ +L
Sbjct: 136 LSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLEL 195
Query: 167 NNARQVFDEIRNR---TLNV----------------------------WTTMISGYAQSF 195
+AR +FD + R T NV W T+I GY +
Sbjct: 196 CSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICAD 255
Query: 196 RANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
++A+ + QM+ E G V L ++ ACA+ + G+++H + GF+ A +
Sbjct: 256 LISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQ 315
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNA--------------------------- 287
LVH Y G + A+ F + + A+WNA
Sbjct: 316 ATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTV 375
Query: 288 ----MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS- 342
MISG G ++ AL LF + I PN++T LSA +G +D G+ I
Sbjct: 376 SWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYI 435
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-PDVVMWGALLAACKNHGNI 401
M R + + ++D+ +CG + +A + R+ K V W A++ + HG
Sbjct: 436 MNRPVQLTDNLS--SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYA 493
Query: 402 EVAERVVKEI--IALEPNNHGVYVVLS 426
++ + ++ +++PN+ VLS
Sbjct: 494 HMSLDLFSQLQRTSIKPNSITFIGVLS 520
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 148/361 (40%), Gaps = 71/361 (19%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHVVNCLVRCYS-VSSDLNNARQVFDEI- 176
F++ + L C +Q+H +KSGL ++ V N ++ YS + S L +A Q+FDE
Sbjct: 11 FLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETP 70
Query: 177 --------RNRTLNV--------------------------WTTMISGYAQSFRANEALM 202
RN L +TT+++ +A++ A A+
Sbjct: 71 PPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVA 130
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
+F ML E PN TLA ++A A+ G +H F R + I+ T LVH Y
Sbjct: 131 VFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYA 190
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIV------- 314
L A+ALFD M RN TWN M++G + A ++F ++ E++++
Sbjct: 191 GVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDG 250
Query: 315 ----------------------PND--ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
ND + V ++ AC + G+Q+ + + G +
Sbjct: 251 YICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILK-NGFD 309
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
+V G CG ++ ++ R+ K W ALLAA +G I A + +
Sbjct: 310 AHAFVQATLVHFYGCCG-LIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDD 368
Query: 411 I 411
+
Sbjct: 369 M 369
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 36 AQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLN 95
AQM + H A+ L AL +G + A LF+ + + W+T+I +
Sbjct: 331 AQMTFRLSDKSHTASWNAL-LAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGR 389
Query: 96 PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC 155
D A+ L+ +M T PN+ T L A ++ +L+ K IH ++ + L ++ +
Sbjct: 390 SDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSG 449
Query: 156 LVRCYSVSSDLNNARQVFDEIRNR--TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
L+ Y+ + +A Q F+ + ++ +++ W MI A A+ +L LF Q+ +
Sbjct: 450 LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIK 509
Query: 214 PNSVTLASVLSACAQSGCLELGE-KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PNS+T VLSAC +G + G+ + G + +V + + G L +A+
Sbjct: 510 PNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQ 569
Query: 273 LFDSMPER-NIATWNAMISGLASHGH---AEEALDLFRKLEK 310
L MP + ++ W +++S + G+ E A + KL++
Sbjct: 570 LVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQ 611
>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Brachypodium distachyon]
Length = 580
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 204/356 (57%), Gaps = 1/356 (0%)
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
F++++L RA P A+ Y + + FT V KAC+++ +L +H H
Sbjct: 71 FLFSSLARAATHQGLPLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRTGMTVHAH 130
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
G D V+ LV YS L AR++FD IR++ + W MISGY Q+ A +
Sbjct: 131 SILLGFGSDRFVLTALVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAEQG 190
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ ++ +M + P+S+T + LSACAQ+G L+LG +V + ++ LG+ALV+M
Sbjct: 191 IEVYKEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSALVNM 250
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y + G + KA+ FD + ERN+ TW +MI+G HGH EA+ L+ + + PND+TF
Sbjct: 251 YARCGVVDKARQWFDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDVTF 310
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK-RM 379
V VLSAC HAG I GR F MKRVYG+ P++EHY MVD+ GR G++ EA + I+ M
Sbjct: 311 VAVLSACAHAGLITEGRDAFACMKRVYGLAPRVEHYCSMVDMYGRAGRLEEAMQFIRDSM 370
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
P +W A+L ACK H N + V + +I LEP N +V+LSN+YA + M
Sbjct: 371 PGDPGPEVWTAILGACKMHKNFSLGVEVAERLIRLEPENPSYHVLLSNIYALSGKM 426
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 255/473 (53%), Gaps = 49/473 (10%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
++CS P L + +C + L+Q+HA ++ R L+ F A S
Sbjct: 1 MRCS----PQLSHRDFVAVLSRCSTRAHLEQLHAHAFVAGRAAAQTTTFHLIRFAAFRLS 56
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIF-----------LYMNMRRTGF 111
L+YA LF++ P+ F+++ ++ A S+ + L++ M R G
Sbjct: 57 C-LTYARHLFDATPHPSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGR 115
Query: 112 -APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNAR 170
APNQ + VL+A S V + K IH+H KSG + ++ YS + +AR
Sbjct: 116 PAPNQFVYPLVLRAASGV-GVGIVKSIHSHACKSGFCGHDIIRTSVLDGYSRHGMMADAR 174
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------------------- 207
++FD + R + WT ++SGYA++ + +A++LF++M
Sbjct: 175 KLFDGLTERNVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVE 234
Query: 208 --------LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
+ GF PN+ T++ VLSAC G L++G+ +H + G+ + L+
Sbjct: 235 AVGIFGRMVGAGFRPNATTVSCVLSACGHLGMLKIGKLIHCYAWRTCVGFGSSVLNGLID 294
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G L A+ +FD + +R++ TWN++I+ LA HGH++ A+ +F ++ E + P+ +T
Sbjct: 295 MYGKCGNLEGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVT 354
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
FVG+L+AC H GF+D G + F M+ +GIEP+IEHYGC++DLLGR G+ +A +I M
Sbjct: 355 FVGLLNACTHGGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDM 414
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ D VMWG+LL AC+ H +E AE +++++ L+PNN V+L+N+Y+E
Sbjct: 415 RIEADEVMWGSLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLANVYSEG 467
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+L A +F+ + + WN+LI A + AI ++ MR G P+ TF +L
Sbjct: 300 GNLEGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGLL 359
Query: 123 KACSN-------VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
AC++ +R + H G++ ++ C++ + +A V +
Sbjct: 360 NACTHGGFVDEGIRYFELMQHEH------GIEPEIEHYGCIIDLLGRAGRFQDALNVISD 413
Query: 176 IRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLMEGFEPNS----VTLASVLSACAQSG 230
+R V W ++++ + R E L + L+E +PN+ V LA+V S + G
Sbjct: 414 MRIEADEVMWGSLLNA-CRVHRQVEFAELAIRKLLE-LDPNNANYVVMLANVYS---EGG 468
Query: 231 CLELGEKVHVFVK 243
E KV FVK
Sbjct: 469 LWEEVRKVRKFVK 481
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 241/427 (56%), Gaps = 5/427 (1%)
Query: 9 RQPPLPIPPLS-LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
+Q PL LS LL QLK+IHA ++ + + + ++LL L GD+ Y
Sbjct: 4 KQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLE--NLVVIGDMCY 61
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++F+ + P F+WNTL + + P +++ LY MR G P++ T+ FV+KA S
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ +C +H HV K G V LV Y +L++A +F+ ++ + L W
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
++ Q+ + AL F++M + + +S T+ S+LSAC Q G LE+GE+++ +
Sbjct: 182 LAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEI 241
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ I+ A + M+ K G A+ LF+ M +RN+ +W+ MI G A +G + EAL LF
Sbjct: 242 DCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTT 301
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV--YGIEPKIEHYGCMVDLLGR 365
++ E + PN +TF+GVLSAC HAG ++ G++ F M + +EP+ EHY CMVDLLGR
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR 361
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G + EA E IK+M +PD +WGALL AC H ++ + ++V ++ P+ +V+L
Sbjct: 362 SGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLL 421
Query: 426 SNMYAEA 432
SN+YA A
Sbjct: 422 SNIYAAA 428
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 226/401 (56%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H + S + + A+ +L + L+ A+ LF+ ++ + WN +I A
Sbjct: 403 RQVHGLAVKSISMSNICVANAILDMYGKCKA--LAEASDLFDMMERRDAVSWNAIIAACE 460
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ N ++ + + +M + P+ T+ VLKAC+ ++LN +IHT + KSG+ D
Sbjct: 461 QNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSF 520
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V LV Y + A ++ D +T+ W +ISG++ ++ +A F +ML G
Sbjct: 521 VGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMG 580
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P++ T A+VL CA + LG+++H + + + + + LV MY+K G + ++
Sbjct: 581 VNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQ 640
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ P R+ TWNAM+ G A HG EEAL LF ++ + PN TFV VL AC H G
Sbjct: 641 LMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMG 700
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G F M YG++P+ EHY CMVD+LGR G++ EA L+++M ++ D V+W L
Sbjct: 701 LVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNL 760
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L+ CK HGN+EVAE+ + ++ L+P + V+LSN+YA+A
Sbjct: 761 LSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADA 801
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 199/425 (46%), Gaps = 34/425 (8%)
Query: 10 QPPLPIPPLSLLADKCKSMHQL---KQIHAQMII-------------------------S 41
QPP I S + +C + L KQ HA+MI +
Sbjct: 44 QPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYA 103
Query: 42 SRIQDHFAASRLLAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD 97
++ D ++++ ++ +S G++ A + F + + WN++I +
Sbjct: 104 CKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECR 163
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
K+I +++ M R G ++ + VLKAC + + Q+H V K G D D+ + L+
Sbjct: 164 KSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALL 223
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
Y+ L+++ VF E+ + W+ MI+G Q+ R E L LF +M G +
Sbjct: 224 GMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQS 283
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
AS+ +CA L LG+++H F I+GTA + MY K G +A A+ + SM
Sbjct: 284 IYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSM 343
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
P+ ++ ++NA+I G A +AL F+ L K + ++IT G L+AC GR
Sbjct: 344 PKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGR 403
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
Q+ G + + I ++D+ G+C + EA +L M+ + D V W A++AAC+
Sbjct: 404 QVHGLAVKSISM-SNICVANAILDMYGKCKALAEASDLFD-MMERRDAVSWNAIIAACEQ 461
Query: 398 HGNIE 402
+GN E
Sbjct: 462 NGNEE 466
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 192/396 (48%), Gaps = 11/396 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K++H+ + S+ D + L A G ++ A ++ +S+ + +N +I A
Sbjct: 302 KELHSHALKSAFGSDIIVGTATLDMYA--KCGRMADAQKVLSSMPKCSLQSYNAIIVGYA 359
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S +A+ + + +TG ++ T + L AC+++R +Q+H KS ++
Sbjct: 360 RSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNIC 419
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N ++ Y L A +FD + R W +I+ Q+ E L F M+
Sbjct: 420 VANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSR 479
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ T SVL ACA L G ++H + G + +G ALV MY K G + KA
Sbjct: 480 MEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKAD 539
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+ D ++ + +WNA+ISG + +E+A F ++ + + P++ T+ VL C +
Sbjct: 540 KIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLA 599
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGC--MVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ +G+QI ++ E + + Y C +VD+ +CG + +++ + ++ + D V W
Sbjct: 600 TVGLGKQIHA---QIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNR-DFVTWN 655
Query: 390 ALLAACKNHGNIEVAERVVK--EIIALEPNNHGVYV 423
A+L +HG E A ++ + +++ ++P NH +V
Sbjct: 656 AMLCGYAHHGLGEEALKLFESMQLVNVKP-NHATFV 690
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 34/220 (15%)
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T + + C++ L G++ H + GFE + L+ MY K L A +FD M
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG--------------- 322
R++ ++N++ISG AS G + A F ++ + +V + G
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 323 ----------------VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
VL AC D+G Q+ G + + +G + + ++ + +C
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVK-FGFDCDVVTGSALLGMYAKC 229
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAAC-KNHGNIEVAE 405
++ ++ + + K + V W A++A C +N N+E E
Sbjct: 230 KRLDDSLSVFSELPEK-NWVSWSAMIAGCVQNDRNVEGLE 268
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 236/428 (55%), Gaps = 10/428 (2%)
Query: 18 LSLLADKCKSMH---QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
L L C H + QIHA I + + F + L+ F A+S G + ++F+
Sbjct: 141 LPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVS--GFIEAVEKVFDQ 198
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ W TLI+A + P +AI + M T ++ T VL ACS +
Sbjct: 199 GPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTA---DRMTLVVVLSACSQLGDFTLG 255
Query: 135 KQIHTHVSKSGLDL--DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
K+I ++ D+ D+ + N L+ Y + ARQ+F + + L W +MISG A
Sbjct: 256 KKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLA 315
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
EAL +F +M G +P+SVTL VL++CA G LELG+ VH ++ +
Sbjct: 316 HQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGY 375
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+ ALV MY K G++ +A +F +M +++ ++ AMI G A HG A+ AL +F ++ +
Sbjct: 376 VANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMG 435
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ P+ +T VGVLSAC HAG ++ GR+ F M R+Y ++P+ EHYGCMVDLLGR G + EA
Sbjct: 436 VRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEA 495
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
E +M PD +WG+LL ACK H +E+ E V++++I +EP G Y+++SN+Y+ A
Sbjct: 496 EAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSA 555
Query: 433 ESMKMQLE 440
+ L+
Sbjct: 556 NRWRDALK 563
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 227/429 (52%), Gaps = 27/429 (6%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS------------GD 64
P LL CKS+ ++KQIHA II + +++ C +S +
Sbjct: 28 PQLLLLSSCKSVREIKQIHAS-IIKANTTRSTTTLPIISLCTKITSLLQQDVHLADSIQN 86
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIF-LYMNMRRTGFAPNQHTFTFVLK 123
L YA+ L N +++N +I++ ++S N IF LY M G +P+ +T ++LK
Sbjct: 87 LWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLK 146
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
ACS + QIH H K+GL +L V N L+R Y+VS + +VFD+ + L
Sbjct: 147 ACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLIS 206
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
WTT+I Y++ +EA+ F +M + +TL VLSAC+Q G LG+K+ ++
Sbjct: 207 WTTLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGKKILAYMD 263
Query: 244 MRGFEMGA--ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
F++ + LG AL+ MY K G A+ LF MP +N+ +WN+MISGLA G +EA
Sbjct: 264 HHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEA 323
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY--GCM 359
L +FR+++ + P+ +T VGVL++C + G +++G+ + + + + K + Y +
Sbjct: 324 LHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNH---MKADGYVANAL 380
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPN 417
VD+ +CG + +A + + M K DV + A++ HG + A + E+ + + P+
Sbjct: 381 VDMYAKCGSIDQAFMVFQAMKCK-DVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPD 439
Query: 418 NHGVYVVLS 426
+ + VLS
Sbjct: 440 HVTLVGVLS 448
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 222/390 (56%), Gaps = 4/390 (1%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+D F + L + S GDL A +F + + + ++I A +A+ L+
Sbjct: 179 EDRFCNTLLDMY---SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 235
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M G +P+ +T T VL C+ R L+ K++H + ++ L D+ V N L+ Y+
Sbjct: 236 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 295
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVL 223
+ A VF E+R + + W T+I GY+++ ANEAL LF+ +L E F P+ T+A VL
Sbjct: 296 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 355
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
ACA + G ++H ++ G+ + +LV MY K GAL A LFD + +++
Sbjct: 356 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 415
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+W MI+G HG +EA+ LF ++ + I ++I+FV +L AC H+G +D G + F M
Sbjct: 416 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 475
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ IEP +EHY C+VD+L R G +++A I+ M PD +WGALL C+ H ++++
Sbjct: 476 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 535
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
AE+V +++ LEP N G YV+++N+YAEAE
Sbjct: 536 AEKVAEKVFELEPENTGYYVLMANIYAEAE 565
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 198/375 (52%), Gaps = 5/375 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+H +Q+H ++ S + + + L+AF + D A ++F+ + + WN+
Sbjct: 58 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD--SARKVFDEMTERDVISWNS 115
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I S+ +K + +++ M +G + T V C++ R ++ + +H+ K+
Sbjct: 116 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 175
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ N L+ YS DL++A+ VF E+ +R++ +T+MI+GYA+ A EA+ LF+
Sbjct: 176 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 235
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EG P+ T+ +VL+ CA+ L+ G++VH ++K + AL+ MY K G
Sbjct: 236 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 295
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR-KLEKEQIVPNDITFVGVL 324
++ +A+ +F M ++I +WN +I G + + +A EAL LF LE+++ P++ T VL
Sbjct: 296 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 355
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC D GR+I G + R G +VD+ +CG +L A L + K D
Sbjct: 356 PACASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-D 413
Query: 385 VVMWGALLAACKNHG 399
+V W ++A HG
Sbjct: 414 LVSWTVMIAGYGMHG 428
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 172/324 (53%), Gaps = 4/324 (1%)
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F+ ++ WN L+ A S + +I L+ M +G + +TF+ V K+ S++RS+
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ +Q+H + KSG V N LV Y + +++AR+VFDE+ R + W ++I+GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
+ A + L +F QML+ G E + T+ SV + CA S + LG VH F
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
L+ MY+K G L AKA+F M +R++ ++ +MI+G A G A EA+ LF ++E+E
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGCMVDLLGRCGKVL 370
I P+ T VL+ C +D G+++ +K G + + + ++D+ +CG +
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQ 298
Query: 371 EAEELIKRMVWKPDVVMWGALLAA 394
EAE + M K D++ W ++
Sbjct: 299 EAELVFSEMRVK-DIISWNTIIGG 321
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 221/399 (55%), Gaps = 34/399 (8%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACS 126
A +F I + W TLI + A+ Y+ M G + ++KAC+
Sbjct: 229 AAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACA 288
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS------------SD--------- 165
++ +Q+HT + K+G D V LV Y SD
Sbjct: 289 RYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNA 348
Query: 166 ----------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
+ AR++FD++ R W+TMISGY Q+ R++ AL LF ML EPN
Sbjct: 349 LLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPN 408
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
VTLAS LSA A SG L+ G+ +H ++ R ++ L + L+ MY K G++A A F+
Sbjct: 409 EVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQFFN 468
Query: 276 SMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
+ ++ +++ WNAMI LA HG+A +LDLF +L++ I PN ITF+GVLSACCHAG +
Sbjct: 469 RVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHAGTV 528
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
G+ F SM R YGI+P I+HYGCMVDLLGR G + EAE+L+ M KPDVV+WG++L+
Sbjct: 529 TKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGSILS 588
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
A + GN+ + ER +E+ L+ + + LSN+YA+A
Sbjct: 589 ASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADA 627
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 181/447 (40%), Gaps = 71/447 (15%)
Query: 49 AASRLLAFCALSSSGDLSYATRLFNSIQS--PNHFMWNTLIRAQASSLNPDKAIFLYMNM 106
A +R AL+ +G L A L + + + TL+ + A + + +A+ ++ +M
Sbjct: 76 ATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSM 135
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
PN+ T + A + + IH + LD + V LV Y+ +L
Sbjct: 136 LSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLEL 195
Query: 167 NNARQVFDEIRNR---TLNV----------------------------WTTMISGYAQSF 195
+AR +FD + R T NV W T+I GY +
Sbjct: 196 CSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICAD 255
Query: 196 RANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
++A+ + QM+ E G V L ++ ACA+ + G+++H + GF+ A +
Sbjct: 256 LISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQ 315
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNA--------------------------- 287
LVH Y G + A+ F + + A+WNA
Sbjct: 316 ATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTV 375
Query: 288 ----MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS- 342
MISG G ++ AL LF + I PN++T LSA +G +D G+ I
Sbjct: 376 SWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYI 435
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-PDVVMWGALLAACKNHGNI 401
M R + + ++D+ +CG + +A + R+ K V W A++ + HG
Sbjct: 436 MNRPVQLTDNLS--SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYA 493
Query: 402 EVAERVVKEI--IALEPNNHGVYVVLS 426
++ + ++ +++PN+ VLS
Sbjct: 494 HMSLDLFSQLQRTSIKPNSITFIGVLS 520
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 148/361 (40%), Gaps = 71/361 (19%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHVVNCLVRCYS-VSSDLNNARQVFDEI- 176
F++ + L C +Q+H +KSGL ++ V N ++ YS + S L +A Q+FDE
Sbjct: 11 FLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETP 70
Query: 177 --------RNRTLNV--------------------------WTTMISGYAQSFRANEALM 202
RN L +TT+++ +A++ A A+
Sbjct: 71 PPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVA 130
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
+F ML E PN TLA ++A A+ G +H F R + I+ T LVH Y
Sbjct: 131 VFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYA 190
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIV------- 314
L A+ALFD M RN TWN M++G + A ++F ++ E++++
Sbjct: 191 GVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDG 250
Query: 315 ----------------------PND--ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
ND + V ++ AC + G+Q+ + + G +
Sbjct: 251 YICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILK-NGFD 309
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
+V G CG ++ ++ R+ K W ALLAA +G I A + +
Sbjct: 310 AHAFVQATLVHFYGCCG-LIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDD 368
Query: 411 I 411
+
Sbjct: 369 M 369
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 36 AQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLN 95
AQM + H A+ L AL +G + A LF+ + + W+T+I +
Sbjct: 331 AQMTFRLSDKSHTASWNAL-LAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGR 389
Query: 96 PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC 155
D A+ L+ +M T PN+ T L A ++ +L+ K IH ++ + L ++ +
Sbjct: 390 SDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSG 449
Query: 156 LVRCYSVSSDLNNARQVFDEIRNR--TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
L+ Y+ + +A Q F+ + ++ +++ W MI A A+ +L LF Q+ +
Sbjct: 450 LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIK 509
Query: 214 PNSVTLASVLSACAQSGCLELGE-KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PNS+T VLSAC +G + G+ + G + +V + + G L +A+
Sbjct: 510 PNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQ 569
Query: 273 LFDSMPER-NIATWNAMISGLASHGH---AEEALDLFRKLEK 310
L MP + ++ W +++S + G+ E A + KL++
Sbjct: 570 LVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQ 611
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 211/368 (57%), Gaps = 2/368 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A ++F+S + W+T+I ++ +K I M G P+ ++ V+
Sbjct: 360 GHLGTANKIFHSFHKSSE-DWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVI 418
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+CS V ++N + IH + K+ + ++ V N L+ Y S + ++F R +
Sbjct: 419 SSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVI 478
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W T+IS Y QS EA++LFD+M+ E PN VT VLSACA L+ GEK+H ++
Sbjct: 479 SWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYI 538
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
K GFE + TAL+ MY K G L ++ LF+S ER++ WN MIS HGH E A+
Sbjct: 539 KENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAM 598
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
++F+ +E+ I PN TF+ +LSAC H G + GR +F M++ YGIEP ++HY ++DL
Sbjct: 599 EIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQK-YGIEPSLKHYASIIDL 657
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G + AE L+ M PD +WG+LL+ACK H EV R+ + I +P N G Y
Sbjct: 658 LGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYY 717
Query: 423 VVLSNMYA 430
++LS++Y+
Sbjct: 718 IILSDLYS 725
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 181/402 (45%), Gaps = 18/402 (4%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
H+ +I + + F A++L+AF A +++T LF I S + F+WN++I++ S+
Sbjct: 29 FHSLIITTGNSNNVFFATKLMAFYAYHRKP--AFSTHLFRLIHSKDIFLWNSIIQSHFSN 86
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+ +A Y+ MR + PNQ T V+ C+ + N IH SK GL + +
Sbjct: 87 GDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAI 146
Query: 154 -NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ + YS + +A +F EI + + WT +I GY Q+ + L +M G
Sbjct: 147 GSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGG 206
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN T+ S AC L G+ +H GF ++ + ++ MY++ G+ +A
Sbjct: 207 TPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYR 266
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
F + ++++ +W ++I+ + G E L LF +++ +I+P++I +L ++
Sbjct: 267 CFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDR 326
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYG-----CMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
I G+ + + I H C LG K+ + +
Sbjct: 327 IFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHS--------FHKSSED 378
Query: 388 WGALLAACKNHGNIEVAERVVKEIIAL--EPNNHGVYVVLSN 427
W ++ N G E ++E++ L EP+ + + V+S+
Sbjct: 379 WSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISS 420
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 151/315 (47%), Gaps = 16/315 (5%)
Query: 4 KCSSLRQPPLPI---PPLSLLADKCKSMHQL------KQIHAQMIISSRIQDHFAASRLL 54
KC S + L + P L+ L S Q+ + IH I +S I++ A+ L+
Sbjct: 394 KCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLM 453
Query: 55 AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
SG ++ R+F+ + WNTLI + S +AI L+ M + PN
Sbjct: 454 DM--YGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPN 511
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T VL AC+++ SL+ ++IH ++ ++G + ++ + L+ Y+ +L +R++F+
Sbjct: 512 KVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFN 571
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
R + +W MIS Y A+ +F M +PN+ T S+LSAC +G +
Sbjct: 572 STEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTG--HV 629
Query: 235 GEKVHVFVKMR--GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT-WNAMISG 291
E H+F +M+ G E +++ + ++G+L A+AL SMP T W +++S
Sbjct: 630 LEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSA 689
Query: 292 LASHGHAEEALDLFR 306
H E + L R
Sbjct: 690 CKIHNEFEVGVRLAR 704
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 239/433 (55%), Gaps = 32/433 (7%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
Q + + + + +R+ + AA+ G + A ++F+ ++ + F W +I
Sbjct: 181 QAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISC 240
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ +A+ L+ +MR G+ ++ V+ AC+ + + H ++GL
Sbjct: 241 FQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSR 300
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDE----------------IRNRTL------------ 181
L+V N L+ YS ++ AR++FD ++N ++
Sbjct: 301 LNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPD 360
Query: 182 --NV-WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
NV WTTMISG Q+ +++EAL +F+ M +G +P+ VTL SV+SAC LE G+ +
Sbjct: 361 KDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSM 420
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H +++ + + ILGT+L+ MY K G L A +FD+M ER WNA+I GLA +G
Sbjct: 421 HEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLV 480
Query: 299 EEALDLFRKLEKEQI-VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
++LD+F ++E PN+ITF GVLSAC HAG ++ G+ F M+ Y I P I HYG
Sbjct: 481 MKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYG 540
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLLGR G V EAE LI+ M PDV WGALL +C HG+ EV ERV ++++ L+P+
Sbjct: 541 CMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPH 600
Query: 418 NHGVYVVLSNMYA 430
+ G + +LSN+YA
Sbjct: 601 HDGFHTMLSNIYA 613
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 175/400 (43%), Gaps = 50/400 (12%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY--ATRLFNSIQSPNHF 81
+C S L QIHAQ + S + D FAASRL+ F + L + + RL + + PN F
Sbjct: 13 RCSSARHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSLRLLHVVHRPNAF 72
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
N +++A P + LY +M AP+ +T T + AC+ R++ +Q+H H
Sbjct: 73 SCNMVLKAAREHGLPHLCLPLYASMSA---APDCYTHTILAAACATRRAIEEGRQVHCHA 129
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+ G +L++ N L+ YS L +AR+VFD W T+++ Y Q+ ++A+
Sbjct: 130 VRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAV 189
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
+F +M P E GA +++V ++
Sbjct: 190 GVFARM------P---------------------------------ERGAAAVSSMVSLF 210
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+ G + +A+ +FD + +++ TW AMIS +G EAL LF + E ++ V
Sbjct: 211 GRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMV 270
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
V++AC G G R G+ ++ ++ + V+ A L
Sbjct: 271 CVVAACARLEVTRNGEMCHGLAFRA-GLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQC 329
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
D W +++A +G+++ A KE+ + P+ V
Sbjct: 330 L-DQFSWNSMIAGYLKNGSVKDA----KELFTVMPDKDNV 364
>gi|242087927|ref|XP_002439796.1| hypothetical protein SORBIDRAFT_09g020210 [Sorghum bicolor]
gi|241945081|gb|EES18226.1| hypothetical protein SORBIDRAFT_09g020210 [Sorghum bicolor]
Length = 399
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 206/350 (58%), Gaps = 1/350 (0%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
+N+L+ + A S P +A+ + +M G P+Q T VL++C+ H V
Sbjct: 12 FNSLLASLARSGRPAQALCTFRDMLARGVRPDQFTLPPVLRSCTLTGDAGLASTSHALVV 71
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G +L V + LV CY+ S+L +AR++FD +R R +WT+M+S YAQ + AL
Sbjct: 72 KLGAQENLFVASALVLCYAGLSNLPDARRLFDGMRERDAVLWTSMLSAYAQGGEPDAALR 131
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
F M+ G E ++V + S+L AC Q G G VH R M LG ALV MY
Sbjct: 132 FFGSMVAAGMELDAVVMVSLLLACGQLGWRRHGRSVHACCVRRFLGMPLSLGNALVDMYV 191
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G A A+ +F MP R++ +W+A+I G +GH++ AL F ++E E I PN +TF+G
Sbjct: 192 KCGDFAFAERVFAGMPRRDVISWSALILGHGLNGHSDVALRFFDRMEAEGIRPNSVTFLG 251
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
LSAC H+G +D I MK ++GIEP+++HY CM D LGR G V+EA +LI+ M ++
Sbjct: 252 ALSACAHSGMVDKAYAILKGMK-LWGIEPELKHYSCMADTLGRAGHVVEAVKLIEEMPFE 310
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
PD + G +LAAC+ HG +E AE V K ++ + P G Y+ L+N+Y++A
Sbjct: 311 PDEAILGGVLAACRVHGEMESAEWVSKRLMDMSPGKSGYYMSLANIYSDA 360
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 147/343 (42%), Gaps = 42/343 (12%)
Query: 35 HAQMIISSRIQDHFAASRL-LAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
HA ++ ++ F AS L L + LS +L A RLF+ ++ + +W +++ A A
Sbjct: 67 HALVVKLGAQENLFVASALVLCYAGLS---NLPDARRLFDGMRERDAVLWTSMLSAYAQG 123
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
PD A+ + +M G + +L AC + + +H + L + L +
Sbjct: 124 GEPDAALRFFGSMVAAGMELDAVVMVSLLLACGQLGWRRHGRSVHACCVRRFLGMPLSLG 183
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N LV Y D A +VF + R + W+ +I G+ + ++ AL FD+M EG
Sbjct: 184 NALVDMYVKCGDFAFAERVFAGMPRRDVISWSALILGHGLNGHSDVALRFFDRMEAEGIR 243
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PNSVT LSACA SG M K A+ K L
Sbjct: 244 PNSVTFLGALSACAHSG-----------------------------MVDKAYAILKGMKL 274
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
+ PE + ++ M L GH EA+ L ++ E P++ GVL+AC G +
Sbjct: 275 WGIEPE--LKHYSCMADTLGRAGHVVEAVKLIEEMPFE---PDEAILGGVLAACRVHGEM 329
Query: 334 DVGRQIFGSMKRVYGIEP-KIEHYGCMVDLLGRCGKVLEAEEL 375
+ + KR+ + P K +Y + ++ G+ +AE +
Sbjct: 330 ESAEWV---SKRLMDMSPGKSGYYMSLANIYSDAGRYSDAERI 369
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 6/242 (2%)
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
TL + ++++ A+S R +AL F ML G P+ TL VL +C +G L H
Sbjct: 8 TLASFNSLLASLARSGRPAQALCTFRDMLARGVRPDQFTLPPVLRSCTLTGDAGLASTSH 67
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V G + + +ALV Y L A+ LFD M ER+ W +M+S A G +
Sbjct: 68 ALVVKLGAQENLFVASALVLCYAGLSNLPDARRLFDGMRERDAVLWTSMLSAYAQGGEPD 127
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGC 358
AL F + + + + V +L AC G+ GR + ++R G+ + +
Sbjct: 128 AALRFFGSMVAAGMELDAVVMVSLLLACGQLGWRRHGRSVHACCVRRFLGMPLSLGN--A 185
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEP 416
+VD+ +CG AE + M + DV+ W AL+ +G+ +VA R + A + P
Sbjct: 186 LVDMYVKCGDFAFAERVFAGMP-RRDVISWSALILGHGLNGHSDVALRFFDRMEAEGIRP 244
Query: 417 NN 418
N+
Sbjct: 245 NS 246
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 252/450 (56%), Gaps = 20/450 (4%)
Query: 3 LKCSSLRQ----PPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLA 55
L SS+R+ P P ++ A C S+ + KQ H Q + D F +S L+
Sbjct: 62 LAFSSMRKLSLYPTRSSFPCAIKA--CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIV 119
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
S+ G L A ++F+ I N W ++IR + N A+ L+ ++ +
Sbjct: 120 M--YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDD 177
Query: 116 HTF------TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD--LN 167
F V+ ACS V + + IH+ V K G D + V N L+ Y+ + +
Sbjct: 178 AMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP-NSVTLASVLSAC 226
AR++FD+I ++ + +++S YAQS +NEA +F +++ N++TL++VL A
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+ SG L +G+ +H V G E I+GT+++ MY K G + A+ FD M +N+ +W
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWT 357
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
AMI+G HGHA +AL+LF + + PN ITFV VL+AC HAG G + F +MK
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
+G+EP +EHYGCMVDLLGR G + +A +LI+RM KPD ++W +LLAAC+ H N+E+AE
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
V + L+ +N G Y++LS++YA+A K
Sbjct: 478 SVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 201/384 (52%), Gaps = 18/384 (4%)
Query: 69 TRLFNS-IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
T LFN + + F WN++I A S + +A+ + +MR+ P + +F +KACS+
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + KQ H G D+ V + L+ YS L +AR+VFDEI R + WT+M
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEP------NSVTLASVLSACAQSGCLELGEKVHVF 241
I GY + A +A+ LF +L++ + +S+ L SV+SAC++ L E +H F
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 242 VKMRGFEMGAILGTALVHMYTK--NGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V RGF+ G +G L+ Y K G +A A+ +FD + +++ ++N+++S A G +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 300 EALDLFRKLEKEQIVP-NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EA ++FR+L K ++V N IT VL A H+G + +G+ I + R+ G+E +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTS 327
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEP 416
++D+ +CG+V A + RM K +V W A++A HG+ A + +I + P
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 417 NNHGVYVVLSNMYAEAESMKMQLE 440
N Y+ ++ A + +E
Sbjct: 387 N----YITFVSVLAACSHAGLHVE 406
>gi|15223858|ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g77170
gi|332197823|gb|AEE35944.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 467
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 232/425 (54%), Gaps = 38/425 (8%)
Query: 14 PIPP------LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
P+ P L+ L C S+ ++++IH I SRI D
Sbjct: 40 PLSPQDRNKLLATLLSNCTSLARVRRIHGD-IFRSRILD--------------------- 77
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
Q P F+WN ++R+ +P AI +Y+ M R+ P++++ V+KA
Sbjct: 78 --------QYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQ 129
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ K++H+ + G D + + Y + + NAR+VFDE R L W +
Sbjct: 130 IHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAI 189
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I G + RANEA+ +F M G EP+ T+ SV ++C G L L ++H V
Sbjct: 190 IGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKT 249
Query: 248 EMGA--ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
E + ++ +L+ MY K G + A +F+ M +RN+ +W++MI G A++G+ EAL+ F
Sbjct: 250 EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECF 309
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
R++ + + PN ITFVGVLSAC H G ++ G+ F MK + +EP + HYGC+VDLL R
Sbjct: 310 RQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSR 369
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G++ EA+++++ M KP+V++WG L+ C+ G++E+AE V ++ LEP N GVYVVL
Sbjct: 370 DGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVL 429
Query: 426 SNMYA 430
+N+YA
Sbjct: 430 ANVYA 434
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 233/430 (54%), Gaps = 15/430 (3%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
P + S + D+ K +H+ ++ S + + A+ LL ++ ++
Sbjct: 111 PFVLKACSFIYDQVSG----KCVHSCILKSGFEANVYVATGLLNM--YVECKNMESGLKV 164
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F+ I N W LI + P +A+ ++ M R G N+ T L AC+ R +
Sbjct: 165 FDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDV 224
Query: 132 NCCKQIHTHVSKSGLDLDLHVVN-------CLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
+ + +H V K+G D + N +V Y+ LN AR++F+++ R + W
Sbjct: 225 DTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAW 284
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
MI+ Y Q R NEAL LF ML GF P+ T SVLS CA+ L LGE VH ++
Sbjct: 285 NCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLK 344
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFD-SMPERNIATWNAMISGLASHGHAEEALD 303
L TAL+ MY KNG L A+ +F+ S+ ++++ W +MI+ LA HGH EAL
Sbjct: 345 SNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALS 404
Query: 304 LFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
LF+ ++++ +VP+ IT++GVL AC H G ++ ++ F M + YGI P+ EHY CMVDL
Sbjct: 405 LFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDL 464
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
L R G EAE+L++ M +P++ +WGALL C+ H NI VA +V + LEP G+Y
Sbjct: 465 LSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIY 524
Query: 423 VVLSNMYAEA 432
+LSN+YA +
Sbjct: 525 ALLSNIYANS 534
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 211/400 (52%), Gaps = 18/400 (4%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMI-----ISSRIQDHFAASRLLAFCALSSSGD-LSY 67
P LSLL KCK++ Q K HA ++ I+++I S+L+ FC S + +Y
Sbjct: 4 PNTILSLLP-KCKTLLQFKTSHALILTTPTTINTKI---IPLSKLIDFCVDSHFDEYFNY 59
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF I SPN +++N++I+ A S NP ++ LY M + G++P+ TF FVLKACS
Sbjct: 60 ANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSF 119
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ K +H+ + KSG + +++V L+ Y ++ + +VFD+I + WT +
Sbjct: 120 IYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCL 179
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I+GY + + EAL +F +M G E N VT+ + L ACA+ ++ G VH V G+
Sbjct: 180 INGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGY 239
Query: 248 E-------MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+ IL TA+V MY K G L A+ LF+ MPERNI WN MI+ + E
Sbjct: 240 DPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNE 299
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL LF + P+ TF+ VLS C + +G + + + + I ++
Sbjct: 300 ALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKS-NMAKDIALATALL 358
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
D+ + G++ A+++ + K DVVMW +++ A HG+
Sbjct: 359 DMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGH 398
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 234/453 (51%), Gaps = 37/453 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSR--IQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
L LL C + LKQIHAQ + I+ A + + L + D A ++F I
Sbjct: 6 LKLLLQSCADLVTLKQIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRD---AQKVFGYI 62
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
Q P+ + +LI S+ P KA ++ + G P+ H+ L AC + L K
Sbjct: 63 QDPDRVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLLNGK 122
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCY-------------------SVSS------------ 164
+H + + L + V N L+ Y VSS
Sbjct: 123 LVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCN 182
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF-EPNSVTLASVL 223
L +AR+VFDE+ R WT MI+GY + L +F QM EG +P +T +VL
Sbjct: 183 GLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVL 242
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
S CA G + G+ VH ++ + G + AL+ MY+K G + A +FD + ++++
Sbjct: 243 SGCADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKKDVF 302
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+W MIS +SHG AL++F + + ++PND+TF+ VLS C H+G + ++F M
Sbjct: 303 SWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKLFNGM 362
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ YG EPKIEHYGCMVDLL R G + EA+ELI M PD V+W +LL+AC N N+ +
Sbjct: 363 IQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLSACMNQRNLGL 422
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
AE K+II LEP++ GVYV+LSN+Y A MK
Sbjct: 423 AEIAGKKIIELEPHDDGVYVLLSNIYHVANRMK 455
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 167/349 (47%), Gaps = 44/349 (12%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC-LVRCYSVSSDLNNARQVF 173
+ + +L++C+++ +L KQIH GL + C LV Y+ + +A++VF
Sbjct: 3 RQSLKLLLQSCADLVTL---KQIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRDAQKVF 59
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
I++ +T++I+ Y + +A +F +++ EG P+S ++ LSAC + L
Sbjct: 60 GYIQDPDRVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLL 119
Query: 234 LGEKVHVFVKMRGFEMGA--ILGTALVHMYTKNG-------------------------- 265
G+ VH + F++GA I+G AL+ MY +NG
Sbjct: 120 NGKLVHGMIFR--FQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNG 177
Query: 266 -----ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDIT 319
L A+ +FD MP RN W AMI+G G L++FR+++ E + P IT
Sbjct: 178 FVMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVIT 237
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
V VLS C G D G+ + G + +V ++ + ++D+ + G V A ++ R+
Sbjct: 238 AVAVLSGCADLGAHDHGQAVHGYISKV-NLDKGVTVSNALMDMYSKGGCVESAMKIFDRL 296
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
V K DV W +++A +HG A V +++ + PN+ +VLS
Sbjct: 297 V-KKDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLS 344
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 226/392 (57%), Gaps = 1/392 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G L A +LF+ + N WN++I A + NP +A+ ++ M G P +
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L AC+++ L + IH + GLD ++ VVN L+ Y +++ A +F ++++R
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
TL W MI G+AQ+ R +AL F QM +P++ T SV++A A+ + +H
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V + + TALV MY K GA+ A+ +FD M ER++ TWNAMI G +HG +
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
AL+LF +++K I PN +TF+ V+SAC H+G ++ G + F MK Y IE ++HYG M
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G++ EA + I +M KP V ++GA+L AC+ H N+ AE+ + + L P++
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 420 GVYVVLSNMYAEAESMKMQLEILLVQVLFAGL 451
G +V+L+N+Y A SM ++ + V +L GL
Sbjct: 642 GYHVLLANIY-RAASMWEKVGQVRVSMLRQGL 672
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 208/384 (54%), Gaps = 6/384 (1%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSI 75
P +LL ++C S+ +L+QI + + Q+HF ++L++ FC G + A R+F I
Sbjct: 39 PAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY---GSVDEAARVFEPI 95
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
S + +++T+++ A + DKA+ ++ MR P + FT++LK C + L K
Sbjct: 96 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 155
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+IH + KSG LDL + L Y+ +N AR+VFD + R L W T+++GY+Q+
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
A AL + M E +P+ +T+ SVL A + + +G+++H + GF+ + T
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
ALV MY K G+L A+ LFD M ERN+ +WN+MI + + +EA+ +F+K+ E + P
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
D++ +G L AC G ++ GR I + G++ + ++ + +C +V A +
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIH-KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 376 IKRMVWKPDVVMWGALLAACKNHG 399
++ + +V W A++ +G
Sbjct: 395 FGKLQSRT-LVSWNAMILGFAQNG 417
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 188/388 (48%), Gaps = 6/388 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH ++ S D FA + L A ++ A ++F+ + + WNT++ +
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYA--KCRQVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ + +M P+ T VL A S +R ++ K+IH + +SG D ++
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y+ L ARQ+FD + R + W +MI Y Q+ EA+++F +ML EG
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P V++ L ACA G LE G +H G + + +L+ MY K + A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
++F + R + +WNAMI G A +G +AL+ F ++ + P+ T+V V++A
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ I G + R ++ + +VD+ +CG ++ A LI M+ + V W A+
Sbjct: 453 ITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAM 510
Query: 392 LAACKNHGNIEVAERVVKEII--ALEPN 417
+ HG + A + +E+ ++PN
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPN 538
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 239/432 (55%), Gaps = 33/432 (7%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
++ HA + + D + S L+ + G + A ++F+ + S +WN ++R
Sbjct: 69 RKAHAAAVKTGFRWDAYTGSSLMEM--YTMLGRVDIARKVFDEMPSRALVLWNMMVRCYI 126
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS-GLDL-- 148
A+ L M R+G P++ T + ACS R L+ ++IH ++ G +L
Sbjct: 127 RCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPV 186
Query: 149 -----DLHVVN----------------------CLVRCYSVSSDLNNARQVFDEIRNRTL 181
D++ N LV Y ++ L+ AR +F++ + + L
Sbjct: 187 ANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDL 246
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
+WT MI+ Q EAL LF M M+ EP+ T+ ++L+ CA G L+ GE +H +
Sbjct: 247 ILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQY 306
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ R ++ A+LGTAL+ MY+K G + K+ +F M R+ W A+I GLA++G A A
Sbjct: 307 AEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRA 366
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L+LF+ +++ ++ P+ +TF+GVLSACCH G +D GR+ F +M+ VY IEP++EHY C+V+
Sbjct: 367 LELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVN 426
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVV-MWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
LLGR G + EAE LI + D + ++GALL ACK HGN+E++ER+ K I +
Sbjct: 427 LLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITD 486
Query: 421 VYVVLSNMYAEA 432
V +++SN+YA A
Sbjct: 487 VNLLMSNVYATA 498
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 173/350 (49%), Gaps = 38/350 (10%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N LIR A + + + +Y ++R G + T+ FVL+A ++ ++ H K
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVK 77
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+G D + + L+ Y++ ++ AR+VFDE+ +R L +W M+ Y + + A+ L
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVAL 137
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGTALVHMYT 262
+QM G P+ VTL + ++AC+++ L LG ++HV++ + GF + + AL+ MYT
Sbjct: 138 SEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLP--VANALLDMYT 195
Query: 263 KNGALAKAKALFDSMPERNIAT-------------------------------WNAMISG 291
KN L +A LF+ MP RNI + W AMI+
Sbjct: 196 KNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINA 255
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIE 350
HG EEAL LFR ++ +++ P+ T V +L+ C + G +D G I + +R I+
Sbjct: 256 CVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKID 315
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ ++D+ +CG + ++ E+ RM + D W A++ +G
Sbjct: 316 AVLGT--ALIDMYSKCGHIEKSLEVFWRMQGR-DATAWTAIICGLATNGQ 362
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 224/404 (55%), Gaps = 33/404 (8%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
SG + A LF I + F W +I KA+ LY MR++ PN+ +
Sbjct: 272 SGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDL 331
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGL------------------DLDLHVV---------- 153
L AC S+ +Q H+ + K+G +DL +
Sbjct: 332 LSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHL 391
Query: 154 ---NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
N ++ ++ + ++ ARQ+FD + + + W+TMISGYAQ+ + AL LF M+
Sbjct: 392 TSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDS 451
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
EPN +T+ SV SA A G L G H +V + + L A++ MY K G++ A
Sbjct: 452 KVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTA 511
Query: 271 KALFDSMPERN--IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+F + ++ ++ WNA+I GLA HGHA +L++F L++ I N ITF+GVLSACC
Sbjct: 512 LDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACC 571
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
HAG ++VG + F SMK +G+EP I+HYGC+VDLLGR G++ EAEE+++ M K DVV+W
Sbjct: 572 HAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIW 631
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
G LLA+ + HG +E+ ER + + L+P++ V+LSN+YA+A
Sbjct: 632 GTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADA 675
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 176/400 (44%), Gaps = 66/400 (16%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L A +LF + + T+I A + +AI ++ +MR G APN+ T V+ A
Sbjct: 143 LENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSA 202
Query: 125 CSNVRSLNCCKQIHTHVSK---SGLDLD----LHVV------------------------ 153
CS++ + C+ +H V K GL L LH+
Sbjct: 203 CSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSW 262
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N +++ Y S ++ AR++F+ I R + W MI G+ Q R +AL+L+ M
Sbjct: 263 NVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLH 322
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY------------ 261
PN V + +LSAC QS +E G + H + GF + ++ Y
Sbjct: 323 PNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQ 382
Query: 262 -------------------TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
TKNG + +A+ +FD MPE+++ +W+ MISG A + + AL
Sbjct: 383 YQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVAL 442
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVD 361
DLF + ++ PN+IT V V SA G + GR + +V + + ++D
Sbjct: 443 DLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLS--AAIID 500
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVM-WGALLAACKNHGN 400
+ +CG + A ++ +++ K V W A++ HG+
Sbjct: 501 MYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 540
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 142/328 (43%), Gaps = 63/328 (19%)
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN-QHTFTFVLKACSNVRSLN 132
S P + W + SS P + + ++N R + + + + + LK C++ +++
Sbjct: 19 SFPPPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDCELSVVSALKYCASSSAIS 78
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCY--------------------SVSSD------- 165
+QIH V K G + + ++N L+ Y SVS +
Sbjct: 79 SGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYV 138
Query: 166 ----LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLAS 221
L NARQ+F ++ R +TTMI G AQ+ EA+ +F M G PN VT+AS
Sbjct: 139 KLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMAS 198
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
V+SAC+ G + +H V F ++ T L+HMY +L K LF+ MP RN
Sbjct: 199 VMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRN 258
Query: 282 IATWNAMISGLASHGHAEEALDLFRK-------------------------------LEK 310
+WN M+ G G ++A +LF + + K
Sbjct: 259 TVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRK 318
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQ 338
+ PN++ V +LSAC + I+ GRQ
Sbjct: 319 SDLHPNEVLIVDLLSACGQSVSIEEGRQ 346
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 5/259 (1%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+ H +S ++ + +G + A ++F+ + + F W+T+I A + PD A+ L+
Sbjct: 388 KSHLTSSNVM-IVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFH 446
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M + PN+ T V A + + L + H +V + L+ ++ ++ Y+
Sbjct: 447 GMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCG 506
Query: 165 DLNNARQVFDEIRNRTLNV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
++ A VF +I+++T V W +I G A AN +L +F + + NS+T V
Sbjct: 507 SIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGV 566
Query: 223 LSACAQSGCLELGEKVHVFVKMR-GFEMGAILGTALVHMYTKNGALAKAKALFDSMPER- 280
LSAC +G +E+GE+ +K + G E LV + + G L +A+ + +MP +
Sbjct: 567 LSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKA 626
Query: 281 NIATWNAMISGLASHGHAE 299
++ W +++ +HG E
Sbjct: 627 DVVIWGTLLASSRTHGEVE 645
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 239/433 (55%), Gaps = 32/433 (7%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
Q + + + + +R+ + AA+ G + A ++F+ ++ + F W +I
Sbjct: 181 QAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISC 240
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ +A+ L+ +MR G+ ++ V+ AC+ + + H ++GL
Sbjct: 241 FQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSR 300
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDE----------------IRNRTL------------ 181
L+V N L+ YS ++ AR++FD ++N ++
Sbjct: 301 LNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPD 360
Query: 182 --NV-WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
NV WTTMISG Q+ +++EAL +F+ M +G +P+ VTL SV+SAC LE G+ +
Sbjct: 361 KDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSM 420
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H +++ + + ILGT+L+ MY K G L A +FD+M ER WNA+I GLA +G
Sbjct: 421 HEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLV 480
Query: 299 EEALDLFRKLEKEQI-VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
++LD+F ++E PN+ITF GVLSAC HAG ++ G+ F M+ Y I P I HYG
Sbjct: 481 MKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYG 540
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLLGR G V EAE LI+ M PDV WGALL +C HG+ EV ERV ++++ L+P+
Sbjct: 541 CMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPH 600
Query: 418 NHGVYVVLSNMYA 430
+ G + +LSN+YA
Sbjct: 601 HDGFHTMLSNIYA 613
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 175/400 (43%), Gaps = 50/400 (12%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY--ATRLFNSIQSPNHF 81
+C S L QIHAQ + S + D FAASRL+ F + L + + RL + + PN F
Sbjct: 13 RCSSARHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSLRLLHVVHRPNAF 72
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
N +++A P + LY +M AP+ +T T + AC+ R++ +Q+H H
Sbjct: 73 SCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAACATRRAIEEGRQVHCHA 129
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+ G +L++ N L+ YS L +AR+VFD W T+++ Y Q+ ++A+
Sbjct: 130 VRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAV 189
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
+F +M P E GA +++V ++
Sbjct: 190 GVFARM------P---------------------------------ERGAAAVSSMVSLF 210
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+ G + +A+ +FD + +++ TW AMIS +G EAL LF + E ++ V
Sbjct: 211 GRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMV 270
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
V++AC G G R G+ ++ ++ + V+ A L
Sbjct: 271 CVVAACARLEVTRNGEMCHGLAFRA-GLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQC 329
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
D W +++A +G+++ A KE+ + P+ V
Sbjct: 330 L-DQFSWNSMIAGYLKNGSVKDA----KELFTVMPDKDNV 364
>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 216/369 (58%), Gaps = 3/369 (0%)
Query: 65 LSYATRLFNSI-QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
LS A +LF I + N WNT+++ K I L+ ++ G + + T V+
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
+CS++ ++ K +H +V K+ LDL + VVN L+ Y DL A ++F E +
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVIT- 500
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI+ Y ++ +A+ LFD+M+ E F+P+S+TL ++L AC +G LE G+ +H ++
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
EM L AL+ MY K G L K++ LFD+ +++ WN MISG HG E A+
Sbjct: 561 ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIA 620
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF ++E+ + P TF+ +LSAC HAG ++ G+++F M + Y ++P ++HY C+VDLL
Sbjct: 621 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLL 679
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
R G + EAE + M + PD V+WG LL++C HG E+ R+ + +A +P N G Y+
Sbjct: 680 SRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYI 739
Query: 424 VLSNMYAEA 432
+L+NMY+ A
Sbjct: 740 MLANMYSAA 748
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 178/384 (46%), Gaps = 9/384 (2%)
Query: 25 CKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C ++ LK+ +H + + F S + +F S SG+ S A F + + F
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSF--YSKSGNPSEAYLSFRELGDEDMF 297
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
W ++I + A S + +++ ++ M+ G P+ + ++ + + K H V
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR-TLNVWTTMISGYAQSFRANEA 200
+ LD V N L+ Y L+ A ++F I W TM+ GY + +
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ LF ++ G E +S + SV+S+C+ G + LG+ +H +V ++ + +L+ +
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 477
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G L A +F + N+ TWNAMI+ +E+A+ LF ++ E P+ IT
Sbjct: 478 YGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITL 536
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V +L AC + G ++ G+ I + E + ++D+ +CG + ++ EL
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595
Query: 381 WKPDVVMWGALLAACKNHGNIEVA 404
K D V W +++ HG++E A
Sbjct: 596 QK-DAVCWNVMISGYGMHGDVESA 618
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 162/312 (51%), Gaps = 11/312 (3%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
+L D+ S+ L++ +A +I ++ F AS+L++ + +S G + ++R+F+ + +
Sbjct: 32 ILCDQSLSLESLRKHNALIITGGLSENIFVASKLIS--SYASYGKPNLSSRVFHLVTRRD 89
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F+WN++I+A S+ + +++ + +M +G +P+ T V+ AC+ + + +H
Sbjct: 90 IFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHG 149
Query: 140 HVSK-SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V K G D + V V YS L +A VFDE+ +R + WT +ISG+ Q+ +
Sbjct: 150 LVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESE 209
Query: 199 EALMLFDQMLMEGFE---PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
L +M G + PN TL AC+ G L+ G +H F G + +
Sbjct: 210 GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQS 269
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
++ Y+K+G ++A F + + ++ +W ++I+ LA G EE+ D+F +++ + + P
Sbjct: 270 SMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP 329
Query: 316 NDITFVGVLSAC 327
+ GV+ +C
Sbjct: 330 D-----GVVISC 336
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 178/420 (42%), Gaps = 37/420 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGF---APNQH 116
S G L A +F+ + + W +I + + + M G PN
Sbjct: 172 SKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPR 231
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T +ACSN+ +L + +H K+GL V + + YS S + + A F E+
Sbjct: 232 TLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+ + WT++I+ A+S E+ +F +M +G P+ V ++ +++ + + G+
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASH 295
H FV F + + + +L+ MY K L+ A+ LF + E N WN M+ G
Sbjct: 352 AFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKM 411
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR------VYGI 349
+ ++LFRK++ I + + V+S+C H G + +G+ + + + + +
Sbjct: 412 KCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVV 471
Query: 350 EPKIEHYGCMVDL-----------------------LGRCGKVLEAEELIKRMV---WKP 383
I+ YG M DL C + +A L RMV +KP
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKP 531
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPN-NHGVYVVLSNMYAEAESMKMQLEIL 442
+ LL AC N G++E + + + I E N + L +MYA+ ++ E+
Sbjct: 532 SSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 6/282 (2%)
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C SL ++ + + GL ++ V + L+ Y+ N + +VF + R + +W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-K 243
++I + + +L F ML+ G P+ T V+SACA+ +G VH V K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
GF+ +G + V+ Y+K G L A +FD MP+R++ W A+ISG +G +E L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 304 LFRKLE---KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
K+ + PN T AC + G + GR + G + G+ M
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVK-NGLASSKFVQSSMF 272
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ G EA L R + D+ W +++A+ G++E
Sbjct: 273 SFYSKSGNPSEA-YLSFRELGDEDMFSWTSIIASLARSGDME 313
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 34/173 (19%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L + LF++ + WN +I + + AI L+ M + P TF +L
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 641
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC++ + K++ + + + +L +CLV S S +L A
Sbjct: 642 SACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAE------------ 689
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+T++S F P+ V ++LS+C G E+G
Sbjct: 690 --STVMS--------------------MPFSPDGVIWGTLLSSCMTHGEFEMG 720
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 229/401 (57%), Gaps = 3/401 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
QIH I S + A L A G L+ A R+F+ I+ P+ WN +I A+
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYA--RCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+ D+A+ ++ MR +GF P+ + +L A + +L+ QIH+++ K G DL V
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLMEG 211
N L+ Y+ SDL +F++ RN +V W T+++ Q + E L LF ML+
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ +T+ ++L C + L+LG +VH + G + L+ MY K G+L +A+
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FDSM R++ +W+ +I G A G EEAL LF++++ I PN +TFVGVL+AC H G
Sbjct: 529 RIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVG 588
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G +++ +M+ +GI P EH C+VDLL R G++ EAE I M +PDVV+W L
Sbjct: 589 LVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L+ACK GN+ +A++ + I+ ++P N +V+L +M+A +
Sbjct: 649 LSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASS 689
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 4/374 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+ Q ++IH ++ S+ D + +L+ G L A +F+ + N + +
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGSLRDAREVFDFMPERNLVSYTS 138
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + + +AI LY+ M + P+Q F ++KAC++ + KQ+H V K
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
L N L+ Y + +++A +VF I + L W+++I+G++Q EAL
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 206 QMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+ML G F PN S L AC+ + G ++H AI G +L MY +
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G L A+ +FD + + A+WN +I+GLA++G+A+EA+ +F ++ +P+ I+ +L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
A + G QI + + +G + ++ + C + L + D
Sbjct: 379 CAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNAD 437
Query: 385 VVMWGALLAACKNH 398
V W +L AC H
Sbjct: 438 SVSWNTILTACLQH 451
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 5/307 (1%)
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
+ + F T+ ++ ACS+ RSL ++IH H+ S D + N ++ Y L
Sbjct: 59 KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSL 118
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+AR+VFD + R L +T++I+GY+Q+ + EA+ L+ +ML E P+ S++ AC
Sbjct: 119 RDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A S + LG+++H V I AL+ MY + ++ A +F +P +++ +W+
Sbjct: 179 ASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWS 238
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
++I+G + G EAL +++ + PN+ F L AC D G QI G +
Sbjct: 239 SIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 298
Query: 346 VYGIEPKIEHYGC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
I GC + D+ RCG + A + + + +PD W ++A N+G + A
Sbjct: 299 SELAGNAIA--GCSLCDMYARCGFLNSARRVFDQ-IERPDTASWNVIIAGLANNGYADEA 355
Query: 405 ERVVKEI 411
V ++
Sbjct: 356 VSVFSQM 362
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 224/415 (53%), Gaps = 2/415 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L + K++ +++HA+++ + F A+ +L G + +R F+ ++
Sbjct: 39 LLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIM--YGKCGGMEDLSRAFSGMKR 96
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
N WN +I A A + AI +++ M G P+ TFT VL A + K +
Sbjct: 97 RNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKLV 156
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + G V L+ YS ++ ARQVFDE+ + + W+ MI+ YAQ+
Sbjct: 157 HDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTGHG 216
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EAL +F +M EG + N +T +V+ AC + +H + G E +LGTAL
Sbjct: 217 TEALEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIEAGLESNTVLGTAL 276
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
++MY K G LA+AK +FD + ER++ W+A++ A HGH AL LF +++E + PND
Sbjct: 277 LNMYGKCGGLAEAKKIFDKLAERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPND 336
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+TFVGVL ACCH GF+ GR F S+ R + + P H CM+D+LGR GK+ EAE I
Sbjct: 337 VTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESFIA 396
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
RM K + + W L +C+++G++E +R +++ P+ Y+ L++MY +A
Sbjct: 397 RMPVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLASMYTDA 451
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 222/402 (55%), Gaps = 34/402 (8%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLK 123
+ A +F I + W TLI + A+ Y+ M G + ++K
Sbjct: 226 IDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMK 285
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS------------SD------ 165
AC+ ++ +Q+HT + K+G D V LV Y SD
Sbjct: 286 ACARYSAVTEGQQLHTVILKNGFDALAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTAS 345
Query: 166 -------------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ AR++FD++ R W+TMISGY Q+ R++ AL LF ML
Sbjct: 346 WNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSI 405
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
EPN VTLAS LSA A SG L+ G+ +H ++ R ++ L + L+ MY K G++A A
Sbjct: 406 EPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAVQ 465
Query: 273 LFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
F+ + ++ +++ WNAMI LA HG+A +LDLF +L++ I PN ITF+GVLSACCHA
Sbjct: 466 FFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHA 525
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + G+ F SM R YGI+P I+HYGCMVDLLGR G + EAE+L+ M KPDVV+WG+
Sbjct: 526 GTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWGS 585
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+L+A + GN+ + ER +E+ L+ + + LSN+YA+A
Sbjct: 586 ILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADA 627
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 187/452 (41%), Gaps = 73/452 (16%)
Query: 44 IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS--PNHFMWNTLIRAQASSLNPDKAIF 101
++D A + +LA AL+ +G L A L + + + TL+ A A + + +A+
Sbjct: 73 LRDATARNSILA--ALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAVA 130
Query: 102 LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS 161
++ +M PN+ T + A + + IH + LD + V LV Y+
Sbjct: 131 VFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYA 190
Query: 162 VSSDLNNARQVFDEIRNR---TLNV----------------------------WTTMISG 190
+L +AR +FD + +R T NV W T+I G
Sbjct: 191 GVLELCSARALFDGMTHRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDG 250
Query: 191 YAQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
Y + ++A+ + QM+ E G V L ++ ACA+ + G+++H + GF+
Sbjct: 251 YICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDA 310
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA---------------------- 287
A + LVH Y G + A+ F + + A+WNA
Sbjct: 311 LAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMP 370
Query: 288 ---------MISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
MISG G ++ AL LF + I PN++T LSA +G +D G+
Sbjct: 371 ERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKW 430
Query: 339 IFGS-MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-PDVVMWGALLAACK 396
I M R + + ++D+ +CG + +A + R+ K V W A++ +
Sbjct: 431 IHDYIMNRPVQLTDNLS--SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLA 488
Query: 397 NHGNIEVAERVVKEI--IALEPNNHGVYVVLS 426
HG ++ + ++ +++PN+ VLS
Sbjct: 489 IHGYAHMSLDLFSQLQRTSIKPNSITFIGVLS 520
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 148/361 (40%), Gaps = 71/361 (19%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHVVNCLVRCYS-VSSDLNNARQVFDEI- 176
F++ + L C +Q+H +KSGL ++ V N ++ YS + S L +A Q+FDE
Sbjct: 11 FLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETP 70
Query: 177 --------RNRTLNV--------------------------WTTMISGYAQSFRANEALM 202
RN L +TT+++ +A++ A A+
Sbjct: 71 PPLRDATARNSILAALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAVA 130
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
+F ML E PN TLA ++A A+ G +H F R + I+ T LVH Y
Sbjct: 131 VFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYA 190
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIV------- 314
L A+ALFD M RN TWN M++G + A ++F ++ E++++
Sbjct: 191 GVLELCSARALFDGMTHRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDG 250
Query: 315 ----------------------PND--ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
ND + V ++ AC + G+Q+ + + G +
Sbjct: 251 YICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILK-NGFD 309
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
+V G CG ++ ++ R+ K W ALLAA +G I A + +
Sbjct: 310 ALAFVQATLVHFYGCCG-LIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDD 368
Query: 411 I 411
+
Sbjct: 369 M 369
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 8/282 (2%)
Query: 36 AQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLN 95
AQM + H A+ L AL +G + A LF+ + + W+T+I +
Sbjct: 331 AQMTFRLSDKSHTASWNAL-LAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGR 389
Query: 96 PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC 155
D A+ L+ +M T PN+ T L A ++ +L+ K IH ++ + L ++ +
Sbjct: 390 SDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSG 449
Query: 156 LVRCYSVSSDLNNARQVFDEIRNR--TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
L+ Y+ + +A Q F+ + ++ +++ W MI A A+ +L LF Q+ +
Sbjct: 450 LIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIK 509
Query: 214 PNSVTLASVLSACAQSGCLELGE-KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PNS+T VLSAC +G + G+ + G + +V + + G L +A+
Sbjct: 510 PNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQ 569
Query: 273 LFDSMPER-NIATWNAMISGLASHGH---AEEALDLFRKLEK 310
L MP + ++ W +++S + G+ E A + KL++
Sbjct: 570 LVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQ 611
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 249/412 (60%), Gaps = 8/412 (1%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ +++H ++ + QD F A++L+ + S D A ++F+ ++ +++N L
Sbjct: 85 SLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSID--NARKVFDKTRNRTIYVYNAL 142
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN----VRSLNCCKQIHTHVS 142
RA + + + ++ + +Y M G ++ T+T+VLKAC V LN ++IH H+
Sbjct: 143 FRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHIL 202
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+ G D +H++ LV Y+ ++NA VF+++ + + W+ MI+ YA++ +A EAL
Sbjct: 203 RHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALE 262
Query: 203 LFDQMLMEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
LF ++++E + PNSVT+ SVL ACA LE G +H ++ +G + + +ALV M
Sbjct: 263 LFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTM 322
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y + G L + +FD M +R++ +WN++IS HG ++A+ +F ++ + P+ I+F
Sbjct: 323 YARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISF 382
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V VL AC HAG +D G+ +F SM +GI P +EHY CMVDLLGR ++ EA ++I+ M
Sbjct: 383 VSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMR 442
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+P +WG+LL +C+ H N+E+AER + LEP N G YV+L+++YAEA
Sbjct: 443 IEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEA 494
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 160/293 (54%), Gaps = 8/293 (2%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P QHT+ ++ +C++ SL +++H H+ ++G D D + L+ YS ++NAR+V
Sbjct: 68 PAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKV 127
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC- 231
FD+ RNRT+ V+ + + + E L ++ +M G + T VL AC S C
Sbjct: 128 FDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECF 187
Query: 232 ---LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
L G ++H + G++ + T LV MY K G ++ A +F+ MP +N+ +W+AM
Sbjct: 188 VSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAM 247
Query: 289 ISGLASHGHAEEALDLFRK--LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
I+ A +G A EAL+LFR+ LE + + PN +T V VL AC ++ GR I G + R
Sbjct: 248 IACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILR- 306
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
G++ + +V + RCGK+ + + +M K DVV W +L+++ HG
Sbjct: 307 KGLDSILPVISALVTMYARCGKLELGQRVFDQMD-KRDVVSWNSLISSYGVHG 358
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H ++ K+ +D D+ + N L+ Y +L+ A ++F + R + W T+IS Y S
Sbjct: 413 VHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQ-RDVVTWNTLISSYTHSGH 471
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
EA+ LFD+M+ E PNS TL VLSAC LE G+ VH ++K GFE+ LGTA
Sbjct: 472 YAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTA 531
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
LV MY K G L +++ LF+SM E+++ +WN MISG HG A A+++F+++E+ + PN
Sbjct: 532 LVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPN 591
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
ITF+ +LSAC HAG++D G+Q+F M+ Y I+P ++H+ CM DLLGR G + EAE+L+
Sbjct: 592 AITFLSLLSACTHAGYVDEGKQLFDRMQ-YYSIKPNLKHFACMADLLGRSGNLQEAEDLV 650
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ M PD +WG LL+ACK H IE+ RV K I +P N G Y++LSNMY
Sbjct: 651 QSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYG 704
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 209/468 (44%), Gaps = 64/468 (13%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
S L+++ +++ L + HA +I + + F +S+L++ A S +T +F+S
Sbjct: 36 SFLSNQTQTLQSLHKSHALIITTGNANNVFISSKLISLYA--SFRKPHSSTYVFDSTNQK 93
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ F+WN++I++ S+ N KA Y+ MR PNQ T ++ C+ + L K IH
Sbjct: 94 DTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIH 153
Query: 139 THVSKSGLDLDLHVV-NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
VSKSGL + V + V Y+ + +A +FDEI R + WT ++ GY + +
Sbjct: 154 GLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDS 213
Query: 198 NEALMLFDQMLM---EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+ L +M +G + NS TL AC G + G +H G ++
Sbjct: 214 EKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQ 273
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
++L+ MY+K G + +A F + ++++ +W ++I A G E L+LF ++ + +
Sbjct: 274 SSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVY 333
Query: 315 PNDIT-------------------FVG----------------VLSACCHAGFIDVGRQI 339
P+ I F G +LS C G ++ ++
Sbjct: 334 PDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKL 393
Query: 340 FGSMKR---------VYG----------IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
F + V+G ++ + ++D+ G+ G + A ++ R
Sbjct: 394 FDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRT- 452
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+ DVV W L+++ + G+ A + E+I+ L PN+ + +VLS
Sbjct: 453 -QRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLS 499
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 135/269 (50%), Gaps = 8/269 (2%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H +I +S +D A+ L+ G+LS A ++F Q + WNTLI + S
Sbjct: 413 VHCYIIKNSVDEDVSIANSLIDM--YGKGGNLSIAWKMFCRTQR-DVVTWNTLISSYTHS 469
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+ +AI L+ M PN T VL AC ++ SL K +H ++ + G +L++ +
Sbjct: 470 GHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLG 529
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
LV Y+ L +R++F+ ++ + + W MISGY AN A+ +F QM +
Sbjct: 530 TALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVK 589
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG--TALVHMYTKNGALAKAK 271
PN++T S+LSAC +G ++ G++ +F +M+ + + L + + ++G L +A+
Sbjct: 590 PNAITFLSLLSACTHAGYVDEGKQ--LFDRMQYYSIKPNLKHFACMADLLGRSGNLQEAE 647
Query: 272 ALFDSMPE-RNIATWNAMISGLASHGHAE 299
L SMP + W ++S H E
Sbjct: 648 DLVQSMPICPDGGVWGTLLSACKIHNEIE 676
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 227/400 (56%), Gaps = 2/400 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
QIHA + + + D F ++ L+ S G + A LF + + WN ++
Sbjct: 1058 QIHACAMKAGVVLDSFVSTALID--VYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIV 1115
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
S + KA+ LY+ M+ +G +Q T KA + L KQIH V K G +LDL V
Sbjct: 1116 SGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFV 1175
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ ++ Y ++ +AR+VF EI + WTTMISG ++ + AL + QM +
Sbjct: 1176 TSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKV 1235
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ T A+++ AC+ LE G ++H + + T+LV MY K G + A+
Sbjct: 1236 QPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARG 1295
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
LF R IA+WNAMI GLA HG+A+EAL F+ ++ ++P+ +TF+GVLSAC H+G
Sbjct: 1296 LFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGL 1355
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ + F SM++ YGIEP+IEHY C+VD L R G++ EAE++I M ++ M+ LL
Sbjct: 1356 VSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLL 1415
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AC+ + E +RV ++++ALEP++ YV+LSN+YA A
Sbjct: 1416 NACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAA 1455
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 165/350 (47%), Gaps = 5/350 (1%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
+G +S A +F + + WNT+I S + ++ +++++ R P+Q T V
Sbjct: 983 AGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASV 1042
Query: 122 LKACSNVR-SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
L+ACS++ QIH K+G+ LD V L+ YS + A +F
Sbjct: 1043 LRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFD 1102
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
L W ++ GY S +AL L+ M G + +TL + A L+ G+++H
Sbjct: 1103 LASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHA 1162
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
V RGF + + + ++ MY K G + A+ +F +P + W MISG +G E
Sbjct: 1163 VVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEH 1222
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY-GIEPKIEHYGCM 359
AL + ++ ++ P++ TF ++ AC ++ GRQI ++ ++ +P + +
Sbjct: 1223 ALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSL 1280
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
VD+ +CG + +A L KR + + W A++ HGN + A + K
Sbjct: 1281 VDMYAKCGNIEDARGLFKRTNTRR-IASWNAMIVGLAQHGNAKEALQFFK 1329
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 166/342 (48%), Gaps = 6/342 (1%)
Query: 66 SYATRLF-NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
+YAT+LF + +WN + +A+ +++M + A + TF +L
Sbjct: 885 AYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTV 944
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
+ + L KQIH V +SGLD + V NCL+ Y + ++ AR VF ++ L W
Sbjct: 945 VAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISW 1004
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ-SGCLELGEKVHVFVK 243
TMISG S ++ +F +L + P+ T+ASVL AC+ G L ++H
Sbjct: 1005 NTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAM 1064
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
G + + + TAL+ +Y+K G + +A+ LF + ++A+WNA++ G G +AL
Sbjct: 1065 KAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALR 1124
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDL 362
L+ +++ + IT V A + G+QI +KR + ++ + ++D+
Sbjct: 1125 LYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVT--SGVLDM 1182
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+CG++ A + + PD V W +++ C +G E A
Sbjct: 1183 YLKCGEMESARRVFSE-IPSPDDVAWTTMISGCVENGQEEHA 1223
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 170/369 (46%), Gaps = 38/369 (10%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM--WNTLIRA 89
K+ HA+++ S D F + L+ A G LS A +LF++ N + WN ++ A
Sbjct: 676 KRAHARILTSGHHPDRFVTNNLITMYA--KCGSLSSARKLFDTTPDTNRDLVTWNAILSA 733
Query: 90 QASSLNPDKAIF-LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
A+ + F L+ +RR+ + +HT V K C S + + +H + K GL
Sbjct: 734 LAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQW 793
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D+ V LV Y+ + AR +FD + R + +W M+ Y + EA++LF +
Sbjct: 794 DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853
Query: 209 MEGFEPNSVTLASV--LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
GF P+ VTL ++ + C ++ ++++ F+ A + MY +G+
Sbjct: 854 RTGFRPDDVTLRTLSRVVKCKKN-----------ILELKQFKAYA----TKLFMYDDDGS 898
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
++ WN +S G A EA+D F + ++ + +TFV +L+
Sbjct: 899 --------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTV 944
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
+++G+QI G + R G++ + C++++ + G V A + +M + D++
Sbjct: 945 VAGLNCLELGKQIHGIVMRS-GLDQVVSVGNCLINMYVKAGSVSRARSVFGQMN-EVDLI 1002
Query: 387 MWGALLAAC 395
W +++ C
Sbjct: 1003 SWNTMISGC 1011
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE- 279
S+L + L LG++ H + G + L+ MY K G+L+ A+ LFD+ P+
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 280 -RNIATWNAMISGLASHG-HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
R++ TWNA++S LA+H + + LFR L + + T V C +
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ G ++ G++ + G +V++ + G + EA L M + DVV+W ++ A
Sbjct: 781 SLHGYAVKI-GLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLWNVMMKA 835
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 228/412 (55%), Gaps = 34/412 (8%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRA--QASSLNPDKAIFLYMNMRRTGFAPNQH 116
S G ++YA ++F+ WN ++ + K +F+ M + +PN
Sbjct: 181 FSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSV 240
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
T +L ACS ++ L K I+ K G+ + +L + N L+ ++ +++ AR VFDE
Sbjct: 241 TLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDE 300
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF------------- 212
++ R + WT++++G+A + R + A FDQM +++G+
Sbjct: 301 MKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLF 360
Query: 213 --------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+P+ T+ S+L+ACA G LELGE ++ + +G AL+ MY K
Sbjct: 361 RDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKC 420
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + KAK +F+ M +++ TW AMI GLA++GH EEAL +F + + + P++IT++GV+
Sbjct: 421 GNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVM 480
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC H G + G+ F +M +GI+P + HYGCMVDLLGR G + EA E+I M KP+
Sbjct: 481 CACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPN 540
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
++WG+LL AC+ H N+++AE EI+ LEP N VYV+L N+YA + K
Sbjct: 541 SIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWK 592
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 207/427 (48%), Gaps = 46/427 (10%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P+SLL + C +M+++ QIH+Q I + +H ++++ FC SGD+ YA ++F+ I
Sbjct: 38 PISLL-ETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIP 96
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
P+ F+WNT+I+ + + + LY M P+ TF F+LK + +L K
Sbjct: 97 QPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKV 156
Query: 137 IHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+ H G LD +L V + +S+ +N AR++FD + W ++SGY +
Sbjct: 157 LLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFK 216
Query: 196 RANEALMLFDQM--LMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAI 252
R E+ LF +M E PNSVTL +LSAC++ L G+ ++ ++K E I
Sbjct: 217 RYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLI 276
Query: 253 LGTALVHMYTKNGALAKAKALFDS-------------------------------MPERN 281
L AL+ M+ G + A+ +FD MPER+
Sbjct: 277 LENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERD 336
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+W AMI G +E L LFR ++ + P++ T V +L+AC H G +++G
Sbjct: 337 YVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEW--- 393
Query: 342 SMKRVYGIEPKIEHY----GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
+ Y + KI++ ++D+ +CG V +A+++ M K D W A++ N
Sbjct: 394 --AKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQ-KKDKFTWTAMIVGLAN 450
Query: 398 HGNIEVA 404
+G+ E A
Sbjct: 451 NGHGEEA 457
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 117/260 (45%), Gaps = 24/260 (9%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++ A ++FN +Q + F W +I A++ + ++A+ ++ M P++ T+ V+
Sbjct: 421 GNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVM 480
Query: 123 KACSNVRSLNCCKQIHTHVS-KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
AC++V + K ++++ + G+ +L C+V + L A +V I N +
Sbjct: 481 CACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEV---IMNMPV 537
Query: 182 N----VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS----VTLASVLSACAQSGCLE 233
VW +++ A M +++L EP + V L ++ +AC + L
Sbjct: 538 KPNSIVWGSLLGACRVHKNVQLAEMAANEIL--ELEPENGAVYVLLCNIYAACKKWKNL- 594
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN--IATWNAMISG 291
V + RG + I G +L+ M NG + + A S P+ A M
Sbjct: 595 --HNVRKMMMERGIK--KIPGCSLMEM---NGIVYEFVAGDKSHPQSKEIYAKLENMKQD 647
Query: 292 LASHGHAEEALDLFRKLEKE 311
L++ G++ + ++F + +E
Sbjct: 648 LSNAGYSPDTSEVFLDVGEE 667
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 225/392 (57%), Gaps = 1/392 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G L A LF+ + N WN++I A + NP +A+ ++ M G P +
Sbjct: 282 AKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVM 341
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L AC+++ L + IH + LD ++ VVN L+ Y +++ A +F ++++R
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
T+ W MI G+AQ+ R EAL F QM +P++ T SV++A A+ + +H
Sbjct: 402 TIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V + + TALV MY K GA+ A+ +FD M ER++ TWNAMI G +HG +
Sbjct: 462 GVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGK 521
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
AL+LF +++K I PN +TF+ V+SAC H+G ++ G + F MK Y IEP ++HYG M
Sbjct: 522 AALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAM 581
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G++ EA + I +M KP V ++GA+L AC+ H N+ AE+V + + L P +
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDG 641
Query: 420 GVYVVLSNMYAEAESMKMQLEILLVQVLFAGL 451
G +V+L+N+Y A SM ++ + V +L GL
Sbjct: 642 GYHVLLANIY-RAASMWEKVGQVRVSMLRQGL 672
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 204/384 (53%), Gaps = 6/384 (1%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSI 75
P +LL ++C S+ +L+ I + + Q+H ++L++ FC G + A R+F I
Sbjct: 39 PAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFC---RYGSVDEAARVFEPI 95
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
+ ++ T+++ A + DKA+ ++ MR P + FT++LK C + L K
Sbjct: 96 DKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGK 155
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+IH + KSG LDL + L Y+ ++ AR+VFD + R L W T+++GY+Q+
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
A AL + + M E +P+ +T+ SVL A + + +G+++H + GF+ + T
Sbjct: 216 MARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIAT 275
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
ALV MY K G+L A+ LFD M ERN+ +WN+MI + + +EA+ +F+K+ E + P
Sbjct: 276 ALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKP 335
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
D++ +G L AC G ++ GR I + ++ + ++ + +C +V A +
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIH-KLSVELELDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 376 IKRMVWKPDVVMWGALLAACKNHG 399
++ + +V W A++ +G
Sbjct: 395 FGKLQSRT-IVSWNAMILGFAQNG 417
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 180/380 (47%), Gaps = 4/380 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH ++ S D FA + L A + A ++F+ + + WNT++ +
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYA--KCRQVHEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ + M P+ T VL A S +R + K+IH + ++G D ++
Sbjct: 213 QNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN 272
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y+ L AR +FD + R + W +MI Y Q+ EA+++F +ML EG
Sbjct: 273 IATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEG 332
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P V++ L ACA G LE G +H + + +L+ MY K + A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
++F + R I +WNAMI G A +G EAL+ F +++ + P+ T+V V++A
Sbjct: 393 SMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELS 452
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ I G + R ++ + +VD+ +CG ++ A LI M+ + V W A+
Sbjct: 453 ITHHAKWIHGVVMR-NCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAM 510
Query: 392 LAACKNHGNIEVAERVVKEI 411
+ HG + A + +E+
Sbjct: 511 IDGYGTHGIGKAALELFEEM 530
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 214/371 (57%), Gaps = 2/371 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L ++F+ + S + WN++I A+ ++ MR +G +P+ T +
Sbjct: 219 GMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLA 278
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDL-DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
A + + + +H ++ + G D+ D+ N +V Y+ S + A+++FD + R
Sbjct: 279 SAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDA 338
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLM-EGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W T+I+GY Q+ A+EA+ ++D M EG +P T SVL A + G L+ G ++H
Sbjct: 339 VSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHA 398
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
G + +GT ++ +Y K G L +A LF+ P R+ WNA+ISG+ HGH +
Sbjct: 399 LSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAK 458
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL LF ++++E I P+ +TFV +L+AC HAG +D GR F M+ YGI+P +HY CMV
Sbjct: 459 ALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMV 518
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
D+ GR G++ +A + I+ M KPD +WGALL AC+ HGN+E+ + + + L+P N G
Sbjct: 519 DMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVG 578
Query: 421 VYVVLSNMYAE 431
YV++SNMYA+
Sbjct: 579 YYVLMSNMYAK 589
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 182/358 (50%), Gaps = 8/358 (2%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D FA+ L+ A G + A R F+ ++ + WN ++ + +A+ L+
Sbjct: 103 DAFASGALVH--AYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGR 160
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M G A + T + VL C + +H + K GLD +L V N ++ Y
Sbjct: 161 MVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGM 220
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L R+VFD + +R L W ++ISG+ Q + A+ +F M G P+ +TL S+ SA
Sbjct: 221 LEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAIL-GTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AQ G + G VH ++ RG+++G I+ G A+V MY K + A+ +FDSMP R+ +
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340
Query: 285 WNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFVGVLSACCHAGFIDVGRQIFG-S 342
WN +I+G +G A EA+ ++ ++K E + P TFV VL A H G + G ++ S
Sbjct: 341 WNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+K G+ + C++DL +CGK+ EA L ++ + W A+++ HG+
Sbjct: 401 IKT--GLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP-RRSTGPWNAVISGVGVHGH 455
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 2/265 (0%)
Query: 136 QIHTHVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
Q+H + GL D LV Y + +A + FDE+R+R + W M+SG ++
Sbjct: 89 QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
RA EA+ LF +M+MEG ++VT++SVL C G L +H++ G + +
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
A++ +Y K G L + + +FD M R++ TWN++ISG G A+++F + +
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVS 268
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+ +T + + SA G I GR + M R I +VD+ + K+ A+
Sbjct: 269 PDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328
Query: 375 LIKRMVWKPDVVMWGALLAACKNHG 399
+ M + D V W L+ +G
Sbjct: 329 MFDSMPVR-DAVSWNTLITGYMQNG 352
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/403 (36%), Positives = 231/403 (57%), Gaps = 9/403 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ IH +++ S D A+ L F + G L A +F+S+ + WN +I A
Sbjct: 537 RTIHTRIVDSGFAADVRVATAL--FNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYV 594
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + AI L M+ G P++ TFT +L ACS+ L +QIH+ +++S L+ D+
Sbjct: 595 QGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIV 654
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEI------RNRTLNVWTTMISGYAQSFRANEALMLFD 205
+V L+ Y+ LNNAR++FD I +R L +WT+MI+ Y Q +AL L++
Sbjct: 655 MVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYE 714
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM E + VT SVL+ACA L G+ +H V RG + ++V MY K G
Sbjct: 715 QMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCG 774
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ +A +F+ ++I+ W A+I+ A HGH E+AL +FR+L ++ I +++TFV +LS
Sbjct: 775 SFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLS 834
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H G I+ G + F SM + GIEP +EH+ C+VDLL R G + AEE + RM +
Sbjct: 835 ACSHVGLIEEGCEFFASMAEL-GIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANT 893
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
++ ALLAAC+ HG++E A RV +++ AL+P + YV LSN+
Sbjct: 894 IVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSNI 936
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 198/396 (50%), Gaps = 15/396 (3%)
Query: 18 LSLLADKCKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
LS++ + C S+ +LK +HA +I S D S + + + G+ A ++F+
Sbjct: 421 LSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGISLVNMYAKCGTVGE---ARKVFDR 477
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I + + +WN++I A +P +A+ L+ M+ G +P++ TF VL AC N L
Sbjct: 478 INNRSRILWNSMITAYQEK-DPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENG 536
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+ IHT + SG D+ V L Y+ L AR VFD + R + W MI+ Y Q
Sbjct: 537 RTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQG 596
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
A+ L M +EG P+ T S+L+AC+ L G ++H ++ E ++
Sbjct: 597 RDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMV 656
Query: 255 TALVHMYTKNGALAKAKALFDSM------PERNIATWNAMISGLASHGHAEEALDLFRKL 308
T L+ MY G+L A+ +FD++ R++ W +MI+ HG +AL+L+ ++
Sbjct: 657 TGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQM 716
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
Q+ + +TF+ VL+AC H + G+ I + R G+ + +V + G+CG
Sbjct: 717 HSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMR-RGLATDVAVANSIVFMYGKCGS 775
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
EA + ++ K D+ +W AL+A+ HG+ E A
Sbjct: 776 FDEASIVFEKTKHK-DISLWTALIASYARHGHGEQA 810
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 169/367 (46%), Gaps = 21/367 (5%)
Query: 44 IQDHFAASRL--------LAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLN 95
IQD A ++L L G L A + F ++ + W +I A +
Sbjct: 32 IQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGK 91
Query: 96 PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC 155
++ L+ M G APN TF +L C L +QIH V +S L+ + V N
Sbjct: 92 FSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANS 151
Query: 156 LVRCYSVSSDLNNAR-QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
L+ YS ++R Q F ++ R + WT MI Y+Q + + ++ LF +ML+EG P
Sbjct: 152 LLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAP 211
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT--ALVHMYTKNGALAKAKA 272
NSVT S+LS C LE G ++H V E +G ++MY K G L A
Sbjct: 212 NSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQ 271
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
F M R++ +W MI + G +L LFR++ E PN +TFV +LS C
Sbjct: 272 TFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSL 331
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVD-LLG---RCGKVLEAEELIKRMVWKPDVVMW 388
++ GRQI + +E +E + + + LLG RC ++ L RM + D V W
Sbjct: 332 LEQGRQIHALV-----VESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVR-DSVSW 385
Query: 389 GALLAAC 395
++ AC
Sbjct: 386 STIIMAC 392
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 204/449 (45%), Gaps = 48/449 (10%)
Query: 28 MHQLKQIHAQMIISSRIQDHFA-ASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
+ Q +QIHA +++ S ++ H A+ LL + S + S + F ++ + W +
Sbjct: 127 LEQGRQIHA-LVVESSLESHVVVANSLLGMYSRCRSWEDSR-MQTFARMKRRDVVSWTVM 184
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I A + +I L+ M G APN TF +L C L +QIH V +S L
Sbjct: 185 IGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSL 244
Query: 147 D--LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
+ LD+ V+N + Y L+ A Q F ++ R + WT MI Y+Q + + +L LF
Sbjct: 245 ESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLF 304
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+ML+EG PNSVT S+LS C LE G ++H V E ++ +L+ MY++
Sbjct: 305 REMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRC 364
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASH-GHAEEALDLFRKLEKEQIVPNDITFVGV 323
+ +++LFD M R+ +W+ +I + H +AL L+R + E ++P + V
Sbjct: 365 RSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMV 424
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI------K 377
L AC + G+ + + G+E + +V++ +CG V EA ++
Sbjct: 425 LEACGSLAELKGGKLVHAHVIE-SGLEGDLVGIS-LVNMYAKCGTVGEARKVFDRINNRS 482
Query: 378 RMVW---------------------------KPDVVMWGALLAACKNHGNIE----VAER 406
R++W PD + + +L AC N ++E + R
Sbjct: 483 RILWNSMITAYQEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTR 542
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAEAESM 435
+V A + V L NMYA+ S+
Sbjct: 543 IVDSGFAADVR---VATALFNMYAKCGSL 568
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 162/334 (48%), Gaps = 15/334 (4%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M R G P++ +L AC+ + +L K I ++ + L+LD+ V N + Y
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L+ A Q F ++ R + WT MI Y+Q + + +L LF +ML+EG PNSVT S+LS
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK-ALFDSMPERNIAT 284
C LE G ++H V E ++ +L+ MY++ + ++ F M R++ +
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVS 180
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
W MI + G ++ LFR++ E PN +TFV +LS C ++ GRQI +
Sbjct: 181 WTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALV- 239
Query: 345 RVYGIEPKIEHY------GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+E +E + +++ +CG + A + RM + DVV W ++ A
Sbjct: 240 ----VESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMK-RRDVVSWTVMIGAYSQD 294
Query: 399 GNIEVAERVVKEII--ALEPNNHGVYVVLSNMYA 430
G ++ ++ +E++ PN+ +LS A
Sbjct: 295 GKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEA 328
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 244/460 (53%), Gaps = 46/460 (10%)
Query: 63 GDLSYATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
G + A R+FN ++ M W+ ++ + ++A+ L++ M+ +G A ++
Sbjct: 216 GCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVS 275
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE----- 175
L ACS V ++ + +H K G++ + + N L+ YS ++ +AR++FD+
Sbjct: 276 ALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELL 335
Query: 176 ---------------------------IRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ + + W+ MISGYAQ +EAL LF +M
Sbjct: 336 DLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQ 395
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+ G P+ L S +SAC L+LG+ +H ++ ++ IL T L+ MY K G +
Sbjct: 396 LHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVE 455
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A +F +M E+ ++TWNA+I GLA +G E++L++F ++K VPN+ITF+GVL AC
Sbjct: 456 NALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACR 515
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G ++ GR F SM + IE I+HYGCMVDLLGR G + EAEELI M PDV W
Sbjct: 516 HMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATW 575
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLF 448
GALL AC+ H + E+ ER+ +++I L+P++ G +V+LSN+YA + LEI +
Sbjct: 576 GALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGI---- 631
Query: 449 AGLASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIP 488
+ Q+ ++P ++ T L G+ T P
Sbjct: 632 --------MAQHGVVKTPGCSMIEANGTVHEFLAGDKTHP 663
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 192/395 (48%), Gaps = 40/395 (10%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATRL 71
+ + L L CK KQ+ +Q I++ I D +AASRL+ F + S++ Y+ R+
Sbjct: 1 MKVSTLDSLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRI 60
Query: 72 FNSIQSPNHFMWNTLIRAQASSLN-PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
FN +++PN F WNT++RA N P +A+ Y + P+ +T+ +L+ C+ S
Sbjct: 61 FNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVS 120
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
+Q+H H SG D D++V N L+ Y+V + +AR+VF+E L W T+++G
Sbjct: 121 EFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAG 180
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
Y Q+ EA +F+ M E N++ S+++ + GC+E + +F +RG E
Sbjct: 181 YVQAGEVEEAERVFEGMP----ERNTIASNSMIALFGRKGCVEKARR--IFNGVRGRERD 234
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+ +A+V Y +N EEAL LF +++
Sbjct: 235 MVSWSAMVSCYEQNEM-------------------------------GEEALVLFVEMKG 263
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
+ +++ V LSAC +++GR + G +V G+E + ++ L CG+++
Sbjct: 264 SGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKV-GVEDYVSLKNALIHLYSSCGEIV 322
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
+A + D++ W ++++ G+I+ AE
Sbjct: 323 DARRIFDDGGELLDLISWNSMISGYLRCGSIQDAE 357
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 172/407 (42%), Gaps = 81/407 (19%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA-- 89
+Q+HA + S D + + L+ A+ G + A R+F + WNTL+
Sbjct: 125 RQLHAHAVSSGFDGDVYVRNTLMNLYAVC--GSVGSARRVFEESPVLDLVSWNTLLAGYV 182
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
QA + + +F M R T A N F K C
Sbjct: 183 QAGEVEEAERVFEGMPERNT-IASNSMIALFGRKGC------------------------ 217
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV--WTTMISGYAQSFRANEALMLFDQM 207
+ AR++F+ +R R ++ W+ M+S Y Q+ EAL+LF +M
Sbjct: 218 ----------------VEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEM 261
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
G + V + S LSAC++ +E+G VH G E L AL+H+Y+ G +
Sbjct: 262 KGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEI 321
Query: 268 AKAKALFD--------------------------------SMPERNIATWNAMISGLASH 295
A+ +FD SMPE+++ +W+AMISG A H
Sbjct: 322 VDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQH 381
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
EAL LF++++ + P++ V +SAC H +D+G+ I + R ++ +
Sbjct: 382 ECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISR-NKLQVNVIL 440
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
++D+ +CG V A E+ M K V W A++ +G++E
Sbjct: 441 STTLIDMYMKCGCVENALEVFYAMEEK-GVSTWNAVILGLAMNGSVE 486
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 234/427 (54%), Gaps = 4/427 (0%)
Query: 8 LRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
+R + + L+ A K + L+ IH+ I D ++ +A A + G+
Sbjct: 151 IRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIA--AYAKCGEFGL 208
Query: 68 ATRLFNSIQS--PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A +F+ I WN++I A KA+ + M GF + T +L +C
Sbjct: 209 AETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSC 268
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
L K IH H + G D D+ V+N L+ YS D+ +AR +FD + +T WT
Sbjct: 269 VQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWT 328
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
MI+GYA+ +EA+ LF M G +P+ VT+ S++S C Q+G LELG+ + +
Sbjct: 329 AMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATAN 388
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G + ++ AL+ +Y K G++ A+ LF +MPE+++ +W +I+G A +G +EAL LF
Sbjct: 389 GLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLF 448
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
++ + + PN ITF+ VL AC HAGF++ G + F M +VY I P ++HY CM DLLGR
Sbjct: 449 FQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGR 508
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G++ EA E I+ M +KPDV +W LL+ACK H N+ + E V + LEP YV +
Sbjct: 509 KGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQM 568
Query: 426 SNMYAEA 432
+N+YA A
Sbjct: 569 ANIYASA 575
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 203/430 (47%), Gaps = 14/430 (3%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLK--QIHAQMIISSRIQ-DHFAASRLLAFCAL 59
+K + L L P + A C + LK QI ++ SR Q D F + ++
Sbjct: 45 MKQNGLEPNNLTFPSV---AKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVK 101
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S L +A LF+ + + WN++I A D+ + L+ M G + T
Sbjct: 102 CS--QLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVI 159
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN- 178
+ + +++ L + IH+ K G+D D+ V N + Y+ + A VFD I
Sbjct: 160 GLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKG 219
Query: 179 -RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+T W +MI+GYA + ++A+ F +ML GF + T+ S+LS+C Q L G+
Sbjct: 220 LKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKL 279
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H G + + L+ MY+K G + A+ LFD+M + +W AMI+G A G
Sbjct: 280 IHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGD 339
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EA+ LF +E P+ +T + ++S C G +++G+ I + G++ +
Sbjct: 340 LDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWI-DTYATANGLKDNLMVCN 398
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALE 415
++D+ +CG + A EL M K +V W L+A C +G + A + +++ L+
Sbjct: 399 ALIDVYAKCGSMDNARELFYTMPEK-SLVSWTTLIAGCALNGEFKEALGLFFQMVELGLK 457
Query: 416 PNNHGVYVVL 425
PN+ VL
Sbjct: 458 PNHITFLAVL 467
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 156/340 (45%), Gaps = 11/340 (3%)
Query: 74 SIQSPNHF-------MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
+ QS N F WN+ I + KA+ L+ M++ G PN TF V KACS
Sbjct: 6 ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
+ +L + +HTHV KS DL V +V Y S L A +F + R + W +
Sbjct: 66 KLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNS 125
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MI G+AQ + + LF +M +EG +SVT+ + + L++ E +H F G
Sbjct: 126 MILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPE--RNIATWNAMISGLASHGHAEEALDL 304
+ + + Y K G A+ +FD + + + +WN+MI+G A +A+
Sbjct: 186 IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGF 245
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F+K+ + T + +LS+C + G+ I +V G + I+ ++ +
Sbjct: 246 FKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQV-GCDSDIQVINTLISMYS 304
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+CG + A L M+ K V W A++A G+++ A
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVS-WTAMIAGYAEKGDLDEA 343
>gi|10086462|gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
Length = 539
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 237/421 (56%), Gaps = 14/421 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+ + KC S Q+KQ+ + + + Q F SRLL CA+S GDLS+A ++F I
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP------NQHTFTFVLKACSNVRSL 131
P WN +IR A S +P A Y +M + + + T +F LKAC+
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCS 125
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ Q+H +++ GL D + L+ YS + DL +A ++FDE+ R + W +I+G
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGL 185
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM-G 250
RA+EA+ L+ +M EG + VT+ + L AC+ G ++ GE + G+
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI-----FHGYSNDN 240
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLE 309
I+ A + MY+K G + KA +F+ ++++ TWN MI+G A HG A AL++F KLE
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
I P+D++++ L+AC HAG ++ G +F +M G+E ++HYGC+VDLL R G++
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRL 359
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EA ++I M PD V+W +LL A + + ++E+AE +EI + NN G +V+LSN+Y
Sbjct: 360 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 419
Query: 430 A 430
A
Sbjct: 420 A 420
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 237/401 (59%), Gaps = 3/401 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
LK++H + + + A+ +A + + G LSYA R+F+ I+S WN LI
Sbjct: 769 LKELHCYSLKQEFVYNELVANAFVA--SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 826
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A S +P ++ ++ M+ +G P+ T +L ACS ++SL K++H + ++ L+ DL
Sbjct: 827 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 886
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V ++ Y +L + +FD + +++L W T+I+GY Q+ + AL +F QM++
Sbjct: 887 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 946
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G + +++ V AC+ L LG + H + E A + +L+ MY KNG++ ++
Sbjct: 947 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 1006
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F+ + E++ A+WNAMI G HG A+EA+ LF ++++ P+D+TF+GVL+AC H+
Sbjct: 1007 SKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 1066
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI-KRMVWKPDVVMWG 389
G I G + MK +G++P ++HY C++D+LGR G++ +A ++ + M + DV +W
Sbjct: 1067 GLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 1126
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+LL++C+ H N+E+ E+V ++ LEP YV+LSN+YA
Sbjct: 1127 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 1167
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 214/430 (49%), Gaps = 19/430 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
K K + ++IH + S+R++ D +R++ A+ S D S +F++++S N F
Sbjct: 451 KRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF--VFDALRSKNLFQ 508
Query: 83 WNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WN +I + + + D+ + ++ M T P+ T+ V+KAC+ + + +H V
Sbjct: 509 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 568
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K+GL D+ V N LV Y + +A Q+FD + R L W +MI ++ + + E+
Sbjct: 569 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 628
Query: 202 MLFDQMLME----GFEPNSVTLASVLSACAQSGCLELGEKVHVF-VKMRGFEMGAILGTA 256
+L +M+ E F P+ TL +VL CA+ + LG+ VH + VK+R + +L A
Sbjct: 629 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR-LDKELVLNNA 687
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EKEQIV 314
L+ MY+K G + A+ +F +N+ +WN M+ G ++ G D+ R++ E +
Sbjct: 688 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 747
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
+++T + + C H F+ +++ S+K+ + + + V +CG + A+
Sbjct: 748 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQ 805
Query: 374 ELIKRMVWKPDVVMWGALLA--ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+ + K V W AL+ A N + + + +I L P++ V +LS ++
Sbjct: 806 RVFHGIRSKT-VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC-SK 863
Query: 432 AESMKMQLEI 441
+S+++ E+
Sbjct: 864 LKSLRLGKEV 873
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 170/358 (47%), Gaps = 12/358 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHT 117
S G ++ A +F + N WNT++ ++ + + M G ++ T
Sbjct: 693 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 752
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ C + L K++H + K + V N V Y+ L+ A++VF IR
Sbjct: 753 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 812
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
++T+N W +I G+AQS +L QM + G P+S T+ S+LSAC++ L LG++
Sbjct: 813 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 872
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH F+ E + +++ +Y G L +ALFD+M ++++ +WN +I+G +G
Sbjct: 873 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 932
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH-- 355
+ AL +FR++ I I+ + V AC + +GR+ Y ++ +E
Sbjct: 933 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDA 987
Query: 356 -YGC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
C ++D+ + G + ++ ++ + K W A++ HG + A ++ +E+
Sbjct: 988 FIACSLIDMYAKNGSITQSSKVFNGLKEK-STASWNAMIMGYGIHGLAKEAIKLFEEM 1044
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 154/328 (46%), Gaps = 25/328 (7%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ +L+A + + ++IH VS S L D + ++ Y++ +++R VF
Sbjct: 439 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 498
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCL 232
D +R++ L W +IS Y+++ +E L F +M+ P+ T V+ ACA +
Sbjct: 499 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 558
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+G VH V G +G ALV Y +G + A LFD MPERN+ +WN+MI
Sbjct: 559 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 618
Query: 293 ASHGHAEEALDLFRKLEKEQ----IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
+ +G +EE+ L ++ +E +P+ T V VL C I +G+ + G ++
Sbjct: 619 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR- 677
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
++ ++ ++D+ +CG + A ++I +M +VV W ++
Sbjct: 678 LDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG-------------- 722
Query: 409 KEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ E + HG + VL M A E +K
Sbjct: 723 ---FSAEGDTHGTFDVLRQMLAGGEDVK 747
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 113/236 (47%), Gaps = 12/236 (5%)
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV----KMRGFE 248
+SFR + + D+ + F L +L A + +E+G K+H V ++R +
Sbjct: 416 KSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDD 475
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF-RK 307
+L T ++ MY G+ ++ +FD++ +N+ WNA+IS + + +E L+ F
Sbjct: 476 ---VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 532
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ ++P+ T+ V+ AC + +G + G + + G+ + +V G G
Sbjct: 533 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNALVSFYGTHG 591
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
V +A +L M + ++V W +++ ++G E + ++ E+ +E N G ++
Sbjct: 592 FVTDALQLFDIMPER-NLVSWNSMIRVFSDNGFSEESFLLLGEM--MEENGDGAFM 644
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 206/339 (60%), Gaps = 20/339 (5%)
Query: 99 AIFLYMNM-----RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+IFL M + T PNQ +LKAC ++ + +HT + K+ + D +++
Sbjct: 349 SIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 408
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
+ L+ YS + A +VFD I N + W T+I+G F QML +GF
Sbjct: 409 SALIYMYSKCGHVEKACRVFDWIPN--VVSWNTLIAG-------------FSQMLDQGFC 453
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P+SVT++S+L AC L G+++H + + G E + +ALV MY K G +++AK L
Sbjct: 454 PSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKIL 513
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F MPERN TWN++I G A+HG+ EA++LF ++E+ + +TF VL+AC HAG +
Sbjct: 514 FYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMV 573
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
++G +F M+ Y IEP++EHY CMVDLLGR GK+ EA +LIK M +PD +WGALL
Sbjct: 574 ELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLG 633
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
AC+NHGNIE+AE + + LEP + G ++LSN+YA+A
Sbjct: 634 ACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADA 672
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 115/218 (52%), Gaps = 1/218 (0%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA 169
GF Q+ F+ L C + ++ H V K GL D V L+ Y+ ++++A
Sbjct: 109 GFPHRQYVFS-ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
+V+D++ + +IS YA++ +A +F Q+ G PN T +++L+ C
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
++ G+++H V + +G AL+ +Y+K G + +A+ +F+++ +RNI +W A I
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASI 287
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+G HG ++AL F + + I PN+ TF VL++C
Sbjct: 288 NGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC 325
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 168/398 (42%), Gaps = 52/398 (13%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D F + L+ A G++ A R+++ + S + N LI A A + +A ++M
Sbjct: 147 DEFVCTSLIDMYA--KCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQ 204
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
+ G PN +T++ +L C + ++ KQ+H HV K + V N L+ YS
Sbjct: 205 IGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGM 264
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
+ A VF+ + R + WT I+G+ Q +AL F M G EPN T + VL++
Sbjct: 265 MEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLAS 324
Query: 226 CAQSGCLELGEKVH---------------VFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
C GC +LG+ + +F+ + E G + + + L
Sbjct: 325 C---GC-DLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKAC 380
Query: 271 KALFDSMPERNIAT-------------WNAMISGLASHGHAEEALDL------------- 304
L D N+ T +A+I + GH E+A +
Sbjct: 381 GHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIPNVVSWNTL 440
Query: 305 ---FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
F ++ + P+ +T +L AC + + G++I G V G+E + +VD
Sbjct: 441 IAGFSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHG-YAMVIGVEKDVYVRSALVD 499
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ +CG + EA+ L M+ + + V W +L+ NHG
Sbjct: 500 MYAKCGYISEAKILF-YMMPERNTVTWNSLIFGYANHG 536
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 9/221 (4%)
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
GF P+ + S LS C + GC+ELG + H FV G + T+L+ MY K G + A
Sbjct: 109 GF-PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
++D M + AT N +IS A +G +A +F ++ PN T+ +L+ C
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227
Query: 331 GFIDVGRQIFGS-MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
I G+Q+ +K Y E + + ++ L +CG ++E E++ + + +++ W
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGN--ALLTLYSKCG-MMEEAEIVFENLGQRNIISWT 284
Query: 390 ALLAACKNHGNIEVAER---VVKEIIALEPNNHGVYVVLSN 427
A + HG+ + A + +++E +EPN +VL++
Sbjct: 285 ASINGFYQHGDFKKALKQFSMMRE-SGIEPNEFTFSIVLAS 324
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 37/206 (17%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH ++ +D + S L+ A G +S A LF + N WN+LI A
Sbjct: 476 KEIHGYAMVIGVEKDVYVRSALVDMYA--KCGYISEAKILFYMMPERNTVTWNSLIFGYA 533
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ ++AI L+ M + + TFT VL ACS H + + G L
Sbjct: 534 NHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS-----------HAGMVELGESL--- 579
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIR-NRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
R++ ++ R L + M+ ++ + +EA L M +
Sbjct: 580 -----------------FRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPV- 621
Query: 211 GFEPNSVTLASVLSACAQSGCLELGE 236
EP+ ++L AC G +EL E
Sbjct: 622 --EPDKFVWGALLGACRNHGNIELAE 645
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/434 (36%), Positives = 234/434 (53%), Gaps = 9/434 (2%)
Query: 6 SSLRQPPLPIPPLSL---LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
S +R+ L + +L + C + + Q+H+ + +SS + + + L +
Sbjct: 129 SGMREMGLDMDXFTLSAVITACCDDVGLIGQLHS-VAVSSGFDSYVSVNNAL-LTYYGKN 186
Query: 63 GDLSYATRLFNSIQS-PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
GDL A R+F + + WN++I A KA+ L+ M R G + T V
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS-VSSDLNNARQVFDEIRNRT 180
L A + + L+ Q H + K+G + HV + L+ YS +++ R+VF+EI
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306
Query: 181 LNVWTTMISGYAQSFR-ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L +W TM+SGY+Q+ +AL F QM G+ PN + V+SAC+ G+++H
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIH 366
Query: 240 VFVKMRGFEMGAI-LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
I + AL+ MY+K G L A+ LFD M E N + N+MI+G A HG
Sbjct: 367 SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
E+L LF+ + + QI P ITF+ VLSAC H G ++ G F MK + IEP+ EHY C
Sbjct: 427 MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
M+DLLGR GK+ EAE LI RM + P + W +LL AC+ HGNIE+A + +++ LEP+N
Sbjct: 487 MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546
Query: 419 HGVYVVLSNMYAEA 432
YVVLSNMYA A
Sbjct: 547 AAPYVVLSNMYASA 560
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 168/337 (49%), Gaps = 10/337 (2%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +LF+ I P+ +NTLI A A A+ L+ MR G + T + V+ AC +
Sbjct: 93 AHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCD 152
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF---DEIRNRTLNVW 184
+ Q+H+ SG D + V N L+ Y + DL++A++VF IR+ W
Sbjct: 153 --DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEV--SW 208
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+MI Y Q ++AL LF +M+ G + TLASVL+A L G + H +
Sbjct: 209 NSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIK 268
Query: 245 RGFEMGAILGTALVHMYTK-NGALAKAKALFDSMPERNIATWNAMISGLASHGH-AEEAL 302
GF + +G+ L+ +Y+K G ++ + +F+ + E ++ WN M+SG + + E+AL
Sbjct: 269 TGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDAL 328
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ FR+++ PND +FV V+SAC + G+QI + +I ++ +
Sbjct: 329 ECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAM 388
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+CG + +A L RM + + V +++A HG
Sbjct: 389 YSKCGNLQDARRLFDRMA-EHNTVSLNSMIAGYAQHG 424
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 11/286 (3%)
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D ++ N ++ Y+ S A Q+FD+I L + T+IS YA AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELG--EKVHVFVKMRGFEMGAILGTALVHMYTKN 264
M G + + TL++V++AC C ++G ++H GF+ + AL+ Y KN
Sbjct: 131 MREMGLDMDXFTLSAVITAC----CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 265 GALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G L AK +F M R+ +WN+MI H +AL LF+++ + + + T V
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L+A + G Q G + + G ++DL +CG + + + +P
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305
Query: 384 DVVMWGALLAA-CKNHGNIEVAERVVKEI--IALEPNNHGVYVVLS 426
D+V+W +++ +N +E A +++ I PN+ V+S
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVIS 351
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/434 (36%), Positives = 234/434 (53%), Gaps = 9/434 (2%)
Query: 6 SSLRQPPLPIPPLSL---LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
S +R+ L + +L + C + + Q+H+ + +SS + + + L +
Sbjct: 129 SGMREMGLDMDGFTLSAVITACCDDVGLIGQLHS-VAVSSGFDSYVSVNNAL-LTYYGKN 186
Query: 63 GDLSYATRLFNSIQS-PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
GDL A R+F + + WN++I A KA+ L+ M R G + T V
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS-VSSDLNNARQVFDEIRNRT 180
L A + + L+ Q H + K+G + HV + L+ YS +++ R+VF+EI
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPD 306
Query: 181 LNVWTTMISGYAQSFR-ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L +W TM+SGY+Q+ +AL F QM G+ PN + V+SAC+ G+++H
Sbjct: 307 LVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIH 366
Query: 240 VFVKMRGFEMGAI-LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
I + AL+ MY+K G L A+ LFD M E N + N+MI+G A HG
Sbjct: 367 SLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIE 426
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
E+L LF+ + + QI P ITF+ VLSAC H G ++ G F MK + IEP+ EHY C
Sbjct: 427 MESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
M+DLLGR GK+ EAE LI RM + P + W +LL AC+ HGNIE+A + +++ LEP+N
Sbjct: 487 MIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546
Query: 419 HGVYVVLSNMYAEA 432
YVVLSNMYA A
Sbjct: 547 AAPYVVLSNMYASA 560
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 217/491 (44%), Gaps = 56/491 (11%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +LF+ I P+ +NTLI A A A+ L+ MR G + T + V+ AC +
Sbjct: 93 AHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD 152
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF---DEIRNRTLNVW 184
+ Q+H+ SG D + V N L+ Y + DL++A++VF IR+ W
Sbjct: 153 --DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEV--SW 208
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+MI Y Q ++AL LF +M+ G + TLASVL+A L G + H +
Sbjct: 209 NSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIK 268
Query: 245 RGFEMGAILGTALVHMYTK-NGALAKAKALFDSMPERNIATWNAMISGLASHGH-AEEAL 302
GF + +G+ L+ +Y+K G ++ + +F+ + E ++ WN M+SG + + E+AL
Sbjct: 269 TGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDAL 328
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ FR+++ PND +FV V+SAC + G+QI + +I ++ +
Sbjct: 329 ECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAM 388
Query: 363 LGRCGKVLEAEELIKRMV----------------------------W------KPDVVMW 388
+CG + +A L RM W P + +
Sbjct: 389 YSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITF 448
Query: 389 GALLAACKNHGNIEVAE---RVVKEIIALEPNNHGVYVVL-----SNMYAEAESMKMQLE 440
++L+AC + G +E ++KE +EP ++ + +EAE++ ++
Sbjct: 449 ISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMP 508
Query: 441 ILLVQVLFAGLASAADILQNPDFESPPTN----LTPNRSTPFVLLNGNNTIPG-WTFEGT 495
+ +A L A N + N L P+ + P+V+L+ G W T
Sbjct: 509 FNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVAT 568
Query: 496 VQYVTASQTIR 506
V+ + ++
Sbjct: 569 VRKFMRDRGVK 579
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%), Gaps = 11/286 (3%)
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D ++ N ++ Y+ S A Q+FD+I L + T+IS YA AL LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELG--EKVHVFVKMRGFEMGAILGTALVHMYTKN 264
M G + + TL++V++AC C ++G ++H GF+ + AL+ Y KN
Sbjct: 131 MREMGLDMDGFTLSAVITAC----CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186
Query: 265 GALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G L AK +F M R+ +WN+MI H +AL LF+++ + + + T V
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L+A + G Q G + + G ++DL +CG + + + +P
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305
Query: 384 DVVMWGALLAA-CKNHGNIEVAERVVKEI--IALEPNNHGVYVVLS 426
D+V+W +++ +N +E A +++ I PN+ V+S
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVIS 351
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 230/415 (55%), Gaps = 7/415 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH +++ S D F +S L+ G L A +F IQ N WN++I +
Sbjct: 419 KEIHMELVRSGFALDGFVSSALVDM--YGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYS 476
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ I L+ M G P T + +L ACS +L K IH ++ ++ ++ D+
Sbjct: 477 LKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 536
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + L+ Y ++ +A VF + + W MISGY + EAL++F M G
Sbjct: 537 VNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG 596
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+++T SVL AC+Q LE G+++H F+ E+ ++ AL+ MY K GA+ +A
Sbjct: 597 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL 656
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +PER+ +W +MI+ SHG A EAL LF K+++ P+ +TF+ +LSAC HAG
Sbjct: 657 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 716
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV-WKPDVVMWGA 390
+D G F M YG +P +EHY C++DLLGR G++ EA E+++R + DV +
Sbjct: 717 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 776
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA----ESMKMQLEI 441
L +AC H +++ E++ + +I +P++ Y++LSNMYA E K++L+I
Sbjct: 777 LFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKI 831
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 192/373 (51%), Gaps = 12/373 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H +I S D S + A A +LF+ + + WN +I
Sbjct: 318 KMVHTHVIKSGFAMDVVVMSSAVGMYA--KCNVFEDAIKLFDEMPERDVASWNNVISCYY 375
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
P+KA+ L+ M+ +GF P+ T T V+ +C+ + L K+IH + +SG LD
Sbjct: 376 QDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGF 435
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + LV Y L A++VF++I+ + + W +MI+GY+ + + LF +M EG
Sbjct: 436 VSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEG 495
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P TL+S+L AC++S L+LG+ +H ++ E + ++L+ +Y K G + A+
Sbjct: 496 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 555
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F +MP+ N+ +WN MISG G EAL +F + K + P+ ITF VL AC
Sbjct: 556 NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 615
Query: 332 FIDVGRQIFGSMKRVYGIEPKIE----HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
++ G++I + IE K+E G ++D+ +CG V EA + ++ + D V
Sbjct: 616 VLEKGKEIHN-----FIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPER-DFVS 669
Query: 388 WGALLAACKNHGN 400
W +++AA +HG
Sbjct: 670 WTSMIAAYGSHGQ 682
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 205/369 (55%), Gaps = 14/369 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASR----LLAFCALSSSGDLSYATRLFNSIQSP-NHFMWNTL 86
K IH Q I+S +Q++ + L C L S L +F +I++P + +WN L
Sbjct: 215 KLIH-QKIVSLGLQNNITLCKSLINLYFSCHLFQSAKL-----VFQTIENPLDITLWNGL 268
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGF-APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+ A + + + ++ + + P+ T+ VLKACS + + K +HTHV KSG
Sbjct: 269 MAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSG 328
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+D+ V++ V Y+ + +A ++FDE+ R + W +IS Y Q + +AL LF+
Sbjct: 329 FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFE 388
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M + GF+P+SVTL +V+S+CA+ LE G+++H+ + GF + + +ALV MY K G
Sbjct: 389 EMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCG 448
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L AK +F+ + +N+ +WN+MI+G + G ++ ++LFR++++E I P T +L
Sbjct: 449 CLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILM 508
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC + + +G+ I G + R +E I ++DL +CG + AE + + M K +V
Sbjct: 509 ACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNV 566
Query: 386 VMWGALLAA 394
V W +++
Sbjct: 567 VSWNVMISG 575
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 210/374 (56%), Gaps = 1/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S+ D ++F S+ N W +I + + DK L M G P+ T
Sbjct: 564 SNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVT 623
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L A + SL K +H + ++G++ L V N L+ Y ++ AR +FD + N+
Sbjct: 624 SALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNK 683
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W T+I GY+++ NE+ LF ML++ F PN+VT+ +L A A LE G ++H
Sbjct: 684 DVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIH 742
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ RGF + ALV MY K GAL A+ LFD + ++N+ +W MI+G HG +
Sbjct: 743 AYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGK 802
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
A+ LF ++ I P+ +F +L ACCH+G GR+ F +M++ Y IEPK++HY C+
Sbjct: 803 HAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCI 862
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R G + EA E I+ M +PD +W +LL C+ H N+++AE+V ++ LEP N
Sbjct: 863 VDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENT 922
Query: 420 GVYVVLSNMYAEAE 433
G YV+L+N+YAEAE
Sbjct: 923 GYYVLLANIYAEAE 936
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 28/405 (6%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS--SSGDLSYATRLFNSI--QSPNHF 81
+S+ K+ HA + SS S L L+ GDL A +F+ + Q+ +
Sbjct: 111 RSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVR 170
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
+W +L+ A A + + +A+ L+ M+ G +P+ H + VLK S++ SL + IH +
Sbjct: 171 VWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLL 230
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K GL V N L+ YS + +A +VFD + R W +MI G + A+
Sbjct: 231 EKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAV 290
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG----------A 251
LF +M +G E +SVT+ SVL ACA G +G+ VH + G G A
Sbjct: 291 DLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDA 350
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASHGHAEEALDLFRKLEK 310
LG+ LV MY K G +A A+ +FD+M + N+ WN ++ G A G EE+L LF ++ +
Sbjct: 351 ALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHE 410
Query: 311 EQIVPNDITFVGVLS-----ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
I P++ +L +C G + G + K +G + + + ++ +
Sbjct: 411 LGIAPDEHAISCLLKCITCLSCARDGLVAHGYIV----KLGFGAQCAVCN--ALISFYAK 464
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAERVVK 409
+ +A + RM + D + W ++++ C ++G N E E ++
Sbjct: 465 SNMIGDAVLVFNRMP-RQDTISWNSVISGCSSNGLNSEAIELFIR 508
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 158/332 (47%), Gaps = 3/332 (0%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +FN + + WN++I +S+ +AI L++ M G + T VL AC+
Sbjct: 471 AVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQ 530
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
R + +H + K+GL + + N L+ YS SD + Q+F + + + WT M
Sbjct: 531 SRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAM 590
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I+ Y ++ ++ L +M+++G P+ + S L A A L+ G+ VH + G
Sbjct: 591 ITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGM 650
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
E + AL+ MY K + +A+ +FD + +++ +WN +I G + + E+ LF
Sbjct: 651 EKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSD 710
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ Q PN +T +L A ++ GR+I R +E +VD+ +CG
Sbjct: 711 M-LLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYAS-NALVDMYVKCG 768
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+L A L R+ K +++ W ++A HG
Sbjct: 769 ALLVARVLFDRLT-KKNLISWTIMIAGYGMHG 799
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 163/336 (48%), Gaps = 9/336 (2%)
Query: 63 GDLSYATRLFNSIQSP-NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
GD++ A R+F+++ S N +WN ++ A ++++ L++ M G AP++H + +
Sbjct: 364 GDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCL 423
Query: 122 LKACSNVRSLNCCKQ---IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
LK + L+C + H ++ K G V N L+ Y+ S+ + +A VF+ +
Sbjct: 424 LKC---ITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPR 480
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ W ++ISG + + +EA+ LF +M +G E +SVTL SVL ACAQS G V
Sbjct: 481 QDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVV 540
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + G L AL+ MY+ +F SM ++N+ +W AMI+ G
Sbjct: 541 HGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLF 600
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
++ L +++ + I P+ L A + G+ + G R G+E +
Sbjct: 601 DKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIR-NGMEKLLPVANA 659
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++++ +C V EA + R+ K DV+ W L+
Sbjct: 660 LMEMYVKCRNVEEARLIFDRVTNK-DVISWNTLIGG 694
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 159/331 (48%), Gaps = 25/331 (7%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKS--------GLDLDLHVVNCLVRCYSVSSDLN 167
++ V++ C RSL K+ H + S G L +V ++C DL
Sbjct: 98 RSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKC----GDLG 153
Query: 168 NARQVFDEI--RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
AR VFD + + + VWT+++S YA++ EA+ LF QM G P++ ++ VL
Sbjct: 154 EARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKC 213
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
+ G L GE +H ++ G + AL+ +Y++ G + A +FDSM R+ +W
Sbjct: 214 VSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISW 273
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMK 344
N+MI G S+G A+DLF K+ + + +T + VL AC G+ +G+ + G S+K
Sbjct: 274 NSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVK 333
Query: 345 R--VYG---IEPKIEHYGC---MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
++G ++ I+ +V + +CG + A + M K +V +W ++
Sbjct: 334 SGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYA 393
Query: 397 NHGNIEVAERVVKEI--IALEPNNHGVYVVL 425
G E + + ++ + + P+ H + +L
Sbjct: 394 KVGEFEESLSLFVQMHELGIAPDEHAISCLL 424
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 229/435 (52%), Gaps = 32/435 (7%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
++ +IH + R+++ S +L A R+F+ + N W+ +I
Sbjct: 231 RMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIAR 290
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
S P++++ L+ M + GF PN F+ +L A ++V +L IH HV+K G + D
Sbjct: 291 YCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKD 350
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD---- 205
+ V + L+ Y + + R +FD I + + W M+ GY+ + EA LF+
Sbjct: 351 VFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPV 410
Query: 206 ---------------------------QMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+M++ G PN T +S+L ACA + L+ G+ +
Sbjct: 411 RNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNL 470
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + G + +GTAL MY K+G + +K +F+ MP++N +W AMI GLA G A
Sbjct: 471 HGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLA 530
Query: 299 EEALDLFRKLEK-EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EE+L LF ++EK I PN++ F+ VL AC H+G +D G F SM+ VYG++PK H+
Sbjct: 531 EESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFT 590
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
C+VD+L R G++ EAEE I M ++P+ W ALL+ CK + N E+AERV ++ +
Sbjct: 591 CVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEK 650
Query: 418 NHGVYVVLSNMYAEA 432
N YV+LSN+YA A
Sbjct: 651 NCAGYVLLSNIYASA 665
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 193/451 (42%), Gaps = 98/451 (21%)
Query: 57 CALSSS---GDLSYATRLFNSIQSPNHFMWNTLI-------RAQAS----SLNPDK---- 98
C +S++ G+L A +LF+ + N W LI R + S NP +
Sbjct: 92 CMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVS 151
Query: 99 ----------------AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
A+ L++ + + PN+ TFT V++AC+N+ + +
Sbjct: 152 WTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIV 211
Query: 143 KSGLDLDLHVVNCLVR-------------------------------CYSVSSDLNNARQ 171
K+G + DL V N L+ Y +L AR+
Sbjct: 212 KTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARR 271
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
+FDE+ R W+ MI+ Y QS E+L LF +M+ EGF+PN +S+LSA A
Sbjct: 272 IFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEA 331
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L+ G +H V GFE + ++L+ MY K G + LFD++ E+N+ +WNAM+ G
Sbjct: 332 LQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGG 391
Query: 292 LASHGHAEEALDLFR----------------KLEKEQI---------------VPNDITF 320
+ +GH EEA LF L+ EQ +PN TF
Sbjct: 392 YSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTF 451
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+L AC +D G+ + G + ++ GI+ + D+ + G + ++++ RM
Sbjct: 452 SSLLCACASTASLDKGKNLHGKIVKL-GIQCDTYVGTALTDMYAKSGDIESSKKVFNRMP 510
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
K + V W A++ G E + + +E+
Sbjct: 511 -KKNEVSWTAMIQGLAESGLAEESLTLFEEM 540
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 164/369 (44%), Gaps = 74/369 (20%)
Query: 102 LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS 161
L+ ++ +TG + Q+ +L N R QI SK DL V NC++
Sbjct: 43 LHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQI----SKDFDGFDLVVHNCMISANV 98
Query: 162 VSSDLNNARQVFDEI-----------------------------RNRTLNV--WTTMISG 190
+L+ AR++FDE+ RN NV WT ISG
Sbjct: 99 QRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISG 158
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG-------------------- 230
Y Q+ + EA+ LF ++L +PN VT SV+ ACA G
Sbjct: 159 YVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHD 218
Query: 231 ----------CLELGEKVH----VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
CL +GE +H VF +M E + TA++ +Y + L +A+ +FD
Sbjct: 219 LAVSNSLITLCLRMGE-IHLAREVFDRME--EKDVVSWTAILDLYVEMDELGEARRIFDE 275
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
MP+RN +W+AMI+ G+ EE+L LF ++ +E PN F +LSA + G
Sbjct: 276 MPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAG 335
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
I G + ++ G E + ++D+ +CG+ + L ++ K ++V W A++
Sbjct: 336 MNIHGHVTKI-GFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEK-NMVSWNAMVGGYS 393
Query: 397 NHGNIEVAE 405
+G++E A+
Sbjct: 394 LNGHMEEAK 402
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 125/303 (41%), Gaps = 41/303 (13%)
Query: 109 TGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN 168
T F T +LK +N + +H H+ K+G+ + ++ L+ Y
Sbjct: 15 THFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAE 74
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
A Q+ + L V MIS Q +EA LFD+M P +
Sbjct: 75 ADQISKDFDGFDLVVHNCMISANVQRGNLDEARKLFDEM------PQT------------ 116
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
I TAL+ + K G + ++ F+ P +N+ +W A
Sbjct: 117 ---------------------NEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAA 155
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
ISG +G + EA+ LF KL + ++ PN +TF V+ AC + G +G + G + + G
Sbjct: 156 ISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKT-G 214
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
E + ++ L R G++ A E+ RM K DVV W A+L + A R+
Sbjct: 215 YEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEK-DVVSWTAILDLYVEMDELGEARRIF 273
Query: 409 KEI 411
E+
Sbjct: 274 DEM 276
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 212/368 (57%), Gaps = 3/368 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+ A R+F+ + S + W L+ A +A+ L M PN+ T VL
Sbjct: 162 GECGDARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQM---DVVPNEGTLACVL 218
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC + + K +H + DL L V N ++ Y L+ AR+VFD + R +
Sbjct: 219 VACGRLGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVI 278
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT MISG Q ++AL +F++M +P+ V L++VLSAC G LE G VH ++
Sbjct: 279 SWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYI 338
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ +G E +GT+LV MY K G L + ++F MP +N+++WNA+I+G A HGH EAL
Sbjct: 339 ERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREAL 398
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ F ++ + PN+++F+ VL ACCH+G + G Q+F SMK Y + P EHYG +VDL
Sbjct: 399 EHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDL 458
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G + EA + K M +P V WGALL+AC+ H ++ ++++++ + LE + GVY
Sbjct: 459 LGRAGLIHEAYSVTKAMPMRPAVFTWGALLSACQAHRQVDFSQQILRHVHELESSESGVY 518
Query: 423 VVLSNMYA 430
+LSN+YA
Sbjct: 519 ALLSNIYA 526
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 173/355 (48%), Gaps = 17/355 (4%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFA----PNQHTFTFVLKACSNVRSLNCC---- 134
+N LI S P A + + G P+ +T LKAC+ + +
Sbjct: 71 FNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLR 130
Query: 135 --KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+Q+H K G L V N LV Y V + +AR+VFDE+ +R + WT ++S +
Sbjct: 131 EGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFV 190
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ R EAL+L QM PN TLA VL AC + G G+ VH + R ++ I
Sbjct: 191 RGGRFAEALVLVGQM---DVVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKLI 247
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+G A++ MY K L A+ +FD + R++ +W MISGL +AL++F +++K +
Sbjct: 248 VGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSR 307
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ P+ + VLSAC G ++ GR + ++R GIE + +VD+ +CG + +
Sbjct: 308 VKPDKVVLSTVLSACTSLGALESGRWVHEYIER-KGIEWDVHVGTSLVDMYAKCGCLETS 366
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVL 425
+ ++M K ++ W AL+ HG+ A ++A L PN +VL
Sbjct: 367 LSIFRKMPLK-NLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVL 420
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 225/399 (56%), Gaps = 2/399 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H+ ++ D F L+ S G L A +F+ + + +WN++I +
Sbjct: 309 RQLHSALMKMDMEPDSFVGVGLIDM--YSKCGLLQDARMVFDLMPXKDVIVWNSIISGYS 366
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A+ L+ NM + G NQ T + +LK+ + ++ C+Q+HT KSG D +
Sbjct: 367 NCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGY 426
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y L +A +VF+ L +T+MI+ Y+Q EAL ++ +M
Sbjct: 427 VANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRD 486
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P++ +S+ +ACA E G+++HV V G G +LV+MY K G++ A
Sbjct: 487 IKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDAS 546
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ + R I +W+AMI GLA HGH +AL LF ++ K I+PN IT V VLSAC HAG
Sbjct: 547 CIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAG 606
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ R+ FG M++++GI P EHY CMVD+LGR G++ EA L+K M ++ +WGAL
Sbjct: 607 LVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGAL 666
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L A + H NIE+ + ++ LEP G +++L+N+YA
Sbjct: 667 LGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYA 705
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 189/396 (47%), Gaps = 6/396 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
++H +I D F+A+ LL A SG A +F I P+ WN +I
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYA--KSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
D A+ L M AP+ T + LKAC+ + + +Q+H+ + K ++ D V
Sbjct: 267 HEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFV 326
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
L+ YS L +AR VFD + + + VW ++ISGY+ EA+ LF M EG
Sbjct: 327 GVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGL 386
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
E N TL+++L + A S E+VH G++ + +L+ Y K L A
Sbjct: 387 EFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAK 446
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F+ P ++ + +MI+ + +G EEAL ++ +++ I P+ F + +AC +
Sbjct: 447 VFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSA 506
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G+QI + + G+ + +V++ +CG + +A + + W+ +V W A++
Sbjct: 507 YEQGKQIHVHVLKC-GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMI 564
Query: 393 AACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
HG+ A ++ +++ + PN+ + VLS
Sbjct: 565 GGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLS 600
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 170/374 (45%), Gaps = 52/374 (13%)
Query: 79 NHFMWNTLIRAQASSLNPD-----KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
N F ++++++ + + N + + L M TG +PN+ + + VL AC+ + N
Sbjct: 147 NEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENY 206
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
++H ++ K G D D N L+ Y+ S A VF EI + W +I+G
Sbjct: 207 GMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ + AL L +M P+ TL+S L ACA G ++LG ++H + E + +
Sbjct: 267 HEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFV 326
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
G L+ MY+K G L A+ +FD MP +++ WN++ISG ++ G+ EA+ LF + KE +
Sbjct: 327 GVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGL 386
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK-------------IEHYG--C 358
N T +L + G Q G ++V+ I K ++ YG C
Sbjct: 387 EFNQTTLSTILKS-------TAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCC 439
Query: 359 MVDLLGRCGKVLEAEELIK----------------------RMV---WKPDVVMWGALLA 393
+++ + +V AE+L+ RM KPD ++ +L
Sbjct: 440 LLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFN 499
Query: 394 ACKNHGNIEVAERV 407
AC N E +++
Sbjct: 500 ACANLSAYEQGKQI 513
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 42/283 (14%)
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
V YS AR++ + L W+ +ISGY Q+ R EAL+ + +M + G + N
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 217 VTLASVLSACAQSGCLELGE---------------------------------------- 236
T +SVL C+ + LELG+
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
KVH ++ G++ AL+ MY K+G A A+F +P+ +I +WNA+I+G H
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ AL L K+ ++ P+ T L AC G + +GRQ+ ++ ++ +EP
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKM-DMEPDSFVG 327
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
++D+ +CG + +A + M K DV++W ++++ N G
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSIISGYSNCG 369
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 230/415 (55%), Gaps = 7/415 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH +++ S D F +S L+ G L A +F IQ N WN++I +
Sbjct: 227 KEIHMELVRSGFALDGFVSSALVDM--YGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYS 284
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ I L+ M G P T + +L ACS +L K IH ++ ++ ++ D+
Sbjct: 285 LKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 344
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + L+ Y ++ +A VF + + W MISGY + EAL++F M G
Sbjct: 345 VNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG 404
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+++T SVL AC+Q LE G+++H F+ E+ ++ AL+ MY K GA+ +A
Sbjct: 405 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL 464
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +PER+ +W +MI+ SHG A EAL LF K+++ P+ +TF+ +LSAC HAG
Sbjct: 465 HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 524
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV-WKPDVVMWGA 390
+D G F M YG +P +EHY C++DLLGR G++ EA E+++R + DV +
Sbjct: 525 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLST 584
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA----ESMKMQLEI 441
L +AC H +++ E++ + +I +P++ Y++LSNMYA E K++L+I
Sbjct: 585 LFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKI 639
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 192/373 (51%), Gaps = 12/373 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H +I S D S + A A +LF+ + + WN +I
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSAVGMYA--KCNVFEDAIKLFDEMPERDVASWNNVISCYY 183
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
P+KA+ L+ M+ +GF P+ T T V+ +C+ + L K+IH + +SG LD
Sbjct: 184 QDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGF 243
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + LV Y L A++VF++I+ + + W +MI+GY+ + + LF +M EG
Sbjct: 244 VSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEG 303
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P TL+S+L AC++S L+LG+ +H ++ E + ++L+ +Y K G + A+
Sbjct: 304 IRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 363
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F +MP+ N+ +WN MISG G EAL +F + K + P+ ITF VL AC
Sbjct: 364 NVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLA 423
Query: 332 FIDVGRQIFGSMKRVYGIEPKIE----HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
++ G++I + IE K+E G ++D+ +CG V EA + ++ + D V
Sbjct: 424 VLEKGKEIHN-----FIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPER-DFVS 477
Query: 388 WGALLAACKNHGN 400
W +++AA +HG
Sbjct: 478 WTSMIAAYGSHGQ 490
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 208/375 (55%), Gaps = 14/375 (3%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASR----LLAFCALSSSGDLSYATRLFNSIQSP-NH 80
K + Q K IH Q I+S +Q++ + L C L S L +F +I++P +
Sbjct: 17 KYLKQGKLIH-QKIVSLGLQNNITLCKSLINLYFSCHLFQSAKL-----VFQTIENPLDI 70
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGF-APNQHTFTFVLKACSNVRSLNCCKQIHT 139
+WN L+ A + + + ++ + + P+ T+ VLKACS + + K +HT
Sbjct: 71 TLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHT 130
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
HV KSG +D+ V++ V Y+ + +A ++FDE+ R + W +IS Y Q + +
Sbjct: 131 HVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEK 190
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL LF++M + GF+P+SVTL +V+S+CA+ LE G+++H+ + GF + + +ALV
Sbjct: 191 ALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVD 250
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G L AK +F+ + +N+ +WN+MI+G + G ++ ++LFR++++E I P T
Sbjct: 251 MYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTT 310
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+L AC + + +G+ I G + R +E I ++DL +CG + AE + + M
Sbjct: 311 LSSILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNM 369
Query: 380 VWKPDVVMWGALLAA 394
K +VV W +++
Sbjct: 370 P-KTNVVSWNVMISG 383
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 154/297 (51%), Gaps = 10/297 (3%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN-R 179
+LK C + + L K IH + GL ++ + L+ Y +A+ VF I N
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ +W +++ ++F E L +F ++L +P++ T SVL AC+ G + G+ V
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H V GF M ++ ++ V MY K A LFD MPER++A+WN +IS G
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV-YGIEPKIEHYG 357
E+AL+LF +++ P+ +T V+S+C ++ G++I + R + ++ +
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS--S 246
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKE 410
+VD+ G+CG + A+E+ ++ + + +VV W +++A G+ IE+ R+ +E
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEQ-IQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 302
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 225/411 (54%), Gaps = 34/411 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S+G L + R F+ + N WN++I A + + + L+ MRR GF ++ T
Sbjct: 158 ASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLV 217
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL------------- 166
+L ACS +L + +H + SG +DL + + LV Y DL
Sbjct: 218 SLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIK 277
Query: 167 ------------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
N AR FD + R + W MIS Y Q + +EAL L++QM
Sbjct: 278 SVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQ 337
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+G P+ +TL +VLSA + G L +G+ VH++++ + L +L+ MY K G +
Sbjct: 338 SQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVD 397
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A +LF M RN+ +WN +I GLA HG A + + FR + + P+ ITFV +LSAC
Sbjct: 398 TAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACS 457
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G ++ G+ F SM+ VY ++ ++EHY CMVDLLGR G + +A LIK M KPDVV+W
Sbjct: 458 HGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVW 517
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA---ESMK 436
GALL AC+ HGN+++ +V+K+++ LE + G++V++SN+ E E MK
Sbjct: 518 GALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMK 568
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 222/422 (52%), Gaps = 42/422 (9%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL--AFCALSSSGD--LSYATR 70
+P L L +C+S+ +L Q+HA +++ + AAS LL ++CAL+ +G L +A R
Sbjct: 11 LPSLQKLLRQCRSIQRLNQLHAHLLVHGSLS---AASDLLLASYCALAKAGHGVLCHARR 67
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
LF+ I P+ M+NT+IRA +S P +A+ L+ M R G PN+ T FV+KAC+ ++
Sbjct: 68 LFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQA 127
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
+H + GL + V N L+ Y+ + L ++R+ FDE+ +R + W +MI G
Sbjct: 128 REHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGG 187
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
YAQ+ E LF +M +GF + TL S+L AC+Q G LE+G VH + + G +
Sbjct: 188 YAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVD 247
Query: 251 AILGTALVHMY-------------------------------TKNGALAKAKALFDSMPE 279
IL +ALV MY TK+G++ A+ FD MPE
Sbjct: 248 LILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPE 307
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
RNI +WNAMIS G EALDL+ +++ + + P++IT V VLSA G + VG+ +
Sbjct: 308 RNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMV 367
Query: 340 FGSMK-RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
++ +Y P + ++D+ +CG+V A L M +VV W ++ H
Sbjct: 368 HLYIRDNIY--NPDVSLVNSLLDMYAKCGQVDTAISLFSEMC-NRNVVSWNVIIGGLAMH 424
Query: 399 GN 400
G
Sbjct: 425 GR 426
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 33/294 (11%)
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
CA + G ++ A F+ + N WN +I +A+ LY M+ G AP++
Sbjct: 286 LCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDE 345
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
T VL A + L K +H ++ + + D+ +VN L+ Y+ ++ A +F E
Sbjct: 346 ITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSE 405
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ NR + W +I G A RA + + F M+ + F P+ +T ++LSAC+ G LE G
Sbjct: 406 MCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETG 465
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+ H F MR H+Y + + + M+ L
Sbjct: 466 Q--HYFESMR-------------HVYN---------------VKHEVEHYACMVDLLGRR 495
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
GH E+A+ L +++ + P+ + + +L AC G + +GRQ+ + + GI
Sbjct: 496 GHLEKAVCLIKEMPMK---PDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGI 546
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 224/404 (55%), Gaps = 33/404 (8%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
SG + A LF I + F W +I KA+ LY MR++ PN+ +
Sbjct: 443 SGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDL 502
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGL------------------DLDLHVV---------- 153
L AC S+ +Q H+ + K+G +DL +
Sbjct: 503 LSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHL 562
Query: 154 ---NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
N ++ ++ + ++ ARQ+FD + + + W+TMISGYAQ+ + AL LF M+
Sbjct: 563 TSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDS 622
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
EPN +T+ SV SA A G L G H +V + + L A++ MY K G++ A
Sbjct: 623 KVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTA 682
Query: 271 KALFDSMPERN--IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+F + ++ ++ WNA+I GLA HGHA +L++F L++ I N ITF+GVLSACC
Sbjct: 683 LDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACC 742
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
HAG ++VG + F SMK +G+EP I+HYGC+VDLLGR G++ EAEE+++ M K DVV+W
Sbjct: 743 HAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIW 802
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
G LLA+ + HG +E+ ER + + L+P++ V+LSN+YA+A
Sbjct: 803 GTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADA 846
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 176/400 (44%), Gaps = 66/400 (16%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L A +LF + + T+I A + +AI ++ +MR G APN+ T V+ A
Sbjct: 314 LENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSA 373
Query: 125 CSNVRSLNCCKQIHTHVSK---SGLDLD----LHVV------------------------ 153
CS++ + C+ +H V K GL L LH+
Sbjct: 374 CSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSW 433
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N +++ Y S ++ AR++F+ I R + W MI G+ Q R +AL+L+ M
Sbjct: 434 NVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLH 493
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY------------ 261
PN V + +LSAC QS +E G + H + GF + ++ Y
Sbjct: 494 PNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQ 553
Query: 262 -------------------TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
TKNG + +A+ +FD MPE+++ +W+ MISG A + + AL
Sbjct: 554 YQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVAL 613
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVD 361
DLF + ++ PN+IT V V SA G + GR + +V + + ++D
Sbjct: 614 DLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLS--AAIID 671
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVM-WGALLAACKNHGN 400
+ +CG + A ++ +++ K V W A++ HG+
Sbjct: 672 MYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 711
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 123/280 (43%), Gaps = 62/280 (22%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCY--------------------S 161
LK C++ +++ +QIH V K G + + ++N L+ Y S
Sbjct: 239 LKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDS 298
Query: 162 VSSD-----------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
VS + L NARQ+F ++ R +TTMI G AQ+ EA+ +F M
Sbjct: 299 VSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSA 358
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G PN VT+ASV+SAC+ G + +H V F ++ T L+HMY +L
Sbjct: 359 GVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDT 418
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK----------------------- 307
K LF+ MP RN +WN M+ G G ++A +LF +
Sbjct: 419 KRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLR 478
Query: 308 --------LEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
+ K + PN++ V +LSAC + I+ GRQ
Sbjct: 479 KALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQF 518
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 126/259 (48%), Gaps = 5/259 (1%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+ H +S ++ + +G + A ++F+ + + F W+T+I A + PD A+ L+
Sbjct: 559 KSHLTSSNVM-IVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFH 617
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M + PN+ T V A + + L + H +V + L+ ++ ++ Y+
Sbjct: 618 GMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCG 677
Query: 165 DLNNARQVFDEIRNRTLNV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
++ A VF +I+++T V W +I G A AN +L +F + + NS+T V
Sbjct: 678 SIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGV 737
Query: 223 LSACAQSGCLELGEKVHVFVKMR-GFEMGAILGTALVHMYTKNGALAKAKALFDSMPER- 280
LSAC +G +E+GE+ +K + G E LV + + G L +A+ + +MP +
Sbjct: 738 LSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKA 797
Query: 281 NIATWNAMISGLASHGHAE 299
++ W +++ +HG E
Sbjct: 798 DVVIWGTLLASSRTHGEVE 816
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 31/148 (20%)
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+++ S L CA S + G+++H V GF + +L++MY K G L+ A+ LFDS
Sbjct: 233 LSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDS 292
Query: 277 -------------------------------MPERNIATWNAMISGLASHGHAEEALDLF 305
MPER ++ MI GLA + EA+++F
Sbjct: 293 CSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVF 352
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFI 333
+ + + PN++T V+SAC H G I
Sbjct: 353 KDMRSAGVAPNEVTMASVMSACSHIGGI 380
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 234/424 (55%), Gaps = 6/424 (1%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H Q++ + D F + L+ A G++ A +F+ + + W +I +
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYA--KCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQA 211
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
P KA+ L+ M+ GF ++ T V A + +H + +G D+ V
Sbjct: 212 ERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVG 271
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N +V Y+ ++ AR VFD + R W +M+SGY Q+ R +AL LF+QM +
Sbjct: 272 NSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECD 331
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN VT ++SAC+ G LG K+H FV ++ L A++ MY K G L A +
Sbjct: 332 PNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEM 391
Query: 274 FDS--MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
F++ + ER++++WN +ISG HGH +EAL+LF +++ E + PNDITF +LSAC HAG
Sbjct: 392 FNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAG 451
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
ID GR+ F M ++ + P+++HY CMVD+LGR G + EA LIK++ +P +WGAL
Sbjct: 452 LIDEGRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGAL 510
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGL 451
L AC+ HGN E+ E + LEP + G YV++SN+YA + K ++E++ + GL
Sbjct: 511 LLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWK-EVEMVRQNMKSRGL 569
Query: 452 ASAA 455
A
Sbjct: 570 KKPA 573
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 220/426 (51%), Gaps = 27/426 (6%)
Query: 13 LPIPPLSLLADK----CKSMHQLKQIHAQMIISSRI--QDHFAASRLLAFCALSSSGDLS 66
L +P L D C S+ LK IH+ + + HF A ++ + L GDL
Sbjct: 19 LALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKL---GDLH 75
Query: 67 YATRLFNS--------IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
A LF+ Q+PN F+ NT++RA A++ +AI LY+ M+R G N T+
Sbjct: 76 SARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTY 135
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
FVLK C++ + +H V ++G DL V LV Y+ ++ +A +VFD +
Sbjct: 136 PFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLI 195
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
R + WT MI+ Y Q+ R +ALMLF +M EGF + +T SV SA Q G + V
Sbjct: 196 RDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISV 255
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + + GF +G ++V MY K G + +A+ +FD M ERN +WN+M+SG +G
Sbjct: 256 HGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRP 315
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYG 357
+AL LF +++ + PN +T + ++SAC + G +GR++ + I+ + +
Sbjct: 316 TDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRN-- 373
Query: 358 CMVDLLGRCGKVLEAEELIKRM-VWKPDVVMWGALLAACKNHGN----IEVAERVVKEII 412
++D+ +CG + A E+ + + DV W L++ HG+ +E+ R+ ++
Sbjct: 374 AIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM--QVE 431
Query: 413 ALEPNN 418
+EPN+
Sbjct: 432 GVEPND 437
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 252/450 (56%), Gaps = 20/450 (4%)
Query: 3 LKCSSLRQ----PPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLA 55
L SS+R+ P P ++ A C S+ + KQ H Q + D F +S L+
Sbjct: 62 LAFSSMRKLSLYPTRSSFPCAIKA--CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIV 119
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
S+ G L A ++F+ I + W ++IR + N A+ L+ ++ +
Sbjct: 120 M--YSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDD 177
Query: 116 HTF------TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD--LN 167
F V+ ACS V + + IH+ V K G D + V N L+ Y+ + +
Sbjct: 178 AMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP-NSVTLASVLSAC 226
AR++FD+I ++ + +++S YAQS +NEA +F +++ N++TL++VL A
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+ SG L +G+ +H V G E I+GT+++ MY K G + A+ FD M +N+ +W
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWT 357
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
AMI+G HGHA +AL+LF + + PN ITFV VL+AC HAG G + F +MK
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
+G+EP +EHYGCMVDLLGR G + +A +LI+RM KPD ++W +LLAAC+ H N+E+AE
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
V + L+ +N G Y++LS++YA+A K
Sbjct: 478 SVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 201/384 (52%), Gaps = 18/384 (4%)
Query: 69 TRLFNS-IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
T LFN + + F WN++I A S + +A+ + +MR+ P + +F +KACS+
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + KQ H G D+ V + L+ YS L +AR+VFDEI R + WT+M
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSM 148
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEP------NSVTLASVLSACAQSGCLELGEKVHVF 241
I GY + A +A+ LF +L++ + +S+ L SV+SAC++ L E +H F
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 242 VKMRGFEMGAILGTALVHMYTK--NGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V RGF+ G +G L+ Y K G +A A+ +FD + +++ ++N+++S A G +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 300 EALDLFRKLEKEQIVP-NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EA ++FR+L K ++V N IT VL A H+G + +G+ I + R+ G+E +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTS 327
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEP 416
++D+ +CG+V A + RM K +V W A++A HG+ A + +I + P
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 417 NNHGVYVVLSNMYAEAESMKMQLE 440
N Y+ ++ A + +E
Sbjct: 387 N----YITFVSVLAACSHAGLHVE 406
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 213/374 (56%), Gaps = 1/374 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+L+ A +F + W ++I A +AI L+ M+ G P+ + T
Sbjct: 305 SKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVT 364
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ AC+ SL+ +++H H+ K+ + +L V N L+ Y+ + A +F ++ +
Sbjct: 365 SVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK 424
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W TMI GY+Q+ NEAL LF M + +P+ VT+A VL ACA LE G ++H
Sbjct: 425 NIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIH 483
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ +G+ + ALV MY K G L A+ LFD +P++++ W MI+G HG +
Sbjct: 484 GHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGK 543
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA+ F K+ I P + +F +L AC H+G + G ++F SMK IEPK+EHY CM
Sbjct: 544 EAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACM 603
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLL R G + A + I+ M KPD +WGALL+ C+ H ++E+AE+V + I LEP N
Sbjct: 604 VDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENT 663
Query: 420 GVYVVLSNMYAEAE 433
YV+L+N+YAEAE
Sbjct: 664 RYYVLLANVYAEAE 677
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 177/338 (52%), Gaps = 5/338 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++ A LF+ + + WN++I + + ++ M G + T VL
Sbjct: 207 GEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVL 266
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+NV +L + +H + K+G + N L+ YS +LN A +VF ++ T+
Sbjct: 267 VACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIV 326
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT++I+ + + EA+ LFD+M +G P+ + SV+ ACA S L+ G +VH +
Sbjct: 327 SWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHI 386
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
K + AL++MY K G++ +A +F +P +NI +WN MI G + + EAL
Sbjct: 387 KKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEAL 446
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC-MVD 361
LF ++K Q+ P+D+T VL AC ++ GR+I G + R G + H C +VD
Sbjct: 447 QLFLDMQK-QLKPDDVTMACVLPACAGLAALEKGREIHGHILR-KGYFSDL-HVACALVD 503
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ +CG ++ A++L M+ K D+++W ++A HG
Sbjct: 504 MYVKCGLLVLAQQLFD-MIPKKDMILWTVMIAGYGMHG 540
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 188/377 (49%), Gaps = 10/377 (2%)
Query: 21 LADKCKSMHQLKQIHAQMIISSR---IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L + KS+ K++H+ IISS I + A + + + GDL R+F+ I +
Sbjct: 66 LCAELKSLEDGKRVHS--IISSNGMAIDEVLGAKLVFMYV---NCGDLVKGRRIFDGILN 120
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
F+WN L+ A N +++ L+ M+ G + +TFT VLK + + CK++
Sbjct: 121 DKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRV 180
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H +V K G VVN L+ Y ++ +AR +FDE+ +R + W +MISG + +
Sbjct: 181 HGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFS 240
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
L F QML G + +S TL +VL ACA G L LG +H + GF G + L
Sbjct: 241 RNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTL 300
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ MY+K G L A +F M E I +W ++I+ G EA+ LF +++ + + P+
Sbjct: 301 LDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDI 360
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
V+ AC + +D GR++ +K+ + + ++++ +CG + EA +
Sbjct: 361 YAVTSVVHACACSNSLDKGREVHNHIKK-NNMGSNLPVSNALMNMYAKCGSMEEANLIFS 419
Query: 378 RMVWKPDVVMWGALLAA 394
++ K ++V W ++
Sbjct: 420 QLPVK-NIVSWNTMIGG 435
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 145/279 (51%), Gaps = 2/279 (0%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
+T+ VL+ C+ ++SL K++H+ +S +G+ +D + LV Y DL R++FD
Sbjct: 58 NTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDG 117
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
I N + +W ++S YA+ E++ LF++M G +S T VL A S +
Sbjct: 118 ILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVREC 177
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
++VH +V GF + +L+ Y K G + A+ LFD + +R++ +WN+MISG +
Sbjct: 178 KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMN 237
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G + L+ F ++ + + T V VL AC + G + +GR + + G +
Sbjct: 238 GFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKA-GFSGGVMF 296
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++D+ +CG + A E+ +M + +V W +++AA
Sbjct: 297 NNTLLDMYSKCGNLNGANEVFVKM-GETTIVSWTSIIAA 334
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 223/409 (54%), Gaps = 5/409 (1%)
Query: 25 CKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C S+ L +QIH Q+I S + + S L+ A G+L A + ++ +
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYA--KHGELDTARGILQRLREEDVV 482
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
W +I +A+ L+ M G + F+ + AC+ +++LN +QIH
Sbjct: 483 SWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQS 542
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
SG DL + N LV Y+ +A F++I + W +ISG+AQS EAL
Sbjct: 543 YISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEAL 602
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
+F QM G E N T S +SA A + ++ G+++H + G++ L+ +Y
Sbjct: 603 QVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLY 662
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+K G++ AK F MPE+N+ +WNAMI+G + HG+ EA+ LF ++++ ++PN +TFV
Sbjct: 663 SKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFV 722
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVLSAC H G ++ G F SM + +G+ PK EHY C+VDLLGR + A E I+ M
Sbjct: 723 GVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPI 782
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+PD ++W LL+AC H NIE+ E + ++ LEP + YV+LSNMYA
Sbjct: 783 EPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYA 831
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 215/431 (49%), Gaps = 14/431 (3%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSM---HQLKQIHAQMIISSRIQDHFAASRLLAFC 57
M L C P + SLL+ C S+ ++ KQ+H+ +I D LL
Sbjct: 305 MQLDC----MKPDCVTVASLLS-ACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
D+ A F + ++ N +WN ++ A N ++ ++++ M+ G PNQ+T
Sbjct: 360 V--KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYT 417
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ +L+ C+++ +L+ +QIHT V KSG +++V + L+ Y+ +L+ AR + +R
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ WT MI+GY Q EAL LF +M +G +++ +S +SACA L G++
Sbjct: 478 EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ 537
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H + G+ +G ALV +Y + G A F+ + ++ +WNA+ISG A GH
Sbjct: 538 IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGH 597
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EEAL +F ++ + + N TF +SA + I G+QI M + G + + E
Sbjct: 598 CEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASN 656
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALE 415
++ L +CG + +A+ M K +VV W A++ HG A + +E+ + L
Sbjct: 657 VLITLYSKCGSIEDAKREFFEMPEK-NVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLM 715
Query: 416 PNNHGVYVVLS 426
PN+ VLS
Sbjct: 716 PNHVTFVGVLS 726
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 197/413 (47%), Gaps = 8/413 (1%)
Query: 3 LKCSSLRQPPLPIP-PLSLLADKCKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCA 58
L C + +P P S + C + K Q+H ++ + F + L+
Sbjct: 200 LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTL-- 257
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
S G+L A ++F+ + + +N+LI A D+A+ L+ M+ P+ T
Sbjct: 258 YSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTV 317
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
+L AC++V + KQ+H++V K G+ DL + L+ Y D+ A + F
Sbjct: 318 ASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTET 377
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ +W M+ Y Q +E+ +F QM +EG PN T S+L C G L+LGE++
Sbjct: 378 ENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQI 437
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H V GF+ + + L+ MY K+G L A+ + + E ++ +W AMI+G H
Sbjct: 438 HTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLF 497
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EAL LF+++E + I ++I F +SAC ++ G+QI + + G +
Sbjct: 498 AEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIH-AQSYISGYSEDLSIGNA 556
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+V L RCG+ +A +++ K D + W AL++ G+ E A +V ++
Sbjct: 557 LVSLYARCGRAQDAYLAFEKIDAK-DNISWNALISGFAQSGHCEEALQVFSQM 608
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 197/396 (49%), Gaps = 7/396 (1%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ K++HA++ S + SRL+ + G++ A +LF+ I S N WN +
Sbjct: 25 SLLDAKKLHARIFKSGFDGEDVLGSRLIDI--YLAHGEVDNAIKLFDDIPSSNVSFWNKV 82
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS-LNCCKQIHTHVSKSG 145
I + + + L+ M P++ TF VL+ACS ++ +QIH + G
Sbjct: 83 ISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHG 142
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
V N L+ YS + ++ A+ VF+ + + W MISG +Q+ R +EA++LF
Sbjct: 143 FGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFC 202
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM P +SVLSAC + +LGE++H F+ G + ALV +Y++ G
Sbjct: 203 QMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWG 262
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L A+ +F M R+ ++N++ISGLA G ++ AL LF K++ + + P+ +T +LS
Sbjct: 263 NLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLS 322
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC G G+Q+ + ++ G+ + G ++DL +C + A E +V
Sbjct: 323 ACASVGAGYKGKQLHSYVIKM-GMSSDLIIEGSLLDLYVKCFDIETAHEYF-LTTETENV 380
Query: 386 VMWGALLAACKNHGNIEVAERVV--KEIIALEPNNH 419
V+W +L A GN+ + + +I L PN +
Sbjct: 381 VLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 191/383 (49%), Gaps = 10/383 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA---FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
+QIHA++I F +S L+ S +G + A +F + + W +I
Sbjct: 132 EQIHAKII-----HHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMIS 186
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+ + D+AI L+ M ++ P + F+ VL AC+ + +Q+H + K GL
Sbjct: 187 GLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSS 246
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ V N LV YS +L A Q+F ++ R + ++ISG AQ ++ AL LF++M
Sbjct: 247 ETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQ 306
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
++ +P+ VT+AS+LSACA G G+++H +V G I+ +L+ +Y K +
Sbjct: 307 LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIE 366
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A F + N+ WN M+ G+ E+ +F +++ E ++PN T+ +L C
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
G +D+G QI + + G + + ++D+ + G++ A +++R+ + DVV W
Sbjct: 427 SLGALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSW 484
Query: 389 GALLAACKNHGNIEVAERVVKEI 411
A++A H A ++ +E+
Sbjct: 485 TAMIAGYTQHDLFAEALKLFQEM 507
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 155/295 (52%), Gaps = 3/295 (1%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M G N T+ ++ + C N SL K++H + KSG D + + + L+ Y +
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
++NA ++FD+I + ++ W +ISG A++ L LF M+ E P+ T ASVL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 226 CAQSGC-LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
C+ ++ E++H + GF ++ L+ +Y+KNG + AK +F+ + ++ +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
W AMISGL+ +G +EA+ LF ++ K ++P F VLSAC +G Q+ G +
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ +G+ + +V L R G ++ AE++ +M + D + + +L++ G
Sbjct: 241 K-WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM-HRRDRISYNSLISGLAQRG 293
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M G N T + C SG L +K+H + GF+ +LG+ L+ +Y +G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A LFD +P N++ WN +ISGL + A + L LF + E + P++ TF VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-------C--MVDLLGRCGKVLEAEELIK 377
C G+ F ++++ KI H+G C ++DL + G V A+ + +
Sbjct: 121 CSG------GKAPFQVTEQIHA---KIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFE 171
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVA 404
R+ K D V W A+++ +G + A
Sbjct: 172 RLFLK-DSVSWVAMISGLSQNGREDEA 197
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 239/452 (52%), Gaps = 32/452 (7%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +CK++ +L++IHAQ + + + S + F + + G + A RLF+ I P+
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKI-FRSYAEFGRPADAGRLFDEIPHPDI 84
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+ +L+ + KAI ++ + +G P+ L A + +H
Sbjct: 85 ISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGL 144
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD-------------------------- 174
+ + GLD +L V N LV Y AR VFD
Sbjct: 145 IFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSA 204
Query: 175 -----EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
++ ++ WT +I+G+ Q + +AL LF +ML+EG PN +T+ VLSACA
Sbjct: 205 LSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADI 264
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
G L+LG +H + I+ AL+ MY K+G++A A ++F+ + ++ TW MI
Sbjct: 265 GALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMI 324
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
S G+ +A++LF + + I+PN +TFV VLSAC HAG I GR++F M+ VY I
Sbjct: 325 SSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHI 384
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+P++EHYGCMVDLLGR G + EAE LI M +PD+V+W +LL+AC HGN +AE
Sbjct: 385 DPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGM 444
Query: 410 EIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
EII EP + GVYV+L NMYA + K L++
Sbjct: 445 EIIKREPGDDGVYVLLWNMYALSNRWKEALDM 476
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 154/361 (42%), Gaps = 49/361 (13%)
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC-LVRCYSV 162
+ +RR G N+ +L C +R L ++IH GL + ++C + R Y+
Sbjct: 11 LALRRGGM--NRSVCHHLLTQCKTIREL---QRIHAQALTHGLHPNQQSISCKIFRSYAE 65
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
+A ++FDEI + + +T+++S + + +A+ +F + G P+
Sbjct: 66 FGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGA 125
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD------- 275
LSA G +G VH + G + ++ ALV MY + G A+ +FD
Sbjct: 126 LSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDE 185
Query: 276 ------------------------SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
MP ++ +W A+I+G +AL+LF K+ E
Sbjct: 186 VTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLE 245
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP----KIEHYGCMVDLLGRCG 367
PN IT VGVLSAC G +D+GR I G YG + I ++D+ + G
Sbjct: 246 GHRPNHITIVGVLSACADIGALDLGRAIHG-----YGSKSNATTNIIVTNALMDMYAKSG 300
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVL 425
+ A + + + K D W ++++ GN A + +++ + PN+ VL
Sbjct: 301 SIASAFSVFEEVQMK-DAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVL 359
Query: 426 S 426
S
Sbjct: 360 S 360
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 237/407 (58%), Gaps = 19/407 (4%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA- 89
++ +H+ ++ ++D F + L+ A S +G S A ++F+ + + WNT + A
Sbjct: 147 VRAVHSHVVKLGSVEDTFVGNALID--AYSKNGGFSDARKVFDEMPERDVVSWNTAMAAM 204
Query: 90 -QASSLNPDKAIFLYMNMRRTGFAPNQHTFTF--VLKACSNVRSLNCCKQIHTHVSKSGL 146
+ L + +F M P + T ++ +L + + ++ +
Sbjct: 205 VREGELAGVRKLFDEM--------PEKDTVSWNTILDGYTKAGEVEAAFELFQRMP---- 252
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ ++ + +V Y DL AR +FD++ ++ L WT M+S AQ +EA LF Q
Sbjct: 253 ERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQ 312
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M E + + S+L+ACA+SG L LG+++H +V+ R + AL+ M+ K G
Sbjct: 313 MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGC 372
Query: 267 LAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ +A +FD+ +++ +WN++I G A HGH ++AL+LF +++++ P+ +T + VLS
Sbjct: 373 VNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLS 432
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H GF+D GR+ F +M+R YGI P+IEHYGCM+DLLGR G + EA +LIK M W+P+
Sbjct: 433 ACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNE 492
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
V+WG+LL+AC+ H N+E AE V E+ L+P+N G Y VLSN+YAEA
Sbjct: 493 VIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEA 539
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 152/311 (48%), Gaps = 18/311 (5%)
Query: 96 PDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
P A+ + M RR F T++F++KA S + + +H+HV K G D V N
Sbjct: 114 PRDALAAFSAMPRRDSF-----TYSFLIKALSAA-GVAPVRAVHSHVVKLGSVEDTFVGN 167
Query: 155 CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
L+ YS + ++AR+VFDE+ R + W T ++ + LFD+M E
Sbjct: 168 ALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMP----EK 223
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
++V+ ++L ++G E+ +F +M E + + +V Y K G L A+ +F
Sbjct: 224 DTVSWNTILDGYTKAG--EVEAAFELFQRMP--ERNVVSWSTMVSGYCKKGDLEMARVIF 279
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
D MP +N+ TW M+S A G +EA LF ++++ + + V +L+AC +G +
Sbjct: 280 DKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLS 339
Query: 335 VGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
+G++I + KR G + ++D+ +CG V A+ + + D V W +++
Sbjct: 340 LGKRIHRYVRKRNLGRSTHV--CNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIG 397
Query: 394 ACKNHGNIEVA 404
HG+ + A
Sbjct: 398 GFAMHGHGDKA 408
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 226/415 (54%), Gaps = 8/415 (1%)
Query: 32 KQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+HA+ + + S H S L + + G L A R+F+ + P+ W LI A
Sbjct: 138 EQLHARSLKLPSHTNPHVLTSLLTLY---ARCGLLHRAQRVFDEMPHPSTVSWTALITAY 194
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ + +A+ + N G P+ T VL AC+ V L + + + G+ +
Sbjct: 195 MDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSV 254
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V V Y ++ AR+VFD++R++ W M+ GYA + EAL LF M E
Sbjct: 255 FVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAE 314
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G P+ +A LSAC + G L+LG + V F +LGTAL+ MY K G+ A+A
Sbjct: 315 GVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEA 374
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F M +++I WNAMI GL GH + A L ++EK + ND TF+G+L +C H
Sbjct: 375 WVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHT 434
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G I GR+ F +M ++Y I P+IEHYGC+VDLL R G + EA +LI M + V+ GA
Sbjct: 435 GLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGA 494
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE----AESMKMQLEI 441
LL CK H N E+AE V+ ++I LEP N G YV+LSN+Y+ ++ K++L++
Sbjct: 495 LLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDM 549
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 3/281 (1%)
Query: 113 PNQHTFTFVLKACSNV-RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
P+ TF LK+ S + L +Q+H K + HV+ L+ Y+ L+ A++
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFDE+ + + WT +I+ Y + EA+ + G P+S T VL+ACA+
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L GE V + G + TA V +Y K G +AKA+ +FD M +++ W AM+ G
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 294
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
AS+GH EALDLF ++ E + P+ G LSAC G +D+GRQ + ++
Sbjct: 295 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 354
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ ++D+ +CG EA + ++M K D+++W A++
Sbjct: 355 PVLGTA-LIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMI 393
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 226/415 (54%), Gaps = 8/415 (1%)
Query: 32 KQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+HA+ + + S H S L + + G L A R+F+ + P+ W LI A
Sbjct: 91 EQLHARSLKLPSHTNPHVLTSLLTLY---ARCGLLHRAQRVFDEMPHPSTVSWTALITAY 147
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ + +A+ + N G P+ T VL AC+ V L + + + G+ +
Sbjct: 148 MDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSV 207
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V V Y ++ AR+VFD++R++ W M+ GYA + EAL LF M E
Sbjct: 208 FVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAE 267
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G P+ +A LSAC + G L+LG + V F +LGTAL+ MY K G+ A+A
Sbjct: 268 GVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEA 327
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F M +++I WNAMI GL GH + A L ++EK + ND TF+G+L +C H
Sbjct: 328 WVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHT 387
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G I GR+ F +M ++Y I P+IEHYGC+VDLL R G + EA +LI M + V+ GA
Sbjct: 388 GLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGA 447
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE----AESMKMQLEI 441
LL CK H N E+AE V+ ++I LEP N G YV+LSN+Y+ ++ K++L++
Sbjct: 448 LLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDM 502
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 3/281 (1%)
Query: 113 PNQHTFTFVLKACSNV-RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
P+ TF LK+ S + L +Q+H K + HV+ L+ Y+ L+ A++
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFDE+ + + WT +I+ Y + EA+ + G P+S T VL+ACA+
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L GE V + G + TA V +Y K G +AKA+ +FD M +++ W AM+ G
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 247
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
AS+GH EALDLF ++ E + P+ G LSAC G +D+GRQ + ++
Sbjct: 248 YASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 307
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ ++D+ +CG EA + ++M K D+++W A++
Sbjct: 308 PVLGTA-LIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMI 346
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 237/407 (58%), Gaps = 19/407 (4%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA- 89
++ +H+ ++ ++D F + L+ A S +G S A ++F+ + + WNT + A
Sbjct: 454 VRAVHSHVVKLGSVEDTFVGNALID--AYSKNGGFSDARKVFDEMPERDVVSWNTAMAAM 511
Query: 90 -QASSLNPDKAIFLYMNMRRTGFAPNQHTFTF--VLKACSNVRSLNCCKQIHTHVSKSGL 146
+ L + +F M P + T ++ +L + + ++ +
Sbjct: 512 VREGELAGVRKLFDEM--------PEKDTVSWNTILDGYTKAGEVEAAFELFQRMP---- 559
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+ ++ + +V Y DL AR +FD++ ++ L WT M+S AQ +EA LF Q
Sbjct: 560 ERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQ 619
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M E + + S+L+ACA+SG L LG+++H +V+ R + AL+ M+ K G
Sbjct: 620 MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGC 679
Query: 267 LAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ +A +FD+ +++ +WN++I G A HGH ++AL+LF +++++ P+ +T + VLS
Sbjct: 680 VNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLS 739
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H GF+D GR+ F +M+R YGI P+IEHYGCM+DLLGR G + EA +LIK M W+P+
Sbjct: 740 ACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNE 799
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
V+WG+LL+AC+ H N+E AE V E+ L+P+N G Y VLSN+YAEA
Sbjct: 800 VIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEA 846
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 152/311 (48%), Gaps = 18/311 (5%)
Query: 96 PDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
P A+ + M RR F T++F++KA S + + +H+HV K G D V N
Sbjct: 421 PRDALAAFSAMPRRDSF-----TYSFLIKALSAA-GVAPVRAVHSHVVKLGSVEDTFVGN 474
Query: 155 CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP 214
L+ YS + ++AR+VFDE+ R + W T ++ + LFD+M E
Sbjct: 475 ALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMP----EK 530
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
++V+ ++L ++G +E +F +M E + + +V Y K G L A+ +F
Sbjct: 531 DTVSWNTILDGYTKAGEVEAA--FELFQRMP--ERNVVSWSTMVSGYCKKGDLEMARVIF 586
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
D MP +N+ TW M+S A G +EA LF ++++ + + V +L+AC +G +
Sbjct: 587 DKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLS 646
Query: 335 VGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
+G++I + KR G + ++D+ +CG V A+ + + D V W +++
Sbjct: 647 LGKRIHRYVRKRNLGRSTHV--CNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIG 704
Query: 394 ACKNHGNIEVA 404
HG+ + A
Sbjct: 705 GFAMHGHGDKA 715
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 220/385 (57%), Gaps = 13/385 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFM-------WNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
S G L A +FNS HF+ WN +I S +KA+ L+ M +
Sbjct: 318 SKCGSLQEARSIFNS-----HFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIY 372
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD-LHVVNCLVRCYSVSSDLNNARQ 171
+ +T+ V A + ++ L+ K++H KSGL+++ + + N + Y+ L + R+
Sbjct: 373 LDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRK 432
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VF+ + +R L WT++++ Y+Q ++A+ +F M EG PN T +SVL +CA
Sbjct: 433 VFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCL 492
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LE G++VH + G +M + +ALV MY K G L AK +F+ + + +W A+I+G
Sbjct: 493 LEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAG 552
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HG ++AL LFR++ + + PN +TF+ VL AC H G ++ G Q F MK+ YG+ P
Sbjct: 553 HAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVP 612
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++EHY C+VDLL R G + +A E I RM +P+ ++W LL AC+ HGN+E+ E ++I
Sbjct: 613 EMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKI 672
Query: 412 IALEPNNHGVYVVLSNMYAEAESMK 436
++ + N YV+LSN Y E+ S K
Sbjct: 673 LSFKAENSATYVLLSNTYIESGSYK 697
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 180/389 (46%), Gaps = 10/389 (2%)
Query: 13 LPIPPLSLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAFC-ALSSSGDLSYA 68
L I PL L C + + Q K +H ++ S+ +H + L A S D+ A
Sbjct: 66 LQIQPLVDLLRDCVDARFLKQAKTVHG-FLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAA 124
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
RLF+ + N F W LI A + + M+ G P+Q ++ +L+ C +
Sbjct: 125 CRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGL 184
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
S+ +H + G V L+ Y+ ++ ++ +VF+ + + W MI
Sbjct: 185 DSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMI 244
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+G+ + +A LF +M+ EG P++ T V A + ++V + G +
Sbjct: 245 TGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVD 304
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDS--MPERNIATWNAMISGLASHGHAEEALDLFR 306
++GTAL+ M +K G+L +A+++F+S + R A WNAMISG G E+AL+LF
Sbjct: 305 SNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFA 364
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK-IEHYGCMVDLLGR 365
K+ + I + T+ V +A + +G+++ + G+E + + + +
Sbjct: 365 KMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKS-GLEVNYVSISNAVANAYAK 423
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAA 394
CG + + ++ RM D++ W +L+ A
Sbjct: 424 CGSLEDVRKVFNRME-DRDLISWTSLVTA 451
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 217/377 (57%), Gaps = 3/377 (0%)
Query: 63 GDLSYATRLFNSI-QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFT 119
G + A LF + N W +I + + + L+ M + PN T
Sbjct: 173 GQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMV 232
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L ACS + + + + + + + L+ +V L+ YS D+ A ++FD + +
Sbjct: 233 CLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK 292
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L W +I+G Q EA+ L+ M + +PN +TL +VLSACA G LELG +VH
Sbjct: 293 NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVH 352
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+++ G ++ IL TALV MY K G + A +F E+++A WNAMI GLA HG
Sbjct: 353 LYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGR 412
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
++L +F ++ + + PND+TF+GVLSAC H+G ++ GR F SM +G+ PK+EHY CM
Sbjct: 413 DSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACM 472
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G + EA EL++ M+ PD ++WGALL+AC+ H N+E+A+++ + I+A + N
Sbjct: 473 VDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNI 532
Query: 420 GVYVVLSNMYAEAESMK 436
G ++LSN+YA + K
Sbjct: 533 GFCILLSNIYASSGRWK 549
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 230/446 (51%), Gaps = 47/446 (10%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSR-IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
LSLL S+ Q+ QIHAQ +I +Q H L + YA + +
Sbjct: 3 LSLLR-TATSLTQIHQIHAQTLIHGLPLQTHLIPK-------LIDLHSIDYARFVLDQTP 54
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
SP F WN+LIRA +P ++FLY+ M R+ P+ TF FVLKACS + S+ +Q
Sbjct: 55 SPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQ 114
Query: 137 IHTHVSKSGLDLDLHVVNCLV----RCYSVSSDLN------------------------- 167
IHTHV + G DL V N L+ +C+ + S N
Sbjct: 115 IHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQ 174
Query: 168 --NARQVFDEI-RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE--PNSVTLASV 222
AR +F+E+ R + WT MI+GY + E L LF QML+ E PN+ T+ +
Sbjct: 175 VEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCL 234
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSAC+ E+G + VF+ + + IL TAL+ MY+K G + KA +FD + +N+
Sbjct: 235 LSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNL 294
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
+WNA+I+G G EEA+DL+R ++ + + PN+IT V VLSAC G +++GR++
Sbjct: 295 PSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLY 354
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ R G++ + +VD+ +CGK+ +A LI + DV +W A++ HG+
Sbjct: 355 LGR-NGLDLNVILATALVDMYAKCGKIDDA-CLIFVKTSEKDVALWNAMILGLAYHGDGR 412
Query: 403 VAERVVKEII--ALEPNNHGVYVVLS 426
+ V +++ ++PN+ VLS
Sbjct: 413 DSLAVFSQMVRAGVQPNDVTFIGVLS 438
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S GD+ A R+F+ + N WN +I ++AI LY +M+ PN+ T
Sbjct: 274 SKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLV 333
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
VL AC+ + +L +++H ++ ++GLDL++ + LV Y+ +++A +F + +
Sbjct: 334 NVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEK 393
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE-KV 238
+ +W MI G A ++L +F QM+ G +PN VT VLSAC SG +E G +
Sbjct: 394 DVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQF 453
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM--PERNIATWNAMISGLASHG 296
G +V + + G L +A L +M P +I W A++S H
Sbjct: 454 SSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSI-IWGALLSACRIHR 512
Query: 297 HAEEA 301
+ E A
Sbjct: 513 NLELA 517
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 222/404 (54%), Gaps = 33/404 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTF 118
+SS L A +LF+ + + W TL+ A PD+A ++ M G PN+ T
Sbjct: 177 ASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTL 236
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV----RCYSVSS---------- 164
A + L + +H V +SG+ + +++ N LV +C V+S
Sbjct: 237 VAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPI 296
Query: 165 -----------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
DL NA ++F EI NR W+ M++ Y+Q+ EA+ +F+ M
Sbjct: 297 KDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDM 356
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAILGTALVHMYTKNGA 266
+ G EP TL SVLSACAQ GCL++G ++ ++ E+ L A + M+ K G
Sbjct: 357 IAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGD 416
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A LF +M ++N+ +WN MI A HG +EEAL LF+K + I P++IT++GVLSA
Sbjct: 417 VGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSA 476
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H+G + GR F MK VYGIEP+ EHY CM+DLLG+ G + EA E+ + M D
Sbjct: 477 CSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEA 536
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
WGALL AC+ HGN+E+ + +++ L+P++ G+YV++S +YA
Sbjct: 537 GWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYA 580
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 209/433 (48%), Gaps = 38/433 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATR-LFNS 74
P LSLL + C S +L Q+ A + +S F ASRLLAFCALS L++A L
Sbjct: 33 PLLSLL-ESCASFRRLLQLQALLTVSGLAAHRFPASRLLAFCALSDPPRLAHAAAVLAQC 91
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ PN +M T++R + P A+ L+ + R + T F +KA + S +
Sbjct: 92 AEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATT--SSSPA 149
Query: 135 KQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ IH K G + + V N LV Y+ S L +AR++FDE+ +R + WTT++ GYA+
Sbjct: 150 EAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYAR 209
Query: 194 SFRANEALMLFDQMLMEGFE-PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+EA +F +M++ G PN VTL + SA Q G L LG VH V G M
Sbjct: 210 GGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVN 269
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
L ALV M+ K G +A AK +FD MP +++ +W +M+S A G E A LF+++
Sbjct: 270 LENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRN 329
Query: 313 IV-------------------------------PNDITFVGVLSACCHAGFIDVGRQIFG 341
V P D T V VLSAC G +DVGR ++
Sbjct: 330 AVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYD 389
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
+ + +E + +D+ +CG V A L + M K +VV W ++ A HG
Sbjct: 390 AYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDK-NVVSWNTMIVAHALHGQS 448
Query: 402 EVAERVVKEIIAL 414
E A + ++ A+
Sbjct: 449 EEALHLFQKFKAI 461
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 140/281 (49%), Gaps = 13/281 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + K+I M I+D ++ + +++ A + GDL A +LF I + N W
Sbjct: 280 KCGCVASAKEIFDGM----PIKDVYSWTSMVS--AYAKCGDLENAGKLFKEIPNRNAVSW 333
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH-THVS 142
+ ++ A + + P++A+ ++ +M G P T VL AC+ + L+ + ++ ++
Sbjct: 334 SCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIV 393
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
++L +++ N + ++ D+ A ++F + ++ + W TMI +A ++ EAL
Sbjct: 394 SHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALH 453
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAILGTALVH 259
LF + G P+ +T VLSAC+ SG + G + F +M+ G E A ++
Sbjct: 454 LFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGR--YHFKEMKIVYGIEPRAEHYACMID 511
Query: 260 MYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAE 299
+ K G L +A + SMP + A W A+++ HG+ E
Sbjct: 512 LLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVE 552
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 259/481 (53%), Gaps = 86/481 (17%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP--NHFMWNTLI 87
++++HAQ++ + AA+RL++ AL L + R+F++I+ P + F+ NT++
Sbjct: 367 HVRELHAQVLKQGLHLNPRAAARLVSAYALLRL--LPSSRRVFDAIRDPHADAFLANTML 424
Query: 88 RAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
RA A P A+ + M RR F T++F++KA S + + +H+HV K G
Sbjct: 425 RAYALGGAPRDALAAFSAMPRRDSF-----TYSFLIKALSAA-GVAPVRAVHSHVVKLGS 478
Query: 147 DLDLHVVNCLVRCYSVSS-------------------------------DLNNARQVFDE 175
D V N L+ YS + +L AR++FDE
Sbjct: 479 VEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDE 538
Query: 176 IRN-------------------------------RTLNVWTTMISGYAQSFRANEALMLF 204
+ R + W+TM+SGY + A ++F
Sbjct: 539 MPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIF 598
Query: 205 DQM----------LME--GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
D+M +M+ E + + S+L+ACA+SG L LG+++H +V+ R
Sbjct: 599 DKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTH 658
Query: 253 LGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+ AL+ M+ K G + +A +FD+ +++ +WN++I G A HGH ++AL+LF +++++
Sbjct: 659 VCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQ 718
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
P+ +T + VLSAC H GF+D GR+ F +M+R YGI P+IEHYGCM+DLLGR G + E
Sbjct: 719 GFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKE 778
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
A +LIK M W+P+ V+WG+LL+AC+ H N+E AE V E+ L+P+N G Y VLSN+YAE
Sbjct: 779 AVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAE 838
Query: 432 A 432
A
Sbjct: 839 A 839
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 221/401 (55%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+QIH + + I D F A+ L+ S SG + A LF + + WN ++
Sbjct: 1026 RQIHVHALKTGNIADSFVATTLID--VYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYI 1083
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ KA+ L+ + ++G +Q T KAC + L+ KQIH H K+G D DLH
Sbjct: 1084 IGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLH 1143
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + ++ Y D+ NA VF+ I WT+MISG + ++AL ++ +M
Sbjct: 1144 VNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSR 1203
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+ T A+++ A + LE G ++H V +GT+LV MY K G + A
Sbjct: 1204 VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAY 1263
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LF M RNIA WNAM+ GLA HG+AEEA++LF+ ++ I P+ ++F+G+LSAC HAG
Sbjct: 1264 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 1323
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ SM YGIEP+IEHY C+VD LGR G V EA+++I+ M +K + AL
Sbjct: 1324 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRAL 1383
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L AC+ G++E +RV + ALEP + YV+LSN+YA A
Sbjct: 1384 LGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAA 1424
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 202/402 (50%), Gaps = 15/402 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+H + S D A+ L+ S G +A +FN ++ + WN++I + A
Sbjct: 924 KQVHGIAVKSGLDSDVSVANSLVNM--YSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 981
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN-VRSLNCCKQIHTHVSKSGLDLDL 150
S ++++ L++++ G P+ T VL+ACS+ + LN +QIH H K+G D
Sbjct: 982 QSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADS 1041
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V L+ YS S + A +F + L W M+ GY +AL LF +
Sbjct: 1042 FVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKS 1101
Query: 211 GFEPNSVTLASVLSACAQSGCLEL---GEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
G + + +TLA+ AC GCL L G+++H GF+ + + ++ MY K G +
Sbjct: 1102 GEKSDQITLATAAKAC---GCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM 1158
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A +F+ + + W +MISG +G+ ++AL ++ ++ + +++P++ TF ++ A
Sbjct: 1159 VNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 1218
Query: 328 CHAGFIDVGRQIFGSMKRVYGI-EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
++ GRQ+ ++ ++ + +P + +VD+ +CG + +A L K+M + ++
Sbjct: 1219 SCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIA 1275
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+W A+L HGN E A + K + + +EP+ +LS
Sbjct: 1276 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 1317
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 175/347 (50%), Gaps = 3/347 (0%)
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+YA +L S +P+ F WN + + + AI ++NM + T VL A
Sbjct: 855 AYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAV 914
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ L KQ+H KSGLD D+ V N LV YS AR+VF+++++ L W
Sbjct: 915 AGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWN 974
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ-SGCLELGEKVHVFVKM 244
+MIS AQS E++ LF +L EG +P+ TLASVL AC+ L + ++HV
Sbjct: 975 SMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALK 1034
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G + + T L+ +Y+K+G + +A+ LF + + ++A WNAM+ G ++AL+L
Sbjct: 1035 TGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALEL 1094
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F + K + IT AC +D G+QI + G + + ++D+
Sbjct: 1095 FSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKA-GFDSDLHVNSGILDMYI 1153
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+CG ++ A ++ + PD V W ++++ C ++GN + A R+ +
Sbjct: 1154 KCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 1199
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 188/453 (41%), Gaps = 93/453 (20%)
Query: 27 SMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
S H L K HA++++S DHF ++ LL S G LS A ++F++ + W
Sbjct: 633 STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTM--YSKCGSLSSARQVFDTTPERDLVTW 690
Query: 84 NTLIRAQASSL-----NPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
N ++ A A+S+ N + + L+ +R + + + T VLK C N L + +H
Sbjct: 691 NAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVH 750
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ K GL+ D+ V LV YS + +AR +FD +R R + +W M+ GY Q
Sbjct: 751 GYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEK 810
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQ------------------------------ 228
EA LF + G P+ ++ +L+ ++
Sbjct: 811 EAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVF 870
Query: 229 ------SGCLELGEK---VHVFVKMRGFE-----------MGAILGT------------- 255
S CL G+ + FV M G + A+ GT
Sbjct: 871 CWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIA 930
Query: 256 -------------ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+LV+MY+K G A+ +F+ M ++ +WN+MIS A EE++
Sbjct: 931 VKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESV 990
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFID---VGRQIFGSMKRVYGIEPKIEHYGCM 359
+LF L E + P+ T VL AC + ID + RQI + I +
Sbjct: 991 NLFIDLLHEGLKPDHFTLASVLRAC--SSLIDGLNISRQIHVHALKTGNIADSFV-ATTL 1047
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+D+ + GK+ EAE L + D+ W A++
Sbjct: 1048 IDVYSKSGKMEEAEFLFQNKD-DLDLACWNAMM 1079
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+L+ + +L K H + SG D + N L+ YS L++ARQVFD R
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 181 LNVWTTMISGYAQSFRAN-----EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
L W ++ YA S +N E L LF + +TLA VL C SGCL
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
E VH + G E + ALV++Y+K G + A+ LFD M ER++ WN M+ G
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
G +EA LF + + + P++ + +L+
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNG 837
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L LG+ H + + G L L+ MY+K G+L+ A+ +FD+ PER++ TWNA++
Sbjct: 637 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 696
Query: 292 LAS-----HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
A+ G+A+E L LFR L +T VL C ++G + + G ++
Sbjct: 697 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 756
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
G+E + G +V++ +CG++ +A L M + DVV+W +L G + A +
Sbjct: 757 -GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMMLKGYVQLGLEKEAFQ 814
Query: 407 VVKEI--IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPD 462
+ E L P+ V ++L N +E + + VQ A L+ + D NPD
Sbjct: 815 LFSEFHRSGLRPDEFSVQLIL-NGVSEVNWDEGKWLADQVQAYAAKLSLSDD---NPD 868
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 194/299 (64%)
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+++H+ ++G + + V N LV Y+ +A ++F+ + R L W ++I+GYA +
Sbjct: 15 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALN 74
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
R NEAL LF +M + G EP+ T+ S+LSACA+ G L LG + HV++ G + G
Sbjct: 75 GRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAG 134
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ +Y K G++ +A +FD M E+++ +W ++I GLA +G +EAL+LF++LE++ ++
Sbjct: 135 NALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLM 194
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P++ITFVGVL AC H G +D G F MK YGI PKIEHYGCMVDLLGR G V +A E
Sbjct: 195 PSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHE 254
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
I+ M +P+ V+W LL AC HG++ + E +++ LEP + G YV+LSN+YA +
Sbjct: 255 FIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQ 313
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 8/243 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
++ G A +LF + N WN++I A + P++A+ L+ M G P+ T
Sbjct: 41 AACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMV 100
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L AC+ + +L ++ H ++ K GLD +LH N L+ Y+ + A +VFDE+ +
Sbjct: 101 SLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEK 160
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
++ WT++I G A + EAL LF ++ +G P+ +T VL AC+ G ++ G
Sbjct: 161 SVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG--FD 218
Query: 240 VFVKMRGFEMGAILGT----ALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLAS 294
F +M+ E G + +V + + G + +A +MP + N W ++
Sbjct: 219 YFKRMKE-EYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTI 277
Query: 295 HGH 297
HGH
Sbjct: 278 HGH 280
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 2/177 (1%)
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
GEKVH GFE + LVHMY G A LF+ M ERN+ TWN++I+G A
Sbjct: 14 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 73
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
+G EAL LFR++ + P+ T V +LSAC G + +GR+ M +V G++ +
Sbjct: 74 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKV-GLDGNLH 132
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++DL +CG + +A ++ M K VV W +L+ +G + A + KE+
Sbjct: 133 AGNALLDLYAKCGSIRQAHKVFDEMEEK-SVVSWTSLIVGLAVNGFGKEALELFKEL 188
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 220/385 (57%), Gaps = 13/385 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFM-------WNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
S G L A +FNS HF+ WN +I S +KA+ L+ M +
Sbjct: 318 SKCGSLQEARSIFNS-----HFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIY 372
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD-LHVVNCLVRCYSVSSDLNNARQ 171
+ +T+ V A + ++ L+ K++H KSGL+++ + + N + Y+ L + R+
Sbjct: 373 LDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRK 432
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VF+ + +R L WT++++ Y+Q ++A+ +F M EG PN T +SVL +CA
Sbjct: 433 VFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCL 492
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LE G++VH + G +M + +ALV MY K G L AK +F+ + + +W A+I+G
Sbjct: 493 LEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAG 552
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HG ++AL LFR++ + + PN +TF+ VL AC H G ++ G Q F MK+ YG+ P
Sbjct: 553 HAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVP 612
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
++EHY C+VDLL R G + +A E I RM +P+ ++W LL AC+ HGN+E+ E ++I
Sbjct: 613 EMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKI 672
Query: 412 IALEPNNHGVYVVLSNMYAEAESMK 436
++ + N YV+LSN Y E+ S K
Sbjct: 673 LSFKAENSATYVLLSNTYIESGSYK 697
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 180/389 (46%), Gaps = 10/389 (2%)
Query: 13 LPIPPLSLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAFC-ALSSSGDLSYA 68
L I PL L C + + Q K +H ++ S+ +H + L A S D+ A
Sbjct: 66 LQIQPLVDLLRDCVDARFLKQAKTVHG-FLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAA 124
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
RLF+ + N F W LI A + + M+ G P+Q ++ +L+ C +
Sbjct: 125 CRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGL 184
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
S+ +H + G V L+ Y+ ++ ++ +VF+ + + W MI
Sbjct: 185 DSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMI 244
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+G+ + +A LF +M+ EG P++ T V A + ++V + G +
Sbjct: 245 TGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVD 304
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDS--MPERNIATWNAMISGLASHGHAEEALDLFR 306
++GTAL+ M +K G+L +A+++F+S + R A WNAMISG G E+AL+LF
Sbjct: 305 SNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFA 364
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK-IEHYGCMVDLLGR 365
K+ + I + T+ V +A + +G+++ + G+E + + + +
Sbjct: 365 KMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKS-GLEVNYVSISNAVANAYAK 423
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAA 394
CG + + ++ RM D++ W +L+ A
Sbjct: 424 CGSLEDVRKVFNRME-DRDLISWTSLVTA 451
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 237/401 (59%), Gaps = 3/401 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
LK++H + + + A+ +A + + G LSYA R+F+ I+S WN LI
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVA--SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A S +P ++ ++ M+ +G P+ T +L ACS ++SL K++H + ++ L+ DL
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V ++ Y +L + +FD + +++L W T+I+GY Q+ + AL +F QM++
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G + +++ V AC+ L LG + H + E A + +L+ MY KNG++ ++
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 651
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F+ + E++ A+WNAMI G HG A+EA+ LF ++++ P+D+TF+GVL+AC H+
Sbjct: 652 SKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI-KRMVWKPDVVMWG 389
G I G + MK +G++P ++HY C++D+LGR G++ +A ++ + M + DV +W
Sbjct: 712 GLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 771
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+LL++C+ H N+E+ E+V ++ LEP YV+LSN+YA
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 205/415 (49%), Gaps = 18/415 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
K K + ++IH + S+R++ D +R++ A+ S D S +F++++S N F
Sbjct: 96 KRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF--VFDALRSKNLFQ 153
Query: 83 WNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WN +I + + + D+ + ++ M T P+ T+ V+KAC+ + + +H V
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K+GL D+ V N LV Y + +A Q+FD + R L W +MI ++ + + E+
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 202 MLFDQMLME----GFEPNSVTLASVLSACAQSGCLELGEKVHVF-VKMRGFEMGAILGTA 256
+L +M+ E F P+ TL +VL CA+ + LG+ VH + VK+R + +L A
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR-LDKELVLNNA 332
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EKEQIV 314
L+ MY+K G + A+ +F +N+ +WN M+ G ++ G D+ R++ E +
Sbjct: 333 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 392
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
+++T + + C H F+ +++ S+K+ + + + V +CG + A+
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQ 450
Query: 374 ELIKRMVWKPDVVMWGALLA--ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
+ + K V W AL+ A N + + + +I L P++ V +LS
Sbjct: 451 RVFHGIRSKT-VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 170/358 (47%), Gaps = 12/358 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHT 117
S G ++ A +F + N WNT++ ++ + + M G ++ T
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ C + L K++H + K + V N V Y+ L+ A++VF IR
Sbjct: 398 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 457
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
++T+N W +I G+AQS +L QM + G P+S T+ S+LSAC++ L LG++
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH F+ E + +++ +Y G L +ALFD+M ++++ +WN +I+G +G
Sbjct: 518 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 577
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH-- 355
+ AL +FR++ I I+ + V AC + +GR+ Y ++ +E
Sbjct: 578 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDA 632
Query: 356 -YGC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
C ++D+ + G + ++ ++ + K W A++ HG + A ++ +E+
Sbjct: 633 FIACSLIDMYAKNGSITQSSKVFNGLKEKS-TASWNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 154/328 (46%), Gaps = 25/328 (7%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ +L+A + + ++IH VS S L D + ++ Y++ +++R VF
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCL 232
D +R++ L W +IS Y+++ +E L F +M+ P+ T V+ ACA +
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+G VH V G +G ALV Y +G + A LFD MPERN+ +WN+MI
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 293 ASHGHAEEALDLFRKLEKEQ----IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
+ +G +EE+ L ++ +E +P+ T V VL C I +G+ + G ++
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR- 322
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
++ ++ ++D+ +CG + A ++I +M +VV W ++
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG-------------- 367
Query: 409 KEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ E + HG + VL M A E +K
Sbjct: 368 ---FSAEGDTHGTFDVLRQMLAGGEDVK 392
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 113/236 (47%), Gaps = 12/236 (5%)
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV----KMRGFE 248
+SFR + + D+ + F L +L A + +E+G K+H V ++R +
Sbjct: 61 KSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDD 120
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF-RK 307
+L T ++ MY G+ ++ +FD++ +N+ WNA+IS + + +E L+ F
Sbjct: 121 ---VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ ++P+ T+ V+ AC + +G + G + + G+ + +V G G
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNALVSFYGTHG 236
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
V +A +L M + ++V W +++ ++G E + ++ E+ +E N G ++
Sbjct: 237 FVTDALQLFDIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEM--MEENGDGAFM 289
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 231/411 (56%), Gaps = 9/411 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLL---AFCALSSSGDLSYATRLFNSIQSPNH 80
+ ++HQ K IHA I + + + LL A C L L YA ++FN++ N
Sbjct: 222 QANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHL-----LFYARKIFNTVNKKND 276
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
W+ +I + A+ LY +M G P T +L+AC+ + L K++H
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
H+ KSG+DLD V N L+ Y+ ++NA DE+ + ++ +ISG Q+ A +
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEK 396
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL++F QM G P T+ ++L AC+ L+ G H + +RGF + A++
Sbjct: 397 ALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIID 456
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY+K G + ++ +FD M R+I +WN MI G HG EAL LF++L+ + P+D+T
Sbjct: 457 MYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVT 516
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+ VLSAC H+G + G+ F SM + + I+P++ HY CMVDLL R G + EA I+RM
Sbjct: 517 LIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRM 576
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ P+V +WGALLAAC+ H NIE+ E+V K+I L P G +V++SN+Y+
Sbjct: 577 PFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYS 627
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 189/374 (50%), Gaps = 10/374 (2%)
Query: 43 RIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFL 102
R+ D AA+ LA +S + ++ A +F+ I P+ +WN +IR A S ++I+L
Sbjct: 36 RVSDSDAAATQLARYHISRN-EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYL 94
Query: 103 YMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV 162
Y++M + G P TF F+LKACS++++L + IHTH GL +DL+V L+ Y+
Sbjct: 95 YLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAK 154
Query: 163 SSDLNNARQVFDEI--RNRTLNVWTTMISGYAQSFRANEALMLFD--QMLMEGFEPNSVT 218
L A+ +F+ I ++R + W MI+ + SF A A + QM G PNS T
Sbjct: 155 CGHLYQAQTLFNSISHQDRDIVAWNAMIAAF--SFHALHAQTIHSVAQMQQAGVTPNSST 212
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
L S+L Q+ L G+ +H + F +L TAL+ MY K L A+ +F+++
Sbjct: 213 LVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN 272
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRK-LEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
++N W+AMI G H +AL L+ L + P T +L AC + G+
Sbjct: 273 KKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGK 332
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
++ M + G++ ++ + +CG + A + M+ K D V + A+++ C
Sbjct: 333 KLHCHMIKS-GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAK-DTVSYSAIISGCVQ 390
Query: 398 HGNIEVAERVVKEI 411
+G E A + +++
Sbjct: 391 NGYAEKALLIFRQM 404
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 236/406 (58%), Gaps = 8/406 (1%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H +++ S QD F A++L+ G + A ++F+ + ++WN L RA A
Sbjct: 100 VHRRLVSSGFDQDPFLATKLINM--YYELGSIDRARKVFDETRERTIYVWNALFRALAMV 157
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS----NVRSLNCCKQIHTHVSKSGLDLD 149
+ + LY+ M G ++ T+TFVLKAC +V L K+IH H+ + G + +
Sbjct: 158 GCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEAN 217
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+HV+ L+ Y+ ++ A VF + + W+ MI+ +A++ +AL LF M++
Sbjct: 218 IHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMML 277
Query: 210 EGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
E + PNSVT+ +VL ACA LE G+ +H ++ RG + + AL+ MY + G +
Sbjct: 278 EAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEI 337
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+ +FD+M R++ +WN++IS HG ++A+ +F + + P+ I+F+ VL AC
Sbjct: 338 LMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGAC 397
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAG ++ G+ +F SM Y I P +EHY CMVDLLGR ++ EA +LI+ M ++P +
Sbjct: 398 SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTV 457
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
WG+LL +C+ H N+E+AER + LEP N G YV+L+++YAEA+
Sbjct: 458 WGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAK 503
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 182/372 (48%), Gaps = 22/372 (5%)
Query: 47 HFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM 106
H ++ ++F +L+ S +L N I+ N N LI++ N +AI L
Sbjct: 24 HVSSRVPVSFVSLNPSANL------MNDIKGNN----NQLIQSLCKGGNLKQAIHLLC-- 71
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
P Q TF ++ +C+ SL+ +H + SG D D + L+ Y +
Sbjct: 72 --CEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSI 129
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+ AR+VFDE R RT+ VW + A E L L+ QM G + T VL AC
Sbjct: 130 DRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKAC 189
Query: 227 AQSGC----LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
S L+ G+++H + G+E + T L+ +Y K G+++ A ++F +MP +N
Sbjct: 190 VVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNF 249
Query: 283 ATWNAMISGLASHGHAEEALDLFR--KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
+W+AMI+ A + +AL+LF+ LE VPN +T V VL AC ++ G+ I
Sbjct: 250 VSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIH 309
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
G + R G++ + ++ + GRCG++L + + M + DVV W +L++ HG
Sbjct: 310 GYILR-RGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNR-DVVSWNSLISIYGMHGF 367
Query: 401 IEVAERVVKEII 412
+ A ++ + +I
Sbjct: 368 GKKAIQIFENMI 379
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 237/407 (58%), Gaps = 19/407 (4%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA- 89
++ +H+ ++ ++D F + L+ A S +G S A ++F+ + + WNT + A
Sbjct: 24 VRAVHSHVVKLGSVEDTFVGNALID--AYSKNGGFSDARKVFDEMPERDVVSWNTAMAAM 81
Query: 90 -QASSLNPDKAIFLYMNMRRTGFAPNQHTFTF--VLKACSNVRSLNCCKQIHTHVSKSGL 146
+ L + +F M P + T ++ +L + + ++ + +
Sbjct: 82 VREGELAGVRKLFDEM--------PEKDTVSWNTILDGYTKAGEVEAAFELFQRMPER-- 131
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
++ + +V Y DL AR +FD++ ++ L WT M+S AQ +EA LF Q
Sbjct: 132 --NVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQ 189
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M E + + S+L+ACA+SG L LG+++H +V+ R + AL+ M+ K G
Sbjct: 190 MKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGC 249
Query: 267 LAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ +A +FD+ +++ +WN++I G A HGH ++AL+LF +++++ P+ +T + VLS
Sbjct: 250 VNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLS 309
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H GF+D GR+ F +M+R YGI P+IEHYGCM+DLLGR G + EA +LIK M W+P+
Sbjct: 310 ACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNE 369
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
V+WG+LL+AC+ H N+E AE V E+ L+P+N G Y VLSN+YAEA
Sbjct: 370 VIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEA 416
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 17/295 (5%)
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
RR F T++F++KA S + + +H+HV K G D V N L+ YS +
Sbjct: 3 RRDSF-----TYSFLIKALSAA-GVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGF 56
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
++AR+VFDE+ R + W T ++ + LFD+M E ++V+ ++L
Sbjct: 57 SDARKVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMP----EKDTVSWNTILDGY 112
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
++G E+ +F +M E + + +V Y K G L A+ +FD MP +N+ TW
Sbjct: 113 TKAG--EVEAAFELFQRMP--ERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWT 168
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KR 345
M+S A G +EA LF ++++ + + V +L+AC +G + +G++I + KR
Sbjct: 169 IMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKR 228
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
G + ++D+ +CG V A+ + + D V W +++ HG+
Sbjct: 229 NLGRSTHV--CNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGH 281
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 229/404 (56%), Gaps = 5/404 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIH + S +H S L+ F S GD+ ++ + + + N LI
Sbjct: 422 KQIHCLAMKHSICSNHAVGSSLIDF--YSKHGDVESCRKVLAQVDASSIVPRNVLIAGLV 479
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG-LDLDL 150
+ D+AI L+ + R G P+ TF+ +L C+ + S KQ+H + KSG L+ D
Sbjct: 480 QNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDT 539
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEI-RNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
V LV Y + +A ++ E+ ++ L WT ++SGYAQ+ + ++L+ F +M
Sbjct: 540 SVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRS 599
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
P+ VT AS+L AC++ L G+++H + GF +A++ MY+K G +
Sbjct: 600 YDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIIS 659
Query: 270 AKALFDSMPER-NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+ F + + +I WN+MI G A +G+A+EAL LF+K++ QI +++TF+GVL AC
Sbjct: 660 SFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACA 719
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
HAG I GR F SM +VYGI P+++HY C +DLLGR G + EA+E+I + ++PD V+W
Sbjct: 720 HAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIW 779
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LAAC+ H + E E KE++ LEP N YV+LSNMYA A
Sbjct: 780 ATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAA 823
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 145/285 (50%), Gaps = 2/285 (0%)
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFM-WNTLIRAQASSLNPDKAIF-LYMNMRRTGFAPN 114
CAL++ G L A L + + +P+ + WN +I A + +F LY +MR G P
Sbjct: 140 CALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPT 199
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ TF +L A +N + +Q+H + GLD ++ V + L+ Y+ + +A VFD
Sbjct: 200 RSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFD 259
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
+ + +W M++G ++ EA+ +F M G E + T SVL ACA L
Sbjct: 260 CSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCL 319
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G +V + + A + M++K GA+ AK LF+ + ++ +WNA++ GL
Sbjct: 320 GRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTH 379
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
+ EEA+ + + + + + P++++F V++AC + + G+QI
Sbjct: 380 NEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQI 424
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 175/373 (46%), Gaps = 12/373 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+HA + + F S L+ A G + A +F+ N MWN ++
Sbjct: 220 RQVHAAAVRHGLDANVFVGSSLINLYA--KCGCIGDAILVFDCSGEKNVVMWNAMLNGLV 277
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +AI +++ M+R G ++ T+ VL AC+++ S +Q+ K+ +D L
Sbjct: 278 RNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLF 337
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N + +S +++A+ +F+ I + W ++ G + EA+ + M ++G
Sbjct: 338 VANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDG 397
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+ V+ A+V++AC+ E G+++H +G++L+ Y+K+G + +
Sbjct: 398 VTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCR 457
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+ + +I N +I+GL + +EA+DLF+++ ++ + P+ TF +LS C G
Sbjct: 458 KVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGC--TG 515
Query: 332 FIDVGRQIFGSMKRVYGIEPKI--EHYGCMVDLLGRCGKVLEAEELIKRMVWKPD---VV 386
+ I G Y ++ + V L+G K E+ K ++ PD +V
Sbjct: 516 LLS---SIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLV 572
Query: 387 MWGALLAACKNHG 399
W A+++ +G
Sbjct: 573 EWTAIVSGYAQNG 585
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 122/285 (42%), Gaps = 39/285 (13%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA 169
G P+Q L ACS + +L KQ H K GL LV Y+ + +A
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
R+VF I W +MISGY ++ R EA+ LF +M G P+ VT +V+ A
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCAL--- 142
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE-RNIATWNAM 288
TAL G L A+ L MP + WNA+
Sbjct: 143 -------------------------TAL-------GRLEDARTLLHRMPAPSSTVAWNAV 170
Query: 289 ISGLASH-GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
ISG A G E L++ + + P TF +LSA +A GRQ+ + R +
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVR-H 229
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
G++ + +++L +CG + +A L+ + +VVMW A+L
Sbjct: 230 GLDANVFVGSSLINLYAKCGCIGDA-ILVFDCSGEKNVVMWNAML 273
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 239/431 (55%), Gaps = 14/431 (3%)
Query: 25 CKSMHQLKQIHAQMIISSR-IQDHFA-ASRLLAFC---ALSSSGDLSYATRLFNSIQSPN 79
C S+ L Q+HA + + +Q H A +RLL C + L+YA ++F+ I P
Sbjct: 38 CTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPG 97
Query: 80 HFMW-NTLIRAQASSLNPDKAIF----LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+W NTL+R A +++ M G AP+ +TF +LKAC++ R+
Sbjct: 98 DVIWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEG 157
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+Q H K+G +V L+ Y+ D+ AR +FD + + + MI+ +S
Sbjct: 158 RQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRS 217
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EAL+LF +M +G +P SVTL SVLSACA G LELG +H +++ + +
Sbjct: 218 SLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVN 277
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
TAL+ MY K G+L A +F M R+ W+ M+ A+HG+ EA+ +F +++K+ +
Sbjct: 278 TALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK 337
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+D+TF+GVL AC H+G + G Q F SM R YGI I+HYGC+ DLL R G++ A +
Sbjct: 338 PDDVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYK 396
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA-- 432
I + KP ++W LL+AC HG++++ +RV + I+ L+ ++ G YV+ SN+ A
Sbjct: 397 FIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGR 456
Query: 433 -ESMKMQLEIL 442
E M M +++
Sbjct: 457 WEEMNMVRKLM 467
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 17/290 (5%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLH---VVNCLVRCYSVSSD----LNNARQVFD 174
L C+++R+L Q+H K+G L H V L C ++ L ARQVFD
Sbjct: 35 LPHCTSLRAL---AQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFD 91
Query: 175 EIRNRTLNVWTTMI-----SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
I + +W + G A EA +F +M+ EG P++ T S+L ACA +
Sbjct: 92 RIPHPGDVIWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASA 151
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
E G + H G + L++MY + G + A+ +FD M + ++NAMI
Sbjct: 152 RAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMI 211
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
+ EAL LFR+++ + + P +T + VLSAC G +++GR I ++++ +
Sbjct: 212 TASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMR-L 270
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ ++ ++D+ +CG + +A + + M + D W ++ A NHG
Sbjct: 271 DSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR-DKQAWSVMMVAYANHG 319
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 237/421 (56%), Gaps = 14/421 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+ + KC S Q+KQ+ + + + Q F SRLL CA+S GDLS+A ++F I
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP------NQHTFTFVLKACSNVRSL 131
P WN +IR A S +P A Y +M + + + T +F LKAC+
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCS 125
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ Q+H +++ GL D + L+ YS + DL +A ++FDE+ R + W +I+G
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGL 185
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM-G 250
RA+EA+ L+ +M EG + VT+ + L AC+ G ++ GE + G+
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI-----FHGYSNDN 240
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLE 309
I+ A + MY+K G + KA +F+ ++++ TWN MI+G A HG A AL++F KLE
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
I P+D++++ L+AC HAG ++ G +F +M G+E ++HYGC+VDLL R G++
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRL 359
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EA ++I M PD V+W +LL A + + ++E+AE +EI + NN G +V+LSN+Y
Sbjct: 360 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 419
Query: 430 A 430
A
Sbjct: 420 A 420
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 241/434 (55%), Gaps = 11/434 (2%)
Query: 6 SSLRQPPLPIPPLSLLA--DKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALS 60
+S+R+ L +L++ C S+ + +Q H + I D ++ LLA A +
Sbjct: 193 NSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAET 252
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS-LNPDKAIFLYMNMRRTGFAPNQHTFT 119
S L+ ++F+ + + WNT+I A A S + +AI +++ M R G++PN+ TF
Sbjct: 253 SR--LAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFI 310
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L S++ + QIH + K + D + N L+ CY S ++ N ++F + R
Sbjct: 311 NLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER 370
Query: 180 TLNV-WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
V W +MISGY + +A+ L M+ G + T A+VLSACA LE G +V
Sbjct: 371 RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEV 430
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H E ++G+ALV MY+K G + A F+ MP RN+ +WN+MISG A HGH
Sbjct: 431 HACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHG 490
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
+ AL LF +++ +P+ ITFVGVLSAC H G +D G + F SM VYG+ P++EHY C
Sbjct: 491 DNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSC 550
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC--KNHGNIEVAERVVKEIIALEP 416
MVDLLGR G++ + E I +M KP++++W +L AC N E+ R + + ++P
Sbjct: 551 MVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDP 610
Query: 417 NNHGVYVVLSNMYA 430
N YV+LSNMYA
Sbjct: 611 QNAVNYVLLSNMYA 624
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 165/335 (49%), Gaps = 4/335 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GD A +LF+ + N W LI + P+ A + M GF PN+ F +
Sbjct: 49 GDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAI 108
Query: 123 KAC-SNVRSLNCCKQIHTHVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+AC ++ +Q+H + ++GL D + V N L+ Y+ D+++AR VF + ++
Sbjct: 109 RACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKD 168
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W +MI+G Q+ +A+ ++ M G P++ L S LS+CA GC+ LG++ H
Sbjct: 169 SVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHG 228
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA-E 299
G +M + L+ +Y + LA+ + +F M ER+ +WN +I LA G +
Sbjct: 229 EGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVS 288
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA+++F ++ + PN +TF+ +L+ + QI + + Y ++ +
Sbjct: 289 EAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILK-YNVKDDNAIENAL 347
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ G+ G++ EE+ RM + D V W ++++
Sbjct: 348 LACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 382
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 136/265 (51%), Gaps = 4/265 (1%)
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
H +V K G D DL + N L+ Y D +AR++FDE+ +R W +ISGY Q+
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL-GEKVHVFVKMRGFEMGAI-LG 254
+A + +M+ EGF PN S + AC +S G +VH + G + +G
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
L++MY K G + A+++F M +++ +WN+MI+GL + E+A+ + + K ++
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P++ + LS+C G I +G+Q G ++ G++ + ++ L ++ E ++
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKL-GLDMDVSVSNTLLALYAETSRLAECQK 260
Query: 375 LIKRMVWKPDVVMWGALLAACKNHG 399
+ M+ + D V W ++ A + G
Sbjct: 261 VFSWML-ERDQVSWNTVIGALADSG 284
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 221/375 (58%), Gaps = 15/375 (4%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT------FV 121
A R F+ I PN ++ A AS + ++ + + R A + +
Sbjct: 3 ARRAFDEIPDPN----PVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVA 58
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV--SSDLNNARQVFDEIRNR 179
A + V +H ++K G + + VVN ++ Y+ S DL AR+VFD + R
Sbjct: 59 FSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ER 117
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLM--EGFEPNSVTLASVLSACAQSGCLELGEK 237
+ W +MI+ YAQ+ + EA+ L+ +ML G + N+V L++VL ACA +G ++ G+
Sbjct: 118 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKH 177
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H V G E +GT++V MY+K G + A F + E+NI +W+AMI+G HG
Sbjct: 178 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 237
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EAL++F ++++ + PN ITF+ VL+AC HAG +D GR + +MK+ +GIE +EHYG
Sbjct: 238 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 297
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLLGR G + EA LIK M KPD +WGALL+AC+ H N+E+AE VK + L+ +
Sbjct: 298 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS 357
Query: 418 NHGVYVVLSNMYAEA 432
N G YV+LSN+YAEA
Sbjct: 358 NSGYYVLLSNIYAEA 372
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 128/258 (49%), Gaps = 11/258 (4%)
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
+AR+ FDEI + + T M SGY ++ +L LF M+ A++++ A
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 228 QSGCLELG--EKVHVFVKMRGFEMGAILGTALVHMYTKNGA--LAKAKALFDSMPERNIA 283
+ + G +H + GFE A + ++ Y K G+ L A+ +FD+M ER++
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVV 120
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEK--EQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+WN+MI+ A +G + EA+ L+ K+ I N + VL AC HAG I G+ I
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
+ R+ G+E + +VD+ +CG+V A +++ K +++ W A++ HG
Sbjct: 181 QVVRM-GLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEK-NILSWSAMITGYGMHGRG 238
Query: 402 EVAERVVKEII--ALEPN 417
+ A + E+ L PN
Sbjct: 239 QEALEIFTEMKRSGLRPN 256
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 11/222 (4%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K IH Q++ ++ + + ++ S G + A+R F I+ N W+ +I
Sbjct: 176 KHIHNQVVRMGLEENVYVGTSIVDM--YSKCGRVEMASRAFRKIKEKNILSWSAMITGYG 233
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS-GLDLDL 150
+A+ ++ M+R+G PN TF VL ACS+ L+ + + + + G++ +
Sbjct: 234 MHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGV 293
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNR-TLNVWTTMISGYAQSFRANEALMLFDQMLM 209
C+V + L+ A + E++ + +W ++S + R ++ + L + +
Sbjct: 294 EHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLS----ACRIHKNVELAEMSVK 349
Query: 210 EGFE---PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
FE NS + + A++G + E++ + VK R E
Sbjct: 350 RLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIE 391
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 204/341 (59%), Gaps = 3/341 (0%)
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S + PD F Y M R P++ +F+ +L++C+ + H + K G + D+
Sbjct: 8 SGVCPDFLGF-YSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMI 66
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLN--VWTTMISGYAQSFRANEALMLFDQMLM 209
+ L+ Y+ + AR +FD + R N W TMIS Y Q A+ +F QM
Sbjct: 67 LQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQS 126
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
E +P VT+ S+LSACA G L++GE +H +++ + ++ +LG AL+ MY K GAL
Sbjct: 127 ENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEA 186
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A +F + +NI WN++I GL +G EEA+ F +EKE I P+ +TFVG+LS C H
Sbjct: 187 AIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSH 246
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+G + G++ F M VYG+EP +EHYGCMVDLLGR G + EA ELI+ M KP+ ++ G
Sbjct: 247 SGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLG 306
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+LL AC+ H + ++ E+V ++++ L+P + G YV LSN+YA
Sbjct: 307 SLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYA 347
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 13/291 (4%)
Query: 8 LRQPPLPIP-PLSLLADKC--KSMHQLKQ-IHAQMIISSRIQDHFAASRLLAFCALSSSG 63
LR LP SL+ C QL + H Q++ D + LL F A G
Sbjct: 22 LRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYA--KHG 79
Query: 64 DLSYATRLFNSI--QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
+ A LF+++ ++ N WNT+I A AI ++ M+ P + T +
Sbjct: 80 YVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSL 139
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC+++ +L+ + IH ++ L +D+ + N L+ Y L A VF + + +
Sbjct: 140 LSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNI 199
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV- 240
W ++I G + R EA+ F M EG +P+ VT +LS C+ SG L G++
Sbjct: 200 FCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSE 259
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
+ + G E G +V + + G L +A L +MP + N+M+ G
Sbjct: 260 MLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP----NSMVLG 306
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 232/409 (56%), Gaps = 42/409 (10%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFV 121
G + ++F + + WN LI + A+ ++ M++ + PN+ T
Sbjct: 181 GRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVST 240
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF-------- 173
L AC ++ L K+IH +V + L + + N LV Y L+ AR++F
Sbjct: 241 LSACIALKMLELGKEIHRYV-REQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTV 299
Query: 174 ----------------DEIRN-------RTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
DE R R + +WT MI+GY Q R ++A+ LF +M ++
Sbjct: 300 ICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIK 359
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
P+ TL ++L+ CAQ G LE G+ +H ++ + A++GTAL+ MY K G + K+
Sbjct: 360 RVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKS 419
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F+ + E++ A+W ++I GLA +G +AL+LF ++ + + P+DITF+GVLSAC H
Sbjct: 420 LEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHG 479
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD------ 384
G ++ GR+ F SM VY IEPK+EHYGC++DLLGR G++ EAEELI++ P+
Sbjct: 480 GLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEK---SPNVNNEVI 536
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
V ++GALL+AC+ HGN+E+ ERV K ++ +E + V+ +L+N+YA A+
Sbjct: 537 VPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASAD 585
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 225/467 (48%), Gaps = 71/467 (15%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
L CKSM LKQI Q++ + Q ++ + C S G+L YA R+FN I P
Sbjct: 37 FLLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPG 96
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F++N +I+A + + KA+ L+ +R G +P+ T+ FV KA + + ++++
Sbjct: 97 LFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYG 156
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
V KSGL+ D +V N L+ Y+ + N RQVF+E+ R + W +ISGY + R +
Sbjct: 157 FVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYED 216
Query: 200 ALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR-GFEMGAILGTAL 257
A+ +F +M + PN T+ S LSAC LELG+++H +V+ + GF + +G AL
Sbjct: 217 AVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIK--IGNAL 274
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD-------------- 303
V MY K G L+ A+ +F+ MP + + W +M+SG + G +EA +
Sbjct: 275 VDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWT 334
Query: 304 -----------------LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG----- 341
LFR+++ +++ P+ T V +L+ C G ++ G+ I G
Sbjct: 335 AMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDEN 394
Query: 342 ----------SMKRVYG----IEPKIEHYGCMVDL-----------LGRCGKVLEAEELI 376
++ +Y IE +E + + + L GK +A EL
Sbjct: 395 KIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELF 454
Query: 377 KRMVW---KPDVVMWGALLAACKNHGNIEVAERVVKEIIA---LEPN 417
MV KPD + + +L+AC + G +E + + + A +EP
Sbjct: 455 AEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPK 501
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G L A+ +F+ + + +N +I +G +A+ LFR+L +E + P++ T+ V
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC--MVDLLGRCGKVLEAEELIKRMVWK 382
A G + G +++G + + G+E + Y C ++D+ G+V ++ + M +
Sbjct: 140 KAIGCLGEVREGEKVYGFVVK-SGLE--FDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQR 196
Query: 383 PDVVMWGALLAA---CKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
DVV W L++ C+ + + R +++ +L PN V LS
Sbjct: 197 -DVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLS 242
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 224/386 (58%), Gaps = 9/386 (2%)
Query: 54 LAFCAL----SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT 109
+A C+L + G L A R+FN I+ P+ WN +I A++ D+A+ ++ MR +
Sbjct: 303 IAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNS 362
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCK--QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
GF P+ + +L C+ + + C+ QIH+ + K G DL V N L+ Y+ SDL
Sbjct: 363 GFIPDAISLRSLL--CAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLY 420
Query: 168 NARQVFDEIRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+F++ RN+ +V W +++ Q + E L LF ML+ EP+ +T+ ++L C
Sbjct: 421 CCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 480
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+ L+LG +VH + G + + L+ MY K G+L +A+ +FDSM ++ +W+
Sbjct: 481 VEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWS 540
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
+I G A G EEAL LFR+++ I PN +TFVGVL+AC H G ++ G +++ M+
Sbjct: 541 TLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTE 600
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
+GI P EH C+VDLL R G + EAE I M +PDVV+W LL+ACK GN+++A++
Sbjct: 601 HGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQK 660
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAEA 432
+ I+ ++P N +V+L +M+A +
Sbjct: 661 AAENILKIDPFNSTAHVLLCSMHASS 686
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 175/374 (46%), Gaps = 4/374 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+ Q ++IH ++ S+ D + +L+ G L A +F+ + N + +
Sbjct: 78 RSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGSLRDAREVFDFMPERNLVSYTS 135
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + + +AI LY+ M + P+Q F ++KAC+ + KQ+H V K
Sbjct: 136 VITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLE 195
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
L N L+ Y + +++A +VF I + L W+++I+G++Q EAL
Sbjct: 196 SSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLK 255
Query: 206 QMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+ML G F PN S L AC+ + G ++H AI G +L MY +
Sbjct: 256 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARC 315
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G L A+ +F+ + + A+WN +I+GLA++G+A+EA+ +F ++ +P+ I+ +L
Sbjct: 316 GFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLL 375
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
A + G QI + + G + ++ + C + L + K D
Sbjct: 376 CAQTKPMALCQGMQIHSFIIKC-GFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKAD 434
Query: 385 VVMWGALLAACKNH 398
V W A+L AC H
Sbjct: 435 SVSWNAILTACLQH 448
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 153/307 (49%), Gaps = 5/307 (1%)
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
+ + F T+ ++ ACS+ RSL ++IH H+ S D + N ++ Y L
Sbjct: 56 KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSL 115
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+AR+VFD + R L +T++I+GY+Q+ + EA+ L+ +ML P+ S++ AC
Sbjct: 116 RDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKAC 175
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A +G + LG+++H V I AL+ MY + ++ A +F +P +++ +W+
Sbjct: 176 ACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWS 235
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
++I+G + G EAL +++ + PN+ F L AC D G QI G +
Sbjct: 236 SIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 295
Query: 346 VYGIEPKIEHYGC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ I GC + D+ RCG L++ + + +PD W ++A N+G + A
Sbjct: 296 LELTGNAIA--GCSLCDMYARCG-FLDSARRVFNQIERPDTASWNVIIAGLANNGYADEA 352
Query: 405 ERVVKEI 411
V E+
Sbjct: 353 VSVFSEM 359
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 190/312 (60%), Gaps = 13/312 (4%)
Query: 156 LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPN 215
++ CY+ ++ AR +FD + R W MI GYAQ NE L+LF QML PN
Sbjct: 12 MITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPN 71
Query: 216 SVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFD 275
VT+ +VLSAC Q+G LE G VH +++ G + +GT+L+ MY+K G+L A+ +F+
Sbjct: 72 EVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFE 131
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
+ +++ WN+M+ G A HG +++AL LF+++ P DITF+GVL+AC HAG +
Sbjct: 132 RISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSE 191
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
G + F SMK YGIEPK+EHYGCMV+LLGR G + EA EL+K M D V+WG LL AC
Sbjct: 192 GWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGAC 251
Query: 396 KNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAA 455
+ HGNI + E++ + +++ N G YV+LSN+YA A + + G+A
Sbjct: 252 RLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGN-------------WEGVARVR 298
Query: 456 DILQNPDFESPP 467
+++ FE P
Sbjct: 299 TLMKESGFEKEP 310
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 33/277 (11%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A LF+ ++ + WN +I A P++ + L+ M PN+ T VL
Sbjct: 20 GMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVL 79
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC +L + +H+++ +G+ +++ V L+ YS L +AR VF+ I N+ +
Sbjct: 80 SACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVV 139
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +M+ GYA + +AL LF +M M G++P +T VL+AC+ +G + G K F
Sbjct: 140 AWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWK--FFY 197
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
M+ E G E + + M++ L G+ EEA
Sbjct: 198 SMKD-EYGI---------------------------EPKVEHYGCMVNLLGRAGYLEEAY 229
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
+L + +E +Q + + + +L AC G I +G QI
Sbjct: 230 ELVKNMEIDQ---DPVLWGTLLGACRLHGNIALGEQI 263
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 35/175 (20%)
Query: 277 MPERNIAT-------------------------------WNAMISGLASHGHAEEALDLF 305
MPE+++ + WN MI G A HG E L LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
R++ ++ PN++T + VLSAC G ++ GR + ++ GI + ++D+ +
Sbjct: 61 RQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIEN-NGIGINVRVGTSLIDMYSK 119
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE--IIALEPNN 418
CG + +A + +R+ K DVV W +++ HG + A R+ KE +I +P +
Sbjct: 120 CGSLEDARLVFERISNK-DVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTD 173
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 227/415 (54%), Gaps = 8/415 (1%)
Query: 32 KQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+HA+ + + S H S L + + G L A R+F+ + P+ W LI A
Sbjct: 91 EQLHARSLKLPSHTNPHVLTSLLSLY---AKCGLLHRAQRVFDEMPHPSTVPWTALITAY 147
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ + +A+ + N G P+ T VL AC+ + L + + + G+ +
Sbjct: 148 MDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSV 207
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V V Y ++ AR+VFD++R++ W M+ GYA + EAL LF M E
Sbjct: 208 FVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAE 267
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G +P+ +A LSAC + G L+LG + V F +LGTAL+ MY K G+ +A
Sbjct: 268 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEA 327
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F M +++I WNAMI GL GH + A L ++EK + ND TF+G+L +C H
Sbjct: 328 WVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHT 387
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G I GR+ F +M ++Y I P+IEHYGCMVDLL R G + EA +L+ M + V+ GA
Sbjct: 388 GLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 447
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE----AESMKMQLEI 441
LL CK H N E+AE V+K++I LEP N G YV+LSN+Y+ ++ K++L++
Sbjct: 448 LLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDM 502
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 152/300 (50%), Gaps = 3/300 (1%)
Query: 113 PNQHTFTFVLKACSNV-RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
P+ T LK+ S + L +Q+H K + HV+ L+ Y+ L+ A++
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFDE+ + + WT +I+ Y + EA+ + G P+S T VL+ACA+
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L GE V + G + TA V +Y K G +AKA+ +FD M ++ W AM+ G
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
AS+GH EALDLF ++ E + P+ G LSAC G +D+GRQ + ++
Sbjct: 248 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 307
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ ++D+ +CG +EA + ++M K D+++W A++ G+ ++A +V ++
Sbjct: 308 PVLGTA-LIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMILGLGMTGHEKIAFALVGQM 365
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 232/402 (57%), Gaps = 3/402 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q +A ++ D F + L++ A + G + + RLF + W LI
Sbjct: 124 QFYAHIVKFGLDFDAFVQNSLVS--AFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLR 181
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG-LDLDLH 151
+ +A+ ++ MR +G ++ T VL A + +R + + +H +SG + D++
Sbjct: 182 NGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVY 241
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + LV YS ++A +VF+E+ R L W +I+GY Q R EAL +F +M++EG
Sbjct: 242 VGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEG 301
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EPN T+ S L+ACAQ G L+ G +H +V + + LGTALV MY+K G + +A
Sbjct: 302 IEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEAL 361
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +P +++ W AMI+GLA G A +L+LF ++ + ++ PN +TF+GVLSAC H G
Sbjct: 362 LVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGG 421
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G ++F M Y +EP ++HYGCMVDLLGR G++ EA + I+ M +P +WGAL
Sbjct: 422 LVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGAL 481
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ C H E+ E + +I L+P++ G Y++L+N+Y+ +
Sbjct: 482 FSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQ 523
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 210/407 (51%), Gaps = 12/407 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + LKQ + +I S F S +L S++ DL Y LF+ + +P F+W
Sbjct: 17 KCGTFDHLKQTTSILITSGLAHHTFFLSDILR----SATKDLGYTLLLFDRLATPYIFLW 72
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NT+IR ++S P + Y +R G P++HTF +LKA S +R+ N Q + H+ K
Sbjct: 73 NTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNEN-PFQFYAHIVK 131
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GLD D V N LV ++ ++ +R++F E + + WT +I+G ++ RA EAL
Sbjct: 132 FGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALEC 191
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI-LGTALVHMYT 262
F +M G E + VT+ SVL A A + G VH F G + + +G+ALV MY+
Sbjct: 192 FVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYS 251
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G A +F+ MP RN+ +W A+I+G +EAL +F+++ E I PN T
Sbjct: 252 KCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTS 311
Query: 323 VLSACCHAGFIDVGRQIFGSMKRV-YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
L+AC G +D GR + + R G+ K+ +VD+ +CG V EA + +++
Sbjct: 312 ALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG--TALVDMYSKCGCVDEALLVFEKLPA 369
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
K DV W A++ G+ + + ++I ++PN VLS
Sbjct: 370 K-DVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLS 415
>gi|297743485|emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 240/468 (51%), Gaps = 83/468 (17%)
Query: 11 PPLP-IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P LP PPLSL+ CKSM QLKQIH+Q I + I + ++++AFC GD+ YA
Sbjct: 15 PSLPQTPPLSLIK-TCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYAR 73
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+F+++ PNHF+WN +I+ + P+ A+ +Y M G P+++T+ F+LK +
Sbjct: 74 MVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDT 133
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
++ C +++H H+ K G ++ V N L+ YS+S +++ AR VFD + W MIS
Sbjct: 134 AVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMIS 193
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY +S + +E++ LFD+M P+S+TL SVLSAC++ L +G++VH
Sbjct: 194 GYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH---------- 243
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ FD MPER+ +W AMI G +E L LFR+++
Sbjct: 244 ---------------------RNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQ 282
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY--GCMVDLLGRCG 367
I P++ T V +L+AC H G +++G I + + E KI+ + ++D+ CG
Sbjct: 283 AANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN---EIKIDSFVGNALIDMYFNCG 339
Query: 368 KVLEA---------------------------------------------EELIKRMVWK 382
V +A +E+IK M K
Sbjct: 340 NVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVIKNMPVK 399
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
P+ ++WG+LL AC+ H + E+AE ++I+ LEP N VYV+L N+YA
Sbjct: 400 PNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYA 447
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 226/398 (56%), Gaps = 2/398 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H+ I + + A+ L+ A G L A R F N W+ ++ A
Sbjct: 239 RQVHSLAIKNGLLAIVSVANALVTMYA--KCGSLDDAVRTFEFSGDKNSITWSAMVTGYA 296
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ DKA+ L+ M +G P++ T V+ ACS++ ++ KQ+H+ K G L L+
Sbjct: 297 QGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLY 356
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V++ +V Y+ L +AR+ F+ ++ + +WT++I+GY Q+ L L+ +M ME
Sbjct: 357 VLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMER 416
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN +T+ASVL AC+ L+ G+++H + GF++ +G+AL MYTK G+L
Sbjct: 417 VIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGY 476
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F MP R++ +WNAMISGL+ +GH +AL+LF K+ E I P+ +TFV +LSAC H G
Sbjct: 477 LIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMG 536
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G + F M + I P +EHY CMVD+L R GK+ EA+E I+ + +W L
Sbjct: 537 LVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRIL 596
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
L ACKNH N E+ ++++ L YV+LS++Y
Sbjct: 597 LGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIY 634
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 208/390 (53%), Gaps = 10/390 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
KQ H+ + + D + S LL +C +G + A +LF+ + N W T+I
Sbjct: 138 KQAHSVAVKTGCSGDVYVGSSLLNMYC---KTGFVFDARKLFDRMPERNTVSWATMISGY 194
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
ASS DKA+ ++ MRR N+ T VL A ++ + +Q+H+ K+GL +
Sbjct: 195 ASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIV 254
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V N LV Y+ L++A + F+ ++ W+ M++GYAQ +++AL LF++M
Sbjct: 255 SVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSS 314
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G P+ TL V++AC+ + G+++H F GF + + +A+V MY K G+LA A
Sbjct: 315 GVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADA 374
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ F+ + + ++ W ++I+G +G E L+L+ K++ E+++PN++T VL AC
Sbjct: 375 RKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSL 434
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+D G+Q+ + + YG + ++ + + +CG + + + RM + DV+ W A
Sbjct: 435 AALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR-DVISWNA 492
Query: 391 LLAACKN--HGN--IEVAERVVKEIIALEP 416
+++ HGN +E+ E+++ E I +P
Sbjct: 493 MISGLSQNGHGNKALELFEKMLLEGIKPDP 522
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 203/405 (50%), Gaps = 19/405 (4%)
Query: 12 PLPIPP--LSLLADKCKSMH-----QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
P PP LL D + H + + +HA+++ + I + + L A +
Sbjct: 4 PKIFPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYA--KTNH 61
Query: 65 LSYATRLFNSIQS--PNHFMWNTLIRAQASSLNPDK---AIFLYMNMRRTG-FAPNQHTF 118
LS+A LF+SI + WN+LI A + + + AI L+ M R PN HT
Sbjct: 62 LSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTL 121
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
V A SN+ + KQ H+ K+G D++V + L+ Y + + +AR++FD +
Sbjct: 122 AGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPE 181
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
R W TMISGYA S A++A+ +F+ M E N L SVLSA + G +V
Sbjct: 182 RNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQV 241
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H G + ALV MY K G+L A F+ ++N TW+AM++G A G +
Sbjct: 242 HSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDS 301
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYG 357
++AL LF K+ ++P++ T VGV++AC + G+Q+ + K +G++ +
Sbjct: 302 DKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYV--LS 359
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+VD+ +CG + +A + + V +PDVV+W +++ +G+ E
Sbjct: 360 AVVDMYAKCGSLADARKGFE-CVQQPDVVLWTSIITGYVQNGDYE 403
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 153/307 (49%), Gaps = 8/307 (2%)
Query: 111 FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNAR 170
F P L C++ +++ + +H + K+G ++V N + Y+ ++ L++A
Sbjct: 7 FPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHAL 66
Query: 171 QVFDEIRNRTLN--VWTTMISGYAQSFRANE---ALMLFDQML-MEGFEPNSVTLASVLS 224
+FD I + + W ++I+ ++Q+ ++ A+ LF +M+ PN+ TLA V S
Sbjct: 67 TLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFS 126
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
A + + G++ H G +G++L++MY K G + A+ LFD MPERN +
Sbjct: 127 AASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVS 186
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
W MISG AS A++A+++F + +E+ + N+ VLSA F+ GRQ+ S+
Sbjct: 187 WATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVH-SLA 245
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
G+ + +V + +CG + +A + + + W A++ G+ + A
Sbjct: 246 IKNGLLAIVSVANALVTMYAKCGSLDDAVRTFE-FSGDKNSITWSAMVTGYAQGGDSDKA 304
Query: 405 ERVVKEI 411
++ ++
Sbjct: 305 LKLFNKM 311
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 211/371 (56%), Gaps = 10/371 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++++ R+F I N W +LI ++ AI + M+ G PN+ +L
Sbjct: 155 GEVNWGLRVFEDIPKLNVVAWGSLISGFVNNNRFSDAIEAFREMQSIGVKPNETIMVDLL 214
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC C +S + ++ + L+ Y+ D+ AR +FD + R L
Sbjct: 215 VACGRCFDPYC---------QSKFEFNVILATSLIDMYAKCGDMRTARYLFDGMPERNLV 265
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W ++I+GY+Q+ A EA+ +F ML G P+ VT SV+ A GC +LG+ +H +V
Sbjct: 266 SWNSIITGYSQNGDAEEAMCMFSDMLDLGIAPDKVTFFSVIRASMIQGCSQLGQTIHAYV 325
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
GF A + ALV+MY K G AK +F+ + +++ W +I GLASHGH +AL
Sbjct: 326 SKTGFVKDAAIVCALVNMYAKTGNAESAKKMFEDLEKKDTIAWTVVIIGLASHGHGNKAL 385
Query: 303 DLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+F+++++E P+ IT++GVL AC H G ++ G++ F M+ +YG+EP +EHYGCMVD
Sbjct: 386 SIFQRMQEEGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLYGLEPTVEHYGCMVD 445
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
+L R G+ EAE L+K M +P +WGALL C+ H N+++A+R+ + E G+
Sbjct: 446 ILSRAGRFEEAERLVKTMPVQPTANIWGALLNGCEIHENLDLADRIRSMVSESEELGSGI 505
Query: 422 YVVLSNMYAEA 432
YV+LSN+YA+A
Sbjct: 506 YVLLSNIYAKA 516
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 215/386 (55%), Gaps = 13/386 (3%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNS 74
P LS L + C+SM +L Q+H MI SS I++ SRL+ FC + +LSYA +F S
Sbjct: 7 PILSQL-ENCRSMVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 65
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I P+ ++WN++IR ++S NPDKA+ Y M R G++P+ TF +VLKACS +R +
Sbjct: 66 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 125
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+H V K+G +++++V CL+ Y ++N +VF++I + W ++ISG+ +
Sbjct: 126 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLNVVAWGSLISGFVNN 185
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
R ++A+ F +M G +PN + +L AC + C + + + + FE IL
Sbjct: 186 NRFSDAIEAFREMQSIGVKPNETIMVDLLVACGR--CFD------PYCQSK-FEFNVILA 236
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
T+L+ MY K G + A+ LFD MPERN+ +WN++I+G + +G AEEA+ +F + I
Sbjct: 237 TSLIDMYAKCGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDMLDLGIA 296
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+ +TF V+ A G +G+ I + + G +V++ + G A++
Sbjct: 297 PDKVTFFSVIRASMIQGCSQLGQTIHAYVSKT-GFVKDAAIVCALVNMYAKTGNAESAKK 355
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGN 400
+ + + K D + W ++ +HG+
Sbjct: 356 MFEDLE-KKDTIAWTVVIIGLASHGH 380
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 48/260 (18%)
Query: 30 QLKQ-IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
QL Q IHA + + ++D L+ A +G+ A ++F ++ + W +I
Sbjct: 316 QLGQTIHAYVSKTGFVKDAAIVCALVNMYA--KTGNAESAKKMFEDLEKKDTIAWTVVII 373
Query: 89 AQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
AS + +KA+ ++ M+ G A P+ T+ VL ACS++ GL
Sbjct: 374 GLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLYACSHI----------------GL- 416
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRN-----RTLNVWTTMISGYAQSFRANEALM 202
+ ++ F E+R+ T+ + M+ +++ R EA
Sbjct: 417 ------------------VEEGQRYFAEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAER 458
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
L M + +P + ++L+ C L+L +++ V E+G+ + L ++Y
Sbjct: 459 LVKTMPV---QPTANIWGALLNGCEIHENLDLADRIRSMVS-ESEELGSGIYVLLSNIYA 514
Query: 263 KNGALAKAKALFDSMPERNI 282
K G A K + +SM + +
Sbjct: 515 KAGRWADVKLIRESMKSKRV 534
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 237/401 (59%), Gaps = 3/401 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
LK++H + + + A+ +A + + G LSYA R+F+ I+S WN LI
Sbjct: 164 LKELHCYSLKQEFVYNELVANAFVA--SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 221
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A S +P ++ ++ M+ +G P+ T +L ACS ++SL K++H + ++ L+ DL
Sbjct: 222 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 281
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V ++ Y +L + +FD + +++L W T+I+GY Q+ + AL +F QM++
Sbjct: 282 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 341
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G + +++ V AC+ L LG + H + E A + +L+ MY KNG++ ++
Sbjct: 342 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 401
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F+ + E++ A+WNAMI G HG A+EA+ LF ++++ P+D+TF+GVL+AC H+
Sbjct: 402 SKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 461
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI-KRMVWKPDVVMWG 389
G I G + MK +G++P ++HY C++D+LGR G++ +A ++ + M + DV +W
Sbjct: 462 GLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 521
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+LL++C+ H N+E+ E+V ++ LEP YV+LSN+YA
Sbjct: 522 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 562
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 170/358 (47%), Gaps = 12/358 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHT 117
S G ++ A +F + N WNT++ ++ + + M G ++ T
Sbjct: 88 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 147
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ C + L K++H + K + V N V Y+ L+ A++VF IR
Sbjct: 148 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 207
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
++T+N W +I G+AQS +L QM + G P+S T+ S+LSAC++ L LG++
Sbjct: 208 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 267
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH F+ E + +++ +Y G L +ALFD+M ++++ +WN +I+G +G
Sbjct: 268 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 327
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH-- 355
+ AL +FR++ I I+ + V AC + +GR+ Y ++ +E
Sbjct: 328 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDA 382
Query: 356 -YGC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
C ++D+ + G + ++ ++ + K W A++ HG + A ++ +E+
Sbjct: 383 FIACSLIDMYAKNGSITQSSKVFNGLKEKS-TASWNAMIMGYGIHGLAKEAIKLFEEM 439
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 156/340 (45%), Gaps = 8/340 (2%)
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRT----GFAPNQHTFTFVLKACSNVRSLNCC 134
N WN++IR + + +++ L M F P+ T VL C+ R +
Sbjct: 2 NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
K +H K LD +L + N L+ YS + NA+ +F N+ + W TM+ G++
Sbjct: 62 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121
Query: 195 FRANEALMLFDQMLM--EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ + QML E + + VT+ + + C L +++H + + F +
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 181
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+ A V Y K G+L+ A+ +F + + + +WNA+I G A +LD +++
Sbjct: 182 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 241
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
++P+ T +LSAC + +G+++ G + R + +E + Y ++ L CG++
Sbjct: 242 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELCTV 300
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ L M K +V W ++ +G + A V ++++
Sbjct: 301 QALFDAMEDKS-LVSWNTVITGYLQNGFPDRALGVFRQMV 339
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLME----GFEPNSVTLASVLSACAQSGCLEL 234
R W +MI ++ + + E+ +L +M+ E F P+ TL +VL CA+ + L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 235 GEKVHVF-VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G+ VH + VK+R + +L AL+ MY+K G + A+ +F +N+ +WN M+ G +
Sbjct: 61 GKGVHGWAVKLR-LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 119
Query: 294 SHGHAEEALDLFRKL--EKEQIVPNDITFVGVLSACCHAGFI 333
+ G D+ R++ E + +++T + + C H F+
Sbjct: 120 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 161
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 23/161 (14%)
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQ----IVPNDITFVGVLSACCHAGFIDV 335
RN +WN+MI + +G +EE+ L ++ +E +P+ T V VL C I +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
G+ + G ++ ++ ++ ++D+ +CG + A ++I +M +VV W ++
Sbjct: 61 GKGVHGWAVKLR-LDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG- 117
Query: 396 KNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ E + HG + VL M A E +K
Sbjct: 118 ----------------FSAEGDTHGTFDVLRQMLAGGEDVK 142
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 233/427 (54%), Gaps = 4/427 (0%)
Query: 8 LRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
+R + + L+ A K + L+ IH+ I D ++ +A A + G+
Sbjct: 151 IRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIA--AYAKCGEFGL 208
Query: 68 ATRLFNSIQS--PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A +F+ I WN++I A KA+ + M GF + T +L +C
Sbjct: 209 AETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSC 268
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
L K IH H + G D D+ V+N L+ YS D+ +AR +FD + +T WT
Sbjct: 269 VQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWT 328
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
MI+G A+ +EA+ LF M G +P+ VT+ S++S C Q+G LELG+ + +
Sbjct: 329 AMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATAN 388
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G + ++ AL+ +Y K G++ A+ LF +MPE+++ +W +I+G A +G +EAL LF
Sbjct: 389 GLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLF 448
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
++ + + PN ITF+ VL AC HAGF++ G + F M +VY I P ++HY CM DLLGR
Sbjct: 449 FQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGR 508
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G++ EA E I+ M +KPDV +W LL+ACK H N+ + E V + LEP YV +
Sbjct: 509 KGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQM 568
Query: 426 SNMYAEA 432
+N+YA A
Sbjct: 569 ANIYASA 575
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 203/430 (47%), Gaps = 14/430 (3%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLK--QIHAQMIISSRIQ-DHFAASRLLAFCAL 59
+K + L L P + A C + LK QI ++ SR Q D F + ++
Sbjct: 45 MKQNGLEPNNLTFPSV---AKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVK 101
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S L +A LF+ + + WN++I A D+ + L+ M G + T
Sbjct: 102 CS--QLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVI 159
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN- 178
+ + +++ L + IH+ K G+D D+ V N + Y+ + A VFD I
Sbjct: 160 GLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKG 219
Query: 179 -RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+T W +MI+GYA + ++A+ F +ML GF + T+ S+LS+C Q L G+
Sbjct: 220 LKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKL 279
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H G + + L+ MY+K G + A+ LFD+M + +W AMI+G A G
Sbjct: 280 IHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGD 339
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EA+ LF +E P+ +T + ++S C G +++G+ I + G++ +
Sbjct: 340 LDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWI-DTYATANGLKDNLMVCN 398
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALE 415
++D+ +CG + A EL M K +V W L+A C +G + A + +++ L+
Sbjct: 399 ALIDVYAKCGSMDNARELFYTMPEK-SLVSWTTLIAGCALNGEFKEALGLFFQMVELGLK 457
Query: 416 PNNHGVYVVL 425
PN+ VL
Sbjct: 458 PNHITFLAVL 467
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 156/340 (45%), Gaps = 11/340 (3%)
Query: 74 SIQSPNHF-------MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
+ QS N F WN+ I + KA+ L+ M++ G PN TF V KACS
Sbjct: 6 ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
+ +L + +HTHV KS DL V +V Y S L A +F + R + W +
Sbjct: 66 KLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNS 125
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MI G+AQ + + LF +M +EG +SVT+ + + L++ E +H F G
Sbjct: 126 MIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185
Query: 247 FEMGAILGTALVHMYTKNGALAKAKALFDSMPE--RNIATWNAMISGLASHGHAEEALDL 304
+ + + Y K G A+ +FD + + + +WN+MI+G A +A+
Sbjct: 186 IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGF 245
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F+K+ + T + +LS+C + G+ I +V G + I+ ++ +
Sbjct: 246 FKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQV-GCDSDIQVINTLISMYS 304
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+CG + A L M+ K V W A++A G+++ A
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVS-WTAMIAGXAEKGDLDEA 343
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 239/431 (55%), Gaps = 14/431 (3%)
Query: 25 CKSMHQLKQIHAQMIISSR-IQDHFA-ASRLLAFC---ALSSSGDLSYATRLFNSIQSPN 79
C S+ L Q+HA + + +Q H A +RLL C + L+YA ++F+ I P
Sbjct: 38 CTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPG 97
Query: 80 HFMW-NTLIRAQASSLNPDKAIF----LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+W NTL+R A +++ M G AP+ +TF +LKAC++ R+
Sbjct: 98 DVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEG 157
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+Q H K+G +V L+ Y+ D+ AR +FD + + + MI+ +S
Sbjct: 158 RQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRS 217
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EAL+LF +M +G +P SVTL SVLSACA G LELG +H +++ + +
Sbjct: 218 SLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVN 277
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
TAL+ MY K G+L A +F M R+ W+ M+ A+HG+ EA+ +F +++K+ +
Sbjct: 278 TALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK 337
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+D+TF+GVL AC H+G + G Q F SM R YGI I+HYGC+ DLL R G++ A +
Sbjct: 338 PDDVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYK 396
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA-- 432
I + KP ++W LL+AC HG++++ +RV + I+ L+ ++ G YV+ SN+ A
Sbjct: 397 FIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGR 456
Query: 433 -ESMKMQLEIL 442
E M M +++
Sbjct: 457 WEEMNMVRKLM 467
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 17/290 (5%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLH---VVNCLVRCYSVSSD----LNNARQVFD 174
L C+++R+L Q+H K+G L H V L C ++ L ARQVFD
Sbjct: 35 LPHCTSLRAL---AQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFD 91
Query: 175 EIRNRTLNVWTTMI-----SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
I + VW + G A EA +F +M+ EG P++ T S+L ACA +
Sbjct: 92 RIPHPGDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASA 151
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
E G + H G + L++MY + G + A+ +FD M + ++NAMI
Sbjct: 152 RAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMI 211
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
+ EAL LFR+++ + + P +T + VLSAC G +++GR I ++++ +
Sbjct: 212 TASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMR-L 270
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ ++ ++D+ +CG + +A + + M + D W ++ A NHG
Sbjct: 271 DSLVKVNTALIDMYAKCGSLEDAIGVFQDMESR-DKQAWSVMMVAYANHG 319
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 241/418 (57%), Gaps = 7/418 (1%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISS-RIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
LS+ + + + K +HA +I S RI + L + L+ + ++F+ ++
Sbjct: 363 LSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNC---VESVQKIFDRMK 419
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+ WNT+I A A + +A L+ MR + PN +T +L AC +V L+ +
Sbjct: 420 GVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRS 479
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
IH +V K ++++ + L Y D AR +F+ +R L W MI+ Y ++ +
Sbjct: 480 IHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQ 539
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA--ILG 254
A++AL+LF +M+ E EPNSVT+ +VLS+ L G+ +H +V RGF +G L
Sbjct: 540 AHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLA 598
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
A + MY + G+L A+ +F ++P+RNI +WNAMI+G +G +A+ F ++ ++
Sbjct: 599 NAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFR 658
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN +TFV VLSAC H+GFI++G Q+F SM + + + P++ HY C+VDLL R G + EA E
Sbjct: 659 PNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEARE 718
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
I M +PD +W ALL++C+ + + + A+ + +++ LEP N G YV+LSN+YA A
Sbjct: 719 FIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATA 776
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 135/266 (50%), Gaps = 4/266 (1%)
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I+ P H WN++I+ QA+ N + Y M G PN T VLKAC+ ++
Sbjct: 15 IKDPKH--WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERG 72
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
K IH + + L D+ V +V Y + +AR VFD + +R + +W M+ GY
Sbjct: 73 KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGW 132
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG-FEMGAIL 253
EA++L +M E PNS T+ ++L AC + L LG VH + G F+ +
Sbjct: 133 GCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHV 192
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
TAL+ Y + + LFD M RNI +WNAMISG G +AL+LF ++ +++
Sbjct: 193 ATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEV 251
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQI 339
+ +T + + AC G + +G+QI
Sbjct: 252 KFDCVTMLVAVQACAELGSLKLGKQI 277
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 173/364 (47%), Gaps = 40/364 (10%)
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
+F+++ + +WN ++ ++A+ L M R PN T +L AC
Sbjct: 110 VFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASE 169
Query: 131 LNCCKQIHTHVSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
L + +H + ++G+ D + HV L+ Y + D+ +FD + R + W MIS
Sbjct: 170 LRLGRGVHGYCLRNGMFDSNPHVATALIGFY-LRFDMRVLPLLFDLMVVRNIVSWNAMIS 228
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY +AL LF QML++ + + VT+ + ACA+ G L+LG+++H F
Sbjct: 229 GYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVE 288
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ AL++MY+ NG+L + LF+S+P R+ WN+MIS A+ G EEA+DLF +++
Sbjct: 289 DLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQ 348
Query: 310 KEQIVPNDITFVGVLSAC------------CHAGFIDVGRQIFGSM-------------- 343
E + ++ T V +LS C HA I G +I S+
Sbjct: 349 SEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCV 408
Query: 344 -------KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV---WKPDVVMWGALLA 393
R+ G++ I + M+ L R +A EL +RM KP+ ++LA
Sbjct: 409 ESVQKIFDRMKGVD--IISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILA 466
Query: 394 ACKN 397
AC++
Sbjct: 467 ACED 470
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%)
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W ++I A L + QM G PN+ TL VL ACA +E G+ +H ++
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
+GTA+V Y K G + A+ +FD+M +R++ WNAM+ G G EEA+
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
L R++ +E + PN T V +L AC A + +GR + G R
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLR 182
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN++I A+ + + L + ++E ++PN+ T VL AC ++ G+ I S++
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ + +VD +CG V +A + M DVV+W A++ G E A
Sbjct: 81 GT-DLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS-DRDVVLWNAMVYGYVGWGCYEEA 138
Query: 405 ERVVKEI--IALEPNNHGVYVVL 425
+V+E+ L PN+ + +L
Sbjct: 139 MLLVREMGRENLRPNSRTMVALL 161
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 227/408 (55%), Gaps = 6/408 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLF--NSIQSPNHFMWNTLIR 88
+Q+H +I + F + L++ +C G + A ++F N S +N LI
Sbjct: 70 QQLHCHVIRGGCEAEPFVLTALISMYC---KCGLVEDARKVFEENPHSSQLGVCYNALIS 126
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
++ A F++ M+ TG + + T ++ C+ L + +H K G
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS 186
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++ V+N + Y + + R++FDE+ + L W +ISGY+Q+ A + L LF+QM
Sbjct: 187 EVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK 246
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G P+ TL SVLS+CA G ++G++V V+ GF L AL+ MY + G LA
Sbjct: 247 SSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLA 306
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
KA+A+FD MP +++ +W AMI HG E L LF + K I P+ FV VLSAC
Sbjct: 307 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACS 366
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H+G D G ++F +MKR Y +EP EHY C+VDLLGR G++ EA E I M +PD +W
Sbjct: 367 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVW 426
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
GALL ACK H N+++AE ++I EP N G YV++SN+Y+++++ +
Sbjct: 427 GALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQE 474
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 181/349 (51%), Gaps = 8/349 (2%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN +R A ++I LY +M R+G +P+ +F F+LK+C+++ +Q+H HV
Sbjct: 18 WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVI 77
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE-IRNRTLNV-WTTMISGYAQSFRANEA 200
+ G + + V+ L+ Y + +AR+VF+E + L V + +ISGY + + ++A
Sbjct: 78 RGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDA 137
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAILGTALVH 259
+F +M G +SVT+ ++ C L LG +H VK + A+L + +
Sbjct: 138 AFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVL-NSFIT 196
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G++ + LFD MP + + TWNA+ISG + +G A + L+LF +++ + P+ T
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
V VLS+C H G +G+++ G + G P + ++ + RCG + +A + M
Sbjct: 257 LVSVLSSCAHLGAKKIGQEV-GELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
K +V W A++ HG E + ++I + P+ +VLS
Sbjct: 316 PVK-SLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLS 363
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 214/382 (56%), Gaps = 39/382 (10%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S++G + A ++F+ + + W T++ A L+ D A L M A +
Sbjct: 915 SATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS----- 969
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
NCL+ Y +L A +F+++ +
Sbjct: 970 ----------------------------------NCLINGYMGLGNLEQAESLFNQMPVK 995
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ WTTMI GY+Q+ R EA+ +F +M+ EG P+ VT+++V+SACA G LE+G++VH
Sbjct: 996 DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
++ GF + +G+ALV MY+K G+L +A +F ++P++N+ WN++I GLA+HG A+
Sbjct: 1056 MYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ 1115
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL +F K+E E + PN +TFV V +AC HAG +D GR+I+ SM Y I +EHYG M
Sbjct: 1116 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGM 1175
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
V L + G + EA ELI M ++P+ V+WGALL C+ H N+ +AE +++ LEP N
Sbjct: 1176 VHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNS 1235
Query: 420 GVYVVLSNMYAEAESMKMQLEI 441
G Y +L +MYAE + EI
Sbjct: 1236 GYYFLLVSMYAEQNRWRDVAEI 1257
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 194/408 (47%), Gaps = 49/408 (12%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
L P L + +C + L+ A MI +S QD ++ + C DL+ +T
Sbjct: 771 LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVST--M 828
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+Q PN F++N L + + +P +++ LY+ M R +P+ +T++ ++KA S
Sbjct: 829 TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFG 888
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+ + H+ K G + + L+ YS + + AR+VFDE+ R WTTM+S Y
Sbjct: 889 --ESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR 946
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ + A L +QM E N T S CL
Sbjct: 947 RVLDMDSANSLANQM----SEKNEAT----------SNCL-------------------- 972
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
++ Y G L +A++LF+ MP ++I +W MI G + + EA+ +F K+ +E
Sbjct: 973 -----INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
I+P+++T V+SAC H G +++G+++ +++ + ++ I +VD+ +CG LE
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIG--SALVDMYSKCGS-LE 1084
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPN 417
L+ + K ++ W +++ HG + A ++ E+ +++PN
Sbjct: 1085 RALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 1132
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 35/195 (17%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K++H + + + D + S L+ S G L A +F ++ N F WN++I A
Sbjct: 1052 KEVHMYTLQNGFVLDVYIGSALVDM--YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 1109
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A+ ++ M PN TF V AC++ ++ ++I+
Sbjct: 1110 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY------------- 1156
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
++ YS+ S++ + + M+ ++++ EAL L M
Sbjct: 1157 --RSMIDDYSIVSNVEH---------------YGGMVHLFSKAGLIYEALELIGNM---E 1196
Query: 212 FEPNSVTLASVLSAC 226
FEPN+V ++L C
Sbjct: 1197 FEPNAVIWGALLDGC 1211
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 211/371 (56%), Gaps = 10/371 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+++Y R+F I N W +LI ++ AI + M+ G N+ +L
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC R + Q SK G ++ L L+ Y+ DL AR +FD + RTL
Sbjct: 216 VACG--RCFDPYFQ-----SKVGFNVIL--ATSLIDMYAKCGDLRTARYLFDGMPERTLV 266
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W ++I+GY+Q+ A EAL +F ML G P+ VT SV+ A GC +LG+ +H +V
Sbjct: 267 SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 326
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
GF A + ALV+MY K G AK F+ + +++ W +I GLASHGH EAL
Sbjct: 327 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEAL 386
Query: 303 DLFRKL-EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+F+++ EK P+ IT++GVL AC H G ++ G++ F M+ ++G+EP +EHYGCMVD
Sbjct: 387 SIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVD 446
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
+L R G+ EAE L+K M KP+V +WGALL C H N+E+ +R+ + E G+
Sbjct: 447 ILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGI 506
Query: 422 YVVLSNMYAEA 432
YV+LSN+YA+A
Sbjct: 507 YVLLSNIYAKA 517
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 212/386 (54%), Gaps = 13/386 (3%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNS 74
P LS L + C+S+ +L Q+H MI SS I++ SRL+ FC + +LSYA +F S
Sbjct: 8 PILSQL-ENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I P+ ++WN++IR ++S NPDKA+ Y M R G++P+ TF +VLKACS +R +
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+H V K+G +++++V CL+ Y ++N +VF++I + W ++ISG+ +
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
R ++A+ F +M G + N + +L AC + C + F GF + IL
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGR--CFD-----PYFQSKVGFNV--ILA 237
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
T+L+ MY K G L A+ LFD MPER + +WN++I+G + +G AEEAL +F + I
Sbjct: 238 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 297
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
P+ +TF+ V+ A G +G+ I + + G +V++ + G A++
Sbjct: 298 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKTGDAESAKK 356
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGN 400
+ + K D + W ++ +HG+
Sbjct: 357 AFEDLE-KKDTIAWTVVIIGLASHGH 381
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 119/290 (41%), Gaps = 49/290 (16%)
Query: 1 MSLKCSSLRQPPLPIPPLSLL-ADKCKSMHQLKQ-IHAQMIISSRIQDHFAASRLLAFCA 58
M L L P + LS++ A + QL Q IHA + + ++D L+ A
Sbjct: 287 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 346
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHT 117
+GD A + F ++ + W +I AS + ++A+ ++ M+ G A P+ T
Sbjct: 347 --KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 404
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ VL ACS++ GL + ++ F E+R
Sbjct: 405 YLGVLYACSHI----------------GL-------------------VEEGQRYFAEMR 429
Query: 178 NR-----TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
+ T+ + M+ +++ R EA L M + +PN ++L+ C L
Sbjct: 430 DLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV---KPNVNIWGALLNGCDIHENL 486
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
EL +++ V E+G+ + L ++Y K G A K + +SM + +
Sbjct: 487 ELTDRIRSMVA-EPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRV 535
>gi|212275680|ref|NP_001130323.1| uncharacterized protein LOC100191417 [Zea mays]
gi|194688846|gb|ACF78507.1| unknown [Zea mays]
gi|413945339|gb|AFW77988.1| hypothetical protein ZEAMMB73_191992 [Zea mays]
Length = 401
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 204/349 (58%), Gaps = 1/349 (0%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N+L+ + A S P +A+ + +M G P+ T VL++C+ + H K
Sbjct: 13 NSLLASLARSGRPAQALCTFRDMLARGIPPDHFTLPPVLRSCTLTGAAGLASTSHALAVK 72
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
G +L V + LV CY+ S+L +AR++FD +R R +WT+M+S YAQ + A+
Sbjct: 73 LGAQENLFVASALVLCYAGLSNLPDARRLFDGMRERDAVLWTSMLSAYAQGGEPDAAMRF 132
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F M+ G E ++V + S+L AC Q G G VH R M LG ALV MY K
Sbjct: 133 FGSMVAAGMELDAVVMISLLLACGQLGWRRHGRSVHGCCIRRFLGMPLPLGNALVDMYVK 192
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G A A+ +F MP R++ +W+A+I G +G ++ AL LF ++ E I PN +TF+G
Sbjct: 193 CGDFAFAQRVFVGMPRRDVISWSALILGHGLNGRSDVALGLFDRMSAEGIRPNSVTFLGA 252
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC H+G +D G IF MK + GIEP+++HY CM D+LGR G V+EA +LI+ M +P
Sbjct: 253 LSACAHSGMVDKGYAIFKGMK-LSGIEPELKHYSCMADMLGRAGHVVEAMKLIEEMPCEP 311
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
D M G +LAAC+ HG +E AE V K ++ + P G Y+ L+N+Y++A
Sbjct: 312 DEAMLGGVLAACRVHGEMESAEWVSKRLMGMSPGKSGYYMSLANIYSDA 360
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 42/343 (12%)
Query: 35 HAQMIISSRIQDHFAASRL-LAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
HA + ++ F AS L L + LS +L A RLF+ ++ + +W +++ A A
Sbjct: 67 HALAVKLGAQENLFVASALVLCYAGLS---NLPDARRLFDGMRERDAVLWTSMLSAYAQG 123
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
PD A+ + +M G + +L AC + + +H + L + L +
Sbjct: 124 GEPDAAMRFFGSMVAAGMELDAVVMISLLLACGQLGWRRHGRSVHGCCIRRFLGMPLPLG 183
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N LV Y D A++VF + R + W+ +I G+ + R++ AL LFD+M EG
Sbjct: 184 NALVDMYVKCGDFAFAQRVFVGMPRRDVISWSALILGHGLNGRSDVALGLFDRMSAEGIR 243
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PNSVT LSACA SG ++ G + +K+ G E
Sbjct: 244 PNSVTFLGALSACAHSGMVDKGYAIFKGMKLSGIE------------------------- 278
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
PE + ++ M L GH EA+ L ++ E P++ GVL+AC G +
Sbjct: 279 ----PE--LKHYSCMADMLGRAGHVVEAMKLIEEMPCE---PDEAMLGGVLAACRVHGEM 329
Query: 334 DVGRQIFGSMKRVYGIEP-KIEHYGCMVDLLGRCGKVLEAEEL 375
+ + KR+ G+ P K +Y + ++ G+ +AE +
Sbjct: 330 ESAEWV---SKRLMGMSPGKSGYYMSLANIYSDAGRYSDAETI 369
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 6/242 (2%)
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
TL ++++ A+S R +AL F ML G P+ TL VL +C +G L H
Sbjct: 8 TLASLNSLLASLARSGRPAQALCTFRDMLARGIPPDHFTLPPVLRSCTLTGAAGLASTSH 67
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
G + + +ALV Y L A+ LFD M ER+ W +M+S A G +
Sbjct: 68 ALAVKLGAQENLFVASALVLCYAGLSNLPDARRLFDGMRERDAVLWTSMLSAYAQGGEPD 127
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGC 358
A+ F + + + + + +L AC G+ GR + G ++R G+ + +
Sbjct: 128 AAMRFFGSMVAAGMELDAVVMISLLLACGQLGWRRHGRSVHGCCIRRFLGMPLPLGN--A 185
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEP 416
+VD+ +CG A+ + M + DV+ W AL+ +G +VA + + A + P
Sbjct: 186 LVDMYVKCGDFAFAQRVFVGMPRR-DVISWSALILGHGLNGRSDVALGLFDRMSAEGIRP 244
Query: 417 NN 418
N+
Sbjct: 245 NS 246
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 232/402 (57%), Gaps = 3/402 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q +A ++ D F + L++ A + G + + RLF + W LI
Sbjct: 124 QFYAHIVKFGLDFDAFVQNSLVS--AFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLR 181
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG-LDLDLH 151
+ +A+ ++ MR +G ++ T VL A + +R + + +H +SG + D++
Sbjct: 182 NGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVY 241
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + LV YS ++A +VF+E+ R L W +I+GY Q R EAL +F +M++EG
Sbjct: 242 VGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEG 301
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EPN T+ S L+ACAQ G L+ G +H +V + + LGTALV MY+K G + +A
Sbjct: 302 IEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEAL 361
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +P +++ W AMI+GLA G A +L+LF ++ + ++ PN +TF+GVLSAC H G
Sbjct: 362 LVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGG 421
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D G ++F M Y +EP ++HYGCMVDLLGR G++ EA + I+ M +P +WGAL
Sbjct: 422 LVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGAL 481
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ C H E+ E + +I L+P++ G Y++L+N+Y+ +
Sbjct: 482 FSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQ 523
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 210/407 (51%), Gaps = 12/407 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + L Q + +I S F S LL S++ DL Y LF+ + +P F+W
Sbjct: 17 KCGTFDHLNQTTSILITSGLAHHTFFLSDLLR----SATKDLGYTLLLFDRLATPYIFLW 72
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NT++R+ ++S P + Y +R G P++HTF +LKA S +R+ N Q + H+ K
Sbjct: 73 NTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNEN-PFQFYAHIVK 131
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GLD D V N LV ++ ++ +R++F E + + WT +I+G ++ RA EAL
Sbjct: 132 FGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALEC 191
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI-LGTALVHMYT 262
F +M G E + VT+ SVL A A + G VH F G + + +G+ALV MY+
Sbjct: 192 FVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYS 251
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G A +F+ MP RN+ +W A+I+G +EAL +F+++ E I PN T
Sbjct: 252 KCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTS 311
Query: 323 VLSACCHAGFIDVGRQIFGSMKRV-YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
L+AC G +D GR + + R G+ K+ +VD+ +CG V EA + +++
Sbjct: 312 ALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG--TALVDMYSKCGCVDEALLVFEKLPA 369
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
K DV W A++ G+ + + ++I ++PN VLS
Sbjct: 370 K-DVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLS 415
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 205/370 (55%), Gaps = 5/370 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GD+ A LF+ ++ P+ +N LI + + ++ L+ + G P+ T ++
Sbjct: 270 GDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALI 329
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
S +H HV K+GLD + V L Y +D+++AR+ FD + +T+
Sbjct: 330 PVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTME 389
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W MISGYAQ+ A+ LF QM PN +T++S LSACAQ G L LG+ VH +
Sbjct: 390 SWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKII 449
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
E+ + TAL+ MY K G++A+A+ +FDSM +N+ +WN MISG HG EAL
Sbjct: 450 ANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEAL 509
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
L++ + + P TF+ VL AC H G + G +F SM YGI P IEH CMVDL
Sbjct: 510 KLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDL 569
Query: 363 LGRCGKVLEAEELIK---RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
LGR G++ EA ELI + P + WGALL AC H + ++A+ +++ LEP N
Sbjct: 570 LGRAGQLKEAFELISEFPKSAVGPGI--WGALLGACMVHKDGDLAKLASQKLFELEPENT 627
Query: 420 GVYVVLSNMY 429
G YV+LSN+Y
Sbjct: 628 GYYVLLSNLY 637
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 195/387 (50%), Gaps = 17/387 (4%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
L+ +HA + S D+F AS L + LS D A ++F+++ SP+ +WNTL+
Sbjct: 142 LRPLHALAVASGFAADNFVASALAKLYFTLSRGND---ARKVFDAVPSPDTVLWNTLL-- 196
Query: 90 QASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+ L+ +A+ ++ M G P+ T VL A + V + + +H K GL
Sbjct: 197 --AGLSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQ 254
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
HVV L+ Y+ D+ AR +FD + L + +ISGY+ + ++ LF +++
Sbjct: 255 HEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELV 314
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G P+S TL +++ + G L +H V G + A + TAL +Y + +
Sbjct: 315 GMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMD 374
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A+ FD+MPE+ + +WNAMISG A +G E A+ LF++++ + PN +T LSAC
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACA 434
Query: 329 HAGFIDVGR---QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
G + +G+ +I + K +E + ++D+ +CG + EA + M K +V
Sbjct: 435 QLGALSLGKWVHKIIANEK----LELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK-NV 489
Query: 386 VMWGALLAACKNHGNIEVAERVVKEII 412
V W +++ HG A ++ K+++
Sbjct: 490 VSWNVMISGYGLHGQGAEALKLYKDMM 516
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 196/439 (44%), Gaps = 69/439 (15%)
Query: 46 DHF-AASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
DH A+S LL + +L S ++ RL+ + P+ F+ N+L+R SL +A L+
Sbjct: 56 DHAPASSLLLRYASLRSPP--AHLLRLYRAFPRPDRFLRNSLLR----SLPTLRADLLF- 108
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLN------------CCKQIHTHVSKSGLDLDLHV 152
P+ +F+F A S S + + +H SG D V
Sbjct: 109 --------PSPDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFV 160
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG- 211
+ L + Y S N+AR+VFD + + +W T+++G + S EAL F +M G
Sbjct: 161 ASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS----EALEAFVRMAGAGS 216
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+S TLASVL A A+ +G VH F + G + T L+ +Y K G + A+
Sbjct: 217 VRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECAR 276
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV-------- 323
LFD M ++ T+NA+ISG + +G +++LF++L + P+ T V +
Sbjct: 277 HLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFG 336
Query: 324 ---LSACCHAGFIDVGRQI-----------------FGSMKRVYGIEPK--IEHYGCMVD 361
L+ C HA + G S +R + P+ +E + M+
Sbjct: 337 HEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMIS 396
Query: 362 LLGRCGKVLEAEELIKRMVW---KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
+ G A L ++M +P+ + + L+AC G + + + V K IIA E
Sbjct: 397 GYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHK-IIANEKLE 455
Query: 419 HGVYVV--LSNMYAEAESM 435
VYV+ L +MY + S+
Sbjct: 456 LNVYVMTALIDMYVKCGSI 474
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 227/415 (54%), Gaps = 8/415 (1%)
Query: 32 KQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+HA+ + + S H S L + + G L A R+F+ + P+ W LI A
Sbjct: 546 EQLHARSLKLPSHTNPHVLTSLLSLY---AKCGLLHRAQRVFDEMPHPSTVPWTALITAY 602
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ + +A+ + N G P+ T VL AC+ + L + + + G+ +
Sbjct: 603 MDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSV 662
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V V Y ++ AR+VFD++R++ W M+ GYA + EAL LF M E
Sbjct: 663 FVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAE 722
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G +P+ +A LSAC + G L+LG + V F +LGTAL+ MY K G+ +A
Sbjct: 723 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEA 782
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F M +++I WNAMI GL GH + A L ++EK + ND TF+G+L +C H
Sbjct: 783 WVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHT 842
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G I GR+ F +M ++Y I P+IEHYGCMVDLL R G + EA +L+ M + V+ GA
Sbjct: 843 GLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 902
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE----AESMKMQLEI 441
LL CK H N E+AE V+K++I LEP N G YV+LSN+Y+ ++ K++L++
Sbjct: 903 LLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDM 957
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 152/300 (50%), Gaps = 3/300 (1%)
Query: 113 PNQHTFTFVLKACSNV-RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
P+ T LK+ S + L +Q+H K + HV+ L+ Y+ L+ A++
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFDE+ + + WT +I+ Y + EA+ + G P+S T VL+ACA+
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L GE V + G + TA V +Y K G +AKA+ +FD M ++ W AM+ G
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
AS+GH EALDLF ++ E + P+ G LSAC G +D+GRQ + ++
Sbjct: 703 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 762
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ ++D+ +CG +EA + ++M K D+++W A++ G+ ++A +V ++
Sbjct: 763 PVLGTA-LIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMILGLGMTGHEKIAFALVGQM 820
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/442 (33%), Positives = 243/442 (54%), Gaps = 34/442 (7%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++HA + + D + AS LL + G + +A ++F+ + +WN ++R
Sbjct: 66 RKVHAAAVKTGFRWDAYTASSLLEM--YTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYI 123
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK-------- 143
A+ L M R+G P++ T + ACS L+ ++I ++
Sbjct: 124 RCGRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGVFGFSLPV 183
Query: 144 SGLDLDLHVVN----------------------CLVRCYSVSSDLNNARQVFDEIRNRTL 181
+ LD++ N LV Y+V+ L+ AR +F + + L
Sbjct: 184 ANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDL 243
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
+WT MI+ Q EAL LF M ++ EP+ T+ ++L+ CA G L+ GE +H +
Sbjct: 244 ILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQY 303
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ R ++ A+LGTAL+ MY+K G + K+ +F M R+ A W A+I GLA++G A +A
Sbjct: 304 AEGRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKA 363
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L+LF ++++ + P+ ITF+GVL+ACCH G +D GR+ F +MK +Y IEP+IEHY C+V+
Sbjct: 364 LELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVN 423
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVV-MWGALLAACKNHGNIEVAERVVKEIIALE-PNNH 419
LLG G + EAE+LI+ M D + ++GALL ACK +GN+E++ER+ K I + N
Sbjct: 424 LLGHAGLLYEAEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNP 483
Query: 420 GVYVVLSNMYAEAESMKMQLEI 441
V V++SN+YA A + + +
Sbjct: 484 DVNVLMSNVYATASRWEESIRV 505
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 40/362 (11%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N LIR A + + + +Y ++R G + +T+ FVL+A ++ +++H K
Sbjct: 15 NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAAVK 74
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+G D + + L+ Y++ ++ AR+VFDE+ R L +W M+ Y + R A+ L
Sbjct: 75 TGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVAL 134
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK-MRGFEMGAILGTALVHMYT 262
++M G P+ VTL + ++AC+++G L LG ++ ++ + GF + + AL+ MYT
Sbjct: 135 AEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGVFGFSLP--VANALLDMYT 192
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLA----------------------------- 293
KNG L +A +F MPERNI +W ++SG A
Sbjct: 193 KNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINA 252
Query: 294 --SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
HG EEAL LFR ++ +++ P+ T V +L+ C + G +D G I + G
Sbjct: 253 CVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIH---QYAEGRNM 309
Query: 352 KIEHY--GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
KI+ ++++ +CG V ++ ++ RM + D W A++ +G A + +
Sbjct: 310 KIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGR-DAAAWTAIICGLATNGQASKALELFE 368
Query: 410 EI 411
E+
Sbjct: 369 EM 370
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 219/402 (54%), Gaps = 3/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K IH + + D + L++ A G + A FN + S + WN+LI A
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYA--KCGFFTAALTTFNRMSSRDIVTWNSLINGYA 507
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+P AI ++ +R + P+ T V+ AC+ + L+ IH + K G + D H
Sbjct: 508 QIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCH 567
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ Y+ L +A +F++ V W +I+ Y Q+ A EA+ F QM +E
Sbjct: 568 VKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLE 627
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
F PNSVT SVL A A G H + GF ++G +L+ MY K G L +
Sbjct: 628 NFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYS 687
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ LF+ M ++ +WNAM+SG A HGH + A+ LF +++ Q+ + ++FV VLSAC HA
Sbjct: 688 EKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHA 747
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G ++ GR+IF SM Y I+P +EHY CMVDLLGR G E IK M +PD +WGA
Sbjct: 748 GLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGA 807
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LL +C+ H N+++ E + ++ LEP N +VVLS++YA++
Sbjct: 808 LLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQS 849
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 212/399 (53%), Gaps = 9/399 (2%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L CK ++ L QIHAQ+I+S + H + + L+ +L DL A +F+S +P+
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSG-FKHHHSITHLINLYSLFHKCDL--ARSVFDSTPNPSR 94
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+WN++IRA S ++A+ +Y M G P+++TFTFVLKAC+ +L H
Sbjct: 95 ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGE 154
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ + GL+ D+ + LV YS DL AR+VFD++ R + W MI+G +QS EA
Sbjct: 155 IDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEA 214
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ F M + G EP+SV+L ++ + +EL +H +V R F + + L+ +
Sbjct: 215 VDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF--SSAVSNGLIDL 272
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y+K G + A+ +FD M +++ +W M++G A +G E L+LF K++ + N ++
Sbjct: 273 YSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V A ++ G++I G + I+ I ++ + +CG+ +A++L +
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQ-QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQ 391
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPN 417
+ D+V W A++AA G E A + +E+ ++PN
Sbjct: 392 GR-DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 167/345 (48%), Gaps = 1/345 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S GD+ A R+F+ + + W T++ A + + + L+ M+ N+ +
Sbjct: 274 SKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAV 333
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
A + L K+IH + +D D+ V L+ Y+ + A+Q+F ++ R
Sbjct: 334 SAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR 393
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L W+ +I+ Q+ EAL LF +M + +PN VTL S+L ACA L+LG+ +H
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
F + GTALV MY K G A F+ M R+I TWN++I+G A G
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
A+D+F KL I P+ T VGV+ AC +D G I G + ++ G E +
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNAL 572
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+D+ +CG + AE L + + D V W ++AA +G+ + A
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 169/333 (50%), Gaps = 4/333 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S GDL A +F+ + + WN +I + S +P +A+ + +M+ G P+ +
Sbjct: 175 SKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLL 234
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+ + ++ C+ IH +V + D V N L+ YS D++ AR+VFD++ ++
Sbjct: 235 NLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQ 292
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W TM++GYA + E L LFD+M + N V+ S A A++ LE G+++H
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ + ++ T L+ MY K G KAK LF + R++ W+A+I+ L G+ E
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL LF++++ +++ PN +T + +L AC + +G+ I + ++ + +
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA-DMDSDLSTGTAL 471
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
V + +CG A RM + D+V W +L+
Sbjct: 472 VSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLI 503
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 227/415 (54%), Gaps = 8/415 (1%)
Query: 32 KQIHAQMI-ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q+HA+ + + S H S L + + G L A R+F+ + P+ W LI A
Sbjct: 570 EQLHARSLKLPSHTNPHVLTSLLSLY---AKCGLLHRAQRVFDEMPHPSTVPWTALITAY 626
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ + +A+ + N G P+ T VL AC+ + L + + + G+ +
Sbjct: 627 MDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSV 686
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V V Y ++ AR+VFD++R++ W M+ GYA + EAL LF M E
Sbjct: 687 FVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAE 746
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G +P+ +A LSAC + G L+LG + V F +LGTAL+ MY K G+ +A
Sbjct: 747 GMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEA 806
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F M +++I WNAMI GL GH + A L ++EK + ND TF+G+L +C H
Sbjct: 807 WVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHT 866
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G I GR+ F +M ++Y I P+IEHYGCMVDLL R G + EA +L+ M + V+ GA
Sbjct: 867 GLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGA 926
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE----AESMKMQLEI 441
LL CK H N E+AE V+K++I LEP N G YV+LSN+Y+ ++ K++L++
Sbjct: 927 LLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDM 981
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 152/300 (50%), Gaps = 3/300 (1%)
Query: 113 PNQHTFTFVLKACSNV-RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
P+ T LK+ S + L +Q+H K + HV+ L+ Y+ L+ A++
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFDE+ + + WT +I+ Y + EA+ + G P+S T VL+ACA+
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L GE V + G + TA V +Y K G +AKA+ +FD M ++ W AM+ G
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
AS+GH EALDLF ++ E + P+ G LSAC G +D+GRQ + ++
Sbjct: 727 YASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDN 786
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ ++D+ +CG +EA + ++M K D+++W A++ G+ ++A +V ++
Sbjct: 787 PVLGTA-LIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMILGLGMTGHEKIAFALVGQM 844
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 189/288 (65%)
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
NCL+ Y +L A +F+++ + + WTTMI GY+Q+ R EA+ +F +M+ EG
Sbjct: 225 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 284
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P+ VT+++V+SACA G LE+G++VH++ GF + +G+ALV MY+K G+L +A +
Sbjct: 285 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 344
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F ++P++N+ WN++I GLA+HG A+EAL +F K+E E + PN +TFV V +AC HAG +
Sbjct: 345 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 404
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
D GR+I+ SM Y I +EHYG MV L + G + EA ELI M ++P+ V+WGALL
Sbjct: 405 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 464
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
C+ H N+ +AE +++ LEP N G Y +L +MYAE + EI
Sbjct: 465 GCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEI 512
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 194/408 (47%), Gaps = 49/408 (12%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
L P L + +C + L+ A MI +S QD ++ + C DL+ +T
Sbjct: 26 LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKCLDLAVST--M 83
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+Q PN F++N L + + +P +++ LY+ M R +P+ +T++ ++KA S
Sbjct: 84 TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFG 143
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+ + H+ K G + + L+ YS + + AR+VFDE+ R WTTM+S Y
Sbjct: 144 --ESLQAHIWKFGFGFHVKIQTTLIDFYSATGGIREARKVFDEMPERDDIAWTTMVSAYR 201
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ + A L +QM E N T S CL
Sbjct: 202 RVLDMDSANSLANQMS----EKNEAT----------SNCL-------------------- 227
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
++ Y G L +A++LF+ MP ++I +W MI G + + EA+ +F K+ +E
Sbjct: 228 -----INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 282
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
I+P+++T V+SAC H G +++G+++ +++ + ++ I +VD+ +CG LE
Sbjct: 283 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIG--SALVDMYSKCGS-LE 339
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPN 417
L+ + K ++ W +++ HG + A ++ E+ +++PN
Sbjct: 340 RALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 387
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 124/248 (50%), Gaps = 2/248 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+L A LFN + + W T+I+ + + +AI ++ M G P++ T + V+
Sbjct: 235 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 294
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+++ L K++H + ++G LD+++ + LV YS L A VF + + L
Sbjct: 295 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 354
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VF 241
W ++I G A A EAL +F +M ME +PN+VT SV +AC +G ++ G +++
Sbjct: 355 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 414
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEE 300
+ +VH+++K G + +A L +M E N W A++ G H +
Sbjct: 415 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVI 474
Query: 301 ALDLFRKL 308
A F KL
Sbjct: 475 AEIAFNKL 482
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 35/195 (17%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K++H + + + D + S L+ S G L A +F ++ N F WN++I A
Sbjct: 307 KEVHMYTLQNGFVLDVYIGSALVDM--YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 364
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A+ ++ M PN TF V AC++ ++ ++I+
Sbjct: 365 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY------------- 411
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
++ YS+ S++ + + M+ ++++ EAL L M
Sbjct: 412 --RSMIDDYSIVSNVEH---------------YGGMVHLFSKAGLIYEALELIGNM---E 451
Query: 212 FEPNSVTLASVLSAC 226
FEPN+V ++L C
Sbjct: 452 FEPNAVIWGALLDGC 466
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 189/288 (65%)
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
NCL+ Y +L A +F+++ + + WTTMI GY+Q+ R EA+ +F +M+ EG
Sbjct: 225 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 284
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P+ VT+++V+SACA G LE+G++VH++ GF + +G+ALV MY+K G+L +A +
Sbjct: 285 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 344
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F ++P++N+ WN++I GLA+HG A+EAL +F K+E E + PN +TFV V +AC HAG +
Sbjct: 345 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 404
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
D GR+I+ SM Y I +EHYG MV L + G + EA ELI M ++P+ V+WGALL
Sbjct: 405 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 464
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
C+ H N+ +AE +++ LEP N G Y +L +MYAE + EI
Sbjct: 465 GCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEI 512
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 194/408 (47%), Gaps = 49/408 (12%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
L P L + +C + L+ A MI +S QD ++ + C DL+ +T
Sbjct: 26 LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVST--M 83
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+Q PN F++N L + + +P +++ LY+ M R +P+ +T++ ++KA S
Sbjct: 84 TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFG 143
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+ + H+ K G + + L+ YS + + AR+VFDE+ R WTTM+S Y
Sbjct: 144 --ESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR 201
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ + A L +QM E N T S CL
Sbjct: 202 RVLDMDSANSLANQMS----EKNEAT----------SNCL-------------------- 227
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
++ Y G L +A++LF+ MP ++I +W MI G + + EA+ +F K+ +E
Sbjct: 228 -----INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 282
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
I+P+++T V+SAC H G +++G+++ +++ + ++ I +VD+ +CG LE
Sbjct: 283 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIG--SALVDMYSKCGS-LE 339
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPN 417
L+ + K ++ W +++ HG + A ++ E+ +++PN
Sbjct: 340 RALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 387
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+L A LFN + + W T+I+ + + +AI ++ M G P++ T + V+
Sbjct: 235 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 294
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+++ L K++H + ++G LD+++ + LV YS L A VF + + L
Sbjct: 295 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 354
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VF 241
W ++I G A A EAL +F +M ME +PN+VT SV +AC +G ++ G +++
Sbjct: 355 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 414
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEE 300
+ +VH+++K G + +A L +M E N W A++ G H +
Sbjct: 415 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVI 474
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
A F KL + + + F+ V + DV +I G M+ + GIE
Sbjct: 475 AEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVA-EIRGRMREL-GIE 522
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 35/195 (17%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K++H + + + D + S L+ S G L A +F ++ N F WN++I A
Sbjct: 307 KEVHMYTLQNGFVLDVYIGSALVDM--YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 364
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A+ ++ M PN TF V AC++ ++ ++I+
Sbjct: 365 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY------------- 411
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
++ YS+ S++ + + M+ ++++ EAL L M
Sbjct: 412 --RSMIDDYSIVSNVEH---------------YGGMVHLFSKAGLIYEALELIGNM---E 451
Query: 212 FEPNSVTLASVLSAC 226
FEPN+V ++L C
Sbjct: 452 FEPNAVIWGALLDGC 466
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 241/471 (51%), Gaps = 55/471 (11%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA-LSSSGDLSYATR 70
PL P +LL ++ H L+ +HA +++S R+ + S L AF A L+SS LSYA R
Sbjct: 1209 PLLRDPTTLLPSLAEASH-LRALHAHLVVSGRLA---SPSHLAAFLASLASSNHLSYA-R 1263
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK------- 123
L + N IRA A P + R P+ ++ F+++
Sbjct: 1264 LVLPQRPATLLAHNAFIRALARGPRP---CLAFAAFRDLPLPPDHYSLNFLVRAATALVA 1320
Query: 124 -------ACSNVRSLNCCKQIHTHVSKSGLDLDLHV------------------------ 152
+ V + H + G D HV
Sbjct: 1321 SAAEEKHVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEI 1380
Query: 153 -------VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
V +V + D++ AR +FD + R W+ MI+GY R+ EALMLFD
Sbjct: 1381 ACPDVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFD 1440
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+ML G TL SVL+ACAQ G L+ G+ VH +V+ RG +M LGTALV MY+K G
Sbjct: 1441 EMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCG 1500
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
A+ A +F+SM ERN+ TW + +SGLA +G E L LF+++E I PN ++FV VL
Sbjct: 1501 AVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLR 1560
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
C AG +D GR F SM + YG++P EHYGCMVDL GR G++ +A I M +P
Sbjct: 1561 GCSMAGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHE 1619
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+WGALL A + H ++++ + + +++A+E N +V LSN+YAE+++ K
Sbjct: 1620 GVWGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWK 1670
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 243/432 (56%), Gaps = 41/432 (9%)
Query: 34 IHAQMIISSRIQDHFAASRLL----AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
+HA+++ D F ++ L+ FC +L +A ++F+ + + WN+LI
Sbjct: 817 VHARVLKLGFDSDLFVSNALIHGYAGFC------ELGFARKVFDEMSERDLVSWNSLICG 870
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ + ++ MR + T V+ AC+ + + ++ ++ +++D
Sbjct: 871 YGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVD 930
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL--------------NV------------ 183
+++ N L+ Y S ++ AR+VFD +R+R + N+
Sbjct: 931 VYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPH 990
Query: 184 -----WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
WT+MIS Y+Q+ + +A+ LF +M++ +P+ +T+ASVLSACA G L++GE V
Sbjct: 991 RDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAV 1050
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H +++ +G AL+ MY K GA+ K ++F+ M +R+ +W ++I+GLA +G A
Sbjct: 1051 HEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSA 1110
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
+ AL+LF + +E + P TFVGVL AC HAG +D G + F SM+RVYG+ P+++HYGC
Sbjct: 1111 DSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGC 1170
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
+VDLL R G + A E IKRM PDVV+W LL+A + HGN+ +AE K+++ +P+N
Sbjct: 1171 VVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSN 1230
Query: 419 HGVYVVLSNMYA 430
G Y++ SN YA
Sbjct: 1231 SGNYILSSNTYA 1242
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 189/383 (49%), Gaps = 35/383 (9%)
Query: 53 LLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
LL ALS + L A LF I P WN +IR + + P +AI Y M
Sbjct: 735 LLKSYALSPTNILK-ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALF 793
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
N T+ F+LKAC+ + +++C +H V K G D DL V N L+ Y+ +L AR+V
Sbjct: 794 GNNLTYPFLLKACARISNVSCT-TVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKV 852
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FDE+ R L W ++I GY + R +E L++F++M M + ++VT+ V+ AC G
Sbjct: 853 FDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEW 912
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+ + + +++ E+ LG L+ MY + + A+ +FD M +RN+ +WNAMI G
Sbjct: 913 GVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGY 972
Query: 293 ASHG-------------HAE------------------EALDLFRKLEKEQIVPNDITFV 321
G H + +A+ LF+++ ++ P++IT
Sbjct: 973 GKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVA 1032
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
VLSAC H G +DVG + +++ Y + I ++D+ +CG V + + + M
Sbjct: 1033 SVLSACAHIGALDVGEAVHEYIRK-YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEM-G 1090
Query: 382 KPDVVMWGALLAACKNHGNIEVA 404
K D V W +++A +G+ + A
Sbjct: 1091 KRDSVSWTSVIAGLAVNGSADSA 1113
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 243/468 (51%), Gaps = 41/468 (8%)
Query: 8 LRQPPLP----IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
LR+ LP +P + + ++ H I ++ F + LL A S+G
Sbjct: 99 LRRGILPNEFTLPFVLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSA--SAG 156
Query: 64 DLSYATRLFNSIQ-SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
L + RLF + N WNT+I A + +A L+ MRR G + TF +L
Sbjct: 157 SLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLL 216
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL---------------- 166
CS +L + +H H+ SG +DL + N LV Y DL
Sbjct: 217 LVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVV 276
Query: 167 ---------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ AR F+++ R + W MIS Y Q R E L L+++M G
Sbjct: 277 SWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLG 336
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+ VTLA VLS Q+G L G +H +++ + G + +L+ MY + G + +
Sbjct: 337 LTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSI 396
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+LF MP +N +WN +I LA HG A+EA+ FR + + P++ITFVG+LSAC H G
Sbjct: 397 SLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGG 456
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G+ F +M+ +Y ++P++EHY CMVDLLGR G + +A +LIK M KPDVV+WGAL
Sbjct: 457 LLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGAL 516
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA---ESMK 436
+ AC+ HG++E+ + +K+++ LE N G++V++SN+ E E MK
Sbjct: 517 IGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMK 564
Score = 198 bits (504), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 218/443 (49%), Gaps = 41/443 (9%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSS-SGD--LSYAT 69
P L LL +C+S+ L Q+HA ++ +L+A +CALS +GD L +A
Sbjct: 3 PCHVLELL-QQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHAR 61
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
R+F+ + P+ F +N+LIRA ++S P +A+ L+ ++ R G PN+ T FVLKACS R
Sbjct: 62 RMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRAR 121
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR-NRTLNVWTTMI 188
+ H K G + V N L+ + + L ++R++F E+ +R + W TMI
Sbjct: 122 AAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMI 181
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
G AQ+ +EA LF +M +G + T S+L C++ G LE+G VH + G
Sbjct: 182 GGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSR 241
Query: 249 MGAILGTALVHMYTKNG-------------------------ALAK------AKALFDSM 277
+ ILG ALV MY K G ALAK A+ F+ M
Sbjct: 242 VDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQM 301
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
PERNI +WNAMIS G E L L+ +++ + P+++T GVLS G + GR
Sbjct: 302 PERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGR 361
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
I ++ + +P + ++D+ RCG+V + L M K + + W ++ A
Sbjct: 362 MIHCYIQDSFS-DPGVTVLNSLIDMYARCGQVDTSISLFTEMPNK-NTISWNVIIGALAM 419
Query: 398 HGNIEVAERVVKEII--ALEPNN 418
HG + A + ++ A P+
Sbjct: 420 HGRAQEAVMFFRAMVSDAFSPDE 442
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 232/419 (55%), Gaps = 33/419 (7%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+D F + L+ A ++ ++ A R+F+ + + W ++ + ++ N + + L
Sbjct: 26 EDGFVGTALVG--AYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLN 83
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M+R+ P+Q VL C + R L K IH+++ S + +D + + L+ Y+
Sbjct: 84 KMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCM 143
Query: 165 DLNNA-------------------------------RQVFDEIRNRTLNVWTTMISGYAQ 193
D+ A R +F+ + + + W+ MIS YA+
Sbjct: 144 DMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAE 203
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ + +E L LF++M G P+ +T+ SV+SACA G L+ +H V GF +
Sbjct: 204 NNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSI 263
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
AL+ M++K G+L A +F++MP +N+ TW +MI+ A HG AL LF +++ E +
Sbjct: 264 CNALIDMFSKCGSLTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGV 323
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN +TF+ +L ACCHAG + GR +F M + Y IEPK EHYGCMVDL+GR + EA
Sbjct: 324 EPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAV 383
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+LI+ M +P+V +WG+LLAAC HG+IE+ E K+I+ L+PN+ G YV+LSN++A++
Sbjct: 384 DLIESMHIRPNVAIWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKS 442
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 33/309 (10%)
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+A + R + + H + G D D V LV Y+ + AR+VFD + R L
Sbjct: 1 RAAARARWTDTVRGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLV 60
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W M+ Y + E L+L ++M P+ V LA+VLS C + L G+ +H ++
Sbjct: 61 AWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYI 120
Query: 243 KMRGFEMGAILGTALVHM-------------------------------YTKNGALAKAK 271
++ + A L +AL++M Y KNG + A+
Sbjct: 121 QVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIAR 180
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
++F+ M E+++ +W+AMIS A + E L+LF K++ + P++IT + V+SAC + G
Sbjct: 181 SIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIG 240
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D R I S+ +G + ++D+ +CG + A + M + +V+ W ++
Sbjct: 241 SLDKARWIH-SIVGNHGFYKILSICNALIDMFSKCGSLTLALNMFNAMP-RKNVITWTSM 298
Query: 392 LAACKNHGN 400
+AA HG+
Sbjct: 299 IAAFAMHGD 307
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 2/262 (0%)
Query: 40 ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKA 99
I S +Q S C + +G + A +FN + + W+ +I A A + P +
Sbjct: 151 IYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEV 210
Query: 100 IFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC 159
+ L+ M+ G +P++ T V+ AC+N+ SL+ + IH+ V G L + N L+
Sbjct: 211 LNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDM 270
Query: 160 YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
+S L A +F+ + + + WT+MI+ +A AL LF QM EG EPN VT
Sbjct: 271 FSKCGSLTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTF 330
Query: 220 ASVLSACAQSGCLELGEKV-HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
+L AC +G + G + ++ E +V + + + +A L +SM
Sbjct: 331 LVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMH 390
Query: 279 ER-NIATWNAMISGLASHGHAE 299
R N+A W ++++ HG E
Sbjct: 391 IRPNVAIWGSLLAACWMHGDIE 412
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G + +GTALV Y +A+A+ +FD MPER++ W M+ + + E L L
Sbjct: 23 GADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLL 82
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
K+++ ++VP+ + VLS C H + G+ I S +V I ++++
Sbjct: 83 NKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIH-SYIQVSDIFVDARLSSALINMYAS 141
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
C + A+++ M + D+V A++ +G IE+A + +
Sbjct: 142 CMDMEMADKIYSGMQ-RKDLVSSTAMVCGYAKNGKIEIARSIFNHM 186
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 213/370 (57%), Gaps = 24/370 (6%)
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
TL R SS +F + +R+ + + + F LKAC+ SL KQ+H V
Sbjct: 40 TLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINF 99
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G + + + L+ YS + ++ +A +FDEI ++ L WT++IS Y + R N+AL LF
Sbjct: 100 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLF 159
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
QM M+ +P+ VT+ LSACA G L++GE +H +++ RG + L +L++MY+K
Sbjct: 160 RQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKC 219
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL---------------- 308
G + A+ LFD ++++ TW +MI G A HG AEEAL LF ++
Sbjct: 220 GEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEH 279
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
E ++PND+TF+GVL AC HAG ++ G+Q F SMK Y + P+I H+GCMVDLL R G
Sbjct: 280 ESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGL 339
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHG--------NIEVAERVVKEIIALEPNNHG 420
+ EA E I +M +P+ V+W LL AC G NI++ ++++ LEP++ G
Sbjct: 340 LTEAYEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIYSEARRQLLELEPSHVG 399
Query: 421 VYVVLSNMYA 430
V++SN+YA
Sbjct: 400 DNVIMSNLYA 409
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 27/313 (8%)
Query: 8 LRQPPLPIPPLSLL--ADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
LR+ P I SL+ C S+ + KQ+HA +I F + L++ S++
Sbjct: 61 LRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISM--YSAT 118
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+++ A +F+ I S N W ++I A + P+KA+ L+ M+ P+ T T L
Sbjct: 119 GNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVAL 178
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+++ +L+ + IH ++ GLD DL + N L+ YS ++ AR++FD + + +
Sbjct: 179 SACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVT 238
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFE----------------PNSVTLASVLSAC 226
WT+MI G+A +A EAL LF +M PN VT VL AC
Sbjct: 239 TWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEHESSLVLPNDVTFMGVLMAC 298
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGT--ALVHMYTKNGALAKAKALFDSMPER-NIA 283
+ +G +E G K H + + + +V + + G L +A MP R N
Sbjct: 299 SHAGLVEEG-KQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAV 357
Query: 284 TWNAMISGLASHG 296
W ++ + G
Sbjct: 358 VWRTLLGACSLQG 370
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 243/431 (56%), Gaps = 7/431 (1%)
Query: 7 SLRQPPLPIPPLSLLADKC---KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
+++ P + ++L ++C +++ + +++HA MI + + + ++RL+ +
Sbjct: 2 AIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIIL--YTKCE 59
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
L A +F+ ++ N W +I + +A+ L++ M R+ PN+ TF VL
Sbjct: 60 CLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLS 119
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
+C+ +QIH+H+ K + + V + L+ Y+ + ++ AR VF+ + R +
Sbjct: 120 SCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 179
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
T +ISGYAQ EAL LF ++ EG N VT AS+L+A + L+ G++VH V
Sbjct: 180 CTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVL 239
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
+L +L+ MY+K G L A+ +F++MP R + +WNAM+ G + HG E +
Sbjct: 240 RCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVK 299
Query: 304 LFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG-IEPKIEHYGCMVD 361
LF+ + +E ++ P+ +TF+ VLS C H G D G ++F M IE IEHYGC++D
Sbjct: 300 LFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVID 359
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LLGR G+V EA ELIK+M ++P +WG+LL AC+ H N + E V ++ +EP N G
Sbjct: 360 LLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGN 419
Query: 422 YVVLSNMYAEA 432
YV+LSN+YA A
Sbjct: 420 YVILSNLYASA 430
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 212/378 (56%)
Query: 57 CALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQH 116
C S G++ A LF I P+ +N +I + + ++ L+ + +G N
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSS 309
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
+ ++ L+ + IH +KSG+ + V L YS +++ +AR +FDE
Sbjct: 310 SIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDES 369
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
++L W MISGYAQ+ +A+ LF +M PN VT+ S+LSACAQ G L LG+
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
VH + FE + TAL+ MY K G++ +A+ LF MPE+N TWNAMISG HG
Sbjct: 430 WVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHG 489
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ EAL+LF ++ ++ P +TF+ VL AC HAG + G +IF SM +G EP EHY
Sbjct: 490 YGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHY 549
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
CMVDLLGR G + +A + I++M +P +WGALL AC H + +A ++ L+P
Sbjct: 550 ACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDP 609
Query: 417 NNHGVYVVLSNMYAEAES 434
N G YV+LSN+Y+ ++
Sbjct: 610 QNVGYYVLLSNIYSAGQN 627
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 192/392 (48%), Gaps = 5/392 (1%)
Query: 39 IISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDK 98
I++ D F S ++A C S ++ A ++F+ + + +WNT++ + D+
Sbjct: 133 IVAGFGSDLFVGSAIVA-CYFKFS-RVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDE 190
Query: 99 AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR 158
AI ++ +M + G + T VL + ++ L I K G +V+ L
Sbjct: 191 AILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLAC 250
Query: 159 CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVT 218
YS ++ AR +F +I L + MISGY + ++ LF ++L+ G + NS +
Sbjct: 251 LYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSS 310
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
+ ++ G L L +H F G + + TAL +Y++ + A+ LFD
Sbjct: 311 IVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESS 370
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
E+++A+WNAMISG A +G E+A+ LF++++K ++ PN +T +LSAC G + +G+
Sbjct: 371 EKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW 430
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ + R E I ++D+ +CG + EA+ L M K + V W A+++ H
Sbjct: 431 VHDLINR-ESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK-NAVTWNAMISGYGLH 488
Query: 399 GNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
G A + E++ + GV LS +YA
Sbjct: 489 GYGHEALNLFNEMLHSRVSPTGV-TFLSVLYA 519
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 213/451 (47%), Gaps = 42/451 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L ++ ++HQL Q HAQ+I++ D ++L LS + A+ LF++I +P+
Sbjct: 16 LINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTH--KLSHLKAIDQASLLFSTIPNPDL 73
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F++N LIRA + + +P A+ LY ++R+ T P+ T+ FV+ S++
Sbjct: 74 FLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSI 133
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+G DL V + +V CY S + AR+VFD + R +W TM+SG ++ +E
Sbjct: 134 ---VAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDE 190
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
A+++F M+ G +S T+A+VL A+ L LG + GF A + T L
Sbjct: 191 AILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLAC 250
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
+Y+K G + A+ LF + + ++ ++NAMISG + E ++ LF++L N +
Sbjct: 251 LYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSS 310
Query: 320 FVGVLSACCHAGFIDVGRQIFG---------------SMKRVYGIEPKIE---------- 354
VG++ G + + R I G ++ VY +IE
Sbjct: 311 IVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESS 370
Query: 355 -----HYGCMVDLLGRCGKVLEAEELIKRM---VWKPDVVMWGALLAACKNHGNIEVAER 406
+ M+ + G +A L + M +P+ V ++L+AC G + + +
Sbjct: 371 EKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG-K 429
Query: 407 VVKEIIALEPNNHGVYV--VLSNMYAEAESM 435
V ++I E ++V L +MYA+ S+
Sbjct: 430 WVHDLINRESFESNIFVSTALIDMYAKCGSI 460
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 9/308 (2%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
M G A ++ F ++ S + LN Q H + +GL DL V L S
Sbjct: 1 MLYRGIASTRNLFLTLINRVSTLHQLN---QTHAQIILNGLHNDLVTVTKLTHKLSHLKA 57
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVLS 224
++ A +F I N L ++ +I ++ + + A+ L+ + EP++ T A V+S
Sbjct: 58 IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVIS 117
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
+ G L + + GF +G+A+V Y K +A A+ +FD M ER+
Sbjct: 118 GASSLGLGLLLHAHSI---VAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVL 174
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN M+SGL + +EA+ +F + K I + T VL + +G I
Sbjct: 175 WNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAM 234
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+V G + L +CG++ E L+ + +PD+V + A+++ + E +
Sbjct: 235 KV-GFHSHAYVITGLACLYSKCGEI-ETARLLFGQIGQPDLVSYNAMISGYTCNNETESS 292
Query: 405 ERVVKEII 412
R+ KE++
Sbjct: 293 VRLFKELL 300
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 235/452 (51%), Gaps = 43/452 (9%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L C + +++Q+HA + ++ F +SRLLA + DL YA +F+ IQ +
Sbjct: 22 LFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSL 81
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
WNT+I+ + I L+ + + P+ T V+K C+ + + KQIH
Sbjct: 82 IHWNTIIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGL 140
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT-----------MIS 189
K G D+ V LV YS +++ AR+VFD + ++ + +W + MI+
Sbjct: 141 ALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMIN 200
Query: 190 GYAQSFRANEALMLFDQM----------LMEGFE---------------------PNSVT 218
GY +S + AL LF QM ++ G+E P+ T
Sbjct: 201 GYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHAT 260
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
L SVLSA + L G +H +++ GFE+ ILGT+L+ MY K G + A +F ++
Sbjct: 261 LVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQ 320
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
++ + W A+I GL HG A AL LF ++ K + PN I F+GVL+AC HAG +D GRQ
Sbjct: 321 KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ 380
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
F M Y IEP +EHYGC+VD+L R G + EA+ I+ M P+ V+W +LL +NH
Sbjct: 381 YFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNH 440
Query: 399 GNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
G I++ E + +I + P G Y++LSNMYA
Sbjct: 441 GKIDIGEYAAQRVIEVAPETIGCYILLSNMYA 472
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 239/410 (58%), Gaps = 2/410 (0%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L K K + Q K HAQ+++ D ++ L+ S G + +A ++F+ + S +
Sbjct: 73 LCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINM--YSKCGSVDFARQVFDEMPSRSL 130
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
WNT+I + + ++A+ L + M+R G ++ T + VL AC+ +L+ C+ +H
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
K+ +DL++ V L+ Y+ + +A VF+ + +R++ W++M +GY Q+ +A
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L LF + G + + ++SV+ ACA + G++V+ + GF + ++L+ M
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDM 310
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G + ++ +F + +RN+ WNAMISGL+ H + E + LF K+++ + PND+TF
Sbjct: 311 YAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTF 370
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V VLSAC H G + G++ F M + + + P + HY CMVD L R G++ EA +LI ++
Sbjct: 371 VSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLP 430
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ MWG+LLA+C+ HGN+E+AE K++ +EP+N G Y++LSNMYA
Sbjct: 431 FNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYA 480
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 4/308 (1%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+LK C+ + L K H + GL DL N L+ YS ++ ARQVFDE+ +R+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
L W TMI Q+ NEAL L QM EG + T++SVL ACA L + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
F ++ + TAL+ +Y K G + A +F+SMP+R++ TW++M +G + E+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL LFRK + + + V+ AC + G+Q+ + + G I ++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKS-GFCSNIFVASSLI 308
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAERVVK-EIIALEPNN 418
D+ +CG + E+ ++ R V K +VV+W A+++ H ++EV K + + L PN+
Sbjct: 309 DMYAKCGGIEESYKVF-RDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367
Query: 419 HGVYVVLS 426
VLS
Sbjct: 368 VTFVSVLS 375
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 214/363 (58%), Gaps = 1/363 (0%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +F ++ + W ++ S+ + K ++ MR P+ F ++ C
Sbjct: 179 ALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKL 238
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+L +H+ + KSG D + N LV Y+ DL +AR+VFD + +++ +WT+M
Sbjct: 239 SGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSM 298
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
ISGYAQ NEAL LF+ +L PN +TLA+VLSACA+ G L +GE++ ++ + G
Sbjct: 299 ISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGL 358
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ T+L+HM+ K G++ KA+ALF+ +P +++A W+AMI+G A HG +EAL+LF K
Sbjct: 359 GSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHK 418
Query: 308 LEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
++ E I P+ I + VL AC H+G I+ G + F SM++ +GIEP I+HY C+VDLLGR
Sbjct: 419 MQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRA 478
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
G V A I+ M +W L+AC H N+E+ E K + LEP + G +V+++
Sbjct: 479 GYVELALRTIQEMPVLVQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMT 538
Query: 427 NMY 429
N+Y
Sbjct: 539 NLY 541
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 185/379 (48%), Gaps = 14/379 (3%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLL---AFCALSSSGDLSYATRLFNSIQSPNH 80
K S+ ++H+ ++++ F + L+ + C S L + S+ S
Sbjct: 40 KLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQMPIKSLVS--- 96
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
WN++I A + D++ + M+ G + TFT L +CS + L+ IH +
Sbjct: 97 --WNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCSLPQGLS----IHGY 150
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
++K GLDL L + N ++ Y + ++ A VF + +++ WT ++ GY + +
Sbjct: 151 ITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKV 210
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+F+QM + P+S+ +++S C SG L L VH + GF+ + LV M
Sbjct: 211 FAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAM 270
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K L A+ +FD++ E+++ W +MISG A G+ EAL LF L + PN++T
Sbjct: 271 YAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTL 330
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
VLSAC G + +G +I + G+ + ++ + +CG + +A+ L +R+
Sbjct: 331 ATVLSACAEMGSLRMGEEI-EQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIP 389
Query: 381 WKPDVVMWGALLAACKNHG 399
K D+ +W A++ HG
Sbjct: 390 NK-DLAVWSAMINGYAVHG 407
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 172/361 (47%), Gaps = 19/361 (5%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
W LI Q SL+ +G ++ TF FVLKAC+ + SL ++H+H+
Sbjct: 6 WKHLIFKQIPSLSS----------HTSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHIL 55
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+G + V LV YS ++AR VFD++ ++L W ++IS + + F +++
Sbjct: 56 LTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFG 115
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
+ QM + G E +S T L++C+ L G +H ++ G ++ L +++ MY
Sbjct: 116 ILKQMQLLGLELSSATFTGFLASCS----LPQGLSIHGYITKLGLDLHLPLANSIMSMYI 171
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
+ + A ++F ++ +++I +W ++ G S G + +F ++ + + P+ I FV
Sbjct: 172 RLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVN 231
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
++S C +G + + + + + G + K +V + +C ++ A + V +
Sbjct: 232 LISCCKLSGNLLLAMLVHSLLLKS-GFDHKDPIDNLLVAMYAKCKDLVSARRVFDA-VHE 289
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLSNMYAEAESMKMQLE 440
V +W ++++ G A + ++ A PN + VLS AE S++M E
Sbjct: 290 KSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSAC-AEMGSLRMGEE 348
Query: 441 I 441
I
Sbjct: 349 I 349
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
DL A R+F+++ + F+W ++I A P++A+ L+ + RT PN+ T VL
Sbjct: 276 DLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLS 335
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
AC+ + SL ++I ++ +GL DL V L+ + + A+ +F+ I N+ L V
Sbjct: 336 ACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAV 395
Query: 184 WTTMISGYAQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W+ MI+GYA EAL LF +M E G +P+++ SVL AC+ SG +E G K F
Sbjct: 396 WSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLK--YFR 453
Query: 243 KMR---GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA-TWNAMISGLASHGHA 298
M+ G E + LV + + G + A MP A W +S +H +
Sbjct: 454 SMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFLSACYTHHNL 513
Query: 299 E 299
E
Sbjct: 514 E 514
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 261/470 (55%), Gaps = 48/470 (10%)
Query: 7 SLRQPPLPIP-------PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCAL 59
S+ P PIP SLL ++ + L+QIHAQ +++ + + + + L C L
Sbjct: 59 SISIPTNPIPIDLPNPQTFSLLLNQRPKLSPLQQIHAQ-VVTQALSSNASLTASLIHCYL 117
Query: 60 SSSGDLSYATRLFNSIQSPNH--FMWNTLIRAQASSLNPDKAIFLYMNMRRTG----FAP 113
+ + A LF+ SP+ +WN +IR + N + I L++ M P
Sbjct: 118 CAKNHPN-ARILFDHYPSPSPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVP 176
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+++TFTFV+ +CS+ SL + +H V KSG + +L+V N ++ SV + + +AR+VF
Sbjct: 177 DEYTFTFVITSCSHQISLIYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVF 236
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF----------- 212
+++ R + WT+++ GYA+ + A LF+ M ++ GF
Sbjct: 237 NQMSERDVFSWTSLLGGYAKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALT 296
Query: 213 -----------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
PN L VLSACA G L+ G +H+++ G + + TAL+ MY
Sbjct: 297 FFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMY 356
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G + A +F+ + +R++ ++ +MISGL+ HG ++AL +F ++ E ++PN+IT +
Sbjct: 357 AKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITIL 416
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL+ C H+G ++ G I +M+ ++GI PKIEHYGC +DLLGR G + A E++K M
Sbjct: 417 GVLNGCSHSGLVEEGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPM 476
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH-GVYVVLSNMYA 430
+PD+V+W ALL+A + H N+ + E+++ I L+ ++H G V+LSN+YA
Sbjct: 477 EPDIVIWRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYA 526
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 245/464 (52%), Gaps = 55/464 (11%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
K++ Q+K+IH+ I + D F + L+ + G ++ A ++FN ++ + WN
Sbjct: 273 KALPQIKEIHSYAIRNGTFADAFVCNALID--TYAKCGSMNDAVKVFNVMEFKDVVSWNA 330
Query: 86 LIRAQASSLNPDKAIFLYMNMRR--------------TGFA------------------- 112
++ S N A L+ NMR+ G+A
Sbjct: 331 MVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDG 390
Query: 113 --PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL------------DLDLHVVNCLVR 158
PN T +L AC+++ +L+ +IH + K L DL V N L+
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALID 450
Query: 159 CYSVSSDLNNARQVFDEIRNRTLNV--WTTMISGYAQSFRANEALMLFDQMLMEGFE--P 214
YS AR +FD I R NV WT MI GYAQ +N+AL +F +M+ + + P
Sbjct: 451 MYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAP 510
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGA-ILGTALVHMYTKNGALAKAKA 272
N+ T++ +L ACA L +G+++H +V + +E + L+ MY+K G + A+
Sbjct: 511 NAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARN 570
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FDSMP+RN +W +M+SG HG +EALD+F K++K VP+DI+F+ +L AC H+G
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGM 630
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+D G F M+R Y + EHY C++DLL RCG++ +A + I+ M +P V+W ALL
Sbjct: 631 VDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALL 690
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+AC+ H N+E+AE + +++ ++ N G Y ++SN+YA A K
Sbjct: 691 SACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWK 734
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 202/483 (41%), Gaps = 78/483 (16%)
Query: 21 LADKCKSMHQLKQIHAQMI---------------ISSRIQDHFAASRLLAFCALSS---S 62
L +C+S++ ++QIH ++I ++ + + + L ++S
Sbjct: 37 LLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVASYLAC 96
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G A + + WN L+R + D+AI + M R G P+ T + L
Sbjct: 97 GATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYAL 156
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC + S C + +H + +G + ++ V N LV YS L +A VFDEI + ++
Sbjct: 157 KACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGID 216
Query: 183 ---VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS------VTLASVLSACAQSGCLE 233
W ++++ + + AL LF +M M E + +++ ++L ACA L
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALP 276
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
+++H + G A + AL+ Y K G++ A +F+ M +++ +WNAM++G
Sbjct: 277 QIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYT 336
Query: 294 SHGHAEEALDLFRKLEKEQI-----------------------------------VPNDI 318
G+ A +LF + KE I PN +
Sbjct: 337 QSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSV 396
Query: 319 TFVGVLSACCHAGFIDVGRQIFG-SMKRV----------YGIEPKIEHYGCMVDLLGRCG 367
T + +LSAC G + G +I S+K+ G + Y ++D+ +C
Sbjct: 397 TIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCR 456
Query: 368 KVLEAEELIKRMVWKP-DVVMWGALLAACKNHGNIEVAERVVKEII----ALEPNNHGVY 422
A + + + +VV W ++ +G+ A ++ E+I A+ PN + +
Sbjct: 457 SFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTIS 516
Query: 423 VVL 425
+L
Sbjct: 517 CIL 519
>gi|302800503|ref|XP_002982009.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
gi|300150451|gb|EFJ17102.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
Length = 604
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 223/415 (53%), Gaps = 2/415 (0%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L + +++ +++HA+++ + F A+ +L G + +R F+ ++
Sbjct: 39 LLLACGRSRNLGNGRRLHARIVATGHQDVMFLANHILIM--YGKCGGMEDLSRAFSEMKR 96
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
N WN +I A A + AI +++ M G P+ TFT VL A + K +
Sbjct: 97 RNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKLV 156
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + G V L+ YS ++ ARQVFDE+ + + W+ MI+ YAQ+
Sbjct: 157 HDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTGHG 216
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EAL +F +M EG + N +T +V+ AC + +H + G E +LGTAL
Sbjct: 217 TEALEMFHRMDAEGIQANVITFVAVVHACVLVARITDARTIHRRIIEAGLESNTVLGTAL 276
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
++MY K G L +AK +FD + ER++ W+A++ A HGH AL LF +++E + PND
Sbjct: 277 LNMYGKCGGLPEAKKIFDKLTERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRPND 336
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+TFVGVL ACCH GF+ GR F S+ R + + P H CM+D+LGR GK+ EAE I
Sbjct: 337 VTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESFIA 396
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
RM K + + W L +C+++G++E +R +++ P+ Y+ L++MY +A
Sbjct: 397 RMPVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLASMYTDA 451
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 230/401 (57%), Gaps = 42/401 (10%)
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNVR 129
LF+ + + WN +I + AI ++ M+ +G P++ T L AC+ ++
Sbjct: 194 LFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALK 253
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
L K+IH H + + + N L+ Y L+ AR VF+E+ ++ + WTTM+S
Sbjct: 254 RLELGKKIH-HYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVS 312
Query: 190 GYA-------------------------------QSFRANEALMLFDQMLMEGFEPNSVT 218
GYA Q R +EA+ LF +M + +P+
Sbjct: 313 GYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFI 372
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
+ S+L+ CAQ+G +E G+ +H F+ + A++GTAL+ MY K G + KA +F +
Sbjct: 373 VVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLR 432
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
++ A+W ++I GLA +G +AL+LF K+++ + P+DITF+GVLSAC H G ++ GR+
Sbjct: 433 VKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRK 492
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD------VVMWGALL 392
F SM+ Y I+PK+EHYGC+VDLLGR G + EAEELIK++ PD V ++G+LL
Sbjct: 493 FFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKI---PDENKAITVPLYGSLL 549
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+AC+ +GN+E+ ERV K+++ E ++ V+ +L+N+YA A+
Sbjct: 550 SACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFAD 590
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 221/447 (49%), Gaps = 66/447 (14%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CKSM LKQIHAQ+ QD + ++L+AFC +G+L+YA ++F I+ P ++N
Sbjct: 47 CKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYN 106
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I+A A N + + L+ +R G P+ T+ FV KA + ++ +++ V+K+
Sbjct: 107 LIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKT 166
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GL+ D +V N L+ Y+ + + + +FDE+ +R + W MISGY + R +A+ +F
Sbjct: 167 GLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVF 226
Query: 205 DQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
+M E G P+ T+ S LSAC LELG+K+H +V+ + I+G AL+ MY K
Sbjct: 227 CRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVR-DNVKFTPIIGNALLDMYCK 285
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD-------------------- 303
G L+ A+A+F+ MP +N+ W M+SG A+ G EEA +
Sbjct: 286 CGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGY 345
Query: 304 -----------LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI--FGSMKRV---- 346
LFR+++ ++ P+ V +L+ C G I+ G+ I F R+
Sbjct: 346 VQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDA 405
Query: 347 ---------YG----IEPKIE-HYG-------------CMVDLLGRCGKVLEAEELIKRM 379
Y IE +E YG C + + G+ K LE +K+
Sbjct: 406 VVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQA 465
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAER 406
+PD + + +L+AC + G +E +
Sbjct: 466 GVRPDDITFIGVLSACSHGGLVEEGRK 492
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 188/398 (47%), Gaps = 26/398 (6%)
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
+P +F+ LI S ++ F TG + Q + LK+C +S+ K
Sbjct: 3 HTPRNFLLLELISRHGLS---RRSKFSTFTNPTTGLS--QQSCISYLKSC---KSMTHLK 54
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYS--VSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
QIH + + GL D+ +N L+ + + +LN A ++F IR L ++ +I +A+
Sbjct: 55 QIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAK 114
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
L+LF ++ +G P++ T V A G + EK+ V G E +
Sbjct: 115 KGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYV 174
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ- 312
+L+ MY + K LFD MP+R++ +WN MISG E+A+++F ++++E
Sbjct: 175 RNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESG 234
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
++P++ T V LSAC +++G++I ++ P I + ++D+ +CG + A
Sbjct: 235 LMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGN--ALLDMYCKCGCLSIA 292
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV-----VKEIIALEPNNHGVYVVLSN 427
+ + M K +V+ W +++ N G +E A + +++++ +G YV +
Sbjct: 293 RAVFEEMPSK-NVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMING-YVQFNR 350
Query: 428 ------MYAEAESMKMQLEILLVQVLFAGLASAADILQ 459
++ E + K++ + +V L G A I Q
Sbjct: 351 FDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQ 388
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 7/257 (2%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
++ G+L A LF + +W +I D+A+ L+ M+ P++
Sbjct: 315 ANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVV 374
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L C+ ++ K IH + ++ + +D V L+ Y+ + A ++F +R +
Sbjct: 375 SLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVK 434
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
WT++I G A + + ++AL LF +M G P+ +T VLSAC+ G +E G K
Sbjct: 435 DTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFF 494
Query: 240 VFVKMRGFEMGAILG--TALVHMYTKNGALAKAKALFDSMPERNIAT----WNAMISGLA 293
++M +++ + LV + + G L +A+ L +P+ N A + +++S
Sbjct: 495 NSMRME-YQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACR 553
Query: 294 SHGHAEEALDLFRKLEK 310
+G+ E + ++L K
Sbjct: 554 IYGNVEMGERVAKQLVK 570
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 217/370 (58%), Gaps = 4/370 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +F S+ N N LI S + ++AI L+ ++ G P + TF +L C
Sbjct: 565 ARDVFYSMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDG 623
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC-YSVSSDLNNARQVFDEIRN-RTLNVWT 185
LN +QIH V K G +V + C Y S ++ +F E++ + L VWT
Sbjct: 624 AFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWT 683
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+ISGYAQ +AL + M + P+ T ASVL ACA L+ G++VH +
Sbjct: 684 ALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHT 743
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN-IATWNAMISGLASHGHAEEALDL 304
GF M I ++L+ MY K G + + +F MP RN + +WN+MI GLA +G+AEEAL++
Sbjct: 744 GFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEI 803
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F+++E++ I+P+++TF+GVLSAC HAG + GR++F M Y ++P+++H GCMVD+LG
Sbjct: 804 FKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILG 863
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R G + EAEE I ++ K D ++W LL AC+ HG+ +R +++ L+P + YV+
Sbjct: 864 RWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVL 923
Query: 425 LSNMYAEAES 434
LS +YAE+E+
Sbjct: 924 LSGLYAESEN 933
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 191/364 (52%), Gaps = 8/364 (2%)
Query: 55 AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPN 114
A+ AL G L+ A +LF I +PN WN +I A ++AI ++ +++TG
Sbjct: 252 AYVAL---GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ + VL A +++ LN +H K GLD +++V + LV Y+ S ++ A+QVF+
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
+ R + +W M+ G+AQ+ A E + F M G +P+ T S+ SACA L+
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDF 428
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G ++H + F + ALV MY K+GAL +A+ F+ M + +WNA+I G
Sbjct: 429 GGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQ 488
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
+ +EA +FR++ ++P++++ ++SAC + G+Q + +V G++
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKV-GLDTSTC 547
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--I 412
++D+ +CG VL A ++ M ++ +VV AL+A ++E A + +EI +
Sbjct: 548 AGSSLIDMYVKCGVVLAARDVFYSMPYR-NVVSINALIAG-YTMSHLEEAIHLFQEIQMV 605
Query: 413 ALEP 416
L+P
Sbjct: 606 GLKP 609
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 189/411 (45%), Gaps = 14/411 (3%)
Query: 9 RQPPLPIP-PLSLLADKCKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
R P P + + C S+H L Q+H MI + + F A+ L+ A SG
Sbjct: 403 RHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYA--KSGA 460
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L A + F ++ ++ WN +I D+A F++ M G P++ + ++ A
Sbjct: 461 LKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSA 520
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+NV+ +Q H + K GLD + L+ Y + AR VF + R +
Sbjct: 521 CANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSI 580
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+I+GY S EA+ LF ++ M G +P VT A +L C + L LG ++H V
Sbjct: 581 NALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMK 639
Query: 245 RGF-EMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEAL 302
GF ++ +L+ MY + A ++ LF + + + W A+ISG A H E+AL
Sbjct: 640 WGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKAL 699
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC--MV 360
++ + + I+P+ TF VL AC + G+++ ++ ++ C ++
Sbjct: 700 QFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVH---SLIFHTGFNMDEITCSSLI 756
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
D+ +CG V + ++ M + V+ W +++ +G E A + K++
Sbjct: 757 DMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQM 807
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 147/329 (44%), Gaps = 37/329 (11%)
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+L A +F+ + + W TLI P +A+ ++ M+R G P+Q V+
Sbjct: 192 NLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVIN 251
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
A Y L +AR++F +I N +
Sbjct: 252 A-----------------------------------YVALGRLADARKLFTQIPNPNVVA 276
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MISG+A+ A EA+ F ++ G + +L SVLSA A L G VH
Sbjct: 277 WNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAI 336
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
G + +G+ALV+MY K + AK +F+S+ ERNI WNAM+ G A +G A+E ++
Sbjct: 337 KEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVME 396
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
F +++ P++ TF + SAC ++D G Q+ M + + +VD+
Sbjct: 397 FFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIK-NKFTSNLFVANALVDMY 455
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G + EA + + M D V W A++
Sbjct: 456 AKSGALKEARKQFEFMKIH-DNVSWNAII 483
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 21/325 (6%)
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+++L+ K IH+ K G+ L + N +V Y +++ A++ F + + + W ++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
+S Y + F M G PN T A VLSAC+ + G++VH V GF
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGF 173
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ L+ MY K L A+ +FD + +W +I+G G EA+ +F K
Sbjct: 174 GFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDK 233
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+++ VP+ I V V++A G + R++F + P + + M+ + G
Sbjct: 234 MQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIP-----NPNVVAWNVMISGHAKRG 288
Query: 368 KVLEAEEL---IKRMVWKPDVVMWGALLAACK-----NHGNIEVAERVVKEIIALEPNNH 419
EA +K+ K G++L+A N+G++ V + +KE L+ N
Sbjct: 289 FAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSM-VHAQAIKE--GLDDN-- 343
Query: 420 GVYV--VLSNMYAEAESMKMQLEIL 442
VYV L NMYA+ M ++
Sbjct: 344 -VYVGSALVNMYAKCSKMDAAKQVF 367
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 223/399 (55%), Gaps = 37/399 (9%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIH +I+ + + + F + L A G++ A LF+ + N WN +I A
Sbjct: 175 KQIHGSIIVRNFLGNVFIWNALTDMYA--KCGEIEQARWLFDCLTKKNLVSWNLMISGYA 232
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ P+K I L MR +G P+Q T + ++ A
Sbjct: 233 KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------------- 265
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
Y ++ AR+VF E + + + WT M+ GYA++ R +AL+LF++ML+E
Sbjct: 266 --------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEH 317
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+S TL+SV+S+CA+ L G+ VH + G ++ +AL+ MY+K G + A+
Sbjct: 318 IEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDAR 377
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
++F+ MP RN+ +WNAMI G A +GH ++AL+LF + +++ P+++TF+G+LSAC H
Sbjct: 378 SVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCN 437
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+I+ G++ F S+ +G+ P ++HY CMV+LLGR G++ +A LIK M PD ++W L
Sbjct: 438 WIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTL 497
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L+ C G+I AE + + L+P Y++LSNMYA
Sbjct: 498 LSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYA 536
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 181/386 (46%), Gaps = 45/386 (11%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+D F+ + LL+ A + SG + F+ + + +NT I + + P +++ L+
Sbjct: 87 RDXFSWNALLS--AYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M+R GF P ++T +L A + + L KQIH + ++ + N L Y+
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ AR +FD + + L W MISGYA++ + + + L QM + G P+ VT++++++
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
A Y + G + +A+ +F E++I
Sbjct: 265 A-----------------------------------YCQCGRVDEARRVFSEFKEKDIVC 289
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
W AM+ G A +G E+AL LF ++ E I P+ T V+S+C + G+ + G
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK-S 348
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN---- 400
+ G+ + ++D+ +CG + +A + M + +VV W A++ C +G+
Sbjct: 349 ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGCAQNGHDKDA 407
Query: 401 IEVAERVVKEIIALEPNNHGVYVVLS 426
+E+ E ++++ +P+N +LS
Sbjct: 408 LELFENMLQQ--KFKPDNVTFIGILS 431
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 9/290 (3%)
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
L D N L+ Y+ S + N + FD + R + T I+G++ + E+L LF
Sbjct: 85 LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EGFEP T+ S+L+A AQ L G+++H + +R F + AL MY K G
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ +A+ LFD + ++N+ +WN MISG A +G E+ + L ++ +P+ +T +++
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW---K 382
A C G +D R++F K E I + M+ + G+ +A L M+ +
Sbjct: 265 AYCQCGRVDEARRVFSEFK-----EKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319
Query: 383 PDVVMWGALLAACKNHGNIEVAERVV-KEIIALEPNNHGVYVVLSNMYAE 431
PD +++++C ++ + V K I+A NN V L +MY++
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 47/230 (20%)
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
+ Q+++E N + A L + + H+F F L L+H+Y K
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEH---------HLFQPTDSF-----LHNQLLHLYAK 70
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGH-------------------------- 297
G L A+ LFD M +R+ +WNA++S A G
Sbjct: 71 FGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGF 130
Query: 298 -----AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
+E+L+LF+++++E P + T V +L+A + G+QI GS+ V
Sbjct: 131 SGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSII-VRNFLGN 189
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ + + D+ +CG++ +A L + K ++V W +++ +G E
Sbjct: 190 VFIWNALTDMYAKCGEIEQARWLFDCLT-KKNLVSWNLMISGYAKNGQPE 238
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 193/286 (67%)
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D+ N ++ Y+V+ +++ AR+VF+ + +R W++M+S Y + R+ +AL L+ +M
Sbjct: 136 DMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMR 195
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
P+ T+ SVLSAC+ G L +G +VH FV+ G E+ LGTAL+ MY K G +
Sbjct: 196 AACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIE 255
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
+ +F SMP +++ TW++MI GLA+HG +AL LF ++ E + PN++TF+GVL +C
Sbjct: 256 NSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCT 315
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H G + G++ F SM V+G+ PK++HYGCMVDLLGR G + EA++LI+ M ++PD V+W
Sbjct: 316 HLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIW 375
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
ALL AC+ + N+EVAE + ++ L+P+ G YV+LSN+YA+A S
Sbjct: 376 RALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANS 421
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 125/255 (49%), Gaps = 9/255 (3%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
+G++ A +FN + + F W++++ A A+ L+ MR P+ T V
Sbjct: 150 NGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSV 209
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L ACS++ +L ++H V +G++LD+ + L+ Y+ D+ N+ +VF + + +
Sbjct: 210 LSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDV 269
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W++MI G A ++AL LF +ML EG +PN VT VL +C G + G+K F
Sbjct: 270 LTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKK--YF 327
Query: 242 VKM---RGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGH 297
M G +V + ++G + +AK L MP E + W A++ + +
Sbjct: 328 SSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKN 387
Query: 298 ---AEEALDLFRKLE 309
AEEA+ R L+
Sbjct: 388 VEVAEEAMAKLRVLD 402
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 16/242 (6%)
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
L V T ++ YA++ RA+ A FD+ +V LA+ ++ E+ E V
Sbjct: 75 LFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRG------EVAEARRV 128
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
F MR +M + ++H Y NG + A+ +F+ M +R+ +W++M+S +++
Sbjct: 129 FDGMRERDM--VSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKD 186
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL+L+R++ + P+ T V VLSAC G + VG ++ ++ G+E ++ ++
Sbjct: 187 ALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVES-NGVELDVKLGTALI 245
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG----NIEVAERVVKEIIALEP 416
D+ +CG + + + M K DV+ W +++ NHG + + R++ E L+P
Sbjct: 246 DMYAKCGDIENSVRVFHSMPVK-DVLTWSSMIIGLANHGFGHDALSLFSRMLSE--GLQP 302
Query: 417 NN 418
N
Sbjct: 303 NE 304
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 228/428 (53%), Gaps = 14/428 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S GD++ A LF I P+ +N +I ++ + ++ L+ + +G + T
Sbjct: 255 SKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIV 314
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
++ S L+ IH KSG+ L+ V Y+ ++++ AR +FDE +
Sbjct: 315 GLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEK 374
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
T+ W MISGY Q+ A+ LF +M+ F PN+VT+ ++LSACAQ G L G+ VH
Sbjct: 375 TVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH 434
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+K E + TALV MY K G +++A LFDSM E+N TWN MI G HG+
Sbjct: 435 HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGH 494
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL L+ ++ P+ +TF+ VL AC HAG + G +IF +M Y IEP IEHY CM
Sbjct: 495 EALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACM 554
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VD+LGR G++ +A E IK+M +P +WG LL AC H + ++A + + L+P +
Sbjct: 555 VDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSV 614
Query: 420 GVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNLTPNRSTPF 478
G YV+LSN+Y+ V+ F AS +++ +SP L TP
Sbjct: 615 GYYVLLSNIYS-------------VERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPH 661
Query: 479 VLLNGNNT 486
V ++G+ +
Sbjct: 662 VFVSGDRS 669
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 188/407 (46%), Gaps = 7/407 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMW 83
C + L +HA II + F S L+ +C S + YA ++F+ + + +W
Sbjct: 121 CSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSR---VVYARKVFDGMPERDTVLW 177
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NT+I + D +I L+ M G + T T VL A + ++ L I K
Sbjct: 178 NTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALK 237
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
G +V+ L+ YS D+N AR +F I L + MISG+ + ++ L
Sbjct: 238 IGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKL 297
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F ++L G +S T+ ++ + G L L +H F G + + TA +Y K
Sbjct: 298 FRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNK 357
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
+ A+ LFD PE+ + WNAMISG +G E A+ LF+++ K + PN +T +
Sbjct: 358 LNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTI 417
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC G + G+ + +K +EP I +VD+ +CG + EA +L M K
Sbjct: 418 LSACAQLGSLSFGKWVHHLIKS-ENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK- 475
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ V W ++ HG A ++ E++ L N V LS +YA
Sbjct: 476 NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAV-TFLSVLYA 521
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 207/452 (45%), Gaps = 52/452 (11%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L +K + L Q HAQ I++ D ++L L +A LF S+ P+
Sbjct: 18 LINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQ--KLFDFSATRHARALFFSVPKPDI 75
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F++N L+R + + +P +I LY ++RR T +P+ T+ F + ACSN + L +H
Sbjct: 76 FLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHA 132
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
H G ++ V + LV Y S + AR+VFD + R +W TMI+G ++ ++
Sbjct: 133 HSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDD 192
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
++ LF +M+ +G +S T+ +VL A A+ L++G + GF + T L+
Sbjct: 193 SIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLIS 252
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
+Y+K G + A+ LF + ++ +NAMISG ++G E ++ LFR+L + T
Sbjct: 253 LYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSST 312
Query: 320 FVGVLS----------ACCHAGF-------------------------IDVGRQIFGSMK 344
VG++ AC GF ID+ R +F
Sbjct: 313 IVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP 372
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNI 401
E + + M+ + G A L K M+ + P+ V +L+AC G++
Sbjct: 373 -----EKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSL 427
Query: 402 EVAERVVKEIIA--LEPNNHGVYVVLSNMYAE 431
+ V I + LEPN + V L +MYA+
Sbjct: 428 SFGKWVHHLIKSENLEPNIY-VSTALVDMYAK 458
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 219/387 (56%), Gaps = 6/387 (1%)
Query: 60 SSSGDLSYATRLFNSIQSP----NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
+S G A +LF S+Q N +WNT+ S N A+ L MR T +
Sbjct: 259 ASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMR-TSIHLDA 317
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
L ACS++ ++ K+IH H ++ D+ +V N L+ YS DL +A +F
Sbjct: 318 IAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHR 377
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ L W M+SGYA R E LF +ML EG EPN VT+ASVL CA+ L+ G
Sbjct: 378 TEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHG 437
Query: 236 EKVHVFV-KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
++ H ++ K + FE +L ALV MY+++G + +A+ +FDS+ +R+ T+ +MI G
Sbjct: 438 KEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGM 497
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
G E L LF ++ K +I P+ +T V VL+AC H+G + G+ +F M V+GI P++E
Sbjct: 498 KGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLE 557
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HY CM DL GR G + +A+E I M +KP MW LL AC+ HGN E+ E +++ +
Sbjct: 558 HYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEM 617
Query: 415 EPNNHGVYVVLSNMYAEAESMKMQLEI 441
+P++ G YV+++NMYA A S + E+
Sbjct: 618 KPDHSGYYVLIANMYAAAGSWRKLAEV 644
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 202/450 (44%), Gaps = 41/450 (9%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA-LSSSGDLSYATRLF 72
PI L L KS+ Q KQ+HAQ+I Q+ SRL+ F ++ D + T
Sbjct: 83 PIGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESS 142
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
N++ P H WN LI A + +A+ +Y NM P+++T+ VLKAC N
Sbjct: 143 NTLD-PLH--WNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFN 199
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
++H + S ++ L V N LV Y L AR +FD + R W T+IS YA
Sbjct: 200 SGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYA 259
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASV------------------------------ 222
EA LF M EG E N + ++
Sbjct: 260 SRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIA 319
Query: 223 ----LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
L+AC+ G ++LG+++H F++ + AL+ MY++ L A LF
Sbjct: 320 MVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTE 379
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
E+ + TWNAM+SG A EE LFR++ +E + PN +T VL C + G++
Sbjct: 380 EKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKE 439
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
+ + E + + +VD+ R G+VLEA ++ + K D V + +++
Sbjct: 440 FHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLT-KRDEVTYTSMILGYGMK 498
Query: 399 GNIEVAERVVKEIIALE--PNNHGVYVVLS 426
G E ++ +E+ LE P++ + VL+
Sbjct: 499 GEGETTLKLFEEMCKLEIKPDHVTMVAVLT 528
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 40/339 (11%)
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
H +L AC++ +SL+ KQ+H V GLD + +V+ LV Y+ + L +A+ V +
Sbjct: 82 HPIGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTES 141
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
W +IS Y ++ EAL ++ ML + EP+ T SVL AC +S G
Sbjct: 142 SNTLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSG 201
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+VH ++ E + ALV MY + G L A+ LFD+MP R+ +WN +IS AS
Sbjct: 202 LEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASR 261
Query: 296 GHAEEALDLFRKLEKEQIVPNDI-------------TFVGV------------------- 323
G +EA LF +++E + N I F G
Sbjct: 262 GIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMV 321
Query: 324 --LSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
L+AC H G I +G++I G +++ + + +++ ++ + RC + A L R
Sbjct: 322 VGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKN--ALITMYSRCRDLGHAFILFHRTE 379
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
K ++ W A+L+ + E + +E++ +EPN
Sbjct: 380 EK-GLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPN 417
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 235/434 (54%), Gaps = 18/434 (4%)
Query: 15 IPPLSLLADKCKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCAL-SSSGDLSYATR 70
+ LS + C S+ LK Q HA +I + F AS A C+L S G L A +
Sbjct: 168 VYTLSAVLHACSSLQSLKLGDQFHAYII---KYHVDFDASVGSALCSLYSKCGRLEDALK 224
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
F+ I+ N W + + A A + P K + L++ M PN+ T T L C + S
Sbjct: 225 TFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILS 284
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
L Q+++ K G + +L V N L+ Y S + A ++F+ + + ++ W MI+G
Sbjct: 285 LELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAG 344
Query: 191 YAQSF-----------RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+AQ R +EAL LF ++ + G +P+ TL+SVLS C++ +E GE++H
Sbjct: 345 HAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIH 404
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
GF I+ T+L+ MY+K G++ +A F M R + W +MI+G + HG ++
Sbjct: 405 AQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQ 464
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+AL +F + + PN +TFVGVLSAC HAG + F M++ Y I+P ++HY CM
Sbjct: 465 QALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECM 524
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VD+ R G++ +A IK+M ++P +W +A CK+HGN+E+ +++++L+P +
Sbjct: 525 VDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDP 584
Query: 420 GVYVVLSNMYAEAE 433
YV+L NMY AE
Sbjct: 585 ETYVLLLNMYLSAE 598
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 195/416 (46%), Gaps = 18/416 (4%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
+P L D +S + + +H ++ + + F S L+ A G++ A R+F++
Sbjct: 71 VPLLQQCLDT-RSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYA--KCGNMEDARRVFDN 127
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ N W TL+ + P AI ++ M G P+ +T + VL ACS+++SL
Sbjct: 128 MLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG 187
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
Q H ++ K +D D V + L YS L +A + F IR + + WT+ +S A +
Sbjct: 188 DQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADN 247
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
+ L LF +M+ +PN TL S LS C + LELG +V+ G+E +
Sbjct: 248 GAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVR 307
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG-----------LASHGHAEEALD 303
+L+++Y K+G + +A LF+ M + ++ TWNAMI+G L++ EAL
Sbjct: 308 NSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALK 367
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF KL + P+ T VLS C I+ G QI + G + ++ +
Sbjct: 368 LFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT-GFLSDVIVSTSLISMY 426
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE--IIALEPN 417
+CG + A + M + ++ W +++ HG + A + ++ + + PN
Sbjct: 427 SKCGSIERASKAFLEMSTRT-MIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPN 481
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
+L C + + VH V G + + LV++Y K G + A+ +FD+M RN
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+ W ++ G + + A+ +F+++ P+ T VL AC + +G Q
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
+ + Y ++ + L +CG++ +A + R + + +V+ W + ++AC ++G
Sbjct: 193 YIIK-YHVDFDASVGSALCSLYSKCGRLEDALKTFSR-IREKNVISWTSAVSACADNGAP 250
Query: 402 EVAERVVKEIIA--LEPNNHGVYVVLSN 427
R+ E+IA ++PN + LS
Sbjct: 251 VKGLRLFVEMIAVDIKPNEFTLTSALSQ 278
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 211/368 (57%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F ++ + WN +I A + K + L+++M R+ P+ T+ V+
Sbjct: 389 GALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVV 448
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC+ ++LN +IH + KSG+ LD V + LV Y L A ++ + +T
Sbjct: 449 KACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTV 508
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W ++ISG++ ++ A F QML G P++ T A+VL CA +ELG+++H +
Sbjct: 509 SWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQI 568
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
+ + LV MY+K G + ++ +F+ P+R+ TW+AMI A HG E+A+
Sbjct: 569 LKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAI 628
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+LF +++ + PN F+ VL AC H G++D G F M YG++P++EHY CMVDL
Sbjct: 629 NLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDL 688
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
LGR G+V EA +LI+ M ++ D V+W LL+ CK GN+EVAE+ ++ L+P + Y
Sbjct: 689 LGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAY 748
Query: 423 VVLSNMYA 430
V+L+N+YA
Sbjct: 749 VLLANVYA 756
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 198/422 (46%), Gaps = 34/422 (8%)
Query: 12 PLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSS------ 62
P S + KC ++ L KQ+H QMI++ + + A+ LL F SS
Sbjct: 3 PTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFK 62
Query: 63 -----------------------GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKA 99
G++ +A LF+S+ + WN+L+ + K+
Sbjct: 63 VFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKS 122
Query: 100 IFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRC 159
I +++ MR + TF +LKACS + Q+H + G + D+ + LV
Sbjct: 123 IEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDM 182
Query: 160 YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
YS L++A +VF E+ R L W+ +I+GY Q+ R E L LF ML G + T
Sbjct: 183 YSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTY 242
Query: 220 ASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE 279
ASV +CA +LG ++H F +I+GTA + MY K + A +F+++P
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPN 302
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
++NA+I G A +ALD+F+ L++ + ++I+ G L+AC G Q+
Sbjct: 303 PPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQL 362
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
G + G+ I ++D+ G+CG ++EA + + M + D V W A++AA + +
Sbjct: 363 HGLAVKC-GLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAVSWNAIIAAHEQNE 420
Query: 400 NI 401
I
Sbjct: 421 EI 422
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 181/358 (50%), Gaps = 5/358 (1%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++FN++ +P +N +I A KA+ ++ +++R ++ + + L ACS
Sbjct: 293 AWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSV 352
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
++ Q+H K GL ++ V N ++ Y L A +F+E+ R W +
Sbjct: 353 IKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAI 412
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I+ + Q+ + L LF ML EP+ T SV+ ACA L G ++H + G
Sbjct: 413 IAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGM 472
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ +G+ALV MY K G L +A+ + + E+ +WN++ISG +S +E A F +
Sbjct: 473 GLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQ 532
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ + I+P++ T+ VL C + I++G+QI + ++ + + +VD+ +CG
Sbjct: 533 MLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKL-QLHSDVYIASTLVDMYSKCG 591
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE--IIALEPNNHGVYV 423
+ ++ + ++ K D V W A++ A HG E A + +E ++ ++P NH +++
Sbjct: 592 NMQDSRLMFEKAP-KRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKP-NHTIFI 647
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
+T + +L C+ L G++VH + + GF + L+ Y K+ + A +F
Sbjct: 5 KKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVF 64
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
D MP+R++ +WN +I G A G+ A LF + + +V ++ +LS H G
Sbjct: 65 DRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVV----SWNSLLSCYLHNGVNR 120
Query: 335 VGRQIFGSMKRVYGIEPKIEH-YGCMVDLLGRCGKV------LEAEELIKRMVWKPDVVM 387
+IF M+ + KI H Y +L C + L+ L +M ++ DVV
Sbjct: 121 KSIEIFVRMRSL-----KIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVT 175
Query: 388 WGALLAACKNHGNIEVAERVVKEI 411
AL+ ++ A RV +E+
Sbjct: 176 GSALVDMYSKCKKLDDAFRVFREM 199
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 23 DKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
D C +M + KQIHAQ++ D + AS L+ S G++ + +F +
Sbjct: 550 DVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDM--YSKCGNMQDSRLMFEKAPKRD 607
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+ W+ +I A A +KAI L+ M+ PN F VL+AC+++
Sbjct: 608 YVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHM----------- 656
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+D LH ++ Y + + + ++ M+ +S + NE
Sbjct: 657 ----GYVDKGLHYFQKMLSHYGLDPQMEH---------------YSCMVDLLGRSGQVNE 697
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
AL L + M FE + V ++LS C G +E+ EK
Sbjct: 698 ALKLIESM---PFEADDVIWRTLLSNCKMQGNVEVAEK 732
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 235/461 (50%), Gaps = 38/461 (8%)
Query: 8 LRQPPLPIPPL-SLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
L + P P P L S L C +L K++HA S+ I ++RL+ A G
Sbjct: 55 LHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYA--KCG 112
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFV- 121
L A LF+ I + WNT+I A+ ++A L+ M R F+ N +V
Sbjct: 113 SLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVS 172
Query: 122 ----------LKACSNVRSLNC--------------------CKQIHTHVSKSGLDLDLH 151
+ S NC K+IH ++ +SGL+LD
Sbjct: 173 QGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEV 232
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V L+ Y LN AR +FD++ ++ + WTTMI + R E LF ++ G
Sbjct: 233 VWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSG 292
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN T A VL+ACA ++G++VH ++ G++ + +ALVH+Y+K G A+
Sbjct: 293 VRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETAR 352
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ MP ++ +W ++I G A +G + AL F L + P++ITFVGVLSAC HAG
Sbjct: 353 RVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAG 412
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D+G + F S+K +G+ +HY C++DLL R G+ EAE +I M KPD +W +L
Sbjct: 413 LVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASL 472
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L C+ HGNIE+AER K + LEP N Y+ LSN+YA A
Sbjct: 473 LGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANA 513
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 151/327 (46%), Gaps = 48/327 (14%)
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQM--LMEGF-------EPNSVTLASVLSACA 227
+N LN T +S +++ R E + LF Q L E +P+ +++++AC
Sbjct: 15 KNLNLNPKDTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACL 74
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
+ LELG++VH K F G ++ L+HMY K G+L A+ LFD +P++++ +WN
Sbjct: 75 RHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNT 134
Query: 288 MISGLASHGHAE-------------------------------EALDLFRKL-EKEQIVP 315
MISG A+ G E EALDLFR + E E
Sbjct: 135 MISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNC 194
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
N T L+A + G++I G + R G+E + ++DL G+CG + EA +
Sbjct: 195 NMFTLSSALAAAAAISSLRRGKEIHGYLIRS-GLELDEVVWTALLDLYGKCGSLNEARGI 253
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLSNMYAE-- 431
+M K D+V W ++ C G + + ++++ + PN + VL N A+
Sbjct: 254 FDQMADK-DIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVL-NACADLA 311
Query: 432 AESMKMQLEILLVQVLFAGLASAADIL 458
AE M ++ + +V + + AA L
Sbjct: 312 AEQMGKEVHGYMTRVGYDPFSFAASAL 338
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 235/446 (52%), Gaps = 12/446 (2%)
Query: 1 MSLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS 60
M ++CSS+R P + C + +Q+HA ++ D F + LL A
Sbjct: 136 MKMRCSSVR----PDNFTYAIIIPCCDLGFGQQVHADIVKVCSDLDAFIGTNLLRMYA-- 189
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
G++ A ++F+ + S WN +I + DK+I L+ + R G + +++T+
Sbjct: 190 EVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAI 249
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VL + + Q+H+ + + G D N LV YS + +A ++F+EI ++
Sbjct: 250 VLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQD 309
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ WT +I G+ QS EA+ LF QM + EPNS T +L ACA + + G H
Sbjct: 310 VVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHG 369
Query: 241 FVKMRGFEMGA--ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
V G +GA ++G+A+V MY+K G + A F MPER+IA+WN +I G A +G
Sbjct: 370 LVLKFGL-LGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAG 428
Query: 299 EEALDLFRK---LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
+AL L+ + L I PN++TFVGVL AC H G + G F M + I+P EH
Sbjct: 429 MKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEH 488
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE 415
Y CMVDLLGR G + EAE LI + KPD VMWGALL ACK HG++++ R + + E
Sbjct: 489 YTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNE 548
Query: 416 PNNHGVYVVLSNMYAEAESMKMQLEI 441
P N YV+L+N Y + +EI
Sbjct: 549 PRNSSNYVLLANSYTDIGEWGEAVEI 574
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 175/355 (49%), Gaps = 5/355 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G +S A +LF+ + WN ++ + + + +M MR + P+ T+ ++
Sbjct: 95 GLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIII 154
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
C L +Q+H + K DLD + L+R Y+ ++ +AR+VFD + +R L
Sbjct: 155 PCCD----LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLV 210
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W MIS Y++ R ++++ LF Q+ EG + T A VL+ A + +VH +
Sbjct: 211 TWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLI 270
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
RGF ALV++Y+K G +A A LF+ +P++++ +W +I G GH EEA+
Sbjct: 271 IERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAM 330
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
LF +++ I PN TF G+L AC A GR G + + + + +VD+
Sbjct: 331 WLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDM 390
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
+CG++ +A + M + D+ W ++ +G A ++ E++ L P+
Sbjct: 391 YSKCGEMGDALRAFQEMP-ERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPS 444
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 159/332 (47%), Gaps = 30/332 (9%)
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL-NCCKQIHTHVSKSGLDLDLHVVNCL 156
KA L+ ++ + G + + +L+A N ++L + K +H S + N +
Sbjct: 33 KAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSY-----NTI 87
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
+ Y ++ A ++FD R + W ++SG ++ + E L F +M P++
Sbjct: 88 LSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDN 147
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
T A ++ C L G++VH + ++ A +GT L+ MY + G + A+ +FD
Sbjct: 148 FTYAIIIPCCD----LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDG 203
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
MP R + TWNAMIS + +G ++++ LFR+L +E I ++ T+ VL+
Sbjct: 204 MPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNE------FAAR 257
Query: 337 RQIFGSMKRVYGIEPKIEHYGC--------MVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
Q+F +M+ V+ + IE C +V+L +CG V A L + + DVV W
Sbjct: 258 WQVFEAMQ-VHSL--IIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIP-DQDVVSW 313
Query: 389 GALLAACKNHGNIEVAERVVKEIIA--LEPNN 418
++ G++E A + ++ +EPN+
Sbjct: 314 TVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNS 345
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G +++A LFD +R+ +WN ++SG + E L F K+ + P++ T+
Sbjct: 91 YFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTY 150
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYG-IEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
++ CC GF G+Q+ + +V ++ I ++ + G++ +A ++ M
Sbjct: 151 -AIIIPCCDLGF---GQQVHADIVKVCSDLDAFIGTN--LLRMYAEVGEIGDARKVFDGM 204
Query: 380 VWKPDVVMWGALLAACKNHG----NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
+ +V W A+++ +G +I + ++ +E I+ + + +VL+ A +
Sbjct: 205 PSR-GLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYA--IVLNEFAARWQVF 261
Query: 436 K-MQLEILLVQVLF 448
+ MQ+ L+++ F
Sbjct: 262 EAMQVHSLIIERGF 275
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 221/403 (54%), Gaps = 35/403 (8%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRA-QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
G + A LF ++ WN +I + LN F + + AP++ T T V
Sbjct: 242 GRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSV 301
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS----------------- 164
L AC+N+ ++ KQ+H ++ +S + V N L+ Y+ S
Sbjct: 302 LSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADL 361
Query: 165 ----------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D+ +AR++FD + NR + WT MI GY Q+ +EA+ LF M+
Sbjct: 362 NVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMI 421
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G EPNS T+A+VLS CA CLE G+++H E + + ++V MY ++G+L
Sbjct: 422 RSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLP 481
Query: 269 KAKALFDSMPERN-IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +FD + R TW +MI LA HG E+A+ LF ++ + + P+ ITFVGVLSAC
Sbjct: 482 WARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSAC 541
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H GF+D G++ F ++ +GI P++ HY CMVDLL R G EA+E I++M +PD +
Sbjct: 542 THVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIA 601
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
WG+LL+AC+ H N ++AE +++++++P N G Y LSN+Y+
Sbjct: 602 WGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYS 644
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 185/434 (42%), Gaps = 68/434 (15%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ SG L+ A +F + + W ++ +AI ++++M G +P Q T T
Sbjct: 107 AKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLT 166
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
VL +C+ + +++H+ V K GL + V N ++ Y D AR VF+ + R
Sbjct: 167 NVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPER 226
Query: 180 TLNVWTTMIS-------------------------------GYAQSFRANEALMLFDQML 208
+++ W M+S GY Q+ +AL F +ML
Sbjct: 227 SVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRML 286
Query: 209 -MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV------------------------- 242
P+ T+ SVLSACA G + +G++VH ++
Sbjct: 287 SYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSV 346
Query: 243 -KMRGFEMGAILG-------TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
RG A++ TAL+ Y K G + A+ +FD M R++ W AMI G
Sbjct: 347 ENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQ 406
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
+GH +EA++LFR + + PN T VLS C ++ G+QI R E
Sbjct: 407 NGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQ-EQSSS 465
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--I 412
+V + R G + A + R+ W+ + V W +++ A HG E A + +E+ +
Sbjct: 466 VSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRV 525
Query: 413 ALEPNNHGVYVVLS 426
++P+ VLS
Sbjct: 526 GVKPDRITFVGVLS 539
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 148/339 (43%), Gaps = 67/339 (19%)
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L+ Y+ S L +AR VF E+ R WT M+ G + R EA+ +F M+ +G
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P TL +VLS+CA + +G KVH FV G + ++++MY K G A+A+
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV------------------- 314
F+ MPER++++WNAM+S A G + AL LF + IV
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKAL 279
Query: 315 -------------PNDITFVGVLSACCHAGFIDVGRQIFGSMKR---------------V 346
P++ T VLSAC + G + +G+Q+ + R +
Sbjct: 280 WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISM 339
Query: 347 YGIEPKIE------HYGCMVDL-----------LGRCGKVLEAEELIKRMVWKPDVVMWG 389
Y +E M DL + G + A E+ M DVV W
Sbjct: 340 YAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMS-NRDVVAWT 398
Query: 390 ALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
A++ + +G+ + A + + +I EPN++ V VLS
Sbjct: 399 AMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLS 437
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
E +F ++ + +L+ +Y K+G LA A+A+F MPER+ +W M+ GL
Sbjct: 81 EARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRV 140
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G EA+ +F + + + P T VLS+C VGR++ + ++ G+ +
Sbjct: 141 GRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKL-GLSSCVPV 199
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
++++ G+CG A + +RM + V W A+++ + G +++A
Sbjct: 200 ANSVLNMYGKCGDAETARAVFERMP-ERSVSSWNAMVSLDAHLGRMDLA 247
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 223/399 (55%), Gaps = 37/399 (9%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIH +I+ + + + F + L A G++ A LF+ + N WN +I A
Sbjct: 175 KQIHGSIIVRNFLGNVFIWNALTDMYA--KCGEIEQARWLFDCLTKKNLVSWNLMISGYA 232
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ P+K I L MR +G P+Q T + ++ A
Sbjct: 233 KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA--------------------------- 265
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
Y ++ AR+VF E + + + WT M+ GYA++ R +AL+LF++ML+E
Sbjct: 266 --------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEH 317
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+S TL+SV+S+CA+ L G+ VH + G ++ +AL+ MY+K G + A+
Sbjct: 318 IEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDAR 377
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
++F+ MP RN+ +WNAMI G A +GH ++AL+LF + +++ P+++TF+G+LSAC H
Sbjct: 378 SVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCN 437
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+I+ G++ F S+ +G+ P ++HY CMV+LLGR G++ +A LIK M PD ++W L
Sbjct: 438 WIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTL 497
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L+ C G+I AE + + L+P Y++LSNMYA
Sbjct: 498 LSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYA 536
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 181/386 (46%), Gaps = 45/386 (11%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+D F+ + LL+ A + SG + F+ + + +NT I + + P +++ L+
Sbjct: 87 RDIFSWNALLS--AYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M+R GF P ++T +L A + + L KQIH + ++ + N L Y+
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ AR +FD + + L W MISGYA++ + + + L QM + G P+ VT++++++
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
A Y + G + +A+ +F E++I
Sbjct: 265 A-----------------------------------YCQCGRVDEARRVFSEFKEKDIVC 289
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
W AM+ G A +G E+AL LF ++ E I P+ T V+S+C + G+ + G
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK-S 348
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN---- 400
+ G+ + ++D+ +CG + +A + M + +VV W A++ C +G+
Sbjct: 349 ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGCAQNGHDKDA 407
Query: 401 IEVAERVVKEIIALEPNNHGVYVVLS 426
+E+ E ++++ +P+N +LS
Sbjct: 408 LELFENMLQQ--KFKPDNVTFIGILS 431
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 9/290 (3%)
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
L D+ N L+ Y+ S + N + FD + R + T I+G++ + E+L LF
Sbjct: 85 LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EGFEP T+ S+L+A AQ L G+++H + +R F + AL MY K G
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ +A+ LFD + ++N+ +WN MISG A +G E+ + L ++ +P+ +T +++
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW---K 382
A C G +D R++F K E I + M+ + G+ +A L M+ +
Sbjct: 265 AYCQCGRVDEARRVFSEFK-----EKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319
Query: 383 PDVVMWGALLAACKNHGNIEVAERVV-KEIIALEPNNHGVYVVLSNMYAE 431
PD +++++C ++ + V K I+A NN V L +MY++
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSK 369
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 47/230 (20%)
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
+ Q+++E N + A L + + H+F F L L+H+Y K
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEH---------HLFQPTDSF-----LHNQLLHLYAK 70
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGH-------------------------- 297
G L A+ LFD M +R+I +WNA++S A G
Sbjct: 71 FGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGF 130
Query: 298 -----AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
+E+L+LF+++++E P + T V +L+A + G+QI GS+ V
Sbjct: 131 SGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSII-VRNFLGN 189
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ + + D+ +CG++ +A L + K ++V W +++ +G E
Sbjct: 190 VFIWNALTDMYAKCGEIEQARWLFDCLT-KKNLVSWNLMISGYAKNGQPE 238
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 223/377 (59%), Gaps = 8/377 (2%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A S G + A ++F+ + + WNT+I + +A+ +++ MR GF ++ T
Sbjct: 97 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFT 156
Query: 118 FTFVLKACSNVRSLNC----CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ VL AC +NC CK++H K+ +DL+L+V L+ Y+ + +A QVF
Sbjct: 157 ISSVLSACG----VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 212
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
+ +++++ W++M++GY Q+ EAL+L+ + E N TL+SV+ AC+ L
Sbjct: 213 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 272
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G+++H + GF + ++ V MY K G+L ++ +F + E+N+ WN +ISG A
Sbjct: 273 EGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 332
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
H +E + LF K++++ + PN++TF +LS C H G ++ GR+ F M+ YG+ P +
Sbjct: 333 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 392
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
HY CMVD+LGR G + EA ELIK + + P +WG+LLA+C+ + N+E+AE +++
Sbjct: 393 VHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE 452
Query: 414 LEPNNHGVYVVLSNMYA 430
LEP N G +V+LSN+YA
Sbjct: 453 LEPENAGNHVLLSNIYA 469
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 150/286 (52%), Gaps = 2/286 (0%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
N++ +L+ C+ ++ K H + + L+ D+ ++N L+ YS + ARQVF
Sbjct: 52 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 111
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
D + R+L W TMI Y ++ +EAL +F +M EGF+ + T++SVLSAC +
Sbjct: 112 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 171
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
+K+H ++ +GTAL+ +Y K G + A +F+SM +++ TW++M++G
Sbjct: 172 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 231
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+ + EEAL L+R+ ++ + N T V+ AC + + G+Q+ + + G +
Sbjct: 232 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-GFGSNV 290
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
VD+ +CG + E+ +I V + ++ +W +++ H
Sbjct: 291 FVASSAVDMYAKCGSLRES-YIIFSEVQEKNLELWNTIISGFAKHA 335
>gi|357132191|ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Brachypodium distachyon]
Length = 656
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 220/406 (54%), Gaps = 36/406 (8%)
Query: 62 SGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTF 120
+G + A +F I + W +I + +A+ Y+ M N
Sbjct: 223 AGAIDMAAEMFERIPERDVVSWLVMIDGYIRADCISEALRTYVAMMAEVDTRGNVALLVD 282
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL-------------- 166
KAC+ ++ +Q+HT + K G D L V L+ Y S DL
Sbjct: 283 FQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYG-SCDLLDLAKMQFKLSDKS 341
Query: 167 ------------------NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ ARQ+FD + + W+T++SGY QS ++ AL LF ML
Sbjct: 342 HIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLML 401
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G +PN +TLAS LSA A SG LE G +H ++ + + L L+ MY K G++A
Sbjct: 402 GAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTDNLIAGLIDMYAKCGSVA 461
Query: 269 KAKALFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
A LF+ + E+ +++ WNAMI LA HGHA +L+LF +L+ I PN IT++GVL+A
Sbjct: 462 DAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSNIKPNSITYIGVLNA 521
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
CCHAG + G+ F SM+R YGI P I+HYGCMVDLLGR G + EAE LIK M K DVV
Sbjct: 522 CCHAGMVTEGKHHFESMRREYGIPPTIKHYGCMVDLLGRAGYLEEAERLIKTMPVKSDVV 581
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG++LAA ++HGN+ + E+ +E+ L+PN+ V L N+YA+A
Sbjct: 582 IWGSILAAARSHGNVALGEKAAEELAKLDPNHGASKVALCNIYADA 627
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 191/443 (43%), Gaps = 73/443 (16%)
Query: 44 IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY 103
++D A + LLA AL+ G L +A R+ + + + T++ A A + + + A+ ++
Sbjct: 75 LRDAAAHNTLLA--ALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVF 132
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
M PN+ T V+ A + + +H + GLD + V LV Y+ +
Sbjct: 133 RGMLAQDVPPNEVTLAGVITALARDWAPAPLGMVHGVSVQRGLDGFVIVATNLVHAYAAA 192
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF- 212
+ + AR VF+ + ++ W M++GY ++ + A +F+++ +++G+
Sbjct: 193 AQVGFARAVFEWMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERIPERDVVSWLVMIDGYI 252
Query: 213 ---------------------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
N L ACA+ + G+++H + GF+
Sbjct: 253 RADCISEALRTYVAMMAEVDTRGNVALLVDFQKACARHAAVLEGQQLHTVILKDGFDTHL 312
Query: 252 ILGTALVHMY-------------------------------TKNGALAKAKALFDSMPER 280
+ L+H Y + + +A+ LFD+MPE+
Sbjct: 313 FVQATLIHFYGSCDLLDLAKMQFKLSDKSHIASWNAFMAGIVRKNLMHEARQLFDNMPEK 372
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
+ +W+ ++SG GH++ AL LF + + PN IT LSA ++G ++ GR I
Sbjct: 373 DTISWSTLLSGYVQSGHSDMALQLFCLMLGAGVKPNHITLASTLSAVANSGTLEQGRWIH 432
Query: 341 GSM--KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-PDVVMWGALLAACKN 397
+ K ++ + I ++D+ +CG V +A L + K + W A++ +
Sbjct: 433 DYIISKSIHLTDNLI---AGLIDMYAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAI 489
Query: 398 HGNIEVAERVVKEIIA--LEPNN 418
HG+ ++ + ++ + ++PN+
Sbjct: 490 HGHAHMSLELFSQLQSSNIKPNS 512
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 202/319 (63%), Gaps = 5/319 (1%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV--SSDLNNARQVFDEIRNR 179
A + V +H ++K G + + VVN ++ Y+ S DL AR+VFD + R
Sbjct: 205 FSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ER 263
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLM--EGFEPNSVTLASVLSACAQSGCLELGEK 237
+ W +MI+ YAQ+ + EA+ L+ +ML G + N+V L++VL ACA +G ++ G++
Sbjct: 264 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKR 323
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H V G E +GT++V MY+K G + A F + E+NI +W+AMI+G HG
Sbjct: 324 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 383
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EAL++F ++++ + PN ITF+ VL+AC HAG +D GR + +MK+ +GIE +EHYG
Sbjct: 384 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 443
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLLGR G + EA LIK M KPD +WGALL+AC+ H N+E+AE VK + L+ +
Sbjct: 444 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS 503
Query: 418 NHGVYVVLSNMYAEAESMK 436
N G YV+LSN+YAEA K
Sbjct: 504 NSGYYVLLSNIYAEARMWK 522
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 5/248 (2%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQ 115
A S DL A ++F++++ + WN++I A + +AI LY M G N
Sbjct: 244 AKGGSRDLEVARKVFDTMER-DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNA 302
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
+ VL AC++ ++ K+IH V + GL+ +++V +V YS + A + F +
Sbjct: 303 VALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRK 362
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
I+ + + W+ MI+GY R EAL +F +M G PN +T SVL+AC+ +G L+ G
Sbjct: 363 IKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG 422
Query: 236 EKVHVFVKMR-GFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLA 293
+ +K G E G +V + + G L +A +L M + + A W A++S
Sbjct: 423 RYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACR 482
Query: 294 SHGHAEEA 301
H + E A
Sbjct: 483 IHKNVELA 490
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 242/448 (54%), Gaps = 9/448 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
K ++HQ K +H +I S + F + LL GD+ A +F+ + + + W
Sbjct: 250 KLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDL--YFKCGDIRDAFSVFDELSTIDLVSW 307
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
+I A P +A+ L+ + R PN T + VL AC+ SLN + +H K
Sbjct: 308 TAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIK 367
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
G + D N LV Y+ + +AR VF+ + ++ + W ++ISGY Q+ A EAL L
Sbjct: 368 LGSE-DATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALEL 426
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI-LGTALVHMYT 262
FDQM + P+++TL SVLSACA G +G +H + G G++ +GTAL++ Y
Sbjct: 427 FDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYA 486
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G A+ +FD M E+N TW+AMI G G +L+LF + KE++ PN++ F
Sbjct: 487 KCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTT 546
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+LSAC H+G + G + F +M +VY P ++HY CMVDLL R G++ EA + I+++ +
Sbjct: 547 ILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQ 606
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE--SMKMQLE 440
PDV + GA L C+ H ++ E V+ ++ L P+ YV++SN+YA S Q+
Sbjct: 607 PDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVM 666
Query: 441 ILLVQVLFAGLA--SAADILQNPDFESP 466
L+ Q A L S DI + DF SP
Sbjct: 667 ELMKQRGLAKLPGWSLVDIETSNDF-SP 693
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 208/385 (54%), Gaps = 8/385 (2%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P SLL CK++ L++IHA +++ +D ++L++ S G + A +F+ I
Sbjct: 41 PCFSLLG-ICKTVSSLRKIHALLVVHGLSEDLLCETKLVSL--YGSFGHVECARLMFDRI 97
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLY-MNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
++P+ + W +IR + + + + Y +R+ + F+ VLKACS +R +
Sbjct: 98 RNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEG 157
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+++H + K G D V+ LV Y+ ++ ++R+VFDEI +R + WT+MI GY Q+
Sbjct: 158 RKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQN 216
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
E L+LF++M E N TL S+++AC + G L G+ VH +V GF++ + L
Sbjct: 217 DCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLV 276
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
T L+ +Y K G + A ++FD + ++ +W AMI G A G+ EAL LF + ++
Sbjct: 277 TPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLL 336
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN +T VLSAC G +++GR + ++ + E+ +VD+ +C + +A
Sbjct: 337 PNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFEN--ALVDMYAKCHMIGDARY 394
Query: 375 LIKRMVWKPDVVMWGALLAACKNHG 399
+ + V+ DV+ W ++++ +G
Sbjct: 395 VFE-TVFDKDVIAWNSIISGYTQNG 418
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 237/439 (53%), Gaps = 21/439 (4%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMI---------ISSRIQDHFAASRL 53
L +S Q I L L + +S+ Q Q+HA ++ +S + + ++ ++L
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 54 LAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP 113
F + ++F+ + W+++I A A + P A+ + M G P
Sbjct: 76 PLF-----------SLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRP 124
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ H + KAC +R + K +H K+G D+ V + LV Y+ ++ +AR +F
Sbjct: 125 DDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLF 184
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
DE+ R + W+ MI GYAQ EAL LF Q L+E + N T +SV+ C+ S LE
Sbjct: 185 DEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLE 244
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG+ +H F+ + +G+AL+ +Y+K G + A +FD +P RN+ WN+M+ A
Sbjct: 245 LGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACA 304
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
H H + LF ++ + PN I+F+ VL AC HAG ++ GR+ F S+ R YGIEP+
Sbjct: 305 QHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPET 363
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHY +VDLLGR GK+ EA +IK+M +P +WGALL C+ H + E+A V I+
Sbjct: 364 EHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILE 423
Query: 414 LEPNNHGVYVVLSNMYAEA 432
++ ++ G++V+LSN YA A
Sbjct: 424 MDSSSSGLHVLLSNAYAAA 442
>gi|115469756|ref|NP_001058477.1| Os06g0700100 [Oryza sativa Japonica Group]
gi|53791883|dbj|BAD54005.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113596517|dbj|BAF20391.1| Os06g0700100 [Oryza sativa Japonica Group]
gi|125598393|gb|EAZ38173.1| hypothetical protein OsJ_22527 [Oryza sativa Japonica Group]
gi|215767419|dbj|BAG99647.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 238/421 (56%), Gaps = 11/421 (2%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTF 118
++SG L+ A +LF+ I P+ +WNTL+ A A S P A+ M R G + P+ +
Sbjct: 52 AASGSLAAARKLFDEIPRPDVPLWNTLLSACARSGLPQHALVTASTMARAGSSRPDNVSV 111
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
T +L AC+ +RSL ++IH + ++ LDL ++N LV Y L NAR VFD I +
Sbjct: 112 TILLSACARLRSLVHGREIHGYAVRNLAALDLPLLNALVSMYGRCGRLVNARMVFDSIGS 171
Query: 179 -RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL-ELGE 236
+++ WT MI+ ++ + EAL +F+QM + G + + VTL +V+SAC C ELGE
Sbjct: 172 MKSVVSWTCMINACCENGKPAEALQVFEQMRLAGVKVDEVTLLAVISACTMLDCRSELGE 231
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
V + GF + AL+HM+ K G + ++ +FDS+ R + +W A+I LA HG
Sbjct: 232 WVEEYAHENGFLENTRVANALIHMHGKMGRVRRSCEIFDSITVRTVVSWTAIIQALAVHG 291
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
H AL F ++ ++ P+++ F+ V++AC H+G ++ RQ+F SM Y I P +EHY
Sbjct: 292 HGVAALVQFSQMLRQGFQPDELVFLSVINACSHSGLVNEARQLFKSMVEEYHITPWMEHY 351
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
G MVDLL + G + EA E + M +PD V+W L AC++ GN +A +VV +I +EP
Sbjct: 352 GSMVDLLCKSGMLEEAFEFVLAMPVRPDPVIWRVLTGACRDLGNAILARKVVDHVIEMEP 411
Query: 417 NNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADIL--------QNPDFESPPT 468
G YV+ SN+YA E + +++ + ++ + + L +N + PPT
Sbjct: 412 EYGGNYVLASNLYAANEDWRRVVDVRMEMGVWKETSRYSTALSYVEVNVEENAESLHPPT 471
Query: 469 N 469
N
Sbjct: 472 N 472
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 187/296 (63%), Gaps = 2/296 (0%)
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+ IH ++ K+ +D ++ V N L+ Y S +L AR++F I R + W T+IS YA
Sbjct: 422 RSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHC 480
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
EAL L+D+M++E +PNS TL SVLSAC+ LE GEKVH ++ FE +
Sbjct: 481 GHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIA 540
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
TAL+ MY K G L K++ +F+SM ER++ TWN MISG HG A A++ F+++E+
Sbjct: 541 TALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAK 600
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN +TF+ VLSAC HAG + G+ +FG M+ Y + P ++HY CMVDLLGR G + EAE
Sbjct: 601 PNGLTFLAVLSACAHAGLVKEGKYLFGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEA 659
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L+ M PD +WGALL++CK H IE+ R+ K I + N G YV++SNMY+
Sbjct: 660 LVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYS 715
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 211/502 (42%), Gaps = 84/502 (16%)
Query: 5 CSSLRQPPLPIPPL------------SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASR 52
CSSL Q L P LL+++ S+ L Q HA +I S + F AS+
Sbjct: 13 CSSLLQQRLYCSPTWSHEPNDFNYLNHLLSNQISSLKTLLQSHAFIITSGYSNNIFIASK 72
Query: 53 LLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
L++ A S S +T LF+ I + F+WN++I+A S+ +A+ Y MR +
Sbjct: 73 LISLYA--SFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEAL 130
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV-NCLVRCYSVSSDLNNARQ 171
PN T ++ +C+ + +N + IH VSK GL V + V YS L A
Sbjct: 131 PNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYG 190
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRAN---EALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
VFDEI R + WT ++ G Q+ + E L ++ +G PN TL AC
Sbjct: 191 VFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGN 250
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
G L G +H V G + ++ + L+ MY+K G +A F + ++I +W +M
Sbjct: 251 LGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSM 310
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDIT-------------------FVG------- 322
IS + G A E +D+F ++ I P+ I F G
Sbjct: 311 ISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHY 370
Query: 323 ---------VLSACCHAGFIDVGRQIFGS-----------MKRVYG-------------- 348
+LS C GF+ + + FG M YG
Sbjct: 371 TLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIHCYMIK 430
Query: 349 --IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
++ + ++D+ G+ G + A + R+ D+V W L+++ + G+ A
Sbjct: 431 NLMDENVSVNNSLIDMYGKSGNLTIARRIFCRI--PRDIVTWNTLISSYAHCGHFAEALS 488
Query: 407 VVKEIIA--LEPNNHGVYVVLS 426
+ +++ L+PN+ + VLS
Sbjct: 489 LYDKMVLEDLKPNSATLVSVLS 510
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 175/391 (44%), Gaps = 18/391 (4%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGF---APNQH 116
S G L A +F+ I + W L+ + + M R G PN
Sbjct: 180 SKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFR 239
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T +AC N+ +L + +H V K+G+D V + L+ YS + A + F E+
Sbjct: 240 TLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEV 299
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
N+ + WT+MIS Y++ A E + +F +ML+ G P+ + ++ +LS+ + S + +
Sbjct: 300 LNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAK 359
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL-ASH 295
H + R + + ++ AL+ MY K G L A+ F + E+N WN M+SG A+H
Sbjct: 360 AFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATH 419
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
+ + L E + N+ ++ +G + + R+IF + R I
Sbjct: 420 LARSIHCYMIKNLMDENVSVNN----SLIDMYGKSGNLTIARRIFCRIPR------DIVT 469
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ ++ CG EA L +MV KP+ ++L+AC + ++E E+V I
Sbjct: 470 WNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYIN 529
Query: 413 ALEPN-NHGVYVVLSNMYAEAESMKMQLEIL 442
+ N + L +MYA+ ++ EI
Sbjct: 530 GGKFEFNLSIATALIDMYAKCGQLEKSREIF 560
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 152/369 (41%), Gaps = 43/369 (11%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+ A R F + + + W ++I A + + I ++ M +G P+ +
Sbjct: 284 SKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVIS 343
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+L + SN + K H + + LD V N L+ Y L A + F + +
Sbjct: 344 CMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQ 403
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W M+SGY G L +H
Sbjct: 404 NFEAWNLMVSGY--------------------------------------GATHLARSIH 425
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
++ + + +L+ MY K+G L A+ +F +P R+I TWN +IS A GH
Sbjct: 426 CYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFA 484
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL L+ K+ E + PN T V VLSAC H ++ G ++ + E + +
Sbjct: 485 EALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGG-KFEFNLSIATAL 543
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPN 417
+D+ +CG++ ++ E+ M + DV+ W +++ HG+ A +++ + +PN
Sbjct: 544 IDMYAKCGQLEKSREIFNSMH-ERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPN 602
Query: 418 NHGVYVVLS 426
VLS
Sbjct: 603 GLTFLAVLS 611
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 207/351 (58%), Gaps = 2/351 (0%)
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
S +P + F+Y MR+ G + + +FV++ + SL +Q+H + G D +
Sbjct: 2 SSSPTEGFFMYQEMRKKGLRADPVSLSFVIRCYIRICSLIGGEQVHARILSDGHQSDSLL 61
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME-- 210
+ L+ YS+ + A +VFDE+R R W +IS Y ++ R + L++FD ML
Sbjct: 62 LTNLMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGEL 121
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G EP+ VT +L ACA G LE GEKVH + RG++ L +L+ MY++ G L KA
Sbjct: 122 GCEPDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKA 181
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F M +N+ TW+A+ISGLA +G+ EA+ F ++ K ++P+D+TF GVLSAC +
Sbjct: 182 FGVFKGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNC 241
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G +D G IF M + +GI P I HYGCMVDLLGR G++ +A +LI M KPD +W
Sbjct: 242 GLVDKGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRT 301
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
LL AC+ H N+ + E VV+ +I L+ G YV+L N+Y+ ++ K E+
Sbjct: 302 LLGACRIHRNVILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTEL 352
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G+L A +F + + N W+ +I A + +AI + M + G P+ TFT
Sbjct: 173 SQFGNLDKAFGVFKGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFT 232
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKS-GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
VL ACSN ++ I +SK G+ ++H C+V + L+ A Q+ +R
Sbjct: 233 GVLSACSNCGLVDKGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRV 292
Query: 179 R-TLNVWTTMI 188
+ +W T++
Sbjct: 293 KPDSTIWRTLL 303
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 235/402 (58%), Gaps = 4/402 (0%)
Query: 31 LKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
LK++H + + ++ A+ +A + + G LSYA R+F SI+S WN LI
Sbjct: 411 LKELHCYSLKQEFVHNNELVANAFVA--SYAKCGSLSYAHRVFCSIRSKTVNSWNALIGG 468
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ S +P ++ Y M+ +G P+ T +L ACS ++SL K++H + ++ L+ D
Sbjct: 469 YSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERD 528
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
V L+ Y +L+ A +FD + ++TL W TM++GY Q+ AL LF QM++
Sbjct: 529 SFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVL 588
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
G +P +++ SV AC+ L LG + H + E A + +++ MY KNG++ +
Sbjct: 589 YGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVME 648
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
+ +F+ + ER++A+WNAM+ G HG A+EA+ LF ++++ P+++TF+GVL+AC H
Sbjct: 649 SFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNH 708
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL-IKRMVWKPDVVMW 388
+G + G MK ++G+ P ++HY C++D+L R GK+ EA ++ + M +P V +W
Sbjct: 709 SGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIW 768
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
LL++C+ H N+E+ E++ ++ EP YV+LSN+YA
Sbjct: 769 NFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYA 810
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 145/283 (51%), Gaps = 8/283 (2%)
Query: 32 KQIHAQMIISSRI-QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
++IH + S+R+ D +R++ ++ S D S + +F++++ N F WN +I +
Sbjct: 101 RKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRS--VFDALRKKNLFQWNAVISSY 158
Query: 91 ASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ + + +++ M +G P+ TF V+KAC+ V + +H V K+ L D
Sbjct: 159 SRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVED 218
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+ V N LV Y + +++A +VF + R L W +MI ++ + + E +L QM+
Sbjct: 219 VFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMME 278
Query: 210 E----GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+ F P+ TLA+VL CA+ + +G+ VH + ++ AL+ MY+K G
Sbjct: 279 KDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCG 338
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+ A+ +F +N+ +WN M+ G ++ G + DL R++
Sbjct: 339 CINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQM 381
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 182/386 (47%), Gaps = 11/386 (2%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H ++ + ++D F ++ L++F ++G +S A R+F + N WN++IR + +
Sbjct: 206 VHGLVVKTRLVEDVFVSNALVSF--YGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDN 263
Query: 94 LNPDKAIFLYMNMRRT----GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
++ L M F P+ T VL C+ R + K +H K LD +
Sbjct: 264 GLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKE 323
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+ V N L+ YS +N+A+ +F N+ + W TM+ G++ + ++ L QML
Sbjct: 324 VVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLA 383
Query: 210 EG--FEPNSVTLASVLSACAQSGCLELGEKVHVF-VKMRGFEMGAILGTALVHMYTKNGA 266
G + VT+ + + C + L +++H + +K ++ A V Y K G+
Sbjct: 384 GGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGS 443
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L+ A +F S+ + + +WNA+I G + +LD + +++ ++P+ T +LSA
Sbjct: 444 LSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSA 503
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C + +G+++ G + R +E Y ++ L CG++ A L M K +V
Sbjct: 504 CSQIKSLKLGKEVHGLIIR-NRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKT-LV 561
Query: 387 MWGALLAACKNHGNIEVAERVVKEII 412
W ++ +G E A + ++++
Sbjct: 562 SWNTMVNGYLQNGFPERALSLFRQMV 587
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 232 LELGEKVHVFVKMRG-FEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
++LG K+H V +L T ++ MY+ G+ ++++FD++ ++N+ WNA+IS
Sbjct: 97 IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVIS 156
Query: 291 GLASHGHAEEALDLFRKLEKEQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
+ + L++F K+ E ++P++ TF V+ AC + VG + G + + +
Sbjct: 157 SYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLV 216
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
E + +V G G V +A + K M + ++V W +++ ++G
Sbjct: 217 E-DVFVSNALVSFYGTNGSVSDALRVFKIMPER-NLVSWNSMIRVFSDNG 264
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 226/416 (54%), Gaps = 42/416 (10%)
Query: 47 HFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM 106
HF A R G L A ++F+ + W T+I A+ ++A+ ++ M
Sbjct: 300 HFYAER----------GLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELM 349
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCL----VRC--- 159
+ PN+ T V+ ACS++ +L K++H V + + L + N L V+C
Sbjct: 350 LLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCL 409
Query: 160 ------------------------YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Y+ DL +AR+ FD+ + W+ MI+GY+Q+
Sbjct: 410 VDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNN 469
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAILG 254
+ E+L LF +M+ G P TL SVLSAC Q CL LG+ +H FV + + L
Sbjct: 470 KPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLE 529
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
A+V MY K G++ A +F +MPERN+ +WN MI+G A++G A++A+++F ++
Sbjct: 530 NAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFE 589
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN+ITFV +L+AC H G I GR+ F +M+R YGI+P+ HY CMVDLLGR G + EA +
Sbjct: 590 PNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYK 649
Query: 375 LIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
LI M +P WGALL AC+ HGN+E+A ++ L+P + G+YV+L+N A
Sbjct: 650 LIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCA 705
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 229/437 (52%), Gaps = 38/437 (8%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P L+ + C +M QLKQI A+M ++ I F SR++AFCAL+ SGDL YA +FN ++
Sbjct: 159 PTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVE 218
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
PN FMWNT+IR ++ P A ++ M + + +F F LKAC ++ +
Sbjct: 219 QPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGES 278
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
++ V K G D +L V N L+ Y+ L NARQVFDE ++ + WTTMI GYA
Sbjct: 279 VYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDC 338
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
+ EA+ +F+ ML+ EPN VTL +V+SAC+ G LE+G++VH V+ + L A
Sbjct: 339 SEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNA 398
Query: 257 LVHMYTKNGALAKAKALFDSM-------------------------------PERNIATW 285
L+ MY K L A+ LFD M P +N W
Sbjct: 399 LLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCW 458
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI--FGSM 343
+AMI+G + + +E+L LF ++ + +VP + T V VLSAC +++G I + +
Sbjct: 459 SAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVV 518
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
++ + +E+ +VD+ +CG + A E+ M + +++ W ++A +G +
Sbjct: 519 GKIIPLSVTLEN--AIVDMYAKCGSIDAATEVFSTMP-ERNLISWNTMIAGYAANGRAKQ 575
Query: 404 AERVVKEI--IALEPNN 418
A V ++ + EPNN
Sbjct: 576 AINVFDQMRNMGFEPNN 592
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 240/462 (51%), Gaps = 53/462 (11%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
K++ Q K++H I + D F + L+ A + G + A ++FN ++ + WN
Sbjct: 279 KAVPQTKEVHGNAIRNGTFPDVFVGNALID--AYAKCGLMENAVKVFNMMEFKDVVSWNA 336
Query: 86 LIRAQASSLNPDKAIFLYMNMRR-----------------------------------TG 110
++ + S N + A L+ NMR+ +G
Sbjct: 337 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 396
Query: 111 FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS----------GLDLDLHVVNCLVRCY 160
PN T VL AC+++ + + +IH + K+ G D DL V N L+ Y
Sbjct: 397 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 456
Query: 161 SVSSDLNNARQVFDEI--RNRTLNVWTTMISGYAQSFRANEALMLFDQMLME--GFEPNS 216
S AR +FD+I R + WT MI G+AQ +N+AL LF +M+ E G PN+
Sbjct: 457 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 516
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGA-ILGTALVHMYTKNGALAKAKALF 274
T++ +L ACA + +G+++H +V + +E A + L+ MY+K G + A+ +F
Sbjct: 517 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 576
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
DSM +++ +W +M++G HG EALD+F K+ K VP+DITF+ VL AC H G +D
Sbjct: 577 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 636
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G F SM YG+ P+ EHY C +DLL R G++ +A +K M +P V+W ALL+A
Sbjct: 637 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
C+ H N+E+AE + +++ + N G Y ++SN+YA A K
Sbjct: 697 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWK 738
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 200/481 (41%), Gaps = 76/481 (15%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRI---------------QDHFAASRLLAFCALSS---S 62
L +CKS + + QIH Q+I S + + F + R L ++S
Sbjct: 43 LLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLAC 102
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G YA + + WN LIR D AI + M R G P+ T VL
Sbjct: 103 GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVL 162
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC + S C H + +G + ++ + N LV YS L A +FDEI R ++
Sbjct: 163 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 222
Query: 183 ---VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS------VTLASVLSACAQSGCLE 233
W +++S + +S A AL LF +M + E + +++ ++L AC +
Sbjct: 223 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 282
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
++VH G +G AL+ Y K G + A +F+ M +++ +WNAM++G +
Sbjct: 283 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 342
Query: 294 SHGHAEEALDLFRKLEKEQI-----------------------------------VPNDI 318
G+ E A +LF+ + KE I +PN +
Sbjct: 343 QSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCV 402
Query: 319 TFVGVLSACCHAGFIDVGRQIFG-SMKRVY--------GIEPKIEHYGCMVDLLGRCGKV 369
T + VLSAC G G +I S+K G + + Y ++D+ +C
Sbjct: 403 TIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 462
Query: 370 LEAEELIKRM-VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA----LEPNNHGVYVV 424
A + + + + +VV W ++ +G+ A ++ E+I+ + PN + + +
Sbjct: 463 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 522
Query: 425 L 425
L
Sbjct: 523 L 523
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 223/377 (59%), Gaps = 8/377 (2%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A S G + A ++F+ + + WNT+I + +A+ +++ MR GF ++ T
Sbjct: 105 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFT 164
Query: 118 FTFVLKACSNVRSLNC----CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ VL AC +NC CK++H K+ +DL+L+V L+ Y+ + +A QVF
Sbjct: 165 ISSVLSACG----VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVF 220
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
+ +++++ W++M++GY Q+ EAL+L+ + E N TL+SV+ AC+ L
Sbjct: 221 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 280
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G+++H + GF + ++ V MY K G+L ++ +F + E+N+ WN +ISG A
Sbjct: 281 EGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
H +E + LF K++++ + PN++TF +LS C H G ++ GR+ F M+ YG+ P +
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 400
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
HY CMVD+LGR G + EA ELIK + + P +WG+LLA+C+ + N+E+AE +++
Sbjct: 401 VHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE 460
Query: 414 LEPNNHGVYVVLSNMYA 430
LEP N G +V+LSN+YA
Sbjct: 461 LEPENAGNHVLLSNIYA 477
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 150/286 (52%), Gaps = 2/286 (0%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
N++ +L+ C+ ++ K H + + L+ D+ ++N L+ YS + ARQVF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
D + R+L W TMI Y ++ +EAL +F +M EGF+ + T++SVLSAC +
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
+K+H ++ +GTAL+ +Y K G + A +F+SM +++ TW++M++G
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+ + EEAL L+R+ ++ + N T V+ AC + + G+Q+ + + G +
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK-SGFGSNV 298
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
VD+ +CG + E+ +I V + ++ +W +++ H
Sbjct: 299 FVASSAVDMYAKCGSLRES-YIIFSEVQEKNLELWNTIISGFAKHA 343
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 233/440 (52%), Gaps = 44/440 (10%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL 71
PL PP S ++ Q KQIHA +I + HF + L
Sbjct: 75 PLQTPPTSPSQHDLSTLEQTKQIHAHII-----KTHFHHA-------------LQIPLND 116
Query: 72 FNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL 131
F S SP+ WN +I + P A+ +Y +R+ F + VLKAC V
Sbjct: 117 FPSGLSPS-AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWT 175
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW----TTM 187
K+IH V K GLD D+ V N L+ Y + + AR VFD++ R + W T +
Sbjct: 176 QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTAL 235
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR-- 245
+ YA+ A LF+ + + V+ ++++ C +S LE G K+ F++M+
Sbjct: 236 LDMYAKCGHLGLARQLFNGLT----QKTVVSWTAMIAGCIRSNRLEEGTKL--FIRMQEE 289
Query: 246 -------------GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
E+ IL TALV MY K G + A LF R+I WNA+I+G
Sbjct: 290 NIFPNEITMLNKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGF 349
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
A HG+ EEALD+F ++E++ + PNDITF+G+L AC HAG + G+++F M +G+ P+
Sbjct: 350 AMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQ 409
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
IEHYGCMVDLLGR G + EA E+IK M KP+ ++WGAL+AAC+ H N ++ E +++
Sbjct: 410 IEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL 469
Query: 413 ALEPNNHGVYVVLSNMYAEA 432
+EP N G V++SN+YA A
Sbjct: 470 EIEPENCGYNVLMSNIYAAA 489
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 231/409 (56%), Gaps = 4/409 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ + +++H MI + + + +RL+ + L A +F+ + N W
Sbjct: 104 RAIREGQRVHTHMIKTCYLPSVYLRTRLIVL--YNKCDCLGDAREMFDEMPQKNVVSWTA 161
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I A + +A+ L++ M R+ PN TF +L +C +QIH+ K
Sbjct: 162 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 221
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ + V + L+ Y+ S + +A VF + R + T +ISGYAQ EAL LF
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
Q+ +EG NSVT ASVL+A + L G++VH V G +L +L+ MY+K G
Sbjct: 282 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 341
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVL 324
+ A+ +FDSMPER +WNAM+ G + HG A E L+LF+ + +E ++ P+ IT++ VL
Sbjct: 342 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 401
Query: 325 SACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
S C H D+G +IF +M GIEP I HYGC+VDLLGR G+V EA + IK+M + P
Sbjct: 402 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 461
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG+LL +C+ H ++E+ V ++++ LEP N G YV+LSN+YA A
Sbjct: 462 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASA 510
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EAL+ QM + G E ++L+ C + G++VH + + L T L
Sbjct: 75 KEALL---QMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRL 131
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ +Y K L A+ +FD MP++N+ +W AMIS + G A EAL+LF ++ + PN
Sbjct: 132 IVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNH 191
Query: 318 ITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
TF +L++C + + GRQI ++KR Y E + ++D+ + G++ +A +
Sbjct: 192 FTFATILTSCYGSLGFETGRQIHSIAIKRNY--ESHMFVGSSLLDMYAKSGRICDAHGVF 249
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ + DVV A+++ G E A ++ +++
Sbjct: 250 HCLPER-DVVACTAIISGYAQMGLDEEALKLFRQL 283
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 257/451 (56%), Gaps = 15/451 (3%)
Query: 8 LRQPPLPIP-PLSLLADKCKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFCALSSSG 63
L Q P P LL C + L Q +H +I QD F A++L+ S
Sbjct: 70 LSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINM--YSELD 127
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
+ A ++F+ + ++WN L RA + + + LY M R G ++ T+T+VLK
Sbjct: 128 SIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLK 187
Query: 124 AC----SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
AC + V L ++IH H+ + G + +H++ L+ Y+ + NA +VFD++ +
Sbjct: 188 ACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVK 247
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE--PNSVTLASVLSACAQSGCLELGEK 237
+ W+ MI+ Y+++ + EAL LF +M++E + PNSVT+ SVL ACA LE G+
Sbjct: 248 NVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKL 307
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H ++ RG + + +ALV +Y + G L +F+ M +R++ +WN++IS HG
Sbjct: 308 MHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGF 367
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+A+ +F+++ + + P+ I+FV VL AC HAG ++ G+ +F SM R + I P +EHY
Sbjct: 368 GRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYA 427
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVDLLGR ++ EA ++I M +P +WG+LL +C+ H N+E+AER + LEP
Sbjct: 428 CMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPT 487
Query: 418 NHGVYVVLSNMYAEAESMKMQLEILLVQVLF 448
N G YV+L+++YAEA KM E+ V++L
Sbjct: 488 NAGNYVLLADIYAEA---KMWNEVKRVKMLL 515
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSV--TLASVLSACAQSGCLELGEKVHVFVKM 244
+I + N+AL + Q EPN T ++ +C + L G +H +
Sbjct: 53 LIQSLCKQGNLNQALQVLSQ------EPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
G + L T L++MY++ ++ A+ +FD +R I WNA+ L G+ E LDL
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHA-GFIDV---GRQIFGSMKRVYGIEPKIEHYGCMV 360
+R++ + + + T+ VL AC + F+ + GR+I G + R +G E + ++
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILR-HGFEGHVHIMTTLL 225
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALEP 416
D+ R G VL A + +M K +VV W A++A +G +E+ +++ E L P
Sbjct: 226 DMYARFGCVLNASRVFDQMPVK-NVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLP 284
Query: 417 NN 418
N+
Sbjct: 285 NS 286
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 218/402 (54%), Gaps = 3/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K IH + + D + L++ A G + A FN + S + WN+LI A
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYA--KCGFFTAALTTFNRMSSRDIVTWNSLINGYA 507
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+P AI ++ +R + P+ T V+ AC+ + L+ IH + K G + D H
Sbjct: 508 QIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCH 567
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ Y+ L +A +F++ V W +I+ Y Q+ A EA+ F QM +E
Sbjct: 568 VKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLE 627
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
F PNSVT SVL A A G H + GF ++G +L+ MY K G L +
Sbjct: 628 NFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYS 687
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ LF+ M ++ +WNAM+SG A HGH + A+ LF +++ Q+ + ++FV VLSAC H
Sbjct: 688 EKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHX 747
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G ++ GR+IF SM Y I+P +EHY CMVDLLGR G E IK M +PD +WGA
Sbjct: 748 GLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGA 807
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LL +C+ H N+++ E + ++ LEP N +VVLS++YA++
Sbjct: 808 LLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQS 849
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 212/399 (53%), Gaps = 9/399 (2%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L CK ++ L QIHAQ+I+S + H + + L+ +L DL A +F+S +P+
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSG-FKHHHSITHLINLYSLFHKCDL--ARSVFDSTPNPSR 94
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+WN++IRA S ++A+ +Y M G P+++TFTFVLKAC+ +L H
Sbjct: 95 ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGE 154
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ + GL+ D+ + LV YS DL AR+VFD++ R + W MI+G +QS EA
Sbjct: 155 IDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEA 214
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ F M + G EP+SV+L ++ + +EL +H +V R F + + L+ +
Sbjct: 215 VDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF--SSAVSNGLIDL 272
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y+K G + A+ +FD M +++ +W M++G A +G E L+LF K++ + N ++
Sbjct: 273 YSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V A ++ G++I G + I+ I ++ + +CG+ +A++L +
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQ-QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQ 391
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPN 417
+ D+V W A++AA G E A + +E+ ++PN
Sbjct: 392 GR-DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPN 429
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 167/345 (48%), Gaps = 1/345 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S GD+ A R+F+ + + W T++ A + + + L+ M+ N+ +
Sbjct: 274 SKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAV 333
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
A + L K+IH + +D D+ V L+ Y+ + A+Q+F ++ R
Sbjct: 334 SAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR 393
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
L W+ +I+ Q+ EAL LF +M + +PN VTL S+L ACA L+LG+ +H
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIH 453
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
F + GTALV MY K G A F+ M R+I TWN++I+G A G
Sbjct: 454 CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPY 513
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
A+D+F KL I P+ T VGV+ AC +D G I G + ++ G E +
Sbjct: 514 NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESDCHVKNAL 572
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+D+ +CG + AE L + + D V W ++AA +G+ + A
Sbjct: 573 IDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 169/333 (50%), Gaps = 4/333 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S GDL A +F+ + + WN +I + S +P +A+ + +M+ G P+ +
Sbjct: 175 SKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLL 234
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
+ + ++ C+ IH +V + D V N L+ YS D++ AR+VFD++ ++
Sbjct: 235 NLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQ 292
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W TM++GYA + E L LFD+M + N V+ S A A++ LE G+++H
Sbjct: 293 DDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ + ++ T L+ MY K G KAK LF + R++ W+A+I+ L G+ E
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL LF++++ +++ PN +T + +L AC + +G+ I + ++ + +
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA-DMDSDLSTGTAL 471
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
V + +CG A RM + D+V W +L+
Sbjct: 472 VSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLI 503
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 227/404 (56%), Gaps = 5/404 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI--QSPNHFMWNTLIRA 89
++IH+Q+ S D + L+ A SG L+ A +F+SI S + T+I A
Sbjct: 373 RKIHSQITASGIDADPIVQNSLINMYA--RSGLLAEAREVFDSILENSKTVVSFTTMISA 430
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL- 148
A + +P +A+ ++ M G APN+ TF VL AC + L IH + +SGLD
Sbjct: 431 YAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSS 490
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D N LV Y+ DL A +VF+ ++ + L WTT+I+ QS AL L+D+ML
Sbjct: 491 DPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRML 550
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G P+ TL+++L ACA G L +GEK+H E A AL MY K G+L
Sbjct: 551 QSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLE 610
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
KA L+ ++ATW +M++ + G A AL+L+ ++E E + PN++TF+ VL +C
Sbjct: 611 KATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCS 670
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
AG + GR+ F S+ YG +P EH+GCMVD+LGR GK+ +AEEL+ M + PD + W
Sbjct: 671 QAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAW 730
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+LL++CK H + E+ R + ++ L+P + +V LS +YA A
Sbjct: 731 QSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALSQIYAAA 774
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 192/407 (47%), Gaps = 12/407 (2%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ +++HA I+S R+ + L+ F + A LF+++ F WN
Sbjct: 64 RALDHGRRVHAH-IVSRRLARNALLGELV-FQMYARCRCFDTAIALFDAMPDRRPFCWNV 121
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
L++ ++ P + LY M P+ F + + AC ++ L + IH V+ +G
Sbjct: 122 LMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIHYRVA-TG 180
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
++ + + LV Y+ ++ A FD+ R W ++S A + A+ LF
Sbjct: 181 RGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFF 240
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM E + + + A L ACA +G L G ++H ++ ++ AL+ MY + G
Sbjct: 241 QM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCG 298
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L +A +F MP RN+ +W +MI+ +A GH ++ LF + E I PN+ T+ V+S
Sbjct: 299 KLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVS 358
Query: 326 ACCHAG---FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
A H G +D GR+I + GI+ ++++ R G + EA E+ ++
Sbjct: 359 AIAHLGRDAILDRGRKIHSQIT-ASGIDADPIVQNSLINMYARSGLLAEAREVFDSILEN 417
Query: 383 PD-VVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
VV + +++A ++G+ A + +E+ A + PN VL+
Sbjct: 418 SKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLA 464
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 152/312 (48%), Gaps = 9/312 (2%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ +L+ C N R+L+ +++H H+ L + + + + Y+ + A +FD +
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+R W ++ + + R + L L+ +M +E +P++ + AC + L G
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H V G + + + +ALV MY + G + A A FD E A WNA++S LA GH
Sbjct: 173 IHYRVAT-GRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK-RVYGIEPKIEHY 356
A++LF ++E+ Q +D + L AC AG + G QI ++ ++G ++
Sbjct: 232 HRRAIELFFQMEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGT--RVLVL 287
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--L 414
++ + RCGK+ EA + M + +VV W +++AA G+ + ++ +IA +
Sbjct: 288 NALISMYVRCGKLDEALRVFADMPHR-NVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGI 346
Query: 415 EPNNHGVYVVLS 426
PN V+S
Sbjct: 347 NPNEKTYASVVS 358
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
R ++AL+ D+ L + A++L C L+ G +VH + R A+LG
Sbjct: 31 RLDDALLRLDK-LRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGE 89
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
+ MY + A ALFD+MP+R WN ++ + + L+L+R++ E P
Sbjct: 90 LVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQP 149
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ F+ + AC + GR I + GI I+ +V + +CG++
Sbjct: 150 SACGFMWAIVACGRIKDLAQGRSIHYRVATGRGINSSIQ--SALVTMYAQCGRI 201
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 242/424 (57%), Gaps = 4/424 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++H+++++ D + + LLA A GD+ A +F+ + + WNT+I A
Sbjct: 181 RRVHSEVVVCGLESDIYVGNSLLAMYA--KFGDMGTARMVFDRMAERDLTSWNTMISGYA 238
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL-DLDL 150
+ + A ++ M + G + T +L AC++++++ K IH + ++ + + +
Sbjct: 239 KNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNK 298
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
N L+ Y + + +AR++F+ +R + W +MI GYA++ A E+L LF +M ++
Sbjct: 299 FFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALD 358
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G P+ VT +VL AC Q L G +H ++ +GF+ I+GTALV MY+K G+LA +
Sbjct: 359 GSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACS 418
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ +FD MP++++ +W+AM++G HG EA+ + ++ ++P++ F +LSAC HA
Sbjct: 419 RRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHA 478
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + G++IF M++ Y ++P + HY CMVDLLGR G + EA +I+ M KP +W A
Sbjct: 479 GLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAA 538
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAG 450
LL A + H NI++AE +++ + P Y+ LSN+YA AE +E + V G
Sbjct: 539 LLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYA-AEKRWDDVERVRAMVRRKG 597
Query: 451 LASA 454
L +
Sbjct: 598 LKKS 601
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 208/405 (51%), Gaps = 18/405 (4%)
Query: 7 SLRQPPLPIPPLSLLA--------DKCKSMHQLKQIHAQMIISSRIQDH-FAASRLLAFC 57
S+R+ PL PL+ L KS Q +Q+HA MI S ++++ + ++L AF
Sbjct: 46 SMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFY 105
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A G +S A +F+ I N F+WN +IR AS+ P K++ LY M G + T
Sbjct: 106 A--GCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFT 163
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ FVLKAC ++ + +++H+ V GL+ D++V N L+ Y+ D+ AR VFD +
Sbjct: 164 YPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMA 223
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R L W TMISGYA++ + A ++FD M G + TL +LSACA ++ G+
Sbjct: 224 ERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKV 283
Query: 238 VHVF-VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+H + V+ +L+ MY + A+ LF+ + ++ +WN+MI G A +G
Sbjct: 284 IHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNG 343
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
A E+L LFR++ + P+ +TF+ VL AC + G I + + G +
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVK-KGFDANTIVG 402
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPD--VVMWGALLAACKNHG 399
+VD+ +CG + + + M PD +V W A++A HG
Sbjct: 403 TALVDMYSKCGSLACSRRVFDEM---PDKSLVSWSAMVAGYGLHG 444
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 221/388 (56%), Gaps = 3/388 (0%)
Query: 49 AASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR 108
A + L A+C GD+ A +F+ + + N WN +I A + + +A+ L+ M
Sbjct: 199 ATAILDAYC---KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE 255
Query: 109 TGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN 168
G + L+AC + L+ ++H + + GLD ++ V+N L+ YS ++
Sbjct: 256 EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDL 315
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
A VFDE+ RT W MI G AQ+ + +A+ LF +M +E +P+S TL SV+ A A
Sbjct: 316 ASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD 375
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
+H + + + TAL+ MY K G + A+ LF+S ER++ TWNAM
Sbjct: 376 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAM 435
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
I G SHG + A++LF +++ IVPN+ TF+ VLSAC HAG +D GR+ F SMK YG
Sbjct: 436 IHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYG 495
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
+EP +EHYG MVDLLGR GK+ EA I++M P + ++GA+L ACK H N+E+AE
Sbjct: 496 LEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESA 555
Query: 409 KEIIALEPNNHGVYVVLSNMYAEAESMK 436
++I L P +V+L+N+YA A K
Sbjct: 556 QKIFELGPQEGVYHVLLANIYANASMWK 583
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 207/427 (48%), Gaps = 11/427 (2%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
SS PP+ SLL C + L + +HAQ+ + AA+ L A
Sbjct: 51 SSAGAPPVLRTFTSLL-KLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRR 109
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHTFTFV 121
+ A R+F+ + + WN L+ A + A+ + + M+ G P+ T V
Sbjct: 110 P--ADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSV 167
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC+N R+L C++ H +SGL+ ++V ++ Y D+ AR VFD + +
Sbjct: 168 LPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNS 227
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W MI GYAQ+ + EAL LF++M+ EG + V++ + L AC + GCL+ G +VH
Sbjct: 228 VSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHEL 287
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ G + + AL+ MY+K + A +FD + R +WNAMI G A +G +E+A
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+ LF +++ E + P+ T V V+ A R I G R++ ++ + ++D
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALID 406
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNH 419
+ +CG+V A L + V+ W A++ +HG + A + +E+ I + PN
Sbjct: 407 MYAKCGRVNIARILFNS-ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNET 465
Query: 420 GVYVVLS 426
VLS
Sbjct: 466 TFLSVLS 472
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 161/322 (50%), Gaps = 3/322 (0%)
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
+RA A+ + A+ ++ M G P TFT +LK C+ L + +H ++ G+
Sbjct: 31 LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D + L Y+ +AR+VFD + R W +++GYA++ A A+ + +
Sbjct: 91 DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 207 ML-MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
M EG P+S+TL SVL ACA + L + H F G E + TA++ Y K G
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ A+ +FD MP +N +WNAMI G A +G + EAL LF ++ +E + D++ + L
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC G +D G ++ + R+ G++ + ++ + +C +V A + + +
Sbjct: 271 ACGELGCLDEGMRVHELLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ- 328
Query: 386 VMWGALLAACKNHGNIEVAERV 407
V W A++ C +G E A R+
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRL 350
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL F M G P T S+L CA G L G VH + RG + A+ TAL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPNDI 318
MY K A A+ +FD MP R+ WNA+++G A +G A A+++ ++++E+ P+ I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
T V VL AC +A + R+ R G+E + ++D +CG + A +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIR-SGLEELVNVATAILDAYCKCGDIRAARVVFD- 220
Query: 379 MVWKP--DVVMWGALLAACKNHGNIEVA----ERVVKE 410
W P + V W A++ +G+ A R+V+E
Sbjct: 221 --WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEE 256
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 226/401 (56%), Gaps = 3/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++H Q+ D F + L+A A G++ A +F + W ++I A
Sbjct: 193 RRVHGQIFRHGFESDVFVQNGLVALYA--KCGEIVRANAVFGRLVDRTIVSWTSIISGYA 250
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ P +A+ ++ MR+T P+ VL+A ++V L K IH V K GL+ +
Sbjct: 251 QNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFD 310
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
++ L Y+ + AR F+++ N +L W MISGY ++ A EA+ LF M +
Sbjct: 311 LLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKN 370
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
P+S+T+ S ++ACAQ G LEL + ++ M F I+ T+L+ Y K G++ A+
Sbjct: 371 IRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMAR 430
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FD +P++++ W+AM+ G HG E++ LF + + + PND+TFVG+L+AC ++G
Sbjct: 431 FVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSG 490
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G +F M R YGIEP+ +HY C+VDLLGR G + A + M +P V +WGAL
Sbjct: 491 LVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGAL 549
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L+ACK H ++ + E + + +L+P N G YV LSN+YA +
Sbjct: 550 LSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASS 590
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 201/383 (52%), Gaps = 9/383 (2%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
SL+ D H L QI+A+++++ F ++L+ S+ G++S A +LF+ P
Sbjct: 80 SLIDDSIHKTH-LNQIYAKLLVTGLQYGGFLIAKLVN--KASNIGEVSCARKLFDKFPDP 136
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ F+WN ++R + AI +Y M+ +P+ +F VLKACS + +L +++H
Sbjct: 137 DVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVH 196
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ + G + D+ V N LV Y+ ++ A VF + +RT+ WT++ISGYAQ+ +
Sbjct: 197 GQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPI 256
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL +F +M P+ + L SVL A LE G+ +H V G E L +L
Sbjct: 257 EALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLT 316
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+Y K G + A+ F+ + ++ WNAMISG +G+AEEA++LFR ++ + I P+ I
Sbjct: 317 SLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSI 376
Query: 319 TFVGVLSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
T ++AC G +++ R + + SM + ++D +CG V A +
Sbjct: 377 TVTSSIAACAQIGSLELARWMDEYISMSE---FRNDVIVNTSLIDTYAKCGSVDMARFVF 433
Query: 377 KRMVWKPDVVMWGALLAACKNHG 399
R+ K DVV+W A++ HG
Sbjct: 434 DRIPDK-DVVVWSAMMVGYGLHG 455
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 209/363 (57%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A RLF + + W T++ + +A+ ++ MR G A +Q+TF +L AC
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ +L KQIH ++ ++ D ++ V + LV YS + A VF + + + WT +
Sbjct: 285 LSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTAL 344
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I GY Q+ + EA+ +F +M +G +P+ TL SV+S+CA LE G + H + G
Sbjct: 345 IVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGL 404
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ ALV +Y K G++ A LFD M + +W A++SG A G A+E +DLF K
Sbjct: 405 MHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEK 464
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ + + P+ +TF+GVLSAC AGF++ GR F SM++ +GI P +HY CM+DL R G
Sbjct: 465 MLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSG 524
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
K+ EAEE IK+M PD + WG LL+AC+ G++E+ + + ++ ++P N YV+L +
Sbjct: 525 KLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCS 584
Query: 428 MYA 430
M+A
Sbjct: 585 MHA 587
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 217/460 (47%), Gaps = 44/460 (9%)
Query: 2 SLKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSS 61
+L C LR LP PP + L + + + HA+ + R+ D L + AL S
Sbjct: 26 ALHCVILRT--LPHPPPTYLLNHLLTAYGKAGRHAR---ARRVFDAMPHPNLFTYNALLS 80
Query: 62 SGD----LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR--TGFAPNQ 115
+ LS LF S+ + +N +I + + +A+ +Y+ + + + P++
Sbjct: 81 TLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSR 140
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
T + ++ A S + KQ H + + G + V + LV Y+ S + +A++ FDE
Sbjct: 141 ITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDE 200
Query: 176 IRNRTLNV-------------------------------WTTMISGYAQSFRANEALMLF 204
+ ++ + + WTTM++G+ Q+ +EAL +F
Sbjct: 201 VDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIF 260
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M +G + T S+L+AC LE G+++H ++ ++ +G+ALV MY+K
Sbjct: 261 RRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKC 320
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
++ A+ +F M +NI +W A+I G +G +EEA+ +F +++++ I P+D T V+
Sbjct: 321 RSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVI 380
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
S+C + ++ G Q F + V G+ I +V L G+CG + +A L M + D
Sbjct: 381 SSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-D 438
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
V W AL++ G + + ++++A GV +
Sbjct: 439 QVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFI 478
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 135/276 (48%), Gaps = 6/276 (2%)
Query: 27 SMHQLKQIHAQMIISSRIQDH-FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
++ Q KQIHA II +R D+ F S L+ S + A +F + N W
Sbjct: 287 ALEQGKQIHA-YIIRTRYDDNVFVGSALVDM--YSKCRSIKLAETVFRRMTCKNIISWTA 343
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
LI + ++A+ ++ M+R G P+ +T V+ +C+N+ SL Q H SG
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSG 403
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
L + V N LV Y + +A ++FDE+ WT ++SGYAQ RA E + LF+
Sbjct: 404 LMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFE 463
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEK-VHVFVKMRGFEMGAILGTALVHMYTKN 264
+ML +G +P+ VT VLSAC+++G +E G H K G T ++ +Y+++
Sbjct: 464 KMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRS 523
Query: 265 GALAKAKALFDSMPERNIAT-WNAMISGLASHGHAE 299
G L +A+ MP A W ++S G E
Sbjct: 524 GKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%)
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
P S A++LSA A++ G V ++ L L+ Y K G A+A+
Sbjct: 3 RPLSSQYAALLSAAARTEPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARR 62
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FD+MP N+ T+NA++S LA + LF + + IV + G HA
Sbjct: 63 VFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQA 122
Query: 333 IDV 335
+ V
Sbjct: 123 VRV 125
>gi|125563703|gb|EAZ09083.1| hypothetical protein OsI_31349 [Oryza sativa Indica Group]
Length = 503
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 212/358 (59%), Gaps = 6/358 (1%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR--SLNCCKQIHTH 140
+N L+ ASS +P A L++ +RR G P+ HT VLKA + + SL +H+
Sbjct: 72 FNLLLPPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSE 131
Query: 141 VSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
K GL ++V N L+ YS L A QVFDE+ RT+ W T ++ A +
Sbjct: 132 AVKDGLASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGHHEL 191
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
+ LF +ML G P+ T +LSA A+ G L LG+ H V R +M LGTA V+
Sbjct: 192 CVELFAEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVN 251
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY+K GA++ A LF+ MP RN+ TW AMI G A +G A+EAL+LF +++ +I+PN +T
Sbjct: 252 MYSKCGAVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVT 311
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+G+L AC HAG +D GR+ F M+ VYGI P + HY MVD+LGR G + EA + + M
Sbjct: 312 FLGLLCACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGM 371
Query: 380 VWKPDVVMWGALLAACKNHGN---IEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
+ D V+W LLAAC+ H + IE+ ++V +++ LEP G YV++SN+Y E S
Sbjct: 372 PVEADPVVWRTLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGS 429
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 234/431 (54%), Gaps = 18/431 (4%)
Query: 18 LSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATRLFN 73
LS+ + C S+ + KQ HA II RI + A C+L S G L + + F
Sbjct: 84 LSIALNACSSLESITLGKQFHA-FIIKYRISHDSSIGN--ALCSLYSKFGSLDSSVKAFR 140
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC 133
+ W T+I A + + L++ M PN T T VL CS ++S +
Sbjct: 141 ETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDL 200
Query: 134 CKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
Q+H+ +K G + +L + N LV Y ++ A+ +F+ + + L W MI+G+AQ
Sbjct: 201 GMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQ 260
Query: 194 S-------FRAN----EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+ F A EAL ++ ++ G +P+ TL+S+L+ C++ LE GE++H
Sbjct: 261 AMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQT 320
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
GF ++GTALV MY K G++ +A+ F M R + +W +MI+ A HG ++ AL
Sbjct: 321 IKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHAL 380
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
LF + PN ITFVGVL+AC HAG +D + F M++ Y I+P ++HYGC+VD+
Sbjct: 381 QLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDM 440
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
R G++ EA ++IKRM +P+ +W L+A C+NHGN E+ ++++ L+P + Y
Sbjct: 441 FVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETY 500
Query: 423 VVLSNMYAEAE 433
VVL NMY AE
Sbjct: 501 VVLLNMYISAE 511
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 190/397 (47%), Gaps = 17/397 (4%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+HA +I + ++ F S L+ A G + A ++F+++ N +W TL+ +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYA--KCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQN 59
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
P+ A+ ++ +M +G P+ T + L ACS++ S+ KQ H + K + D +
Sbjct: 60 SQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIG 119
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
N L YS L+++ + F E + + WTT+IS + RA L LF +ML E E
Sbjct: 120 NALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVE 179
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
PN TL SVLS C+ +LG +VH G E + +LV++Y K G + +AK L
Sbjct: 180 PNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNL 239
Query: 274 FDSMPERNIATWNAMISG-----------LASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
F+ M +N+ TWNAMI+G ++ EAL ++ KL + P+ T
Sbjct: 240 FNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSS 299
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+L+ C ++ G QI + G + +VD+ +CG + A + M +
Sbjct: 300 ILTVCSRLAALEQGEQIHAQTIKS-GFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKE--IIALEPN 417
++ W +++ + HG + A ++ ++ + PN
Sbjct: 359 T-LISWTSMITSFARHGQSQHALQLFEDMRLAGFRPN 394
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 226/426 (53%), Gaps = 42/426 (9%)
Query: 47 HFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM 106
H + L A+ AL SG +A LF+ + + + + RA A S +A+ L+ +M
Sbjct: 47 HLPTALLSAYGALGRSG---HARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDM 103
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNC----CKQIHTHVSKSGLDLDLHVVNCLVRCYSV 162
GF P+ VL AC S + +H + G++ D+ V L+R Y
Sbjct: 104 IADGFMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGE 163
Query: 163 SSDLNNARQVFDE----------------IRNRTLNV---------------WTTMISGY 191
++ AR+VFD +RN+ + W T+I+GY
Sbjct: 164 RGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGY 223
Query: 192 AQSFRANEALMLFDQMLMEG---FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
R EAL LF QM+ PN T+++VLSACA +GCLE G VH+++
Sbjct: 224 CLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMN 283
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRK 307
L L+ MY K G++ KA +F+ P +R++ +W +I GLA HG A + L +F
Sbjct: 284 DNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSM 343
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
++ + P+D+TFVGVL+AC H G +D G F SM+ Y I PKIEHYGCM+DLLGR G
Sbjct: 344 MQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLLGRVG 403
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
++ EA +I+ M KP++V+WGA L+ACK H ++E+ E E+ L+P++ V++S+
Sbjct: 404 RLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVELGEIAAAEVTRLDPDDPWARVMMSS 463
Query: 428 MYAEAE 433
MYA+A+
Sbjct: 464 MYAKAQ 469
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
GA L TAL+ Y G A+ LFD MP +++ AM A G A +ALDLF+ +
Sbjct: 45 GAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMI 104
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY----GIEPKIEHYGCMVDLLGR 365
+ +P+++ VL+AC AG R+ G M + GIEP + ++ + G
Sbjct: 105 ADGFMPDNVALAVVLAACHGAGSC-TARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGE 163
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
G++ A + M K + W ++ + +IE A R+
Sbjct: 164 RGEMTVARRVFDSMPTK-STIAWNTMVHQYVRNKDIEAAYRL 204
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 241/471 (51%), Gaps = 55/471 (11%)
Query: 12 PLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCA-LSSSGDLSYATR 70
PL P +LL ++ H L+ +HA +++S R+ + S L AF A L+SS LSYA R
Sbjct: 4 PLLRDPTTLLPSLAEASH-LRALHAHLVVSGRLA---SPSHLAAFLASLASSNHLSYA-R 58
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK------- 123
L + N IRA A P + R P+ ++ F+++
Sbjct: 59 LVLPQRPATLLAHNAFIRALARGPRP---CLAFAAFRDLPLPPDHYSLNFLVRAATALVA 115
Query: 124 -------ACSNVRSLNCCKQIHTHVSKSGLDLDLHV------------------------ 152
+ V + H + G D HV
Sbjct: 116 SAAEEKHVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEI 175
Query: 153 -------VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
V +V + D++ AR +FD + R W+ MI+GY R+ EALMLFD
Sbjct: 176 ACPDVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFD 235
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+ML G TL SVL+ACAQ G L+ G+ VH +V+ RG +M LGTALV MY+K G
Sbjct: 236 EMLSAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCG 295
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
A+ A +F+SM ERN+ TW + +SGLA +G E L LF+++E I PN ++FV VL
Sbjct: 296 AVVTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLR 355
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
C AG +D GR F SM + YG++P EHYGCMVDL GR G++ +A I M +P
Sbjct: 356 GCSMAGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHE 414
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+WGALL A + H ++++ + + +++A+E N +V LSN+YAE+++ K
Sbjct: 415 GVWGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWK 465
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 221/388 (56%), Gaps = 3/388 (0%)
Query: 49 AASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR 108
A + L A+C GD+ A +F+ + + N WN +I A + + +A+ L+ M
Sbjct: 199 ATAILDAYC---KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE 255
Query: 109 TGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN 168
G + L+AC + L+ ++H + + GLD ++ V+N L+ YS ++
Sbjct: 256 EGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDL 315
Query: 169 ARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ 228
A VFDE+ RT W MI G AQ+ + +A+ LF +M +E +P+S TL SV+ A A
Sbjct: 316 ASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD 375
Query: 229 SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAM 288
+H + + + TAL+ MY K G + A+ LF+S ER++ TWNAM
Sbjct: 376 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAM 435
Query: 289 ISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
I G SHG + A++LF +++ IVPN+ TF+ VLSAC HAG +D GR+ F SMK YG
Sbjct: 436 IHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYG 495
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
+EP +EHYG MVDLLGR GK+ EA I++M P + ++GA+L ACK H N+E+AE
Sbjct: 496 LEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESA 555
Query: 409 KEIIALEPNNHGVYVVLSNMYAEAESMK 436
++I L P +V+L+N+YA A K
Sbjct: 556 QKIFELGPQEGVYHVLLANIYANASMWK 583
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 207/427 (48%), Gaps = 11/427 (2%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
SS PP+ SLL C + L + +HAQ+ + AA+ L A
Sbjct: 51 SSAGAPPVLRTFTSLL-KLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRR 109
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT-GFAPNQHTFTFV 121
+ A R+F+ + + WN L+ A + A+ + + M+ G P+ T V
Sbjct: 110 P--ADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSV 167
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L AC+N R+L C++ H +SGL+ ++V ++ Y D+ AR VFD + +
Sbjct: 168 LPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNS 227
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W MI GYAQ+ + EAL LF++M+ EG + V++ + L AC + GCL+ G +VH
Sbjct: 228 VSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHEL 287
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ G + + AL+ MY+K + A +FD + R +WNAMI G A +G +E+A
Sbjct: 288 LVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDA 347
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+ LF +++ E + P+ T V V+ A R I G R++ ++ + ++D
Sbjct: 348 VRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALID 406
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNH 419
+ +CG+V A L + V+ W A++ +HG + A + +E+ I + PN
Sbjct: 407 MYAKCGRVNIARILFNS-ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNET 465
Query: 420 GVYVVLS 426
VLS
Sbjct: 466 TFLSVLS 472
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 155/310 (50%), Gaps = 3/310 (0%)
Query: 99 AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR 158
A+ ++ M G P TFT +LK C+ L + +H ++ G+D + L
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 159 CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSV 217
Y+ +AR+VFD + R W +++GYA++ A A+ + +M EG P+S+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
TL SVL ACA + L + H F G E + TA++ Y K G + A+ +FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
P +N +WNAMI G A +G + EAL LF ++ +E + D++ + L AC G +D G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
++ + R+ G++ + ++ + +C +V A + + + V W A++ C
Sbjct: 283 RVHELLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ-VSWNAMILGCAQ 340
Query: 398 HGNIEVAERV 407
+G E A R+
Sbjct: 341 NGCSEDAVRL 350
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL F M G P T S+L CA G L G VH + RG + A+ TAL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPNDI 318
MY K A A+ +FD MP R+ WNA+++G A +G A A+++ ++++E+ P+ I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
T V VL AC +A + R+ R G+E + ++D +CG + A +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIR-SGLEELVNVATAILDAYCKCGDIRAARVVFD- 220
Query: 379 MVWKP--DVVMWGALLAACKNHGNIEVA----ERVVKE 410
W P + V W A++ +G+ A R+V+E
Sbjct: 221 --WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEE 256
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 208/373 (55%), Gaps = 5/373 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S GD+ A LF+ + +P+ +N LI + + + ++ L+ + +G+ PN T
Sbjct: 258 SKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLV 317
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ S + +H V K+ LD D V L Y +D+ +AR +FD + +
Sbjct: 318 AVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEK 377
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
T+ W MISGYAQ+ A+ LF M +PN +T++S LSACA G L LG+ VH
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVH 437
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ E+ + TAL+ MY K G++A+A+++FD M +N+ +WNAMISG HG
Sbjct: 438 RIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGA 497
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL L++ + +I+P TF+ V+ AC H G +D G+++F M Y I P IEH CM
Sbjct: 498 EALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCM 557
Query: 360 VDLLGRCGKVLEAEELIKRM---VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
VDLLGR GK+ EA ELI P V WGALL AC H N ++A+ +++ L+
Sbjct: 558 VDLLGRAGKLNEALELISEFPQSAIGPGV--WGALLGACMVHKNSDLAKLASQKLFELDS 615
Query: 417 NNHGVYVVLSNMY 429
N G YV+LSN+Y
Sbjct: 616 ENAGYYVLLSNLY 628
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 197/382 (51%), Gaps = 9/382 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ +H + + D F AS L S GD A ++F+++ SP+ +WNTL+
Sbjct: 134 RTLHGLSVAAGYAADTFVASALAKLYFKLSRGD--DARKVFDTVPSPDTILWNTLL---- 187
Query: 92 SSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
+ L +A+ ++ M G P+ T L+A + + + +H + K GL
Sbjct: 188 AGLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHE 247
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
HVV L+ YS D+++A+ +FD + N L + +ISGY+ + ++ LF ++
Sbjct: 248 HVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTAS 307
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G+ PNS TL +V+ + G L +H FV + A++ TAL +Y + + A
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+++FD+M E+ + +WNAMISG A +G E A+ LF+ +++ + PN IT LSAC H
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHL 427
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G + +G+ + + + +E + ++D+ +CG + EA + RM K +VV W A
Sbjct: 428 GALSLGKWVHRIISK-EKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK-NVVSWNA 485
Query: 391 LLAACKNHGNIEVAERVVKEII 412
+++ HG A ++ K+++
Sbjct: 486 MISGYGLHGQGAEALKLYKDML 507
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 193/435 (44%), Gaps = 73/435 (16%)
Query: 49 AASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR 108
A + LL + +L + S+ RLF + P+ F+ N L+R+ S +R
Sbjct: 56 ATALLLRYASLRAPP--SHLLRLFRAFPCPDRFLRNALLRSLPS-------------LRP 100
Query: 109 TGFAPNQHTFTFVLKACSNVRSLN-------CCKQIHTHVSKSGLDLDLHVVNCLVRCYS 161
P+ +F+F A S S + + +H +G D V + L + Y
Sbjct: 101 HLLFPSPDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYF 160
Query: 162 VSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLA 220
S ++AR+VFD + + +W T+++G S EAL F +M+ G P+S TLA
Sbjct: 161 KLSRGDDARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLA 216
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
S L A A++ + +G VH + G + T L+ +Y+K G + A+ LFD M
Sbjct: 217 SSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNP 276
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV-----------LSACCH 329
++ +NA+ISG + +G E +++LF++L PN T V V L+ C H
Sbjct: 277 DLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLH 336
Query: 330 AGFI------------------------DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
A + + R IF +M +E +E + M+ +
Sbjct: 337 AFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAM-----LEKTMESWNAMISGYAQ 391
Query: 366 CGKVLEAE---ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
G A +L++ + +P+ + + L+AC + G + + + V II+ E VY
Sbjct: 392 NGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLG-KWVHRIISKEKLELNVY 450
Query: 423 VV--LSNMYAEAESM 435
V+ L +MYA+ S+
Sbjct: 451 VMTALIDMYAKCGSI 465
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 240/462 (51%), Gaps = 53/462 (11%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
K++ Q K++H I + D F + L+ A + G + A ++FN ++ + WN
Sbjct: 286 KAVPQTKEVHGNAIRNGTFPDVFVGNALID--AYAKCGLMENAVKVFNMMEFKDVVSWNA 343
Query: 86 LIRAQASSLNPDKAIFLYMNMRR-----------------------------------TG 110
++ + S N + A L+ NMR+ +G
Sbjct: 344 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 403
Query: 111 FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS----------GLDLDLHVVNCLVRCY 160
PN T VL AC+++ + + +IH + K+ G D DL V N L+ Y
Sbjct: 404 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 463
Query: 161 SVSSDLNNARQVFDEI--RNRTLNVWTTMISGYAQSFRANEALMLFDQMLME--GFEPNS 216
S AR +FD+I R + WT MI G+AQ +N+AL LF +M+ E G PN+
Sbjct: 464 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 523
Query: 217 VTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGA-ILGTALVHMYTKNGALAKAKALF 274
T++ +L ACA + +G+++H +V + +E A + L+ MY+K G + A+ +F
Sbjct: 524 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 583
Query: 275 DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID 334
DSM +++ +W +M++G HG EALD+F K+ K VP+DITF+ VL AC H G +D
Sbjct: 584 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 643
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G F SM YG+ P+ EHY C +DLL R G++ +A +K M +P V+W ALL+A
Sbjct: 644 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
C+ H N+E+AE + +++ + N G Y ++SN+YA A K
Sbjct: 704 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWK 745
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 200/481 (41%), Gaps = 76/481 (15%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRI---------------QDHFAASRLLAFCALSS---S 62
L +CKS + + QIH Q+I S + + F + R L ++S
Sbjct: 50 LLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLAC 109
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G YA + + WN LIR D AI + M R G P+ T VL
Sbjct: 110 GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVL 169
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC + S C H + +G + ++ + N LV YS L A +FDEI R ++
Sbjct: 170 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 229
Query: 183 ---VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS------VTLASVLSACAQSGCLE 233
W +++S + +S A AL LF +M + E + +++ ++L AC +
Sbjct: 230 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 289
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
++VH G +G AL+ Y K G + A +F+ M +++ +WNAM++G +
Sbjct: 290 QTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYS 349
Query: 294 SHGHAEEALDLFRKLEKEQI-----------------------------------VPNDI 318
G+ E A +LF+ + KE I +PN +
Sbjct: 350 QSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCV 409
Query: 319 TFVGVLSACCHAGFIDVGRQIFG-SMKRVY--------GIEPKIEHYGCMVDLLGRCGKV 369
T + VLSAC G G +I S+K G + + Y ++D+ +C
Sbjct: 410 TIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 469
Query: 370 LEAEELIKRM-VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA----LEPNNHGVYVV 424
A + + + + +VV W ++ +G+ A ++ E+I+ + PN + + +
Sbjct: 470 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 529
Query: 425 L 425
L
Sbjct: 530 L 530
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 236/439 (53%), Gaps = 21/439 (4%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMI---------ISSRIQDHFAASRL 53
L +S Q I L L + +S+ Q Q+HA ++ +S + + ++ ++L
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 54 LAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP 113
F + ++F+ + W+++I A A + P A+ + M G P
Sbjct: 76 PLF-----------SLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRP 124
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ H + KAC +R + K +H K+G D+ V + LV Y+ ++ +AR +F
Sbjct: 125 DDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLF 184
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
DE+ R + W+ MI GYAQ EAL LF Q L+E + N T +SV+ C+ S LE
Sbjct: 185 DEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLE 244
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG+ +H F+ + +G+AL+ +Y+K G + A +FD +P RN+ WN+M+ A
Sbjct: 245 LGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACA 304
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
H H + LF ++ + PN I F+ VL AC HAG ++ GR+ F S+ R YGIEP+
Sbjct: 305 QHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYF-SLMRDYGIEPET 363
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHY +VDLLGR GK+ EA +IK+M +P +WGALL C+ H + E+A V I+
Sbjct: 364 EHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILE 423
Query: 414 LEPNNHGVYVVLSNMYAEA 432
++ ++ G++V+LSN YA A
Sbjct: 424 MDSSSSGLHVLLSNAYAAA 442
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 228/408 (55%), Gaps = 6/408 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLF--NSIQSPNHFMWNTLIR 88
+Q+H + + F + L++ +C G ++ A ++F N S +N LI
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYC---KCGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
++ A +++ M+ TG + + T ++ C+ L + +H K GLD
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++ V+N + Y + R++FDE+ + L W +ISGY+Q+ A + L L++QM
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK 249
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G P+ TL SVLS+CA G ++G +V V+ GF + A + MY + G LA
Sbjct: 250 SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLA 309
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
KA+A+FD MP +++ +W AMI HG E L LF + K I P+ FV VLSAC
Sbjct: 310 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H+G D G ++F +MKR Y +EP EHY C+VDLLGR G++ EA E I+ M +PD +W
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
GALL ACK H N+++AE ++I EPNN G YV++SN+Y+++++ +
Sbjct: 430 GALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQE 477
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 179/348 (51%), Gaps = 6/348 (1%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN +R A ++I LY +M R+G +P+ +F F+LK+C+++ +Q+H HV+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE-IRNRTLNV-WTTMISGYAQSFRANEA 200
K G + + V+ L+ Y + +AR+VF+E ++ L+V + +ISGY + + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+F +M G +SVT+ ++ C L LG +H G + + + + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G++ + LFD MP + + TWNA+ISG + +G A + L+L+ +++ + P+ T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V VLS+C H G +G ++ G + G P + + + RCG + +A + M
Sbjct: 261 VSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
K +V W A++ HG E+ + ++I + P+ +VLS
Sbjct: 320 VK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 227/404 (56%), Gaps = 5/404 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI--QSPNHFMWNTLIRA 89
++IH+Q+ S D + L+ A SG L+ A +F+SI S + T+I A
Sbjct: 373 RKIHSQITASGIDADPIVQNSLINMYA--RSGLLAEAREVFDSILENSKTVVSFTTMIAA 430
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL- 148
A + +P +A+ ++ M G APN+ TF VL AC + L IH + +SGLD
Sbjct: 431 YAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSS 490
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D N LV Y+ DL A +VF+ ++ + L WTT+I+ QS AL L+D+ML
Sbjct: 491 DPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRML 550
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G P+ TL+++L ACA G L +GEK+H E A AL MY K G+L
Sbjct: 551 QSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLE 610
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
KA L+ ++ATW +M++ + G A AL+L+ ++E E + PN++TF+ VL +C
Sbjct: 611 KATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCS 670
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
AG + GR+ F S+ YG +P EH+GCMVD+LGR GK+ +AEEL+ M + PD + W
Sbjct: 671 QAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAW 730
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+LL++CK H + E+ R + ++ L+P + +V LS +YA A
Sbjct: 731 QSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALSQIYAAA 774
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 192/407 (47%), Gaps = 12/407 (2%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ +++HA I+S R+ + L+ F + A LF+++ F WN
Sbjct: 64 RALDHGRRVHAH-IVSRRLARNALLGELV-FQMYARCRCFDTAIALFDAMPDRRPFCWNV 121
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
L++ ++ P + LY M P+ F + + AC ++ L + IH V+ +G
Sbjct: 122 LMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIHYRVA-TG 180
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
++ + + LV Y+ ++ A FD+ R W ++S A + A+ LF
Sbjct: 181 RGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFF 240
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM E + + + A L ACA +G L G ++H ++ ++ AL+ MY + G
Sbjct: 241 QM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCG 298
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L +A +F MP RN+ +W +MI+ +A GH A+ LF + E I PN+ T+ V+S
Sbjct: 299 KLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVS 358
Query: 326 ACCHAG---FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
A H G +D GR+I + GI+ ++++ R G + EA E+ ++
Sbjct: 359 AIAHLGRDAILDRGRKIHSQIT-ASGIDADPIVQNSLINMYARSGLLAEAREVFDSILEN 417
Query: 383 PD-VVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
VV + ++AA ++G+ A + +E+ A + PN VL+
Sbjct: 418 SKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLA 464
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 9/312 (2%)
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ +L+ C N R+L+ +++H H+ L + + + + Y+ + A +FD +
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+R W ++ + + R + L L+ +M +E +P++ + AC + L G
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H V G + + + +ALV MY + G + A A FD E A WNA++S LA GH
Sbjct: 173 IHYRVAT-GRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK-RVYGIEPKIEHY 356
A++LF ++E+ Q +D + L AC AG + G QI ++ ++G ++
Sbjct: 232 HRRAIELFFQMEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGT--RVLVL 287
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--L 414
++ + RCGK+ EA + M + +VV W +++AA G+ A ++ +IA +
Sbjct: 288 NALISMYVRCGKLDEALRVFADMPHR-NVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGI 346
Query: 415 EPNNHGVYVVLS 426
PN V+S
Sbjct: 347 NPNEKTYASVVS 358
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
R ++AL+ D+ L + A++L C L+ G +VH + R A+LG
Sbjct: 31 RLDDALLRLDK-LRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGE 89
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
+ MY + A ALFD+MP+R WN ++ + + L+L+R++ E P
Sbjct: 90 LVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQP 149
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ F+ + AC + GR I + GI I+ +V + +CG++
Sbjct: 150 SACGFMWAIVACGRIKDLAQGRSIHYRVATGRGINSSIQ--SALVTMYAQCGRI 201
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 239/426 (56%), Gaps = 37/426 (8%)
Query: 48 FAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR 107
F ++ L+ A+ G L +A ++F+ + + WNTLI + + + L+ M
Sbjct: 152 FVSNALIHMYAMC--GQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMT 209
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS--- 164
+ T ++ ACS++ + ++ ++ L++D+++ N L+ Y S
Sbjct: 210 AANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAE 269
Query: 165 ----------------------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+L AR++FD + R + WT+MI+GY+Q+ +
Sbjct: 270 LAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQ 329
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTA 256
++A+ LF +M+ +P+ VT+ASVLSACA G L++G VH +++ G + +G +
Sbjct: 330 FSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNS 389
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
L+ MY K G + KA +F M +++ +W ++ISGLA +G A ALDLF ++ +E + P
Sbjct: 390 LIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPT 449
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
TFVG+L AC HAG ++ G + F SM+ V+G+ P ++HYGC+VDLL R G + +A E I
Sbjct: 450 HGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFI 509
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA---- 432
K+M PDVV+W LL+ACK HGN+ +AE K ++ L+P + G YV+LSN YA
Sbjct: 510 KKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWD 569
Query: 433 ESMKMQ 438
++MKM+
Sbjct: 570 DAMKMR 575
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 215/425 (50%), Gaps = 37/425 (8%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K++HA +I + D F S ++ +LSS+ +L A +FN I+ P +WN +IR +
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSST-NLHKAHLVFNQIECPTLVVWNHMIRGLS 92
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S +P +AI +Y M G N T F+ KAC+ V + ++IH H K G + L
Sbjct: 93 QSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLF 152
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y++ L A+++FD + +R L W T+I GY+Q + E L LFD M
Sbjct: 153 VSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAAN 212
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY---------- 261
+ ++VT+ ++ AC+ G E + + ++K E+ LG L+ MY
Sbjct: 213 IKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQ 272
Query: 262 ---------------------TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
K G L A+ LFD+MP+R++ +W +MI+G + +
Sbjct: 273 GVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSD 332
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
A+ LF+++ ++ P+ +T VLSAC H G +DVG + ++R +G++ I ++
Sbjct: 333 AVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQADIYVGNSLI 391
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNN 418
D+ +CG V +A E+ RM K D V W ++++ +G A + +++ ++P
Sbjct: 392 DMYCKCGMVEKALEVFHRMKDK-DSVSWTSVISGLAVNGFANSALDLFSQMLREGVQP-T 449
Query: 419 HGVYV 423
HG +V
Sbjct: 450 HGTFV 454
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 148/286 (51%), Gaps = 3/286 (1%)
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS-DLNNARQVFDEIRNRTL 181
+ N S + K++H H+ ++ L D +++ ++R YS+SS +L+ A VF++I TL
Sbjct: 22 RVSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTL 81
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
VW MI G +QS EA+ ++ +M +G N++TL + ACA+ + G K+HV
Sbjct: 82 VVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVH 141
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
GFE + AL+HMY G L A+ +FD M +R++ +WN +I G + + +E
Sbjct: 142 ALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEV 201
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L LF + I + +T V ++ AC H G + + +K +E + ++D
Sbjct: 202 LRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKE-NNLEIDVYLGNTLID 260
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
+ GR A+ + RM + ++V W AL+ GN+ A ++
Sbjct: 261 MYGRRSLAELAQGVFDRMR-ERNIVSWNALVMGHAKVGNLTAARKL 305
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 207/386 (53%), Gaps = 31/386 (8%)
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
MWN LI S + + +++M R T+ VL AC + L Q+H V
Sbjct: 128 MWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRV 187
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLN-------------------------------NAR 170
+SG+ D V N LV Y+ D++ AR
Sbjct: 188 LESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRAR 247
Query: 171 QVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
+FD + R WT MI GY Q R +AL F M + + T+ SV++ACAQ G
Sbjct: 248 DLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLG 307
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LE GE +++ G +M +G AL+ MY+K G++ +A +F M R+ TW A+I
Sbjct: 308 ALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIIL 367
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
GLA +G EEA+D+F ++ + P+++TFVGVL+AC HAG +D GR+ F SM Y I
Sbjct: 368 GLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNIS 427
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P + HYGC++D+LGR GK+ EA + I +M KP+ +WG LLA+C+ +GN E+ E +
Sbjct: 428 PTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAER 487
Query: 411 IIALEPNNHGVYVVLSNMYAEAESMK 436
++ L+P+N Y++LSNMYA++ K
Sbjct: 488 LLELDPDNSTAYILLSNMYAKSNRWK 513
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 45/360 (12%)
Query: 88 RAQASSLN---PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ-----IHT 139
RA +SS++ ++A+ Y+ M G P+ +TF +LKA + R IH
Sbjct: 21 RAASSSVSGHGAEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHA 80
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN----VWTTMISGYAQSF 195
HV K G++ + H + L+ Y+ D AR V + T +W +ISG+ +S
Sbjct: 81 HVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSG 140
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
R + F M+ +VT SVLSAC + L LG +VH V G +
Sbjct: 141 RFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVEN 200
Query: 256 ALVHMY-------------------------------TKNGALAKAKALFDSMPERNIAT 284
ALV MY ++G + +A+ LFD MPER+
Sbjct: 201 ALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIA 260
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
W AMI G G +AL+ FR ++ ++ ++ T V V++AC G ++ G M
Sbjct: 261 WTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMG 320
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
R+ GI+ + ++D+ +CG + A ++ K M D W A++ +G E A
Sbjct: 321 RL-GIKMDVFVGNALIDMYSKCGSIERALDVFKDM-HNRDKFTWTAIILGLAVNGRGEEA 378
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 6/246 (2%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA--QASSLNPDKAIFLYMNMRRTGFAPNQ 115
L SG + A LF+ + + W +I Q F YM + + ++
Sbjct: 236 GLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKV--RADE 293
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
T V+ AC+ + +L + ++ + G+ +D+ V N L+ YS + A VF +
Sbjct: 294 FTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKD 353
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ NR WT +I G A + R EA+ +F +ML P+ VT VL+AC +G ++ G
Sbjct: 354 MHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKG 413
Query: 236 EKVHV-FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLA 293
+ + + + L+ + + G L +A D MP + N W +++
Sbjct: 414 REFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCR 473
Query: 294 SHGHAE 299
+G++E
Sbjct: 474 VYGNSE 479
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 272/539 (50%), Gaps = 25/539 (4%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
IH+ I + F +++L+ A G L ++F+ + + WN++I+A +
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYA--EFGSLKDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL-DLHV 152
P +AI L+ MR + P+ T + S + + C+ + + G L D+ +
Sbjct: 327 EQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITI 386
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
N +V Y+ +++AR VF+ + N+ + W T+ISGYAQ+ A+EA+ +++ M EG
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGG 446
Query: 213 E--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
E N T SVL AC+Q+G L G K+H + G + +GT+L MY K G L A
Sbjct: 447 EISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDA 506
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+LF +P N WN +I+ HGH E+A+ LF+++ E + P+ ITFV +LSAC H+
Sbjct: 507 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 566
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G +D G F M+ YGI P ++HYGCMVDL GR G++ A IK M +PD +WGA
Sbjct: 567 GLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGA 626
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAG 450
LL+AC+ HGN+++ + + + +EP + G +V+LSNMYA A + EI
Sbjct: 627 LLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI-------RS 679
Query: 451 LASAADILQNPDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQYVTA-SQTIRL-- 507
+ S + + P + S + + V GN T P +E + +TA + +++
Sbjct: 680 ITSGKGLRKTPGWSSMEVD-----NKVEVFYTGNQTHP--MYEEMYRELTALHEKLKMVG 732
Query: 508 --PDNGHAIQLAQDGRINQTFAADGDDLIYILTLTLAPGGQNCSANANLVVSAPDSHGV 564
PD+ +Q +D + + L L P NL V D H V
Sbjct: 733 YVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCG-DCHSV 790
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 186/389 (47%), Gaps = 17/389 (4%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFN 73
I + L C ++ K +HA++++S+ IQ+ +++L+ +C L G+++ A F+
Sbjct: 54 IDDVHTLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYL---GNVALARYTFD 110
Query: 74 SIQSPNHFMWNTLIRAQASSLNPDKAIFLY-MNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
I + + + WN +I + + I + + M +G P+ TF VLKAC NV N
Sbjct: 111 HIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGN 170
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+IH K G D++V L+ Y + NAR +FDE+ R + W MISGY
Sbjct: 171 ---KIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYC 227
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
QS A EAL L D + +SVT+ S+LSAC ++G G +H + G E
Sbjct: 228 QSGNAKEALTLSDGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+ L+ +Y + G+L + +FD M R++ +WN++I + A+ LF+++ +
Sbjct: 284 VSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSR 343
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
I P+ +T + + S G I R + G R I +V + + G V A
Sbjct: 344 IQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 373 EELIKRMVWKP--DVVMWGALLAACKNHG 399
+ W P DV+ W +++ +G
Sbjct: 404 RAVFN---WLPNKDVISWNTIISGYAQNG 429
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 217/390 (55%), Gaps = 42/390 (10%)
Query: 81 FMWNTLIRAQASSL--NP--DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
F+WN LIRA S NP A+ LY+ MR P+ HTF F+L++ + + + +Q
Sbjct: 25 FVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQS---INTPHRGRQ 81
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H + GL D V L+ YS ARQ FDEI L W +I A++
Sbjct: 82 LHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGM 141
Query: 197 ANEALMLFDQM----------LMEGF------------------------EPNSVTLASV 222
+ A LFDQM ++ G+ PN T++SV
Sbjct: 142 IHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSV 201
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM-PERN 281
LSACA+ G L+ G+ VH ++ G ++ +LGT+L+ MY K G++ +AK +FD++ PE++
Sbjct: 202 LSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKD 261
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
+ W+AMI+ + HG +EE L+LF ++ + + PN +TFV VL AC H G + G + F
Sbjct: 262 VMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFK 321
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
M YG+ P I+HYGCMVDL R G++ +A ++K M +PDV++WGALL + HG++
Sbjct: 322 RMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGDV 381
Query: 402 EVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
E E + +++ L+P N YV+LSN+YA+
Sbjct: 382 ETCEIAITKLLELDPANSSAYVLLSNVYAK 411
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 144/307 (46%), Gaps = 37/307 (12%)
Query: 29 HQLKQIHAQMIISSRIQDHFAASRLL--------------AFCALS-------------- 60
H+ +Q+HAQ+++ D F + L+ AF ++
Sbjct: 77 HRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHAN 136
Query: 61 -SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR---TGFAPNQH 116
+G + A +LF+ + N W+ +I S A+ L+ +++ + PN+
Sbjct: 137 AKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEF 196
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T + VL AC+ + +L K +H ++ K+G+ +D+ + L+ Y+ + A+ +FD +
Sbjct: 197 TMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNL 256
Query: 177 -RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ + W+ MI+ ++ + E L LF +M+ +G PN+VT +VL AC G + G
Sbjct: 257 GPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEG 316
Query: 236 EKVHVFVKMRGFEMGAILGT--ALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGL 292
+ + M + + ++ +V +Y++ G + A + SMP E ++ W A+++G
Sbjct: 317 NE-YFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGA 375
Query: 293 ASHGHAE 299
HG E
Sbjct: 376 RIHGDVE 382
>gi|302759747|ref|XP_002963296.1| hypothetical protein SELMODRAFT_80365 [Selaginella moellendorffii]
gi|300168564|gb|EFJ35167.1| hypothetical protein SELMODRAFT_80365 [Selaginella moellendorffii]
Length = 325
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/316 (41%), Positives = 191/316 (60%), Gaps = 4/316 (1%)
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T L ACSN+++L ++IH +S SG+ D + LV YS + L AR F
Sbjct: 2 TLVNALGACSNLKALEEGRKIHARLSSSGIQSDFSA-SALVNMYSRAGSLEEARDAFRSR 60
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+NR WT M++ YAQ ++AL L+ +M +EG P+ VT A+VL ACA G L G
Sbjct: 61 KNRNAICWTAMLAAYAQHGHNHDALRLYKEMDLEGLRPDDVTHAAVLGACACLGALAEGR 120
Query: 237 KVH--VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
+VH + + +LGTA V+MY K G + +AK FD + ++++ W AM+ A
Sbjct: 121 RVHRRILSTRSSSGLDVVLGTATVNMYAKCGRVDEAKLAFDGISDKSVFCWTAMVGAYAR 180
Query: 295 HGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+GH E+A++LFR++ E + +PND+TF VL+AC HAG +D G+ F M +VYGI P
Sbjct: 181 NGHGEKAVELFREMVESSRTLPNDVTFTTVLNACSHAGLVDEGKYFFALMDKVYGIAPSG 240
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGCM+DLLGR G++ EAE +I M + D + W LL ACK HG+I RV ++ +
Sbjct: 241 EHYGCMIDLLGRAGRLEEAERMITGMPFPADKISWETLLGACKLHGDIGRGARVAEQALR 300
Query: 414 LEPNNHGVYVVLSNMY 429
++P N YV+LS++Y
Sbjct: 301 MDPENAANYVILSDLY 316
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 19/310 (6%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
K++ + ++IHA+ + SS IQ F+AS L+ S +G L A F S ++ N W
Sbjct: 14 KALEEGRKIHAR-LSSSGIQSDFSASALVNM--YSRAGSLEEARDAFRSRKNRNAICWTA 70
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV---- 141
++ A A + A+ LY M G P+ T VL AC+ + +L +++H +
Sbjct: 71 MLAAYAQHGHNHDALRLYKEMDLEGLRPDDVTHAAVLGACACLGALAEGRRVHRRILSTR 130
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
S SGLD+ L V Y+ ++ A+ FD I ++++ WT M+ YA++ +A+
Sbjct: 131 SSSGLDVVLGTAT--VNMYAKCGRVDEAKLAFDGISDKSVFCWTAMVGAYARNGHGEKAV 188
Query: 202 MLFDQMLMEGFE-PNSVTLASVLSACAQSGCLELGEKVHVFV-KMRGFEMGAILGTALVH 259
LF +M+ PN VT +VL+AC+ +G ++ G+ + K+ G ++
Sbjct: 189 ELFREMVESSRTLPNDVTFTTVLNACSHAGLVDEGKYFFALMDKVYGIAPSGEHYGCMID 248
Query: 260 MYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGH-------AEEALDLFRKLEKE 311
+ + G L +A+ + MP + +W ++ HG AE+AL + +
Sbjct: 249 LLGRAGRLEEAERMITGMPFPADKISWETLLGACKLHGDIGRGARVAEQALRMDPENAAN 308
Query: 312 QIVPNDITFV 321
++ +D+ F
Sbjct: 309 YVILSDLYFA 318
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+TL + L AC+ LE G K+H + G + +ALV+MY++ G+L +A+ F S
Sbjct: 1 MTLVNALGACSNLKALEEGRKIHARLSSSGIQ-SDFSASALVNMYSRAGSLEEARDAFRS 59
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
RN W AM++ A HGH +AL L+++++ E + P+D+T VL AC G + G
Sbjct: 60 RKNRNAICWTAMLAAYAQHGHNHDALRLYKEMDLEGLRPDDVTHAAVLGACACLGALAEG 119
Query: 337 RQIFG---SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
R++ S + G++ + V++ +CG+V EA +L + V W A++
Sbjct: 120 RRVHRRILSTRSSSGLDVVLGT--ATVNMYAKCGRVDEA-KLAFDGISDKSVFCWTAMVG 176
Query: 394 ACKNHGNIEVAERVVKEII 412
A +G+ E A + +E++
Sbjct: 177 AYARNGHGEKAVELFREMV 195
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 201/330 (60%), Gaps = 11/330 (3%)
Query: 108 RTGFAPNQHTFTFVLK---ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
R G A + H +++ +C V S V D D+ N ++ Y S
Sbjct: 97 RAGLASDAHVSASLIQTYFSCGRVASARS-------VFDQTTDKDIFCWNVMISGYVKSG 149
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM-LMEGFEPNSVTLASVL 223
+L AR++FD + R + WTT+I YAQ + EA+ +F +M + EG EP+ V L SVL
Sbjct: 150 NLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVL 209
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SAC G ++LGE VH FV RG L A++ MY K G + KA +F+ M ++++
Sbjct: 210 SACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVV 269
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
TW +I+G A HG EA+++FR++E E + PND+TF+ +LSAC H G D+GR F M
Sbjct: 270 TWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFKIM 329
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
Y I+ ++EHYGCMVDLLGR G ++EA++L++ M +K + +WGALLAA + HG+ E+
Sbjct: 330 VSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDAEL 389
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
++ + +I LEP+N G Y++LSN+YAE E
Sbjct: 390 GKQALLHLIELEPHNSGNYILLSNIYAEQE 419
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 13/247 (5%)
Query: 61 SSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFT 119
SG+L+ A LF+ + + N W T+I A A P +A+ ++ M+ G P+
Sbjct: 147 KSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALL 206
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
VL AC ++ +++ + +H V + GL + ++N ++ Y + A +VF+ + +
Sbjct: 207 SVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQK 266
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE--- 236
++ WTT+I+G+A EA+ +F +M ME PN VT ++LSAC+ G +LG
Sbjct: 267 SVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYF 326
Query: 237 KVHV---FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGL 292
K+ V +K R G +V + + G L +A+ L MP + N A W A+++
Sbjct: 327 KIMVSQYRIKQRVEHYG-----CMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAA 381
Query: 293 ASHGHAE 299
+HG AE
Sbjct: 382 RTHGDAE 388
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG ++H + G A + +L+ Y G +A A+++FD +++I WN MISG
Sbjct: 87 LGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYV 146
Query: 294 SHGHAE-------------------------------EALDLFRKLEKEQ-IVPNDITFV 321
G+ EA+++FR+++ E+ I P+ + +
Sbjct: 147 KSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALL 206
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
VLSAC G +D+G + + R G+ +I ++D+ + G V +A E+ + M
Sbjct: 207 SVLSACGDLGAVDLGEWVHRFVVR-RGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQ 265
Query: 382 KPDVVMWGALLAACKNHG----NIEVAERVVKEIIALEPNNHGVYVVLS 426
K VV W ++A HG IE+ R+ E +A PN+ +LS
Sbjct: 266 K-SVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVA--PNDVTFLAILS 311
>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
Length = 685
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 229/410 (55%), Gaps = 39/410 (9%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S +G + A LF+ I + W T+I D+A+ Y M R G P++
Sbjct: 250 SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMV 309
Query: 120 FVLKACSNVRSLNCCK--QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN---------- 167
+L A + RS+ K Q+H + K G D + ++ Y+VS+D+
Sbjct: 310 DLLSA--SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASV 367
Query: 168 ---------------------NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
AR+VFD+ ++ + W MISGYAQS AL LF +
Sbjct: 368 KDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 207 MLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
M+ +P+++T+ SV SA + G LE G++ H ++ L A++ MY K G
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 266 ALAKAKALF---DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
++ A +F ++ I+ WNA+I G A+HGHA+ ALDL+ L+ I PN ITFVG
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSACCHAG +++G+ F SMK +GIEP I+HYGCMVDLLG+ G++ EA+E+IK+M K
Sbjct: 548 VLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVK 607
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
DV++WG LL+A + HGN+E+AE E+ A++P++ G V+LSN+YA+A
Sbjct: 608 ADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADA 657
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 189/426 (44%), Gaps = 68/426 (15%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A +LF+ + + + TLI+ A + +A+ L+ MR G N+ T V+ ACS+
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + C+ + + K L+ + V L+ Y + L +AR++FDE+ R L W M
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 188 ISGYAQS----------------------------FRAN---EALMLFDQMLMEGFEPNS 216
++GY+++ R N EAL+ + +ML G +P+
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY--------------- 261
V + +LSA A+S G ++H + RGF+ L ++H Y
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 262 ----------------TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
KNG + +A+ +FD +++I +WNAMISG A + AL LF
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 306 RKL-EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
R++ Q+ P+ IT V V SA G ++ G++ + I P ++D+
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN-FSTIPPNDNLTAAIIDMYA 484
Query: 365 RCGKVLEAEELIKRM--VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL--EPNNHG 420
+CG + A + + + + W A++ HG+ ++A + ++ +L +PN+
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSIT 544
Query: 421 VYVVLS 426
VLS
Sbjct: 545 FVGVLS 550
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 47/287 (16%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD------------------------ 147
+ + L +C++ + C +QIH V KSGLD
Sbjct: 38 SDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAES 97
Query: 148 -------LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
LD N +V Y S L +A ++FD + R+ +TT+I GYAQ+ + +EA
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCL---ELGEKVHVFVKMRGFEMGAILGTAL 257
+ LF +M G N VTLA+V+SAC+ G + + + + + +K+ G + T L
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEG---RVFVSTNL 214
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+HMY L A+ LFD MPERN+ TWN M++G + G E+A +LF +QI D
Sbjct: 215 LHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELF-----DQITEKD 269
Query: 318 ITFVG-VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
I G ++ C +D + M R G++P MVDLL
Sbjct: 270 IVSWGTMIDGCLRKNQLDEALVYYTEMLRC-GMKPS---EVMMVDLL 312
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 44 IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY 103
++DH A SR +G + A +F+ + F WN +I A SL+P A+ L+
Sbjct: 367 VKDHIA-SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 104 MNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVR 158
M + P+ T V A S++ SL K+ H +++ S + +L +++ +
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAK 485
Query: 159 CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVT 218
C S+ + LN Q I + T++ W +I G A A AL L+ + +PNS+T
Sbjct: 486 CGSIETALNIFHQT-KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSIT 544
Query: 219 LASVLSACAQSGCLELGEKVHVFVKM-RGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
VLSAC +G +ELG+ +K G E +V + K G L +AK + M
Sbjct: 545 FVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKM 604
Query: 278 PER-NIATWNAMISGLASHGHAE 299
P + ++ W ++S +HG+ E
Sbjct: 605 PVKADVMIWGMLLSASRTHGNVE 627
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA------ 272
L S L +CA S + G ++H V G + + ++++MY K LA A++
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 273 -------------------------LFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
LFD MPER+ ++ +I G A + EA++LFR+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ I+ N++T V+SAC H G I R + S+ +E ++ ++ + C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCR-MLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ +A +L M + ++V W +L G IE AE + +I
Sbjct: 223 CLKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQI 265
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 234/403 (58%), Gaps = 5/403 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+H +I S F + ++ S S +S A +F+S+++ N WN++I +
Sbjct: 214 QVHTMVIKSGLDSTIFVGNSMVNM--YSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVT 271
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+ +A L+ MR G Q F V+K C+N++ ++ KQ+H V K+G D DL++
Sbjct: 272 NGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNI 331
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRN-RTLNVWTTMISGYAQSFRANEALMLFDQMLME- 210
L+ YS S++++A ++F + + + WT +ISGY Q+ R + A+ LF QM E
Sbjct: 332 KTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREE 391
Query: 211 GFEPNSVTLASVLSACAQ-SGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
G EPN T +SVL+ACA + +E G++ H GF + +ALV MY K G +
Sbjct: 392 GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIES 451
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A +F +R++ +WN+MISG A HG +++L +F ++ + + + ITF+GV+SAC H
Sbjct: 452 ANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTH 511
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
AG ++ G++ F M + Y I P +EHY CMVDL R G + +A +LI +M + +W
Sbjct: 512 AGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 571
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LLAAC+ H N+++ E +++I+L+P + YV+LSN+YA A
Sbjct: 572 TLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATA 614
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 176/342 (51%), Gaps = 4/342 (1%)
Query: 98 KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV 157
+A+ L++ +RR+G + + + VLK C + KQ+H K G D+ V LV
Sbjct: 75 EALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLV 134
Query: 158 RCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
Y + + + +VFDE+R + + WT++++GY Q+ +AL LF QM +EG +PN
Sbjct: 135 DMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPF 194
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T A+VL A G +E G +VH V G + +G ++V+MY+K+ ++ AKA+FDSM
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
RN +WN+MI+G ++G EA +LF ++ E + F V+ C + + +
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAK 314
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
Q+ + + G + + ++ +C ++ +A +L M +VV W A+++
Sbjct: 315 QLHCQVIK-NGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQ 373
Query: 398 HGNIEVAERV---VKEIIALEPNNHGVYVVLSNMYAEAESMK 436
+G + A + ++ +EPN VL+ A S++
Sbjct: 374 NGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVE 415
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 212/375 (56%), Gaps = 5/375 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRA--QASSLNPD---KAIFLYMNMRRTGFAPNQHT 117
GDL AT++F + PN M+N +I Q ++ + +A++L+ M+ G P++ T
Sbjct: 193 GDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFT 252
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F+ +LKACS + + C KQIH + K L D + N LV YS+S + + + F
Sbjct: 253 FSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 312
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ WT++I G+ Q+ + L LF ++L G +P+ T++ +LSACA ++ GE+
Sbjct: 313 KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 372
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H + G I+ + + MY K G + A F +I +W+ MIS A HG
Sbjct: 373 IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGC 432
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A+EA+DLF ++ I PN ITF+GVL AC H G ++ G + F MK+ +GI P ++H
Sbjct: 433 AKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSA 492
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
C+VDLLGR G++ EAE I ++ D VMW +LL+AC+ H + +RV + +I LEP
Sbjct: 493 CIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPE 552
Query: 418 NHGVYVVLSNMYAEA 432
YV+L N+Y +A
Sbjct: 553 AAASYVLLYNIYNDA 567
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 160/353 (45%), Gaps = 11/353 (3%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN+LI + + L+ R + ++ TF+ L C L + IH ++
Sbjct: 9 WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
SGL + + N L+ Y ++ AR VF+ W ++I+GY + +E L
Sbjct: 69 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQ--SGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L +ML G NS L S L AC S +E G+ +H G ++ ++GTAL+
Sbjct: 129 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDT 188
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGL-----ASHGHAEEALDLFRKLEKEQIVP 315
Y K G L A +F MP+ N+ +NAMI+G + A EA+ LF +++ + P
Sbjct: 189 YAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKP 248
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
++ TF +L AC + G+QI + + Y ++ +V+L G + + +
Sbjct: 249 SEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIGNALVELYSLSGSIEDGLKC 307
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
K DVV W +L+ +G E + E++ +P+ + ++LS
Sbjct: 308 FHSTP-KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIHAQ+ + D F + L+ +LS G + + F+S + W +LI
Sbjct: 270 KQIHAQIFKYNLQSDEFIGNALVELYSLS--GSIEDGLKCFHSTPKLDVVSWTSLIVGHV 327
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + + L+ + +G P++ T + +L AC+N+ ++ +QIH + K+G+
Sbjct: 328 QNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI 387
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ N + Y+ D+++A F E +N + W+ MIS AQ A EA+ LF+ M G
Sbjct: 388 IQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSG 447
Query: 212 FEPNSVTLASVLSACAQSGCLELGEK-VHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
PN +T VL AC+ G +E G + + K G +V + + G LA+A
Sbjct: 448 IAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEA 507
Query: 271 KA-LFDSMPERNIATWNAMISGLASH 295
++ + DS E + W +++S H
Sbjct: 508 ESFIMDSGFEGDPVMWRSLLSACRVH 533
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 4/219 (1%)
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R + W ++ISGY Q +E + LF + M + T ++ LS C ++ L LG
Sbjct: 3 KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H + + G +L +L+ MY K G + A+ +F+S E + +WN++I+G G
Sbjct: 63 IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACC--HAGFIDVGRQIFGSMKRVYGIEPKIEH 355
+E L L K+ + + N L AC + I+ G+ + G ++ G++ +
Sbjct: 123 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL-GLDLDVVV 181
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++D + G + +A ++ K M P+VVM+ A++A
Sbjct: 182 GTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 219
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
MP+RN+ +WN++ISG G E ++LF++ + + TF LS C + +G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
R I ++ V G+ + ++D+ +CG++ + L+ + D V W +L+A
Sbjct: 61 RLIH-ALITVSGLGGPVLLTNSLIDMYCKCGRI-DWARLVFESADELDSVSWNSLIAGYV 118
Query: 397 NHG-NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
G N E+ +VK + HG+ + N YA ++K
Sbjct: 119 RIGSNDEMLRLLVKML------RHGLNL---NSYALGSALK 150
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 217/387 (56%), Gaps = 42/387 (10%)
Query: 44 IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY 103
I+D FA + +++ +G L ATR+F + N WN +I S +KA L+
Sbjct: 274 IRDVFAWTAMVS--GFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF 331
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
M P+++T ++ N +V Y+
Sbjct: 332 DQM------PSRNTSSW---------------------------------NTMVTGYAQC 352
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
+++ A+ +FDE+ R W MISGYAQS ++ EAL LF +M +G N LA L
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACAL 412
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
S+CA+ LELG+++H + GF+ G I G AL+ MY K G++ +A +F+ + E++I
Sbjct: 413 SSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIV 472
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN MI+G A HG +EAL LF + K I P+D+T VGVLSAC H GF+D G + F SM
Sbjct: 473 SWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSM 531
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ YGI +HY CM+DLLGR G++ EA L+K M + PD WGALL A + HG+ E+
Sbjct: 532 YQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTEL 591
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYA 430
E+ +++ +EP+N G+YV+LSN+YA
Sbjct: 592 GEKAAEKVFEMEPDNSGMYVLLSNLYA 618
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 156/349 (44%), Gaps = 49/349 (14%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN I A + A+ ++ MRR T+ ++ + +C +++ +
Sbjct: 63 WNRKISAYMRKGQCESALSVFNGMRRRSTV----TYNAMISGYLSNNKFDCARKVFEKMP 118
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
D DL N ++ Y + +L+ AR +F+++ + + W M+SG+AQ+ EA
Sbjct: 119 ----DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK----------VHVFVKMRGFEMGAI 252
+FDQML++ N ++ +LSA Q+G +E + V M G+
Sbjct: 175 IFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKR 230
Query: 253 LGTA-----------------LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
L A ++ Y +NG L++A+ LF+ +P R++ W AM+SG +
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
G +EA +F ++ ++ N++++ +++ + I+ R++F M
Sbjct: 291 GMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQMP-----SRNTSS 341
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ MV +CG + +A+ L M + D + W A+++ G E A
Sbjct: 342 WNTMVTGYAQCGNIDQAKILFDEMP-QRDCISWAAMISGYAQSGQSEEA 389
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 18/228 (7%)
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W IS Y + + AL +F+ M ++VT +++S + + KV F K
Sbjct: 63 WNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCARKV--FEK 116
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
M ++ I ++ Y KNG L+ A+ALF+ MPE+++ +WNAM+SG A +G EEA
Sbjct: 117 MPDRDL--ISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEA-- 172
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
RK+ + +V N+I++ G+LSA G I+ R++F S ++ +I + C++
Sbjct: 173 --RKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSK-----MDWEIVSWNCLMGGY 225
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
R ++ +A L RM + D + W ++ +G + A R+ +E+
Sbjct: 226 VRKKRLDDARSLFDRMPVR-DKISWNIMITGYAQNGLLSEARRLFEEL 272
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
++ + +I WN IS G E AL +F + + V T+ ++S D
Sbjct: 54 TIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTV----TYNAMISGYLSNNKFDC 109
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
R++F M + + + M+ + G + A L +M + DVV W A+L+
Sbjct: 110 ARKVFEKMP-----DRDLISWNVMLSGYVKNGNLSAARALFNQMP-EKDVVSWNAMLSGF 163
Query: 396 KNHGNIEVAERVVKEII 412
+G +E A ++ +++
Sbjct: 164 AQNGFVEEARKIFDQML 180
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 225/431 (52%), Gaps = 18/431 (4%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
S D+ A LF I+ P+ +N LI + + + A+ + + +G + T
Sbjct: 249 FSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTM 308
Query: 119 TFVLKACSNVRSLN--CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
++ S L+ CC I KSG L V L YS ++++ ARQ+FDE
Sbjct: 309 VGLIPVSSPFGHLHLACC--IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDES 366
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+T+ W MISGYAQS A+ LF +M+ F PN VT+ S+LSACAQ G L G+
Sbjct: 367 SEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGK 426
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
VH +K + E + TAL+ MY K G +++A LFD E+N TWN MI G HG
Sbjct: 427 SVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHG 486
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+ +EAL LF ++ P+ +TF+ VL AC HAG + G +IF +M Y IEP EHY
Sbjct: 487 YGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHY 546
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
CMVD+LGR G++ +A E I++M +P +WG LL AC H + +A + + L+P
Sbjct: 547 ACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDP 606
Query: 417 NNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNLTPNRS 475
N G YV+LSN+Y+ V+ F AS + ++ + ++P L
Sbjct: 607 GNVGYYVLLSNIYS-------------VERNFPKAASVREAVKKRNLSKTPGCTLIEVNG 653
Query: 476 TPFVLLNGNNT 486
TP V + G+ +
Sbjct: 654 TPHVFVCGDRS 664
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 192/400 (48%), Gaps = 11/400 (2%)
Query: 34 IHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
+HA ++ + F AS L+ +C S ++YA ++F+ + + +WNT+I
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSR---VAYARKVFDKMPDRDTVLWNTMITGLVR 181
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+ D ++ ++ +M G + T VL A + ++ + I K G D +V
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ L+ +S D++ AR +F IR L + +ISG++ + A+ F ++L+ G
Sbjct: 242 LTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQ 301
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+S T+ ++ + G L L + F G + + TAL +Y++ + A+
Sbjct: 302 RVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQ 361
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
LFD E+ +A WNAMISG A G E A+ LF+++ + PN +T +LSAC G
Sbjct: 362 LFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGA 421
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G+ + +K +E I ++D+ +CG + EA +L + + + V W ++
Sbjct: 422 LSFGKSVHQLIKS-KNLEQNIYVSTALIDMYAKCGNISEASQLFD-LTSEKNTVTWNTMI 479
Query: 393 AACKNHGNIEVAERVVKEIIAL--EPNNHGVYVVLSNMYA 430
HG + A ++ E++ L +P++ LS +YA
Sbjct: 480 FGYGLHGYGDEALKLFNEMLHLGFQPSS---VTFLSVLYA 516
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 132/280 (47%), Gaps = 11/280 (3%)
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+ H + ++G DL V L + +AR +F + + ++ +I G+ SF
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGF--SF 83
Query: 196 RANEALMLFDQMLMEG--FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ + + F L++ P++ T A +SA LG +H + GF+ +
Sbjct: 84 SPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDN---LGMCLHAHAVVDGFDSNLFV 140
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
+ALV +Y K +A A+ +FD MP+R+ WN MI+GL + ++++ +F+ + + +
Sbjct: 141 ASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGV 200
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ T VL A + VG I ++K + + + ++ + +C V +
Sbjct: 201 RLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV--LTGLISVFSKCEDV-DT 257
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
L+ M+ KPD+V + AL++ +G E A + +E++
Sbjct: 258 ARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELL 297
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 246/434 (56%), Gaps = 5/434 (1%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLK-QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYA 68
QP PL LL KS+ Q I+AQ+ D F + L+ A ++SG + A
Sbjct: 105 QPDKHTFPL-LLKTFSKSIAQNPFMIYAQIFKLGFDLDLFIGNALIP--AFANSGFVESA 161
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
++F+ + W LI + P +A+ ++ MR + + T +L+A + V
Sbjct: 162 RQVFDESPFQDTVAWTALINGYVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRAAALV 221
Query: 129 RSLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + +H ++G + LD +V + L+ Y +A +VF+E+ +R + WT +
Sbjct: 222 GDADFGRWVHGFYVEAGRVQLDGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVL 281
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
++GY QS + +AL F ML + PN TL+SVLSACAQ G L+ G VH +++
Sbjct: 282 VAGYVQSNKFQDALRAFWDMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYIECNKI 341
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
M LGTALV MY K G++ +A +F++MP +N+ TW +I+GLA HG A AL++F
Sbjct: 342 NMNVTLGTALVDMYAKCGSIDEALRVFENMPVKNVYTWTVIINGLAVHGDALGALNIFCC 401
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ K I PN++TFVGVL+AC H GF++ G+++F MK Y ++P+++HYGCMVD+LGR G
Sbjct: 402 MLKSGIQPNEVTFVGVLAACSHGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRAG 461
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
+ +A+++I M KP + GAL AC H E+ E + ++ +PN+ G Y +L+N
Sbjct: 462 YLEDAKQIIDNMPMKPSPGVLGALFGACLVHKAFEMGEHIGNLLVNQQPNHSGSYALLAN 521
Query: 428 MYAEAESMKMQLEI 441
+Y ++ + ++
Sbjct: 522 LYKMCQNWEAAAQV 535
>gi|218200771|gb|EEC83198.1| hypothetical protein OsI_28453 [Oryza sativa Indica Group]
Length = 639
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 189/353 (53%), Gaps = 50/353 (14%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK------ACSNVRSLNCCKQI 137
N LIRA A S P A+ LY ++ R G P HT +LK A R L +
Sbjct: 42 NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLAL--GV 99
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H H K GL +G+ +
Sbjct: 100 HAHAVKLGL------------------------------------------AGFLLAGDG 117
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EAL LF +M +G P+ L VL ACAQ G LE G+ VH ++K + LGTAL
Sbjct: 118 REALGLFARMQADGVIPDDTVLVGVLVACAQLGVLEQGKWVHGYLKANNIRITVFLGTAL 177
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G + A +F M E+N+ W MI GLA HG EAL+LF ++E+ + P+D
Sbjct: 178 VDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDD 237
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
I F+G L AC H G +D GR++F SM R YGI+PKIEHYGCMVDLL R G + EA E+++
Sbjct: 238 IAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVE 297
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+M KPD ++WGAL+A C+ H N+E+AE VVK I LEP+ G YV+L N+YA
Sbjct: 298 KMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYA 350
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 240/442 (54%), Gaps = 40/442 (9%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M++ Q+H+ + S + D + S L+ S G+++ A R+F+ + N WN+LI
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDM--YSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG-L 146
+ +A+ ++ M + P++ T V+ AC+++ ++ +++H V K+ L
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDE--IRN-------------------------- 178
D+ + N V Y+ S + AR +FD IRN
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK 345
Query: 179 ---RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
R + W +I+GY Q+ EAL LF + E P + A++L ACA L LG
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 236 EKVHVFVKMRGFEMGA------ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
+ HV V GF+ + +G +L+ MY K G + + +F M ER+ +WNAMI
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
G A +G+ EAL+LFR++ + P+ IT +GVLSAC HAGF++ GR F SM R +G+
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
P +HY CMVDLLGR G + EA+ +I+ M +PD V+WG+LLAACK H NI + + V +
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 585
Query: 410 EIIALEPNNHGVYVVLSNMYAE 431
+++ +EP+N G YV+LSNMYAE
Sbjct: 586 KLLEVEPSNSGPYVLLSNMYAE 607
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 197/392 (50%), Gaps = 38/392 (9%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
L+ G L A LF S+ + WN+++ A ++A+ + M + GF N+++
Sbjct: 95 GLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYS 154
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F VL ACS + +N Q+H+ ++KS D+++ + LV YS ++N+A++VFDE+
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+R + W ++I+ + Q+ A EAL +F ML EP+ VTLASV+SACA +++G++
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 238 VH-VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP------------------ 278
VH VK IL A V MY K + +A+ +FDSMP
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 279 -------------ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
ERN+ +WNA+I+G +G EEAL LF L++E + P +F +L
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 326 ACCHAGFIDVGRQ-----IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
AC + +G Q + K G E I ++D+ +CG V E + ++M+
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ D V W A++ +G A + +E++
Sbjct: 455 -ERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 136/276 (49%), Gaps = 31/276 (11%)
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT-------- 186
+ +H V KSG ++ + N L+ YS L + RQVFD++ R + W +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 187 -----------------------MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
M+SG+AQ R EAL F M EGF N + ASVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SAC+ + G +VH + F +G+ALV MY+K G + A+ +FD M +RN+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN++I+ +G A EALD+F+ + + ++ P+++T V+SAC I VG+++ G +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
+ + I VD+ +C ++ EA + M
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 138/283 (48%), Gaps = 20/283 (7%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRL-FNSIQSPNHFM 82
KC + + + I M I + I A + +++ A+++S + A RL F + N
Sbjct: 301 KCSRIKEARFIFDSMPIRNVI----AETSMISGYAMAAS---TKAARLMFTKMAERNVVS 353
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN LI + ++A+ L+ ++R P ++F +LKAC+++ L+ Q H HV
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 143 KSGLDL------DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
K G D+ V N L+ Y + VF ++ R W MI G+AQ+
Sbjct: 414 KHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGY 473
Query: 197 ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM-RGFEMGAILG- 254
NEAL LF +ML G +P+ +T+ VLSAC +G +E G H F M R F + +
Sbjct: 474 GNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFSSMTRDFGVAPLRDH 531
Query: 255 -TALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASH 295
T +V + + G L +AK++ + MP + + W ++++ H
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 89/201 (44%), Gaps = 37/201 (18%)
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
GF ++ A ++ G LE G +V F KM + ++V TK G L +A
Sbjct: 50 GFSNEIFIQNRLIDAYSKCGSLEDGRQV--FDKMP--QRNIYTWNSVVTGLTKLGFLDEA 105
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+LF SMPER+ TWN+M+SG A H EEAL F + KE V N+ +F VLSAC +
Sbjct: 106 DSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC--S 163
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G D+ + + + LI + + DV + A
Sbjct: 164 GLNDMNKGV-------------------------------QVHSLIAKSPFLSDVYIGSA 192
Query: 391 LLAACKNHGNIEVAERVVKEI 411
L+ GN+ A+RV E+
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEM 213
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 214/371 (57%), Gaps = 1/371 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRR-TGFAPNQHTFTFV 121
G L A +LF+ + ++F WN I + P +A+ L+ M+R + N+ T +
Sbjct: 167 GRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSA 226
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL 181
L A + + L K+IH ++ ++ L+LD V + L+ Y L+ AR +FD++++R +
Sbjct: 227 LAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDV 286
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
WTTMI + R E +LF ++ G PN T A VL+ACA LG++VH +
Sbjct: 287 VSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGY 346
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ G++ G+ +ALVHMY+K G A+ +F+ M + ++ +W ++I G A +G +EA
Sbjct: 347 MMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEA 406
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L F L + P+ +T+VGVLSAC HAG +D G + F S+K +G+ +HY C++D
Sbjct: 407 LHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 466
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LL R G+ EAE +I M KPD +W +LL C+ HGN+E+A+R K + +EP N
Sbjct: 467 LLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPAT 526
Query: 422 YVVLSNMYAEA 432
Y+ L+N+YA A
Sbjct: 527 YITLANIYANA 537
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 152/331 (45%), Gaps = 34/331 (10%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG-----------LDL------ 148
+ RT P+ ++ ++ AC R+L +++H H S LD+
Sbjct: 78 LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGS 137
Query: 149 --------------DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
DL N ++ Y+ L AR++FDE+ R W ISGY
Sbjct: 138 LVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTH 197
Query: 195 FRANEALMLFDQM-LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
+ EAL LF M E N TL+S L+A A CL LG+++H ++ + ++
Sbjct: 198 NQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVV 257
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
+AL+ +Y K G+L +A+ +FD M +R++ +W MI G EE LFR L + +
Sbjct: 258 WSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGV 317
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN+ TF GVL+AC +G+++ G M G +P +V + +CG A
Sbjct: 318 RPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA-GYDPGSFAISALVHMYSKCGNTRVAR 376
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ M +PD+V W +L+ +G + A
Sbjct: 377 RVFNEM-HQPDLVSWTSLIVGYAQNGQPDEA 406
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 43/281 (15%)
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
N + + Q R EA+ L + P++ +++++AC + LELG +VH
Sbjct: 56 NKFEEAVDVLCQQKRVKEAVELLHRT---DHRPSARVYSTLIAACVRHRALELGRRVHAH 112
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALA-------------------------------KA 270
K F G + L+ MY K G+L +A
Sbjct: 113 TKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQA 172
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFVGVLSACCH 329
+ LFD MP+R+ +WNA ISG +H EAL+LFR +++ E+ N T L+A
Sbjct: 173 RKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAA 232
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEH--YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
+ +G++I G + R E ++ + ++DL G+CG + EA + +M + DVV
Sbjct: 233 IPCLRLGKEIHGYLIRT---ELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDR-DVVS 288
Query: 388 WGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
W ++ C G E + ++++ + PN + VL+
Sbjct: 289 WTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLN 329
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 37/210 (17%)
Query: 29 HQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
H K++H M+ + FA S L+ S G+ A R+FN + P+ W +LI
Sbjct: 338 HLGKEVHGYMMHAGYDPGSFAISALVHM--YSKCGNTRVARRVFNEMHQPDLVSWTSLIV 395
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN-CCKQIHTHVSKSGLD 147
A + PD+A+ + + ++G P+Q T+ VL AC++ ++ + H+ K GL
Sbjct: 396 GYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGL- 454
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+H T + + +I A+S R EA + D M
Sbjct: 455 --MH----------------------------TADHYACVIDLLARSGRFKEAENIIDNM 484
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ +P+ AS+L C G LEL ++
Sbjct: 485 PV---KPDKFLWASLLGGCRIHGNLELAKR 511
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/365 (38%), Positives = 209/365 (57%), Gaps = 35/365 (9%)
Query: 103 YMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSV 162
Y M G + T FVLK+C+++ + + +H + GL+ D +V L+ Y
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVK 154
Query: 163 SSDLNNARQVFDEI-------------------------------RNRTLNVWTTMISGY 191
+ +AR++FD++ +R + WT MISGY
Sbjct: 155 CGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGY 214
Query: 192 AQSFRANEALMLFDQMLMEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
Q+ A +AL LFD+ML +G E PN VT+ SVL ACAQS LE G ++H F G +
Sbjct: 215 TQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHL 274
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPE--RNIATWNAMISGLASHGHAEEALDLFRK 307
+ + TAL MY K +L +A+ FD + + +N+ WN MI+ ASHG EA+ +F
Sbjct: 275 NSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFEN 334
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ + + P+ +TF+G+LS C H+G ID G F M ++ +EP++EHY C+VDLLGR G
Sbjct: 335 MLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAG 394
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
+++EA+ELI +M + +WGALLAAC++H N+E+AE + + LEP+N G YV+LSN
Sbjct: 395 RLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSN 454
Query: 428 MYAEA 432
+YAEA
Sbjct: 455 LYAEA 459
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 12/291 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + +++ +MI+ +D + + L+A G++ A LF ++ N W
Sbjct: 154 KCGVIGDARKLFDKMIV----RDMASWNALIA--GYMKEGEIGVAEDLFERMEHRNIVSW 207
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
+I + ++A+ L+ M + G PN T VL AC+ +L ++IH
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFA 267
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI--RNRTLNVWTTMISGYAQSFRANE 199
+ GL L+ V L Y+ L AR FD I + L W TMI+ YA E
Sbjct: 268 NGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVE 327
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKMRGFEMGAILGTALV 258
A+ +F+ ML G +P++VT +LS C+ SG ++ G + + E +V
Sbjct: 328 AVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVV 387
Query: 259 HMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKL 308
+ + G L +AK L MP + + W A+++ SH + E A R+L
Sbjct: 388 DLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRL 438
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L+ + ++ ++ ++ T VL +C + +GR + G RV G+E ++D
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRV-GLEGDFYVGASLID 150
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ +CG + +A +L +M+ + D+ W AL+A G I VAE + + +
Sbjct: 151 MYVKCGVIGDARKLFDKMIVR-DMASWNALIAGYMKEGEIGVAEDLFERM 199
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 219/398 (55%), Gaps = 2/398 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+H I I D F ++ L+ S G + A L + + WN ++
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDL--YSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
S KA+ + M G ++ T +KA + +L KQI + K G + DL V
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ ++ Y D+ NA ++F EI WTTMISGY ++ + AL ++ M + G
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ T A+++ A + LE G+++H V + + +GT+LV MY K G++ A
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYR 1256
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F M R + WNAM+ GLA HGH +EAL+LFR ++ I P+ +TF+GVLSAC H+G
Sbjct: 1257 VFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGL 1316
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ F +M + YGI P+IEHY C+VD LGR G++ EAE +I M +K M+ ALL
Sbjct: 1317 FSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALL 1376
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
AC+ G+ E A+RV +++AL+P++ YV+LSN+YA
Sbjct: 1377 GACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYA 1414
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 181/383 (47%), Gaps = 21/383 (5%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP--NHFMWNTLIRA 89
+QIHA +I SS ++ L+ S +G + A + F I SP + WNT+I +
Sbjct: 914 EQIHALVIKSSFAPVVPVSNSLMNM--YSKAGVVYAAEKTF--INSPELDLISWNTMISS 969
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS---LNCCKQIHTHVSKSGL 146
A + +AI + ++ R G P+Q T VL+ACS Q+H + K G+
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D V L+ YS ++ A + + L W ++ GY +S ++ +AL F
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089
Query: 207 MLMEGFEPNSVTLASVLSACAQSGC---LELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
M G + +TLA+ + A SGC L+ G+++ + GF + + ++ MY K
Sbjct: 1090 MHEMGIPIDEITLATAIKA---SGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G + A LF + + W MISG +G + AL ++ + + P++ TF +
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATL 1206
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY--GCMVDLLGRCGKVLEAEELIKRMVW 381
+ A ++ G+QI + V ++ ++H+ +VD+ +CG V +A + ++M
Sbjct: 1207 IKASSCLTALEQGKQIHAN---VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263
Query: 382 KPDVVMWGALLAACKNHGNIEVA 404
+ VV W A+L HG+++ A
Sbjct: 1264 RK-VVFWNAMLLGLAQHGHVDEA 1285
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 168/359 (46%), Gaps = 7/359 (1%)
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+YA ++F Q N F WN + + AI + + R+ + T +L A
Sbjct: 845 AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
L+ +QIH V KS + V N L+ YS + + A + F L W
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA---QSGCLELGEKVHVFV 242
TMIS YAQ+ EA+ F +L +G +P+ TLASVL AC+ + LG +VHV+
Sbjct: 965 TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYA 1024
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + + TAL+ +Y+K G + +A+ L + ++A+WNA++ G + +AL
Sbjct: 1025 IKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKAL 1084
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ F + + I ++IT + A + G+QI ++ G + ++D+
Sbjct: 1085 EHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKL-GFNNDLWVSSGVLDM 1143
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV--VKEIIALEPNNH 419
+CG + A EL + +PD V W +++ +G+ + A V + + ++P+ +
Sbjct: 1144 YIKCGDMPNALELFGE-ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEY 1201
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
L K+ H + SG D ++ N L+ YS L +ARQVFD+ +R L W ++++
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 191 YAQSFRAN-----EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
YAQ ++ E LF + GF +TLA +L C SG +++ E VH +
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
GFE+ + ALV++Y K G + +A+ LFD MPER+ WN M+ + +EAL F
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 306 RKLEKEQIVPN 316
+ P+
Sbjct: 807 SAFHRSGFFPD 817
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A LF+ + + +WN +++A + D+A+ + R+GF P+ V+
Sbjct: 766 GLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVI 825
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
++ S N ++ H V+ Y A ++F + +
Sbjct: 826 GGVNSDVSNN--RKRHAEQ---------------VKAY--------AMKMFPFDQGSNIF 860
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W ++ + + + A+ F +L +SVTL +LSA + L+LGE++H V
Sbjct: 861 AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALV 920
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
F + +L++MY+K G + A+ F + PE ++ +WN MIS A + EA+
Sbjct: 921 IKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAI 980
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYG---- 357
FR L ++ + P+ T VL AC D G GS VY I+ I +
Sbjct: 981 CTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVST 1037
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++DL + GK+ EAE L+ + D+ W A++
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGK-YDFDLASWNAIM 1071
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 46/374 (12%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+ HA+++ S + D + + L+ S G L A ++F+ + WN+++ A A
Sbjct: 631 KRAHARIVTSGDLPDRYLTNNLITM--YSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 92 -----SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
S N + L+ +R GF+ + T +LK C + + +H + K G
Sbjct: 689 QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+LDL V LV Y + AR +FD++ R +W M+ Y ++ +EAL F
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 207 MLMEGFEPNSVTLASVLSAC---AQSGCLELGEKVHVF-VKMRGFEMGAILGTALVHMYT 262
GF P+ L V+ + E+V + +KM F+ G+
Sbjct: 809 FHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS----------- 857
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
NI WN ++ G A+D F+ L + I + +T V
Sbjct: 858 ------------------NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+LSA A +D+G QI + + P + ++++ + G V AE K +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNMYSKAGVVYAAE---KTFINS 955
Query: 383 P--DVVMWGALLAA 394
P D++ W ++++
Sbjct: 956 PELDLISWNTMISS 969
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L+LG++ H + G L L+ MY+K G+L A+ +FD +R++ TWN++++
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 292 LA-----SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
A S+ + E LF L + +T +L C +GF+ V + G ++
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G E + G +V++ + G V +A L +M + D V+W +L A
Sbjct: 747 -GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
++ Q KQIHA ++ DHF + L+ +C S D A R+F + WN
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQD---AYRVFRKMDVRKVVFWNA 1271
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS- 144
++ A + D+A+ L+ M+ G P++ TF VL ACS+ + + + K+
Sbjct: 1272 MLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTY 1331
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQV 172
G+ ++ +CLV + + A V
Sbjct: 1332 GITPEIEHYSCLVDALGRAGRIQEAENV 1359
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 218/403 (54%), Gaps = 36/403 (8%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV--L 122
+ A +F I + W TLI + A+ Y+ M N H V +
Sbjct: 226 IDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGE-VGANDHEVLLVDLM 284
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS------------SD----- 165
KAC+ ++ +Q+HT + K+G D V LV Y SD
Sbjct: 285 KACARYSAITEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMAFKLSDKSHTA 344
Query: 166 --------------LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
++ AR++FD++ R W+TMISGY Q+ R++ AL LF ML
Sbjct: 345 SWNALLAALLRKGLIHEARELFDDMPERDTVSWSTMISGYVQTGRSDMALELFYSMLNTS 404
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EPN VTLAS LSA A SG L+ G+ +H + R ++ L L+ MY K G++A A
Sbjct: 405 VEPNEVTLASALSAIADSGTLDQGKWIHDHIMNRPIQLTDNLSAGLIDMYAKRGSVADAV 464
Query: 272 ALFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
F+ ++ +++ WNAMI LA HG+A +LDLF +L++ I PN ITF+GVLSACCH
Sbjct: 465 QFFNCASDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCH 524
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
G + G+ F +M R YGI+P I+HYGCMVDLLGR G + EAE+L+ M K DVV+WG
Sbjct: 525 TGMVAKGKYYFEAMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKADVVIWG 584
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
++L+A + GNI + E+ +E+ L+ + V LSN+YA+A
Sbjct: 585 SILSAARAQGNIALGEKAAEELAKLDQTHGASKVALSNIYADA 627
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 186/446 (41%), Gaps = 71/446 (15%)
Query: 50 ASRLLAFCALSSSGDLSYATRLFNSIQSPNH--FMWNTLIRAQASSLNPDKAIFLYMNMR 107
A+R AL+ +G L A RL + + + + TL+ A A + + +A+ ++ M
Sbjct: 77 AARNSVLAALTRAGHLDRAQRLLDEMPRVHRDAVSYTTLVTALARAGHAGRAVAVFRGML 136
Query: 108 RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLN 167
PN+ T + A + + IH K LD + V LV Y+ +L
Sbjct: 137 SENVVPNEVTLAGAIMAFARCGAPATVGMIHGFALKRALDGFVIVATNLVHAYAGVLELY 196
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQS----------FRANE------------------ 199
+AR +FD + +R W M++GY ++ +R E
Sbjct: 197 SARAMFDGMTHRNAVTWNAMLNGYVKAEMIDMAAEVFWRIPERDEVSWLTLIDGYICADL 256
Query: 200 ---ALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
A+ + QM+ E G + V L ++ ACA+ + G+++H + GF+ A +
Sbjct: 257 ISDAMKAYVQMVGEVGANDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFDAHAFVQA 316
Query: 256 ALVHMY-------------------------------TKNGALAKAKALFDSMPERNIAT 284
LVH Y + G + +A+ LFD MPER+ +
Sbjct: 317 TLVHFYGCCGLIGLAQMAFKLSDKSHTASWNALLAALLRKGLIHEARELFDDMPERDTVS 376
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS-M 343
W+ MISG G ++ AL+LF + + PN++T LSA +G +D G+ I M
Sbjct: 377 WSTMISGYVQTGRSDMALELFYSMLNTSVEPNEVTLASALSAIADSGTLDQGKWIHDHIM 436
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK-PDVVMWGALLAACKNHGNIE 402
R + + ++D+ + G V +A + K V W A++ + HG
Sbjct: 437 NRPIQLTDNLS--AGLIDMYAKRGSVADAVQFFNCASDKFSSVSPWNAMICSLAIHGYAH 494
Query: 403 VAERVVKEI--IALEPNNHGVYVVLS 426
++ + ++ +++PN+ VLS
Sbjct: 495 MSLDLFSQLQRTSIKPNSITFIGVLS 520
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 8/282 (2%)
Query: 36 AQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLN 95
AQM + H A+ L AL G + A LF+ + + W+T+I +
Sbjct: 331 AQMAFKLSDKSHTASWNAL-LAALLRKGLIHEARELFDDMPERDTVSWSTMISGYVQTGR 389
Query: 96 PDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC 155
D A+ L+ +M T PN+ T L A ++ +L+ K IH H+ + L ++
Sbjct: 390 SDMALELFYSMLNTSVEPNEVTLASALSAIADSGTLDQGKWIHDHIMNRPIQLTDNLSAG 449
Query: 156 LVRCYSVSSDLNNARQVFDEIRNR--TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
L+ Y+ + +A Q F+ ++ +++ W MI A A+ +L LF Q+ +
Sbjct: 450 LIDMYAKRGSVADAVQFFNCASDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIK 509
Query: 214 PNSVTLASVLSACAQSGCLELGE-KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PNS+T VLSAC +G + G+ + G + +V + + G L +A+
Sbjct: 510 PNSITFIGVLSACCHTGMVAKGKYYFEAMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQ 569
Query: 273 LFDSMPER-NIATWNAMISGLASHGH---AEEALDLFRKLEK 310
L MP + ++ W +++S + G+ E+A + KL++
Sbjct: 570 LVSMMPMKADVVIWGSILSAARAQGNIALGEKAAEELAKLDQ 611
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 219/398 (55%), Gaps = 2/398 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+H I I D F ++ L+ S G + A L + + WN ++
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDL--YSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
S KA+ + M G ++ T +KA + +L KQI + K G + DL V
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ ++ Y D+ NA ++F EI WTTMISGY ++ + AL ++ M + G
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ T A+++ A + LE G+++H V + + +GT+LV MY K G++ A
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYR 1256
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F M R + WNAM+ GLA HGH +EAL+LFR ++ I P+ +TF+GVLSAC H+G
Sbjct: 1257 VFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGL 1316
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ F +M + YGI P+IEHY C+VD LGR G++ EAE +I M +K M+ ALL
Sbjct: 1317 FSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALL 1376
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
AC+ G+ E A+RV +++AL+P++ YV+LSN+YA
Sbjct: 1377 GACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYA 1414
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 181/383 (47%), Gaps = 21/383 (5%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP--NHFMWNTLIRA 89
+QIHA +I SS ++ L+ S +G + A + F I SP + WNT+I +
Sbjct: 914 EQIHALVIKSSFAPVVPVSNSLMNM--YSKAGVVYAAEKTF--INSPELDLISWNTMISS 969
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS---LNCCKQIHTHVSKSGL 146
A + +AI + ++ R G P+Q T VL+ACS Q+H + K G+
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D V L+ YS ++ A + + L W ++ GY +S ++ +AL F
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089
Query: 207 MLMEGFEPNSVTLASVLSACAQSGC---LELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
M G + +TLA+ + A SGC L+ G+++ + GF + + ++ MY K
Sbjct: 1090 MHEMGIPIDEITLATAIKA---SGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIK 1146
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
G + A LF + + W MISG +G + AL ++ + + P++ TF +
Sbjct: 1147 CGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATL 1206
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY--GCMVDLLGRCGKVLEAEELIKRMVW 381
+ A ++ G+QI + V ++ ++H+ +VD+ +CG V +A + ++M
Sbjct: 1207 IKASSCLTALEQGKQIHAN---VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263
Query: 382 KPDVVMWGALLAACKNHGNIEVA 404
+ VV W A+L HG+++ A
Sbjct: 1264 RK-VVFWNAMLLGLAQHGHVDEA 1285
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 168/359 (46%), Gaps = 7/359 (1%)
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+YA ++F Q N F WN + + AI + + R+ + T +L A
Sbjct: 845 AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
L+ +QIH V KS + V N L+ YS + + A + F L W
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA---QSGCLELGEKVHVFV 242
TMIS YAQ+ EA+ F +L +G +P+ TLASVL AC+ + LG +VHV+
Sbjct: 965 TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYA 1024
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + + TAL+ +Y+K G + +A+ L + ++A+WNA++ G + +AL
Sbjct: 1025 IKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKAL 1084
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ F + + I ++IT + A + G+QI ++ G + ++D+
Sbjct: 1085 EHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKL-GFNNDLWVSSGVLDM 1143
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV--VKEIIALEPNNH 419
+CG + A EL + +PD V W +++ +G+ + A V + + ++P+ +
Sbjct: 1144 YIKCGDMPNALELFGE-ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEY 1201
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
L K+ H + SG D ++ N L+ YS L +ARQVFD+ +R L W ++++
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 191 YAQSFRAN-----EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
YAQ ++ E LF + GF +TLA +L C SG +++ E VH +
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
GFE+ + ALV++Y K G + +A+ LFD MPER+ WN M+ + +EAL F
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 306 RKLEKEQIVPN 316
+ P+
Sbjct: 807 SAFHRSGFXPD 817
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + A LF+ + + +WN +++A + D+A+ + R+GF P+ V+
Sbjct: 766 GLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVI 825
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
++ S N ++ H V+ Y A ++F + +
Sbjct: 826 GGVNSDVSNN--RKRHAEQ---------------VKAY--------AMKMFPFDQGSNIF 860
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W ++ + + + A+ F +L +SVTL +LSA + L+LGE++H V
Sbjct: 861 AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALV 920
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
F + +L++MY+K G + A+ F + PE ++ +WN MIS A + EA+
Sbjct: 921 IKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAI 980
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYG---- 357
FR L ++ + P+ T VL AC D G GS VY I+ I +
Sbjct: 981 CTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVST 1037
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
++DL + GK+ EAE L+ + D+ W A++
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGK-YDFDLASWNAIM 1071
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 46/374 (12%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+ HA+++ S + D + + L+ S G L A ++F+ + WN+++ A A
Sbjct: 631 KRAHARIVTSGDLPDRYLTNNLITM--YSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 92 -----SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
S N + L+ +R GF+ + T +LK C + + +H + K G
Sbjct: 689 QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
+LDL V LV Y + AR +FD++ R +W M+ Y ++ +EAL F
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 207 MLMEGFEPNSVTLASVLSAC---AQSGCLELGEKVHVF-VKMRGFEMGAILGTALVHMYT 262
GF P+ L V+ + E+V + +KM F+ G+
Sbjct: 809 FHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGS----------- 857
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
NI WN ++ G A+D F+ L + I + +T V
Sbjct: 858 ------------------NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+LSA A +D+G QI + + P + ++++ + G V AE K +
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNMYSKAGVVYAAE---KTFINS 955
Query: 383 P--DVVMWGALLAA 394
P D++ W ++++
Sbjct: 956 PELDLISWNTMISS 969
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L+LG++ H + G L L+ MY+K G+L A+ +FD +R++ TWN++++
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 292 LA-----SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
A S+ + E LF L + +T +L C +GF+ V + G ++
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G E + G +V++ + G V +A L +M + D V+W +L A
Sbjct: 747 -GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
++ Q KQIHA ++ DHF + L+ +C S D A R+F + WN
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQD---AYRVFRKMDVRKVVFWNA 1271
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS- 144
++ A + D+A+ L+ M+ G P++ TF VL ACS+ + + + K+
Sbjct: 1272 MLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTY 1331
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQV 172
G+ ++ +CLV + + A V
Sbjct: 1332 GITPEIEHYSCLVDALGRAGRIQEAENV 1359
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 212/375 (56%), Gaps = 5/375 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRA--QASSLNPD---KAIFLYMNMRRTGFAPNQHT 117
GDL AT++F + PN M+N +I Q ++ + +A++L+ M+ G P++ T
Sbjct: 272 GDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFT 331
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F+ +LKACS + + C KQIH + K L D + N LV YS+S + + + F
Sbjct: 332 FSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 391
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
+ WT++I G+ Q+ + L LF ++L G +P+ T++ +LSACA ++ GE+
Sbjct: 392 KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 451
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+H + G I+ + + MY K G + A F +I +W+ MIS A HG
Sbjct: 452 IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGC 511
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A+EA+DLF ++ I PN ITF+GVL AC H G ++ G + F MK+ +GI P ++H
Sbjct: 512 AKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSA 571
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
C+VDLLGR G++ EAE I ++ D VMW +LL+AC+ H + +RV + +I LEP
Sbjct: 572 CIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPE 631
Query: 418 NHGVYVVLSNMYAEA 432
YV+L N+Y +A
Sbjct: 632 AAASYVLLYNIYNDA 646
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 169/373 (45%), Gaps = 11/373 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+ A +LF+ + N WN+LI + + L+ R + ++ TF+ L
Sbjct: 68 GETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNAL 127
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
C L + IH ++ SGL + + N L+ Y ++ AR VF+
Sbjct: 128 SVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSV 187
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ--SGCLELGEKVHV 240
W ++I+GY + +E L L +ML G NS L S L AC S +E G+ +H
Sbjct: 188 SWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHG 247
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL-----ASH 295
G ++ ++GTAL+ Y K G L A +F MP+ N+ +NAMI+G +
Sbjct: 248 CAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMAD 307
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
A EA+ LF +++ + P++ TF +L AC + G+QI + + Y ++
Sbjct: 308 EFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFI 366
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--A 413
+V+L G + + + K DVV W +L+ +G E + E++
Sbjct: 367 GNALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSG 425
Query: 414 LEPNNHGVYVVLS 426
+P+ + ++LS
Sbjct: 426 RKPDEFTISIMLS 438
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA 169
G + T+T +++ + SL K H H+ K+ L ++N L+ Y + + A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
+++FD + R + W ++ISGY Q +E + LF + M + T ++ LS C ++
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
L LG +H + + G +L +L+ MY K G + A+ +F+S E + +WN++I
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC--HAGFIDVGRQIFGSMKRVY 347
+G G +E L L K+ + + N L AC + I+ G+ + G ++
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL- 252
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
G++ + ++D + G + +A ++ K M P+VVM+ A++A
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 298
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIHAQ+ + D F + L+ +LS G + + F+S + W +LI
Sbjct: 349 KQIHAQIFKYNLQSDEFIGNALVELYSLS--GSIEDGLKCFHSTPKLDVVSWTSLIVGHV 406
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + + L+ + +G P++ T + +L AC+N+ ++ +QIH + K+G+
Sbjct: 407 QNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI 466
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ N + Y+ D+++A F E +N + W+ MIS AQ A EA+ LF+ M G
Sbjct: 467 IQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSG 526
Query: 212 FEPNSVTLASVLSACAQSGCLELGEK-VHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
PN +T VL AC+ G +E G + + K G +V + + G LA+A
Sbjct: 527 IAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEA 586
Query: 271 KA-LFDSMPERNIATWNAMISGLASH 295
++ + DS E + W +++S H
Sbjct: 587 ESFIMDSGFEGDPVMWRSLLSACRVH 612
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G +SVT ++ ++G L G+ H+ + F+ L L++MY K G A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
K LFD MP+RN+ +WN++ISG G E ++LF++ + + TF LS C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+ +GR I ++ V G+ + ++D+ +CG++ + L+ + D V W +
Sbjct: 134 LDLRLGRLIH-ALITVSGLGGPVLLTNSLIDMYCKCGRI-DWARLVFESADELDSVSWNS 191
Query: 391 LLAACKNHG-NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
L+A G N E+ +VK + HG+ + N YA ++K
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKML------RHGLNL---NSYALGSALK 229
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 239/410 (58%), Gaps = 2/410 (0%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L K K + Q K HAQ+++ D ++ L+ S G + +A ++F+ + S +
Sbjct: 73 LCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINM--YSKCGSVDFARQVFDEMPSRSL 130
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
WNT+I + + ++A+ L + M+R G ++ T + VL AC+ +L+ C+ +H
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
K+ +DL++ V L+ Y+ + +A VF+ + +R++ W++M +GY Q+ +A
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
L LF + G + + ++SV+ ACA + G++++ + GF + ++L+ M
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDM 310
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G + ++ +F + +RN+ WNAMISGL+ H + E + LF K+++ + PND+TF
Sbjct: 311 YAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTF 370
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V VLSAC H G + G++ F M + + + P + HY CMVD L R G++ EA +LI ++
Sbjct: 371 VSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLP 430
Query: 381 WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+ MWG+LLA+C+ HGN+E+AE K++ +EP+N G Y++LSNMYA
Sbjct: 431 FNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYA 480
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 4/308 (1%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+LK C+ + L K H + GL DL N L+ YS ++ ARQVFDE+ +R+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
L W TMI Q+ NEAL L QM EG + T++SVL ACA L + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
F ++ + TAL+ +Y K G + A +F+SMP+R++ TW++M +G + E+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL LFRK + + + V+ AC + G+Q+ + + G I ++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKS-GFCSNIFVASSLI 308
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAERVVK-EIIALEPNN 418
D+ +CG + E+ ++ R V K +VV+W A+++ H ++EV K + + L PN+
Sbjct: 309 DMYAKCGGIEESYKVF-RDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367
Query: 419 HGVYVVLS 426
VLS
Sbjct: 368 VTFVSVLS 375
>gi|147833477|emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
Length = 596
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 222/412 (53%), Gaps = 15/412 (3%)
Query: 27 SMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
S+ Q ++ + I R++ D + A L+ + G L A ++F + N +W
Sbjct: 76 SLFQGAKLFHSLAIKLRLEGDPYVAPALMN--VYTELGSLEEAHKVFEEVPLKNSVIWGV 133
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I+ + L+ MRR+GF + +++AC NV + K H SG
Sbjct: 134 MIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLYFSSG 193
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
Y V L+ A +F+ I R + VW+ +I+G+A++ RA E++ +F
Sbjct: 194 Y------------VYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFARNGRALESISMFR 241
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QML + PNSVT AS++ AC+ G L+ G VH ++ G E+ T+ + MY K G
Sbjct: 242 QMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCG 301
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ A +F +PE+N+ +W+ MI+G HG EAL+LF ++ +PN +TFV VLS
Sbjct: 302 CIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLS 361
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC H+G I+ G F SM R YGI P EHY CMVDLLGR GK+ EA I M +P
Sbjct: 362 ACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGA 421
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKM 437
WGALL AC+ H E+AE V K+++ LE + GVYV+LSN+YA+ +M
Sbjct: 422 SAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEM 473
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 157/346 (45%), Gaps = 14/346 (4%)
Query: 54 LAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP 113
+ F A G L A++ FN I N WNT++ + + + + L+ M + G
Sbjct: 1 MIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLV 60
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ F +KAC + K H+ K L+ D +V L+ Y+ L A +VF
Sbjct: 61 DSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVF 120
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
+E+ + +W MI GY LF +M GFE + + ++ AC +
Sbjct: 121 EEVPLKNSVIWGVMIKGYLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGK 180
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
G+ H G+ +Y G L A LF+ + RB+ W+A+I+G A
Sbjct: 181 EGKTFHGLYFSSGY------------VYEVRGFLDXALXLFEXIXYRBVVVWSAIIAGFA 228
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
+G A E++ +FR++ + + PN +TF ++ AC G + GR + G M R G+E +
Sbjct: 229 RNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIR-NGVELDV 287
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
++Y +D+ +CG ++ A + ++ K +V W ++ HG
Sbjct: 288 KNYTSFIDMYAKCGCIVTAYRVFCQIPEK-NVFSWSTMINGFGMHG 332
>gi|28558786|gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo subsp. melo]
Length = 565
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 238/422 (56%), Gaps = 13/422 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ +H +++ + D + +S LL S GDL+ ++F I N W +LI
Sbjct: 125 QSVHNRIVKTGFELDVYTSSCLLNMYV--SCGDLNSGLKVFEFIPKWNVVAWTSLIAGFV 182
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD---- 147
++ P +A+ L+ +M G PN+ T T L A + R ++ K + + + GLD
Sbjct: 183 NNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRLRQLGLDPFHT 242
Query: 148 ---LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
++ + ++ Y+ L AR +FD++ R L VW +MIS ++Q R EAL LF
Sbjct: 243 NSRFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQYGRGAEALRLF 302
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
M + GF PN T SV+ AC G+ +H V F +GTAL+ MY K+
Sbjct: 303 VDMELAGFVPNKATFLSVIRACTHLRFRSTGQSLHARVLKANFHEFVAIGTALMDMYAKS 362
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGV 323
G A +F + ++++ W MISGLA G +EAL++FR++E+E ++ P+ IT++ V
Sbjct: 363 GDADTALKIFSKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEEEAEVAPDQITYIAV 422
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC H G ++ G++ F SM VYGIEP +EHYGCM+DLL R G EAEEL+ +M +P
Sbjct: 423 LWACSHLGLVEEGQKHFTSMMEVYGIEPTMEHYGCMIDLLSRAGHSEEAEELLVKMPTQP 482
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA---ESMKMQLE 440
+ + ++L C+ +GN+ +A RV I+ L+ ++ GVYV+LSN++A+A E MK+ +
Sbjct: 483 NATILSSILNGCEMYGNVGLANRVKSHIVELKNSSSGVYVLLSNIHAKACNWEEMKLARD 542
Query: 441 IL 442
IL
Sbjct: 543 IL 544
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 217/401 (54%), Gaps = 10/401 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LS L +KCK+M +LKQIH+ MI +S +++ SRL+ FCA S GD+ YA +F+
Sbjct: 9 LSFL-EKCKTMKELKQIHSLMIKTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQTDQ 67
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
++WN++I+ + + A+F+Y M+R GF P+ TF FVLK CS + L + +
Sbjct: 68 LTVYVWNSMIKGYCNGGDKFGALFMYEEMQRKGFYPDHFTFPFVLKVCSAIDLLVYGQSV 127
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H + K+G +LD++ +CL+ Y DLN+ +VF+ I + WT++I+G+ + +
Sbjct: 128 HNRIVKTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGFVNNDQP 187
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE-------MG 250
EAL LF M EG EPN +T+ + L+A A+ + G+ V ++ G +
Sbjct: 188 KEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRLRQLGLDPFHTNSRFN 247
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
IL TA++ MY K G L A+ LFD MP+RN+ WN+MIS + +G EAL LF +E
Sbjct: 248 VILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQYGRGAEALRLFVDMEL 307
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
VPN TF+ V+ AC H F G+ + + + + ++D+ + G
Sbjct: 308 AGFVPNKATFLSVIRACTHLRFRSTGQSLHARVLKA-NFHEFVAIGTALMDMYAKSGDAD 366
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
A ++ ++ K DV+ W +++ G + A V + +
Sbjct: 367 TALKIFSKLR-KKDVMAWTTMISGLAIQGKGKEALNVFRRM 406
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 233/435 (53%), Gaps = 32/435 (7%)
Query: 30 QLKQIHAQMIISSRIQ-DHFAASRLLAFCAL---SSSGDLSYATRLFNSIQSPNHFMWNT 85
+L +H II IQ F +L + + G + A +F+ ++ N W+
Sbjct: 271 KLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSA 330
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I A KA+ L+ M +G P++ T +L AC N R+L +Q+H S G
Sbjct: 331 MIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHG 390
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ---------SFR 196
+ +L V N LV YS L++A +FD + R W+ M+ G+A+ +FR
Sbjct: 391 MLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFR 450
Query: 197 -------------------ANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
ANE+L+LFD+M EG P+ V + +V+ ACA+ G +
Sbjct: 451 ELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKART 510
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+ +++ + F++ ILGTA++ M+ K G + A+ +FD M E+N+ +W+AMI+ HG
Sbjct: 511 IDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ 570
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+ALDLF + + I+PN IT V +L AC HAG ++ G + F M Y + ++HY
Sbjct: 571 GRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYT 630
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
C+VDLLGR G++ EA +LI+ M + D +WGA L AC+ H ++ +AE+ ++ L+P
Sbjct: 631 CVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQ 690
Query: 418 NHGVYVVLSNMYAEA 432
N G Y++LSN+YA A
Sbjct: 691 NPGHYILLSNIYANA 705
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 174/315 (55%), Gaps = 23/315 (7%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C+++ Q++Q+HAQ + +++ A++L+ F + + D +Y LF+ + + W+
Sbjct: 91 CRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG--LFDGMCVRDSVSWS 148
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
++ A + + + R G P+ +T FV++AC ++++L
Sbjct: 149 VMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ------------ 196
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
+ +V+ V+C ++ +AR +FD+++ R L WT MI GYA+ +ANE+L+LF
Sbjct: 197 -----MALVDMYVKC----REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 247
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
++M EG P+ V + +V+ ACA+ G + + +++ + F++ ILGTA++ MY K
Sbjct: 248 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 307
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + A+ +FD M E+N+ +W+AMI+ HG +ALDLFR + ++P+ IT +L
Sbjct: 308 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 367
Query: 325 SACCHAGFIDVGRQI 339
AC + + RQ+
Sbjct: 368 YACINCRNLTQVRQV 382
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 167/361 (46%), Gaps = 30/361 (8%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF+ +Q + W +I A ++++ L+ MR G P++ V+ AC+
Sbjct: 212 ARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAK 271
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ +++ + I ++ + LD+ + ++ Y+ + +AR++FD + + + W+ M
Sbjct: 272 LGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAM 331
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I+ Y + +AL LF ML G P+ +TLAS+L AC L +VH + G
Sbjct: 332 IAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGM 391
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS------------- 294
I+ LVH Y+ AL A LFD M R+ +W+ M+ G A
Sbjct: 392 LQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRE 451
Query: 295 ---------------HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
G+A E+L LF K+ +E +VP+ + V V+ AC G + R I
Sbjct: 452 LIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI 511
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
++R + + M+D+ +CG V A E+ RM K +V+ W A++AA HG
Sbjct: 512 DDYIQR-KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYHG 569
Query: 400 N 400
Sbjct: 570 Q 570
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 23/281 (8%)
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
F + A N R+L +Q+H S G+ ++ V N L+ YS L++A +FD + R
Sbjct: 83 FYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 142
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W+ M+ G+A+ F +++ G P++ TL V+ AC L++
Sbjct: 143 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM----- 197
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
ALV MY K + A+ LFD M ER++ TW MI G A G A
Sbjct: 198 ----------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 241
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
E+L LF K+ +E +VP+ + V V+ AC G + R I ++R + + M
Sbjct: 242 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR-KKFQLDVILGTAM 300
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+D+ +CG V A E+ RM K +V+ W A++AA HG
Sbjct: 301 IDMYAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYHGQ 340
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 142/302 (47%), Gaps = 34/302 (11%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C+++ Q++Q+HAQ + +Q+ A++L+ F + + D +Y LF+ + + W+
Sbjct: 373 CRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYG--LFDGMCVRDSVSWS 430
Query: 85 T--------------------LIRAQAS--------SLNPDKAIFLYMNMRRTGFAPNQH 116
LIR A N ++++ L+ MR G P++
Sbjct: 431 VMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKV 490
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
V+ AC+ + +++ + I ++ + LD+ + ++ ++ + +AR++FD +
Sbjct: 491 AMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM 550
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+ + W+ MI+ Y + +AL LF ML G PN +TL S+L AC+ +G +E G
Sbjct: 551 EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 610
Query: 237 KVHVFVKMRGFEMGAILG--TALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLA 293
+ + + + A + T +V + + G L +A L +SM E++ W A +
Sbjct: 611 RFFSLM-WEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACR 669
Query: 294 SH 295
+H
Sbjct: 670 TH 671
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 231/407 (56%), Gaps = 4/407 (0%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ Q K+IH ++ D F S L+ D+ A ++F + + + +
Sbjct: 189 SLKQGKEIHGYILRHGIALDVFLKSALIDI--YFKCRDVGMACKIFKQSTNVDIVVCTAI 246
Query: 87 IRAQA-SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
I + LN D A+ ++ + +PN T VL AC+ + +LN K++H ++ K G
Sbjct: 247 ISGYVLNGLNND-ALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
LD HV + ++ Y+ L+ A Q+F + + W +I+ +Q+ + EA+ LF
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFR 365
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM EG + V++++ LSACA L G+ +H F+ F+ +AL+ MY K G
Sbjct: 366 QMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCG 425
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L+ A+ +FD M E+N +WN++I+ SHGH E +L LF K+ ++ I P+ +TF+ +LS
Sbjct: 426 NLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
AC HAG +D G Q F M YGI ++EHY C+VDL GR G++ EA E IK M + PD
Sbjct: 486 ACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDD 545
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG LL AC+ HGN+E+AE + ++ L+P N G YV+LSN++A+A
Sbjct: 546 GVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADA 592
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 210/396 (53%), Gaps = 6/396 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+H +I D A+ L+A S G LS A +LFN++ N WN +I
Sbjct: 94 QLHGLVISCGFHFDPLVANALVAM--YSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQ 151
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+ D+A L+ M G +P+ TF L + + SL K+IH ++ + G+ LD+ +
Sbjct: 152 NGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFL 211
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+ L+ Y D+ A ++F + N + V T +ISGY + N+AL +F +L E
Sbjct: 212 KSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKM 271
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN+VTLASVL ACA L LG+++H + G + +G+A++ MY K G L A
Sbjct: 272 SPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQ 331
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+F MPE++ WNA+I+ + +G +EA+DLFR++ +E + + ++ LSAC +
Sbjct: 332 IFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPA 391
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G+ I M + + ++ ++D+ G+CG L + M+ + + V W +++
Sbjct: 392 LHHGKAIHSFMIK-GAFDSEVFAESALIDMYGKCGN-LSVARCVFDMMREKNEVSWNSII 449
Query: 393 AACKNHGNIEVAERVVKEII--ALEPNNHGVYVVLS 426
AA +HG++EV+ + +++ ++P++ +LS
Sbjct: 450 AAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 190/366 (51%), Gaps = 4/366 (1%)
Query: 46 DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMN 105
D F S L+ A +G + A RLF+ + + + +WN ++ P+ A+ ++ +
Sbjct: 6 DEFVGSSLIKLYA--ENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFED 63
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
MR PN TF VL C++ Q+H V G D V N LV YS
Sbjct: 64 MRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQ 123
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L++A ++F+ + + + W MI+G+ Q+ +EA +LF +M+ G P+S+T AS L +
Sbjct: 124 LSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPS 183
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
+S L+ G+++H ++ G + L +AL+ +Y K + A +F +I
Sbjct: 184 VTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVC 243
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
A+ISG +G +AL++FR L +E++ PN +T VL AC +++G+++ ++ +
Sbjct: 244 TAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILK 303
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
+G++ + ++D+ +CG++ A ++ +RM K D V W A++ C +G + A
Sbjct: 304 -HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK-DAVCWNAIITNCSQNGKPQEAI 361
Query: 406 RVVKEI 411
+ +++
Sbjct: 362 DLFRQM 367
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 139/250 (55%), Gaps = 2/250 (0%)
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G ++D V + L++ Y+ + + +AR++FD++ N+ +W M++G+ + N A+ +F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+ M +PNS+T ASVLS CA E G ++H V GF ++ ALV MY+K
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G L+ A LF++MP+ N+ TWN MI+G +G +EA LF ++ + P+ ITF L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
+ + + G++I G + R +GI + ++D+ +C V A ++ K+ D
Sbjct: 182 PSVTESASLKQGKEIHGYILR-HGIALDVFLKSALIDIYFKCRDVGMACKIFKQST-NVD 239
Query: 385 VVMWGALLAA 394
+V+ A+++
Sbjct: 240 IVVCTAIISG 249
>gi|125556645|gb|EAZ02251.1| hypothetical protein OsI_24351 [Oryza sativa Indica Group]
Length = 476
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 237/421 (56%), Gaps = 11/421 (2%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTF 118
++SG L+ A +LF+ I P+ +WNTL+ A A S P A+ M R G + PN +
Sbjct: 52 AASGSLAAARKLFDEIPRPDVPLWNTLLSACARSGLPQHALVTASTMARAGSSRPNNVSV 111
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
T +L AC+ +RSL ++IH + ++ LDL ++N LV Y L NAR VFD I +
Sbjct: 112 TILLSACARLRSLVHGREIHGYAVRNLAALDLPLLNALVSMYGRCGRLVNARMVFDSIGS 171
Query: 179 -RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL-ELGE 236
+++ WT MI+ ++ + EAL +F+QM + G + + VTL +V+SAC C ELGE
Sbjct: 172 MKSVVSWTCMINACCENGKPAEALQVFEQMRLAGVKVDEVTLLAVISACTMLDCRSELGE 231
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+ GF + AL+HM+ K G + ++ +FDS+ R + +W A+I LA HG
Sbjct: 232 WEEEYAHENGFLENTRVANALIHMHGKMGRVRRSCEIFDSITVRTVVSWTAIIQALAVHG 291
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
H AL F ++ ++ P+++ F+ V++AC H+G ++ RQ+F SM Y I P +EHY
Sbjct: 292 HGVAALVRFSQMLRQGFQPDELVFLSVINACGHSGLVNEARQLFKSMVEEYHITPWMEHY 351
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
G MVDLL + G + EA E + M +PD V+W L AC++ GN +A +VV +I +EP
Sbjct: 352 GSMVDLLCKSGMLEEAFEFVLAMPVRPDPVIWRVLTGACRDLGNAILARKVVDHVIEMEP 411
Query: 417 NNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADIL--------QNPDFESPPT 468
G YV+ SN+YA E + +++ + ++ + + L +N + PPT
Sbjct: 412 EYGGNYVLASNLYAANEDWRRVVDVRMEMGVWKETSRYSTALSYVEVNVEENAESLHPPT 471
Query: 469 N 469
N
Sbjct: 472 N 472
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 234/400 (58%), Gaps = 36/400 (9%)
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSN 127
T++F + + WN +I ++A+ +Y M + PN+ T L AC+
Sbjct: 163 TQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAV 222
Query: 128 VRSLNCCKQIHTHVSKSGLDL---------DLHV-------------------VNC---L 156
+R+L K+IH +++ S LDL D++ VNC +
Sbjct: 223 LRNLELGKEIHDYIA-SELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSM 281
Query: 157 VRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNS 216
V Y + L+ AR +F+ +R + +WT MI+GY Q R E + LF +M + G +P+
Sbjct: 282 VTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDK 341
Query: 217 VTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS 276
+ ++L+ CAQSG LE G+ +H ++ ++ A++GTAL+ MY K G + K+ +F+
Sbjct: 342 FIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNG 401
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+ E++ +W ++I GLA +G EAL+LF+ ++ + P+DITFV VLSAC HAG ++ G
Sbjct: 402 LKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEG 461
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD---VVMWGALLA 393
R++F SM +Y IEP +EHYGC +DLLGR G + EAEEL+K++ + + V ++GALL+
Sbjct: 462 RKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLS 521
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
AC+ +GNI++ ER+ + ++ ++ ++ +L+++YA A+
Sbjct: 522 ACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASAD 561
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 261/553 (47%), Gaps = 87/553 (15%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
++CS L + +SLL CKSM QLKQI A + QD ++L+AF SS
Sbjct: 1 MQCSKLMKGTY----ISLLKS-CKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSL 55
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GD +YA R+FN I P+ F++N +I+A S + AI L+ +R G P+ +T+ +VL
Sbjct: 56 GDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVL 115
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
K + + +++H V K+GL+ D +V N + Y+ + QVF+E+ +R
Sbjct: 116 KGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAV 175
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFE-PNSVTLASVLSACAQSGCLELGEKVHVF 241
W MISGY + R EA+ ++ +M E E PN T+ S LSACA LELG+++H +
Sbjct: 176 SWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY 235
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM------------------------ 277
+ ++ I+G AL+ MY K G ++ A+ +FD+M
Sbjct: 236 IASE-LDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQA 294
Query: 278 -------PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
P R+I W AMI+G EE + LF +++ + P+ V +L+ C +
Sbjct: 295 RNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQS 354
Query: 331 GFIDVGRQIF-------------------------GSMKRVYGI-----EPKIEHYGCMV 360
G ++ G+ I G +++ + I E + ++
Sbjct: 355 GALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSII 414
Query: 361 DLLGRCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEVAERV---VKEIIAL 414
L GK EA EL K M KPD + + A+L+AC + G +E ++ + + +
Sbjct: 415 CGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHI 474
Query: 415 EPN--NHGVYVVL---SNMYAEAESMKMQL-----EILLVQVLFAGLASAADILQNPDF- 463
EPN ++G ++ L + + EAE + +L EI++ L+ L SA N D
Sbjct: 475 EPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIV--PLYGALLSACRTYGNIDMG 532
Query: 464 ESPPTNLTPNRST 476
E T L +S+
Sbjct: 533 ERLATALAKVKSS 545
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 219/404 (54%), Gaps = 9/404 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF---MWNTLIR 88
KQIH I ++ + D F ++ L+ A S + + A LF N+F WN ++
Sbjct: 444 KQIHVHAIKTNNVADSFVSTALID--AYSRNRCMKEAEVLFGR----NNFDLVAWNAMMS 497
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
S + K + L+ M + G + T VLK C + ++N KQ+H + KSG DL
Sbjct: 498 GYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDL 557
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
DL V + ++ Y D++ A+ FD I WTT+ISG ++ AL +F QM
Sbjct: 558 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMR 617
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+ G P+ T+A++ A + LE G ++H +GT+LV MY K G++
Sbjct: 618 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSID 677
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A LF + NI WNAM+ GLA HG +EAL LF+++E I P+ +TF+GVLSAC
Sbjct: 678 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACS 737
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H+G + + SM R YGI+P+IEHY C+ D LGR G V EAE LI M + M+
Sbjct: 738 HSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMY 797
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
LLAAC+ G+ E +RV +++ LEP + YV+LSNMYA A
Sbjct: 798 RTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAA 841
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 185/375 (49%), Gaps = 11/375 (2%)
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
+C L G A +FN++ + WN++I A S +A+ L+M + R G P+
Sbjct: 367 YCKLRKIG---LARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDH 423
Query: 116 HTFTFVLKACSNV-RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+T T VLKA S++ L+ KQIH H K+ D V L+ YS + + A +F
Sbjct: 424 YTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFG 483
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
N L W M+SGY QS ++ L LF M +G + TLA+VL C +
Sbjct: 484 R-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQ 542
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G++VH + G+++ + + ++ MY K G ++ A+ FDS+P + W +ISG
Sbjct: 543 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIE 602
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKI 353
+G E AL +F ++ ++P++ T + A ++ GRQI ++K +P +
Sbjct: 603 NGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFV 662
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI-- 411
+VD+ +CG + +A L KR + ++ W A+L HG + A ++ K++
Sbjct: 663 G--TSLVDMYAKCGSIDDAYCLFKR-IEMMNITAWNAMLVGLAQHGEGKEALQLFKQMES 719
Query: 412 IALEPNNHGVYVVLS 426
+ ++P+ VLS
Sbjct: 720 LGIKPDKVTFIGVLS 734
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA-----NEALMLFDQ 206
+VN L+ YS L AR+VFD++ R L W ++++ YAQS EA +LF
Sbjct: 83 LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRI 142
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
+ + + +TL+ +L C SG + E H + G + + ALV++Y K G
Sbjct: 143 LRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGK 202
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
+ + + LF+ MP R++ WN M+ G EEA+DL + PN+IT
Sbjct: 203 VKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 211 GFEPNSVTLASV-LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
GF ++++ + + L C + L L E F L L+ MY+K G+L
Sbjct: 51 GFLRDAISTSDLMLGKCTHARILALEENPERF-----------LVNNLISMYSKCGSLTY 99
Query: 270 AKALFDSMPERNIATWNAMISGLA--SHGHAE---EALDLFRKLEKEQIVPNDITFVGVL 324
A+ +FD MPER++ +WN++++ A S G E EA LFR L ++ + + +T +L
Sbjct: 100 ARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPML 159
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
C H+G++ G ++ G++ G +V++ + GKV E L + M ++ D
Sbjct: 160 KLCLHSGYVCASESFHGYACKI-GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-D 217
Query: 385 VVMWGALLAACKNHGNIEVA 404
VV+W +L A G E A
Sbjct: 218 VVLWNLMLKAYLEMGFKEEA 237
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 142/332 (42%), Gaps = 36/332 (10%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G + LF + + +WN +++A ++AI L +G PN+ T +
Sbjct: 201 GKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLL- 259
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
+I S++G V+ + +D + ++ RN+ L
Sbjct: 260 ------------SRISGDDSEAGQ----------VKSFENGNDASAVSEIIS--RNKIL- 294
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
SGY + + + L F M+ E + VT VL+ + L LG++VH
Sbjct: 295 ------SGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMA 348
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G ++ + +L++MY K + A+ +F++M ER++ +WN++I+G+A EA+
Sbjct: 349 LKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAV 408
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCH-AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
LF +L + + P+ T VL A + + +QI + + ++D
Sbjct: 409 CLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTA-LID 467
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
R + EAE L R + D+V W A+++
Sbjct: 468 AYSRNRCMKEAEVLFGRNNF--DLVAWNAMMS 497
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 152/367 (41%), Gaps = 41/367 (11%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K HA+++ + F + L++ S G L+YA R+F+ + + WN+++ A A
Sbjct: 66 KCTHARILALEENPERFLVNNLISM--YSKCGSLTYARRVFDKMPERDLVSWNSILAAYA 123
Query: 92 SSL-----NPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
S N +A L+ +R+ ++ T + +LK C + + + H + K GL
Sbjct: 124 QSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGL 183
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D D V LV Y + R +F+E+ R + +W M+ Y + EA+ L
Sbjct: 184 DGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 243
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
G PN +TL +LS + E G+ ++ FE G
Sbjct: 244 FHTSGLHPNEITL-RLLSRISGDDS-EAGQ-------VKSFENGN--------------- 279
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
D+ I + N ++SG G L F + + + + +TF+ VL+
Sbjct: 280 --------DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLAT 331
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
+ +G+Q+ M G++ + ++++ + K+ A + M + D++
Sbjct: 332 AVRLDSLALGQQVH-CMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSER-DLI 389
Query: 387 MWGALLA 393
W +++A
Sbjct: 390 SWNSVIA 396
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 37/213 (17%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ Q +QIHA + + D F + L+ A S D +Y LF I+ N WN +
Sbjct: 640 ALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYC--LFKRIEMMNITAWNAM 697
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
+ A +A+ L+ M G P++ TF VL ACS+ SGL
Sbjct: 698 LVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSH----------------SGL 741
Query: 147 DLDLH-VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ + + + R Y + ++ + ++ + ++ EA L D
Sbjct: 742 VSEAYKYIRSMHRDYGIKPEIEH---------------YSCLADALGRAGLVKEAENLID 786
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
M ME ++ ++L+AC G E G++V
Sbjct: 787 SMSMEA---SASMYRTLLAACRVQGDTETGKRV 816
>gi|242078691|ref|XP_002444114.1| hypothetical protein SORBIDRAFT_07g008510 [Sorghum bicolor]
gi|241940464|gb|EES13609.1| hypothetical protein SORBIDRAFT_07g008510 [Sorghum bicolor]
Length = 718
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 214/415 (51%), Gaps = 64/415 (15%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHF-----MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP 113
LS G+ R+ ++ + H + + LIRA + S P A+ LY ++ R G P
Sbjct: 11 LSRCGEARAIVRIQAALVTSGHLRRSVELHDALIRALSRSARPHLALPLYAHLLRAGLLP 70
Query: 114 NQHTFTFVLK------ACSNVRSLNCCKQIHTHVSKSGLD-------------------- 147
HT +LK A V L +H H K GL+
Sbjct: 71 TPHTLPSLLKSMALSPAAPGVAVLALT--VHAHAVKLGLERFVLVSNALIRVHAGFLGRL 128
Query: 148 ------------LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+D N L+ Y+ + + +AR +FDE+ R W+ M++GY Q+
Sbjct: 129 ADGLLLLRTAAAVDASTFNTLITAYARAGRVADARALFDEMPVRNAVSWSAMVNGYVQAG 188
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
A EAL +F QM E P+ L VL+ACAQ G LE G+ VH ++K G + GT
Sbjct: 189 DAREALQIFAQMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIRITVFFGT 248
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
ALV MY+K G + A +F+ M ++N+ W MI LA HG EAL LF ++
Sbjct: 249 ALVDMYSKCGEVQLAMEVFERMEDKNVLAWTTMIKSLAMHGRGSEALMLFTQM------- 301
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
+G +D GR++F SM R YGI+PKIEHYGCMVDLL R G + EA+E+
Sbjct: 302 ------------VSSGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLDEAKEM 349
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
I++M KPD ++WGAL+A C+ H N+E+AE VV+ I LEP+ G YV+L+N+YA
Sbjct: 350 IQKMPMKPDALIWGALMAGCRFHKNVELAEYVVRHWILLEPDKSGAYVLLANIYA 404
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 21/251 (8%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A + +G ++ A LF+ + N W+ ++ + + +A+ ++ M+ P+
Sbjct: 152 AYARAGRVADARALFDEMPVRNAVSWSAMVNGYVQAGDAREALQIFAQMQAEDVRPDDTV 211
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
VL AC+ +L K +H ++ G+ + + LV YS ++ A +VF+ +
Sbjct: 212 LVGVLAACAQHGALEQGKWVHGYLKAHGIRITVFFGTALVDMYSKCGEVQLAMEVFERME 271
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG-E 236
++ + WTTMI A R +EALMLF QM+ SG ++ G E
Sbjct: 272 DKNVLAWTTMIKSLAMHGRGSEALMLFTQMV-------------------SSGLVDKGRE 312
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA-TWNAMISGLASH 295
V+ G + +V + +NG L +AK + MP + A W A+++G H
Sbjct: 313 LFDSMVRKYGIKPKIEHYGCMVDLLARNGFLDEAKEMIQKMPMKPDALIWGALMAGCRFH 372
Query: 296 GHAEEALDLFR 306
+ E A + R
Sbjct: 373 KNVELAEYVVR 383
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 234/410 (57%), Gaps = 5/410 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMW 83
C S+ IHA++I S D F RL++ + L D A RLF+ + + + W
Sbjct: 152 CTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDED---AQRLFDEMPNRDLVSW 208
Query: 84 NTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N+L+ + + + MR +G PN+ T V+ AC+ + +L+ K +H V
Sbjct: 209 NSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVV 268
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G+ VVN L+ Y L+ A Q+F+E+ R+L W +M+ + + A + +
Sbjct: 269 KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMD 328
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF+ M G P+ T+ ++L AC +G E +H ++ GF I+ TAL+++Y
Sbjct: 329 LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYA 388
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G L ++ +F+ + +R+ W AM++G A H EA+ LF + KE + + +TF
Sbjct: 389 KLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTH 448
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+LSAC H+G ++ G++ F M VY +EP+++HY CMVDLLGR G++ +A ELIK M +
Sbjct: 449 LLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPME 508
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
P +WGALL AC+ +GN+E+ + V +++++L+P++H Y++LSN+Y+ A
Sbjct: 509 PSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAA 558
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 239/438 (54%), Gaps = 40/438 (9%)
Query: 32 KQIHAQMIIS--SRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI--QSPNHFMWNTLI 87
+++HA +I + + + F + LL F A S G A ++F+ I + W TL+
Sbjct: 33 ERLHATIITTGIAGAPETFLHNALLQFYA--SCGCAWQARKVFDEIPHSHKDTVDWTTLM 90
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
D+A+ +++ MRR G P++ T + C+ + + Q H + K GL
Sbjct: 91 GCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLG 150
Query: 148 LDLHVVNCLVRCYSVS-------------------------------SDLNNARQVFDEI 176
N ++ Y+ S + N R VFDE+
Sbjct: 151 GVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEM 210
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELG 235
R WT MI+GY S E+ L +M+ + E N VTL S+L+AC+QSG L +G
Sbjct: 211 PERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMG 270
Query: 236 EKVHVF-VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
VH + +K + E+ ++GTA+V MY K G + A F MP+RN+ +WNAM+SGLA
Sbjct: 271 RWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAM 330
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG ALD+F ++ KE P+D+TF VLSAC H+G +D G FG+++ VYGI PK+E
Sbjct: 331 HGLGRAALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVE 389
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HY CMVDLLGR G++ EAE L++ M +P+ V+ G+LL +C HG +++ E +++E++ L
Sbjct: 390 HYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQL 449
Query: 415 EPNNHGVYVVLSNMYAEA 432
+P N +++LSNMYA A
Sbjct: 450 DPQNTEYHILLSNMYALA 467
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 159/334 (47%), Gaps = 47/334 (14%)
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVRCYSV 162
R T + + F+L++C+ SL+ +++H + +G+ + LH N L++ Y+
Sbjct: 5 RHTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLH--NALLQFYAS 62
Query: 163 SSDLNNARQVFDEIRNRTLNV--WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLA 220
AR+VFDEI + + WTT++ + + ++EAL++F +M G +P+ VTL
Sbjct: 63 CGCAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLV 122
Query: 221 SVLSACAQSGCLELGEKVH-VFVKM--RGFEMGAILGTALVHMYTKNGALAKA------- 270
+ CA+ G + +G + H VKM G E A++ MY K+G + +A
Sbjct: 123 CLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKAC---NAVMDMYAKSGLMGEARRVFYEM 179
Query: 271 ------------------------KALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
+ +FD MPERN W MI+G G +E+ L R
Sbjct: 180 KGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVR 239
Query: 307 KLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
++ + ++ N +T +L+AC +G + +GR + + E I MVD+ +
Sbjct: 240 EMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAK 299
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
CG++ A + K+M + +VV W A+L+ HG
Sbjct: 300 CGRIHIAFKFFKKMPQR-NVVSWNAMLSGLAMHG 332
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 234/411 (56%), Gaps = 6/411 (1%)
Query: 23 DKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
+ C S+ L +Q+HA I + D F + L+ A S L+ A ++F+ + + N
Sbjct: 364 NSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDS--LTNARKVFDLVAAIN 421
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+N +I + +A+ L+ MR + P TF +L S++ L QIH
Sbjct: 422 VVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHC 481
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
+ K G+ LD + L+ YS S + +AR VF+EI +R + VW M SGY+Q E
Sbjct: 482 LIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEE 541
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
+L L+ + M +PN T A+V++A + L G++ H V G + + +LV
Sbjct: 542 SLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVD 601
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G++ ++ F S +R+IA WN+MIS A HG A +AL++F ++ E + PN +T
Sbjct: 602 MYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVT 661
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
FVG+LSAC HAG +D+G F SM + +GIEP I+HY CMV LLGR GK+ EA+E +K+M
Sbjct: 662 FVGLLSACSHAGLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKM 720
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
KP V+W +LL+AC+ G++E+ + I+ +P + G Y++LSN++A
Sbjct: 721 PIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFA 771
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 199/402 (49%), Gaps = 6/402 (1%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ Q Q+H ++ +QD + + L+ F A G + A +F+ ++ W +
Sbjct: 169 NLSQALQLHGFVVKGGFVQDVYVGTSLIDFYA--KRGYVDEARLIFDGLKVKTTVTWTAI 226
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
I A + ++ L+ MR P+++ + VL ACS + L KQIH +V + G
Sbjct: 227 IAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGF 286
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D+D+ VVN ++ Y + R++F+ + ++ + WTTMI+G Q+ +A+ LF +
Sbjct: 287 DMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVE 346
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M+ +G++P++ SVL++C L+ G +VH + + + L+ MY K +
Sbjct: 347 MVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDS 406
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L A+ +FD + N+ ++NAMI G + EALDLFR++ P +TFV +L
Sbjct: 407 LTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGL 466
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
+++ QI + + +G+ ++D+ +C V +A L+ ++ D+V
Sbjct: 467 SSSLFLLELSSQIHCLIIK-FGVSLDSFAGSALIDVYSKCSCVGDA-RLVFEEIYDRDIV 524
Query: 387 MWGALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVLS 426
+W A+ + E + ++ K++ L+PN V++
Sbjct: 525 VWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIA 566
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 201/396 (50%), Gaps = 17/396 (4%)
Query: 29 HQLKQIHAQMIISSRIQ-DHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
H K+IHA +++ Q D F + LL A+ ++ D A +LF+++ N W+++
Sbjct: 68 HYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSD---AQKLFDTMPHRNLVTWSSM 124
Query: 87 IRAQASSLNPDKAIFLYMN-MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+ +A+ L+ MR PN++ V++AC+ + +L+ Q+H V K G
Sbjct: 125 VSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGG 184
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D++V L+ Y+ ++ AR +FD ++ +T WT +I+GYA+ R+ +L LF+
Sbjct: 185 FVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFN 244
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
QM P+ ++SVLSAC+ LE G+++H +V RGF+M + ++ Y K
Sbjct: 245 QMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCH 304
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
+ + LF+ + ++++ +W MI+G + +A+DLF ++ ++ P+ VL+
Sbjct: 305 KVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLN 364
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEH----YGCMVDLLGRCGKVLEAEELIKRMVW 381
+C + GRQ+ Y I+ I++ ++D+ +C + A ++ +V
Sbjct: 365 SCGSLQALQKGRQV-----HAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFD-LVA 418
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEI-IALEP 416
+VV + A++ + A + +E+ ++L P
Sbjct: 419 AINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSP 454
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 182/352 (51%), Gaps = 8/352 (2%)
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
+LFN + + W T+I + A+ L++ M R G+ P+ T VL +C +++
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQ 370
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
+L +Q+H + K +D D V N L+ Y+ L NAR+VFD + + + MI
Sbjct: 371 ALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIE 430
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY++ + EAL LF +M + P +T S+L + LEL ++H + G +
Sbjct: 431 GYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSL 490
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ G+AL+ +Y+K + A+ +F+ + +R+I WNAM SG + EE+L L++ L+
Sbjct: 491 DSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQ 550
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
++ PN+ TF V++A + + G+Q + ++ G++ +VD+ +CG +
Sbjct: 551 MSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKM-GLDDDPFVTNSLVDMYAKCGSI 609
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALEPN 417
E+ + + D+ W ++++ HG+ +EV ER++ E ++PN
Sbjct: 610 EESHKAFSSTNQR-DIACWNSMISTYAQHGDAAKALEVFERMIME--GVKPN 658
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 222/402 (55%), Gaps = 2/402 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+H KQIH + + + + L+ G L A + F + W+ +I
Sbjct: 230 VHYGKQIHCLALKNGLLSIASVGNALVTM--YGKCGCLDDALKTFELSGDKDDITWSAMI 287
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
A + + +A+ L+ NM G P++ TF V+ ACS++ +L KQIH + K+G +
Sbjct: 288 TGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYE 347
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
++ + LV Y+ L +AR+ FD ++ + +WT+MISGYAQ+ AL L+ +M
Sbjct: 348 CQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRM 407
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
ME P+ +T+ASVL AC+ LE G+++H GF + +G+AL MY K G+L
Sbjct: 408 QMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSL 467
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+F MP R+I TWNAMISGL+ +G +AL+LF +L P+ +TFV VLSAC
Sbjct: 468 EDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSAC 527
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G ++ G+ F M +GI P++EHY CMVD+L R GK+ E +E I+ + +
Sbjct: 528 SHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCL 587
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
W LL AC+N+ N E+ ++++ L Y++LS++Y
Sbjct: 588 WRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIY 629
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 203/410 (49%), Gaps = 16/410 (3%)
Query: 33 QIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
Q HA I +S D F S L+ +C + D A ++F++I N W T+I A
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLD---ARKVFDTIPERNTVSWATIISGYA 190
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+A L+ MRR A ++ +T VL A + ++ KQIH K+GL
Sbjct: 191 MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N LV Y L++A + F+ ++ W+ MI+GYAQ+ ++EAL LF M + G
Sbjct: 251 VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNG 310
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+ T V++AC+ G LE G+++H + G+E TALV MY K G+L A+
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDAR 370
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
FD + E +I W +MISG A +G E AL L+ +++ E+I+P+++T VL AC
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G+QI + YG ++ + + +CG LE L+ R + D++ W A+
Sbjct: 431 ALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGS-LEDGNLVFRRMPSRDIMTWNAM 488
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGV----YVVLSNMYAEAESMKM 437
++ +G +K + E HG YV N+ + M +
Sbjct: 489 ISGLSQNG------EGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGL 532
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 193/400 (48%), Gaps = 15/400 (3%)
Query: 15 IPP-------LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
+PP L L + K + + K IHAQ++ + + + L+ A G +
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYA--KCGSIVK 63
Query: 68 ATRLFNSIQSPNHFMWNTLIR--AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
A +F SI + + WN LI +Q ++ + L+ MR PN HTF+ V A
Sbjct: 64 AKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAA 123
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S+ Q H K+ D+ V + L+ Y + +AR+VFD I R W
Sbjct: 124 SSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWA 183
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
T+ISGYA A EA LF M E + SVLSA + G+++H
Sbjct: 184 TIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN 243
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G A +G ALV MY K G L A F+ +++ TW+AMI+G A G + EAL+LF
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF 303
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLG 364
+ P++ TFVGV++AC G ++ G+QI G S+K G E +I +VD+
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKA--GYECQIYFMTALVDMYA 361
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+CG +++A + + +PD+V+W ++++ +G E A
Sbjct: 362 KCGSLVDARKGFDYLK-EPDIVLWTSMISGYAQNGENETA 400
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 236/431 (54%), Gaps = 48/431 (11%)
Query: 59 LSSSGDLSYATRLFNSIQ-SPNHFMWNTLIRAQASSLNPDK---AIFLYMNMRRTGFAPN 114
+S +SYA +F+ F+WN +IRA +++P + I +Y MR +P+
Sbjct: 1 MSKEAIISYANPIFHIRHLKLESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPD 60
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
HTF F+L + N L ++ H + GLD D V L+ YS DL++A ++FD
Sbjct: 61 FHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFD 120
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF------------ 212
E ++ L W ++++ YA++ N A LFD+M L+ G+
Sbjct: 121 ESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDL 180
Query: 213 --------------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
PN T+++VLSAC + G LE G+ VH ++ G E+ +LGTAL+
Sbjct: 181 FREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALI 240
Query: 259 HMYTKNGALAKAKALFDSM-PERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIVPN 316
MY K G+L +AK +FD++ ++++ ++AMI LA +G +E +F ++ I PN
Sbjct: 241 DMYAKCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPN 300
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
+TFVG+L AC H G I+ G+ F M +GI P I+HYGCMVDL GR G + EAE I
Sbjct: 301 SVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 360
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------ 430
M +PDV++WG+LL+ + G+I+ E +K +I L+P N G YV+LSN+YA
Sbjct: 361 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWI 420
Query: 431 EAESMKMQLEI 441
E + ++ ++E+
Sbjct: 421 EVKRIRHEMEV 431
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-----RTGFA 112
A + +G +++A +LF+ + N W+ LI +A+ L+ M+ +
Sbjct: 136 AYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVS 195
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
PN+ T + VL AC + +L K +H+++ K G+++D+ + L+ Y+ L A++V
Sbjct: 196 PNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRV 255
Query: 173 FDEI-RNRTLNVWTTMISGYAQSFRANEALMLFDQMLME-GFEPNSVTLASVLSACAQSG 230
FD + + + ++ MI A +E +F +M PNSVT +L AC G
Sbjct: 256 FDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRG 315
Query: 231 CLELGEKVHVFVKMRGFEMGAILGT----ALVHMYTKNGALAKAKALFDSMP-ERNIATW 285
+ G+ + KM E G +V +Y ++G + +A++ SMP E ++ W
Sbjct: 316 LINKGKS---YFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 372
Query: 286 NAMISG 291
+++SG
Sbjct: 373 GSLLSG 378
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 230/417 (55%), Gaps = 9/417 (2%)
Query: 25 CKSMHQLKQIHAQMIIS--SRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
C S+ + ++ HA+ + R H A G ++YA +F ++ P F
Sbjct: 41 CASLDEARKAHARHVKLGLDRSPRHARPLLAACALAADWPGSMAYAASIFAALDDPEAFD 100
Query: 83 WNTLIRAQASSL-----NPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
+NTL+R + +P A+ L+++M G P+ +TF FV KAC+ + +L +Q+
Sbjct: 101 YNTLMRGYVAGGGGGGRDPAAALRLFVDMVDDGVEPDSYTFPFVFKACAQLGALQEGRQL 160
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN--RTLNVWTTMISGYAQSF 195
H+ K G D H N L+ Y + + AR+ F+++ + +T W+ +++ Y ++
Sbjct: 161 QGHLVKLGFQRDEHSQNSLISFYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYTRAG 220
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
R E + F M+ G+ P+ ++ S LSACA G ++G +H + + + T
Sbjct: 221 RWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVGRSIHCALLRNTARLNTFMST 280
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
+LV MY K G + A A+FD+M ++N T++AM+SGLA HG +AL++F + +E P
Sbjct: 281 SLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHRP 340
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
+ +VGVL+AC AG ++ G + F M+ + + P +HYGCMVDL+ R G++ +A L
Sbjct: 341 DAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARAL 400
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
I M P W +LL AC+ HGN+E+AER ++E+ L N G Y++LS+M+A A
Sbjct: 401 IGNMPTGPTDTAWRSLLNACRIHGNLELAERALQELERLGATNAGDYIILSDMHARA 457
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 235/410 (57%), Gaps = 5/410 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMW 83
C S+ IHA++I S D F RL++ + L D A RLF+ + + + W
Sbjct: 132 CTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDED---AQRLFDEMPNKDLVSW 188
Query: 84 NTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N+L+ + + + MR +G PN+ T V+ AC+++ +L+ K +H V
Sbjct: 189 NSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVV 248
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
K G+ VVN L+ Y L+ A Q+F+E+ R+L W +M+ + + A + +
Sbjct: 249 KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMD 308
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF+ M G P+ T+ ++L AC +G E +H ++ GF I+ TAL+++Y
Sbjct: 309 LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYA 368
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G L ++ +F+ + +R+ W AM++G A H EA+ LF + KE + + +TF
Sbjct: 369 KLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTH 428
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+LSAC H+G ++ G++ F M VY +EP+++HY CMVDLLGR G++ +A ELIK M +
Sbjct: 429 LLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPME 488
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
P +WGALL AC+ +GN+E+ + V +++++L+P++H Y++LSN+Y+ A
Sbjct: 489 PSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAA 538
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 228/417 (54%), Gaps = 5/417 (1%)
Query: 19 SLLADKCKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
S L +C + +++Q +HA ++ S + +H ++ + G L A R+F+ +
Sbjct: 91 SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV-NMYAKCGCLDDARRMFDEM 149
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
+ + W LI + + P A+ L+ M R GF PN T + +LKA + L+
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGT 209
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H K G ++V + LV Y+ ++ A+ FD + ++ W +ISG+A+
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
AL L +M + F+P T +SVLSACA G LE G+ VH + G ++ A +G
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
L+ MY K G++ AK +FD + + ++ +WN M++G A HG +E LD F ++ + I P
Sbjct: 330 TLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
N+I+F+ VL+AC H+G +D G F MK+ Y +EP + HY VDLLGR G + AE
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERF 448
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
I+ M +P +WGALL AC+ H N+E+ + L+P++ G ++LSN+YA A
Sbjct: 449 IREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASA 505
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 181/325 (55%), Gaps = 7/325 (2%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV--NCLVRCYSVS 163
++R P+ + ++ +LK C+ + + + +H H+ S LD H+V N +V Y+
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMYAKC 136
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
L++AR++FDE+ + + WT +I+G++Q+ R +AL+LF QML GF+PN TL+S+L
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
A L+ G ++H F G++ +G+ALV MY + G + A+ FD MP ++
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEV 256
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WNA+ISG A G E AL L K++++ P T+ VLSAC G ++ G+ + M
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHM 316
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIE 402
+ G++ ++D+ + G + +A+ + R+V KPDVV W +L C HG E
Sbjct: 317 IKS-GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLV-KPDVVSWNTMLTGCAQHGLGKE 374
Query: 403 VAERVVKEI-IALEPNNHGVYVVLS 426
+R + + I +EPN VL+
Sbjct: 375 TLDRFEQMLRIGIEPNEISFLCVLT 399
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 235/406 (57%), Gaps = 6/406 (1%)
Query: 29 HQLK-QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN-SIQSPNHFMWNTL 86
H+L Q+HA+++ D + ++ A S G + A R+F+ +I++ + WN++
Sbjct: 217 HKLTTQVHAKIVKHGLASDTTVCNAIIT--AYSECGSIEDAERVFDGAIETRDLVTWNSM 274
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGL 146
+ A + ++A L++ M+ GF P+ +T+T V+ A K +H V K GL
Sbjct: 275 LAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGL 334
Query: 147 DLDLHVVNCLVRCY--SVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
+ + + N L+ Y S S ++ A +F+ + N+ W ++++G++QS + +AL F
Sbjct: 335 EFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFF 394
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+ M + + ++VL +C+ L+LG++VHV V GFE + ++L+ MY+K
Sbjct: 395 ENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKC 454
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + A+ FD+ P+ + WN++I G A HG + ALDLF ++ ++ + ITFV VL
Sbjct: 455 GVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVL 514
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
+AC H G ++ G SM+ YGI P++EHY CM+DLLGR G++ EA+ LI+ M ++PD
Sbjct: 515 TACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPD 574
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
++W LL AC+ G+IE+A +V ++ LEP H YV+LS+M+
Sbjct: 575 AMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFG 620
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 136/280 (48%), Gaps = 1/280 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G++ A+++F + WNT+I + N + A+ +M+R GFA + ++F +L
Sbjct: 48 GEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSIL 107
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
K + V + +Q+H+ + K G + ++ + L+ Y+ + +A +VF I R
Sbjct: 108 KGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSV 167
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
W +ISGYAQ A L D M +EG E + T A +L+ +L +VH +
Sbjct: 168 TWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKI 227
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEA 301
G + A++ Y++ G++ A+ +FD E R++ TWN+M++ + EEA
Sbjct: 228 VKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEA 287
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
LF +++ P+ T+ V+SA G+ + G
Sbjct: 288 FQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHG 327
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 13/318 (4%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+Q +FT + +A S+N C I KSG ++ N ++ Y+ ++ A ++F
Sbjct: 8 SQSSFTALYRA-----SVNHCLAI-----KSGTTASIYTANNIISGYAKCGEIRIASKMF 57
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
E R W TMI+G+ AL M GF + + S+L A G +E
Sbjct: 58 GETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVE 117
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
+G++VH + G+E G+AL+ MY K + A +F S+ RN TWNA+ISG A
Sbjct: 118 VGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYA 177
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
G A L +E E + +D TF +L+ + Q+ + + +G+
Sbjct: 178 QVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVK-HGLASDT 236
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE--I 411
++ CG + +AE + + D+V W ++LAA + E A ++ E +
Sbjct: 237 TVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQV 296
Query: 412 IALEPNNHGVYVVLSNMY 429
+ EP+ + V+S +
Sbjct: 297 LGFEPDIYTYTSVISAAF 314
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 221/409 (54%), Gaps = 5/409 (1%)
Query: 25 CKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C + Q+K QIH +I+ + A+ L + G++ LF ++ +
Sbjct: 213 CAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATM--YTECGEMRDGLCLFENMSERDVV 270
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
W +LI A + +KA+ ++ MR + PN+ TF + AC+++ L +Q+H +V
Sbjct: 271 SWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNV 330
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
GL+ L V N +++ YS L++A +F +R R + W+T+I GY+Q+ EA
Sbjct: 331 FSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAF 390
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
F M G +P LAS+LS LE G +VH G E + + + L++MY
Sbjct: 391 KYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMY 450
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+K G + +A +F+ +I + AMI+G A HG ++EA+DLF K K P+ +TF+
Sbjct: 451 SKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFI 510
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
VL+AC H+G +D+G F M+ Y + P EHYGCMVDLL R G++ EAE++I M W
Sbjct: 511 SVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSW 570
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
K D V+W LL ACK G+IE R + I+ L+P V L+N+Y+
Sbjct: 571 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYS 619
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 168/344 (48%), Gaps = 4/344 (1%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRT--GFAPNQ 115
+L ++G+L A ++F+ + + W +I+ ++ N D+A+ L+ MR +P+
Sbjct: 43 SLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDT 102
Query: 116 HTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
+ VLKAC ++ + +H + K+ L + V + L+ Y + + +VF E
Sbjct: 103 SVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSE 162
Query: 176 IRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+ R WT +I+G + R E L F +M ++ T A L ACA ++ G
Sbjct: 163 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYG 222
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
+++H V +RGF+ + +L MYT+ G + LF++M ER++ +W ++I
Sbjct: 223 KQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRI 282
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH 355
GH E+A++ F K+ Q+ PN+ TF + SAC + G Q+ ++ + G+ +
Sbjct: 283 GHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSL-GLNDSLSV 341
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
M+ + CGK+ A L + M + D++ W ++ G
Sbjct: 342 SNSMMKMYSTCGKLDSASVLFQGMRCR-DIISWSTIIGGYSQAG 384
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 180/399 (45%), Gaps = 10/399 (2%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ +HA + +S + F S LL G + + R+F+ + N W +I
Sbjct: 122 ESLHAYAVKTSLLSSVFVGSSLLDM--YKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLV 179
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ + + + M + + TF LKAC+ +R + KQIHTHV G D +
Sbjct: 180 HAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVW 239
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L Y+ ++ + +F+ + R + WT++I Y + +A+ F +M
Sbjct: 240 VANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQ 299
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN T A++ SACA L GE++H V G + +++ MY+ G L A
Sbjct: 300 VPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSAS 359
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LF M R+I +W+ +I G + G EEA F + + P D +LS +
Sbjct: 360 VLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMA 419
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ GRQ+ ++ +G+E ++++ +CG + EA ++ + + D+V A+
Sbjct: 420 VLEGGRQVH-ALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETD-RDDIVSLTAM 477
Query: 392 LAACKNHGN----IEVAERVVKEIIALEPNNHGVYVVLS 426
+ HG I++ E+ +K + P++ VL+
Sbjct: 478 INGYAEHGKSKEAIDLFEKSLK--VGFSPDSVTFISVLT 514
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 131/266 (49%), Gaps = 5/266 (1%)
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM--EGFEPNSVTLA 220
+ +L ARQVFD++ +R + WT +I GY + ++EA++LF M + P++ ++
Sbjct: 47 AGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVS 106
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
VL AC QS + GE +H + +G++L+ MY + G + K+ +F MP R
Sbjct: 107 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFR 166
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
N TW A+I+GL G +E L F ++ + + + TF L AC + G+QI
Sbjct: 167 NAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIH 226
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ V G + + + + CG++ + L + M + DVV W +L+ A G+
Sbjct: 227 THVI-VRGFDATVWVANSLATMYTECGEMRDGLCLFENMS-ERDVVSWTSLIVAYNRIGH 284
Query: 401 IEVA-ERVVKEIIALEPNNHGVYVVL 425
E A E +K + P N + +
Sbjct: 285 EEKAVETFIKMRNSQVPPNEQTFATM 310
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 239/431 (55%), Gaps = 9/431 (2%)
Query: 3 LKCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS 62
++C+ P + S+LA +C +Q+H ++ S + + S L+ A
Sbjct: 261 VECNQYTFPTILTACSSVLA-RCFG----EQVHGFIVKSGFGSNVYVQSALVDMYA--KC 313
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GDL A + +++ + WN+L+ ++A+ L+ NM + +TF VL
Sbjct: 314 GDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVL 373
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
C V S+N K +H + K+G + V N LV Y+ + D++ A VF+++ + +
Sbjct: 374 NCCV-VGSINP-KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVI 431
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT++++GYAQ+ E+L +F M + G P+ +AS+LSACA+ LE G++VH+
Sbjct: 432 SWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDF 491
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + +LV MY K G L A A+F SM +++ TW A+I G A +G +L
Sbjct: 492 IKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSL 551
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
+ + P+ ITF+G+L AC HAG +D GR+ F M +VYGI+P EHY CM+DL
Sbjct: 552 KFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDL 611
Query: 363 LGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVY 422
GR GK+ EA++L+ +M KPD +W +LL+AC+ H N+E+AER + LEP N Y
Sbjct: 612 FGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPY 671
Query: 423 VVLSNMYAEAE 433
V+LSNMY+ +
Sbjct: 672 VMLSNMYSASR 682
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 214/450 (47%), Gaps = 55/450 (12%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LS + CK M L+ IH ++ + + ++LL LS SG ++ A +LF+ +
Sbjct: 38 LSFPHNPCKFMAFLRSIHT--TTAASYESIYQTNQLLN--QLSKSGQVNDARKLFDKMPQ 93
Query: 78 PNHFMWNTLIRA--QASSLNPDKAIF-----------------------------LYMNM 106
+ + WNT+I + L + +F L+ +M
Sbjct: 94 KDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSM 153
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
R G+ +Q T VL+ CS++ + + IH V K+G + ++ VV LV Y+ +
Sbjct: 154 RLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCV 213
Query: 167 NNARQVFD--EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
+ A +F E + +WT M++GYAQ+ +A+ F M +G E N T ++L+
Sbjct: 214 SEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILT 273
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC+ GE+VH F+ GF + +ALV MY K G L AK + ++M + ++ +
Sbjct: 274 ACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVS 333
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN+++ G HG EEAL LF+ + + +D TF VL+ CC G I+ K
Sbjct: 334 WNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN-CCVVGSINP--------K 384
Query: 345 RVYG--IEPKIEHY----GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
V+G I+ E+Y +VD+ + G + A + ++M+ K DV+ W +L+ +
Sbjct: 385 SVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEK-DVISWTSLVTGYAQN 443
Query: 399 GNIEVAERVVKE--IIALEPNNHGVYVVLS 426
+ E + ++ + + + P+ V +LS
Sbjct: 444 NSHEESLKIFCDMRVTGVNPDQFIVASILS 473
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 226/403 (56%), Gaps = 3/403 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H + +D + LL + SG+++ A + F + + W+ +I A
Sbjct: 225 KSVHGCALKVCYDRDLYVGIALLEL--YTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYA 282
Query: 92 SSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
S +A+ L+ MR++ PN TF VL+AC+++ LN QIH+ V K GLD ++
Sbjct: 283 QSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNV 342
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V N L+ Y+ ++ N+ ++F + W T+I GY Q +AL LF ML
Sbjct: 343 FVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGL 402
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
+P VT +SVL A A LE G ++H + +++ +L+ MY K G + A
Sbjct: 403 DIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDA 462
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+ FD M +++ +WNA+I G + HG EAL+LF +++ PN +TFVGVLSAC +A
Sbjct: 463 RLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNA 522
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
G +D GR F SM + YGIEP IEHY CMV LLGR G+ EA +LI + ++P V++W A
Sbjct: 523 GLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRA 582
Query: 391 LLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
LL AC H N+++ + + ++ +EP + +V+LSNMYA A+
Sbjct: 583 LLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAK 625
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 201/385 (52%), Gaps = 5/385 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K +H ++ D FA + LL G L A++LF+ + N + TL + +
Sbjct: 23 KSLHCHILKHGASLDLFAQNILLN--TYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFS 80
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S +A L + + R G+ NQ FT +LK ++ + C +H +V K G D
Sbjct: 81 RSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAF 140
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V L+ YSV +++ ARQVFD I + + WT M++ YA+++ ++L+LF QM + G
Sbjct: 141 VGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMG 200
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+ PN+ T+++ L +C ++G+ VH ++ +G AL+ +YTK+G +A+A+
Sbjct: 201 YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQ 260
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-IVPNDITFVGVLSACCHA 330
F+ MP+ ++ W+ MIS A ++EAL+LF ++ + +VPN+ TF VL AC
Sbjct: 261 QFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASL 320
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGA 390
+++G QI + +V G++ + ++D+ +CG++ + +L K +V W
Sbjct: 321 VLLNLGNQIHSCVLKV-GLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVA-WNT 378
Query: 391 LLAACKNHGNIEVAERVVKEIIALE 415
++ G+ E A + ++ L+
Sbjct: 379 IIVGYVQLGDGEKALNLFSNMLGLD 403
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 4/281 (1%)
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ H++ +L+ R N K +H H+ K G LDL N L+ Y L +A ++F
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
DE+ + T+ G+++S + A L ++ EG+E N ++L +
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
VH +V G + A +GTAL+ Y+ G + A+ +FD + +++ +W M++ A
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPK 352
+ E++L LF ++ PN+ T L +C VG+ + G ++K Y +
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
+ +++L + G++ EA++ + M K D++ W +++
Sbjct: 242 VG--IALLELYTKSGEIAEAQQFFEEMP-KDDLIPWSLMIS 279
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 229/405 (56%), Gaps = 15/405 (3%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
++ H + ++D F + L+ A S + LS A ++F+ + + + WNT + A
Sbjct: 223 VRAAHTHVFKLGSVEDTFVGNALID--AYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAM 280
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
D A ++ M P + T ++ ++ + G +
Sbjct: 281 VRKGEVDAARSMFDEM------PEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRN--- 331
Query: 151 HVVN--CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
VV+ +V Y D+ AR +FD++ + L WT M+S AQ EA LF +M
Sbjct: 332 -VVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMK 390
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
E + V + S+L+ACA+SGCL LG+++H V+ R ++ AL+ M+ K G +
Sbjct: 391 EAAIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVN 450
Query: 269 KAKALFDS-MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A +FD+ + E++ +WN +I G A HGH E+AL+LF +++++ P+ +T + VLSAC
Sbjct: 451 RADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSAC 510
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G ++ GR+ F +M+ YGI+P+IEHYGCMVDLLGR G + EA ++IK M W+P+ V+
Sbjct: 511 THMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVI 570
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WG+LL+AC+ H N+E AE E+ L+P+N G Y VLSN+YAEA
Sbjct: 571 WGSLLSACRLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAEA 615
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 195/394 (49%), Gaps = 23/394 (5%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCAL---SSSGDLSYATRLFNS 74
L+ L + ++++HAQ++ +D AAS+L+A AL + ++
Sbjct: 107 LASLPHGLPRLRHVQELHAQVLRQGLHRDPRAASKLIASYALLRRVPACRCVFSAAAAPP 166
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM---RRTGFAPNQHTFTFVLKACSNVRSL 131
+ NTL+RA A + P A+ ++++M +R F T++F++KA + +
Sbjct: 167 FAPSTALLANTLLRAYALNSLPHAALAVFVDMPLRQRDTF-----TYSFLIKALATA-GV 220
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ HTHV K G D V N L+ YS + L++A++VFDE+ R + W T ++
Sbjct: 221 TPVRAAHTHVFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAM 280
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGA 251
+ + A +FD+M E ++V+ ++L A++G E E +F +M G +
Sbjct: 281 VRKGEVDAARSMFDEMP----EKDTVSWNTMLDGYAKAG--EAEEAFELFQRMPGRNV-- 332
Query: 252 ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE 311
+ + +V Y K G + A+ +FD MP +N+ TW M+S A G EA LF ++++
Sbjct: 333 VSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEA 392
Query: 312 QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK-RVYGIEPKIEHYGCMVDLLGRCGKVL 370
I + + V +L+AC +G + +G++I ++ R G + ++D+ +CG V
Sbjct: 393 AIELDVVAVVSILAACAESGCLALGKRIHRHVRQRKLGRSTLV--CNALMDMFCKCGCVN 450
Query: 371 EAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
A+ + + + D V W ++ HG+ E A
Sbjct: 451 RADYIFDTEIVEKDSVSWNIIIGGFAMHGHGEKA 484
>gi|115479131|ref|NP_001063159.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|50251469|dbj|BAD28534.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|50252346|dbj|BAD28379.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631392|dbj|BAF25073.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|215717103|dbj|BAG95466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736827|dbj|BAG95756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 503
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 211/358 (58%), Gaps = 6/358 (1%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR--SLNCCKQIHTH 140
+N L+ ASS +P A L++ +RR G P+ HT VLKA + + SL +H+
Sbjct: 72 FNLLLPPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSE 131
Query: 141 VSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
K GL ++V N L+ YS L A QVFDE+ RT+ W T ++ A + R
Sbjct: 132 AVKDGLASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGRHEL 191
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
+ LF +ML G P+ T +LSA A+ G L LG+ H V R +M LGTA V+
Sbjct: 192 CVELFAEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVN 251
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY+K ++ A LF+ MP RN+ TW AMI G A +G A+EAL+LF +++ +I+PN +T
Sbjct: 252 MYSKCATVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVT 311
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+G+L AC HAG +D GR+ F M+ VYGI P + HY MVD+LGR G + EA + + M
Sbjct: 312 FLGLLCACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGM 371
Query: 380 VWKPDVVMWGALLAACKNHGN---IEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
+ D V+W LLAAC+ H + IE+ ++V +++ LEP G YV++SN+Y E S
Sbjct: 372 PVEADPVVWRTLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGS 429
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 244/429 (56%), Gaps = 15/429 (3%)
Query: 25 CKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C S+H L Q+HA I ++ D + + L+ A L+ A ++F+ + +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC--LTDARKVFDIFAAADVV 417
Query: 82 MWNTLIRAQA---SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
++N +I + + +A+ ++ +MR P+ TF +L+A +++ SL KQIH
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ K GL+LD+ + L+ YS L ++R VFDE++ + L +W +M +GY Q
Sbjct: 478 GLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENE 537
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LF ++ + P+ T A++++A ++LG++ H + RG E + AL+
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY K G+ A FDS R++ WN++IS A+HG ++AL + K+ E I PN I
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TFVGVLSAC HAG ++ G + F M R +GIEP+ EHY CMV LLGR G++ +A ELI++
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EA 432
M KP ++W +LL+ C GN+E+AE + I +P + G + +LSN+YA EA
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776
Query: 433 ESMKMQLEI 441
+ ++ ++++
Sbjct: 777 KKVRERMKV 785
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 191/369 (51%), Gaps = 9/369 (2%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+H +H Q+I+ D + ++ L+ S +G + YA ++F + N W+T++
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINL--YSRAGGMVYARKVFEKMPERNLVSWSTMV 117
Query: 88 RAQASSLNPDKAIFLYMNMRRT-GFAPNQHTFTFVLKACSNV--RSLNCCKQIHTHVSKS 144
A ++++ +++ RT +PN++ + ++ACS + R Q+ + + KS
Sbjct: 118 SACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKS 177
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G D D++V L+ Y +++ AR VFD + ++ WTTMISG + R+ +L LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
Q++ + P+ L++VLSAC+ LE G+++H + G EM A L L+ Y K
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G + A LF+ MP +NI +W ++SG + +EA++LF + K + P+ +L
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 325 SACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
++C + G Q+ ++K G + + + ++D+ +C + +A ++ +
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTN--SLIDMYAKCDCLTDARKVFD-IFAAA 414
Query: 384 DVVMWGALL 392
DVV++ A++
Sbjct: 415 DVVLFNAMI 423
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 179/365 (49%), Gaps = 7/365 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+ + ++ S +D + + L+ F G++ YA +F+++ + W T+I
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDF--YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
++ L+ + P+ + + VL ACS + L KQIH H+ + GL++D +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+N L+ Y + A ++F+ + N+ + WTT++SGY Q+ EA+ LF M G
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ +S+L++CA L G +VH + + + +L+ MY K L A+
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 273 LFDSMPERNIATWNAMISG---LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
+FD ++ +NAMI G L + EAL++FR + I P+ +TFV +L A
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ + +QI G M + YG+ I ++D+ C + ++ + M K D+V+W
Sbjct: 467 LTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWN 524
Query: 390 ALLAA 394
++ A
Sbjct: 525 SMFAG 529
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
A +L A L VH + + G E+ L L+++Y++ G + A+ +F+ MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFVGVLSACCHAGFIDVGR 337
ERN+ +W+ M+S HG EE+L +F + + + PN+ + AC +G GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGR 164
Query: 338 QIFGSMKRVY---GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ ++ G + + ++D + G + + L+ + + V W +++
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNI-DYARLVFDALPEKSTVTWTTMISG 223
Query: 395 CKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
C G V+ ++ +++ + P+ + + VLS
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 231/409 (56%), Gaps = 4/409 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ + +++H MI + + + +RL+ + L A +F+ + N W
Sbjct: 76 RAIREGQRVHTHMIKTCYLPSVYLRTRLIVL--YNKCDCLGDARGMFDEMPQRNVVSWTA 133
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I A + +A+ L++ M R+ PN TF +L +C +QIH+ K
Sbjct: 134 MISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRN 193
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ + V + L+ Y+ S + +A VF + R + T +ISGYAQ EAL LF
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
Q+ +EG NSVT ASVL+A + L G++VH V G +L +L+ MY+K G
Sbjct: 254 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCG 313
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVL 324
+ A+ +FDSMPER +WNAM+ G + HG A E L+LF+ + +E ++ P+ IT++ VL
Sbjct: 314 NVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVL 373
Query: 325 SACCHAGFIDVGRQIFGSM-KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
S C H D+G +IF +M GIEP I HYGC+VDLLGR G+V EA + IK+M + P
Sbjct: 374 SGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVP 433
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG+LL +C+ H ++E+ V ++++ LEP N G YV+LSN+YA A
Sbjct: 434 TAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASA 482
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EAL+ QM + G E S+L+ C + G++VH + + L T L
Sbjct: 47 KEALL---QMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRL 103
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ +Y K L A+ +FD MP+RN+ +W AMIS + G A EAL+LF ++ + PN
Sbjct: 104 IVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNH 163
Query: 318 ITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
TF +L++C + + GRQI ++KR Y E + ++D+ + G++ +A +
Sbjct: 164 FTFATILTSCYGSLGFETGRQIHSIAIKRNY--ESHMFVGSSLLDMYAKSGRICDAHGVF 221
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ + DVV A+++ G E A ++ +++
Sbjct: 222 HCLPER-DVVACTAIISGYAQMGLDEEALKLFRQL 255
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 239/428 (55%), Gaps = 9/428 (2%)
Query: 11 PPLPI----PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDL 65
PP + L C S+ IHA++I S D F RL++ + L D
Sbjct: 57 PPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDED- 115
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMR-RTGFAPNQHTFTFVLKA 124
A RLF+ + + + WN+L+ + + + MR +G PN+ T V+ A
Sbjct: 116 --AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 173
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+++ +L+ K +H V K G+ VVN L+ Y L+ A Q+F+E+ R+L W
Sbjct: 174 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 233
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
+M+ + + A + + LF+ M G P+ T+ ++L AC +G E +H ++
Sbjct: 234 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR 293
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
GF I+ TAL+++Y K G L ++ +F+ + +R+ W AM++G A H EA+ L
Sbjct: 294 CGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKL 353
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F + KE + + +TF +LSAC H+G ++ G++ F M VY +EP+++HY CMVDLLG
Sbjct: 354 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG 413
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
R G++ +A ELIK M +P +WGALL AC+ +GN+E+ + V +++++L+P++H Y++
Sbjct: 414 RSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIM 473
Query: 425 LSNMYAEA 432
LSN+Y+ A
Sbjct: 474 LSNIYSAA 481
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 221/399 (55%), Gaps = 33/399 (8%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLK 123
L A ++F+ + + W TL+ A + D+A L+ M G PN T +
Sbjct: 194 LDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVS 253
Query: 124 ACSNVRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVRC-------------------- 159
A + L +H +V++ G+ +LD +V+ +C
Sbjct: 254 AIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYS 313
Query: 160 -------YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
Y+ DL +A Q+F ++ R + W+ MI+ Y+Q + EA+ LF +M+ G
Sbjct: 314 WTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGV 373
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHV-FVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P TL SVLSACAQ GCL+LG ++ ++ + LG AL+ M+ K G + +A
Sbjct: 374 DPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEAS 433
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LFD M ERN+ +WN MI A HG +EEA+ LF +L+ E IVP+ ITF+G+L++C H+G
Sbjct: 434 KLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSG 493
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ GR+ F M+ Y IEP++EHY CM+DLLG+ G + EA E+ + M + D WGAL
Sbjct: 494 LVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGAL 553
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L AC+ HGN+E+ V +++ L+P++ G+YV++S +YA
Sbjct: 554 LNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYA 592
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 210/436 (48%), Gaps = 42/436 (9%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL + C S +L Q+HA + ++ + F A LAFCALS+ L++A +
Sbjct: 37 PLLSLL-ESCASFRRLLQLHALLTVTGLAGNGFPAFGFLAFCALSTPPRLAHAAAILARA 95
Query: 76 Q-SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR----- 129
PN +M T++R + P +A+ L+ + R + TF F +KA +
Sbjct: 96 SPGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHG 155
Query: 130 -SLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + + IH K G + + V N LV Y+ L++A +VFDE+ R + WTT+
Sbjct: 156 GTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTL 215
Query: 188 ISGYAQSFRANEALMLFDQMLM-EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
+ GYA++ A+EA LF +M++ G PN+VTL + +SA Q G L G +H +V G
Sbjct: 216 VDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGG 275
Query: 247 FEMGAILGTALVHM-------------------------------YTKNGALAKAKALFD 275
L ALV M Y K G L A+ LF
Sbjct: 276 VARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFK 335
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
MP RN+ +W+ MI+ + EEA+ LFR++ + P D T V VLSAC G +D+
Sbjct: 336 DMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDL 395
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
GR I+ + I + ++D+ +CG V EA +L M + +VV W ++ A
Sbjct: 396 GRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAER-NVVSWNTMIMAH 454
Query: 396 KNHGNIEVAERVVKEI 411
HG E A R+ +++
Sbjct: 455 AVHGQSEEAIRLFEQL 470
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 139/281 (49%), Gaps = 13/281 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + +++ M ++D ++ + ++ A + GDL A +LF + N W
Sbjct: 292 KCGCVRYAREVFDGM----EVKDVYSWTSMVN--AYAKCGDLESAEQLFKDMPRRNVVSW 345
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH-THVS 142
+ +I A + P++A++L+ M G P T VL AC+ + L+ + I+ ++
Sbjct: 346 SCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIV 405
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+ + L +++ N L+ ++ D+ A ++FDE+ R + W TMI +A ++ EA+
Sbjct: 406 SNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIR 465
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF---EMGAILGTALVH 259
LF+Q+ E P+ +T +L++C+ SG + G + F +M F E ++
Sbjct: 466 LFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRR--YFKEMEMFYRIEPRVEHYACMID 523
Query: 260 MYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAE 299
+ K G L +A + MP E + A W A+++ HG+ E
Sbjct: 524 LLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVE 564
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 227/417 (54%), Gaps = 7/417 (1%)
Query: 25 CKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C + +L + +H ++ + D F S L+ G+++ A +F +
Sbjct: 130 CAAARELWLGRAVHGDVVRFALAGDGFVHSALITM--YFQEGEVADAELVFAESHGSSRT 187
Query: 82 M--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+ W +++ + +A+ L+ M G PN+ T L L+ + +H
Sbjct: 188 VVSWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHG 247
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
V + G D ++ + N L+ Y + A+ +F+ + R+L W TM++ Y Q E
Sbjct: 248 FVIRLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVE 307
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
A+ F +ML E + VTL SVLSACA+SG L+ G+ VH + G + A +G LV
Sbjct: 308 AIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVD 367
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY K G +A A+ +FD + R++ +W+AMIS A+HG +EEAL LF ++ E + PN T
Sbjct: 368 MYAKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFT 427
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F VL AC H+G ++ G + F S+ Y + P +EHY CMVD+LGR G+++EA E+I+ M
Sbjct: 428 FTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGM 487
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
PD +WGA LA CK HGN+E+AE V +++ N+ YV++SNMY EA +K
Sbjct: 488 SLCPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLK 544
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 207/385 (53%), Gaps = 9/385 (2%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
S+ L IHA+ I+ + A+ LLA A +S L+YA R+F++ + +MWNTL
Sbjct: 33 SLRALLPIHARAIVLGVSANPAFATSLLAGVAPAS---LAYARRVFDATPVRDAYMWNTL 89
Query: 87 IRAQASSLNPDKA--IFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+RA + S A + LY MR G AP+ +T+ VL AC+ R L + +H V +
Sbjct: 90 LRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVRF 149
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRANEALM 202
L D V + L+ Y ++ +A VF E +RT+ WT+M++GY Q++ EA+
Sbjct: 150 ALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAVA 209
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF M+ EG PN +TL S L L+ GE VH FV GF+ L AL+ MY
Sbjct: 210 LFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIPLANALIAMYG 269
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G++ A+ LF+ MP R++A+WN M++ H EA+ FR++ E++ + +T V
Sbjct: 270 KCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFDCVTLVS 329
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
VLSAC +G + G+ + + R +G++ +VD+ +CG++ A + + +
Sbjct: 330 VLSACARSGALQTGKWVH-ELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMR 388
Query: 383 PDVVMWGALLAACKNHGNIEVAERV 407
VV W A+++A NHG E A ++
Sbjct: 389 -SVVSWSAMISAYANHGASEEALKL 412
>gi|125605677|gb|EAZ44713.1| hypothetical protein OsJ_29343 [Oryza sativa Japonica Group]
Length = 505
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 211/358 (58%), Gaps = 6/358 (1%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR--SLNCCKQIHTH 140
+N L+ ASS +P A L++ +RR G P+ HT VLKA + + SL +H+
Sbjct: 74 FNLLLPPLASSPDPSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSE 133
Query: 141 VSKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
K GL ++V N L+ YS L A QVFDE+ RT+ W T ++ A + R
Sbjct: 134 AVKDGLASAVVYVPNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGRHEL 193
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
+ LF +ML G P+ T +LSA A+ G L LG+ H V R +M LGTA V+
Sbjct: 194 CVELFAEMLEAGSVPDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVN 253
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDIT 319
MY+K ++ A LF+ MP RN+ TW AMI G A +G A+EAL+LF +++ +I+PN +T
Sbjct: 254 MYSKCATVSYALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVT 313
Query: 320 FVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
F+G+L AC HAG +D GR+ F M+ VYGI P + HY MVD+LGR G + EA + + M
Sbjct: 314 FLGLLCACSHAGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGM 373
Query: 380 VWKPDVVMWGALLAACKNHGN---IEVAERVVKEIIALEPNNHGVYVVLSNMYAEAES 434
+ D V+W LLAAC+ H + IE+ ++V +++ LEP G YV++SN+Y E S
Sbjct: 374 PVEADPVVWRTLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGS 431
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 143/301 (47%), Gaps = 11/301 (3%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A S+ G L A ++F+ + WNT + A A + + + L+ M G P+ T
Sbjct: 153 AYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGRHELCVELFAEMLEAGSVPDPTT 212
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F +L A + + +L K H V LD+ L + V YS + ++ A ++F+ +
Sbjct: 213 FVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVNMYSKCATVSYALRLFERMP 272
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R + WT MI G+AQ+ A EAL LFD+M + PN VT +L AC+ +G ++ G +
Sbjct: 273 ARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCACSHAGLVDEGRR 332
Query: 238 -VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASH 295
H + G +A+V + +NG L +A MP E + W +++ H
Sbjct: 333 FFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGMPVEADPVVWRTLLAACQLH 392
Query: 296 GHAEEALDLFRKLEKE--QIVPNDI-TFVGVLSACCHAGFID---VGRQIF--GSMKRVY 347
+++ +++ K++ + ++ P +V V + C G D R++ G MK+V
Sbjct: 393 S-SKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGSWDEAAKARRVMREGGMKKVA 451
Query: 348 G 348
G
Sbjct: 452 G 452
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 247/454 (54%), Gaps = 42/454 (9%)
Query: 15 IPPLSLLADKCKSMHQL-KQIHAQMIISSRIQDHFAASRLLAF----------------C 57
+PPL A K + + Q+HAQ + + D F + LLA C
Sbjct: 97 LPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSC 156
Query: 58 A--------------LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY 103
A G++ A R+F+ + N W+T++ A++ D A ++
Sbjct: 157 AGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMF 216
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
M G N T+ ++ + L +++ + +L N ++R YSV+
Sbjct: 217 DRMPAIG--RNVVTWNSMVTGFARHGLLPLARKMFDEMPVR----NLVSWNAMLRGYSVN 270
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASV 222
SD++ AR++FD + + + WT MISGYAQ+ R + L LF M E +PN VT+ SV
Sbjct: 271 SDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSV 330
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAI--LGTALVHMYTKNGALAKAKALFDSMPER 280
LSACA LE G VH F+ + LG AL+ MY K G A +F+S+ +
Sbjct: 331 LSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRK 390
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
N++ WNA+I+ LA +G+A++++D F ++++ PNDITFVGVL+AC H G +D GR+ F
Sbjct: 391 NVSAWNALITRLAMNGNAQDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCF 450
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
SM G++P+++HYGCMVD+LGR G + EAEELI+ M PDV+++GALL AC+ H
Sbjct: 451 QSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKR 510
Query: 401 IEVAERVVKEIIALEPN--NHGVYVVLSNMYAEA 432
+VAERV EI +L N G +V++S++YA A
Sbjct: 511 FDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAA 544
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 169/357 (47%), Gaps = 42/357 (11%)
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL-NCCKQIHT 139
F+ N LIRA ASS +P + + ++ R G P++ T +L + + + Q+H
Sbjct: 60 FLHNILIRASASSASPRLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHA 119
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSD--------------------------------LN 167
+ G D+ VVN L+ Y D +
Sbjct: 120 QAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEME 179
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
+A++VFDE+ R W+TM+ GYA + + A +FD+M G N VT S+++ A
Sbjct: 180 SAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RNVVTWNSMVTGFA 237
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
+ G L L K+ + +R + A++ Y+ N + A+ LFD MPE+++ +W
Sbjct: 238 RHGLLPLARKMFDEMPVRNL----VSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTC 293
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
MISG A G ++ L+LFR ++ E V PN++T V VLSAC + ++ GR + + +
Sbjct: 294 MISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKH 353
Query: 347 YGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ + G ++D+ +CG+ A ++ + K +V W AL+ +GN +
Sbjct: 354 KMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRK-NVSAWNALITRLAMNGNAQ 409
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 70/323 (21%)
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL-ELGEKVHVFVKMR 245
+I A S + F +L G P+ TL +L + + G +VH R
Sbjct: 65 LIRASASSASPRLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRR 124
Query: 246 GFEMGAILGTALVHMY--------------------------------TKNGALAKAKAL 273
GF + AL+ MY K G + AK +
Sbjct: 125 GFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRV 184
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
FD MP RN +W+ M+ G A+ G + A ++F ++ I N +T+ +++ G +
Sbjct: 185 FDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPA--IGRNVVTWNSMVTGFARHGLL 242
Query: 334 DVGRQIF-----------GSMKRVYGI---------------EPKIEHYGCMVDLLGRCG 367
+ R++F +M R Y + E + + CM+ + G
Sbjct: 243 PLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAG 302
Query: 368 KVLEAEELIKRMVW----KPDVVMWGALLAACKNHGNIE----VAERVVKEIIALEPNNH 419
+ + EL + M +P+ V ++L+AC N +E V + K + L N +
Sbjct: 303 RYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLN-NEY 361
Query: 420 GVYVVLSNMYAEAESMKMQLEIL 442
+ L +MYA+ + ++I
Sbjct: 362 NLGAALIDMYAKCGRTDIAVKIF 384
>gi|449434194|ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 436
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 216/381 (56%), Gaps = 38/381 (9%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
W IR A SL+ KA+ Y M R + + F+LKAC++ +L+ +H H++
Sbjct: 27 WALRIR-NAPSLH--KALAFYSQMHRQSVPHDSFSILFMLKACASSNNLSILHHLHAHIT 83
Query: 143 KSGLDLDLHVV------------------------------NCLVRCYSVSSDLNNARQV 172
K G + V N ++ YS + D++ ARQ+
Sbjct: 84 KLGFTTHVFVATSLLHSYVLHSFQLARLVFDEMPHKNSVTWNTMISGYSKAGDVHTARQL 143
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FD + +R L W+ MI+ Y + AL+LF M++ G P+ + S+L+ CA G L
Sbjct: 144 FDRMPSRDLASWSAMIAAYINNRNYRGALLLFQDMIINGINPDQMAAGSILNGCAHMGSL 203
Query: 233 EL--GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
L G+ VH FV +E+ LGT LV MY K G L A +F+ M ERN+ TW A+I
Sbjct: 204 GLLAGKSVHGFVVKNRWELNLELGTVLVDMYAKCGFLKYACQIFNLMSERNVRTWTALIC 263
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
GLA HG +EAL LF + E + PN+ TF GVLSAC HAG + GR+ F ++ G+E
Sbjct: 264 GLAHHGCCKEALVLFETMRHEGVEPNEFTFTGVLSACVHAGLVQEGRKYFNMIEEC-GLE 322
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
+I+HYGC VDLLGR G + EA +IK M +P+V++W +LL+ACK H + ++AERV+++
Sbjct: 323 IRIQHYGCFVDLLGRSGLLEEAYGVIKSMRLEPNVIVWSSLLSACKQHKSFDLAERVIEQ 382
Query: 411 II-ALEPNNH-GVYVVLSNMY 429
I+ +EP+NH GVY ++S++Y
Sbjct: 383 ILEKIEPDNHAGVYSLVSDLY 403
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 134/264 (50%), Gaps = 10/264 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S +GD+ A +LF+ + S + W+ +I A ++ N A+ L+ +M G P+Q
Sbjct: 132 SKAGDVHTARQLFDRMPSRDLASWSAMIAAYINNRNYRGALLLFQDMIINGINPDQMAAG 191
Query: 120 FVLKACSNVRSLNCC--KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+L C+++ SL K +H V K+ +L+L + LV Y+ L A Q+F+ +
Sbjct: 192 SILNGCAHMGSLGLLAGKSVHGFVVKNRWELNLELGTVLVDMYAKCGFLKYACQIFNLMS 251
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
R + WT +I G A EAL+LF+ M EG EPN T VLSAC +G ++ G K
Sbjct: 252 ERNVRTWTALICGLAHHGCCKEALVLFETMRHEGVEPNEFTFTGVLSACVHAGLVQEGRK 311
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHG 296
++ G E+ V + ++G L +A + SM E N+ W++++S H
Sbjct: 312 YFNMIEECGLEIRIQHYGCFVDLLGRSGLLEEAYGVIKSMRLEPNVIVWSSLLSACKQH- 370
Query: 297 HAEEALDLF-RKLEK--EQIVPND 317
++ DL R +E+ E+I P++
Sbjct: 371 ---KSFDLAERVIEQILEKIEPDN 391
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 216/403 (53%), Gaps = 35/403 (8%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFV 121
G + A F + + WN++I +A+ ++ M R + +P++ T V
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASV 285
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLV----RCYSVSS------------- 164
L AC+N+ L +QIH+H+ +G D+ V+N L+ RC V +
Sbjct: 286 LSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 165 ----------------DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
D+N A+ +FD +++R + WT MI GY Q EA+ LF M+
Sbjct: 346 KIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMV 405
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
E PNS TLA++LS + L G+++H G + AL+ MY K G++
Sbjct: 406 GEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSIT 465
Query: 269 KAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A FD + ER+ +W +MI LA HGHAEEAL+LF + E + P+ IT+VGV SAC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAG ++ GRQ F MK V I P + HY CMVDL GR G + EA+E I++M +PDVV
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
WG+LL+AC+ + NI++ + + ++ LEP N G Y L+N+Y+
Sbjct: 586 WGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYS 628
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 188/436 (43%), Gaps = 75/436 (17%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A + GD+ + F+ + + W T+I + KAI + M R G P+Q T
Sbjct: 89 AYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFT 148
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD--- 174
T VL + + R L K++H+ + K GL ++ V N L+ Y+ D A+ VFD
Sbjct: 149 LTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV 208
Query: 175 ----------------------------EIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
++ R + W +MISGY Q AL +F +
Sbjct: 209 VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSK 268
Query: 207 MLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
ML + P+ TLASVLSACA L +GE++H + GF++ I+ AL+ MY++ G
Sbjct: 269 MLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 266 A---------------------------------LAKAKALFDSMPERNIATWNAMISGL 292
+ +AK +FDS+ +R++ W AMI G
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGY 388
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR---VYGI 349
HG EA++LFR + E+ PN T +LS + G+QI GS + +Y +
Sbjct: 389 EQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSV 448
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
++ + + G + A + + D V W +++ A HG+ E A + +
Sbjct: 449 SVS----NALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 410 EII--ALEPNNHGVYV 423
++ L P +H YV
Sbjct: 505 TMLMEGLRP-DHITYV 519
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 184/420 (43%), Gaps = 106/420 (25%)
Query: 112 APNQHTFTFVLKACSNV--RSLN------CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
AP + + +L+ C+N+ +S+N + +H V KSGL ++++N L+ YS +
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62
Query: 164 SDLNNARQVFDEIRNRT---LNV----------------------------WTTMISGYA 192
+AR++FDE+ RT N WTTMI GY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ ++A+ + +M+ EG EP+ TL +VL++ A + CLE G+KVH F+ G
Sbjct: 123 NIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVS 182
Query: 253 LGTALVHMYTKNGALAKAKALFD-------------------------------SMPERN 281
+ +L++MY K G AK +FD M ER+
Sbjct: 183 VSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIF 340
I TWN+MISG G+ ALD+F K+ ++ ++ P+ T VLSAC + + +G QI
Sbjct: 243 IVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIH 302
Query: 341 GSM-------------------KRVYGIEP-------------KIEHYGCMVDLLGRCGK 368
+ R G+E KIE + ++D + G
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALE--PNNHGVYVVLS 426
+ EA+ + + DVV W A++ + HG A + + ++ E PN++ + +LS
Sbjct: 363 MNEAKNIFDSLK-DRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLS 421
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 231/407 (56%), Gaps = 3/407 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ + +Q+HA+MI + F +RL+ G L A + + + + W T
Sbjct: 24 RALWEGRQVHARMITARYRPAVFLGTRLVTMYV--RCGALDDARNVLDRMPERSVVSWTT 81
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + + +A+ L++ M R G PN++T VL +CS +S+ KQ+H+ + K+
Sbjct: 82 MISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 141
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ + V + L+ Y+ S ++ AR+VFD + R + T +ISGYAQ EAL LF
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFR 201
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
Q+ EG + N VT ++++A + L+ G++VH + + L +L+ MY+K G
Sbjct: 202 QLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCG 261
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
L ++ +FD+M ER++ +WNAM+ G HG E + LF+ L KE + P+ +T + VLS
Sbjct: 262 KLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLS 320
Query: 326 ACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
C H G +D G IF ++ + HYGC++DLLGR G++ +A LI+ M ++
Sbjct: 321 GCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTP 380
Query: 386 VMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+WG+LL AC+ H N+ V E V ++++ +EP N G YV+LSN+YA A
Sbjct: 381 SIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 427
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER 280
+ ++AC + L G +VH + + LGT LV MY + GAL A+ + D MPER
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
++ +W MISG + EALDLF K+ + +PN+ T VL++C I G+Q+
Sbjct: 75 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ + E + ++D+ + + EA + + + DVV A+++ G
Sbjct: 135 SLLVKT-NFESHMFVGSSLLDMYAKSENIQEARRVFDTLPER-DVVSCTAIISGYAQKGL 192
Query: 401 IEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQN 460
E A + ++ +Y+E MQ V F L +A L +
Sbjct: 193 DEEALDLFRQ-----------------LYSEG----MQCN----HVTFTTLVTALSGLAS 227
Query: 461 PDFESPPTNLTPNRSTPFVLLNGNNTIPGWTFEGTVQY 498
D+ L + PF + N+ I ++ G + Y
Sbjct: 228 LDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLY 265
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 231/402 (57%), Gaps = 5/402 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+++HA +++ +D + + +L+ GD+ A +F+ + + WNT++
Sbjct: 144 RKVHALVVVGGLEEDVYVGNSILSM--YFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFV 201
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK---SGLDL 148
+ A ++ +MRR GF ++ T +L AC +V L K+IH +V + SG
Sbjct: 202 KNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVC 261
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
+ ++N ++ Y ++ AR++F+ +R + + W ++ISGY + A +AL LF +M+
Sbjct: 262 NGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMV 321
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
+ G P+ VT+ SVL+AC Q L LG V +V RG+ + ++GTAL+ MY G+L
Sbjct: 322 VVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLV 381
Query: 269 KAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
A +FD MPE+N+ M++G HG EA+ +F ++ + + P++ F VLSAC
Sbjct: 382 CACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACS 441
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H+G +D G++IF M R Y +EP+ HY C+VDLLGR G + EA +I+ M KP+ +W
Sbjct: 442 HSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVW 501
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
ALL+AC+ H N+++A +++ L P+ YV LSN+YA
Sbjct: 502 TALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYA 543
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 148/558 (26%), Positives = 266/558 (47%), Gaps = 62/558 (11%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
KS+ Q Q+HA + ++ + + LA C + G + YA +F+ I N F+WN+
Sbjct: 36 KSLTQALQLHAHVTTGGTLRRNTYLATKLAAC-YAVCGHMPYAQHIFDQIVLKNSFLWNS 94
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+IR A + +P +A+FLY+ M G P+ T+ FVLKAC ++ +++H V G
Sbjct: 95 MIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGG 154
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
L+ D++V N ++ Y D+ AR VFD + R L W TM+SG+ ++ A A +F
Sbjct: 155 LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFG 214
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI----LGTALVHMY 261
M +GF + TL ++LSAC L++G+++H +V +R E G + L +++ MY
Sbjct: 215 DMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYV-VRNGESGRVCNGFLMNSIIDMY 273
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
+++ A+ LF+ + +++ +WN++ISG G A +AL+LF ++ VP+++T +
Sbjct: 274 CNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVI 333
Query: 322 GVLSACCHAGFIDVGRQI-------------------------FGSMK---RVYGIEPKI 353
VL+AC + +G + GS+ RV+ P+
Sbjct: 334 SVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEK 393
Query: 354 EHYGC--MVDLLGRCGKVLEAEELIKRMVWK---PDVVMWGALLAACKNHGNIEVAERVV 408
C MV G G+ EA + M+ K PD ++ A+L+AC + G ++ + +
Sbjct: 394 NLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIF 453
Query: 409 KEI-----IALEPNNHGVYV-------VLSNMYAEAESMKMQLEILLVQVLFAGLASAAD 456
++ + P ++ V L YA E+MK++ + ++ L SA
Sbjct: 454 YKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPN----EDVWTALLSACR 509
Query: 457 ILQNPDFESPPT----NLTPNRSTPFVLL-NGNNTIPGWTFEGTVQYVTASQTIRLPDNG 511
+ +N L P+ + +V L N W V+ + A + +R P +
Sbjct: 510 LHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSY 569
Query: 512 HAIQLAQDGRINQTFAAD 529
++L + ++Q F D
Sbjct: 570 SFVELNK--MVHQFFVGD 585
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 238/425 (56%), Gaps = 10/425 (2%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C + ++K+IH ++ D F S L+ +G + A ++F + + +WN
Sbjct: 123 CCEVMEVKKIHGCLLKMGLELDVFVGSALVN--TYLKNGSMEDAQKVFGELSIRDVVLWN 180
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I A D+A+ ++ M G AP++ T T +L ++ L+ K +H V K
Sbjct: 181 AMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKM 240
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G D + V N L+ Y + +A +F+ I + + W ++IS + Q + L LF
Sbjct: 241 GYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLF 300
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF----EMGAI----LGTA 256
D+ML G P+ VT+ +VL AC+ L G ++H ++ + G E GA+ + A
Sbjct: 301 DKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNA 360
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
++ MY K G++ A +FDSM ++++A+WN MI G HG+A EAL +F ++ + + PN
Sbjct: 361 VMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPN 420
Query: 317 DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI 376
++T VGVLSAC HAGF+ GR M+ +G+ P IEHY C++D+LGR G + +A E++
Sbjct: 421 EVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIV 480
Query: 377 KRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
++M + + V+W ALL AC+ HGN E+AE ++++ LEP + G YV++SN+Y +
Sbjct: 481 QKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYE 540
Query: 437 MQLEI 441
LE+
Sbjct: 541 EVLEV 545
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 191/383 (49%), Gaps = 16/383 (4%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF-NSIQSPNHFMWN 84
+++++ KQ+H+ MI + + L+ S G + A +F + N F +N
Sbjct: 25 QNLNKGKQLHSLMITYGFSPSPPSITSLINM--YSKCGQMGEAILVFYDPCHERNVFAYN 82
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I S+ K Y MR G P+++TF V++ C V + K+IH + K
Sbjct: 83 AIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGCLLKM 139
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GL+LD+ V + LV Y + + +A++VF E+ R + +W MI+GYA+ +EAL +F
Sbjct: 140 GLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVF 199
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M ++G P+ T+ +LS A G L+ G+ VH V G++ G + AL+ MY K
Sbjct: 200 RRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKC 259
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
+ A +F+ + E++I +WN++IS G + L LF K+ I+P+ +T VL
Sbjct: 260 KHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVL 319
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEH--------YGCMVDLLGRCGKVLEAEELI 376
AC H + GR+I G M + G+ E+ ++D+ +CG + A ++
Sbjct: 320 PACSHLAALMHGREIHGYMI-INGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIF 378
Query: 377 KRMVWKPDVVMWGALLAACKNHG 399
M K DV W ++ HG
Sbjct: 379 DSMS-KKDVASWNIMIMGYGMHG 400
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 156/293 (53%), Gaps = 6/293 (2%)
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF-DEIRNRT 180
L++C++ ++LN KQ+H+ + G + L+ YS + A VF D R
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ + +ISG+ + A++ + +M +EG P+ T V+ C + +E+ +K+H
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE--VMEV-KKIHG 134
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
+ G E+ +G+ALV+ Y KNG++ A+ +F + R++ WNAMI+G A G +E
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL++FR++ + + P+ T G+LS G +D G+ + G + ++ G + + ++
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKM-GYDSGVSVSNALI 253
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
D+ G+C + +A +I M+ + D+ W ++++ + G+ + R+ +++
Sbjct: 254 DMYGKCKHIGDA-LIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 305
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 102/198 (51%), Gaps = 6/198 (3%)
Query: 215 NSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF 274
N + L +CA L G+++H + GF T+L++MY+K G + +A +F
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 275 -DSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
D ERN+ +NA+ISG S+G A + ++K+ E ++P+ TF V+ CC +
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV 129
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
++I G + ++ G+E + +V+ + G + +A+++ + + DVV+W A++
Sbjct: 130 ---KKIHGCLLKM-GLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIR-DVVLWNAMIN 184
Query: 394 ACKNHGNIEVAERVVKEI 411
G ++ A V + +
Sbjct: 185 GYAKIGCLDEALEVFRRM 202
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 241/453 (53%), Gaps = 38/453 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD---LSYATRLFNS 74
+S L KCKS+ LKQIHA ++ + Q +A + LL A S SYA +F +
Sbjct: 10 ISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKN 69
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV-RSLNC 133
+Q N FM+N++IR S P +AI Y+++ GF N++TF ++KAC+ V R L
Sbjct: 70 LQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELKR 129
Query: 134 CKQ-IHTHVSKSGLDLDLHVVNCLVRCYSV------------------------------ 162
+H HV G + D VV+ LV YS+
Sbjct: 130 IGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVWTVMVDGYGK 189
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
D+ +AR +FDE+ R + W+ M++ Y++ E L LF QM + PN +ASV
Sbjct: 190 VGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIASV 249
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
L+ACA G + G +H + K G + IL TALV MY+K G + A +F+ + ++
Sbjct: 250 LTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDA 309
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
WNAMISG A G+ ++L+LF K+ + TFV +L+AC HA ++ G + F
Sbjct: 310 GAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQ 369
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW---KPDVVMWGALLAACKNHG 399
M VY ++P+ EHY C+VDL+ R G V +AE+ ++ + D +WGA+L+AC+ +
Sbjct: 370 MYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYR 429
Query: 400 NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
NIE+ +R+ ++ AL + G V+ N+++EA
Sbjct: 430 NIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEA 462
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/403 (34%), Positives = 225/403 (55%), Gaps = 35/403 (8%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFV 121
G + A +F +++ + WN +I + D A+ + M + P++ T T V
Sbjct: 243 GRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSV 302
Query: 122 LKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS---------------VSSDL 166
L AC+N+R L KQ+H+++ ++G+ ++N L+ Y+ V +DL
Sbjct: 303 LSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADL 362
Query: 167 N------------------NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
N AR+VFD + NR + WT MI GY Q+ + +EA+ LF M+
Sbjct: 363 NVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMI 422
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
G EPNS TLA+VLSACA L G+++H E + A++ +Y ++G++
Sbjct: 423 RSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVP 482
Query: 269 KAKALFDSMPERN-IATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A+ +FD + R TW +MI LA HG E+A+ LF ++ + + P+ +T++GV SAC
Sbjct: 483 LARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSAC 542
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
HAGFID G++ + M +GI P++ HY CMVDLL R G + EA E I+RM PD V+
Sbjct: 543 THAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVV 602
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
WG+LLAAC+ N ++AE +++++++P+N G Y L+N+Y+
Sbjct: 603 WGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYS 645
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 205/489 (41%), Gaps = 103/489 (21%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY--ATRLFNSI--QSPNHFMWNTLI 87
+ IHA + + + + + LL++ A + G + A RLF+ I N F WN+L+
Sbjct: 45 RAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSLL 104
Query: 88 RAQASSLN-----------PDK--------------------AIFLYMNMRRTGFAPNQH 116
A S P++ A+ +++M G AP+Q
Sbjct: 105 SMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQF 164
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T VL +C+ + +++H+ V K GL + V N ++ Y D AR VF+ +
Sbjct: 165 MLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERM 224
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQM----------LMEGF-------------- 212
+ R+ + W M+S Y R + AL +F+ M ++ G+
Sbjct: 225 KVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFS 284
Query: 213 --------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF----------------- 247
EP+ T+ SVLSACA L++G+++H ++ G
Sbjct: 285 RMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKS 344
Query: 248 ----------------EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
++ I TAL+ Y K G +A+ +FD M R++ W AMI G
Sbjct: 345 GSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVG 404
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
+G +EA++LFR + + PN T VLSAC ++ G+QI R E
Sbjct: 405 YEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQ-EQ 463
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+ ++ + R G V A + ++ W+ + V W +++ A HG E A + +E+
Sbjct: 464 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEM 523
Query: 412 --IALEPNN 418
+ ++P+
Sbjct: 524 LRVGVKPDR 532
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 39/207 (18%)
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTK----NGALAKAKALFDSMP--ERNIATWNAM 288
G +H G + A L L+ Y + G +A+ LFD +P RN TWN++
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 289 IS-------------------------------GLASHGHAEEALDLFRKLEKEQIVPND 317
+S GL G +A+ F + E + P+
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
VLS+C +GR++ + ++ G+ + ++ + G+CG A + +
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKL-GLSSCVPVANSVLYMYGKCGDAETARAVFE 222
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVA 404
RM + + W A+++ + G +++A
Sbjct: 223 RMKVRSE-SSWNAMVSLYTHQGRMDLA 248
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 212/378 (56%), Gaps = 3/378 (0%)
Query: 60 SSSGDLSYATRLF--NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
S G L A +F N I + WN +I + S +A+ LY+ M + G + +T
Sbjct: 314 SKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYT 373
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL-HVVNCLVRCYSVSSDLNNARQVFDEI 176
+ V A + +SL + +H V K GLDL + V N + YS L + R+VFD +
Sbjct: 374 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 433
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
R + WTT+++ Y+QS EAL F M EGF PN T +SVL +CA LE G
Sbjct: 434 EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGR 493
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+VH + G + + +AL+ MY K G++ +A +FD + +I +W A+ISG A HG
Sbjct: 494 QVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHG 553
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
E+AL LFR++E I N +T + VL AC H G ++ G F M+ YG+ P++EHY
Sbjct: 554 LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHY 613
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
C++DLLGR G++ +A E I++M +P+ ++W LL C+ HGN+E+ E ++I+++ P
Sbjct: 614 ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRP 673
Query: 417 NNHGVYVVLSNMYAEAES 434
YV+LSN Y E S
Sbjct: 674 EYSATYVLLSNTYIETGS 691
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHVV-NCLVRCYSVSSDLNNARQVFDEIRN 178
VL+ C+ S+ K +H V KS D DL V+ N YS S+ A VFDE+
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
R + WT MI G + + F +ML G P+ ++++ +C LELG+ V
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + MRGF + T+L++MY K G++ + +F+ M E N +WNAMISG S+G
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EA DLF +++ PN T V V A +++G+++ + GIE +
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASEL-GIEGNVLVGTA 308
Query: 359 MVDLLGRCGKVLEAEELI 376
++D+ +CG + +A +
Sbjct: 309 LIDMYSKCGSLHDARSVF 326
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 129/248 (52%), Gaps = 10/248 (4%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A S G L ++F+ ++ + W TL+ A + S ++A+ + MR GFAPNQ T
Sbjct: 416 AYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFT 475
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F+ VL +C+++ L +Q+H + K+GLD + + + L+ Y+ + A +VFD+I
Sbjct: 476 FSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS 535
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
N + WT +ISGYAQ +AL LF +M + G + N+VTL VL AC+ G +E E
Sbjct: 536 NPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE--EG 593
Query: 238 VHVFVKMR-GF----EMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISG 291
+ F +M G+ EM ++ + + G L A MP E N W ++ G
Sbjct: 594 LFYFQQMEDGYGVVPEMEHY--ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 651
Query: 292 LASHGHAE 299
HG+ E
Sbjct: 652 CRVHGNVE 659
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 156/338 (46%), Gaps = 5/338 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S + A +F+ + N F W +I + M +G P++ ++
Sbjct: 112 SKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS 171
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
++++C + SL K +H + G + V L+ Y+ + ++ VF+ +
Sbjct: 172 AIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEH 231
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W MISG + EA LF +M PN TL SV A + + +G++V
Sbjct: 232 NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQ 291
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS-MPERNIAT-WNAMISGLASHGH 297
G E ++GTAL+ MY+K G+L A+++FD+ + T WNAMISG + G
Sbjct: 292 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC 351
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY- 356
++EAL+L+ ++ + I + T+ V +A + + GR + G + + G++ +
Sbjct: 352 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKC-GLDLMVVSVN 410
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ D +CG + + ++ RM + D+V W L+ A
Sbjct: 411 NAIADAYSKCGFLEDVRKVFDRMEER-DIVSWTTLVTA 447
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMG--AILGTALVHMYTKNGALAKAKALFDS 276
L VL CA+ G + + VH V FE +L H+Y+K A +FD
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
MP+RN+ +W MI G HG + F ++ I+P+ + ++ +C +++G
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
+ + + + G I ++++ + G + E + M+ + + V W A+++ C
Sbjct: 187 KMVHAQIV-MRGFATHIFVSTSLLNMYAKLGSI-EDSYWVFNMMTEHNQVSWNAMISGCT 244
Query: 397 NHG 399
++G
Sbjct: 245 SNG 247
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 221/399 (55%), Gaps = 33/399 (8%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG-FAPNQHTFTFVLK 123
L A ++F+ + + W TL+ A + D+A L+ M G PN T +
Sbjct: 194 LDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVS 253
Query: 124 ACSNVRSLNCCKQIHTHVSKSGL----DLDLHVVNCLVRC-------------------- 159
A + L +H +V++ G+ +LD +V+ +C
Sbjct: 254 AIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYS 313
Query: 160 -------YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
Y+ DL +A Q+F ++ R + W+ MI+ Y+Q + EA+ LF +M+ G
Sbjct: 314 WTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGV 373
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHV-FVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P TL SVLSACAQ GCL+LG ++ ++ + LG AL+ M+ K G + +A
Sbjct: 374 DPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEAS 433
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LFD M ERN+ +WN MI A HG +EEA+ LF +L+ E IVP+ ITF+G+L++C H+G
Sbjct: 434 KLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSG 493
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ GR+ F M+ Y IEP++EHY CM+DLLG+ G + EA E+ + M + D WGAL
Sbjct: 494 LVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGAL 553
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
L AC+ HGN+E+ V +++ L+P++ G+YV++S +YA
Sbjct: 554 LNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYA 592
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 212/436 (48%), Gaps = 42/436 (9%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL + C S +L Q+HA + ++ F ASRLLAFCALS+ L++A +
Sbjct: 37 PLLSLL-ESCASFRRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAHAAAILARA 95
Query: 76 Q-SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR----- 129
PN +M T++R + P +A+ L+ + R + TF F +KA +
Sbjct: 96 SPGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHG 155
Query: 130 -SLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + + IH K G + + V N LV Y+ L++A +VFDE+ R + WTT+
Sbjct: 156 GTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTL 215
Query: 188 ISGYAQSFRANEALMLFDQMLM-EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
+ GYA++ A+EA LF +M++ G PN+VTL + +SA Q G L G +H +V G
Sbjct: 216 VDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGG 275
Query: 247 FEMGAILGTALVHM-------------------------------YTKNGALAKAKALFD 275
L ALV M Y K G L A+ LF
Sbjct: 276 VARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFK 335
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
MP RN+ +W+ MI+ + EEA+ LFR++ + P D T V VLSAC G +D+
Sbjct: 336 DMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDL 395
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
GR I+ + I + ++D+ +CG V EA +L M + +VV W ++ A
Sbjct: 396 GRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAER-NVVSWNTMIMAH 454
Query: 396 KNHGNIEVAERVVKEI 411
HG E A R+ +++
Sbjct: 455 AVHGQSEEAIRLFEQL 470
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 139/281 (49%), Gaps = 13/281 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
KC + +++ M ++D ++ + ++ A + GDL A +LF + N W
Sbjct: 292 KCGCVRYAREVFDGM----EVKDVYSWTSMVN--AYAKCGDLESAEQLFKDMPRRNVVSW 345
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH-THVS 142
+ +I A + P++A++L+ M G P T VL AC+ + L+ + I+ ++
Sbjct: 346 SCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIV 405
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+ + L +++ N L+ ++ D+ A ++FDE+ R + W TMI +A ++ EA+
Sbjct: 406 SNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIR 465
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF---EMGAILGTALVH 259
LF+Q+ E P+ +T +L++C+ SG + G + F +M F E ++
Sbjct: 466 LFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRR--YFKEMEMFYRIEPRVEHYACMID 523
Query: 260 MYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAE 299
+ K G L +A + MP E + A W A+++ HG+ E
Sbjct: 524 LLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVE 564
>gi|449527549|ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 487
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 241/453 (53%), Gaps = 38/453 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD---LSYATRLFNS 74
+S L KCKS+ LKQIHA ++++ Q +A + LL A S SYA +F +
Sbjct: 10 ISPLLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKN 69
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV-RSLNC 133
+Q N FM+N++IR S P +AI Y+++ GF N++TF ++KAC+ V R L
Sbjct: 70 LQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELKR 129
Query: 134 CKQ-IHTHVSKSGLDLDLHVVNCLVRCYSV------------------------------ 162
+H HV G + D VV+ LV YS+
Sbjct: 130 IGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVWTVMVDGYGK 189
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
D+ +AR +FDE+ R + W+ M++ Y++ E L LF QM + PN + SV
Sbjct: 190 VGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSV 249
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
L+ACA G + G +H + K G + IL TALV MY+K G + A +F+ + ++
Sbjct: 250 LTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDA 309
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
WNAMISG A G+ ++L+LF K+ + TFV +L+AC HA ++ G + F
Sbjct: 310 GAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQ 369
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW---KPDVVMWGALLAACKNHG 399
M VY ++P+ EHY C+VDL+ R G V +AE+ ++ + D +WGA+L+AC+ +
Sbjct: 370 MYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYR 429
Query: 400 NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
NIE+ +R+ ++ AL + G V+ N+++EA
Sbjct: 430 NIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEA 462
>gi|357158377|ref|XP_003578109.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Brachypodium distachyon]
Length = 496
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/425 (38%), Positives = 239/425 (56%), Gaps = 12/425 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQD--HFAASRLLAFCALSSSGDLSYATRLFNSI 75
L+ L ++H ++Q+HA +I S R+ RL++ S DL A RL S+
Sbjct: 3 LATLIAGAATVHHIRQLHAHVITSGRLPTVGPILLPRLISL----PSPDLQLAQRLLLSL 58
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR--SLNC 133
SP ++N L+ ASSL P A L++++RR+G P+ HT VLKA + + SL
Sbjct: 59 PSPPLALYNLLLPPLASSLEPSAAARLFLHLRRSGLFPDAHTLPHVLKALAGLAPGSLPL 118
Query: 134 CKQIHTHVSKSGLDLDL-HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
H K GL+ + +V N L+ YS L A QVFDE+ RT+ W T ++
Sbjct: 119 VASTHAEAIKDGLECAVVYVRNALMAAYSSCGHLAGAIQVFDEMPRRTVVSWNTALTACV 178
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ + + LF M+ GF P+ T ++SA A+ G L LG+ H V R +M
Sbjct: 179 DNDYHSGCVGLFSAMVEAGFHPDQTTFVCMMSAAAELGNLPLGKWAHGQVVARRLDMTLQ 238
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
LGTA V+MY K G ++ A+ LF+ MP N+ TW+AMI G A +G A EAL LF +++
Sbjct: 239 LGTATVNMYAKCGMVSYARRLFERMPAWNVWTWSAMIMGFAQNGLAWEALKLFERMKGAS 298
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
I PN +TF+G+L AC HAG +D GRQ F M+ VY IEP + HY MVD+LGR G++ EA
Sbjct: 299 IAPNYVTFLGLLCACSHAGLVDEGRQFFREMRHVYRIEPMMRHYSAMVDVLGRNGRLQEA 358
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGN---IEVAERVVKEIIALEPNNHGVYVVLSNMY 429
+ + M + D V+W LL AC+ + I++ +V K ++ LEP G YV+++N+Y
Sbjct: 359 YDFVMDMPVEADPVVWRTLLGACQLQSSKDCIDIVSKVQKRLLELEPRRSGNYVMVANIY 418
Query: 430 AEAES 434
++ S
Sbjct: 419 SDIGS 423
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 44/219 (20%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G +SYA RLF + + N + W+ +I A + +A+ L+ M+ APN TF
Sbjct: 248 AKCGMVSYARRLFERMPAWNVWTWSAMIMGFAQNGLAWEALKLFERMKGASIAPNYVTFL 307
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL--NNAR--QVFDE 175
+L ACS+ ++ +Q + ++ + ++R YS D+ N R + +D
Sbjct: 308 GLLCACSHAGLVDEGRQFFREMRH------VYRIEPMMRHYSAMVDVLGRNGRLQEAYDF 361
Query: 176 IRNRTLN----VWTTMISGYAQSFRANEALMLFDQM---LMEGFEP----NSVTLASVLS 224
+ + + VW T++ G Q + + + + ++ L+E EP N V +A++ S
Sbjct: 362 VMDMPVEADPVVWRTLL-GACQLQSSKDCIDIVSKVQKRLLE-LEPRRSGNYVMVANIYS 419
Query: 225 ---------------------ACAQSGCLELGEKVHVFV 242
A C+E+G +VH F+
Sbjct: 420 DIGSWDEAAKARRLMREGGMKKMAGESCVEVGGQVHCFI 458
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 208/349 (59%), Gaps = 1/349 (0%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WNT+I + P+KA+ + M + + T L AC+ + K H +
Sbjct: 164 WNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLV 223
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+G +++ ++ + L+ Y+ + +AR++FD + +R WT+MISGY Q ++ EA+
Sbjct: 224 TNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIK 283
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
LF M + G + + T+++V+S+C Q G L+LG VH + + G + +L+ MY+
Sbjct: 284 LFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGLGKDISVKNSLIDMYS 343
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFV 321
K G + KA +F M +R+ +W +I G A++G + EALDLF ++E+E ++PN+ITF+
Sbjct: 344 KCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNEITFL 403
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
GVL++C H G ++ G + F M +YGI P+IEHYGCMVDLLGR + EAE+ IK M
Sbjct: 404 GVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIKEMPI 463
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
PD VMW +LL AC+ G + +AE V + I LEPN G V+LS +YA
Sbjct: 464 APDAVMWRSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYA 512
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 174/338 (51%), Gaps = 8/338 (2%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP-NQHTFTFVLK 123
LSYAT ++ P + ++++R+ +S P ++ +RR+G+ P + ++ + L
Sbjct: 45 LSYATVSGLLLRVP---LLHSVLRSLSSGPVPSLSLSFLSLLRRSGYMPIDNYSLSAALS 101
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
+ + S+ Q+H K GL D V+N L+ YS S + AR V D +
Sbjct: 102 TAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSAPKGASDT 161
Query: 184 --WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
W T+I+GY + N+AL F QM + VTL + L ACA++ +++G+ H
Sbjct: 162 VSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHAL 221
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ GFE+ +G++L+ MY K G + A+ +FD MP+RN W +MISG G ++EA
Sbjct: 222 LVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEA 281
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
+ LFR ++ + +D T V+S+C G +D+GR + ++G+ I ++D
Sbjct: 282 IKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCD-IHGLGKDISVKNSLID 340
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ +CG + +A ++ MV K D W ++ +G
Sbjct: 341 MYSKCGDIKKAYDIFCGMV-KRDNFSWTVIIMGFAANG 377
>gi|302803540|ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
gi|300148766|gb|EFJ15424.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
Length = 506
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 230/435 (52%), Gaps = 9/435 (2%)
Query: 2 SLKCSSLRQPPLPIPPLSLLA--DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCAL 59
S+ SS P I ++LA +++ Q K++H QM+ + D A + L+ A
Sbjct: 48 SMGSSSPPVEPNAITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYA- 106
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
G ++ A +F+ ++ W +I A +P +A+ LY M G PN TF
Sbjct: 107 -KCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFA 165
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
VL ACS++ +L K +H + +G DL V N LV Y +++AR+VFD ++ R
Sbjct: 166 SVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIR 225
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ WT MIS YA + EA+ L+ M PN+VTLASVLSACA G E G VH
Sbjct: 226 NVVSWTAMISSYAHHRHSEEAIQLYKAM---DVAPNAVTLASVLSACASLGNAEEGRAVH 282
Query: 240 --VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+ G +L AL++MY K G A+ +FD+M R+ +W+ +I+ HG
Sbjct: 283 EKLASTTTGLATDEVLQNALLNMYAKCGDGDAARKIFDAMAVRDTMSWSTLIAAYTQHGR 342
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EA+++ R +E E + + + VL+AC AG ++ R FG + R G K+E Y
Sbjct: 343 GGEAVEMCRSMELEGVQASSFIYGTVLTACSQAGLLESARHYFGCLTRDCGAPAKLEDYV 402
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CM +LGR G++ EAEEL+ M ++ + V W LLAACK H ++E RV + + LEP
Sbjct: 403 CMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVLFRLEPL 462
Query: 418 NHGVYVVLSNMYAEA 432
N YV+LSN+Y A
Sbjct: 463 NEAPYVLLSNIYVAA 477
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 183/345 (53%), Gaps = 7/345 (2%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQH 116
+ G L + +F+ + + WN++I A + S +P +AI L+ +M + PN
Sbjct: 2 FAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAI 61
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T+T VL ACS V +L K++H + +G D N LV Y+ + AR+VFD +
Sbjct: 62 TYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGM 121
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+ RT+ WT +IS Y + EAL L+ +M EG EPN +T ASVLSAC+ G LE G+
Sbjct: 122 KQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGK 181
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
VH +K G++ + ALV +Y K G++ A+ +FD M RN+ +W AMIS A H
Sbjct: 182 AVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHHR 241
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM-KRVYGIEPKIEH 355
H+EEA+ L++ ++ + PN +T VLSAC G + GR + + G+
Sbjct: 242 HSEEAIQLYKAMD---VAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEVL 298
Query: 356 YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
++++ +CG A ++ M + D + W L+AA HG
Sbjct: 299 QNALLNMYAKCGDGDAARKIFDAMAVR-DTMSWSTLIAAYTQHGR 342
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 151/269 (56%), Gaps = 5/269 (1%)
Query: 160 YSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG--FEPNSV 217
++ L +R+VFD+ R + + W +MI Y+QS EA+ LF M EPN++
Sbjct: 2 FAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAI 61
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSM 277
T +VL+AC+ LE G++VH + GF+ A +LV+MY K G++ +A+ +FD M
Sbjct: 62 TYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGM 121
Query: 278 PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGR 337
+R + +W +IS GH EALDL+RK+ E + PN ITF VLSAC G ++ G+
Sbjct: 122 KQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGK 181
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
+ MK G +P + +V L G+CG V A ++ RM + +VV W A++++ +
Sbjct: 182 AVHAQMK-AAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIR-NVVSWTAMISSYAH 239
Query: 398 HGNIEVAERVVKEIIALEPNNHGVYVVLS 426
H + E A ++ K + + PN + VLS
Sbjct: 240 HRHSEEAIQLYK-AMDVAPNAVTLASVLS 267
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 260 MYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ--IVPND 317
M+ K G+L +++ +FD +++ WN+MI + GH EA++LF+ + + PN
Sbjct: 1 MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNA 60
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
IT+ VL+AC ++ G+++ M G + +V++ +CG + EA E+
Sbjct: 61 ITYTTVLAACSAVEALEQGKEVHRQMVDA-GFQFDAAAENSLVNMYAKCGSITEAREVFD 119
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
M + VV W +++A G+ A + +++ + +EPN VLS
Sbjct: 120 GMKQRT-VVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLS 169
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 224/401 (55%), Gaps = 2/401 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+Q+H + + + D F ++ L+ S G + A LF++ + WN ++
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALID--VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFT 476
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S N +A+ L+ M G +Q TF KA + L KQIH V K DL
Sbjct: 477 VSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLF 536
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V++ ++ Y ++ +AR+VF++I + WTT+ISG ++ +AL + QM + G
Sbjct: 537 VISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG 596
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P+ T A+++ AC+ LE G+++H + + T+LV MY K G + A
Sbjct: 597 VQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAY 656
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LF M R++A WNAMI GLA HG+AEEAL+ F +++ + P+ +TF+GVLSAC H+G
Sbjct: 657 GLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSG 716
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ F SM++ YG+EP+IEHY C+VD L R G + EAE+++ M ++ M+ L
Sbjct: 717 LTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTL 776
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L AC+ G+ E ERV +++ ++P++ YV+LSN+YA A
Sbjct: 777 LNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAA 817
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 192/386 (49%), Gaps = 15/386 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQIH ++ D F + A +G ++YA R+F ++ + WNT+I A
Sbjct: 317 KQIHGAVVRFG--WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCA 374
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC-KQIHTHVSKSGLDLDL 150
S + ++ L++++ R+G P+Q T T VL+ACS++ C +Q+HT K+G+ LD
Sbjct: 375 RSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS 434
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V L+ YS + A +F L W M+ G+ S EAL LF M
Sbjct: 435 FVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHER 494
Query: 211 GFEPNSVTLASVLSACAQSGC---LELGEKVH-VFVKMRGFEMGAILGTALVHMYTKNGA 266
G + + +T A+ A +GC L+ G+++H V +KMR F + + ++ MY K G
Sbjct: 495 GEKADQITFANAAKA---AGCLVRLQQGKQIHAVVIKMR-FHYDLFVISGILDMYLKCGE 550
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A+ +F+ +P + W +ISG +G E+AL + ++ + P++ TF ++ A
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKA 610
Query: 327 CCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDV 385
C ++ G+QI + MK +P + +VD+ +CG + +A L +RM + V
Sbjct: 611 CSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRS-V 667
Query: 386 VMWGALLAACKNHGNIEVAERVVKEI 411
+W A++ HGN E A E+
Sbjct: 668 ALWNAMIVGLAQHGNAEEALNFFNEM 693
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 169/348 (48%), Gaps = 19/348 (5%)
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+YAT+LF + +WN + + + +A+ + +M ++ + T+ +L
Sbjct: 248 AYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVV 307
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+++ L KQIH V + G D + V N + Y + +N AR++F +++ L W
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWN 367
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA---QSGCLELGEKVHVFV 242
T+ISG A+S +L LF +L G P+ T+ SVL AC+ +S C +G +VH
Sbjct: 368 TVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYC--VGRQVHTCA 425
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
G + + + TAL+ +Y+K G + +A+ LF + ++A+WNAM+ G + EAL
Sbjct: 426 LKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREAL 485
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE-HYGCMV- 360
LF + + + ITF A + G+QI + + K+ HY V
Sbjct: 486 RLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI-------HAVVIKMRFHYDLFVI 538
Query: 361 ----DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
D+ +CG++ A ++ + + PD V W +++ C +G E A
Sbjct: 539 SGILDMYLKCGEMKSARKVFNQ-IPSPDDVAWTTVISGCVENGEEEQA 585
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 172/404 (42%), Gaps = 41/404 (10%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFN-SIQSPNHFM-WNTLIRA 89
K+ HA ++ S D + + L+ A G L A +LF+ + QS + +N ++ A
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYA--KCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 90 QASS------LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
A + +A ++ +R++ +HT + + K C S + + + + K
Sbjct: 91 YAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL D+ V LV Y+ + AR +FD + R + +W M+ Y + +E L L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F G P+ V++ ++L + E R E
Sbjct: 211 FSAFHRSGLRPDCVSVRTILMGVGKKTVFE-----------RELEQ-------------- 245
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
A A LF + ++ WN +S G EA+D FR + K ++ + +T++ +
Sbjct: 246 --VRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVI 303
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LS +++G+QI G++ R +G + + +++ + G V A + +M +
Sbjct: 304 LSVVASLNHLELGKQIHGAVVR-FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EV 361
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGVYVVL 425
D++ W +++ C G E + R+ +++ L P+ + VL
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL 405
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 30/326 (9%)
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A LF+ + + +WN +++A D+ + L+ R+G P+ C +
Sbjct: 176 ARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD----------CVS 225
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
VR++ + K+ + +L VR Y A ++F + + VW
Sbjct: 226 VRTI-----LMGVGKKTVFERELE----QVRAY--------ATKLFVCDDDSDVTVWNKT 268
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
+S Y Q+ EA+ F M+ +S+T +LS A LELG+++H V G+
Sbjct: 269 LSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGW 328
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ + + ++MY K G++ A+ +F M E ++ +WN +ISG A G E +L LF
Sbjct: 329 DQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFID 388
Query: 308 LEKEQIVPNDITFVGVLSACCH-AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
L + ++P+ T VL AC VGRQ+ + GI ++D+ +
Sbjct: 389 LLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKA-GIVLDSFVSTALIDVYSKG 447
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALL 392
GK+ EAE L D+ W A++
Sbjct: 448 GKMEEAELLFHNQD-GFDLASWNAMM 472
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE- 279
S+L L LG++ H + G + L+ MY K G+L A+ LFD P+
Sbjct: 18 SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQS 77
Query: 280 -RNIATWNAMISGLASHGH------AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
R++ T+NA+++ A G EA +FR L + ++ T + C G
Sbjct: 78 DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGS 137
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G ++ G++ + G +V++ + ++ EA L RM + DVV+W ++
Sbjct: 138 PSASEALQGYAVKI-GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DVVLWNVMM 195
Query: 393 AA 394
A
Sbjct: 196 KA 197
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 221/402 (54%), Gaps = 3/402 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ +H + + I + A+ LL S+ D ++F ++ N W +I +
Sbjct: 531 RVVHGYSVKTGLIGETSLANALLDM--YSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYT 588
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ DK L M G P+ T VL + SL K +H + ++G++ L
Sbjct: 589 RAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLP 648
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V N L+ Y ++ AR VFD + N+ + W T+I GY+++ ANE+ LF ML++
Sbjct: 649 VANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ- 707
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
F+PN+VT+ +L A A LE G ++H + RGF + ALV MY K GAL A+
Sbjct: 708 FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVAR 767
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LFD + ++N+ +W MI+G HG ++A+ LF ++ + P+ +F +L ACCH+G
Sbjct: 768 VLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSG 827
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
G + F +M++ Y IEPK++HY C+VDLL G + EA E I+ M +PD +W +L
Sbjct: 828 LTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSL 887
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
L C+ H ++++AE+V + LEP N G YV+L+N+YAEAE
Sbjct: 888 LHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAE 929
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 187/389 (48%), Gaps = 15/389 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S G + A ++F+S+ + + WN+ I S+ D+A+ L+ M G + T
Sbjct: 244 SRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVL 303
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNC---------LVRCYSVSSDLNNAR 170
VL AC+ + K +H + KSGL DL V LV Y D+ +AR
Sbjct: 304 SVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSAR 363
Query: 171 QVFDEIRNR-TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
+VFD + ++ ++VW ++ GYA++ E+L+LF+QM G P+ L+ +L
Sbjct: 364 RVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCL 423
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
C G H ++ GF + AL+ Y K+ + A +FD MP ++ +WN++I
Sbjct: 424 SCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVI 483
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
SG S+G EA++LF ++ + + T + VL AC + + VGR + G + G+
Sbjct: 484 SGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKT-GL 542
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ ++D+ C ++ + M K +VV W A++ + G + +++
Sbjct: 543 IGETSLANALLDMYSNCSDWHSTNQIFRNMAQK-NVVSWTAMITSYTRAGLFDKVAGLLQ 601
Query: 410 EII--ALEPNNHGVYVVLSNMYAEAESMK 436
E++ ++P+ V VL +A ES+K
Sbjct: 602 EMVLDGIKPDVFAVTSVLHG-FAGDESLK 629
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 176/365 (48%), Gaps = 25/365 (6%)
Query: 63 GDLSYATRLFNSI--QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
GDL A +F+ + + + +W +L+ A A + + + + L+ M+ G +P+ H +
Sbjct: 144 GDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSC 203
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
VLK +++ S+ + IH + K GL V N L+ YS + +A QVFD + R
Sbjct: 204 VLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARD 263
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W + ISGY + + A+ LF +M EG E +SVT+ SVL ACA+ G +G+ VH
Sbjct: 264 AISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHG 323
Query: 241 FVKMRGF---------EMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMIS 290
+ G + LG+ LV MY K G + A+ +FD+MP + N+ WN ++
Sbjct: 324 YSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMG 383
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS-----ACCHAGFIDVGRQIFGSMKR 345
G A EE+L LF ++ + I P++ +L +C G + G + K
Sbjct: 384 GYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLV----KL 439
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVA 404
+G + + ++ + + A + RM D + W ++++ C ++G N E
Sbjct: 440 GFGTQCAV--CNALISFYAKSNMIDNAVLVFDRMP-HQDTISWNSVISGCTSNGLNSEAI 496
Query: 405 ERVVK 409
E V+
Sbjct: 497 ELFVR 501
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 166/347 (47%), Gaps = 5/347 (1%)
Query: 53 LLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA 112
L++F A S+ D A +F+ + + WN++I S+ +AI L++ M G
Sbjct: 451 LISFYAKSNMID--NAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHE 508
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
+ T VL AC+ + +H + K+GL + + N L+ YS SD ++ Q+
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQI 568
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
F + + + WT MI+ Y ++ ++ L +M+++G +P+ + SVL A L
Sbjct: 569 FRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESL 628
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+ G+ VH + G E + AL+ MY + +A+ +FD + ++I +WN +I G
Sbjct: 629 KQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGY 688
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
+ + A E+ LF + Q PN +T +L A ++ GR+I R +E
Sbjct: 689 SRNNFANESFSLFSDM-LLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDS 747
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+VD+ +CG +L A L R+ K +++ W ++A HG
Sbjct: 748 YTS-NALVDMYVKCGALLVARVLFDRLT-KKNLISWTIMIAGYGMHG 792
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 161/336 (47%), Gaps = 9/336 (2%)
Query: 63 GDLSYATRLFNSIQSP-NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFV 121
GD+ A R+F+++ S N +WN ++ A + ++++ L+ M G P++H + +
Sbjct: 357 GDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCL 416
Query: 122 LKACSNVRSLNCCKQ---IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
LK + L+C + H ++ K G V N L+ Y+ S+ ++NA VFD + +
Sbjct: 417 LKC---ITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPH 473
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+ W ++ISG + +EA+ LF +M M+G E +S TL SVL ACA+S +G V
Sbjct: 474 QDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVV 533
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + G L AL+ MY+ +F +M ++N+ +W AMI+ G
Sbjct: 534 HGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLF 593
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
++ L +++ + I P+ VL + G+ + G R G+E +
Sbjct: 594 DKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIR-NGMEKLLPVANA 652
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
++++ C + +E L+ V D++ W L+
Sbjct: 653 LMEMYVNC-RNMEEARLVFDHVTNKDIISWNTLIGG 687
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 17/324 (5%)
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHV-SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE 175
++ V++ C RSL ++ H V + +G + + LV Y DL AR VFDE
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDE 155
Query: 176 IRNRT--LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
+ R + VWT+++S YA++ E + LF QM G P++ ++ VL A G +
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
GE +H ++ G + AL+ +Y++ G + A +FDSM R+ +WN+ ISG
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF 275
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPK 352
S+G + A+DLF K+ E + +T + VL AC GF VG+ + G SMK G+
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKS--GLLWD 333
Query: 353 IEHYGCMVD---------LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+E +D + +CG + A + M K +V +W ++ E
Sbjct: 334 LESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEE 393
Query: 404 AERVVKEI--IALEPNNHGVYVVL 425
+ + +++ + + P+ H + +L
Sbjct: 394 SLLLFEQMHELGITPDEHALSCLL 417
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 246/454 (54%), Gaps = 42/454 (9%)
Query: 15 IPPLSLLADKCKSMHQL-KQIHAQMIISSRIQDHFAASRLLAF----------------C 57
+PPL A K + + Q+HAQ + + D F + LLA C
Sbjct: 97 LPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSC 156
Query: 58 A--------------LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLY 103
A G++ A R+F+ + N W+T++ A++ D A ++
Sbjct: 157 AGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMF 216
Query: 104 MNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS 163
M G N T+ ++ + L +++ + +L N ++R YSV+
Sbjct: 217 DRMPAIG--RNVVTWNSMVTGFARHGLLPLARKMFDEMPVR----NLVSWNAMLRGYSVN 270
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASV 222
SD++ AR++FD + + + WT MISGYAQ+ R + L LF M E +PN VT+ SV
Sbjct: 271 SDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSV 330
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAI--LGTALVHMYTKNGALAKAKALFDSMPER 280
LSACA LE G VH F+ + LG AL+ MY K G A +F+S+ +
Sbjct: 331 LSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRK 390
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
N++ WNA+I+ LA +G+A +++D F ++++ PNDITFVGVL+AC H G +D GR+ F
Sbjct: 391 NVSAWNALITRLAMNGNARDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCF 450
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
SM G++P+++HYGCMVD+LGR G + EAEELI+ M PDV+++GALL AC+ H
Sbjct: 451 QSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKR 510
Query: 401 IEVAERVVKEIIALEPN--NHGVYVVLSNMYAEA 432
+VAERV EI +L N G +V++S++YA A
Sbjct: 511 FDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAA 544
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 42/355 (11%)
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSL-NCCKQIHT 139
F+ LIRA ASS +P + + ++ R G P++ T +L + + + Q+H
Sbjct: 60 FLQKILIRASASSASPGLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHA 119
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSD--------------------------------LN 167
+ G D+ VVN L+ Y D +
Sbjct: 120 QAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEME 179
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACA 227
+A++VFDE+ R W+TM+ GYA + + A +FD+M G N VT S+++ A
Sbjct: 180 SAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RNVVTWNSMVTGFA 237
Query: 228 QSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
+ G L L K+ + +R + A++ Y+ N + A+ LFD MPE+++ +W
Sbjct: 238 RHGLLPLARKMFDEMPVRNL----VSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTC 293
Query: 288 MISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
MISG A G ++ L+LFR ++ E V PN++T V VLSAC + ++ GR + + +
Sbjct: 294 MISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKH 353
Query: 347 YGIEPKIEHYG-CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
+ + G ++D+ +CG+ A ++ + K +V W AL+ +GN
Sbjct: 354 KMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRK-NVSAWNALITRLAMNGN 407
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 70/323 (21%)
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL-ELGEKVHVFVKMR 245
+I A S + F +L G P+ TL +L + + G +VH R
Sbjct: 65 LIRASASSASPGLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRR 124
Query: 246 GFEMGAILGTALVHMY--------------------------------TKNGALAKAKAL 273
GF + AL+ MY K G + AK +
Sbjct: 125 GFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRV 184
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
FD MP RN +W+ M+ G A+ G + A ++F ++ I N +T+ +++ G +
Sbjct: 185 FDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPA--IGRNVVTWNSMVTGFARHGLL 242
Query: 334 DVGRQIF-----------GSMKRVYGI---------------EPKIEHYGCMVDLLGRCG 367
+ R++F +M R Y + E + + CM+ + G
Sbjct: 243 PLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAG 302
Query: 368 KVLEAEELIKRMVW----KPDVVMWGALLAACKNHGNIE----VAERVVKEIIALEPNNH 419
+ + EL + M +P+ V ++L+AC N +E V + K + L N +
Sbjct: 303 RYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLN-NEY 361
Query: 420 GVYVVLSNMYAEAESMKMQLEIL 442
+ L +MYA+ + ++I
Sbjct: 362 NLGAALIDMYAKCGRTDIAVKIF 384
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 198/360 (55%), Gaps = 4/360 (1%)
Query: 77 SPNH--FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+PN W LI + A+F + NMRR PN TF KA ++RS
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
KQ+H K+G D+ V YS + AR++FDE+ R + W +S
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
R ++AL F + EG EP ++SVLSACA LE+G+ VH +G
Sbjct: 188 GRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVG 247
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE--KEQ 312
+ALV MY K G++ A+ FD MPERN+ TWNAMI G A G A+ A+ LF ++ +
Sbjct: 248 SALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR 307
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+ PN +TFV VLSAC AG ++VG +IF SM+ YGIEP EHY C+VDLLGR G V +A
Sbjct: 308 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQA 367
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ IK+M +P V +WGALL A K G E+ + + L+P + G +V+LSNM+A A
Sbjct: 368 YQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAA 427
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 148/314 (47%), Gaps = 10/314 (3%)
Query: 135 KQIHTHVSKSGLD--LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+ H + K+ LD L + N LV YS N+A+ + NR++ WT +I+G
Sbjct: 26 RAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSV 84
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
Q+ R AL F M + +PN T A +G++VH G
Sbjct: 85 QNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVF 144
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+G + MY+K G +A+ +FD MPERNIATWNA +S G ++AL F + KE
Sbjct: 145 VGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEG 204
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
I P D VLSAC ++VG+ + ++ + I +VD+ G+CG + +A
Sbjct: 205 IEPTDFMVSSVLSACAGLSVLEVGKSVH-TLAVKACVVGNIFVGSALVDMYGKCGSIEDA 263
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA----LEPNNHGVYVVLSNM 428
E M + ++V W A++ + G ++A + E+ + P N+ +V + +
Sbjct: 264 ERAFDEMPER-NLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAP-NYVTFVCVLSA 321
Query: 429 YAEAESMKMQLEIL 442
+ A S+ + +EI
Sbjct: 322 CSRAGSVNVGMEIF 335
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 128/274 (46%), Gaps = 10/274 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+HA + + +I D F AF S +G A ++F+ + N WN +
Sbjct: 128 KQVHALAVKAGQISDVFVGCS--AFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSV 185
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
D A+ ++ R+ G P + VL AC+ + L K +HT K+ + ++
Sbjct: 186 LEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIF 245
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V + LV Y + +A + FDE+ R L W MI GYA +A+ A+ LFD+M
Sbjct: 246 VGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGS 305
Query: 212 FE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAILGTALVHMYTKNGA 266
PN VT VLSAC+++G + +G + +F MR G E GA +V + + G
Sbjct: 306 HRVAPNYVTFVCVLSACSRAGSVNVG--MEIFESMRGRYGIEPGAEHYACVVDLLGRAGM 363
Query: 267 LAKAKALFDSMPER-NIATWNAMISGLASHGHAE 299
+ +A MP R ++ W A++ G +E
Sbjct: 364 VEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 397
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 215/373 (57%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
L SG + + RLF+ ++ + W T+I + +A+ L+ +MR+ G A +Q+T
Sbjct: 213 GLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYT 272
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F VL AC +R+L K+IHT + +SG + ++ V + LV Y + A VF +
Sbjct: 273 FGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMA 332
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
N+ + WT M+ GY Q+ + EA+ +F M G EP+ TL SV+S+CA LE G +
Sbjct: 333 NKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQ 392
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
H + G + AL+ +Y K G++ + LFD M R+ +W A++SG A G
Sbjct: 393 FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGK 452
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A E +DLF ++ + + P+ +TF+ VLSAC AG ++ G+Q F SM + +GI P +HY
Sbjct: 453 ANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYT 512
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CM+DL GR G++ EA+ I +M + PD + W LL++C+ +GN E+ + + ++ L+P
Sbjct: 513 CMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQ 572
Query: 418 NHGVYVVLSNMYA 430
N Y++LS++YA
Sbjct: 573 NPAGYILLSSIYA 585
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 220/473 (46%), Gaps = 73/473 (15%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L + ++ Q K++H +I S + F + L+ A S G+++YA +F+ + PN
Sbjct: 14 LCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLIN--AYSKLGNITYARHVFDKMPQPNS 71
Query: 81 FMWNTLIRAQASS-----------LNPDK--------------------AIFLYMNMRRT 109
F WNT++ A + S + P++ A+ Y +M +
Sbjct: 72 FSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKD 131
Query: 110 G-FAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNN 168
G N+ TF+ +L S+ ++ +QIH + K G + V + LV Y+ ++
Sbjct: 132 GVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSV 191
Query: 169 ARQVFDEIRNRTLNV-------------------------------WTTMISGYAQSFRA 197
A QVFDE++ R + + WTTMI+G Q+
Sbjct: 192 ASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLE 251
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EA+ LF M EG + T SVL+AC L+ G+++H + G+ +G+AL
Sbjct: 252 AEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K ++ A+A+F M +N+ +W AM+ G +G +EEA+ +F +++ I P+D
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
T V+S+C + ++ G Q F V G+ I ++ L G+CG + ++ +L
Sbjct: 372 FTLGSVISSCANLASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430
Query: 378 RMVWKPDVVMWGALLAACKNHGN----IEVAERVVKEIIALEPNNHGVYVVLS 426
M ++ D V W AL++ G I++ ER++ + L+P+ VLS
Sbjct: 431 EMSFR-DEVSWTALVSGYAQFGKANETIDLFERML--VQGLKPDAVTFIAVLS 480
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 164/370 (44%), Gaps = 67/370 (18%)
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
K C R+ K++H + KS + + + N L+ YS ++ AR VFD++
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 183 VWTTMISGYAQSFRAN-------------------------------EALMLFDQMLMEG 211
W TM+S Y++S + EA+ ++ M+ +G
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 212 -FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
N +T +++L + GC++LG ++H + GF +G++LV MY K G ++ A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 271 KALFDSMPERNIA-------------------------------TWNAMISGLASHGHAE 299
+FD + ERN+ +W MI+GL +G
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EA+DLFR + +E + + TF VL+AC + G++I + R G + +
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRS-GYNHNVFVGSAL 311
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPN 417
VD+ +C V AE + KRM K +VV W A+L +G E A RV ++ +EP+
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANK-NVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPD 370
Query: 418 NHGVYVVLSN 427
+ + V+S+
Sbjct: 371 DFTLGSVISS 380
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 232/412 (56%), Gaps = 9/412 (2%)
Query: 25 CKSMHQLK---QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C S+H L+ Q+HA I ++ D + + L+ A L+ A ++F+ + +
Sbjct: 360 CASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC--LTEARKVFDIFAADDVV 417
Query: 82 MWNTLIRAQA---SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
++N +I + + A+ ++ +MR P+ TF +L+A +++ SL KQIH
Sbjct: 418 LFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ K GL+LD+ + L+ YS L ++R VFDE++ + L +W +M SGY Q
Sbjct: 478 GLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENE 537
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LF ++ + P+ T +++A L+LG++ H + RG E + AL+
Sbjct: 538 EALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY K G+ A FDS R++ WN++IS A+HG +AL + K+ E I PN I
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYI 657
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TFVGVLSAC HAG ++ G + F M R +GIEP+ EHY CMV LLGR G++ EA ELI++
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEK 716
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
M KP ++W +LL+ C GN+E+AE + I +P + G + +LSN+YA
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYA 768
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 177/365 (48%), Gaps = 7/365 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
Q+ + ++ S +D + + L+ F G++ YA +F+++ + W T+I
Sbjct: 169 QLQSFLVKSRFDRDVYVGTLLIDFYL--KEGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
++ L+ + P+ + + VL ACS + L KQIH H+ + G + D +
Sbjct: 227 MGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASL 286
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
+N L+ Y + A ++FD + N+ + WTT++SGY Q+ EA+ LF M G
Sbjct: 287 MNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGL 346
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
+P+ +S+L++CA LE G +VH + + + +L+ MY K L +A+
Sbjct: 347 KPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARK 406
Query: 273 LFDSMPERNIATWNAMISG---LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
+FD ++ +NAMI G L + +AL++F + I P+ +TFV +L A
Sbjct: 407 VFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASAS 466
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWG 389
+ + +QI G M + +G+ I ++ + C + ++ + M K D+V+W
Sbjct: 467 LTSLGLSKQIHGLMFK-FGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVK-DLVIWN 524
Query: 390 ALLAA 394
++ +
Sbjct: 525 SMFSG 529
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 137/266 (51%), Gaps = 7/266 (2%)
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFR 196
+H + SGL+LD ++ N L+ YS + + AR+VF+++ R L W+TM+S
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 197 ANEALMLF-DQMLMEGFEPNSVTLASVLSACA---QSGCLELGEKVHVFVKMRGFEMGAI 252
E+L++F D PN L+S + AC+ SG + + VK R F+
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSR-FDRDVY 184
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
+GT L+ Y K G + A+ +FD++PE++ TW MISG G + +L LF +L +
Sbjct: 185 VGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGN 244
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEA 372
+VP+ VLSAC F++ G+QI + R YG E ++D +CG+V A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGHEKDASLMNVLIDSYVKCGRVRAA 303
Query: 373 EELIKRMVWKPDVVMWGALLAACKNH 398
+L M K +++ W LL+ K +
Sbjct: 304 HKLFDGMPNK-NIISWTTLLSGYKQN 328
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/415 (35%), Positives = 238/415 (57%), Gaps = 11/415 (2%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASR--LLAFCALSSS-GDLSYATRLFNSIQSPNH 80
KC ++ +KQ+ A ++ + + + SR LL CALS S L YA + I P+
Sbjct: 10 KCTTLSHIKQVQAHLLTTGQFNLRISPSRTRLLEHCALSPSPAYLPYAAHIHRHIPHPST 69
Query: 81 FMWNTLIRAQASSLNPDKAI-FLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
+N L+R A +P A+ FL T P+ TF+F L A + +L+ QIH+
Sbjct: 70 NDFNALLRGLARGPHPTHALTFL-----STILHPDALTFSFSLIASARALALSETSQIHS 124
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
H+ + G D+ + L+ Y+ DL++A++VFDEI R + W +I+G AQ +++E
Sbjct: 125 HLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSE 184
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL LF++M EG + N +++ L+AC+Q G L GE VH V+ ++ + A++
Sbjct: 185 ALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVID 244
Query: 260 MYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY K G K +F +M +++ TWN MI A HG AL+LF ++ K Q+ + +
Sbjct: 245 MYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSV 304
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
T++ VL AC HAG ++ G ++F M G+ ++HYG +VDLLGR G++ EA +I
Sbjct: 305 TYLAVLCACNHAGLVEEGVRLFDEMVG-RGVNRNVKHYGSVVDLLGRAGRLGEAYRIINS 363
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
M PDVV+W +LL ACK +GN+E+AE ++++ + N+ G +V+LSN+YA E
Sbjct: 364 MPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARE 418
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 224/399 (56%), Gaps = 2/399 (0%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K H Q+I D ++ L+ S G + A ++F+ I + WN +I
Sbjct: 18 KACHGQVIRLGLETDTLTSNMLMNM--YSKCGLIRRACKVFDEIPERSMVSWNIMIGTCV 75
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +KAI +++ M+R G ++ T + V+ AC+ + C+Q+H K+ +D D+
Sbjct: 76 QNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVF 135
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
V L+ Y+ + +A VF+ + R W+++++G+ Q+ E L+LF + G
Sbjct: 136 VGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMG 195
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
E N ++SV+ ACA L G +VH V GF + +ALV MY K G++ +A
Sbjct: 196 LENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEEAY 255
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
LF ++ ++N+ WNA+ISG A H + E ++LF ++++ + P+++T+V VLSAC H G
Sbjct: 256 VLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVG 315
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+D GR F M R + + P + HY CMVD+LGR G V EA EL+ +M + MWG+L
Sbjct: 316 LVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSL 375
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
LA+C+ HGN+E+AE K + +EP+ G YV+L+N YA
Sbjct: 376 LASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYA 414
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+L+ C+ R K H V + GL+ D N L+ YS + A +VFDEI R+
Sbjct: 4 LLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERS 63
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
+ W MI Q+ +A+ +F +M EG + T++SV+ ACA G + ++H
Sbjct: 64 MVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHA 123
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
F + +GTAL+ +Y K G++ A +F+ MPERN TW+++++G + EE
Sbjct: 124 FAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEE 183
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
L LF + ++ + N V+ AC + GRQ+ + R G P +V
Sbjct: 184 GLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRT-GFGPNNFVASALV 242
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
D+ +CG + EA L + K +VV+W A+++ H
Sbjct: 243 DMYAKCGSIEEAYVLFCN-IEKKNVVLWNAIISGFAKHA 280
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
L S+L CA++ G+ H V G E + L++MY+K G + +A +FD +P
Sbjct: 1 LHSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIP 60
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQ 338
ER++ +WN MI +G E+A+D+F ++++E ++ T V+ AC G + RQ
Sbjct: 61 ERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQ 120
Query: 339 IFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ ++K V ++ + ++D+ +CG + +A + + M + DV W +++A
Sbjct: 121 LHAFAIKAV--VDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVT-WSSIVAG 174
>gi|115484979|ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|62734753|gb|AAX96862.1| Similar to selenium-binding protein [Oryza sativa Japonica Group]
gi|77549625|gb|ABA92422.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|125597201|gb|EAZ36981.1| hypothetical protein OsJ_21321 [Oryza sativa Japonica Group]
Length = 582
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 219/404 (54%), Gaps = 5/404 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM-WNTLIRAQ 90
+ H + + +D F +S L++ S G++ A R+F + W ++
Sbjct: 143 RAAHGDAVRFALARDGFVSSALISM--YSQEGEVRDAERVFAERDDARTVVSWTAMVAGY 200
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A + +A+ L+ +M G PN+ T L L + +H V K G D ++
Sbjct: 201 AQNCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANV 260
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
+VN L+ Y AR +F+ + +RTL W TM++ Y Q +A+ F +ML E
Sbjct: 261 PMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTE 320
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
+ VTL SVLSACA+SG L G+ VH + G + A +G LV MY K G +A A
Sbjct: 321 KVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYA 380
Query: 271 KALFDSMPER--NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACC 328
K +F S R ++ +W+AMI+ A+HG AEEAL LF + E + PN TF VL ACC
Sbjct: 381 KEVFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACC 440
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMW 388
H+G +D G + F S+ Y + P +EHY CMVD+LGR G+++EA +I+ M +PD +W
Sbjct: 441 HSGLVDEGLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCVW 500
Query: 389 GALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
GA L C+ HG +E+AE V KE+ N+ YV+++NMY EA
Sbjct: 501 GAFLGGCRLHGMVELAEYVAKELFDSGSNDVTFYVLMANMYFEA 544
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 184/343 (53%), Gaps = 4/343 (1%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQA-SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
L+YA R+F++ S + +MWNTL+RA A S + A+ LY MR G AP+ +T+ VL
Sbjct: 72 LAYARRVFDAAPSRDAYMWNTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLP 131
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN-RTLN 182
AC+ R+ + H + L D V + L+ YS ++ +A +VF E + RT+
Sbjct: 132 ACAAARAPRLGRAAHGDAVRFALARDGFVSSALISMYSQEGEVRDAERVFAERDDARTVV 191
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
WT M++GYAQ+ EA+ LF M+ G PN +TL S L L +GE VH FV
Sbjct: 192 SWTAMVAGYAQNCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGFV 251
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
GF+ + AL+ MY + G+ A+ LF+ M R + +WN M++ HG +A+
Sbjct: 252 VKLGFDANVPMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQAI 311
Query: 303 DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDL 362
FR++ E++ + +T V VLSAC +G + G+ + + R +G++ +VD+
Sbjct: 312 KFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVH-ELARSHGLDTDARIGNVLVDM 370
Query: 363 LGRCGKVLEAEELIKRMVWKP-DVVMWGALLAACKNHGNIEVA 404
+CG++ A+E+ + VV W A++ A NHG E A
Sbjct: 371 YAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEA 413
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/412 (35%), Positives = 227/412 (55%), Gaps = 8/412 (1%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H+ +I + D F + L+ C S +G L+ A ++F+ I N W +I S
Sbjct: 124 LHSLVIKTGFDWDVFVKTGLV--CLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIES 181
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+A+ L+ + G P+ T +L ACS V L + I ++ +SG ++ V
Sbjct: 182 GCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVA 241
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
LV Y+ + AR+VFD + + + W+ +I GYA + EAL +F +M E
Sbjct: 242 TSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVR 301
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P+ + V SAC++ G LELG + F +LGTAL+ Y K G++A+AK +
Sbjct: 302 PDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEV 361
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F M ++ +NA+ISGLA GH A +F ++ K + P+ TFVG+L C HAG +
Sbjct: 362 FKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLV 421
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
D G + F M V+ + P IEHYGCMVDL R G ++EA++LI+ M + + ++WGALL
Sbjct: 422 DDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLG 481
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQL 439
C+ H + ++AE V+K++I LEP N G YV+LSN+Y+ EAE ++ L
Sbjct: 482 GCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSL 533
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 220/397 (55%), Gaps = 7/397 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
KS+HQ KQ H ++ QD + + LL ++ YAT +F PN F++NT
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAA--TQYATVVFAQTPHPNIFLYNT 71
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV-RSLNCCKQIHTHVSKS 144
LIR S+ A+ +Y +MR+ GFAP+ TF FVLKAC+ + + +H+ V K+
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G D D+ V LV YS + L +AR+VFDEI + + WT +I GY +S EAL LF
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLF 191
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+L G P+S TL +L AC++ G L G + +++ G + T+LV MY K
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G++ +A+ +FD M E+++ W+A+I G AS+G +EALD+F ++++E + P+ VGV
Sbjct: 252 GSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVF 311
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
SAC G +++G G M + + ++D +CG V +A+E+ K M + D
Sbjct: 312 SACSRLGALELGNWARGLMDGDEFLSNPVLGTA-LIDFYAKCGSVAQAKEVFKGMR-RKD 369
Query: 385 VVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNH 419
V++ A+++ G++ A V ++ + ++P+ +
Sbjct: 370 CVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGN 406
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 147/293 (50%), Gaps = 5/293 (1%)
Query: 122 LKACS--NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
LK C ++SL+ KQ H + + GL D +++N L+R + A VF + +
Sbjct: 5 LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHP 64
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQ-SGCLELGEKV 238
+ ++ T+I G + +A+ ++ M GF P++ T VL AC + +G +
Sbjct: 65 NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 124
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H V GF+ + T LV +Y+KNG L A+ +FD +PE+N+ +W A+I G G
Sbjct: 125 HSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCF 184
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EAL LFR L + + P+ T V +L AC G + GR I G M R G +
Sbjct: 185 GEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYM-RESGSVGNVFVATS 243
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
+VD+ +CG + EA + MV K DVV W AL+ ++G + A V E+
Sbjct: 244 LVDMYAKCGSMEEARRVFDGMVEK-DVVCWSALIQGYASNGMPKEALDVFFEM 295
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 215/359 (59%), Gaps = 1/359 (0%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN +I S + ++A+ L++ M + + +T+ L + +++RSL KQ+H +
Sbjct: 336 WNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIW 395
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
KSG + + + N L+ Y+ +L+ R++FD WTT+++ Y+QS +AL
Sbjct: 396 KSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALS 454
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
+F QM GF+PN VT + VL++CA LE G++VH GF + + L+ MY
Sbjct: 455 VFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYA 514
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
K G++ A +F+S+ + ++ +W AMISG A HG A++AL+LFRK+E PN TF+
Sbjct: 515 KCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLC 574
Query: 323 VLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+L AC H G +D G + F M+ YG+ P+IEHY C+VD+LGR G++ EA + I +M +
Sbjct: 575 LLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIE 634
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
PD +W LL AC+ HGNI++A+ +++++ P++ V+LSN Y EA +++ L +
Sbjct: 635 PDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNV 693
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 132/254 (51%), Gaps = 3/254 (1%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHV-VNCLVRCYSVSSDLNNARQVFDEIRN 178
+++ ++ R L K IH V K L + L V +N LV YS SD +ARQVFDEI
Sbjct: 67 LIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQ 126
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
+++ WT ++ G ++ + + F ++L P+ L++ + AC + +GE V
Sbjct: 127 KSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMV 186
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H V RGF + T+L+ MY K G + + +F+S+ RN +WNAMISG S+G
Sbjct: 187 HAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLY 246
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EA + F ++ E+I PN F+ V A G ++ GR I + G++ I
Sbjct: 247 AEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYI-NRIAFEIGMQSNIHVGTA 305
Query: 359 MVDLLGRCGKVLEA 372
++D+ +CG V E+
Sbjct: 306 LIDMFAKCGCVTES 319
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 166/333 (49%), Gaps = 15/333 (4%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L+ +AD +S+ +KQ+H + S I + + A+ + G+L +LF++ +
Sbjct: 375 LNSIADM-RSLEYVKQLHGMIWKSGSIGVSLCNALMDAY---AKCGELDAMRKLFDTWEE 430
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
N W TL+ A + S + A+ ++ MR GF PNQ TF+ VL +C+++ SL +Q+
Sbjct: 431 SNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQV 490
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H+ K+G D V + L+ Y+ + +A +VF+ +++ + WT MISGYAQ A
Sbjct: 491 HSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMA 550
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK-VHVFVKMRGFEMGAILGTA 256
+AL LF +M + PNS T +L AC+ G ++ G + H+ + G
Sbjct: 551 KDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYAC 610
Query: 257 LVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV- 314
+V + + G L +A MP E + W+ ++ HG+ + A K+ ++++
Sbjct: 611 VVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLA-----KIAAQKVLS 665
Query: 315 --PNDITFVGVLSACC-HAGFIDVGRQIFGSMK 344
P+D + +LS AG I+ G + MK
Sbjct: 666 YNPDDFAALVLLSNTYREAGNIEGGLNVRNMMK 698
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 176/421 (41%), Gaps = 25/421 (5%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+ + + K IH +I I+ A S D A ++F+ I + F W
Sbjct: 75 RCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTV 134
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
L+ + I ++ + P+++ + ++AC V S+ + +H V G
Sbjct: 135 LMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRG 194
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
V L+ Y+ + ++ +VF+ + NR W MISG+ + EA F
Sbjct: 195 FSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFL 254
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+ML E PN SV A Q G +E G ++ G + +GTAL+ M+ K G
Sbjct: 255 RMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCG 314
Query: 266 ALAKAKALFDS--------MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ ++ ++F S +P WNAMISG GH EEA+ LF ++ + I +
Sbjct: 315 CVTESWSVFVSNFSGCGVNLP------WNAMISGFTISGHGEEAMLLFLRMCQNNIKRDV 368
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
T+ L++ ++ +Q+ G + + I + ++D +CG++ +L
Sbjct: 369 YTYCSTLNSIADMRSLEYVKQLHGMIWKSGSI--GVSLCNALMDAYAKCGELDAMRKLFD 426
Query: 378 RMVWKP-DVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVLSNMYAEAES 434
W+ + + W L+ A E A V ++ + +PN V S + A S
Sbjct: 427 --TWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQ----VTFSGVLASCAS 480
Query: 435 M 435
+
Sbjct: 481 L 481
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 231/425 (54%), Gaps = 9/425 (2%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSG--DLSYATRL 71
P PL C S+ L Q+HA + + +RLL C +G L+YA ++
Sbjct: 24 PQHPLLSHLPHCTSLRGLAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHLAYARQV 83
Query: 72 FNSIQSPNHFMW-NTLIRAQASSLNPDKA-----IFLYMNMRRTGFAPNQHTFTFVLKAC 125
F+ + P+ +W NTL+R A S + + + +++ M G AP+ +TF +LKAC
Sbjct: 84 FDRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSLLKAC 143
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
+ R+ +Q H K G +V L+ Y+ D AR F + +
Sbjct: 144 AAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCVVSYN 203
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
MI+ +S R EAL+LF +M +G P VT+ SVLSACA G L+LG +H +V+
Sbjct: 204 AMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKL 263
Query: 246 GFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
G + TALV MY K G+L A A+F M R+ W+ MI A+HG+ EA+ LF
Sbjct: 264 GLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISLF 323
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
+++K+ + P+DITF+G+L AC H+G + G + F MK +GI P I+HYGC+ DLL R
Sbjct: 324 EEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKD-HGIVPGIKHYGCVTDLLAR 382
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G++ A + I + P ++W LL+AC HG++E+ +RV + I+ L+ ++ G YV+
Sbjct: 383 SGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIF 442
Query: 426 SNMYA 430
SN+ A
Sbjct: 443 SNLCA 447
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 232/405 (57%), Gaps = 15/405 (3%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
++ HA ++ +D F + L+ A S + LS A ++F+ + + + WNT + A
Sbjct: 220 VRGAHAHVVKLGSAEDTFVGNALID--AYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAM 277
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
D A ++ M P + T ++ ++ K G +
Sbjct: 278 VRQGEVDAARSMFDEM------PEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRN--- 328
Query: 151 HVVN--CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
VV+ +V Y D+ AR +FD++ + L WT M+S AQ EA LF +M+
Sbjct: 329 -VVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMM 387
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
E + + + S+L+ACA+SG L LG+++H V+ R ++ AL+ M+ K G +
Sbjct: 388 DAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVN 447
Query: 269 KAKALFDS-MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A +FD+ + E+++ +WN +I G A HG E+AL+LF +++++ P+ +T + VLSAC
Sbjct: 448 RADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSAC 507
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G ++ GR+ F +M+ YGI+P+IEHYGCMVDLLGR G + EA ++IKRM W+P+ V+
Sbjct: 508 THMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVI 567
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WG+LL+AC+ H N+E AE V E+ L+P++ G Y VLSN+YAEA
Sbjct: 568 WGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEA 612
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 187/386 (48%), Gaps = 24/386 (6%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCAL-----SSSGDLSYATRLFNSIQSPNHFM 82
+ ++++HAQ++ +D AS+L+A AL + S A L NS P+
Sbjct: 111 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNS-PFPSSTT 169
Query: 83 WNTLIRAQASSLN--PDK--AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
T +A +LN P A+FL + +R+ G T++F++KA + L + H
Sbjct: 170 LLTKTLLRAYALNSLPHAALAVFLDVPLRQRG----TFTYSFLIKALAAA-GLTPVRGAH 224
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
HV K G D V N L+ YS + L++A++VFDE+ R + W T ++ + +
Sbjct: 225 AHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVD 284
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
A +FD+M E ++V+ ++L A++G E + +F +M G + + +V
Sbjct: 285 AARSMFDEMP----EKDTVSWNTMLDGYAKAG--EAEKAFELFQRMPG--RNVVSWSTVV 336
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
Y K G + A+ +FD MP +N+ TW M+S A G EEA LF ++ I + I
Sbjct: 337 SAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVI 396
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
V +L+AC +G + +G++I + R + ++D+ +CG V A+ +
Sbjct: 397 AVVSILAACAESGSLALGKRIHRHV-RQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDT 455
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVA 404
+ + D+V W ++ HG E A
Sbjct: 456 EIVEKDLVSWNIIIGGFAMHGPGEKA 481
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 143/324 (44%), Gaps = 56/324 (17%)
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE--------IRNRTLN 182
L +++H + K GL D H + L+ Y++ + R VF + T
Sbjct: 111 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTL 170
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL-GEKVHVF 241
+ T++ YA + + AL +F + + + + T + ++ A A +G + G HV
Sbjct: 171 LTKTLLRAYALNSLPHAALAVFLDVPLR--QRGTFTYSFLIKALAAAGLTPVRGAHAHV- 227
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAK------------------------------ 271
VK+ G +G AL+ Y+KN L+ AK
Sbjct: 228 VKL-GSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAA 286
Query: 272 -ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
++FD MPE++ +WN M+ G A G AE+A +LF+++ +V ++ V+SA C
Sbjct: 287 RSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVV----SWSTVVSAYCKK 342
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV---WKPDVVM 387
G +++ R IF M + + MV + G V EA L M+ + DV+
Sbjct: 343 GDMEMARVIFDKMP-----AKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIA 397
Query: 388 WGALLAACKNHGNIEVAERVVKEI 411
++LAAC G++ + +R+ + +
Sbjct: 398 VVSILAACAESGSLALGKRIHRHV 421
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 213/380 (56%), Gaps = 3/380 (0%)
Query: 60 SSSGDLSYATRLF--NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
S G L A +F N I + WN +I + S +A+ LY+ M + G + +T
Sbjct: 368 SKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYT 427
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDL-DLHVVNCLVRCYSVSSDLNNARQVFDEI 176
+ V A + +SL + +H V K GLDL + V N + YS L + R+VFD +
Sbjct: 428 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 487
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
R + WTT+++ Y+QS EAL F M EGF PN T +SVL +CA LE G
Sbjct: 488 EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGR 547
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+VH + G + + +AL+ MY K G++ +A +FD + +I +W A+ISG A HG
Sbjct: 548 QVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHG 607
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
E+AL LFR++E I N +T + VL AC H G ++ G F M+ YG+ P++EHY
Sbjct: 608 LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHY 667
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEP 416
C++DLLGR G++ +A E I++M +P+ ++W LL C+ HGN+E+ E ++I+++ P
Sbjct: 668 ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRP 727
Query: 417 NNHGVYVVLSNMYAEAESMK 436
YV+LSN Y E S +
Sbjct: 728 EYSATYVLLSNTYIETGSYE 747
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGL-DLDLHVV-NCLVRCYSVSSDLNNARQVFDEIRN 178
VL+ C+ S+ K +H V KS D DL V+ N YS S+ A VFDE+
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 179 RTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKV 238
R + WT MI G + + F +ML G P+ ++++ +C LELG+ V
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 239 HVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
H + MRGF + T+L++MY K G++ + +F+ M E N +WNAMISG S+G
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303
Query: 299 EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EA DLF +++ PN T V V A +++G+++ + GIE +
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASEL-GIEGNVLVGTA 362
Query: 359 MVDLLGRCGKVLEAEELI 376
++D+ +CG + +A +
Sbjct: 363 LIDMYSKCGSLHDARSVF 380
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 129/248 (52%), Gaps = 10/248 (4%)
Query: 58 ALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHT 117
A S G L ++F+ ++ + W TL+ A + S ++A+ + MR GFAPNQ T
Sbjct: 470 AYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFT 529
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
F+ VL +C+++ L +Q+H + K+GLD + + + L+ Y+ + A +VFD+I
Sbjct: 530 FSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS 589
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
N + WT +ISGYAQ +AL LF +M + G + N+VTL VL AC+ G +E E
Sbjct: 590 NPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE--EG 647
Query: 238 VHVFVKMR-GF----EMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISG 291
+ F +M G+ EM ++ + + G L A MP E N W ++ G
Sbjct: 648 LFYFQQMEDGYGVVPEMEHY--ACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 705
Query: 292 LASHGHAE 299
HG+ E
Sbjct: 706 CRVHGNVE 713
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 156/338 (46%), Gaps = 5/338 (1%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
S + A +F+ + N F W +I + M +G P++ ++
Sbjct: 166 SKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS 225
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
++++C + SL K +H + G + V L+ Y+ + ++ VF+ +
Sbjct: 226 AIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEH 285
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
W MISG + EA LF +M PN TL SV A + + +G++V
Sbjct: 286 NQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQ 345
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDS-MPERNIAT-WNAMISGLASHGH 297
G E ++GTAL+ MY+K G+L A+++FD+ + T WNAMISG + G
Sbjct: 346 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC 405
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY- 356
++EAL+L+ ++ + I + T+ V +A + + GR + G + + G++ +
Sbjct: 406 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKC-GLDLMVVSVN 464
Query: 357 GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
+ D +CG + + ++ RM + D+V W L+ A
Sbjct: 465 NAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA 501
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMG--AILGTALVHMYTKNGALAKAKALFDS 276
L VL CA+ G + + VH V FE +L H+Y+K A +FD
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180
Query: 277 MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
MP+RN+ +W MI G HG + F ++ I+P+ + ++ +C +++G
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 240
Query: 337 RQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACK 396
+ + + + G I ++++ + G + E + M+ + + V W A+++ C
Sbjct: 241 KMVHAQIV-MRGFATHIFVSTSLLNMYAKLGSI-EDSYWVFNMMTEHNQVSWNAMISGCT 298
Query: 397 NHG 399
++G
Sbjct: 299 SNG 301
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 232/405 (57%), Gaps = 15/405 (3%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
++ HA ++ +D F + L+ A S + LS A ++F+ + + + WNT + A
Sbjct: 148 VRGAHAHVVKLGSAEDTFVGNALID--AYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAM 205
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
D A ++ M P + T ++ ++ K G +
Sbjct: 206 VRQGEVDAARSMFDEM------PEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRN--- 256
Query: 151 HVVN--CLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
VV+ +V Y D+ AR +FD++ + L WT M+S AQ EA LF +M+
Sbjct: 257 -VVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMM 315
Query: 209 MEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALA 268
E + + + S+L+ACA+SG L LG+++H V+ R ++ AL+ M+ K G +
Sbjct: 316 DAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVN 375
Query: 269 KAKALFDS-MPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
+A +FD+ + E+++ +WN +I G A HG E+AL+LF +++++ P+ +T + VLSAC
Sbjct: 376 RADYIFDTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSAC 435
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
H G ++ GR+ F +M+ YGI+P+IEHYGCMVDLLGR G + EA ++IKRM W+P+ V+
Sbjct: 436 THMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVI 495
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WG+LL+AC+ H N+E AE V E+ L+P++ G Y VLSN+YAEA
Sbjct: 496 WGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEA 540
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 188/386 (48%), Gaps = 24/386 (6%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCAL-----SSSGDLSYATRLFNSIQSPNHFM 82
+ ++++HAQ++ +D AS+L+A AL + S A L NS P+
Sbjct: 39 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNS-PFPSSTT 97
Query: 83 WNTLIRAQASSLN--PDK--AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
T +A +LN P A+FL + +R+ G T++F++KA + L + H
Sbjct: 98 LLTKTLLRAYALNSLPHAALAVFLDVPLRQRG----TFTYSFLIKALAAA-GLTPVRGAH 152
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
HV K G D V N L+ YS + L++A++VFDE+ R + W T ++ + +
Sbjct: 153 AHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVD 212
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
A +FD+M E ++V+ ++L A++G E + +F +M G + + + +V
Sbjct: 213 AARSMFDEMP----EKDTVSWNTMLDGYAKAG--EAEKAFELFQRMPGRNV--VSWSTVV 264
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
Y K G + A+ +FD MP +N+ TW M+S A G EEA LF ++ I + I
Sbjct: 265 SAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVI 324
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
V +L+AC +G + +G++I + R + ++D+ +CG V A+ +
Sbjct: 325 AVVSILAACAESGSLALGKRIHRHV-RQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDT 383
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVA 404
+ + D+V W ++ HG E A
Sbjct: 384 EIVEKDLVSWNIIIGGFAMHGPGEKA 409
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 143/324 (44%), Gaps = 56/324 (17%)
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE--------IRNRTLN 182
L +++H + K GL D H + L+ Y++ + R VF + T
Sbjct: 39 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTL 98
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL-GEKVHVF 241
+ T++ YA + + AL +F + + + + T + ++ A A +G + G HV
Sbjct: 99 LTKTLLRAYALNSLPHAALAVFLDVPLR--QRGTFTYSFLIKALAAAGLTPVRGAHAHV- 155
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAK------------------------------ 271
VK+ G +G AL+ Y+KN L+ AK
Sbjct: 156 VKL-GSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAA 214
Query: 272 -ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
++FD MPE++ +WN M+ G A G AE+A +LF+++ +V ++ V+SA C
Sbjct: 215 RSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVV----SWSTVVSAYCKK 270
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV---WKPDVVM 387
G +++ R IF M + + MV + G V EA L M+ + DV+
Sbjct: 271 GDMEMARVIFDKMP-----AKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIA 325
Query: 388 WGALLAACKNHGNIEVAERVVKEI 411
++LAAC G++ + +R+ + +
Sbjct: 326 VVSILAACAESGSLALGKRIHRHV 349
>gi|326491225|dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 199/304 (65%), Gaps = 8/304 (2%)
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDE-IRNRTLNVWTTMISGYAQ 193
+++H V ++G+ LD+ N LV Y+ D A + F + + L W TMIS +A+
Sbjct: 184 REVHRRVLEAGVALDVVACNALVDMYAKCGDSAAALRCFRTMVPTKNLVTWNTMISAHAR 243
Query: 194 SFRANEALMLFDQMLME-----GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
+ EAL LF +ML + P+ T +VL ACA+ G L+ G VH ++ G +
Sbjct: 244 AGELQEALELFREMLQQQGCTSSPLPDDATFVAVLGACARLGALDAGRWVHAYIVRTGRD 303
Query: 249 MGA-ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
A ++G AL+ MY K GA+ +A +FD+M R++ T+ +MISGLA HG EEAL LF
Sbjct: 304 AAAGVVGNALIDMYAKCGAVEQAAEVFDAMTRRDVYTYTSMISGLAMHGRGEEALALFGD 363
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ + ++ PN++TF+GVLSACCHAG I+ G + F +M ++G+ P IEHYGC+VD+LGR G
Sbjct: 364 MRQARVRPNEVTFLGVLSACCHAGNIEDGLRHFDAMAELHGVTPGIEHYGCVVDMLGRAG 423
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSN 427
++ EAEEL+ M +PD ++WG+LLAAC+ HG+++ AERV++ +A + ++ G YV++SN
Sbjct: 424 RLDEAEELVSVMPIRPDAIIWGSLLAACRAHGHVDRAERVMRR-MAEDEDDAGDYVLMSN 482
Query: 428 MYAE 431
MYA+
Sbjct: 483 MYAQ 486
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 159/329 (48%), Gaps = 14/329 (4%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS-IQSPNHFMWNTLIRAQ 90
+++H +++ + D A + L+ A GD + A R F + + + N WNT+I A
Sbjct: 184 REVHRRVLEAGVALDVVACNALVDMYA--KCGDSAAALRCFRTMVPTKNLVTWNTMISAH 241
Query: 91 ASSLNPDKAIFLYMNM-RRTGFA----PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
A + +A+ L+ M ++ G P+ TF VL AC+ + +L+ + +H ++ ++G
Sbjct: 242 ARAGELQEALELFREMLQQQGCTSSPLPDDATFVAVLGACARLGALDAGRWVHAYIVRTG 301
Query: 146 LDLDLHVV-NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
D VV N L+ Y+ + A +VFD + R + +T+MISG A R EAL LF
Sbjct: 302 RDAAAGVVGNALIDMYAKCGAVEQAAEVFDAMTRRDVYTYTSMISGLAMHGRGEEALALF 361
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELG-EKVHVFVKMRGFEMGAILGTALVHMYTK 263
M PN VT VLSAC +G +E G ++ G G +V M +
Sbjct: 362 GDMRQARVRPNEVTFLGVLSACCHAGNIEDGLRHFDAMAELHGVTPGIEHYGCVVDMLGR 421
Query: 264 NGALAKAKALFDSMPERNIA-TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVG 322
G L +A+ L MP R A W ++++ +HGH + A + R++ +++ D +
Sbjct: 422 AGRLDEAEELVSVMPIRPDAIIWGSLLAACRAHGHVDRAERVMRRMAEDEDDAGDYVLMS 481
Query: 323 VLSA--CCHAGFIDVGRQI-FGSMKRVYG 348
+ A H + V RQ+ G + +V G
Sbjct: 482 NMYAQEGRHGKAVQVRRQMRRGKVDKVPG 510
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 146/332 (43%), Gaps = 16/332 (4%)
Query: 87 IRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNC--CKQIHTHVSKS 144
+R+ + NP A L ++ R G + VLK + S C +H H +K
Sbjct: 28 LRSPGRASNPGTAPPLAASLLRHGAPHDAGALRAVLKRLAATASAPCEAAPALHAHSAKL 87
Query: 145 GLDLDLH-VVNCLVRCYSVSSDLNNARQVFDEIRN---RTLNVWTTMISGYAQSFRANEA 200
GL V + LV Y A +F + WT M++ +A+ EA
Sbjct: 88 GLYRHHRGVRDALVALYLACGRRGVASDLFAGAGGGPAPDVVSWTAMVTWHARLGLFREA 147
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGC-LELGEKVHVFVKMRGFEMGAILGTALVH 259
LF M +G A+ A L L +VH V G + + ALV
Sbjct: 148 AELFLAMADDGAVVVDAVAAAAAFAACAGAGELVLAREVHRRVLEAGVALDVVACNALVD 207
Query: 260 MYTKNGALAKAKALFDSM-PERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ-----I 313
MY K G A A F +M P +N+ TWN MIS A G +EAL+LFR++ ++Q
Sbjct: 208 MYAKCGDSAAALRCFRTMVPTKNLVTWNTMISAHARAGELQEALELFREMLQQQGCTSSP 267
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG-CMVDLLGRCGKVLEA 372
+P+D TFV VL AC G +D GR + + R G + G ++D+ +CG V +A
Sbjct: 268 LPDDATFVAVLGACARLGALDAGRWVHAYIVRT-GRDAAAGVVGNALIDMYAKCGAVEQA 326
Query: 373 EELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
E+ M + DV + ++++ HG E A
Sbjct: 327 AEVFDAMTRR-DVYTYTSMISGLAMHGRGEEA 357
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 225/406 (55%), Gaps = 7/406 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
KQ+H + S D A+ L+ S G +A +FN ++ + WN++I + A
Sbjct: 306 KQVHGIAVKSGLDSDVSVANSLVNM--YSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL-----KACSNVRSLNCCKQIHTHVSKSGL 146
S ++++ L++++ G P+ T + KAC + L+ KQIH H K+G
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423
Query: 147 DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
D DLHV + ++ Y D+ NA VF+ I WT+MISG + ++AL ++ +
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M P+ T A+++ A + LE G ++H V +GT+LV MY K G
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ A LF M RNIA WNAM+ GLA HG+AEEA++LF+ ++ I P+ ++F+G+LSA
Sbjct: 544 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 603
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG + SM YGIEP+IEHY C+VD LGR G V EA+++I+ M +K
Sbjct: 604 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASAS 663
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ ALL AC+ G++E +RV + ALEP + YV+LSN+YA A
Sbjct: 664 INRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAA 709
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 196/396 (49%), Gaps = 19/396 (4%)
Query: 27 SMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
S H L K HA++++S DHF ++ LL S G LS A ++F++ + W
Sbjct: 89 STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTM--YSKCGSLSSARQVFDTTPERDLVTW 146
Query: 84 NTLIRAQASSL-----NPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
N ++ A A+S+ N + + L+ +R + + + T VLK C N L + +H
Sbjct: 147 NAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVH 206
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
+ K GL+ D+ V LV YS + +AR +FD +R R + +W M+ GY Q
Sbjct: 207 GYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEK 266
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGC--LELGEKVHVFVKMRGFEMGAILGTA 256
EA LF + G P+ ++ +L+ C +G LELG++VH G + + +
Sbjct: 267 EAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANS 326
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
LV+MY+K G A+ +F+ M ++ +WN+MIS A EE+++LF L E + P+
Sbjct: 327 LVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPD 386
Query: 317 -----DITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
IT AC +D G+QI + G + + ++D+ +CG ++
Sbjct: 387 HFTLASITLATAAKACGCLVLLDQGKQIHAHAIKA-GFDSDLHVNSGILDMYIKCGDMVN 445
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERV 407
A ++ + PD V W ++++ C ++GN + A R+
Sbjct: 446 A-GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 480
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 9/282 (3%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+L+ + +L K H + SG D + N L+ YS L++ARQVFD R
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 181 LNVWTTMISGYAQSFRAN-----EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
L W ++ YA S +N E L LF + +TLA VL C SGCL
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASH 295
E VH + G E + ALV++Y+K G + A+ LFD M ER++ WN M+ G
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFID--VGRQIFGSMKRVYGIEPKI 353
G +EA LF + + + P++ + +L+ C AG D +G+Q+ G + G++ +
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKS-GLDSDV 321
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
+V++ + G A E+ M D++ W +++++C
Sbjct: 322 SVANSLVNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISSC 362
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 10/218 (4%)
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
L LG+ H + + G L L+ MY+K G+L+ A+ +FD+ PER++ TWNA++
Sbjct: 93 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152
Query: 292 LAS-----HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
A+ G+A+E L LFR L +T VL C ++G + + G ++
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 212
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
G+E + G +V++ +CG++ +A L M + DVV+W +L G + A +
Sbjct: 213 -GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLKGYVQLGLEKEAFQ 270
Query: 407 VVKEI--IALEPNNHGVYVVLSN-MYAEAESMKMQLEI 441
+ E L P+ V ++L+ ++A + +++ ++
Sbjct: 271 LFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQV 308
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 210/371 (56%), Gaps = 2/371 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L A +F+ ++ + WN++I A+ ++ MR +G +P+ T +
Sbjct: 218 GMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLA 277
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVV-NCLVRCYSVSSDLNNARQVFDEIRNRTL 181
A + K +H +V + G D+D + N +V Y+ S++ A+++FD + +
Sbjct: 278 SAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDS 337
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLM-EGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
W T+I+GY Q+ ANEA+ + M EG + T SVL A + G L+ G ++H
Sbjct: 338 VSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHA 397
Query: 241 FVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEE 300
G + +GT L+ +Y K G LA+A LF+ MP R+ WNA+ISGL HGH E
Sbjct: 398 LSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAE 457
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
AL LF ++++E I P+ +TFV +L+AC HAG +D GR F M+ Y I P +HY CM
Sbjct: 458 ALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMA 517
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHG 420
D+LGR G++ EA I+ M KPD +WGALL AC+ HGN+E+ + + + L+P N G
Sbjct: 518 DMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVG 577
Query: 421 VYVVLSNMYAE 431
YV++SNMYA+
Sbjct: 578 YYVLMSNMYAK 588
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 9/320 (2%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
NTLI A + + P A L ++ F P+ TF +++A + S Q+H
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93
Query: 142 SKSGL-DLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
+ GL + LV Y ++ A +VFDE+ R + W M+SG ++ RA EA
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ LF +M+ EG ++VT++SVL C G L +HV+ G + + AL+ +
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G L +A+ +F M R++ TWN++ISG G AL +F+ + + P+ +T
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273
Query: 321 VGVLSACCHAGFIDVGRQIFGS-MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
V + SA G + + M+R + ++ I +VD+ + + A+ + M
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMFDSM 332
Query: 380 VWKPDVVMWGALLAACKNHG 399
+ D V W L+ +G
Sbjct: 333 PVQ-DSVSWNTLITGYMQNG 351
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 214/412 (51%), Gaps = 39/412 (9%)
Query: 58 ALSSSGDLSYATRLFNSIQS----PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP 113
A +S GD A L ++S PN WN L+ S A+ + M GF P
Sbjct: 95 AHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLP 154
Query: 114 NQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ + L A +V + +Q+H +V K+G LD V L+ Y + +VF
Sbjct: 155 DATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVF 214
Query: 174 DEI---------------------------------RNRTLNV--WTTMISGYAQSFRAN 198
DE R LNV WT++++ Q+ R
Sbjct: 215 DESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDL 274
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EA+ LF +M EG EPNSVT+ VL A A L G H F +GF +G+ALV
Sbjct: 275 EAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALV 334
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
MY K G + A+ +F++MP RN+ +WNAMI G A HG AE A+ LFR ++ + P+ +
Sbjct: 335 DMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLV 394
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TF VL AC AG+ + GR F M+ +GI P++EHY CMV LLGR GK+ +A ++I +
Sbjct: 395 TFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQ 454
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
M ++PD +WG+LL +C+ HGN+ +AE + + LEP N G YV+LSN+YA
Sbjct: 455 MPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYA 506
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 160/380 (42%), Gaps = 83/380 (21%)
Query: 106 MRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD 165
+R F P+ LK+CS +R + +H + +G+ D V + L+ Y
Sbjct: 14 LRHVSFPPDPRLLPSALKSCSALRLA---RALHAAAAVAGVSRDAFVASSLLHAYLRFGA 70
Query: 166 LNNARQVFDEIRNRTL---------------------------------NV--WTTMISG 190
+AR V D + +RT+ NV W ++SG
Sbjct: 71 TADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSG 130
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
+S RA +A++ +M EGF P++ ++ LSA G + +GE++H +V G +
Sbjct: 131 LNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLD 190
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL-------- 302
A + TAL+ MY K G + +FD ++A+ NA+++GL+ + EAL
Sbjct: 191 ACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVG 250
Query: 303 ---------------------------DLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
DLFR+++ E I PN +T VL A F ++
Sbjct: 251 RGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPA-----FANI 305
Query: 336 GRQIFGSMKRVYGIEPKIEH----YGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ G + + H +VD+ +CG+V +A + + M ++ +VV W A+
Sbjct: 306 AALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAM 364
Query: 392 LAACKNHGNIEVAERVVKEI 411
+ HG E A R+ + +
Sbjct: 365 IGGYAMHGEAENAVRLFRSM 384
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 249/481 (51%), Gaps = 55/481 (11%)
Query: 7 SLRQPPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLAFCALSSSG 63
SL+ P I +++L C S+ L KQ+H + + + D F + L++ A S
Sbjct: 227 SLKLRPDAITLVNILP-ACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSK- 284
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIR--AQASSLNPDKAIF-------------------- 101
++ A ++F I+ + WN ++ +Q S + ++F
Sbjct: 285 -MNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIA 343
Query: 102 -------------LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
++ M+ G PN T +L C++V +L KQ H +V K+ L+L
Sbjct: 344 GYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNL 403
Query: 149 -------DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV--WTTMISGYAQSFRANE 199
DL V+N L+ Y+ AR +FD I + NV WT MI GYAQ AN+
Sbjct: 404 NWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEAND 463
Query: 200 ALMLFDQMLME--GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL--GT 255
AL LF Q+ + +PN+ TL+ L ACA+ G L LG ++H + +R +L G
Sbjct: 464 ALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYA-LRNENESEVLYVGN 522
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
L+ MY+K+G + A+A+FD+M RN+ +W ++++G HG EEAL LF +++K
Sbjct: 523 CLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAV 582
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
+ ITF+ VL AC H+G +D G F M + +GI P EHY CMVDLLGR G++ EA EL
Sbjct: 583 DGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMEL 642
Query: 376 IKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESM 435
IK M +P V+W ALL+A + H NIE+ E ++ L N G Y +LSN+YA A
Sbjct: 643 IKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRW 702
Query: 436 K 436
K
Sbjct: 703 K 703
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 212/454 (46%), Gaps = 57/454 (12%)
Query: 6 SSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDL 65
S+ P IP +SLL +CK++ K H Q+ + + A C S+ +
Sbjct: 22 STFTTSPPTIPLISLLR-QCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEA-V 79
Query: 66 SYATRLFNSIQSPNH---FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
S RL P+H F WN LIR D + Y M+R G+ P+ +TF FVL
Sbjct: 80 SLLQRLI-----PSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVL 134
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
KAC + SL +H V +GL ++ + N +V Y L++A Q+FDE+ R +
Sbjct: 135 KACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIE 194
Query: 183 ---VWTTMISGYAQSFRANEALMLFDQM---LMEGFEPNSVTLASVLSACAQSGCLELGE 236
W ++++ Y Q ++ AL + +M P+++TL ++L ACA L+ G+
Sbjct: 195 DIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGK 254
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
+VH F G +G ALV MY K + +A +F+ + ++++ +WNAM++G + G
Sbjct: 255 QVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIG 314
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF----IDVGRQIFGSMKRVYGIEPK 352
+ AL LF+ +++E I + IT+ V++ G +DV RQ+ ++YG+EP
Sbjct: 315 SFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-----QLYGLEPN 369
Query: 353 IEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ + LL C V GALL + H V+K I+
Sbjct: 370 VV---TLASLLSGCASV-------------------GALLYGKQTHA------YVIKNIL 401
Query: 413 ALEPNNHG----VYVVLSNMYAEAESMKMQLEIL 442
L N+ V L +MYA+ +S ++ I
Sbjct: 402 NLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIF 435
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 236/407 (57%), Gaps = 10/407 (2%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
+H ++ S QD F A++L+ G + A ++F+ + ++WN L RA A
Sbjct: 100 VHRCLVDSGFDQDPFLATKLINM--YYELGSIDRALKVFDETRERTIYVWNALFRALAMV 157
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC-----KQIHTHVSKSGLDL 148
+ + + LY+ M G ++ T+T+VLKAC V L+ C K+IH H+ + G +
Sbjct: 158 GHGKELLDLYIQMNWIGTPSDRFTYTYVLKACV-VSELSVCPLRKGKEIHAHILRHGYEA 216
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++HV+ L+ Y+ ++ A VF + + W+ MI+ +A++ +AL LF M+
Sbjct: 217 NIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMM 276
Query: 209 MEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
E PNSVT+ ++L ACA LE G+ +H ++ R + + AL+ MY + G
Sbjct: 277 FEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGE 336
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
+ + +FD+M +R++ +WN++IS HG ++A+ +F + + + P+ I+F+ VL A
Sbjct: 337 VLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGA 396
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C HAG ++ G+ +F SM Y I P +EHY CMVDLLGR ++ EA +LI+ M ++P
Sbjct: 397 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPT 456
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+WG+LL +C+ H N+E+AER + LEP N G YV+L+++YAEA+
Sbjct: 457 VWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAK 503
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 179/372 (48%), Gaps = 22/372 (5%)
Query: 47 HFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNM 106
H ++ ++F +L+ S +L N I S N N LI++ N +A+ L
Sbjct: 24 HVSSRVPVSFVSLNPSANL------INDINSNN----NQLIQSLCKGGNLKQALHLLC-- 71
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
P Q TF ++ +C+ SL+ +H + SG D D + L+ Y +
Sbjct: 72 --CEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSI 129
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+ A +VFDE R RT+ VW + A E L L+ QM G + T VL AC
Sbjct: 130 DRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKAC 189
Query: 227 AQSGC----LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
S L G+++H + G+E + T L+ +Y K G+++ A ++F +MP +N
Sbjct: 190 VVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNF 249
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQI--VPNDITFVGVLSACCHAGFIDVGRQIF 340
+W+AMI+ A + +AL+LF+ + E VPN +T V +L AC ++ G+ I
Sbjct: 250 VSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIH 309
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
G + R ++ + ++ + GRCG+VL + + M K DVV W +L++ HG
Sbjct: 310 GYILR-RQLDSILPVLNALITMYGRCGEVLMGQRVFDNMK-KRDVVSWNSLISIYGMHGF 367
Query: 401 IEVAERVVKEII 412
+ A ++ + +I
Sbjct: 368 GKKAIQIFENMI 379
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 229/415 (55%), Gaps = 6/415 (1%)
Query: 21 LADKCKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L +C + +LK+ +H ++ S+ D + LL A G L A RLF+ +
Sbjct: 80 LLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYA--RCGSLEGARRLFDEMPH 137
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQI 137
+ W ++I A + A+ L+ M G PN+ T + ++K C + S NC +QI
Sbjct: 138 RDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQI 197
Query: 138 HTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRA 197
H K G ++ V + LV Y+ L A VFD++ + W +I+GYA+
Sbjct: 198 HACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEG 257
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
EAL LF +M EG+ P T +++LS+C+ GCLE G+ +H + ++ +G L
Sbjct: 258 EEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTL 317
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+HMY K+G++ A+ +FD + + ++ + N+M+ G A HG +EA F ++ + I PND
Sbjct: 318 LHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPND 377
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
ITF+ VL+AC HA +D G+ FG M++ Y IEPK+ HY +VDLLGR G + +A+ I+
Sbjct: 378 ITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIE 436
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
M +P V +WGALL A K H N E+ + + L+P+ G + +L+N+YA A
Sbjct: 437 EMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASA 491
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 171/310 (55%), Gaps = 8/310 (2%)
Query: 113 PNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV 172
P++ + +LK C+ + L K +H HV S DL + N L+ Y+ L AR++
Sbjct: 72 PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRL 131
Query: 173 FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
FDE+ +R + WT+MI+GYAQ+ RA++AL+LF +ML +G EPN TL+S++ C
Sbjct: 132 FDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASY 191
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
G ++H G +G++LV MY + G L +A +FD + +N +WNA+I+G
Sbjct: 192 NCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGY 251
Query: 293 ASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPK 352
A G EEAL LF ++++E P + T+ +LS+C G ++ G+ + + + K
Sbjct: 252 ARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS---SQK 308
Query: 353 IEHY--GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
+ Y ++ + + G + +AE++ ++V K DVV ++L HG + A + E
Sbjct: 309 LVGYVGNTLLHMYAKSGSIRDAEKVFDKLV-KVDVVSCNSMLIGYAQHGLGKEAAQQFDE 367
Query: 411 II--ALEPNN 418
+I +EPN+
Sbjct: 368 MIRFGIEPND 377
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
S + L + D + EP+ ++L C Q G L+ G+ VH V F+ ++
Sbjct: 52 SLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVI 111
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
+L+ MY + G+L A+ LFD MP R++ +W +MI+G A + A +AL LF ++ +
Sbjct: 112 QNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGA 171
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN+ T ++ C + + GRQI + YG + +VD+ RCG + EA
Sbjct: 172 EPNEFTLSSLVKCCGYMASYNCGRQIHACCWK-YGCHSNVFVGSSLVDMYARCGYLGEAM 230
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
+ ++ K +V W AL+A G E A
Sbjct: 231 LVFDKLGCKNEVS-WNALIAGYARKGEGEEA 260
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 247/431 (57%), Gaps = 5/431 (1%)
Query: 4 KCSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRI-QDHFAASRLLAFCALSSS 62
+C + +P L +S+ + M + IHA ++I RI ++ F + L+ + S
Sbjct: 120 ECGIVPKPELVASVVSVCV-RLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDW--YFKS 176
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
GD A R+F+ I+ N W L+ +++L+ + A+ + M+ G PN+ T +L
Sbjct: 177 GDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAIL 236
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD-LNNARQVFDEIRNRTL 181
A + + K+IH + + G DLD H ++ L+ Y S + L A+ F+ + +
Sbjct: 237 PAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDV 296
Query: 182 NVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVF 241
+W+++I Y +S + EAL LF M +G EPNSVTL +V++AC L+ G H +
Sbjct: 297 VMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGY 356
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEA 301
+ G +G AL++MY+K G + + +F M ++ +W+ +I+ HGH +EA
Sbjct: 357 IVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEA 416
Query: 302 LDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
L LF +++ + + P+ +TF+ VLSAC H+G + G+QIF ++K+ + +EHY C+VD
Sbjct: 417 LCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVD 476
Query: 362 LLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGV 421
LLG+ GKV +A ++++ M KP +W +L++ACK HG +E+AER+ +E+I EP+N
Sbjct: 477 LLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAAN 536
Query: 422 YVVLSNMYAEA 432
+ +LS +YAE+
Sbjct: 537 HTLLSMIYAES 547
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 163/329 (49%), Gaps = 6/329 (1%)
Query: 102 LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS 161
Y + + N + V+KACS + Q+++ V KSGLD D + N + Y+
Sbjct: 13 FYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFISFYA 72
Query: 162 VSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLAS 221
SS +A +VFD + + W +I+GY Q+ + ++F +M G P +AS
Sbjct: 73 KSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELVAS 132
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILG-TALVHMYTKNGALAKAKALFDSMPER 280
V+S C + G ++LG +H V + G I T+LV Y K+G A +FD + +
Sbjct: 133 VVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVK 192
Query: 281 NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIF 340
N+ +W A++SG +++ ALD FR ++ + PN +T + +L A G G++I
Sbjct: 193 NVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIH 252
Query: 341 GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA-CKNHG 399
G R +G + ++ + R + L+ +L DVVMW +++ + C++
Sbjct: 253 GYAFR-HGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSAD 311
Query: 400 NIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+IE A ++ + + A EPN+ + V++
Sbjct: 312 SIE-ALKLFRWMRADGTEPNSVTLLAVIT 339
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 4/246 (1%)
Query: 198 NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
++ L + ++ N+ + SV+ AC+ S C G +++ V G + ++ +
Sbjct: 8 HQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSF 67
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
+ Y K+ A +FD+MP ++ +WN +I+G +G+ + +F+++ + IVP
Sbjct: 68 ISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKP 127
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
V+S C G + +GR I + I +I +VD + G L A +
Sbjct: 128 ELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFD 187
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPNNHGVYVVLSNMYAEAESM 435
++ K +VV W AL++ C + + +A + +I + PN + +L +AE
Sbjct: 188 QIEVK-NVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILP-AFAELGCA 245
Query: 436 KMQLEI 441
K EI
Sbjct: 246 KTGKEI 251
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 226/403 (56%), Gaps = 4/403 (0%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
+HQ + +H +I + + F ++ LL G+L +A +F+ + + +W T+I
Sbjct: 282 LHQGRWMHGSVIKQGLMSNSFISAALLDM--YVKCGELDHARCVFDELSYIDLVLWTTMI 339
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+ NP A+ L+++ R APN T VL A + +R L+ K IH K GL
Sbjct: 340 VGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGL- 398
Query: 148 LDLHVV-NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQ 206
++ +VV N LV Y+ ++ A ++F I N+ + W +MISGYA++ ++ALMLF Q
Sbjct: 399 VEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQ 458
Query: 207 MLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
M ++G P+++++ + LSA G L +G+ +H + F + TAL+++Y K G
Sbjct: 459 MSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGD 518
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L A+ +FD M +RN TW AMI G G + ++ LF ++ K+ + PNDI F +LS
Sbjct: 519 LLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILST 578
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H+G + G++ F SM + + I P ++HY CMVD+L R G + +A E I M + D
Sbjct: 579 CSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTS 638
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
+WGA L C+ H ++ AE +K ++ L P +YV++SN+Y
Sbjct: 639 VWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLY 681
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 181/365 (49%), Gaps = 4/365 (1%)
Query: 64 DLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
DL A ++F I N W ++I + + L+ MR+ P+++T V+
Sbjct: 215 DLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVIT 274
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
ACS + L+ + +H V K GL + + L+ Y +L++AR VFDE+ L +
Sbjct: 275 ACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVL 334
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
WTTMI GY Q+ +AL LF PNSVT A+VLSA AQ L LG+ +H
Sbjct: 335 WTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAV 394
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
G ++G ALV MY K A+++A +F + +++ WN+MISG A + ++AL
Sbjct: 395 KLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALM 454
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF+++ + P+ I+ V LSA G + +G+ I G + + I +++L
Sbjct: 455 LFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVK-HAFVSNIYVDTALLNLY 513
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEPNNHGV 421
+CG +L A + M + + V W A++ G+ + + E++ + PN+
Sbjct: 514 NKCGDLLSARRVFDEMNDR-NSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAF 572
Query: 422 YVVLS 426
+LS
Sbjct: 573 TSILS 577
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 190/380 (50%), Gaps = 11/380 (2%)
Query: 21 LADKCKSMHQLKQIHAQMIISSR---IQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L C ++ L+ +HA+++ + + A ++LL+ ++ GDL+ A +F+
Sbjct: 68 LLPSCGTLLSLRVLHARLLTHPQGLLLGSLRARTKLLS--CYAALGDLASARMVFDGTPR 125
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP---NQHTFTFVLKACSNVRSLNCC 134
P+ + + ++ + A+ L+ +MRR P + + LKAC +
Sbjct: 126 PDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYG 185
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+ +H K G D V+N LV Y+ + DL AR+VF+ I +R + WT+MISG Q+
Sbjct: 186 RSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQN 244
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
A++ L+LF++M + P+ T+A+V++AC+ L G +H V +G + +
Sbjct: 245 GFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFIS 304
Query: 255 TALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV 314
AL+ MY K G L A+ +FD + ++ W MI G +G+ +AL LF I
Sbjct: 305 AALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIA 364
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEE 374
PN +T VLSA + +G+ I G ++ +E + +VD+ +C V EA+
Sbjct: 365 PNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVG-NALVDMYAKCQAVSEADR 423
Query: 375 LIKRMVWKPDVVMWGALLAA 394
+ R+ K DVV W ++++
Sbjct: 424 IFGRISNK-DVVAWNSMISG 442
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,215,270,080
Number of Sequences: 23463169
Number of extensions: 499799729
Number of successful extensions: 1325628
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9217
Number of HSP's successfully gapped in prelim test: 2769
Number of HSP's that attempted gapping in prelim test: 1166833
Number of HSP's gapped (non-prelim): 53078
length of query: 818
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 667
effective length of database: 8,816,256,848
effective search space: 5880443317616
effective search space used: 5880443317616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)