BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003457
(818 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 179/440 (40%), Positives = 263/440 (59%), Gaps = 38/440 (8%)
Query: 27 SMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
++ LKQ H MII+ +D+ ++ + C S++G L YA +F PN ++ NT+
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSVFTHQPCPNTYLHNTM 84
Query: 87 IRAQASSLNPDK---AIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
IRA + P+ AI +Y + P+ TF FVLK V + +QIH V
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW------------------- 184
G D +HVV L++ Y L +AR++FDE+ + +NVW
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 185 --------------TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSG 230
T +ISGYA+S RA+EA+ +F +MLME EP+ VTL +VLSACA G
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
LELGE++ +V RG L A++ MY K+G + KA +F+ + ERN+ TW +I+
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
GLA+HGH EAL +F ++ K + PND+TF+ +LSAC H G++D+G+++F SM+ YGI
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 351 PKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
P IEHYGCM+DLLGR GK+ EA+E+IK M +K + +WG+LLAA H ++E+ ER + E
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSE 444
Query: 411 IIALEPNNHGVYVVLSNMYA 430
+I LEPNN G Y++L+N+Y+
Sbjct: 445 LIKLEPNNSGNYMLLANLYS 464
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 332 bits (850), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 169/439 (38%), Positives = 258/439 (58%), Gaps = 32/439 (7%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNSIQSPNHFM 82
+C +LKQIHA+M+ + +QD +A ++ L+FC S+S D L YA +F+ P+ F+
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN +IR + S P++++ LY M + N +TF +LKACSN+ + QIH ++
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI-------------------------- 176
K G + D++ VN L+ Y+V+ + A +FD I
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 177 -----RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
+ WTTMISGY Q+ EAL LF +M EP++V+LA+ LSACAQ G
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LE G+ +H ++ M ++LG L+ MY K G + +A +F ++ ++++ W A+ISG
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISG 322
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HGH EA+ F +++K I PN ITF VL+AC + G ++ G+ IF SM+R Y ++P
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
IEHYGC+VDLLGR G + EA+ I+ M KP+ V+WGALL AC+ H NIE+ E + + +
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 442
Query: 412 IALEPNNHGVYVVLSNMYA 430
IA++P + G YV +N++A
Sbjct: 443 IAIDPYHGGRYVHKANIHA 461
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 39/330 (11%)
Query: 5 CSSLRQPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD 64
CSS P L + + QIHAQ+ D +A + L+ A+ +G+
Sbjct: 108 CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAV--TGN 165
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPD--------------------------- 97
A LF+ I P+ WN++I+ + D
Sbjct: 166 FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQA 225
Query: 98 ----KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVV 153
+A+ L+ M+ + P+ + L AC+ + +L K IH++++K+ + +D V+
Sbjct: 226 DMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMD-SVL 284
Query: 154 NC-LVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
C L+ Y+ ++ A +VF I+ +++ WT +ISGYA EA+ F +M G
Sbjct: 285 GCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI 344
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT--ALVHMYTKNGALAKA 270
+PN +T +VL+AC+ +G +E G K+ + R + + + +V + + G L +A
Sbjct: 345 KPNVITFTAVLTACSYTGLVEEG-KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 271 KALFDSMPER-NIATWNAMISGLASHGHAE 299
K MP + N W A++ H + E
Sbjct: 404 KRFIQEMPLKPNAVIWGALLKACRIHKNIE 433
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 323 bits (827), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 181/475 (38%), Positives = 264/475 (55%), Gaps = 58/475 (12%)
Query: 23 DKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSS--SGDLSYATRLFNSIQSPNH 80
+ C+++ L QIHA I S +++D AA+ +L FCA S DL YA ++FN + N
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC 90
Query: 81 FMWNTLIRAQASSLNPDKA---IFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQ 136
F WNT+IR + S + DKA I L+ M F PN+ TF VLKAC+ + KQ
Sbjct: 91 FSWNTIIRGFSES-DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 137 IHTHVSKSGLDLDLHVVNCLVRCYSVS--------------------------------- 163
IH K G D V++ LVR Y +
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 164 ------------SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
D AR +FD++R R++ W TMISGY+ + +A+ +F +M
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
PN VTL SVL A ++ G LELGE +H++ + G + +LG+AL+ MY+K G + KA
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ +P N+ TW+AMI+G A HG A +A+D F K+ + + P+D+ ++ +L+AC H G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ GR+ F M V G+EP+IEHYGCMVDLLGR G + EAEE I M KPD V+W AL
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
L AC+ GN+E+ +RV ++ + P++ G YV LSNMYA E M+++++
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
>sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730
OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1
Length = 501
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/413 (40%), Positives = 250/413 (60%), Gaps = 6/413 (1%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
C S+ L QIH Q+ +SS D F S L+ +LS + DL++A L WN
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWN 82
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
L R +SS +P ++I++Y M+R G PN+ TF F+LKAC++ L +QI V K
Sbjct: 83 MLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH 142
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
G D D++V N L+ Y ++AR+VFDE+ R + W ++++ ++ + N F
Sbjct: 143 GFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF 202
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+M+ + F P+ T+ +LSAC G L LG+ VH V +R E+ LGTALV MY K+
Sbjct: 203 CEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKS 260
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGV 323
G L A+ +F+ M ++N+ TW+AMI GLA +G AEEAL LF K+ KE V PN +TF+GV
Sbjct: 261 GGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGV 320
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L AC H G +D G + F M++++ I+P + HYG MVD+LGR G++ EA + IK+M ++P
Sbjct: 321 LCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEP 380
Query: 384 DVVMWGALLAACKNHGNIE---VAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
D V+W LL+AC H + + + E+V K +I LEP G V+++N +AEA
Sbjct: 381 DAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEAR 433
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 318 bits (814), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 253/405 (62%), Gaps = 6/405 (1%)
Query: 30 QLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRA 89
QL+Q+HA +I++ + ++L+ S+ ++Y LF S+ P+ F++N++I++
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLAC--SARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 90 QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLD 149
+ P + Y M + +P+ +TFT V+K+C+++ +L K +H H SG LD
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 150 LHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
+V LV YS D+ ARQVFD + +++ W +++SG+ Q+ A+EA+ +F QM
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
GFEP+S T S+LSACAQ+G + LG VH ++ G ++ LGTAL+++Y++ G + K
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKE-QIVPNDITFVGVLSACC 328
A+ +FD M E N+A W AMIS +HG+ ++A++LF K+E + +PN++TFV VLSAC
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 329 HAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV-- 386
HAG ++ GR ++ M + Y + P +EH+ CMVD+LGR G + EA + I ++
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 387 -MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+W A+L ACK H N ++ + K +IALEP+N G +V+LSN+YA
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 260/430 (60%), Gaps = 21/430 (4%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDH---FAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LA+ C M QLKQ+HA + ++ ++ F ++L SS D++YA R+F+SI++
Sbjct: 54 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIEN 111
Query: 78 PNHFMWNTLIRAQASSLN-PDKAIFLYMNMRRTG-FAPNQHTFTFVLKACSNVRSLNCCK 135
+ FMWNTLIRA A ++ ++A LY M G +P++HTF FVLKAC+ + + K
Sbjct: 112 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 171
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
Q+H + K G D++V N L+ Y L+ AR+VFDE+ R+L W +MI +
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR---GFEMGAI 252
+ AL LF +M FEP+ T+ SVLSACA G L LG H F+ + M +
Sbjct: 232 EYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 290
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EK 310
+ +L+ MY K G+L A+ +F M +R++A+WNAMI G A+HG AEEA++ F ++ ++
Sbjct: 291 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 350
Query: 311 EQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVL 370
E + PN +TFVG+L AC H GF++ GRQ F M R Y IEP +EHYGC+VDL+ R G +
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 410
Query: 371 EAEELIKRMVWKPDVVMWGALL-AACKNHGNIEVAERVVKEIIALEPNNH-------GVY 422
EA +++ M KPD V+W +LL A CK ++E++E + + II + +N G Y
Sbjct: 411 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 470
Query: 423 VVLSNMYAEA 432
V+LS +YA A
Sbjct: 471 VLLSRVYASA 480
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/453 (38%), Positives = 260/453 (57%), Gaps = 37/453 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-----LSYATR 70
P L+LL C S LK IH ++ + I D F ASRLLA C S+ + L YA
Sbjct: 14 PKLALL-QSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
+F+ IQ+PN F++N LIR ++ P KA Y M ++ P+ TF F++KA S +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYS----------------------------- 161
+ +Q H+ + + G D++V N LV Y+
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 162 --VSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTL 219
+ NAR++FDE+ +R L W+ MI+GYA++ +A+ LF+ M EG N +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 220 ASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPE 279
SV+S+CA G LE GE+ + +V + ILGTALV M+ + G + KA +F+ +PE
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 280 RNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
+ +W+++I GLA HGHA +A+ F ++ +P D+TF VLSAC H G ++ G +I
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 340 FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
+ +MK+ +GIEP++EHYGC+VD+LGR GK+ EAE I +M KP+ + GALL ACK +
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 400 NIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
N EVAERV +I ++P + G YV+LSN+YA A
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACA 465
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 313 bits (803), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/462 (38%), Positives = 261/462 (56%), Gaps = 41/462 (8%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSP 78
S+L +CKSM +L +IH +I ++ S+ L+F ALSSSGD+ YA + + + P
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
++ WN +IR ++S NP+K+I +Y+ M R G P+ T+ F++K+ S + + +H
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 139 THVSKSGLDLDLHVVNCLVR-------------------------------CYSVSSDLN 167
V KSGL+ DL + N L+ Y+ S D+
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSAC 226
+AR VFDE+ R + W++MI GY + N+AL +FDQM+ M + N VT+ SV+ AC
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALF--DSMPERNIAT 284
A G L G+ VH ++ + IL T+L+ MY K G++ A ++F S+ E +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNA+I GLASHG E+L LF K+ + +I P++ITF+ +L+AC H G + F S+K
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
G EPK EHY CMVD+L R G V +A + I M KP M GALL C NHGN+E+A
Sbjct: 372 ES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA------EAESMKMQLE 440
E V K++I L+P+N G YV L+N+YA A SM+ +E
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAME 472
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 313 bits (801), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/525 (33%), Positives = 288/525 (54%), Gaps = 49/525 (9%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMW 83
+ KS ++ K+I+A +II Q F ++++ FC D+ YATRLFN + +PN F++
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLY 76
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
N++IRA + I +Y + R F P++ TF F+ K+C+++ S KQ+H H+
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR----------------------- 179
K G + N L+ Y DL +A +VFDE+ R
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 180 --------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
T+ WT MISGY EA+ F +M + G EP+ ++L SVL +CAQ G
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 232 LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISG 291
LELG+ +H++ + RGF + AL+ MY+K G +++A LF M +++ +W+ MISG
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 292 LASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEP 351
A HG+A A++ F ++++ ++ PN ITF+G+LSAC H G G + F M++ Y IEP
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 352 KIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
KIEHYGC++D+L R GK+ A E+ K M KPD +WG+LL++C+ GN++VA + +
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL 436
Query: 412 IALEPNNHGVYVVLSNMYAEAESMKMQLEILLVQVLFAGLASAADILQNPDF-ESPPTNL 470
+ LEP + G YV+L+N+YA+ + ++ +++N + ++P +L
Sbjct: 437 VELEPEDMGNYVLLANIYADLGK-------------WEDVSRLRKMIRNENMKKTPGGSL 483
Query: 471 TPNRSTPFVLLNGNNTIPGWT-FEGTVQYVTASQTIRLPDNGHAI 514
+ ++G+N+ P WT +Q T+ Q + N +A+
Sbjct: 484 IEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQDQDVITNNNAL 528
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 181/481 (37%), Positives = 257/481 (53%), Gaps = 65/481 (13%)
Query: 14 PIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS-GDLSYATRLF 72
P+P LS ++ KS+ +++Q HA M+ + D F+AS+L+AF A + +SYA +
Sbjct: 39 PVPILSF-TERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 97
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
N I SPN F N++IRA A+S P+ A+ ++ M P++++FTFVLKAC+
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQV-------------------- 172
+QIH KSGL D+ V N LV Y S AR+V
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 173 -----------FDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM-------------- 207
FDE+ R + W MISGYA + EA +FD M
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 208 ---------LMEGF---------EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
++E F +P+ TL SVLSACA G L GE VHV++ G E+
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
L TALV MY+K G + KA +F + +R+++TWN++IS L+ HG ++AL++F ++
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E PN ITF+GVLSAC H G +D R++F M VY +EP IEHYGCMVDLLGR GK+
Sbjct: 398 YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKI 457
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EAEEL+ + ++ +LL ACK G +E AER+ ++ L + Y +SN+Y
Sbjct: 458 EEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLY 517
Query: 430 A 430
A
Sbjct: 518 A 518
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 309 bits (792), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/412 (40%), Positives = 255/412 (61%), Gaps = 5/412 (1%)
Query: 27 SMHQLKQIHAQMIISS-RIQDHFAASRLLAF-CALSSSGDLSYATRLFNSIQSP-NHFMW 83
S+ +L+QIHA I I D L+ + +L S +SYA ++F+ I+ P N F+W
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIW 88
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
NTLIR A N A LY MR +G P+ HT+ F++KA + + + + IH+ V
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 143 KSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALM 202
+SG ++V N L+ Y+ D+ +A +VFD++ + L W ++I+G+A++ + EAL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 203 LFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYT 262
L+ +M +G +P+ T+ S+LSACA+ G L LG++VHV++ G L+ +Y
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 263 KNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFV 321
+ G + +AK LFD M ++N +W ++I GLA +G +EA++LF+ +E E ++P +ITFV
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
G+L AC H G + G + F M+ Y IEP+IEH+GCMVDLL R G+V +A E IK M
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+P+VV+W LL AC HG+ ++AE +I+ LEPN+ G YV+LSNMYA +
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 440
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 305 bits (781), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 251/413 (60%), Gaps = 2/413 (0%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNSIQSP 78
LL KC S+ +L QI A I S I+D ++L+ FC S + +SYA LF ++ P
Sbjct: 34 LLISKCNSLRELMQIQA-YAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
+ ++N++ R + NP + L++ + G P+ +TF +LKAC+ ++L +Q+H
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
K GLD +++V L+ Y+ D+++AR VFD I + + MI+GYA+ R N
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
EAL LF +M + +PN +TL SVLS+CA G L+LG+ +H + K F + TAL+
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 272
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
M+ K G+L A ++F+ M ++ W+AMI A+HG AE+++ +F ++ E + P++I
Sbjct: 273 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
TF+G+L+AC H G ++ GR+ F M +GI P I+HYG MVDLL R G + +A E I +
Sbjct: 333 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 392
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+ P ++W LLAAC +H N+++AE+V + I L+ ++ G YV+LSN+YA
Sbjct: 393 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYAR 445
>sp|Q9FLS9|PP441_ARATH Pentatricopeptide repeat-containing protein At5g61800
OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1
Length = 499
Score = 305 bits (781), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/466 (36%), Positives = 255/466 (54%), Gaps = 54/466 (11%)
Query: 19 SLLADKCKSMHQLKQIHAQMIISSRIQDHFA-----ASRLLAFCALSSSGD-----LSYA 68
S L C+++ L Q HAQ I S RI + F A+ L A ++S S +SYA
Sbjct: 8 SYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYA 67
Query: 69 TRLFNSIQSPNHFMWNTLIRA----QASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
T +F I +P+ F +NT+IR + SSL+ + ++ MRR P+ HTF FV KA
Sbjct: 68 TSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKR---FFVEMRRRSVPPDFHTFPFVFKA 124
Query: 125 CSNVRS--LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR--- 179
C+ ++ L K +H + GL DL +N L+R YS+ + +++A Q+FDE R
Sbjct: 125 CAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVV 184
Query: 180 TLNV----------------------------WTTMISGYAQSFRANEALMLFDQMLMEG 211
T NV W ++ISGYAQ EA+ LFD+M+ G
Sbjct: 185 TYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALG 244
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P++V + S LSACAQSG + G+ +H + K + + + L T LV Y K G + A
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAM 304
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+F+ ++ + TWNAMI+GLA HG+ E +D FRK+ I P+ +TF+ VL C H+G
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW----KPDVVM 387
+D R +F M+ +Y + +++HYGCM DLLGR G + EA E+I++M + ++
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
W LL C+ HGNIE+AE+ + AL P + GVY V+ MYA AE
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAE 470
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 301 bits (772), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 259/453 (57%), Gaps = 39/453 (8%)
Query: 13 LPIP-PLSLLADKCKSMHQLKQIHAQMIISSRI-QDHFAASRLLAFCALSSSGDLSYATR 70
LP P L++L DK +S+ ++ QIHA ++ + + + L A +S G + ++
Sbjct: 26 LPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLA 85
Query: 71 LFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRS 130
LF+ P+ F++ I + + D+A LY+ + + PN+ TF+ +LK+CS
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST--- 142
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTL--------- 181
K IHTHV K GL +D +V LV Y+ D+ +A++VFD + R+L
Sbjct: 143 -KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 182 -----NV-----------------WTTMISGYAQSFRANEALMLFDQMLMEGF-EPNSVT 218
NV W MI GYAQ N+ALMLF ++L EG +P+ +T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 219 LASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP 278
+ + LSAC+Q G LE G +HVFVK + + T L+ MY+K G+L +A +F+ P
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 279 ERNIATWNAMISGLASHGHAEEALDLFRKLEK-EQIVPNDITFVGVLSACCHAGFIDVGR 337
++I WNAMI+G A HG++++AL LF +++ + P DITF+G L AC HAG ++ G
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 338 QIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKN 397
+IF SM + YGI+PKIEHYGC+V LLGR G++ A E IK M D V+W ++L +CK
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 398 HGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
HG+ + + + + +I L N G+YV+LSN+YA
Sbjct: 442 HGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYA 474
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 299 bits (765), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 247/448 (55%), Gaps = 37/448 (8%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK++ + IHA++I + QD F L+ C+ S D YA +F+ + +PN +++
Sbjct: 39 CKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD--YAYDVFSYVSNPNVYLYT 96
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
+I SS + LY M P+ + T VLKAC L C++IH V K
Sbjct: 97 AMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKL 152
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR-------TLN--------------- 182
G V ++ Y S +L NA+++FDE+ +R +N
Sbjct: 153 GFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELF 212
Query: 183 ---------VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLE 233
WT MI G ++ N+AL LF +M ME N T VLSAC+ G LE
Sbjct: 213 QDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALE 272
Query: 234 LGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLA 293
LG VH FV+ + E+ +G AL++MY++ G + +A+ +F M ++++ ++N MISGLA
Sbjct: 273 LGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA 332
Query: 294 SHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
HG + EA++ FR + PN +T V +L+AC H G +D+G ++F SMKRV+ +EP+I
Sbjct: 333 MHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQI 392
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGC+VDLLGR G++ EA I+ + +PD +M G LL+ACK HGN+E+ E++ K +
Sbjct: 393 EHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFE 452
Query: 414 LEPNNHGVYVVLSNMYAEAESMKMQLEI 441
E + G YV+LSN+YA + K EI
Sbjct: 453 SENPDSGTYVLLSNLYASSGKWKESTEI 480
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 48/320 (15%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFD 174
+ T VL++C N+ + IH + ++ D D VV L+R S ++ A VF
Sbjct: 29 RKTLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 85
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
+ N + ++T MI G+ S R+ + + L+ +M+ P++ + SVL AC C E
Sbjct: 86 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCRE- 144
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-------------- 280
+H V GF +G ++ +Y K+G L AK +FD MP+R
Sbjct: 145 ---IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSE 201
Query: 281 -----------------NIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
+ W AMI GL + +AL+LFR+++ E + N+ T V V
Sbjct: 202 CGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCV 261
Query: 324 LSACCHAGFIDVGRQI--FGSMKRVYGIEPKIEHY--GCMVDLLGRCGKVLEAEELIKRM 379
LSAC G +++GR + F +R+ ++ ++ ++++ RCG + EA + R+
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRM-----ELSNFVGNALINMYSRCGDINEARRVF-RV 315
Query: 380 VWKPDVVMWGALLAACKNHG 399
+ DV+ + +++ HG
Sbjct: 316 MRDKDVISYNTMISGLAMHG 335
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 159/336 (47%), Gaps = 39/336 (11%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+DH AA+ ++ S G + A LF ++ + W +I + +KA+ L+
Sbjct: 187 RDHVAATVMIN--CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFR 244
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M+ + N+ T VL ACS++ +L + +H+ V ++L V N L+ YS
Sbjct: 245 EMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCG 304
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
D+N AR+VF +R++ + + TMISG A + EA+ F M+ GF PN VTL ++L+
Sbjct: 305 DINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLN 364
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC+ G L++G + VF M K +F+ P+ I
Sbjct: 365 ACSHGGLLDIG--LEVFNSM--------------------------KRVFNVEPQ--IEH 394
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
+ ++ L G EEA +R +E I P+ I +LSAC G +++G +I K
Sbjct: 395 YGCIVDLLGRVGRLEEA---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI---AK 448
Query: 345 RVYGIE-PKIEHYGCMVDLLGRCGKVLEAEELIKRM 379
R++ E P Y + +L GK E+ E+ + M
Sbjct: 449 RLFESENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 247/421 (58%), Gaps = 4/421 (0%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
PPL K + + Q HA ++ D F + L++ SSSG +A+RLF+
Sbjct: 107 FPPLLKAVFKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLIS--GYSSSGLFDFASRLFDG 163
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+ + W +I + + +A+ ++ M++TG A N+ T VLKA V +
Sbjct: 164 AEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 135 KQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+ +H ++G + D+ + + LV Y S ++A++VFDE+ +R + WT +I+GY Q
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 194 SFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAIL 253
S ++ +++F++ML PN TL+SVLSACA G L G +VH ++ E+
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA 343
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
GT L+ +Y K G L +A +F+ + E+N+ TW AMI+G A+HG+A +A DLF + +
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV 403
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN++TF+ VLSAC H G ++ GR++F SMK + +EPK +HY CMVDL GR G + EA+
Sbjct: 404 SPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAK 463
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
LI+RM +P V+WGAL +C H + E+ + +I L+P++ G Y +L+N+Y+E++
Sbjct: 464 ALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQ 523
Query: 434 S 434
+
Sbjct: 524 N 524
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 207/405 (51%), Gaps = 13/405 (3%)
Query: 30 QLKQIHAQMIISSRI---QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTL 86
LKQIH ++ S +D F SRLL C +++ YA RL +Q+ + +W++L
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFL-SRLLRRCCTAAT-QFRYARRLLCQLQTLSIQLWDSL 73
Query: 87 IR--AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKS 144
I + +LN + Y +MRR G P++HTF +LKA +R N Q H H+ K
Sbjct: 74 IGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF-QFHAHIVKF 132
Query: 145 GLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLF 204
GLD D V N L+ YS S + A ++FD ++ + WT MI G+ ++ A+EA++ F
Sbjct: 133 GLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 205 DQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VFVKMRGFEMGAILGTALVHMYTK 263
+M G N +T+ SVL A + + G VH ++++ + +G++LV MY K
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
A+ +FD MP RN+ TW A+I+G ++ + +F ++ K + PN+ T V
Sbjct: 253 CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
LSAC H G + GR++ M + IE ++DL +CG + EA + +R+ K
Sbjct: 313 LSACAHVGALHRGRRVHCYMIK-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK- 370
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIA--LEPNNHGVYVVLS 426
+V W A++ HG A + +++ + PN VLS
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLS 415
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 295 bits (756), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 231/375 (61%), Gaps = 2/375 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+S G + A +LF+ I + WN +I A + N +A+ L+ +M +T P++ T
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
V+ AC+ S+ +Q+H + G +L +VN L+ YS +L A +F+ + +
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
+ W T+I GY EAL+LF +ML G PN VT+ S+L ACA G +++G +H
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 240 VFV--KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
V++ +++G + L T+L+ MY K G + A +F+S+ +++++WNAMI G A HG
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
A+ + DLF ++ K I P+DITFVG+LSAC H+G +D+GR IF +M + Y + PK+EHYG
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CM+DLLG G EAEE+I M +PD V+W +LL ACK HGN+E+ E + +I +EP
Sbjct: 511 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 570
Query: 418 NHGVYVVLSNMYAEA 432
N G YV+LSN+YA A
Sbjct: 571 NPGSYVLLSNIYASA 585
Score = 256 bits (655), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 234/438 (53%), Gaps = 37/438 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGD-LSYATRLFNS 74
P LSLL + CK++ L+ IHAQMI ++A S+L+ FC LS + L YA +F +
Sbjct: 35 PSLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
IQ PN +WNT+ R A S +P A+ LY+ M G PN +TF FVLK+C+ ++
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 135 KQIHTHVSKSGLDLDLHV-------------------------------VNCLVRCYSVS 163
+QIH HV K G DLDL+V L++ Y+
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 164 SDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVL 223
+ NA+++FDEI + + W MISGYA++ EAL LF M+ P+ T+ +V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
SACAQSG +ELG +VH+++ GF + AL+ +Y+K G L A LF+ +P +++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+WN +I G +EAL LF+++ + PND+T + +L AC H G ID+GR I +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 344 -KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
KR+ G+ ++D+ +CG + A ++ ++ K + W A++ HG +
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWNAMIFGFAMHGRAD 452
Query: 403 VAERVVKEI--IALEPNN 418
+ + + I ++P++
Sbjct: 453 ASFDLFSRMRKIGIQPDD 470
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 293 bits (749), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 247/407 (60%), Gaps = 8/407 (1%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
++H ++ + QD F A++L+ S G + YA ++F+ + ++WN L RA
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC----SNVRSLNCCKQIHTHVSKSGLDL 148
+ + ++ + LY M R G ++ T+T+VLKAC V L K+IH H+++ G
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML 208
++++ LV Y+ ++ A VF + R + W+ MI+ YA++ +A EAL F +M+
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 209 MEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGA 266
E + PNSVT+ SVL ACA LE G+ +H ++ RG + + +ALV MY + G
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 267 LAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSA 326
L + +FD M +R++ +WN++IS HG+ ++A+ +F ++ P +TFV VL A
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 327 CCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
C H G ++ G+++F +M R +GI+P+IEHY CMVDLLGR ++ EA ++++ M +P
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+WG+LL +C+ HGN+E+AER + + ALEP N G YV+L+++YAEA+
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQ 502
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 8/308 (2%)
Query: 112 APNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
+P+Q T+ ++ C + SL+ ++H H+ +G D D + L+ YS ++ AR+
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGC 231
VFD+ R RT+ VW + + E L L+ +M G E + T VL AC S C
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 232 ----LELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNA 287
L G+++H + RG+ + T LV MY + G + A +F MP RN+ +W+A
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 288 MISGLASHGHAEEALDLFRKLEKE--QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
MI+ A +G A EAL FR++ +E PN +T V VL AC ++ G+ I G + R
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
G++ + +V + GRCGK+ + + RM DVV W +L+++ HG + A
Sbjct: 314 -RGLDSILPVISALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 406 RVVKEIIA 413
++ +E++A
Sbjct: 372 QIFEEMLA 379
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 6/211 (2%)
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
++L + P+ T ++ C L +VH + G + L T L+ MY+ G
Sbjct: 67 RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLG 126
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLS 325
++ A+ +FD +R I WNA+ L GH EE L L+ K+ + + + T+ VL
Sbjct: 127 SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 326 AC----CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
AC C + G++I + R G + +VD+ R G V A + M
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTR-RGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEII 412
+ +VV W A++A +G A R +E++
Sbjct: 246 R-NVVSWSAMIACYAKNGKAFEALRTFREMM 275
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 290 bits (743), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 252/446 (56%), Gaps = 34/446 (7%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
L L+ +C +M +LKQIHA +I + I D ASR+LAFC S S D++YA +F I
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINH 86
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNM--RRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
N F+WNT+IR + S P+ AI ++++M P + T+ V KA + +
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 136 QIHTHVSKSGLDLDLHVVN----------CLVRCYSV---------------------SS 164
Q+H V K GL+ D + N CL+ + +
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
++ A+ +FDE+ R W +MISG+ ++ R +AL +F +M + +P+ T+ S+L+
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
ACA G E G +H ++ FE+ +I+ TAL+ MY K G + + +F+ P++ ++
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WN+MI GLA++G E A+DLF +LE+ + P+ ++F+GVL+AC H+G + + F MK
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
Y IEP I+HY MV++LG G + EAE LIK M + D V+W +LL+AC+ GN+E+A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYA 430
+R K + L+P+ YV+LSN YA
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYA 472
>sp|Q9FG85|PP415_ARATH Pentatricopeptide repeat-containing protein At5g43790
OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1
Length = 460
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 247/422 (58%), Gaps = 18/422 (4%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L KCKS+ LKQIHAQ+I + S+LL LSS+ LSYA + I +P+
Sbjct: 15 LISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLH---LSSTVCLSYALSILRQIPNPSV 71
Query: 81 FMWNTLIRAQASSLNPDK---AIFLY---MNMRRTGFAPNQHTFTFVLKACS-NVRSLNC 133
F++NTLI + S+ N + A LY ++ R PN+ T+ + KA + +
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 134 CKQIHTHVSK--SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ +H HV K ++ D V LV Y+ L AR +F+ IR L W T+++ Y
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 192 AQSFRAN---EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
A S + E L+LF +M + PN ++L +++ +CA G G HV+V
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+ +GT+L+ +Y+K G L+ A+ +FD M +R+++ +NAMI GLA HG +E ++L++ L
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGK 368
+ +VP+ TFV +SAC H+G +D G QIF SMK VYGIEPK+EHYGC+VDLLGR G+
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNM 428
+ EAEE IK+M KP+ +W + L + + HG+ E E +K ++ LE N G YV+LSN+
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 429 YA 430
YA
Sbjct: 429 YA 430
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 249/458 (54%), Gaps = 36/458 (7%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYA 68
Q L + L D C +++Q+KQIH ++ Q + ++L+ L D YA
Sbjct: 44 QKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYA 102
Query: 69 TRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R+ +Q N F+W +IR A D+AI +Y MR+ P TF+ +LKAC +
Sbjct: 103 RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR--------- 179
+ LN +Q H + ++V N ++ Y ++ AR+VFDE+ R
Sbjct: 163 KDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELI 222
Query: 180 ----------------------TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSV 217
+ WT M++G+AQ+ + EAL FD+M G + V
Sbjct: 223 AAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEV 282
Query: 218 TLASVLSACAQSGCLELGEKVHVFVKMRGFEMG--AILGTALVHMYTKNGALAKAKALFD 275
T+A +SACAQ G + ++ + G+ ++G+AL+ MY+K G + +A +F
Sbjct: 283 TVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFM 342
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFID 334
SM +N+ T+++MI GLA+HG A+EAL LF + + +I PN +TFVG L AC H+G +D
Sbjct: 343 SMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD 402
Query: 335 VGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAA 394
GRQ+F SM + +G++P +HY CMVDLLGR G++ EA ELIK M +P +WGALL A
Sbjct: 403 QGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA 462
Query: 395 CKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
C+ H N E+AE + + LEP+ G Y++LSN+YA A
Sbjct: 463 CRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASA 500
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 286 bits (732), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 237/405 (58%), Gaps = 3/405 (0%)
Query: 34 IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASS 93
IH + + +D + A L+ A G + A ++F+ I N +W L++
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYA--QLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 94 LNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH-THVSKSGLDLDLHV 152
+ L+ MR TG A + T ++KAC NV + K +H + +S +D ++
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF 212
++ Y L+NAR++F+ +R + +WTT+ISG+A+ RA EA LF QML E
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 213 EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKA 272
PN TLA++L +C+ G L G+ VH ++ G EM A+ T+ + MY + G + A+
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 273 LFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGF 332
+FD MPERN+ +W++MI+ +G EEALD F K++ + +VPN +TFV +LSAC H+G
Sbjct: 369 VFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428
Query: 333 IDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
+ G + F SM R YG+ P+ EHY CMVDLLGR G++ EA+ I M KP WGALL
Sbjct: 429 VKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Query: 393 AACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKM 437
+AC+ H +++A + ++++++EP VYV+LSN+YA+A +M
Sbjct: 489 SACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEM 533
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 184/384 (47%), Gaps = 9/384 (2%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ--SPNHFMW 83
K+++ +Q+HA++II + S L A S L +AT FN I N W
Sbjct: 18 KTLNHTQQVHAKVIIHGFEDEVVLGSSLTN--AYIQSNRLDFATSSFNRIPCWKRNRHSW 75
Query: 84 NTLIRAQASSLNP--DKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
NT++ + S + LY MRR + F +KAC + L IH
Sbjct: 76 NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLA 135
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K+GLD D +V LV Y+ + +A++VFDEI R +W ++ GY + + E
Sbjct: 136 MKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVF 195
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMGAILGTALVHM 260
LF M G +++TL ++ AC ++G+ VH R F + L +++ M
Sbjct: 196 RLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM 255
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K L A+ LF++ +RN+ W +ISG A A EA DLFR++ +E I+PN T
Sbjct: 256 YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTL 315
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
+L +C G + G+ + G M R GIE ++ +D+ RCG + A + M+
Sbjct: 316 AAILVSCSSLGSLRHGKSVHGYMIR-NGIEMDAVNFTSFIDMYARCGNIQMARTVFD-MM 373
Query: 381 WKPDVVMWGALLAACKNHGNIEVA 404
+ +V+ W +++ A +G E A
Sbjct: 374 PERNVISWSSMINAFGINGLFEEA 397
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 221 SVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-- 278
++L+ +Q+ L ++VH V + GFE +LG++L + Y ++ L A + F+ +P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 279 ERNIATWNAMISGLASHGHA--EEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVG 336
+RN +WN ++SG + + L L+ ++ + + V + AC G ++ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 337 RQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALL 392
I G +MK G++ +V++ + G + A+++ + + + V+WG L+
Sbjct: 129 ILIHGLAMKN--GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLM 182
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 286 bits (732), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/453 (35%), Positives = 248/453 (54%), Gaps = 40/453 (8%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+S + K + ++ LKQ+ + MI+S HF +LL FC L +LSYA +F+
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLC-NLSYARFIFDRFSF 85
Query: 78 PNHFMWNTLIRAQASSL--NPDKAI-FLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
PN ++ ++ A +SSL + A F + + R+ PN + VLK+ + S
Sbjct: 86 PNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFST 145
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVS-SDLNNARQVFDEIRNRTLNVWTTMISGYAQ 193
+HTH+ KSG L + V L+ Y+ S S + ARQ+FDE+ R + WT M+SGYA+
Sbjct: 146 PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYAR 205
Query: 194 SFRANEALMLFDQM--------------------LMEG------------FEPNSVTLAS 221
S + A+ LF+ M +E PN VT+
Sbjct: 206 SGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVC 265
Query: 222 VLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERN 281
VLSACAQ+G L+L + +H F R + +LV +Y K G L +A ++F +++
Sbjct: 266 VLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKS 325
Query: 282 IATWNAMISGLASHGHAEEALDLFRKLEK---EQIVPNDITFVGVLSACCHAGFIDVGRQ 338
+ WN+MI+ A HG +EEA+ +F ++ K I P+ ITF+G+L+AC H G + GR
Sbjct: 326 LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG 385
Query: 339 IFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNH 398
F M +GIEP+IEHYGC++DLLGR G+ EA E++ M K D +WG+LL ACK H
Sbjct: 386 YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIH 445
Query: 399 GNIEVAERVVKEIIALEPNNHGVYVVLSNMYAE 431
G++++AE VK ++AL PNN G +++N+Y E
Sbjct: 446 GHLDLAEVAVKNLVALNPNNGGYVAMMANLYGE 478
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 155/361 (42%), Gaps = 48/361 (13%)
Query: 104 MNMRRTGF----APNQHTFT-----FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVN 154
M R T F AP+ H F+ S R LN KQ+ + + SGL +
Sbjct: 1 MGTRVTQFSYLHAPSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCF 60
Query: 155 CLVR-CYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS--FRANEALMLFDQMLMEG 211
L+R C +L+ AR +FD +++ +++ Y+ S A+ A F M+
Sbjct: 61 KLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRS 120
Query: 212 F-EPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM---------- 260
PN VL + VH + GF + ++ TAL+H
Sbjct: 121 VPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITL 180
Query: 261 ----------------------YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHA 298
Y ++G ++ A ALF+ MPER++ +WNA+++ +G
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 299 EEALDLFRKLEKE-QIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
EA+ LFR++ E I PN++T V VLSAC G + + + I R + +
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYR-RDLSSDVFVSN 299
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
+VDL G+CG + EA + K M K + W +++ HG E A V +E++ L N
Sbjct: 300 SLVDLYGKCGNLEEASSVFK-MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIN 358
Query: 418 N 418
+
Sbjct: 359 D 359
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 286 bits (731), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/449 (33%), Positives = 249/449 (55%), Gaps = 34/449 (7%)
Query: 15 IPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNS 74
P L A + S+ + +H + S+ D F A+ L+ C S GDL A ++F +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI-HCYFSC-GDLDSACKVFTT 191
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I+ + WN++I +PDKA+ L+ M + T VL AC+ +R+L
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA-- 192
+Q+ +++ ++ ++++L + N ++ Y+ + +A+++FD + + WTTM+ GYA
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 193 -----------------------------QSFRANEALMLFDQM-LMEGFEPNSVTLASV 222
Q+ + NEAL++F ++ L + + N +TL S
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSACAQ G LELG +H ++K G M + +AL+HMY+K G L K++ +F+S+ +R++
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
W+AMI GLA HG EA+D+F K+++ + PN +TF V AC H G +D +F
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+ YGI P+ +HY C+VD+LGR G + +A + I+ M P +WGALL ACK H N+
Sbjct: 492 MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLN 551
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAE 431
+AE ++ LEP N G +V+LSN+YA+
Sbjct: 552 LAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 221/412 (53%), Gaps = 35/412 (8%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L ++C S+ QLKQ H MI + D ++AS+L A ALSS L YA ++F+ I PN
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F WNTLIRA AS +P +I+ +++M + PN++TF F++KA + V SL+ + +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 140 HVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANE 199
KS + D+ V N L+ CY DL++A +VF I+ + + W +MI+G+ Q ++
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 200 ALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVH 259
AL LF +M E + + VT+ VLSACA+ LE G +V +++ + L A++
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 260 MYTKNGALAKAKALFD-------------------------------SMPERNIATWNAM 288
MYTK G++ AK LFD SMP+++I WNA+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 289 ISGLASHGHAEEALDLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVY 347
IS +G EAL +F +L+ ++ + N IT V LSAC G +++GR I +K+ +
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-H 394
Query: 348 GIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG 399
GI ++ + +CG + ++ E+ V K DV +W A++ HG
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNS-VEKRDVFVWSAMIGGLAMHG 445
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 285 bits (729), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 228/405 (56%), Gaps = 31/405 (7%)
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTF 118
+S GD+ A ++F+ + WN LI +KAI++Y M G P+ T
Sbjct: 201 FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 119 TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRN 178
++ +CS + LN K+ + +V ++GL + + +VN L+ +S D++ AR++FD +
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 179 RTLNVWTTMISGYA-------------------------------QSFRANEALMLFDQM 207
RT+ WTTMISGYA Q+ R +AL LF +M
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
+P+ +T+ LSAC+Q G L++G +H +++ + LGT+LV MY K G +
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
++A ++F + RN T+ A+I GLA HG A A+ F ++ I P++ITF+G+LSAC
Sbjct: 441 SEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
Query: 328 CHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVM 387
CH G I GR F MK + + P+++HY MVDLLGR G + EA+ L++ M + D +
Sbjct: 501 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 560
Query: 388 WGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
WGALL C+ HGN+E+ E+ K+++ L+P++ G+YV+L MY EA
Sbjct: 561 WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEA 605
Score = 229 bits (585), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 224/431 (51%), Gaps = 37/431 (8%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P LSLL +KCK + LKQI AQMII+ I D FA+SRL+AFCALS S L Y+ ++ I
Sbjct: 55 PLLSLL-EKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGI 113
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA---PNQHTFTFVLKACSNVRSLN 132
++PN F WN IR + S NP ++ LY M R G P+ T+ + K C+++R +
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
I HV K L+L HV N + ++ D+ NAR+VFDE R L W +I+GY
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ A +A+ ++ M EG +P+ VT+ ++S+C+ G L G++ + +VK G M
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG---------------- 296
L AL+ M++K G + +A+ +FD++ +R I +W MISG A G
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 297 ---------------HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFG 341
++AL LF++++ P++IT + LSAC G +DVG I
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 342 SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNI 401
+++ Y + + +VD+ +CG + EA + + + + + A++ HG+
Sbjct: 414 YIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHG-IQTRNSLTYTAIIGGLALHGDA 471
Query: 402 EVAERVVKEII 412
A E+I
Sbjct: 472 STAISYFNEMI 482
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 21/306 (6%)
Query: 13 LPIPPLSLLAD---KCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSS----GDL 65
+ IP ++ L D KC +H+ + RI D+ ++++ + S G L
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEAR----------RIFDNLEKRTIVSWTTMISGYARCGLL 339
Query: 66 SYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKAC 125
+ +LF+ ++ + +WN +I + A+ L+ M+ + P++ T L AC
Sbjct: 340 DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 126 SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWT 185
S + +L+ IH ++ K L L++ + LV Y+ +++ A VF I+ R +T
Sbjct: 400 SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYT 459
Query: 186 TMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMR 245
+I G A A+ A+ F++M+ G P+ +T +LSAC G ++ G +K R
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Query: 246 GFEMGAILG--TALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEAL 302
F + L + +V + + G L +A L +SMP E + A W A++ G HG+ E
Sbjct: 520 -FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 578
Query: 303 DLFRKL 308
+KL
Sbjct: 579 KAAKKL 584
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/440 (36%), Positives = 241/440 (54%), Gaps = 39/440 (8%)
Query: 28 MHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLI 87
M+ +KQ+HA + + + RLL +L YA +LF+ Q+ F++N LI
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLI------PNLVYARKLFDHHQNSCTFLYNKLI 54
Query: 88 RAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
+A P ++I LY + G P+ HTF F+ A ++ S + +H+ +SG +
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
D L+ Y+ L AR+VFDE+ R + VW MI+GY + A+ LFD M
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 208 ----------LMEGF----------------------EPNSVTLASVLSACAQSGCLELG 235
++ GF +PN +T+ SVL ACA G LE+G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 236 EKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLAS 294
++ + + GF + A + MY+K G + AK LF+ + +RN+ +WN+MI LA+
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 295 HGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIE 354
HG +EAL LF ++ +E P+ +TFVG+L AC H G + G+++F SM+ V+ I PK+E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 355 HYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIAL 414
HYGCM+DLLGR GK+ EA +LIK M KPD V+WG LL AC HGN+E+AE + + L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 415 EPNNHGVYVVLSNMYAEAES 434
EP N G V++SN+YA E
Sbjct: 415 EPTNPGNCVIMSNIYAANEK 434
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 246/450 (54%), Gaps = 34/450 (7%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P ++LL D + +++QIHA++ + ++D + ALS L YA ++ +
Sbjct: 8 PAIALL-DSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRS 66
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHTFTFVLKACSNVRSLNC 133
+ P F N++IRA S P+K+ Y + +G P+ +T F+++AC+ +R
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 134 CKQIHTHVSKSGLDLDLHV----------VNCLVRCYSV--------------------- 162
Q+H + G D D HV + CL C+ V
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 163 SSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASV 222
D+ AR++F+ + R W MISGYAQ + EAL +F M +EG + N V + SV
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 223 LSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
LSAC Q G L+ G H +++ ++ L T LV +Y K G + KA +F M E+N+
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 283 ATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGS 342
TW++ ++GLA +G E+ L+LF ++++ + PN +TFV VL C GF+D G++ F S
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDS 366
Query: 343 MKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
M+ +GIEP++EHYGC+VDL R G++ +A +I++M KP +W +LL A + + N+E
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Query: 403 VAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ K+++ LE NHG YV+LSN+YA++
Sbjct: 427 LGVLASKKMLELETANHGAYVLLSNIYADS 456
>sp|Q9LJJ1|PP259_ARATH Putative pentatricopeptide repeat-containing protein At3g28640
OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1
Length = 504
Score = 280 bits (717), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 247/424 (58%), Gaps = 12/424 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSS-SGDLSYATRLFNSI 75
L L + +C ++ Q+K H+ II ++ +A S+LL AF L + + YA+ +F+SI
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 76 QSPNHFMWNTLIRAQASSLNPD---KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+ PN F+++T+IR + S P + L + AP+ TF F++ AC +
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 133 CCKQIHTHVSKSGLDL-DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
KQIH V K+G+ L D HV ++R Y L +AR+VFDEI + W +++GY
Sbjct: 134 VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF-EMG 250
+ +E L +F +ML++G EP+ ++ + L+ACAQ G L G+ +H FVK + + E
Sbjct: 194 VRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESD 253
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+GTALV MY K G + A +F + RN+ +W A+I G A++G+A++A+ +LE+
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLER 313
Query: 311 EQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E I P+ + +GVL+AC H GF++ GR + +M+ Y I PK EHY C+VDL+ R G++
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRL 373
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN----HGVYVVL 425
+A LI++M KP +WGALL C+ H N+E+ E VK ++ LE N V L
Sbjct: 374 DDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
Query: 426 SNMY 429
SN+Y
Sbjct: 434 SNIY 437
>sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protein At3g28660
OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1
Length = 504
Score = 280 bits (715), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 246/424 (58%), Gaps = 12/424 (2%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSS-SGDLSYATRLFNSI 75
L L + +C ++ Q+K H+ II ++ +A S+LL AF L + + YA+ +F+SI
Sbjct: 14 LILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 76 QSPNHFMWNTLIRAQASSLNPD---KAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+ PN F+++T+IR + S P + L + P+ TF F++ AC +
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 133 CCKQIHTHVSKSGLDL-DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
KQIH V K+G+ L D HV ++R Y L +AR+VFDEI + W +++GY
Sbjct: 134 VGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM-RGFEMG 250
+ +E L +F +ML+ G EP+ ++ + L+ACAQ G L G+ +H FVK R E
Sbjct: 194 VRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESD 253
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEK 310
+GTALV MY K G + A +F+ + RN+ +W A+I G A++G+A++A ++E+
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIER 313
Query: 311 EQ-IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
E I P+ + +GVL+AC H GF++ GR + +M+ YGI PK EHY C+VDL+ R G++
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRL 373
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN----HGVYVVL 425
+A +LI++M KP +WGALL C+ H N+E+ E V+ ++ LE N V L
Sbjct: 374 DDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
Query: 426 SNMY 429
SN+Y
Sbjct: 434 SNIY 437
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 247/446 (55%), Gaps = 17/446 (3%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAA-SRLLAFCALSSSGDLSYATRLFNSIQS-PNHFM 82
C SM +L++IH+ +II+ +Q H + + LL FCA+S +G LS+A LF+ S P+
Sbjct: 15 CNSMKKLRKIHSHVIING-LQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSD 73
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WN LIR ++S +P +I Y M + + P+ TF F LK+C ++S+ C +IH V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
+SG D V LVRCYS + + A +VFDE+ R L W MI ++ N+AL
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 202 MLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMY 261
++ +M EG +S TL ++LS+CA L +G +H E + AL+ MY
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 262 TKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFV 321
K G+L A +F+ M +R++ TWN+MI G HGH EA+ FRK+ + PN ITF+
Sbjct: 254 AKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFL 313
Query: 322 GVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVW 381
G+L C H G + G + F M + + P ++HYGCMVDL GR G++ + E+I
Sbjct: 314 GLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSC 373
Query: 382 KPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
D V+W LL +CK H N+E+ E +K+++ LE N G YV+++++Y+ A +
Sbjct: 374 HEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQ----- 428
Query: 442 LLVQVLFAGLASAADILQNPDFESPP 467
AS ++++ D ++ P
Sbjct: 429 --------AFASMRKLIRSHDLQTVP 446
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 156/309 (50%), Gaps = 23/309 (7%)
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVR--CYSVSSDLNNARQVFDEI-R 177
+L+ C++++ L ++IH+HV +GL + N L+R SV+ L++A+ +FD
Sbjct: 11 MLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGF-EPNSVTLASVLSACAQSGCLELGE 236
+ + + W +I G++ S +++ +++ML+ P+ T L +C + +
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHG 296
++H V GF AI+ T+LV Y+ NG++ A +FD MP R++ +WN MI + G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 297 HAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHY 356
+AL +++++ E + + T V +LS+C H +++G + + I I
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVML-------HRIACDIRCE 240
Query: 357 GC------MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKE 410
C ++D+ +CG + A + M K DV+ W +++ HG+ A ++
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRK 299
Query: 411 IIA--LEPN 417
++A + PN
Sbjct: 300 MVASGVRPN 308
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/373 (40%), Positives = 218/373 (58%), Gaps = 3/373 (0%)
Query: 63 GDLSYATRLFNSIQSPNHFM--WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTF 120
GDL A +F +I + + WN++ +A + A LY M R F P+ TF
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFIN 261
Query: 121 VLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRT 180
+ +C N +L + IH+H G D D+ +N + YS S D +AR +FD + +RT
Sbjct: 262 LAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRT 321
Query: 181 LNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHV 240
WT MISGYA+ +EAL LF M+ G +P+ VTL S++S C + G LE G+ +
Sbjct: 322 CVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA 381
Query: 241 FVKMRGFEM-GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ G + ++ AL+ MY+K G++ +A+ +FD+ PE+ + TW MI+G A +G
Sbjct: 382 RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFL 441
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
EAL LF K+ PN ITF+ VL AC H+G ++ G + F MK+VY I P ++HY CM
Sbjct: 442 EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCM 501
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR GK+ EA ELI+ M KPD +WGALL ACK H N+++AE+ + + LEP
Sbjct: 502 VDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMA 561
Query: 420 GVYVVLSNMYAEA 432
YV ++N+YA A
Sbjct: 562 APYVEMANIYAAA 574
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 187/401 (46%), Gaps = 45/401 (11%)
Query: 83 WNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVS 142
WN IR + +P +++ L+ M+R GF PN TF FV KAC+ + + CC+ +H H+
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 143 KSGLDLDLHV----VNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
KS D+ V V+ V+C SV + A +VF+ + R W M+SG+ QS +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSV----DYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
+A LF +M + P+SVT+ +++ + + L+L E +H G ++ + +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 259 HMYTKNGALAKAKALFDSMP--ERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPN 316
Y K G L AK +F+++ +R + +WN+M + G A +A L+ + +E+ P+
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 317 DITFVGVLSACCHAGFIDVGRQI------FGSMKRVYGIEPKIEHYG-----CMVDLL-- 363
TF+ + ++C + + GR I G+ + + I I Y C LL
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 364 -----------------GRCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEV 403
G + EA L M+ KPD+V +L++ C G++E
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 404 AERV--VKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEIL 442
+ + +I + +N + L +MY++ S+ +I
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 416
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 193/422 (45%), Gaps = 26/422 (6%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
+ +HA +I S D F + + +S D YA ++F + + WN ++
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVD--YAAKVFERMPERDATTWNAMLSGFC 129
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
S + DKA L+ MR P+ T ++++ S +SL + +H + G+D+ +
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIR--NRTLNVWTTMISGYAQSFRANEALMLFDQMLM 209
V N + Y DL++A+ VF+ I +RT+ W +M Y+ A +A L+ ML
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 210 EGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAK 269
E F+P+ T ++ ++C L G +H G + + MY+K+
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 270 AKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCH 329
A+ LFD M R +W MISG A G +EAL LF + K P+ +T + ++S C
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC-- 367
Query: 330 AGFIDVGRQIFGSMKRVYGIEPKIEHYGC----------MVDLLGRCGKVLEAEELIKRM 379
G+ FGS++ I+ + + YGC ++D+ +CG + EA ++
Sbjct: 368 ------GK--FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 380 VWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN-NHGVYVVLSNMYAEAESMKMQ 438
K VV W ++A +G A ++ ++I L+ NH ++ + A + S++
Sbjct: 420 PEKT-VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 439 LE 440
E
Sbjct: 479 WE 480
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
++N W I E+L+LF +M GFEPN+ T V ACA+ + E VH
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
+ F +GTA V M+ K ++ A +F+ MPER+ TWNAM+SG GH +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
+A LFR++ +I P+ +T + ++ + + + + R+ G++ ++
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL-GVDVQVTVANTW 194
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPD--VVMWGALLAA 394
+ G+CG L++ +L+ + + D VV W ++ A
Sbjct: 195 ISTYGKCGD-LDSAKLVFEAIDRGDRTVVSWNSMFKA 230
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 223/370 (60%), Gaps = 5/370 (1%)
Query: 65 LSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKA 124
L+ A +LF+ + N W T+I A + KA+ L + M R PN +T++ VL++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C+ + + + +H + K GL+ D+ V + L+ ++ + +A VFDE+ VW
Sbjct: 172 CNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKM 244
++I G+AQ+ R++ AL LF +M GF TL SVL AC LELG + HV +
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV- 287
Query: 245 RGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDL 304
++ IL ALV MY K G+L A +F+ M ER++ TW+ MISGLA +G+++EAL L
Sbjct: 288 -KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 305 FRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLG 364
F +++ PN IT VGVL AC HAG ++ G F SMK++YGI+P EHYGCM+DLLG
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVV 424
+ GK+ +A +L+ M +PD V W LL AC+ N+ +AE K++IAL+P + G Y +
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 425 LSNMYAEAES 434
LSN+YA ++
Sbjct: 467 LSNIYANSQK 476
Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 39/304 (12%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLL-AFCALSSSGDLSYATRLFNSIQSPNHFMW 83
C M ++ +H +I D F S L+ F L D A +F+ + + + +W
Sbjct: 172 CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED---ALSVFDEMVTGDAIVW 228
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
N++I A + D A+ L+ M+R GF Q T T VL+AC+ + L Q H H+ K
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
D DL + N LV Y L +A +VF++++ R + W+TMISG AQ+ + EAL L
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F++M G +PN +T+ VL AC+ +G LE G + F M
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDG--WYYFRSM------------------- 385
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
K L+ P R + MI L G ++A+ L ++E E P+ +T+ +
Sbjct: 386 -------KKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTL 433
Query: 324 LSAC 327
L AC
Sbjct: 434 LGAC 437
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 151/302 (50%), Gaps = 7/302 (2%)
Query: 110 GFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNA 169
G + T++ ++K C + R+++ I H+ +G + +VN L+ Y + LN+A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 170 RQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQS 229
Q+FD++ R + WTTMIS Y++ +AL L ML + PN T +SVL +C
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 230 GCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMI 289
+ + +H + G E + +AL+ ++ K G A ++FD M + WN++I
Sbjct: 176 SDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 290 SGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGI 349
G A + ++ AL+LF+++++ + T VL AC +++G Q + +
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ---AHVHIVKY 289
Query: 350 EPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK 409
+ + +VD+ +CG + +A + +M + DV+ W +++ +G + A ++ +
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 410 EI 411
+
Sbjct: 349 RM 350
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 199 EALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALV 258
A+ D + G +S T + ++ C + + G + + G L L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 259 HMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDI 318
+MY K L A LFD MP+RN+ +W MIS + ++AL+L + ++ + PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 319 TFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKR 378
T+ VL +C G DV G +K G+E + ++D+ + G+ +A +
Sbjct: 164 TYSSVLRSC--NGMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 379 MVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
MV D ++W +++ + +VA + K +
Sbjct: 220 MV-TGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 244/448 (54%), Gaps = 33/448 (7%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQ 76
P+ K ++ + ++H + + D F + + A S G ++YA +F+ +
Sbjct: 116 PILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYA--SCGRINYARNVFDEMS 173
Query: 77 SPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQ 136
+ WNT+I D+A L+ M+ + P++ ++ AC ++ +
Sbjct: 174 HRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRA 233
Query: 137 IHTHVSKSGLDLDLHVVNCLVR------C-------------------------YSVSSD 165
I+ + ++ + +D H++ LV C YS
Sbjct: 234 IYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGR 293
Query: 166 LNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSA 225
L++A+ +FD+ + L WTTMIS Y +S EAL +F++M G +P+ V++ SV+SA
Sbjct: 294 LDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISA 353
Query: 226 CAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATW 285
CA G L+ + VH + + G E + AL++MY K G L + +F+ MP RN+ +W
Sbjct: 354 CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSW 413
Query: 286 NAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
++MI+ L+ HG A +AL LF ++++E + PN++TFVGVL C H+G ++ G++IF SM
Sbjct: 414 SSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Query: 346 VYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAE 405
Y I PK+EHYGCMVDL GR + EA E+I+ M +VV+WG+L++AC+ HG +E+ +
Sbjct: 474 EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGK 533
Query: 406 RVVKEIIALEPNNHGVYVVLSNMYAEAE 433
K I+ LEP++ G V++SN+YA +
Sbjct: 534 FAAKRILELEPDHDGALVLMSNIYAREQ 561
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 200/424 (47%), Gaps = 39/424 (9%)
Query: 11 PPLPIPPLSLLADK---CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
PP+ + + +K CKS++ +KQ+HA ++ + + +H S L SSS +LSY
Sbjct: 5 PPIASTAANTILEKLSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSY 62
Query: 68 ATRLFNSIQSP-NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS 126
A +F+SI SP ++N +R + S P I Y +R G +Q +F +LKA S
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 127 NVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTT 186
V +L ++H K D V + Y+ +N AR VFDE+ +R + W T
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 187 MISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRG 246
MI Y + +EA LF++M P+ + L +++SAC ++G + ++ F+
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 247 FEMGAILGTALVHM-------------------------------YTKNGALAKAKALFD 275
M L TALV M Y+K G L A+ +FD
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 276 SMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDV 335
++++ W MIS + +EAL +F ++ I P+ ++ V+SAC + G +D
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 336 GRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAAC 395
+ + + V G+E ++ ++++ +CG + ++ ++M + +VV W +++ A
Sbjct: 363 AKWVHSCI-HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINAL 420
Query: 396 KNHG 399
HG
Sbjct: 421 SMHG 424
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 258/477 (54%), Gaps = 68/477 (14%)
Query: 21 LADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNH 80
L CK++ LKQIHA M+++ + + L+ +LS G L YA +LF+ I P+
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 81 FMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTH 140
+ N ++R A S+ P+K + LY M + G +P+++TFTFVLKACS + + H
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 141 VSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEA 200
V + G L+ +V N L+ ++ DL A ++FD+ W++M SGYA+ + +EA
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 201 LMLFDQM--------------------------LMEGF-EPNSVTLASVLSACAQSG--- 230
+ LFD+M L + F E + VT +++S G
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 231 ---------------------------CLELGE-----KVHVFV-----KMRGFEMGAIL 253
C LG+ ++H+++ +G +
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 254 GTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQI 313
AL+ MY K G++ +A +F + +R+++TWN +I GLA H HAE ++++F ++++ ++
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKV 376
Query: 314 VPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
PN++TF+GV+ AC H+G +D GR+ F M+ +Y IEP I+HYGCMVD+LGR G++ EA
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF 436
Query: 374 ELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
++ M +P+ ++W LL ACK +GN+E+ + ++++++ + G YV+LSN+YA
Sbjct: 437 MFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYA 493
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 25/330 (7%)
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVS--SDLNNARQVFDEIRNRTLN 182
C N+R+L KQIH + +GL +L VV L+ S+S L A ++FDEI ++
Sbjct: 22 CKNIRTL---KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVS 78
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV 242
+ ++ G AQS + + + L+ +M G P+ T VL AC++ G H V
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 243 KMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEAL 302
GF + + AL+ + G L A LFD + + W++M SG A G +EA+
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 303 DLFRKLE-KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVD 361
LF ++ K+Q+ N + ++ C +D R++F E + + M+
Sbjct: 199 RLFDEMPYKDQVAWNVM-----ITGCLKCKEMDSARELFDRF-----TEKDVVTWNAMIS 248
Query: 362 LLGRCGKVLEAEELIKRMV---WKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNN 418
CG EA + K M PDVV +LL+AC G++E +R+ I+ +
Sbjct: 249 GYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 419 HGVYV------VLSNMYAEAESMKMQLEIL 442
+YV L +MYA+ S+ +E+
Sbjct: 309 SSIYVGTPIWNALIDMYAKCGSIDRAIEVF 338
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 272 bits (695), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 225/392 (57%), Gaps = 8/392 (2%)
Query: 53 LLAFCALSSS--------GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
LL F ALS++ L+ A ++F+S N W+ ++ + + +A+ L+
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS 311
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M G P+++T VL ACS++ L KQ+H+ + K G + L LV Y+ +
Sbjct: 312 RMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAG 371
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLS 224
L +AR+ FD ++ R + +WT++ISGY Q+ EAL+L+ +M G PN T+ASVL
Sbjct: 372 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431
Query: 225 ACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIAT 284
AC+ LELG++VH GF + +G+AL MY+K G+L +F P +++ +
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 285 WNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMK 344
WNAMISGL+ +G +EAL+LF ++ E + P+D+TFV ++SAC H GF++ G F M
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 345 RVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
G++PK++HY CMVDLL R G++ EA+E I+ + +W LL+ACKNHG E+
Sbjct: 552 DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Query: 405 ERVVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
++++AL YV LS +Y M+
Sbjct: 612 VYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 212/394 (53%), Gaps = 14/394 (3%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
+Q HA ++ S D + + L+ +C +G + ++F + N + W+T++
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYC---KAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 91 ASSLNPDKAIF---LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLD 147
A+ ++AI L++ + G + + + FT VL + + + +QIH K+GL
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLL 253
Query: 148 LDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQM 207
+ + N LV YS LN A ++FD +R W+ M++GY+Q+ + EA+ LF +M
Sbjct: 254 GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Query: 208 LMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGAL 267
G +P+ T+ VL+AC+ LE G+++H F+ GFE TALV MY K G L
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 268 AKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSAC 327
A A+ FD + ER++A W ++ISG + EEAL L+R+++ I+PND T VL AC
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 328 CHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVV 386
+++G+Q+ G ++K +G+E I + + +CG LE L+ R DVV
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGS-LEDGNLVFRRTPNKDVV 490
Query: 387 MWGALLAACKNHGNIEVAERVVKEIIA--LEPNN 418
W A+++ ++G + A + +E++A +EP++
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 189/371 (50%), Gaps = 15/371 (4%)
Query: 32 KQIHAQMI---ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
+ +H Q+I S+ IQ A+ L+ F A G L+ A +FN+I + WN+LI
Sbjct: 34 RAVHGQIIRTGASTCIQH---ANVLVNFYA--KCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 89 --AQASSLNPDKAIF-LYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+Q ++ + L+ MR PN +T + KA S+++S +Q H V K
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D++V LV Y + + + +VF + R W+TM+SGYA R EA+ +F+
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 206 QMLMEGFE--PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
L E E + +VLS+ A + + LG ++H G L ALV MY+K
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
+L +A +FDS +RN TW+AM++G + +G + EA+ LF ++ I P++ T VGV
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 324 LSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
L+AC +++ G+Q+ + ++ G E + +VD+ + G + +A + + +
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGFD-CLQER 386
Query: 384 DVVMWGALLAA 394
DV +W +L++
Sbjct: 387 DVALWTSLISG 397
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 119/235 (50%), Gaps = 11/235 (4%)
Query: 114 NQHTFTFVLKAC--SNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQ 171
N HT T + K S R+L + +H + ++G + N LV Y+ L A
Sbjct: 11 NPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 172 VFDEIRNRTLNVWTTMISGYAQSFRANEA---LMLFDQMLMEGFEPNSVTLASVLSACAQ 228
+F+ I + + W ++I+GY+Q+ + + + LF +M + PN+ TLA + A +
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 229 SGCLELGEKVHVF-VKMRGFEMGAI-LGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+G + H VKM F G I + T+LV MY K G + +F MPERN TW+
Sbjct: 131 LQSSTVGRQAHALVVKMSSF--GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 287 AMISGLASHGHAEEALDLFRKL--EKEQIVPNDITFVGVLSACCHAGFIDVGRQI 339
M+SG A+ G EEA+ +F EKE+ +D F VLS+ ++ +GRQI
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 246/487 (50%), Gaps = 73/487 (14%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
LSLL + CK++ L QIH I D + +L+ CA+S S L YA RL
Sbjct: 9 LSLL-NSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 78 PNHFMWNTLIRAQASS------------------LNPDKAIFLYM-----NMR--RTGFA 112
P+ FM+NTL+R + S + PD F ++ N R RTGF
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 113 ------------------------------------------PNQHTFTFVLKACSNVRS 130
PN + V+ AC
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 131 LNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISG 190
+ ++I + L + N ++ Y + +L +A+++F E+ +R W+TMI G
Sbjct: 188 VAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 191 YAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMG 250
A + NE+ + F ++ G PN V+L VLSAC+QSG E G+ +H FV+ G+
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI 303
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMPE-RNIATWNAMISGLASHGHAEEALDLFRKLE 309
+ AL+ MY++ G + A+ +F+ M E R I +W +MI+GLA HG EEA+ LF ++
Sbjct: 304 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
+ P+ I+F+ +L AC HAG I+ G F MKRVY IEP+IEHYGCMVDL GR GK+
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
+A + I +M P ++W LL AC +HGNIE+AE+V + + L+PNN G V+LSN Y
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 430 AEAESMK 436
A A K
Sbjct: 484 ATAGKWK 490
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 212/379 (55%), Gaps = 9/379 (2%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+++Y R+F I N W +LI ++ AI + M+ G N+ +L
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLD--------LDLHVVNCLVRCYSVSSDLNNARQVFD 174
AC + + K H + G D ++ + L+ Y+ DL AR +FD
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 175 EIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLEL 234
+ RTL W ++I+GY+Q+ A EAL +F ML G P+ VT SV+ A GC +L
Sbjct: 276 GMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL 335
Query: 235 GEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLAS 294
G+ +H +V GF A + ALV+MY K G AK F+ + +++ W +I GLAS
Sbjct: 336 GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLAS 395
Query: 295 HGHAEEALDLFRKL-EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKI 353
HGH EAL +F+++ EK P+ IT++GVL AC H G ++ G++ F M+ ++G+EP +
Sbjct: 396 HGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTV 455
Query: 354 EHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIA 413
EHYGCMVD+L R G+ EAE L+K M KP+V +WGALL C H N+E+ +R+ +
Sbjct: 456 EHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAE 515
Query: 414 LEPNNHGVYVVLSNMYAEA 432
E G+YV+LSN+YA+A
Sbjct: 516 PEELGSGIYVLLSNIYAKA 534
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 216/394 (54%), Gaps = 12/394 (3%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALS-SSGDLSYATRLFNS 74
P LS L + C+S+ +L Q+H MI SS I++ SRL+ FC + +LSYA +F S
Sbjct: 8 PILSQL-ENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 75 IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCC 134
I P+ ++WN++IR ++S NPDKA+ Y M R G++P+ TF +VLKACS +R +
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
+H V K+G +++++V CL+ Y ++N +VF++I + W ++ISG+ +
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE------ 248
R ++A+ F +M G + N + +L AC + + G+ H F++ GF+
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 249 --MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR 306
IL T+L+ MY K G L A+ LFD MPER + +WN++I+G + +G AEEAL +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 307 KLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRC 366
+ I P+ +TF+ V+ A G +G+ I + + G +V++ +
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT-GFVKDAAIVCALVNMYAKT 365
Query: 367 GKVLEAEELIKRMVWKPDVVMWGALLAACKNHGN 400
G A++ + + K D + W ++ +HG+
Sbjct: 366 GDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGH 398
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 119/290 (41%), Gaps = 49/290 (16%)
Query: 1 MSLKCSSLRQPPLPIPPLSLL-ADKCKSMHQLKQ-IHAQMIISSRIQDHFAASRLLAFCA 58
M L L P + LS++ A + QL Q IHA + + ++D L+ A
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 363
Query: 59 LSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFA-PNQHT 117
+GD A + F ++ + W +I AS + ++A+ ++ M+ G A P+ T
Sbjct: 364 --KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ VL ACS++ GL + ++ F E+R
Sbjct: 422 YLGVLYACSHI----------------GL-------------------VEEGQRYFAEMR 446
Query: 178 NR-----TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCL 232
+ T+ + M+ +++ R EA L M + +PN ++L+ C L
Sbjct: 447 DLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV---KPNVNIWGALLNGCDIHENL 503
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNI 282
EL +++ V E+G+ + L ++Y K G A K + +SM + +
Sbjct: 504 ELTDRIRSMVA-EPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRV 552
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 270 bits (691), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 243/416 (58%), Gaps = 3/416 (0%)
Query: 21 LADKCKSMHQLKQIHAQMI-ISSRIQDHFAASRLLAFCALSS-SGDLSYATRLFNSIQSP 78
L +C ++ + KQ+HA+ I +S F+AS +LA CA S ++YA +F I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 79 NHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIH 138
F +NT+IR + ++ ++A+ Y M + G P+ T+ +LKAC+ ++S+ KQIH
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 139 THVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V K GL+ D+ V N L+ Y ++ + VF+++ ++T W++M+S A +
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 199 EALMLFDQMLME-GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTAL 257
E L+LF M E + + S L ACA +G L LG +H F+ E+ I+ T+L
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 258 VHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPND 317
V MY K G L KA +F M +RN T++AMISGLA HG E AL +F K+ KE + P+
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 318 ITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIK 377
+ +V VL+AC H+G + GR++F M + +EP EHYGC+VDLLGR G + EA E I+
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 378 RMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
+ + + V+W L+ C+ NIE+ + +E++ L +N G Y+++SN+Y++ +
Sbjct: 396 SIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 13/282 (4%)
Query: 16 PPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSI 75
P L + KS+ + KQIH Q+ D F + L+ G++ ++ +F +
Sbjct: 136 PCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINM--YGRCGEMELSSAVFEKL 193
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCC 134
+S W++++ A+A + + L+ M T + L AC+N +LN
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 135 KQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS 194
IH + ++ +L++ V LV Y L+ A +F ++ R ++ MISG A
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 195 FRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILG 254
AL +F +M+ EG EP+ V SVL+AC+ SG ++ G + VF +M + G +
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRR--VFAEM--LKEGKVEP 369
Query: 255 TA-----LVHMYTKNGALAKAKALFDSMP-ERNIATWNAMIS 290
TA LV + + G L +A S+P E+N W +S
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 269 bits (688), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 239/444 (53%), Gaps = 39/444 (8%)
Query: 32 KQIHAQMI---ISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIR 88
K++H ++ + S + A ++ + C L + A +F+ + F WN +I
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGL-----MDMARGVFDRRCKEDVFSWNLMIS 209
Query: 89 AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDL 148
+++I L + M R +P T VL ACS V+ + CK++H +VS+ +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 149 DLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQS-------------- 194
L + N LV Y+ +++ A ++F ++ R + WT+++ GY +
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 195 --------------FRA---NEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
RA NE+L +F +M G P+ T+ SVL+ACA G LE+GE
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
+ ++ + ++G AL+ MY K G KA+ +F M +R+ TW AM+ GLA++G
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYG 357
+EA+ +F +++ I P+DIT++GVLSAC H+G +D R+ F M+ + IEP + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 358 CMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPN 417
CMVD+LGR G V EA E++++M P+ ++WGALL A + H + +AE K+I+ LEP+
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 418 NHGVYVVLSNMYAEAESMKMQLEI 441
N VY +L N+YA + K E+
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREV 593
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 214/442 (48%), Gaps = 48/442 (10%)
Query: 25 CKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWN 84
CK+ Q KQ+H+Q I + +L F G +SYA +LF I P+ +WN
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWN 103
Query: 85 TLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACS-NVRSLNCCKQIHTHVSK 143
+I+ + + + LY+NM + G P+ HTF F+L + +L C K++H HV K
Sbjct: 104 NMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
GL +L+V N LV+ YS+ ++ AR VFD + W MISGY + E++ L
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIEL 223
Query: 204 FDQMLMEGFEPNSVTLASVLSAC---------------------------------AQSG 230
+M P SVTL VLSAC A +
Sbjct: 224 LVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAA 283
Query: 231 CLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMIS 290
C E+ V +F M+ ++ I T++V Y + G L A+ FD MP R+ +W MI
Sbjct: 284 CGEMDIAVRIFRSMKARDV--ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 291 GLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
G G E+L++FR+++ ++P++ T V VL+AC H G +++G I + Y +
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI-----KTYIDK 396
Query: 351 PKIEHY----GCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
KI++ ++D+ +CG +A+++ M + D W A++ N+G + A +
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVGLANNGQGQEAIK 455
Query: 407 VVKEI--IALEPNNHGVYVVLS 426
V ++ ++++P++ VLS
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLS 477
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 269 bits (687), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 230/409 (56%), Gaps = 4/409 (0%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+++ +++HA MI + + + +RLL F L A ++ + + N W
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC--LEDARKVLDEMPEKNVVSWTA 123
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + + + +A+ ++ M R+ PN+ TF VL +C L KQIH + K
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
D + V + L+ Y+ + + AR++F+ + R + T +I+GYAQ EAL +F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
++ EG PN VT AS+L+A + L+ G++ H V R A+L +L+ MY+K G
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVL 324
L+ A+ LFD+MPER +WNAM+ G + HG E L+LFR + E+ V P+ +T + VL
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 325 SACCHAGFIDVGRQIF-GSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKP 383
S C H D G IF G + YG +P EHYGC+VD+LGR G++ EA E IKRM KP
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 423
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
+ G+LL AC+ H ++++ E V + +I +EP N G YV+LSN+YA A
Sbjct: 424 TAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASA 472
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 192/365 (52%), Gaps = 18/365 (4%)
Query: 70 RLFNSIQSPNHFMWNTLIR-AQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNV 128
R F+S SP +++ T++ +Q S + L M M G H + +L AC +
Sbjct: 10 RSFSS--SPTNYVLQTILPISQLCSNGRLQEALLEMAM--LGPEMGFHGYDALLNACLDK 65
Query: 129 RSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMI 188
R+L +++H H+ K+ ++ L+ Y L +AR+V DE+ + + WT MI
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125
Query: 189 SGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFE 248
S Y+Q+ ++EAL +F +M+ +PN T A+VL++C ++ L LG+++H + ++
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL 308
+G++L+ MY K G + +A+ +F+ +PER++ + A+I+G A G EEAL++F +L
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 309 EKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC----MVDLLG 364
E + PN +T+ +L+A +D G+Q + + ++ Y ++D+
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYAVLQNSLIDMYS 300
Query: 365 RCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHG-NIEVAE--RVVKEIIALEPNNHGV 421
+CG + A L M + + W A+L HG EV E R++++ ++P+ +
Sbjct: 301 KCGNLSYARRLFDNMPERT-AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTL 359
Query: 422 YVVLS 426
VLS
Sbjct: 360 LAVLS 364
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 268 bits (686), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 222/390 (56%), Gaps = 4/390 (1%)
Query: 45 QDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYM 104
+D F + L + S GDL A +F + + + ++I A +A+ L+
Sbjct: 330 EDRFCNTLLDMY---SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 105 NMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSS 164
M G +P+ +T T VL C+ R L+ K++H + ++ L D+ V N L+ Y+
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 165 DLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG-FEPNSVTLASVL 223
+ A VF E+R + + W T+I GY+++ ANEAL LF+ +L E F P+ T+A VL
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 224 SACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIA 283
ACA + G ++H ++ G+ + +LV MY K GAL A LFD + +++
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 284 TWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSM 343
+W MI+G HG +EA+ LF ++ + I ++I+FV +L AC H+G +D G + F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 344 KRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEV 403
+ IEP +EHY C+VD+L R G +++A I+ M PD +WGALL C+ H ++++
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 404 AERVVKEIIALEPNNHGVYVVLSNMYAEAE 433
AE+V +++ LEP N G YV+++N+YAEAE
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAE 716
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 199/386 (51%), Gaps = 7/386 (1%)
Query: 10 QPPLPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYAT 69
P L L AD KS+ K++ + + + D S+L ++ GDL A+
Sbjct: 93 DPRTLCSVLQLCADS-KSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEAS 149
Query: 70 RLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVR 129
R+F+ ++ WN L+ A S + +I L+ M +G + +TF+ V K+ S++R
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 130 SLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMIS 189
S++ +Q+H + KSG V N LV Y + +++AR+VFDE+ R + W ++I+
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 190 GYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM 249
GY + A + L +F QML+ G E + T+ SV + CA S + LG VH F
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 250 GAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLE 309
L+ MY+K G L AKA+F M +R++ ++ +MI+G A G A EA+ LF ++E
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR-VYGIEPKIEHYGCMVDLLGRCGK 368
+E I P+ T VL+ C +D G+++ +K G + + + ++D+ +CG
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGS 447
Query: 369 VLEAEELIKRMVWKPDVVMWGALLAA 394
+ EAE + M K D++ W ++
Sbjct: 448 MQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 198/375 (52%), Gaps = 5/375 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+H +Q+H ++ S + + + L+AF + D A ++F+ + + WN+
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD--SARKVFDEMTERDVISWNS 266
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I S+ +K + +++ M +G + T V C++ R ++ + +H+ K+
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
+ N L+ YS DL++A+ VF E+ +R++ +T+MI+GYA+ A EA+ LF+
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 206 QMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNG 265
+M EG P+ T+ +VL+ CA+ L+ G++VH ++K + AL+ MY K G
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 266 ALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFR-KLEKEQIVPNDITFVGVL 324
++ +A+ +F M ++I +WN +I G + + +A EAL LF LE+++ P++ T VL
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
AC D GR+I G + R G +VD+ +CG +L A L + K D
Sbjct: 507 PACASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-D 564
Query: 385 VVMWGALLAACKNHG 399
+V W ++A HG
Sbjct: 565 LVSWTVMIAGYGMHG 579
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 172/346 (49%), Gaps = 8/346 (2%)
Query: 84 NTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSK 143
NT +R S N + A+ L + P T VL+ C++ +SL K++ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 144 SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALML 203
+G +D ++ + L Y+ DL A +VFDE++ W +++ A+S + ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 204 FDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTK 263
F +M+ G E +S T + V + + + GE++H F+ GF +G +LV Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 264 NGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGV 323
N + A+ +FD M ER++ +WN++I+G S+G AE+ L +F ++ I + T V V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 324 LSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWK 382
+ C + I +GR + +K + E + ++D+ +CG + A+ + + M +
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRF--CNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 383 PDVVMWGALLAACKNHGNIEVAERVVKEI--IALEPNNHGVYVVLS 426
VV + +++A G A ++ +E+ + P+ + V VL+
Sbjct: 361 S-VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 241/427 (56%), Gaps = 5/427 (1%)
Query: 9 RQPPLPIPPLS-LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
+Q PL LS LL QLK+IHA ++ + + + ++LL L GD+ Y
Sbjct: 4 KQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLE--NLVVIGDMCY 61
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
A ++F+ + P F+WNTL + + P +++ LY MR G P++ T+ FV+KA S
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ +C +H HV K G V LV Y +L++A +F+ ++ + L W
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
++ Q+ + AL F++M + + +S T+ S+LSAC Q G LE+GE+++ +
Sbjct: 182 LAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEI 241
Query: 248 EMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRK 307
+ I+ A + M+ K G A+ LF+ M +RN+ +W+ MI G A +G + EAL LF
Sbjct: 242 DCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTT 301
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV--YGIEPKIEHYGCMVDLLGR 365
++ E + PN +TF+GVLSAC HAG ++ G++ F M + +EP+ EHY CMVDLLGR
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR 361
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G + EA E IK+M +PD +WGALL AC H ++ + ++V ++ P+ +V+L
Sbjct: 362 SGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLL 421
Query: 426 SNMYAEA 432
SN+YA A
Sbjct: 422 SNIYAAA 428
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 252/450 (56%), Gaps = 20/450 (4%)
Query: 3 LKCSSLRQ----PPLPIPPLSLLADKCKSMHQL---KQIHAQMIISSRIQDHFAASRLLA 55
L SS+R+ P P ++ A C S+ + KQ H Q + D F +S L+
Sbjct: 62 LAFSSMRKLSLYPTRSSFPCAIKA--CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIV 119
Query: 56 FCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQ 115
S+ G L A ++F+ I N W ++IR + N A+ L+ ++ +
Sbjct: 120 M--YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDD 177
Query: 116 HTF------TFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSD--LN 167
F V+ ACS V + + IH+ V K G D + V N L+ Y+ + +
Sbjct: 178 AMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 168 NARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEP-NSVTLASVLSAC 226
AR++FD+I ++ + +++S YAQS +NEA +F +++ N++TL++VL A
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
+ SG L +G+ +H V G E I+GT+++ MY K G + A+ FD M +N+ +W
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWT 357
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRV 346
AMI+G HGHA +AL+LF + + PN ITFV VL+AC HAG G + F +MK
Sbjct: 358 AMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Query: 347 YGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAER 406
+G+EP +EHYGCMVDLLGR G + +A +LI+RM KPD ++W +LLAAC+ H N+E+AE
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 407 VVKEIIALEPNNHGVYVVLSNMYAEAESMK 436
V + L+ +N G Y++LS++YA+A K
Sbjct: 478 SVARLFELDSSNCGYYMLLSHIYADAGRWK 507
Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 201/384 (52%), Gaps = 18/384 (4%)
Query: 69 TRLFNS-IQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
T LFN + + F WN++I A S + +A+ + +MR+ P + +F +KACS+
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ + KQ H G D+ V + L+ YS L +AR+VFDEI R + WT+M
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEP------NSVTLASVLSACAQSGCLELGEKVHVF 241
I GY + A +A+ LF +L++ + +S+ L SV+SAC++ L E +H F
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 242 VKMRGFEMGAILGTALVHMYTK--NGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V RGF+ G +G L+ Y K G +A A+ +FD + +++ ++N+++S A G +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 300 EALDLFRKLEKEQIVP-NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGC 358
EA ++FR+L K ++V N IT VL A H+G + +G+ I + R+ G+E +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTS 327
Query: 359 MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEII--ALEP 416
++D+ +CG+V A + RM K +V W A++A HG+ A + +I + P
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 417 NNHGVYVVLSNMYAEAESMKMQLE 440
N Y+ ++ A + +E
Sbjct: 387 N----YITFVSVLAACSHAGLHVE 406
>sp|Q3ECB8|PP128_ARATH Pentatricopeptide repeat-containing protein At1g77170
OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1
Length = 467
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 232/425 (54%), Gaps = 38/425 (8%)
Query: 14 PIPP------LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSY 67
P+ P L+ L C S+ ++++IH I SRI D
Sbjct: 40 PLSPQDRNKLLATLLSNCTSLARVRRIHGD-IFRSRILD--------------------- 77
Query: 68 ATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSN 127
Q P F+WN ++R+ +P AI +Y+ M R+ P++++ V+KA
Sbjct: 78 --------QYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQ 129
Query: 128 VRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTM 187
+ K++H+ + G D + + Y + + NAR+VFDE R L W +
Sbjct: 130 IHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAI 189
Query: 188 ISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGF 247
I G + RANEA+ +F M G EP+ T+ SV ++C G L L ++H V
Sbjct: 190 IGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKT 249
Query: 248 EMGA--ILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF 305
E + ++ +L+ MY K G + A +F+ M +RN+ +W++MI G A++G+ EAL+ F
Sbjct: 250 EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECF 309
Query: 306 RKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGR 365
R++ + + PN ITFVGVLSAC H G ++ G+ F MK + +EP + HYGC+VDLL R
Sbjct: 310 RQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSR 369
Query: 366 CGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVL 425
G++ EA+++++ M KP+V++WG L+ C+ G++E+AE V ++ LEP N GVYVVL
Sbjct: 370 DGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVL 429
Query: 426 SNMYA 430
+N+YA
Sbjct: 430 ANVYA 434
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 226/392 (57%), Gaps = 1/392 (0%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFT 119
+ G L A +LF+ + N WN++I A + NP +A+ ++ M G P +
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341
Query: 120 FVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR 179
L AC+++ L + IH + GLD ++ VVN L+ Y +++ A +F ++++R
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 180 TLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH 239
TL W MI G+AQ+ R +AL F QM +P++ T SV++A A+ + +H
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 240 VFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAE 299
V + + TALV MY K GA+ A+ +FD M ER++ TWNAMI G +HG +
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 300 EALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCM 359
AL+LF +++K I PN +TF+ V+SAC H+G ++ G + F MK Y IE ++HYG M
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 360 VDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNH 419
VDLLGR G++ EA + I +M KP V ++GA+L AC+ H N+ AE+ + + L P++
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 420 GVYVVLSNMYAEAESMKMQLEILLVQVLFAGL 451
G +V+L+N+Y A SM ++ + V +L GL
Sbjct: 642 GYHVLLANIY-RAASMWEKVGQVRVSMLRQGL 672
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 208/384 (54%), Gaps = 6/384 (1%)
Query: 17 PLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLA-FCALSSSGDLSYATRLFNSI 75
P +LL ++C S+ +L+QI + + Q+HF ++L++ FC G + A R+F I
Sbjct: 39 PAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY---GSVDEAARVFEPI 95
Query: 76 QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCK 135
S + +++T+++ A + DKA+ ++ MR P + FT++LK C + L K
Sbjct: 96 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 155
Query: 136 QIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSF 195
+IH + KSG LDL + L Y+ +N AR+VFD + R L W T+++GY+Q+
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 196 RANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
A AL + M E +P+ +T+ SVL A + + +G+++H + GF+ + T
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
ALV MY K G+L A+ LFD M ERN+ +WN+MI + + +EA+ +F+K+ E + P
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 316 NDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEEL 375
D++ +G L AC G ++ GR I + G++ + ++ + +C +V A +
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIH-KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 376 IKRMVWKPDVVMWGALLAACKNHG 399
++ + +V W A++ +G
Sbjct: 395 FGKLQSRT-LVSWNAMILGFAQNG 417
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 188/388 (48%), Gaps = 6/388 (1%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K+IH ++ S D FA + L A ++ A ++F+ + + WNT++ +
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYA--KCRQVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ A+ + +M P+ T VL A S +R ++ K+IH + +SG D ++
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
+ LV Y+ L ARQ+FD + R + W +MI Y Q+ EA+++F +ML EG
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
+P V++ L ACA G LE G +H G + + +L+ MY K + A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
++F + R + +WNAMI G A +G +AL+ F ++ + P+ T+V V++A
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
+ I G + R ++ + +VD+ +CG ++ A LI M+ + V W A+
Sbjct: 453 ITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAM 510
Query: 392 LAACKNHGNIEVAERVVKEII--ALEPN 417
+ HG + A + +E+ ++PN
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPN 538
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 216/369 (58%), Gaps = 3/369 (0%)
Query: 65 LSYATRLFNSI-QSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLK 123
LS A +LF I + N WNT+++ K I L+ ++ G + + T V+
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 124 ACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNV 183
+CS++ ++ K +H +V K+ LDL + VVN L+ Y DL A ++F E +
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVIT- 500
Query: 184 WTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVK 243
W MI+ Y ++ +A+ LFD+M+ E F+P+S+TL ++L AC +G LE G+ +H ++
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
EM L AL+ MY K G L K++ LFD+ +++ WN MISG HG E A+
Sbjct: 561 ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIA 620
Query: 304 LFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLL 363
LF ++E+ + P TF+ +LSAC HAG ++ G+++F M + Y ++P ++HY C+VDLL
Sbjct: 621 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLL 679
Query: 364 GRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
R G + EAE + M + PD V+WG LL++C HG E+ R+ + +A +P N G Y+
Sbjct: 680 SRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYI 739
Query: 424 VLSNMYAEA 432
+L+NMY+ A
Sbjct: 740 MLANMYSAA 748
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 178/384 (46%), Gaps = 9/384 (2%)
Query: 25 CKSMHQLKQ---IHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHF 81
C ++ LK+ +H + + F S + +F S SG+ S A F + + F
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSF--YSKSGNPSEAYLSFRELGDEDMF 297
Query: 82 MWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
W ++I + A S + +++ ++ M+ G P+ + ++ + + K H V
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNR-TLNVWTTMISGYAQSFRANEA 200
+ LD V N L+ Y L+ A ++F I W TM+ GY + +
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 201 LMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHM 260
+ LF ++ G E +S + SV+S+C+ G + LG+ +H +V ++ + +L+ +
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 477
Query: 261 YTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITF 320
Y K G L A +F + N+ TWNAMI+ +E+A+ LF ++ E P+ IT
Sbjct: 478 YGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITL 536
Query: 321 VGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMV 380
V +L AC + G ++ G+ I + E + ++D+ +CG + ++ EL
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595
Query: 381 WKPDVVMWGALLAACKNHGNIEVA 404
K D V W +++ HG++E A
Sbjct: 596 QK-DAVCWNVMISGYGMHGDVESA 618
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 162/312 (51%), Gaps = 11/312 (3%)
Query: 20 LLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPN 79
+L D+ S+ L++ +A +I ++ F AS+L++ + +S G + ++R+F+ + +
Sbjct: 32 ILCDQSLSLESLRKHNALIITGGLSENIFVASKLIS--SYASYGKPNLSSRVFHLVTRRD 89
Query: 80 HFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHT 139
F+WN++I+A S+ + +++ + +M +G +P+ T V+ AC+ + + +H
Sbjct: 90 IFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHG 149
Query: 140 HVSK-SGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRAN 198
V K G D + V V YS L +A VFDE+ +R + WT +ISG+ Q+ +
Sbjct: 150 LVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESE 209
Query: 199 EALMLFDQMLMEGFE---PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGT 255
L +M G + PN TL AC+ G L+ G +H F G + +
Sbjct: 210 GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQS 269
Query: 256 ALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVP 315
++ Y+K+G ++A F + + ++ +W ++I+ LA G EE+ D+F +++ + + P
Sbjct: 270 SMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP 329
Query: 316 NDITFVGVLSAC 327
+ GV+ +C
Sbjct: 330 D-----GVVISC 336
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 178/420 (42%), Gaps = 37/420 (8%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGF---APNQH 116
S G L A +F+ + + W +I + + + M G PN
Sbjct: 172 SKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPR 231
Query: 117 TFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEI 176
T +ACSN+ +L + +H K+GL V + + YS S + + A F E+
Sbjct: 232 TLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 177 RNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGE 236
+ + WT++I+ A+S E+ +F +M +G P+ V ++ +++ + + G+
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Query: 237 KVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPER-NIATWNAMISGLASH 295
H FV F + + + +L+ MY K L+ A+ LF + E N WN M+ G
Sbjct: 352 AFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKM 411
Query: 296 GHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKR------VYGI 349
+ ++LFRK++ I + + V+S+C H G + +G+ + + + + +
Sbjct: 412 KCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVV 471
Query: 350 EPKIEHYGCMVDL-----------------------LGRCGKVLEAEELIKRMV---WKP 383
I+ YG M DL C + +A L RMV +KP
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKP 531
Query: 384 DVVMWGALLAACKNHGNIEVAERVVKEIIALEPN-NHGVYVVLSNMYAEAESMKMQLEIL 442
+ LL AC N G++E + + + I E N + L +MYA+ ++ E+
Sbjct: 532 SSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 6/282 (2%)
Query: 125 CSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVW 184
C SL ++ + + GL ++ V + L+ Y+ N + +VF + R + +W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 185 TTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV-K 243
++I + + +L F ML+ G P+ T V+SACA+ +G VH V K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 244 MRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALD 303
GF+ +G + V+ Y+K G L A +FD MP+R++ W A+ISG +G +E L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 304 LFRKLE---KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMV 360
K+ + PN T AC + G + GR + G + G+ M
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVK-NGLASSKFVQSSMF 272
Query: 361 DLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIE 402
+ G EA L R + D+ W +++A+ G++E
Sbjct: 273 SFYSKSGNPSEA-YLSFRELGDEDMFSWTSIIASLARSGDME 313
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 34/173 (19%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G L + LF++ + WN +I + + AI L+ M + P TF +L
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 641
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC++ + K++ + + + +L +CLV S S +L A
Sbjct: 642 SACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAE------------ 689
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELG 235
+T++S F P+ V ++LS+C G E+G
Sbjct: 690 --STVMS--------------------MPFSPDGVIWGTLLSSCMTHGEFEMG 720
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 229/401 (57%), Gaps = 3/401 (0%)
Query: 33 QIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQAS 92
QIH I S + A L A G L+ A R+F+ I+ P+ WN +I A+
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYA--RCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 93 SLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHV 152
+ D+A+ ++ MR +GF P+ + +L A + +L+ QIH+++ K G DL V
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 153 VNCLVRCYSVSSDLNNARQVFDEIRNRTLNV-WTTMISGYAQSFRANEALMLFDQMLMEG 211
N L+ Y+ SDL +F++ RN +V W T+++ Q + E L LF ML+
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 212 FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAK 271
EP+ +T+ ++L C + L+LG +VH + G + L+ MY K G+L +A+
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 272 ALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAG 331
+FDSM R++ +W+ +I G A G EEAL LF++++ I PN +TFVGVL+AC H G
Sbjct: 529 RIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVG 588
Query: 332 FIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGAL 391
++ G +++ +M+ +GI P EH C+VDLL R G++ EAE I M +PDVV+W L
Sbjct: 589 LVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Query: 392 LAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEA 432
L+ACK GN+ +A++ + I+ ++P N +V+L +M+A +
Sbjct: 649 LSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASS 689
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 4/374 (1%)
Query: 26 KSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNT 85
+S+ Q ++IH ++ S+ D + +L+ G L A +F+ + N + +
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGSLRDAREVFDFMPERNLVSYTS 138
Query: 86 LIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSG 145
+I + + +AI LY+ M + P+Q F ++KAC++ + KQ+H V K
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 146 LDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFD 205
L N L+ Y + +++A +VF I + L W+++I+G++Q EAL
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 206 QMLMEG-FEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKN 264
+ML G F PN S L AC+ + G ++H AI G +L MY +
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 265 GALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVL 324
G L A+ +FD + + A+WN +I+GLA++G+A+EA+ +F ++ +P+ I+ +L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 325 SACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPD 384
A + G QI + + +G + ++ + C + L + D
Sbjct: 379 CAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNAD 437
Query: 385 VVMWGALLAACKNH 398
V W +L AC H
Sbjct: 438 SVSWNTILTACLQH 451
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 5/307 (1%)
Query: 107 RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDL 166
+ + F T+ ++ ACS+ RSL ++IH H+ S D + N ++ Y L
Sbjct: 59 KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSL 118
Query: 167 NNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSAC 226
+AR+VFD + R L +T++I+GY+Q+ + EA+ L+ +ML E P+ S++ AC
Sbjct: 119 RDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKAC 178
Query: 227 AQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWN 286
A S + LG+++H V I AL+ MY + ++ A +F +P +++ +W+
Sbjct: 179 ASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWS 238
Query: 287 AMISGLASHGHAEEALDLFRKLEKEQIV-PNDITFVGVLSACCHAGFIDVGRQIFGSMKR 345
++I+G + G EAL +++ + PN+ F L AC D G QI G +
Sbjct: 239 SIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK 298
Query: 346 VYGIEPKIEHYGC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVA 404
I GC + D+ RCG + A + + + +PD W ++A N+G + A
Sbjct: 299 SELAGNAIA--GCSLCDMYARCGFLNSARRVFDQ-IERPDTASWNVIIAGLANNGYADEA 355
Query: 405 ERVVKEI 411
V ++
Sbjct: 356 VSVFSQM 362
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 265 bits (678), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 237/401 (59%), Gaps = 3/401 (0%)
Query: 31 LKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQ 90
LK++H + + + A+ +A + + G LSYA R+F+ I+S WN LI
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVA--SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 91 ASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDL 150
A S +P ++ ++ M+ +G P+ T +L ACS ++SL K++H + ++ L+ DL
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 151 HVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLME 210
V ++ Y +L + +FD + +++L W T+I+GY Q+ + AL +F QM++
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 211 GFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKA 270
G + +++ V AC+ L LG + H + E A + +L+ MY KNG++ ++
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 651
Query: 271 KALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHA 330
+F+ + E++ A+WNAMI G HG A+EA+ LF ++++ P+D+TF+GVL+AC H+
Sbjct: 652 SKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHS 711
Query: 331 GFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELI-KRMVWKPDVVMWG 389
G I G + MK +G++P ++HY C++D+LGR G++ +A ++ + M + DV +W
Sbjct: 712 GLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWK 771
Query: 390 ALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYA 430
+LL++C+ H N+E+ E+V ++ LEP YV+LSN+YA
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 205/415 (49%), Gaps = 18/415 (4%)
Query: 24 KCKSMHQLKQIHAQMIISSRIQ-DHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFM 82
K K + ++IH + S+R++ D +R++ A+ S D S +F++++S N F
Sbjct: 96 KRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF--VFDALRSKNLFQ 153
Query: 83 WNTLIRAQASSLNPDKAIFLYMNM-RRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHV 141
WN +I + + + D+ + ++ M T P+ T+ V+KAC+ + + +H V
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 142 SKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEAL 201
K+GL D+ V N LV Y + +A Q+FD + R L W +MI ++ + + E+
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 202 MLFDQMLME----GFEPNSVTLASVLSACAQSGCLELGEKVHVF-VKMRGFEMGAILGTA 256
+L +M+ E F P+ TL +VL CA+ + LG+ VH + VK+R + +L A
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR-LDKELVLNNA 332
Query: 257 LVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKL--EKEQIV 314
L+ MY+K G + A+ +F +N+ +WN M+ G ++ G D+ R++ E +
Sbjct: 333 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 392
Query: 315 PNDITFVGVLSACCHAGFIDVGRQIFG-SMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAE 373
+++T + + C H F+ +++ S+K+ + + + V +CG + A+
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQ 450
Query: 374 ELIKRMVWKPDVVMWGALLA--ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLS 426
+ + K V W AL+ A N + + + +I L P++ V +LS
Sbjct: 451 RVFHGIRSKT-VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 170/358 (47%), Gaps = 12/358 (3%)
Query: 60 SSSGDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTG--FAPNQHT 117
S G ++ A +F + N WNT++ ++ + + M G ++ T
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 118 FTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIR 177
+ C + L K++H + K + V N V Y+ L+ A++VF IR
Sbjct: 398 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 457
Query: 178 NRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEK 237
++T+N W +I G+AQS +L QM + G P+S T+ S+LSAC++ L LG++
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Query: 238 VHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGH 297
VH F+ E + +++ +Y G L +ALFD+M ++++ +WN +I+G +G
Sbjct: 518 VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGF 577
Query: 298 AEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEH-- 355
+ AL +FR++ I I+ + V AC + +GR+ Y ++ +E
Sbjct: 578 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDA 632
Query: 356 -YGC-MVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEI 411
C ++D+ + G + ++ ++ + K W A++ HG + A ++ +E+
Sbjct: 633 FIACSLIDMYAKNGSITQSSKVFNGLKEKS-TASWNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 154/328 (46%), Gaps = 25/328 (7%)
Query: 115 QHTFTFVLKACSNVRSLNCCKQIHTHVSKSG-LDLDLHVVNCLVRCYSVSSDLNNARQVF 173
+ +L+A + + ++IH VS S L D + ++ Y++ +++R VF
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 174 DEIRNRTLNVWTTMISGYAQSFRANEALMLFDQML-MEGFEPNSVTLASVLSACAQSGCL 232
D +R++ L W +IS Y+++ +E L F +M+ P+ T V+ ACA +
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 233 ELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGL 292
+G VH V G +G ALV Y +G + A LFD MPERN+ +WN+MI
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 293 ASHGHAEEALDLFRKLEKEQ----IVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYG 348
+ +G +EE+ L ++ +E +P+ T V VL C I +G+ + G ++
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR- 322
Query: 349 IEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVV 408
++ ++ ++D+ +CG + A ++I +M +VV W ++
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG-------------- 367
Query: 409 KEIIALEPNNHGVYVVLSNMYAEAESMK 436
+ E + HG + VL M A E +K
Sbjct: 368 ---FSAEGDTHGTFDVLRQMLAGGEDVK 392
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 113/236 (47%), Gaps = 12/236 (5%)
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFV----KMRGFE 248
+SFR + + D+ + F L +L A + +E+G K+H V ++R +
Sbjct: 61 KSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDD 120
Query: 249 MGAILGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLF-RK 307
+L T ++ MY G+ ++ +FD++ +N+ WNA+IS + + +E L+ F
Sbjct: 121 ---VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177
Query: 308 LEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCG 367
+ ++P+ T+ V+ AC + +G + G + + G+ + +V G G
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNALVSFYGTHG 236
Query: 368 KVLEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYV 423
V +A +L M + ++V W +++ ++G E + ++ E+ +E N G ++
Sbjct: 237 FVTDALQLFDIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEM--MEENGDGAFM 289
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 237/421 (56%), Gaps = 14/421 (3%)
Query: 18 LSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQS 77
+ + KC S Q+KQ+ + + + Q F SRLL CA+S GDLS+A ++F I
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 78 PNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAP------NQHTFTFVLKACSNVRSL 131
P WN +IR A S +P A Y +M + + + T +F LKAC+
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCS 125
Query: 132 NCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGY 191
+ Q+H +++ GL D + L+ YS + DL +A ++FDE+ R + W +I+G
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGL 185
Query: 192 AQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEM-G 250
RA+EA+ L+ +M EG + VT+ + L AC+ G ++ GE + G+
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI-----FHGYSNDN 240
Query: 251 AILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEEALDLFRKLE 309
I+ A + MY+K G + KA +F+ ++++ TWN MI+G A HG A AL++F KLE
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 310 KEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKV 369
I P+D++++ L+AC HAG ++ G +F +M G+E ++HYGC+VDLL R G++
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRL 359
Query: 370 LEAEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMY 429
EA ++I M PD V+W +LL A + + ++E+AE +EI + NN G +V+LSN+Y
Sbjct: 360 REAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVY 419
Query: 430 A 430
A
Sbjct: 420 A 420
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 189/288 (65%)
Query: 154 NCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEGFE 213
NCL+ Y +L A +F+++ + + WTTMI GY+Q+ R EA+ +F +M+ EG
Sbjct: 225 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 284
Query: 214 PNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAILGTALVHMYTKNGALAKAKAL 273
P+ VT+++V+SACA G LE+G++VH++ GF + +G+ALV MY+K G+L +A +
Sbjct: 285 PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLV 344
Query: 274 FDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQIVPNDITFVGVLSACCHAGFI 333
F ++P++N+ WN++I GLA+HG A+EAL +F K+E E + PN +TFV V +AC HAG +
Sbjct: 345 FFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLV 404
Query: 334 DVGRQIFGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLEAEELIKRMVWKPDVVMWGALLA 393
D GR+I+ SM Y I +EHYG MV L + G + EA ELI M ++P+ V+WGALL
Sbjct: 405 DEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 464
Query: 394 ACKNHGNIEVAERVVKEIIALEPNNHGVYVVLSNMYAEAESMKMQLEI 441
C+ H N+ +AE +++ LEP N G Y +L +MYAE + EI
Sbjct: 465 GCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEI 512
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 194/408 (47%), Gaps = 49/408 (12%)
Query: 13 LPIPPLSLLADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72
L P L + +C + L+ A MI +S QD ++ + C DL+ +T
Sbjct: 26 LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVST--M 83
Query: 73 NSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLN 132
+Q PN F++N L + + +P +++ LY+ M R +P+ +T++ ++KA S
Sbjct: 84 TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFG 143
Query: 133 CCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYA 192
+ + H+ K G + + L+ YS + + AR+VFDE+ R WTTM+S Y
Sbjct: 144 --ESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR 201
Query: 193 QSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVHVFVKMRGFEMGAI 252
+ + A L +QM E N T S CL
Sbjct: 202 RVLDMDSANSLANQMS----EKNEAT----------SNCL-------------------- 227
Query: 253 LGTALVHMYTKNGALAKAKALFDSMPERNIATWNAMISGLASHGHAEEALDLFRKLEKEQ 312
++ Y G L +A++LF+ MP ++I +W MI G + + EA+ +F K+ +E
Sbjct: 228 -----INGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 282
Query: 313 IVPNDITFVGVLSACCHAGFIDVGRQI-FGSMKRVYGIEPKIEHYGCMVDLLGRCGKVLE 371
I+P+++T V+SAC H G +++G+++ +++ + ++ I +VD+ +CG LE
Sbjct: 283 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIG--SALVDMYSKCGS-LE 339
Query: 372 AEELIKRMVWKPDVVMWGALLAACKNHGNIEVAERVVK--EIIALEPN 417
L+ + K ++ W +++ HG + A ++ E+ +++PN
Sbjct: 340 RALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 387
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 63 GDLSYATRLFNSIQSPNHFMWNTLIRAQASSLNPDKAIFLYMNMRRTGFAPNQHTFTFVL 122
G+L A LFN + + W T+I+ + + +AI ++ M G P++ T + V+
Sbjct: 235 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 294
Query: 123 KACSNVRSLNCCKQIHTHVSKSGLDLDLHVVNCLVRCYSVSSDLNNARQVFDEIRNRTLN 182
AC+++ L K++H + ++G LD+++ + LV YS L A VF + + L
Sbjct: 295 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 354
Query: 183 VWTTMISGYAQSFRANEALMLFDQMLMEGFEPNSVTLASVLSACAQSGCLELGEKVH-VF 241
W ++I G A A EAL +F +M ME +PN+VT SV +AC +G ++ G +++
Sbjct: 355 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 414
Query: 242 VKMRGFEMGAILGTALVHMYTKNGALAKAKALFDSMP-ERNIATWNAMISGLASHGHAEE 300
+ +VH+++K G + +A L +M E N W A++ G H +
Sbjct: 415 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVI 474
Query: 301 ALDLFRKLEKEQIVPNDITFVGVLSACCHAGFIDVGRQIFGSMKRVYGIE 350
A F KL + + + F+ V + DV +I G M+ + GIE
Sbjct: 475 AEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVA-EIRGRMREL-GIE 522
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 35/195 (17%)
Query: 32 KQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLFNSIQSPNHFMWNTLIRAQA 91
K++H + + + D + S L+ S G L A +F ++ N F WN++I A
Sbjct: 307 KEVHMYTLQNGFVLDVYIGSALVDM--YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 364
Query: 92 SSLNPDKAIFLYMNMRRTGFAPNQHTFTFVLKACSNVRSLNCCKQIHTHVSKSGLDLDLH 151
+ +A+ ++ M PN TF V AC++ ++ ++I+
Sbjct: 365 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY------------- 411
Query: 152 VVNCLVRCYSVSSDLNNARQVFDEIRNRTLNVWTTMISGYAQSFRANEALMLFDQMLMEG 211
++ YS+ S++ + + M+ ++++ EAL L M
Sbjct: 412 --RSMIDDYSIVSNVEH---------------YGGMVHLFSKAGLIYEALELIGNM---E 451
Query: 212 FEPNSVTLASVLSAC 226
FEPN+V ++L C
Sbjct: 452 FEPNAVIWGALLDGC 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 287,839,883
Number of Sequences: 539616
Number of extensions: 11783687
Number of successful extensions: 33397
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 26555
Number of HSP's gapped (non-prelim): 1988
length of query: 818
length of database: 191,569,459
effective HSP length: 126
effective length of query: 692
effective length of database: 123,577,843
effective search space: 85515867356
effective search space used: 85515867356
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)