Query 003465
Match_columns 818
No_of_seqs 922 out of 5642
Neff 9.6
Searched_HMMs 46136
Date Thu Mar 28 23:56:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003465.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003465hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3.8E-80 8.3E-85 760.5 56.8 744 39-810 29-954 (968)
2 PLN00113 leucine-rich repeat r 100.0 8.6E-52 1.9E-56 509.2 36.2 463 101-565 69-585 (968)
3 KOG4194 Membrane glycoprotein 100.0 3.4E-38 7.3E-43 328.3 5.2 323 128-451 81-406 (873)
4 KOG4194 Membrane glycoprotein 100.0 8.1E-38 1.8E-42 325.4 4.4 358 102-460 79-439 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 3.4E-38 7.5E-43 314.9 -12.7 426 97-547 64-544 (565)
6 KOG0444 Cytoskeletal regulator 100.0 1.5E-35 3.3E-40 310.0 -6.2 344 99-450 5-352 (1255)
7 KOG0472 Leucine-rich repeat pr 100.0 7.4E-37 1.6E-41 305.4 -16.4 390 92-518 83-541 (565)
8 KOG0444 Cytoskeletal regulator 100.0 4.5E-34 9.8E-39 299.0 -5.8 367 76-454 8-379 (1255)
9 KOG0618 Serine/threonine phosp 100.0 2E-32 4.3E-37 300.6 -5.6 397 103-540 47-487 (1081)
10 KOG0618 Serine/threonine phosp 100.0 3.2E-32 7E-37 298.9 -4.6 404 96-539 63-510 (1081)
11 PLN03210 Resistant to P. syrin 99.9 6.8E-25 1.5E-29 270.5 33.5 357 75-448 532-904 (1153)
12 KOG1187 Serine/threonine prote 99.9 6.8E-27 1.5E-31 249.9 11.6 172 635-808 62-353 (361)
13 PLN03210 Resistant to P. syrin 99.9 2.3E-23 5E-28 257.0 27.7 340 118-478 551-904 (1153)
14 KOG4237 Extracellular matrix p 99.9 2.2E-26 4.8E-31 230.5 -5.8 398 102-539 68-498 (498)
15 PRK15387 E3 ubiquitin-protein 99.9 7.1E-21 1.5E-25 217.7 18.2 265 126-458 202-466 (788)
16 KOG4237 Extracellular matrix p 99.9 1.6E-23 3.4E-28 210.3 -3.9 273 77-353 69-358 (498)
17 PRK15387 E3 ubiquitin-protein 99.8 1.2E-20 2.7E-25 215.7 17.9 265 101-433 201-465 (788)
18 PRK15370 E3 ubiquitin-protein 99.8 1.2E-19 2.6E-24 209.3 11.7 247 125-402 178-428 (754)
19 PRK15370 E3 ubiquitin-protein 99.8 1.6E-19 3.4E-24 208.3 11.5 265 101-403 178-446 (754)
20 KOG0196 Tyrosine kinase, EPH ( 99.8 5.2E-19 1.1E-23 191.8 7.5 176 632-807 604-891 (996)
21 cd00116 LRR_RI Leucine-rich re 99.7 1.1E-19 2.3E-24 195.4 -4.8 275 106-400 3-318 (319)
22 cd00116 LRR_RI Leucine-rich re 99.7 1.3E-19 2.9E-24 194.6 -4.2 282 130-449 3-319 (319)
23 KOG0617 Ras suppressor protein 99.7 5.3E-19 1.1E-23 157.8 -5.4 155 123-282 31-186 (264)
24 KOG0617 Ras suppressor protein 99.7 8.3E-19 1.8E-23 156.5 -5.5 166 97-268 29-195 (264)
25 KOG3653 Transforming growth fa 99.6 3.2E-15 7E-20 154.5 13.0 117 694-810 344-506 (534)
26 KOG0192 Tyrosine kinase specif 99.6 1.4E-15 3.1E-20 161.6 9.2 111 694-807 171-303 (362)
27 KOG0197 Tyrosine kinases [Sign 99.6 8.1E-16 1.8E-20 162.7 5.7 151 658-809 220-463 (468)
28 KOG1026 Nerve growth factor re 99.5 2.2E-15 4.8E-20 167.4 3.2 116 694-809 631-764 (774)
29 KOG0581 Mitogen-activated prot 99.5 8.3E-15 1.8E-19 148.1 6.0 107 694-802 207-334 (364)
30 KOG0591 NIMA (never in mitosis 99.5 1.4E-14 3E-19 140.1 4.3 111 694-804 156-282 (375)
31 KOG0193 Serine/threonine prote 99.5 7.2E-14 1.6E-18 148.9 8.2 164 637-809 388-655 (678)
32 KOG1094 Discoidin domain recep 99.5 2.7E-13 5.9E-18 143.3 11.8 150 658-807 552-804 (807)
33 KOG0575 Polo-like serine/threo 99.5 4.7E-14 1E-18 151.1 5.7 108 694-802 146-268 (592)
34 KOG4278 Protein tyrosine kinas 99.4 3.7E-14 8E-19 150.2 3.7 152 652-807 271-523 (1157)
35 KOG2052 Activin A type IB rece 99.4 4.4E-13 9.6E-18 137.9 10.5 117 694-810 344-506 (513)
36 PLN03150 hypothetical protein; 99.4 4.6E-13 1E-17 154.6 11.9 108 439-566 420-530 (623)
37 KOG1095 Protein tyrosine kinas 99.4 1E-13 2.2E-18 160.2 4.6 114 694-807 830-961 (1025)
38 KOG1025 Epidermal growth facto 99.4 3.1E-13 6.7E-18 148.1 7.4 114 694-807 826-957 (1177)
39 KOG4257 Focal adhesion tyrosin 99.4 4.4E-13 9.5E-18 142.6 7.5 116 694-809 519-651 (974)
40 PLN03150 hypothetical protein; 99.4 9.5E-13 2.1E-17 152.1 10.1 150 36-209 369-527 (623)
41 KOG0578 p21-activated serine/t 99.4 8E-13 1.7E-17 140.6 7.3 104 694-802 397-522 (550)
42 KOG0201 Serine/threonine prote 99.3 1.8E-12 3.8E-17 133.6 7.9 106 694-802 139-262 (467)
43 PHA02988 hypothetical protein; 99.3 1.3E-12 2.9E-17 137.4 6.5 112 694-808 151-280 (283)
44 KOG0615 Serine/threonine prote 99.3 1.7E-12 3.7E-17 132.4 6.8 108 694-802 304-436 (475)
45 cd05148 PTKc_Srm_Brk Catalytic 99.3 1.6E-12 3.4E-17 135.2 6.6 114 694-807 132-261 (261)
46 KOG0659 Cdk activating kinase 99.3 2.9E-12 6.3E-17 123.4 6.9 43 694-736 129-171 (318)
47 KOG0582 Ste20-like serine/thre 99.3 3.8E-12 8.1E-17 131.2 7.6 109 694-802 154-292 (516)
48 KOG0694 Serine/threonine prote 99.3 2.6E-12 5.7E-17 139.5 6.2 103 694-797 496-613 (694)
49 KOG0983 Mitogen-activated prot 99.3 4.8E-12 1E-16 122.1 7.1 103 694-802 220-348 (391)
50 KOG0598 Ribosomal protein S6 k 99.3 1E-12 2.3E-17 133.0 1.8 99 694-795 153-269 (357)
51 KOG4721 Serine/threonine prote 99.3 2.6E-12 5.6E-17 135.4 4.4 110 694-807 240-368 (904)
52 KOG0593 Predicted protein kina 99.3 4.6E-12 1E-16 124.1 5.8 43 694-736 129-171 (396)
53 KOG0600 Cdc2-related protein k 99.3 6.7E-12 1.5E-16 131.4 7.2 43 694-736 246-289 (560)
54 PTZ00283 serine/threonine prot 99.3 2.9E-12 6.2E-17 145.1 4.8 110 694-803 171-297 (496)
55 KOG0661 MAPK related serine/th 99.3 3.2E-12 7E-17 132.7 4.5 42 694-736 138-179 (538)
56 cd05068 PTKc_Frk_like Catalyti 99.3 1E-11 2.2E-16 129.2 8.2 110 694-806 131-260 (261)
57 cd05033 PTKc_EphR Catalytic do 99.3 7.5E-12 1.6E-16 130.6 7.1 114 694-807 134-265 (266)
58 KOG0574 STE20-like serine/thre 99.2 1.5E-12 3.4E-17 126.7 1.5 108 694-802 157-282 (502)
59 KOG0599 Phosphorylase kinase g 99.2 1.7E-12 3.6E-17 125.0 1.5 107 694-802 151-282 (411)
60 cd05072 PTKc_Lyn Catalytic dom 99.2 1.1E-11 2.4E-16 128.9 6.9 111 694-807 131-261 (261)
61 cd05048 PTKc_Ror Catalytic Dom 99.2 1.6E-11 3.4E-16 129.5 7.5 114 694-807 152-283 (283)
62 cd05091 PTKc_Ror2 Catalytic do 99.2 1.8E-11 3.8E-16 129.0 7.5 113 694-806 152-282 (283)
63 cd05052 PTKc_Abl Catalytic dom 99.2 1.5E-11 3.3E-16 128.0 6.9 111 694-807 132-262 (263)
64 cd05114 PTKc_Tec_Rlk Catalytic 99.2 2.2E-11 4.9E-16 126.2 7.8 112 694-805 128-256 (256)
65 KOG0597 Serine-threonine prote 99.2 7.3E-12 1.6E-16 132.2 4.0 105 694-801 128-249 (808)
66 COG4886 Leucine-rich repeat (L 99.2 3.1E-11 6.8E-16 133.5 9.0 197 153-382 97-294 (394)
67 PLN00034 mitogen-activated pro 99.2 2.4E-11 5.2E-16 132.3 7.9 110 694-803 196-328 (353)
68 PF07714 Pkinase_Tyr: Protein 99.2 3.8E-12 8.2E-17 132.2 1.2 111 694-804 131-259 (259)
69 cd05096 PTKc_DDR1 Catalytic do 99.2 3.4E-11 7.5E-16 128.3 8.4 113 694-806 166-304 (304)
70 KOG0577 Serine/threonine prote 99.2 3E-11 6.5E-16 128.1 7.4 99 694-802 154-277 (948)
71 COG4886 Leucine-rich repeat (L 99.2 2.6E-11 5.7E-16 134.1 7.3 179 148-334 115-294 (394)
72 cd05108 PTKc_EGFR Catalytic do 99.2 1.9E-11 4.1E-16 131.0 6.0 112 694-808 137-269 (316)
73 KOG0532 Leucine-rich repeat (L 99.2 9.2E-13 2E-17 139.3 -4.3 175 269-452 75-249 (722)
74 KOG0194 Protein tyrosine kinas 99.2 1.5E-11 3.2E-16 132.9 4.7 114 694-807 290-420 (474)
75 KOG0532 Leucine-rich repeat (L 99.2 8.7E-13 1.9E-17 139.5 -4.7 174 100-282 74-247 (722)
76 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.2 2.5E-11 5.3E-16 128.0 6.0 115 694-808 136-284 (284)
77 cd05063 PTKc_EphR_A2 Catalytic 99.2 3.9E-11 8.4E-16 125.3 7.2 111 694-807 135-267 (268)
78 cd08229 STKc_Nek7 Catalytic do 99.2 5.1E-11 1.1E-15 124.3 8.1 114 694-807 134-265 (267)
79 cd05071 PTKc_Src Catalytic dom 99.2 7.8E-11 1.7E-15 122.6 9.4 113 694-806 130-259 (262)
80 cd08224 STKc_Nek6_Nek7 Catalyt 99.2 3.9E-11 8.6E-16 125.1 6.9 115 694-808 134-266 (267)
81 cd05093 PTKc_TrkB Catalytic do 99.2 3.2E-11 7E-16 127.4 6.3 115 694-808 148-280 (288)
82 cd05049 PTKc_Trk Catalytic dom 99.2 5.8E-11 1.2E-15 124.9 8.2 113 694-806 150-280 (280)
83 cd05111 PTK_HER3 Pseudokinase 99.2 4.3E-11 9.3E-16 125.8 7.0 112 694-808 137-269 (279)
84 cd05039 PTKc_Csk_like Catalyti 99.2 4.8E-11 1E-15 123.7 7.2 111 694-807 130-256 (256)
85 cd05085 PTKc_Fer Catalytic dom 99.2 7.2E-11 1.6E-15 121.9 8.5 112 694-805 121-249 (250)
86 cd05094 PTKc_TrkC Catalytic do 99.2 3.6E-11 7.7E-16 127.3 6.2 115 694-808 151-283 (291)
87 cd05070 PTKc_Fyn_Yrk Catalytic 99.1 7.3E-11 1.6E-15 122.6 8.4 113 694-806 130-259 (260)
88 KOG4658 Apoptotic ATPase [Sign 99.1 2.2E-11 4.8E-16 143.4 4.8 108 100-208 544-653 (889)
89 cd06646 STKc_MAP4K5 Catalytic 99.1 6.5E-11 1.4E-15 123.6 7.7 111 694-804 134-266 (267)
90 KOG0199 ACK and related non-re 99.1 4.7E-11 1E-15 129.1 6.5 108 694-804 240-369 (1039)
91 cd08228 STKc_Nek6 Catalytic do 99.1 1E-10 2.2E-15 122.1 9.0 115 694-808 134-266 (267)
92 cd05116 PTKc_Syk Catalytic dom 99.1 5.1E-11 1.1E-15 123.6 6.7 111 694-807 123-255 (257)
93 cd05035 PTKc_Axl_like Catalyti 99.1 6.5E-11 1.4E-15 123.9 7.5 114 694-807 141-272 (273)
94 KOG1006 Mitogen-activated prot 99.1 1.1E-11 2.3E-16 119.3 1.4 105 694-801 196-325 (361)
95 cd05102 PTKc_VEGFR3 Catalytic 99.1 4E-11 8.7E-16 129.9 6.0 115 694-808 202-335 (338)
96 KOG0198 MEKK and related serin 99.1 6.2E-11 1.3E-15 122.4 6.9 109 694-805 145-278 (313)
97 cd05067 PTKc_Lck_Blk Catalytic 99.1 7.5E-11 1.6E-15 122.6 7.4 110 694-806 130-259 (260)
98 cd05064 PTKc_EphR_A10 Catalyti 99.1 4.9E-11 1.1E-15 124.4 6.1 114 694-807 135-265 (266)
99 cd05062 PTKc_IGF-1R Catalytic 99.1 5E-11 1.1E-15 125.2 6.1 113 694-806 147-277 (277)
100 cd05109 PTKc_HER2 Catalytic do 99.1 8.7E-11 1.9E-15 123.5 6.9 114 694-810 137-271 (279)
101 cd06624 STKc_ASK Catalytic dom 99.1 6.1E-11 1.3E-15 123.8 5.7 160 643-802 3-264 (268)
102 cd05058 PTKc_Met_Ron Catalytic 99.1 1.1E-10 2.4E-15 121.4 7.5 114 694-807 126-259 (262)
103 PTZ00267 NIMA-related protein 99.1 6.9E-11 1.5E-15 133.8 6.4 109 694-802 197-322 (478)
104 cd08529 STKc_FA2-like Catalyti 99.1 9.8E-11 2.1E-15 121.3 6.9 110 694-803 129-253 (256)
105 cd05069 PTKc_Yes Catalytic dom 99.1 1.9E-10 4.1E-15 119.5 9.1 113 694-806 130-259 (260)
106 KOG1027 Serine/threonine prote 99.1 3.5E-11 7.5E-16 133.2 3.4 105 694-801 634-765 (903)
107 cd05082 PTKc_Csk Catalytic dom 99.1 1.1E-10 2.5E-15 120.9 7.0 110 694-807 130-256 (256)
108 cd05059 PTKc_Tec_like Catalyti 99.1 1.4E-10 3E-15 120.2 7.5 112 694-805 128-256 (256)
109 cd05075 PTKc_Axl Catalytic dom 99.1 1.5E-10 3.2E-15 121.2 7.5 114 694-807 140-271 (272)
110 cd05053 PTKc_FGFR Catalytic do 99.1 1E-10 2.2E-15 123.9 6.4 114 694-807 160-291 (293)
111 cd05631 STKc_GRK4 Catalytic do 99.1 5.5E-11 1.2E-15 125.4 4.1 108 694-802 130-260 (285)
112 cd05112 PTKc_Itk Catalytic dom 99.1 1.9E-10 4.1E-15 119.2 8.0 112 694-805 128-256 (256)
113 cd06642 STKc_STK25-YSK1 Cataly 99.1 2.2E-10 4.9E-15 120.2 8.6 107 694-803 129-253 (277)
114 cd05113 PTKc_Btk_Bmx Catalytic 99.1 1.2E-10 2.5E-15 120.8 6.3 112 694-805 128-256 (256)
115 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.1 1.4E-10 3E-15 122.3 6.7 115 694-808 135-282 (283)
116 cd05090 PTKc_Ror1 Catalytic do 99.1 2E-10 4.4E-15 120.9 7.8 110 694-806 152-282 (283)
117 cd05061 PTKc_InsR Catalytic do 99.1 1.3E-10 2.8E-15 122.8 6.2 114 694-807 147-278 (288)
118 cd05585 STKc_YPK1_like Catalyt 99.1 5E-11 1.1E-15 127.5 3.1 109 694-803 121-244 (312)
119 KOG0595 Serine/threonine-prote 99.1 5.8E-11 1.3E-15 121.6 3.2 42 694-736 137-184 (429)
120 cd05066 PTKc_EphR_A Catalytic 99.1 1.7E-10 3.6E-15 120.5 6.8 114 694-807 134-266 (267)
121 cd07862 STKc_CDK6 Catalytic do 99.1 1.8E-10 4E-15 121.8 7.1 42 694-736 138-179 (290)
122 cd05043 PTK_Ryk Pseudokinase d 99.1 1.5E-10 3.2E-15 121.8 6.3 114 694-807 145-276 (280)
123 cd05115 PTKc_Zap-70 Catalytic 99.1 1.5E-10 3.3E-15 120.0 6.3 111 694-807 123-255 (257)
124 cd06640 STKc_MST4 Catalytic do 99.1 5.3E-10 1.2E-14 117.4 10.3 110 694-803 129-253 (277)
125 cd06637 STKc_TNIK Catalytic do 99.1 1.5E-10 3.2E-15 121.2 5.9 108 694-802 139-268 (272)
126 cd05084 PTKc_Fes Catalytic dom 99.1 3E-10 6.5E-15 117.4 8.0 110 694-806 122-252 (252)
127 cd07869 STKc_PFTAIRE1 Catalyti 99.1 2.5E-10 5.4E-15 121.6 7.6 43 694-736 131-173 (303)
128 cd05050 PTKc_Musk Catalytic do 99.1 2E-10 4.4E-15 121.3 6.7 113 694-806 158-288 (288)
129 cd05032 PTKc_InsR_like Catalyt 99.1 1.9E-10 4.1E-15 120.7 6.4 113 694-806 147-277 (277)
130 KOG1259 Nischarin, modulator o 99.0 3.6E-11 7.8E-16 117.5 0.7 128 197-330 284-412 (490)
131 cd05571 STKc_PKB Catalytic dom 99.0 9.9E-11 2.1E-15 125.8 4.2 108 694-802 123-250 (323)
132 cd08528 STKc_Nek10 Catalytic d 99.0 3E-10 6.5E-15 118.6 7.8 108 694-805 142-268 (269)
133 KOG1259 Nischarin, modulator o 99.0 3.5E-11 7.5E-16 117.6 0.6 135 313-453 280-415 (490)
134 cd06619 PKc_MKK5 Catalytic dom 99.0 1.6E-10 3.4E-15 121.5 5.6 105 694-803 123-253 (279)
135 cd05060 PTKc_Syk_like Catalyti 99.0 2.4E-10 5.1E-15 118.6 6.8 115 694-808 123-256 (257)
136 cd05034 PTKc_Src_like Catalyti 99.0 1.9E-10 4.1E-15 119.6 6.1 113 694-806 131-260 (261)
137 cd05092 PTKc_TrkA Catalytic do 99.0 2E-10 4.4E-15 120.8 6.4 113 694-806 150-280 (280)
138 cd07848 STKc_CDKL5 Catalytic d 99.0 2.9E-10 6.4E-15 120.0 7.5 43 694-736 128-171 (287)
139 cd05101 PTKc_FGFR2 Catalytic d 99.0 2E-10 4.4E-15 122.3 6.2 115 694-808 165-297 (304)
140 cd05038 PTKc_Jak_rpt2 Catalyti 99.0 2.8E-10 6.1E-15 119.9 7.3 111 694-807 137-283 (284)
141 cd06656 STKc_PAK3 Catalytic do 99.0 5.1E-10 1.1E-14 118.8 9.2 109 694-802 143-268 (297)
142 cd06609 STKc_MST3_like Catalyt 99.0 3.5E-10 7.7E-15 118.5 7.9 107 694-802 126-250 (274)
143 cd05104 PTKc_Kit Catalytic dom 99.0 2.7E-10 5.8E-15 125.0 7.0 110 694-806 242-373 (375)
144 cd05040 PTKc_Ack_like Catalyti 99.0 3.1E-10 6.8E-15 117.6 7.1 112 694-805 125-256 (257)
145 cd05065 PTKc_EphR_B Catalytic 99.0 2.4E-10 5.2E-15 119.4 6.3 114 694-807 134-268 (269)
146 cd05110 PTKc_HER4 Catalytic do 99.0 3.3E-10 7.1E-15 120.7 7.4 111 694-807 137-268 (303)
147 cd05045 PTKc_RET Catalytic dom 99.0 2.3E-10 5E-15 121.0 6.1 111 694-807 155-286 (290)
148 KOG0583 Serine/threonine prote 99.0 2.6E-10 5.6E-15 122.8 6.4 107 694-801 148-273 (370)
149 KOG1909 Ran GTPase-activating 99.0 1.3E-11 2.7E-16 123.8 -3.4 89 289-377 209-310 (382)
150 cd05106 PTKc_CSF-1R Catalytic 99.0 2.6E-10 5.6E-15 125.0 6.4 111 694-807 240-372 (374)
151 cd06645 STKc_MAP4K3 Catalytic 99.0 4.3E-10 9.4E-15 117.3 7.9 109 694-802 134-264 (267)
152 KOG4658 Apoptotic ATPase [Sign 99.0 9.9E-11 2.1E-15 138.0 3.3 132 98-232 520-653 (889)
153 cd05056 PTKc_FAK Catalytic dom 99.0 3.1E-10 6.7E-15 118.7 6.7 115 694-808 135-266 (270)
154 cd06612 STKc_MST1_2 Catalytic 99.0 4.5E-10 9.8E-15 116.3 7.7 108 694-802 127-252 (256)
155 cd07846 STKc_CDKL2_3 Catalytic 99.0 4.2E-10 9E-15 118.7 7.5 43 694-736 128-170 (286)
156 cd06649 PKc_MEK2 Catalytic dom 99.0 4.7E-10 1E-14 121.0 8.1 41 694-736 132-172 (331)
157 cd05054 PTKc_VEGFR Catalytic d 99.0 2.8E-10 6E-15 123.0 6.3 114 694-807 201-333 (337)
158 cd07853 STKc_NLK Catalytic dom 99.0 4.7E-10 1E-14 123.2 8.2 43 694-736 131-174 (372)
159 cd06654 STKc_PAK1 Catalytic do 99.0 2.8E-10 6E-15 120.8 6.2 110 694-803 144-270 (296)
160 KOG3207 Beta-tubulin folding c 99.0 3.6E-11 7.9E-16 123.8 -0.6 210 122-355 118-340 (505)
161 cd07871 STKc_PCTAIRE3 Catalyti 99.0 5.5E-10 1.2E-14 118.0 8.4 43 694-736 131-173 (288)
162 cd05041 PTKc_Fes_like Catalyti 99.0 4.2E-10 9.1E-15 116.2 7.3 110 694-806 121-251 (251)
163 cd05593 STKc_PKB_gamma Catalyt 99.0 1.8E-10 3.8E-15 124.1 4.6 109 694-803 123-251 (328)
164 cd05097 PTKc_DDR_like Catalyti 99.0 5.4E-10 1.2E-14 118.5 8.3 113 694-806 157-295 (295)
165 cd08223 STKc_Nek4 Catalytic do 99.0 4.5E-10 9.7E-15 116.4 7.3 109 694-802 130-253 (257)
166 cd00192 PTKc Catalytic domain 99.0 5.2E-10 1.1E-14 116.1 7.6 112 694-805 133-262 (262)
167 cd05590 STKc_nPKC_eta Catalyti 99.0 1.8E-10 3.9E-15 123.6 4.3 103 694-797 124-241 (320)
168 cd06655 STKc_PAK2 Catalytic do 99.0 3.5E-10 7.6E-15 120.0 6.3 108 694-802 143-268 (296)
169 cd05051 PTKc_DDR Catalytic dom 99.0 7.3E-10 1.6E-14 117.6 8.7 113 694-806 158-296 (296)
170 KOG0596 Dual specificity; seri 99.0 2E-10 4.4E-15 121.5 4.3 106 694-802 488-626 (677)
171 cd07859 STKc_TDY_MAPK_plant Ca 99.0 4.6E-10 1E-14 121.6 7.2 43 694-736 131-176 (338)
172 cd08218 STKc_Nek1 Catalytic do 99.0 2.2E-10 4.7E-15 118.7 4.5 109 694-802 129-252 (256)
173 cd08219 STKc_Nek3 Catalytic do 99.0 4.8E-10 1E-14 116.1 7.0 110 694-803 128-252 (255)
174 cd07860 STKc_CDK2_3 Catalytic 99.0 6.8E-10 1.5E-14 117.0 8.1 43 694-736 128-170 (284)
175 cd06638 STKc_myosinIIIA Cataly 99.0 3.8E-10 8.2E-15 119.1 6.2 109 694-803 152-283 (286)
176 cd05073 PTKc_Hck Catalytic dom 99.0 5.9E-10 1.3E-14 115.8 7.5 110 694-806 130-259 (260)
177 cd05036 PTKc_ALK_LTK Catalytic 99.0 4.9E-10 1.1E-14 117.6 6.8 113 694-806 144-277 (277)
178 cd05079 PTKc_Jak1_rpt2 Catalyt 99.0 5.8E-10 1.3E-14 117.6 7.3 114 694-807 137-283 (284)
179 cd07874 STKc_JNK3 Catalytic do 99.0 6.6E-10 1.4E-14 121.2 7.7 42 694-736 147-188 (355)
180 cd05587 STKc_cPKC Catalytic do 99.0 2.4E-10 5.1E-15 123.0 4.0 43 694-736 129-171 (324)
181 cd05575 STKc_SGK Catalytic dom 99.0 1.7E-10 3.6E-15 124.1 2.8 104 694-798 124-242 (323)
182 KOG1909 Ran GTPase-activating 99.0 3.1E-11 6.8E-16 121.0 -2.5 89 361-449 209-310 (382)
183 cd05592 STKc_nPKC_theta_delta 99.0 3.1E-10 6.7E-15 121.5 4.9 43 694-736 124-166 (316)
184 cd07878 STKc_p38beta_MAPK11 Ca 99.0 1.1E-09 2.4E-14 118.9 9.2 40 694-736 146-185 (343)
185 cd05089 PTKc_Tie1 Catalytic do 99.0 5.1E-10 1.1E-14 118.8 6.0 113 694-807 147-275 (297)
186 cd05595 STKc_PKB_beta Catalyti 99.0 3.1E-10 6.8E-15 121.9 4.4 108 694-802 123-250 (323)
187 cd06650 PKc_MEK1 Catalytic dom 99.0 8.5E-10 1.8E-14 119.1 7.8 41 694-736 132-172 (333)
188 cd05083 PTKc_Chk Catalytic dom 99.0 6.7E-10 1.4E-14 115.0 6.7 107 694-806 128-253 (254)
189 cd05600 STKc_Sid2p_Dbf2p Catal 99.0 4.6E-10 1E-14 121.3 5.7 107 694-803 129-257 (333)
190 cd05616 STKc_cPKC_beta Catalyt 99.0 2.6E-10 5.5E-15 122.7 3.7 103 694-797 129-246 (323)
191 cd05584 STKc_p70S6K Catalytic 99.0 3.7E-10 8.1E-15 121.3 4.9 108 694-802 128-255 (323)
192 cd05074 PTKc_Tyro3 Catalytic d 99.0 7.2E-10 1.6E-14 116.0 7.0 114 694-807 141-272 (273)
193 cd06659 STKc_PAK6 Catalytic do 99.0 8.4E-10 1.8E-14 117.1 7.5 109 694-803 145-271 (297)
194 cd05591 STKc_nPKC_epsilon Cata 99.0 3E-10 6.4E-15 122.1 3.8 43 694-736 124-166 (321)
195 cd05055 PTKc_PDGFR Catalytic d 99.0 8.5E-10 1.8E-14 117.4 7.2 111 694-807 169-301 (302)
196 cd07861 STKc_CDK1_euk Catalyti 99.0 9.8E-10 2.1E-14 115.9 7.6 43 694-736 129-171 (285)
197 cd05589 STKc_PKN Catalytic dom 99.0 3.5E-10 7.6E-15 121.6 4.2 103 694-797 129-246 (324)
198 cd05604 STKc_SGK3 Catalytic do 99.0 2.3E-10 5E-15 123.1 2.5 110 694-804 124-248 (325)
199 KOG0588 Serine/threonine prote 99.0 4E-10 8.7E-15 121.9 4.2 109 694-804 140-264 (786)
200 KOG3207 Beta-tubulin folding c 99.0 1E-10 2.2E-15 120.5 -0.3 112 267-378 170-284 (505)
201 KOG0663 Protein kinase PITSLRE 99.0 5.8E-10 1.3E-14 111.1 4.9 55 694-748 205-264 (419)
202 cd06651 STKc_MEKK3 Catalytic d 99.0 9.2E-10 2E-14 114.8 6.9 43 694-736 134-179 (266)
203 cd07876 STKc_JNK2 Catalytic do 99.0 1.1E-09 2.4E-14 119.7 7.7 42 694-736 151-192 (359)
204 smart00219 TyrKc Tyrosine kina 99.0 1.1E-09 2.4E-14 113.4 7.4 111 694-804 131-258 (258)
205 cd08217 STKc_Nek2 Catalytic do 99.0 9.5E-10 2.1E-14 114.4 6.8 110 694-803 138-262 (265)
206 KOG0592 3-phosphoinositide-dep 99.0 2.6E-10 5.7E-15 120.6 2.6 102 694-802 202-337 (604)
207 KOG0585 Ca2+/calmodulin-depend 98.9 5.6E-10 1.2E-14 116.2 4.8 111 694-807 238-376 (576)
208 cd05098 PTKc_FGFR1 Catalytic d 98.9 7E-10 1.5E-14 118.4 5.8 115 694-808 168-300 (307)
209 cd06641 STKc_MST3 Catalytic do 98.9 1.4E-09 3E-14 114.2 7.8 110 694-803 129-253 (277)
210 cd06639 STKc_myosinIIIB Cataly 98.9 8.3E-10 1.8E-14 116.8 6.1 109 694-802 156-286 (291)
211 KOG0986 G protein-coupled rece 98.9 8.8E-11 1.9E-15 121.2 -1.3 42 694-736 315-356 (591)
212 KOG0580 Serine/threonine prote 98.9 5.7E-10 1.2E-14 106.3 4.2 103 694-803 152-273 (281)
213 cd07835 STKc_CDK1_like Catalyt 98.9 1.6E-09 3.4E-14 114.1 8.1 43 694-736 127-169 (283)
214 cd06658 STKc_PAK5 Catalytic do 98.9 8.1E-10 1.8E-14 116.9 5.9 109 694-803 146-272 (292)
215 cd05057 PTKc_EGFR_like Catalyt 98.9 9.9E-10 2.1E-14 115.5 6.4 114 694-807 137-268 (279)
216 cd07872 STKc_PCTAIRE2 Catalyti 98.9 1.5E-09 3.3E-14 115.9 7.8 43 694-736 132-174 (309)
217 cd05615 STKc_cPKC_alpha Cataly 98.9 4E-10 8.7E-15 121.1 3.4 103 694-797 129-246 (323)
218 KOG0611 Predicted serine/threo 98.9 3.4E-10 7.3E-15 115.0 2.6 107 694-803 181-303 (668)
219 cd05618 STKc_aPKC_iota Catalyt 98.9 6.4E-10 1.4E-14 119.8 5.0 43 694-736 124-166 (329)
220 PRK13184 pknD serine/threonine 98.9 1.1E-09 2.5E-14 128.0 7.3 114 694-807 141-290 (932)
221 cd06917 STKc_NAK1_like Catalyt 98.9 2.6E-09 5.5E-14 112.2 9.3 109 694-802 129-254 (277)
222 cd05570 STKc_PKC Catalytic dom 98.9 6.3E-10 1.4E-14 119.3 4.7 108 694-802 124-251 (318)
223 cd05612 STKc_PRKX_like Catalyt 98.9 4.9E-10 1.1E-14 118.6 3.7 105 694-802 129-253 (291)
224 cd08221 STKc_Nek9 Catalytic do 98.9 1.3E-09 2.9E-14 112.8 6.9 111 694-804 129-254 (256)
225 PTZ00263 protein kinase A cata 98.9 3.4E-10 7.3E-15 122.0 2.5 40 694-736 146-185 (329)
226 cd07839 STKc_CDK5 Catalytic do 98.9 1.6E-09 3.5E-14 114.1 7.6 43 694-736 127-169 (284)
227 KOG0579 Ste20-like serine/thre 98.9 4.1E-10 8.9E-15 120.3 3.0 104 694-802 158-288 (1187)
228 cd05594 STKc_PKB_alpha Catalyt 98.9 6.2E-10 1.3E-14 119.8 4.3 108 694-802 124-251 (325)
229 cd05620 STKc_nPKC_delta Cataly 98.9 6.9E-10 1.5E-14 118.9 4.5 43 694-736 124-166 (316)
230 cd05088 PTKc_Tie2 Catalytic do 98.9 1.2E-09 2.6E-14 116.3 6.3 113 694-807 152-280 (303)
231 cd06613 STKc_MAP4K3_like Catal 98.9 1.6E-09 3.5E-14 112.6 6.9 109 694-802 129-259 (262)
232 PTZ00284 protein kinase; Provi 98.9 1.1E-09 2.3E-14 124.1 6.0 40 694-736 260-315 (467)
233 cd07833 STKc_CDKL Catalytic do 98.9 1.3E-09 2.9E-14 115.0 6.4 43 694-736 128-171 (288)
234 KOG0594 Protein kinase PCTAIRE 98.9 1.9E-09 4E-14 109.6 7.0 43 694-736 148-190 (323)
235 KOG0658 Glycogen synthase kina 98.9 1.8E-09 3.9E-14 109.6 6.9 42 694-736 153-195 (364)
236 cd06643 STKc_SLK Catalytic dom 98.9 2.1E-09 4.4E-14 113.2 7.7 110 694-803 131-262 (282)
237 KOG0200 Fibroblast/platelet-de 98.9 1.6E-09 3.4E-14 125.3 7.3 113 694-807 446-579 (609)
238 cd05095 PTKc_DDR2 Catalytic do 98.9 2.1E-09 4.5E-14 114.1 7.6 113 694-806 158-296 (296)
239 cd07879 STKc_p38delta_MAPK13 C 98.9 2.2E-09 4.7E-14 116.4 7.9 40 694-736 145-184 (342)
240 cd05100 PTKc_FGFR3 Catalytic d 98.9 1.6E-09 3.5E-14 117.0 6.9 115 694-808 162-294 (334)
241 cd05602 STKc_SGK1 Catalytic do 98.9 4.2E-10 9.2E-15 121.1 2.3 109 694-803 124-247 (325)
242 PHA02882 putative serine/threo 98.9 1.4E-09 2.9E-14 115.3 6.1 110 694-805 154-294 (294)
243 cd05099 PTKc_FGFR4 Catalytic d 98.9 1.4E-09 3E-14 116.5 6.1 115 694-808 162-294 (314)
244 cd07875 STKc_JNK1 Catalytic do 98.9 1.9E-09 4E-14 118.1 7.3 42 694-736 154-195 (364)
245 cd05047 PTKc_Tie Catalytic dom 98.9 1.5E-09 3.3E-14 113.4 6.3 113 694-807 140-268 (270)
246 cd06644 STKc_STK10_LOK Catalyt 98.9 3E-09 6.5E-14 112.6 8.6 109 694-802 138-268 (292)
247 cd06620 PKc_MAPKK_Byr1_like Ca 98.9 1.2E-09 2.7E-14 115.0 5.6 112 694-807 132-270 (284)
248 cd06636 STKc_MAP4K4_6 Catalyti 98.9 1.6E-09 3.5E-14 114.0 6.5 107 694-802 149-278 (282)
249 cd07870 STKc_PFTAIRE2 Catalyti 98.9 2.4E-09 5.2E-14 113.3 7.7 43 694-736 131-173 (291)
250 PF14580 LRR_9: Leucine-rich r 98.9 4.4E-10 9.4E-15 106.3 1.7 14 149-162 42-55 (175)
251 cd05586 STKc_Sck1_like Catalyt 98.9 6E-10 1.3E-14 120.2 3.1 43 694-736 124-166 (330)
252 KOG0531 Protein phosphatase 1, 98.9 1.9E-10 4.2E-15 127.3 -0.9 245 123-381 70-321 (414)
253 cd05103 PTKc_VEGFR2 Catalytic 98.9 2.1E-09 4.5E-14 116.6 7.2 112 694-808 207-340 (343)
254 cd05619 STKc_nPKC_theta Cataly 98.9 1.1E-09 2.4E-14 117.3 4.9 107 694-801 124-246 (316)
255 cd05603 STKc_SGK2 Catalytic do 98.9 6.2E-10 1.3E-14 119.6 3.0 104 694-798 124-242 (321)
256 cd07847 STKc_CDKL1_4 Catalytic 98.9 2.7E-09 5.9E-14 112.5 7.7 43 694-736 128-170 (286)
257 PHA03209 serine/threonine kina 98.9 1.9E-09 4.1E-14 117.5 6.6 42 694-736 185-226 (357)
258 cd05573 STKc_ROCK_NDR_like Cat 98.9 1.5E-09 3.2E-14 118.3 5.6 43 694-736 129-200 (350)
259 PHA03212 serine/threonine kina 98.9 1.8E-09 3.8E-14 118.9 6.2 43 694-736 210-253 (391)
260 cd05608 STKc_GRK1 Catalytic do 98.9 1.6E-09 3.5E-14 113.8 5.7 108 694-802 125-256 (280)
261 cd06611 STKc_SLK_like Catalyti 98.9 3.5E-09 7.6E-14 111.3 8.2 110 694-803 131-262 (280)
262 cd07837 STKc_CdkB_plant Cataly 98.9 2.7E-09 5.8E-14 113.1 7.2 43 694-736 138-181 (295)
263 cd06648 STKc_PAK_II Catalytic 98.9 1.7E-09 3.6E-14 114.1 5.6 108 694-802 143-268 (285)
264 PLN00009 cyclin-dependent kina 98.9 3.1E-09 6.6E-14 112.7 7.6 43 694-736 130-173 (294)
265 KOG0589 Serine/threonine prote 98.9 1.1E-09 2.3E-14 116.3 4.0 110 694-803 134-258 (426)
266 cd07873 STKc_PCTAIRE1 Catalyti 98.9 3.3E-09 7.2E-14 112.8 7.9 43 694-736 132-174 (301)
267 cd06657 STKc_PAK4 Catalytic do 98.9 2.3E-09 5E-14 113.4 6.5 108 694-802 144-269 (292)
268 cd06625 STKc_MEKK3_like Cataly 98.9 2.5E-09 5.4E-14 111.3 6.7 110 694-803 132-260 (263)
269 cd07863 STKc_CDK4 Catalytic do 98.9 3.2E-09 6.9E-14 112.2 7.5 42 694-736 136-177 (288)
270 cd07841 STKc_CDK7 Catalytic do 98.9 4.5E-09 9.9E-14 111.6 8.7 43 694-736 130-172 (298)
271 cd05614 STKc_MSK2_N N-terminal 98.9 1.3E-09 2.8E-14 117.7 4.5 43 694-736 133-176 (332)
272 KOG0531 Protein phosphatase 1, 98.9 2.4E-10 5.2E-15 126.5 -1.3 246 171-454 70-322 (414)
273 cd07849 STKc_ERK1_2_like Catal 98.9 3E-09 6.5E-14 115.1 7.1 43 694-736 134-179 (336)
274 PF14580 LRR_9: Leucine-rich r 98.9 1.6E-09 3.5E-14 102.5 4.3 105 246-354 20-126 (175)
275 cd07844 STKc_PCTAIRE_like Cata 98.9 3.7E-09 8E-14 111.9 7.5 43 694-736 131-173 (291)
276 KOG0660 Mitogen-activated prot 98.9 3.2E-09 6.9E-14 107.6 6.5 55 694-748 153-214 (359)
277 cd06607 STKc_TAO Catalytic dom 98.9 4.4E-09 9.5E-14 112.2 8.1 106 694-803 143-267 (307)
278 cd05105 PTKc_PDGFR_alpha Catal 98.9 2.6E-09 5.7E-14 117.7 6.5 114 694-807 265-397 (400)
279 cd05588 STKc_aPKC Catalytic do 98.9 1.6E-09 3.4E-14 116.8 4.6 43 694-736 124-166 (329)
280 cd05601 STKc_CRIK Catalytic do 98.9 2.8E-09 6.1E-14 115.0 6.5 43 694-736 130-173 (330)
281 cd05582 STKc_RSK_N N-terminal 98.9 8.6E-10 1.9E-14 118.3 2.4 105 694-799 126-245 (318)
282 cd08225 STKc_Nek5 Catalytic do 98.9 2.4E-09 5.2E-14 110.9 5.7 110 694-803 129-254 (257)
283 cd06632 STKc_MEKK1_plant Catal 98.9 3.2E-09 6.9E-14 110.0 6.6 108 694-802 130-254 (258)
284 cd05077 PTK_Jak1_rpt1 Pseudoki 98.9 4.3E-09 9.3E-14 109.5 7.4 106 694-805 133-262 (262)
285 cd08220 STKc_Nek8 Catalytic do 98.9 3.4E-09 7.4E-14 109.7 6.6 108 694-802 129-252 (256)
286 cd07843 STKc_CDC2L1 Catalytic 98.8 5.4E-09 1.2E-13 110.7 8.2 43 694-736 134-176 (293)
287 cd06647 STKc_PAK_I Catalytic d 98.8 5.8E-09 1.3E-13 110.4 8.4 110 694-803 143-269 (293)
288 KOG1035 eIF-2alpha kinase GCN2 98.8 3.4E-09 7.4E-14 122.2 6.7 108 694-802 725-870 (1351)
289 cd06616 PKc_MKK4 Catalytic dom 98.8 4.1E-09 8.8E-14 111.3 6.9 106 694-803 136-267 (288)
290 cd06623 PKc_MAPKK_plant_like C 98.8 4.3E-09 9.3E-14 109.5 7.0 110 694-803 128-256 (264)
291 cd07845 STKc_CDK10 Catalytic d 98.8 5.9E-09 1.3E-13 111.4 8.0 43 694-736 136-178 (309)
292 PTZ00036 glycogen synthase kin 98.8 4.1E-09 9E-14 117.9 7.0 42 694-736 198-240 (440)
293 PHA03211 serine/threonine kina 98.8 5.2E-09 1.1E-13 116.8 7.7 43 694-736 288-332 (461)
294 cd06628 STKc_MAPKKK_Byr2_like 98.8 5E-09 1.1E-13 109.2 7.2 106 694-802 134-263 (267)
295 cd05605 STKc_GRK4_like Catalyt 98.8 2.1E-09 4.6E-14 113.3 4.3 108 694-802 130-260 (285)
296 cd07864 STKc_CDK12 Catalytic d 98.8 7.9E-09 1.7E-13 110.0 8.7 43 694-736 144-187 (302)
297 cd05107 PTKc_PDGFR_beta Cataly 98.8 4.7E-09 1E-13 115.6 7.1 111 694-807 267-399 (401)
298 cd05596 STKc_ROCK Catalytic do 98.8 2.8E-09 6.1E-14 116.7 5.2 43 694-736 170-213 (370)
299 PTZ00426 cAMP-dependent protei 98.8 1.6E-09 3.5E-14 117.0 3.3 40 694-736 159-198 (340)
300 cd06631 STKc_YSK4 Catalytic do 98.8 4.9E-09 1.1E-13 109.2 6.8 106 694-802 130-261 (265)
301 cd05122 PKc_STE Catalytic doma 98.8 3.7E-09 8.1E-14 108.9 5.8 107 694-802 126-250 (253)
302 cd05087 PTKc_Aatyk1_Aatyk3 Cat 98.8 9.7E-09 2.1E-13 107.3 8.8 43 694-736 128-172 (269)
303 cd07868 STKc_CDK8 Catalytic do 98.8 4.4E-09 9.6E-14 112.8 6.3 43 694-736 136-185 (317)
304 cd07852 STKc_MAPK15 Catalytic 98.8 8.3E-09 1.8E-13 111.7 8.4 43 694-736 135-182 (337)
305 cd06608 STKc_myosinIII_like Ca 98.8 6.7E-09 1.5E-13 108.7 7.4 109 694-802 141-271 (275)
306 PLN03225 Serine/threonine-prot 98.8 3.9E-09 8.5E-14 120.8 6.0 43 694-736 283-327 (566)
307 KOG4279 Serine/threonine prote 98.8 4.8E-09 1.1E-13 113.6 6.2 109 694-802 703-831 (1226)
308 cd05044 PTKc_c-ros Catalytic d 98.8 5.4E-09 1.2E-13 109.1 6.4 110 694-806 134-269 (269)
309 cd06627 STKc_Cdc7_like Catalyt 98.8 4.6E-09 1E-13 108.5 5.8 108 694-802 127-250 (254)
310 cd08215 STKc_Nek Catalytic dom 98.8 4.9E-09 1.1E-13 108.5 6.0 109 694-802 131-254 (258)
311 cd05632 STKc_GRK5 Catalytic do 98.8 3E-09 6.5E-14 112.2 4.4 42 694-736 130-171 (285)
312 cd06617 PKc_MKK3_6 Catalytic d 98.8 6.8E-09 1.5E-13 109.3 7.0 108 694-802 132-260 (283)
313 cd06605 PKc_MAPKK Catalytic do 98.8 4.5E-09 9.9E-14 109.4 5.6 107 694-802 129-256 (265)
314 cd06635 STKc_TAO1 Catalytic do 98.8 7.7E-09 1.7E-13 110.9 7.4 106 694-806 153-280 (317)
315 KOG0616 cAMP-dependent protein 98.8 2E-09 4.4E-14 105.7 2.6 51 694-747 172-226 (355)
316 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.8 3.4E-09 7.3E-14 110.0 4.4 103 694-805 128-258 (258)
317 cd05617 STKc_aPKC_zeta Catalyt 98.8 3.5E-09 7.5E-14 114.0 4.6 43 694-736 124-166 (327)
318 cd07842 STKc_CDK8_like Catalyt 98.8 4.6E-09 1E-13 112.5 5.5 43 694-736 136-185 (316)
319 cd07840 STKc_CDK9_like Catalyt 98.8 9.6E-09 2.1E-13 108.3 7.8 43 694-736 128-171 (287)
320 cd06615 PKc_MEK Catalytic doma 98.8 1.6E-08 3.4E-13 108.0 9.4 41 694-736 128-168 (308)
321 cd07867 STKc_CDC2L6 Catalytic 98.8 6.7E-09 1.4E-13 111.4 6.5 43 694-736 136-185 (317)
322 cd05621 STKc_ROCK2 Catalytic d 98.8 4.5E-09 9.8E-14 114.9 5.3 43 694-736 170-213 (370)
323 cd06629 STKc_MAPKKK_Bck1_like 98.8 6.4E-09 1.4E-13 108.8 6.1 110 694-803 136-269 (272)
324 cd07850 STKc_JNK Catalytic dom 98.8 1.3E-08 2.8E-13 110.9 8.7 42 694-736 146-187 (353)
325 cd06618 PKc_MKK7 Catalytic dom 98.8 8.6E-09 1.9E-13 109.3 7.1 107 694-803 143-273 (296)
326 cd05607 STKc_GRK7 Catalytic do 98.8 5.8E-09 1.3E-13 109.4 5.5 112 694-806 123-253 (277)
327 cd07836 STKc_Pho85 Catalytic d 98.8 1.1E-08 2.4E-13 107.7 7.5 43 694-736 128-170 (284)
328 cd08530 STKc_CNK2-like Catalyt 98.8 1.1E-08 2.3E-13 105.9 7.1 107 694-802 131-252 (256)
329 cd07858 STKc_TEY_MAPK_plant Ca 98.8 3.7E-09 7.9E-14 114.4 3.8 43 694-736 136-178 (337)
330 cd06614 STKc_PAK Catalytic dom 98.8 1.2E-08 2.6E-13 107.6 7.6 107 694-802 144-269 (286)
331 cd06610 STKc_OSR1_SPAK Catalyt 98.8 1E-08 2.2E-13 106.8 6.9 109 694-802 130-263 (267)
332 PF00069 Pkinase: Protein kina 98.8 3.1E-09 6.7E-14 110.2 2.9 109 694-802 126-256 (260)
333 cd05037 PTK_Jak_rpt1 Pseudokin 98.8 1.1E-08 2.4E-13 106.1 7.0 106 694-805 129-259 (259)
334 cd07838 STKc_CDK4_6_like Catal 98.8 9.4E-09 2E-13 108.4 6.6 42 694-736 135-176 (287)
335 cd06626 STKc_MEKK4 Catalytic d 98.8 1.2E-08 2.6E-13 106.1 7.3 108 694-802 127-260 (264)
336 cd05118 STKc_CMGC Catalytic do 98.8 1.8E-08 3.9E-13 106.0 8.6 43 694-736 126-168 (283)
337 cd06622 PKc_MAPKK_PBS2_like Ca 98.8 1.5E-08 3.2E-13 107.0 7.6 108 694-803 131-262 (286)
338 cd05628 STKc_NDR1 Catalytic do 98.8 6.5E-09 1.4E-13 113.7 5.1 23 694-716 129-151 (363)
339 cd06652 STKc_MEKK2 Catalytic d 98.8 1.4E-08 3E-13 105.8 7.3 43 694-736 134-179 (265)
340 KOG0032 Ca2+/calmodulin-depend 98.7 9.1E-09 2E-13 110.8 5.9 108 694-803 163-293 (382)
341 smart00220 S_TKc Serine/Threon 98.7 1.6E-08 3.5E-13 103.4 7.4 108 694-802 115-240 (244)
342 cd07855 STKc_ERK5 Catalytic do 98.7 1.4E-08 2.9E-13 109.9 7.1 43 694-736 135-181 (334)
343 cd07830 STKc_MAK_like Catalyti 98.7 2.2E-08 4.8E-13 105.4 8.6 42 694-736 127-168 (283)
344 cd06634 STKc_TAO2 Catalytic do 98.7 1.4E-08 3.1E-13 108.3 6.8 110 694-807 143-271 (308)
345 cd05579 STKc_MAST_like Catalyt 98.7 1.1E-08 2.3E-13 106.4 5.6 112 694-806 121-257 (265)
346 cd07834 STKc_MAPK Catalytic do 98.7 2.3E-08 5E-13 107.9 8.4 43 694-736 131-176 (330)
347 cd05046 PTK_CCK4 Pseudokinase 98.7 1.8E-08 4E-13 105.5 7.2 110 694-806 145-275 (275)
348 cd07865 STKc_CDK9 Catalytic do 98.7 2.1E-08 4.5E-13 107.1 7.8 43 694-736 147-193 (310)
349 KOG0696 Serine/threonine prote 98.7 5.2E-09 1.1E-13 106.8 2.9 56 694-749 478-537 (683)
350 cd05042 PTKc_Aatyk Catalytic d 98.7 2.4E-08 5.3E-13 104.2 8.0 43 694-736 128-172 (269)
351 cd05626 STKc_LATS2 Catalytic d 98.7 1.1E-08 2.5E-13 112.5 5.8 23 694-716 129-151 (381)
352 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.7 1.2E-08 2.6E-13 106.9 5.6 103 694-805 145-274 (274)
353 cd05609 STKc_MAST Catalytic do 98.7 9.6E-09 2.1E-13 109.5 4.9 113 694-806 129-273 (305)
354 KOG4645 MAPKKK (MAP kinase kin 98.7 8E-09 1.7E-13 119.9 4.4 43 694-736 1362-1408(1509)
355 cd05630 STKc_GRK6 Catalytic do 98.7 1.1E-08 2.4E-13 107.8 5.2 42 694-736 130-171 (285)
356 cd07832 STKc_CCRK Catalytic do 98.7 2.7E-08 5.8E-13 104.9 8.0 43 694-736 127-170 (286)
357 cd06621 PKc_MAPKK_Pek1_like Ca 98.7 3.3E-08 7.2E-13 104.3 8.7 106 694-802 133-265 (287)
358 cd07829 STKc_CDK_like Catalyti 98.7 2.8E-08 6.1E-13 104.4 8.2 43 694-736 126-168 (282)
359 cd05086 PTKc_Aatyk2 Catalytic 98.7 3.4E-08 7.4E-13 103.1 8.7 43 694-736 127-171 (268)
360 KOG0605 NDR and related serine 98.7 4.4E-09 9.4E-14 111.7 1.8 34 647-680 140-178 (550)
361 cd07866 STKc_BUR1 Catalytic do 98.7 9.3E-09 2E-13 109.9 4.4 43 694-736 143-196 (311)
362 cd07856 STKc_Sty1_Hog1 Catalyt 98.7 2E-08 4.4E-13 108.1 6.9 40 694-736 136-175 (328)
363 KOG0033 Ca2+/calmodulin-depend 98.7 8.8E-10 1.9E-14 105.0 -3.2 107 694-801 138-265 (355)
364 cd05574 STKc_phototropin_like 98.7 1.6E-08 3.5E-13 108.3 6.1 110 694-806 131-288 (316)
365 cd06606 STKc_MAPKKK Catalytic 98.7 4.4E-08 9.6E-13 101.3 9.1 106 694-802 129-256 (260)
366 KOG4236 Serine/threonine prote 98.7 8.3E-09 1.8E-13 108.4 3.6 54 694-748 692-752 (888)
367 KOG0587 Traf2- and Nck-interac 98.7 1.6E-08 3.5E-13 113.1 6.0 109 694-802 151-281 (953)
368 cd05599 STKc_NDR_like Catalyti 98.7 1.2E-08 2.6E-13 111.8 4.9 24 694-717 129-152 (364)
369 cd07857 STKc_MPK1 Catalytic do 98.7 3.6E-08 7.8E-13 106.4 8.6 43 694-736 133-179 (332)
370 PHA03207 serine/threonine kina 98.7 2.2E-08 4.9E-13 110.6 7.1 43 694-736 213-257 (392)
371 KOG0662 Cyclin-dependent kinas 98.7 2.7E-08 5.8E-13 90.3 5.9 58 694-751 129-191 (292)
372 cd07877 STKc_p38alpha_MAPK14 C 98.7 2.6E-08 5.7E-13 108.1 7.1 96 638-736 7-187 (345)
373 KOG1024 Receptor-like protein 98.7 7.9E-09 1.7E-13 105.0 2.7 113 694-807 424-555 (563)
374 cd07831 STKc_MOK Catalytic dom 98.7 2.9E-08 6.2E-13 104.4 7.0 41 694-736 128-168 (282)
375 PTZ00024 cyclin-dependent prot 98.7 3.8E-08 8.2E-13 106.4 8.0 43 694-736 147-203 (335)
376 KOG1989 ARK protein kinase fam 98.7 5.8E-08 1.3E-12 109.6 9.4 112 694-808 174-312 (738)
377 PF13855 LRR_8: Leucine rich r 98.7 1.8E-08 4E-13 78.2 3.6 59 102-160 2-60 (61)
378 cd06630 STKc_MEKK1 Catalytic d 98.7 4.3E-08 9.3E-13 102.2 7.6 109 694-802 131-263 (268)
379 cd05622 STKc_ROCK1 Catalytic d 98.7 2.5E-08 5.4E-13 109.2 5.9 43 694-736 170-213 (371)
380 cd05583 STKc_MSK_N N-terminal 98.7 1.8E-08 3.9E-13 106.4 4.5 113 694-807 133-267 (288)
381 PF13855 LRR_8: Leucine rich r 98.6 1.4E-08 3E-13 78.8 2.6 61 125-185 1-61 (61)
382 cd07851 STKc_p38 Catalytic dom 98.6 3.3E-08 7.1E-13 107.2 6.3 40 694-736 146-185 (343)
383 cd05580 STKc_PKA Catalytic dom 98.6 2.4E-08 5.3E-13 105.5 4.4 40 694-736 129-168 (290)
384 KOG0690 Serine/threonine prote 98.6 2.4E-08 5.1E-13 99.1 3.5 43 694-736 296-338 (516)
385 PTZ00266 NIMA-related protein 98.6 2.2E-08 4.8E-13 117.9 3.9 112 694-807 153-301 (1021)
386 cd05625 STKc_LATS1 Catalytic d 98.6 2.3E-08 4.9E-13 110.3 3.8 22 694-715 129-150 (382)
387 KOG0586 Serine/threonine prote 98.6 4.5E-08 9.7E-13 105.9 5.8 107 694-802 183-305 (596)
388 cd05627 STKc_NDR2 Catalytic do 98.6 4.4E-08 9.6E-13 107.0 5.5 23 694-716 129-151 (360)
389 cd05629 STKc_NDR_like_fungal C 98.6 4.3E-08 9.4E-13 107.8 5.5 22 694-715 129-150 (377)
390 cd05611 STKc_Rim15_like Cataly 98.6 4.4E-08 9.5E-13 101.7 5.0 108 694-806 125-251 (260)
391 cd07880 STKc_p38gamma_MAPK12 C 98.6 7.4E-08 1.6E-12 104.5 6.8 40 694-736 146-185 (343)
392 cd06633 STKc_TAO3 Catalytic do 98.6 9.1E-08 2E-12 102.3 7.3 103 694-803 149-273 (313)
393 cd05598 STKc_LATS Catalytic do 98.6 5.2E-08 1.1E-12 107.2 5.2 22 694-715 129-150 (376)
394 cd05123 STKc_AGC Catalytic dom 98.6 9.6E-08 2.1E-12 98.4 6.9 105 694-799 121-240 (250)
395 cd05572 STKc_cGK_PKG Catalytic 98.6 1.2E-07 2.7E-12 98.4 7.6 42 694-736 121-162 (262)
396 cd07854 STKc_MAPK4_6 Catalytic 98.6 1E-07 2.3E-12 103.3 7.1 43 694-736 142-188 (342)
397 KOG2345 Serine/threonine prote 98.5 6.1E-08 1.3E-12 93.1 4.5 111 694-807 157-300 (302)
398 cd05578 STKc_Yank1 Catalytic d 98.5 8E-08 1.7E-12 99.6 5.9 107 694-801 128-253 (258)
399 PHA03210 serine/threonine kina 98.5 4.9E-08 1.1E-12 111.1 4.5 43 694-736 295-338 (501)
400 cd08216 PK_STRAD Pseudokinase 98.5 1.7E-07 3.7E-12 100.3 8.4 43 694-736 129-178 (314)
401 cd08222 STKc_Nek11 Catalytic d 98.5 1.4E-07 3.1E-12 97.9 7.5 108 694-802 134-256 (260)
402 cd05581 STKc_PDK1 Catalytic do 98.5 6.6E-08 1.4E-12 101.5 5.0 108 694-802 130-276 (280)
403 cd05633 STKc_GRK3 Catalytic do 98.5 1.1E-07 2.4E-12 99.8 6.7 108 694-803 125-255 (279)
404 cd05613 STKc_MSK1_N N-terminal 98.5 8.8E-08 1.9E-12 101.3 5.9 43 694-736 133-176 (290)
405 cd05623 STKc_MRCK_alpha Cataly 98.5 1.1E-07 2.4E-12 102.6 5.8 43 694-736 130-173 (332)
406 cd05597 STKc_DMPK_like Catalyt 98.5 1.5E-07 3.2E-12 101.6 6.7 43 694-736 130-173 (331)
407 KOG0984 Mitogen-activated prot 98.5 6E-08 1.3E-12 90.5 3.0 42 694-736 177-218 (282)
408 KOG0669 Cyclin T-dependent kin 98.5 2.2E-08 4.9E-13 95.9 0.0 43 694-736 152-198 (376)
409 cd05624 STKc_MRCK_beta Catalyt 98.5 5.1E-08 1.1E-12 105.1 2.7 43 694-736 130-173 (331)
410 cd05606 STKc_beta_ARK Catalyti 98.5 2.3E-07 5.1E-12 97.3 7.2 107 694-802 125-254 (278)
411 cd06653 STKc_MEKK3_like_1 Cata 98.5 2.2E-07 4.7E-12 96.7 6.3 43 694-736 134-179 (264)
412 cd08226 PK_STRAD_beta Pseudoki 98.4 6.3E-07 1.4E-11 96.6 9.2 28 775-802 280-307 (328)
413 cd05577 STKc_GRK Catalytic dom 98.4 4.1E-07 8.9E-12 95.4 7.0 42 694-736 123-164 (277)
414 smart00750 KIND kinase non-cat 98.4 2.4E-07 5.2E-12 89.8 4.8 107 694-807 39-169 (176)
415 cd08227 PK_STRAD_alpha Pseudok 98.4 4.1E-07 8.9E-12 98.0 6.9 43 694-736 129-178 (327)
416 PLN03224 probable serine/threo 98.4 7.1E-07 1.5E-11 99.8 8.4 43 694-736 337-380 (507)
417 KOG0576 Mitogen-activated prot 98.4 2.6E-07 5.6E-12 100.5 4.1 43 694-736 140-182 (829)
418 PHA03390 pk1 serine/threonine- 98.4 8.4E-07 1.8E-11 92.5 8.0 104 694-802 137-261 (267)
419 KOG1859 Leucine-rich repeat pr 98.3 1.3E-08 2.8E-13 111.2 -6.9 179 262-450 102-292 (1096)
420 cd05576 STKc_RPK118_like Catal 98.3 1.1E-06 2.4E-11 89.8 6.8 101 694-800 113-226 (237)
421 KOG0666 Cyclin C-dependent kin 98.3 4.2E-07 9.2E-12 90.1 3.3 54 694-747 160-225 (438)
422 cd00180 PKc Catalytic domain o 98.2 1.8E-06 4E-11 85.7 6.6 89 694-803 120-214 (215)
423 KOG1859 Leucine-rich repeat pr 98.2 1.3E-08 2.9E-13 111.1 -9.4 19 96-114 104-122 (1096)
424 PRK09188 serine/threonine prot 98.2 1.1E-06 2.3E-11 94.1 4.4 43 694-736 140-190 (365)
425 KOG1151 Tousled-like protein k 98.2 5.4E-07 1.2E-11 93.1 1.4 43 694-736 598-650 (775)
426 PLN00181 protein SPA1-RELATED; 98.2 1E-06 2.2E-11 106.4 3.7 26 777-802 239-264 (793)
427 KOG0584 Serine/threonine prote 98.2 9.5E-07 2.1E-11 96.0 3.1 106 694-802 173-295 (632)
428 KOG2982 Uncharacterized conser 98.1 4.2E-07 9.2E-12 89.5 -0.1 62 341-402 199-262 (418)
429 KOG2120 SCF ubiquitin ligase, 98.1 1.5E-08 3.4E-13 99.4 -10.0 176 175-352 187-374 (419)
430 KOG0612 Rho-associated, coiled 98.1 1.3E-06 2.9E-11 100.7 3.1 43 694-736 203-246 (1317)
431 KOG0695 Serine/threonine prote 98.1 8.7E-07 1.9E-11 88.4 1.2 55 694-748 379-437 (593)
432 KOG4717 Serine/threonine prote 98.1 3.9E-06 8.5E-11 88.6 6.1 103 694-802 146-269 (864)
433 COG5238 RNA1 Ran GTPase-activa 98.1 1.7E-07 3.7E-12 91.0 -4.1 138 169-306 88-255 (388)
434 KOG0664 Nemo-like MAPK-related 98.1 6.2E-07 1.4E-11 87.0 -1.0 57 694-750 184-246 (449)
435 KOG0603 Ribosomal protein S6 k 98.0 3.2E-06 6.9E-11 92.4 4.2 104 694-803 443-563 (612)
436 KOG2120 SCF ubiquitin ligase, 98.0 9.8E-08 2.1E-12 93.9 -7.8 156 290-447 207-373 (419)
437 KOG2982 Uncharacterized conser 98.0 1E-06 2.2E-11 86.9 -0.8 63 390-452 200-264 (418)
438 KOG0667 Dual-specificity tyros 98.0 1.4E-05 3.1E-10 87.7 7.2 40 694-736 317-358 (586)
439 KOG0610 Putative serine/threon 97.9 2.5E-05 5.4E-10 81.0 6.7 100 694-796 207-381 (459)
440 cd05610 STKc_MASTL Catalytic d 97.8 1.2E-05 2.5E-10 94.9 4.1 43 694-736 132-174 (669)
441 COG5238 RNA1 Ran GTPase-activa 97.8 5.1E-06 1.1E-10 81.0 0.2 228 242-481 27-286 (388)
442 KOG0195 Integrin-linked kinase 97.8 1.2E-05 2.7E-10 78.2 2.6 105 694-808 319-447 (448)
443 KOG4579 Leucine-rich repeat (L 97.8 5.6E-07 1.2E-11 78.6 -6.0 104 104-210 30-136 (177)
444 KOG0604 MAP kinase-activated p 97.8 1.4E-05 3.1E-10 79.1 2.7 109 694-803 189-322 (400)
445 PRK15386 type III secretion pr 97.7 0.00011 2.5E-09 78.3 9.5 15 100-114 51-65 (426)
446 KOG4250 TANK binding protein k 97.7 1.2E-05 2.6E-10 88.9 1.8 42 694-736 148-193 (732)
447 PRK15386 type III secretion pr 97.7 0.00015 3.2E-09 77.5 9.5 32 389-423 156-187 (426)
448 KOG4579 Leucine-rich repeat (L 97.7 2.2E-06 4.7E-11 75.0 -3.9 93 97-192 49-141 (177)
449 KOG0614 cGMP-dependent protein 97.7 1.9E-05 4.1E-10 83.6 2.1 53 694-747 548-604 (732)
450 KOG1644 U2-associated snRNP A' 97.6 0.00011 2.4E-09 69.1 5.9 103 126-230 43-149 (233)
451 PF12799 LRR_4: Leucine Rich r 97.6 5.8E-05 1.3E-09 53.5 2.9 34 151-185 3-36 (44)
452 KOG0607 MAP kinase-interacting 97.5 5.5E-05 1.2E-09 75.7 3.2 49 638-691 73-126 (463)
453 PF12799 LRR_4: Leucine Rich r 97.5 7E-05 1.5E-09 53.1 2.8 37 414-451 2-38 (44)
454 KOG1644 U2-associated snRNP A' 97.5 0.00021 4.6E-09 67.2 6.1 57 151-209 44-100 (233)
455 KOG0608 Warts/lats-like serine 97.5 3.7E-05 8E-10 83.5 0.8 23 694-716 757-779 (1034)
456 KOG0665 Jun-N-terminal kinase 97.3 0.00024 5.3E-09 71.5 4.6 42 694-736 146-187 (369)
457 KOG3665 ZYG-1-like serine/thre 97.3 0.00011 2.3E-09 85.4 1.6 106 125-232 122-231 (699)
458 PF08263 LRRNT_2: Leucine rich 97.2 0.00036 7.8E-09 49.4 3.6 35 38-72 2-43 (43)
459 KOG2739 Leucine-rich acidic nu 97.1 0.00028 6.1E-09 69.4 2.4 86 123-210 41-129 (260)
460 PF13306 LRR_5: Leucine rich r 97.0 0.0015 3.2E-08 59.3 6.8 106 95-205 6-111 (129)
461 KOG3665 ZYG-1-like serine/thre 97.0 0.00034 7.4E-09 81.2 2.6 134 101-236 122-265 (699)
462 PF13306 LRR_5: Leucine rich r 96.9 0.0019 4E-08 58.7 6.5 105 120-229 7-111 (129)
463 KOG1023 Natriuretic peptide re 96.9 0.0008 1.7E-08 73.9 4.3 114 694-808 77-225 (484)
464 smart00221 STYKc Protein kinas 96.9 0.00099 2.1E-08 66.9 4.5 44 694-737 126-170 (225)
465 KOG0671 LAMMER dual specificit 96.8 0.00067 1.4E-08 70.0 2.8 29 774-802 377-405 (415)
466 cd05610 STKc_MASTL Catalytic d 96.8 0.00083 1.8E-08 79.3 4.0 107 695-803 507-634 (669)
467 cd05147 RIO1_euk RIO kinase fa 96.7 0.0011 2.4E-08 64.8 3.0 22 694-716 146-167 (190)
468 cd05144 RIO2_C RIO kinase fami 96.7 0.0023 4.9E-08 63.2 5.3 24 694-717 153-176 (198)
469 KOG0670 U4/U6-associated splic 96.6 0.0018 3.8E-08 69.4 4.1 87 694-791 564-655 (752)
470 cd05145 RIO1_like RIO kinase f 96.6 0.0021 4.6E-08 62.9 4.2 24 694-718 146-169 (190)
471 KOG4341 F-box protein containi 96.3 8.8E-05 1.9E-09 77.2 -7.6 83 125-207 138-226 (483)
472 KOG0590 Checkpoint kinase and 96.3 0.0032 7E-08 72.4 4.2 109 694-802 448-584 (601)
473 KOG2739 Leucine-rich acidic nu 96.3 0.0029 6.2E-08 62.5 3.0 83 365-451 43-130 (260)
474 TIGR01982 UbiB 2-polyprenylphe 96.3 0.0056 1.2E-07 68.1 5.7 25 694-718 285-309 (437)
475 KOG1152 Signal transduction se 96.1 0.0041 9E-08 67.6 3.1 41 694-736 698-738 (772)
476 KOG2123 Uncharacterized conser 95.9 0.00031 6.7E-09 69.2 -5.5 82 269-354 19-101 (388)
477 KOG2123 Uncharacterized conser 95.9 0.00022 4.8E-09 70.2 -6.7 57 102-162 20-76 (388)
478 KOG4341 F-box protein containi 95.9 0.00019 4.1E-09 74.7 -7.6 83 102-184 139-227 (483)
479 KOG1033 eIF-2alpha kinase PEK/ 95.8 0.004 8.6E-08 67.4 1.5 43 694-736 384-432 (516)
480 KOG1947 Leucine rich repeat pr 95.5 0.00081 1.8E-08 76.6 -5.6 187 123-319 186-389 (482)
481 KOG1345 Serine/threonine kinas 95.3 0.072 1.6E-06 52.9 8.1 40 694-736 149-190 (378)
482 KOG1165 Casein kinase (serine/ 95.2 0.02 4.3E-07 58.4 3.9 43 694-736 152-206 (449)
483 PRK04750 ubiB putative ubiquin 95.1 0.022 4.8E-07 64.4 4.6 25 694-718 288-316 (537)
484 KOG1947 Leucine rich repeat pr 95.1 0.0014 3E-08 74.7 -5.3 10 415-424 403-412 (482)
485 PF00560 LRR_1: Leucine Rich R 94.8 0.0091 2E-07 35.2 0.3 19 507-526 2-20 (22)
486 smart00090 RIO RIO-like kinase 94.7 0.029 6.2E-07 56.9 3.8 23 694-717 177-199 (237)
487 PF00560 LRR_1: Leucine Rich R 94.7 0.013 2.8E-07 34.5 0.8 19 127-146 2-20 (22)
488 PF14531 Kinase-like: Kinase-l 94.4 0.04 8.7E-07 56.8 4.0 40 694-736 173-212 (288)
489 KOG1163 Casein kinase (serine/ 94.4 0.044 9.5E-07 53.4 3.9 43 694-736 139-191 (341)
490 KOG1167 Serine/threonine prote 94.3 0.018 3.9E-07 60.5 1.3 34 646-679 34-75 (418)
491 KOG0603 Ribosomal protein S6 k 94.0 0.015 3.2E-07 64.5 -0.2 39 694-736 125-163 (612)
492 KOG0668 Casein kinase II, alph 93.7 0.051 1.1E-06 52.5 2.9 55 694-749 160-220 (338)
493 KOG4308 LRR-containing protein 93.7 0.00051 1.1E-08 76.4 -12.3 89 364-452 203-305 (478)
494 KOG1164 Casein kinase (serine/ 93.5 0.18 3.9E-06 54.0 7.1 114 694-807 150-297 (322)
495 cd05119 RIO RIO kinase family, 93.5 0.087 1.9E-06 51.2 4.3 23 694-717 143-165 (187)
496 KOG1240 Protein kinase contain 93.3 0.11 2.4E-06 61.4 5.4 29 779-807 267-295 (1431)
497 COG0661 AarF Predicted unusual 93.2 0.099 2.2E-06 58.7 4.7 25 694-718 293-317 (517)
498 KOG0473 Leucine-rich repeat pr 92.1 0.0062 1.3E-07 58.7 -5.6 85 97-184 38-122 (326)
499 KOG4308 LRR-containing protein 92.1 0.0016 3.4E-08 72.5 -11.3 183 102-284 88-305 (478)
500 PRK14879 serine/threonine prot 91.9 0.16 3.4E-06 50.5 3.9 21 694-715 123-143 (211)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.8e-80 Score=760.53 Aligned_cols=744 Identities=30% Similarity=0.427 Sum_probs=453.7
Q ss_pred HHHHHHHcCCC------CCCCCCCCCCCCCCCCccceeeCCCCCEEEEEecC--CccccCCCCCCCcCCCCCCcEEEcCC
Q 003465 39 LEREALLNTGW------WNNSREKASNHSDHCKWAGIVCNLNGSIIRISLSG--VNGIRGKLDQFNFSCFPNLESFRIWY 110 (818)
Q Consensus 39 ~~~~~ll~~~~------~~~~~~~~~~~~~~c~w~gv~c~~~~~v~~l~l~~--~~g~~~~l~~~~l~~l~~L~~L~L~~ 110 (818)
.|++||+.++. ....+|. ...|||.|.||+|+..++|+.|++.+ +.|.+ ++ .|..+++|++|+|++
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~w~--~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~---~~-~~~~l~~L~~L~Ls~ 102 (968)
T PLN00113 29 EELELLLSFKSSINDPLKYLSNWN--SSADVCLWQGITCNNSSRVVSIDLSGKNISGKI---SS-AIFRLPYIQTINLSN 102 (968)
T ss_pred HHHHHHHHHHHhCCCCcccCCCCC--CCCCCCcCcceecCCCCcEEEEEecCCCccccC---Ch-HHhCCCCCCEEECCC
Confidence 68888887532 2346775 46789999999998778999999943 34443 33 388899999999999
Q ss_pred CCCcccCCcccc-CCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCC
Q 003465 111 SNISGNIPSEIG-ALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPI 189 (818)
Q Consensus 111 n~~~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 189 (818)
|.+.+.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+.+.+|..++++++|++|+|++|.+.+.+
T Consensus 103 n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 180 (968)
T PLN00113 103 NQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKI 180 (968)
T ss_pred CccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccC
Confidence 988888887654 778888888888877766553 34566666666666666666666666666666666666666666
Q ss_pred ccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCC
Q 003465 190 PFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLE 269 (818)
Q Consensus 190 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 269 (818)
|..++++++|++|++++|.+.+.+|..++++++|++|++++|.+.+.+|..++++++|++|++++|.+++.+|..+..++
T Consensus 181 p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 181 PNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred ChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 66666666666666666666655666666666666666666666555555555566666666666655555555555555
Q ss_pred CCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcC
Q 003465 270 NLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMS 349 (818)
Q Consensus 270 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls 349 (818)
+|++|++++|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+++
T Consensus 261 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~ 340 (968)
T PLN00113 261 NLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLW 340 (968)
T ss_pred CCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECc
Confidence 55555555555555555555555555555555555555555555555555555555555544444444444444444444
Q ss_pred CCcccccCCcCcCCCCCCCEEeccCCcC------------------------CCCCCcccCCCCCCCEEEccCCcCcccC
Q 003465 350 SNKLEGPIPLTIGDLTNLIYLDLSLNQL------------------------SGPIPSTFGHLTLLKFLNLNSNKLNGSI 405 (818)
Q Consensus 350 ~n~l~~~~~~~l~~l~~L~~L~Ls~n~l------------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 405 (818)
+|.+.+.+|..++.+++|+.|++++|++ .+.+|..+..+++|+.|++++|.+++.+
T Consensus 341 ~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~ 420 (968)
T PLN00113 341 SNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGEL 420 (968)
T ss_pred CCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeEC
Confidence 4444444444444444444444444444 4444444444455555555555555555
Q ss_pred CccccCCCCCCEEecccCcCcccCCccccCCCCCCEEECcCCcCCccCC-----------------------hhhhcCcc
Q 003465 406 PSELMNCFSLQSLILSNNSLTGRIPSEIRNLSYLHELDLSLNFISGMTP-----------------------PQHFKQKH 462 (818)
Q Consensus 406 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-----------------------~~~~~~~~ 462 (818)
|..+..+++|+.|++++|.+++.+|..+..+++|+.|++++|.+.+.+| ..+..+.
T Consensus 421 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~- 499 (968)
T PLN00113 421 PSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLS- 499 (968)
T ss_pred ChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhh-
Confidence 5555555555555555555554444444444444444444444433333 2222222
Q ss_pred ccccccccEEECCCCcCcccCCcccccccC----------CcccCChhhcCCcCCCEEECCCCcCccCCcccccCCCCCC
Q 003465 463 SIRDRLLTYVNHQFNRLSGQIPMTIGGLSK----------LSGSVPSEIGNCSGLLNVTLSNNSLDGTIPLEMGKIIFLE 532 (818)
Q Consensus 463 ~~~~~~L~~l~ls~n~l~g~~p~~~~~~~~----------l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 532 (818)
.|+.|++++|.++|.+|..+..+.. ++|.+|..++.+++|+.|||++|+++|.+|..+..+++|+
T Consensus 500 -----~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 574 (968)
T PLN00113 500 -----ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLV 574 (968)
T ss_pred -----ccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccC
Confidence 5777888888888888877665543 6788999999999999999999999999999999999999
Q ss_pred eeeCcCCCCcccCCc-ccccCCCCCcccCcCCCCCCC--CCCCCCCCCCc-ceeeehhhHHHHHHHHHHHHHHHHHHHHh
Q 003465 533 YLDLSYNNIPGTVPE-FINRIMPADLVPMINFSISPT--PSPASPQQEPN-KVMILLISIIFPIAAFVAFLAHGTLFLLR 608 (818)
Q Consensus 533 ~L~ls~N~l~g~ip~-~~~~~~~~~~~~~n~~~~~~~--~~~~~~~~~~~-~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 608 (818)
+|++++|+++|.+|. +++.++....+.||+.+|.+. ...++|...++ ....+++++++++++++++ +++++++++
T Consensus 575 ~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 653 (968)
T PLN00113 575 QVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLAL-VAFGFVFIR 653 (968)
T ss_pred EEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHH-HHHHHHHHH
Confidence 999999999999998 778888889999999999322 11114543322 2222222222222222222 222222223
Q ss_pred hhccc-ccccccccccCCCCcccc--cccCcccchHHHHHHHhhhhhhcccc----CcEEEEEc-CCCcEEEEEeccccc
Q 003465 609 RKNKR-AELTSGEIKSQDRDAFSI--WNCDGRIAFEEIIRATEDLISDIALE----LDVTAAFT-KHGCLVAEYGSEQGR 680 (818)
Q Consensus 609 ~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~at~~f~~~~~ig----g~vy~~~~-~~g~~vAvK~~~~~~ 680 (818)
++++. .+.. ........... ......++++++. ..|.+...+| |.||+|.. .+|..||||++....
T Consensus 654 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~ 727 (968)
T PLN00113 654 GRNNLELKRV---ENEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN 727 (968)
T ss_pred hhhccccccc---ccccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc
Confidence 22211 1110 00000000000 0111234555554 4567777787 89999996 679999999765432
Q ss_pred cchhhhhHhhh-----------------------------------------------------------c---------
Q 003465 681 SAFFKSFQNEA-----------------------------------------------------------H--------- 692 (818)
Q Consensus 681 ~~~~~~f~~E~-----------------------------------------------------------h--------- 692 (818)
....+ +.+.+ |
T Consensus 728 ~~~~~-~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH 806 (968)
T PLN00113 728 SIPSS-EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVV 806 (968)
T ss_pred cccHH-HHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeec
Confidence 11111 01111 3
Q ss_pred c---ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC--------------------------CCcc--
Q 003465 693 V---FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK--------------------------HPQE-- 741 (818)
Q Consensus 693 ~---~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~--------------------------~~~~-- 741 (818)
+ |+||++|+++++|+. ||.++....+ ...+||.+|+|||. .|.+
T Consensus 807 ~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~ 881 (968)
T PLN00113 807 GNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAE 881 (968)
T ss_pred CCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Confidence 1 889999999999986 7776544222 23468999999991 1110
Q ss_pred -----hHHHHhcccCCCccccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCCCc
Q 003465 742 -----ILSLFSSTSDPHITLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFPYL 810 (818)
Q Consensus 742 -----~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~~~ 810 (818)
.++.|++..........++|+.+.... ....+++..+.++|.+||+.+|++||+|.||+++|+++...
T Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 882 FGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV-SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred cCCCCcHHHHHHHhcCccchhheeCccccCCC-CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 122333322222234456677665443 33556778899999999999999999999999999998543
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.6e-52 Score=509.19 Aligned_cols=463 Identities=37% Similarity=0.567 Sum_probs=396.0
Q ss_pred CCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCC-CCCCCCcEEECcCCCCCCCCccccCCCCCCCEEE
Q 003465 101 PNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKL-GNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILD 179 (818)
Q Consensus 101 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 179 (818)
.+++.|+|++|.+.+.++..|..+++|++|+|++|++.+.+|..+ ..+++|++|+|++|.+++.+|. +.+++|++|+
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~ 146 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLD 146 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEE
Confidence 478999999999999999999999999999999999998888765 4999999999999999988885 5689999999
Q ss_pred ccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCC
Q 003465 180 LSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSG 259 (818)
Q Consensus 180 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 259 (818)
|++|.+++.+|..++++++|++|++++|.+.+.+|..++++++|++|++++|.+.+.+|..+.++++|+.|++++|.+++
T Consensus 147 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 226 (968)
T PLN00113 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSG 226 (968)
T ss_pred CcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccC
Q 003465 260 PLPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGN 339 (818)
Q Consensus 260 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~ 339 (818)
.+|..+..+++|++|++++|.+++.+|..++++++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..
T Consensus 227 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 306 (968)
T PLN00113 227 EIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQ 306 (968)
T ss_pred cCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEe
Q 003465 340 LENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLI 419 (818)
Q Consensus 340 l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 419 (818)
+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|+
T Consensus 307 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~ 386 (968)
T PLN00113 307 LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLI 386 (968)
T ss_pred CCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999888877766655555555555
Q ss_pred cccCcC------------------------cccCCccccCCCCCCEEECcCCcCCccCChhhhcCcc-------------
Q 003465 420 LSNNSL------------------------TGRIPSEIRNLSYLHELDLSLNFISGMTPPQHFKQKH------------- 462 (818)
Q Consensus 420 Ls~N~l------------------------~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~------------- 462 (818)
+++|.+ ++.+|..+.+++.|+.|++++|.+++.+|..+.....
T Consensus 387 l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~ 466 (968)
T PLN00113 387 LFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFG 466 (968)
T ss_pred CcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeee
Confidence 555544 4444444555555555555555555554443222110
Q ss_pred ----ccccccccEEECCCCcCcccCCcccccccC----------CcccCChhhcCCcCCCEEECCCCcCccCCcccccCC
Q 003465 463 ----SIRDRLLTYVNHQFNRLSGQIPMTIGGLSK----------LSGSVPSEIGNCSGLLNVTLSNNSLDGTIPLEMGKI 528 (818)
Q Consensus 463 ----~~~~~~L~~l~ls~n~l~g~~p~~~~~~~~----------l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 528 (818)
......|+.|++++|++++.+|..+..+.. ++|.+|..++++++|+.|+|++|.++|.+|..++.+
T Consensus 467 ~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 546 (968)
T PLN00113 467 GLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEM 546 (968)
T ss_pred ecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCc
Confidence 001124667777777777777766654433 568899999999999999999999999999999999
Q ss_pred CCCCeeeCcCCCCcccCCc--ccccCCCCCcccCcCCCC
Q 003465 529 IFLEYLDLSYNNIPGTVPE--FINRIMPADLVPMINFSI 565 (818)
Q Consensus 529 ~~L~~L~ls~N~l~g~ip~--~~~~~~~~~~~~~n~~~~ 565 (818)
++|+.|||++|+++|.+|. .....+....+.+|+..+
T Consensus 547 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 547 PVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred ccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 9999999999999999998 334455666667776554
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=328.28 Aligned_cols=323 Identities=26% Similarity=0.262 Sum_probs=181.4
Q ss_pred ceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEcccC
Q 003465 128 QILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSN 207 (818)
Q Consensus 128 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 207 (818)
+.||+++|.+....+..|.++++|+++++.+|.++ .+|.......+|+.|+|.+|.|+..-.+.+..++.|+.|||+.|
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 44555555555444455555555555555555554 44544333444555555555555444445555555555555555
Q ss_pred cCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCcCCc
Q 003465 208 QINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGPIPS 287 (818)
Q Consensus 208 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 287 (818)
.|+...-..|..-.++++|+|++|+|+..-...|..+.+|..|.|+.|+++...+..|..+++|+.|+|..|++.-.---
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~l 239 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGL 239 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhh
Confidence 55544334444445555555555555555555555555555666666665544444555566666666666655522233
Q ss_pred ccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCCC
Q 003465 288 TLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTNL 367 (818)
Q Consensus 288 ~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L 367 (818)
.|.++++|+.|.|..|++...-...|..+.++++|+|..|++...-..++.++++|+.|++|+|.|...-+..+..+++|
T Consensus 240 tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL 319 (873)
T KOG4194|consen 240 TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL 319 (873)
T ss_pred hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc
Confidence 45556666666666666655555555566666666666666655444555566666666666666655555555566666
Q ss_pred CEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEecccCcCcccCCc---cccCCCCCCEEEC
Q 003465 368 IYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSNNSLTGRIPS---EIRNLSYLHELDL 444 (818)
Q Consensus 368 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~---~l~~l~~L~~L~L 444 (818)
+.|+|++|+++...+..|..+..|++|+|++|++...-...|..+++|+.|||++|.+++.+.+ .|..+++|+.|++
T Consensus 320 ~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l 399 (873)
T KOG4194|consen 320 KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRL 399 (873)
T ss_pred eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheee
Confidence 6666666666655555666666666666666666544444555566666666666666554432 2445566666666
Q ss_pred cCCcCCc
Q 003465 445 SLNFISG 451 (818)
Q Consensus 445 s~N~l~~ 451 (818)
.+|++..
T Consensus 400 ~gNqlk~ 406 (873)
T KOG4194|consen 400 TGNQLKS 406 (873)
T ss_pred cCceeee
Confidence 6665543
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-38 Score=325.43 Aligned_cols=358 Identities=25% Similarity=0.223 Sum_probs=325.4
Q ss_pred CCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEcc
Q 003465 102 NLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLS 181 (818)
Q Consensus 102 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 181 (818)
.-++|++++|.+....+..|.++++|+.+++.+|.++ .+|...+...+|+.|+|.+|.|+..-.+.+..++.|+.|||+
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 4678999999999999999999999999999999999 788876777789999999999998888889999999999999
Q ss_pred CCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCC
Q 003465 182 SNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPL 261 (818)
Q Consensus 182 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 261 (818)
.|.++......|..-.++++|+|++|+|+..-...|.++.+|..|.|+.|+++...+..|.++++|+.|+|..|+|...-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 99999766667888889999999999999888889999999999999999999888889999999999999999998544
Q ss_pred CccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCCC
Q 003465 262 PQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLE 341 (818)
Q Consensus 262 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 341 (818)
--.|..+++|+.|.|..|.+.......|..+.++++|+|+.|++...-..++.+++.|+.|+|++|.|...-+..+.-++
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq 317 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ 317 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc
Confidence 55688899999999999999977777889999999999999999988888899999999999999999988888899999
Q ss_pred CCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCc---cccCCCCCCEE
Q 003465 342 NLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPS---ELMNCFSLQSL 418 (818)
Q Consensus 342 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L 418 (818)
+|+.|+|++|+++...+..|..+..|+.|+|++|.++..-...|..+++|++|||++|.++..+.+ .|..+++|+.|
T Consensus 318 kL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL 397 (873)
T KOG4194|consen 318 KLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKL 397 (873)
T ss_pred cceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhe
Confidence 999999999999988889999999999999999999977777899999999999999999876654 47789999999
Q ss_pred ecccCcCcccCCccccCCCCCCEEECcCCcCCccCChhhhcC
Q 003465 419 ILSNNSLTGRIPSEIRNLSYLHELDLSLNFISGMTPPQHFKQ 460 (818)
Q Consensus 419 ~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 460 (818)
++.+|++....-..|..++.|++|||.+|.|..+-|..+..+
T Consensus 398 ~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 398 RLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM 439 (873)
T ss_pred eecCceeeecchhhhccCcccceecCCCCcceeecccccccc
Confidence 999999996555689999999999999999998877766543
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.4e-38 Score=314.88 Aligned_cols=426 Identities=29% Similarity=0.437 Sum_probs=325.9
Q ss_pred cCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCC
Q 003465 97 FSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLS 176 (818)
Q Consensus 97 l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 176 (818)
+.++.-+.+|++++|++. ..|++++.+..++.|+.++|++. .+|+.++.+.+|+.|+.++|.+. .+|+.++.+..|+
T Consensus 64 l~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~ 140 (565)
T KOG0472|consen 64 LKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLE 140 (565)
T ss_pred hhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhh
Confidence 778888899999999888 67778999999999999999988 78888899999999999999988 6788888888999
Q ss_pred EEEccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCC
Q 003465 177 ILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQ 256 (818)
Q Consensus 177 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 256 (818)
.|+..+|+++ ..|..+..+.+|..|++.+|.+....|..+. ++.|++||...|.++ .+|+.++.+.+|+.|++..|+
T Consensus 141 dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nk 217 (565)
T KOG0472|consen 141 DLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNK 217 (565)
T ss_pred hhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcc
Confidence 9999999888 5677888888899999999988855555444 888999998888875 678888889999999999998
Q ss_pred CCCCCCccccCCCCCcEEEccccccCCcCCccc-CCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCc
Q 003465 257 LSGPLPQEIGYLENLVYLSLNVNNLTGPIPSTL-GRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPL 335 (818)
Q Consensus 257 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 335 (818)
+. .+| .|..+..|++|+++.|++. .+|... .++++|..||+.+|++. ..|..++.+.+|++||+++|.++ .+|.
T Consensus 218 i~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~ 292 (565)
T KOG0472|consen 218 IR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPY 292 (565)
T ss_pred cc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCc
Confidence 87 556 6888888999999988888 455544 47888999999999987 57788888888999999999888 5777
Q ss_pred cccCCCCCCEEEcCCCccccc--------------------------------------CCc---CcCCCCCCCEEeccC
Q 003465 336 GIGNLENLERVDMSSNKLEGP--------------------------------------IPL---TIGDLTNLIYLDLSL 374 (818)
Q Consensus 336 ~l~~l~~L~~L~Ls~n~l~~~--------------------------------------~~~---~l~~l~~L~~L~Ls~ 374 (818)
.++++ .|+.|-+.+|.+... .+. ....+.+.+.|++++
T Consensus 293 sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~ 371 (565)
T KOG0472|consen 293 SLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSD 371 (565)
T ss_pred ccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccc
Confidence 88888 888888888876310 000 111234567777777
Q ss_pred CcCCCCCCcccCCC--CCCCEEEccCCcCcccCCccccCCCCCCE-EecccCcCcccCCccccCCCCCCEEECcCCcCCc
Q 003465 375 NQLSGPIPSTFGHL--TLLKFLNLNSNKLNGSIPSELMNCFSLQS-LILSNNSLTGRIPSEIRNLSYLHELDLSLNFISG 451 (818)
Q Consensus 375 n~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 451 (818)
-+++......|..- .-....+++.|++. .+|..+..+..+.+ +.+++|.+ +.+|..++.+++|..|+|++|.+.+
T Consensus 372 ~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln~ 449 (565)
T KOG0472|consen 372 KQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLND 449 (565)
T ss_pred cccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhhh
Confidence 77774333333221 22667888888887 56766655555444 34444444 4777788888888888888887765
Q ss_pred cCChhhhcCccccccccccEEECCCCcCcccCCcccccccC---------CcccCCh-hhcCCcCCCEEECCCCcCccCC
Q 003465 452 MTPPQHFKQKHSIRDRLLTYVNHQFNRLSGQIPMTIGGLSK---------LSGSVPS-EIGNCSGLLNVTLSNNSLDGTI 521 (818)
Q Consensus 452 ~~p~~~~~~~~~~~~~~L~~l~ls~n~l~g~~p~~~~~~~~---------l~g~ip~-~~~~l~~L~~L~Ls~N~l~~~~ 521 (818)
. |.+.+... .|+.+|+|+|+|. .+|..+..... --|.++. .+.+|.+|..|||.+|.+. .|
T Consensus 450 L-P~e~~~lv------~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~I 520 (565)
T KOG0472|consen 450 L-PEEMGSLV------RLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QI 520 (565)
T ss_pred c-chhhhhhh------hhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hC
Confidence 4 66666665 6888888888775 44543322211 1234444 4999999999999999996 78
Q ss_pred cccccCCCCCCeeeCcCCCCcccCCc
Q 003465 522 PLEMGKIIFLEYLDLSYNNIPGTVPE 547 (818)
Q Consensus 522 p~~l~~l~~L~~L~ls~N~l~g~ip~ 547 (818)
|..+++|++|++|++++|+|. .|.
T Consensus 521 Pp~LgnmtnL~hLeL~gNpfr--~Pr 544 (565)
T KOG0472|consen 521 PPILGNMTNLRHLELDGNPFR--QPR 544 (565)
T ss_pred ChhhccccceeEEEecCCccC--CCH
Confidence 899999999999999999998 454
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.5e-35 Score=309.99 Aligned_cols=344 Identities=30% Similarity=0.398 Sum_probs=292.7
Q ss_pred CCCCCcEEEcCCCCCc-ccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCE
Q 003465 99 CFPNLESFRIWYSNIS-GNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSI 177 (818)
Q Consensus 99 ~l~~L~~L~L~~n~~~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 177 (818)
-||.++-.|+++|.++ +.+|.....|+.++.|.|...++. .+|+.++.|.+|++|.+++|++. .+-..++.|+.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 3667888899999998 568999999999999999999998 78999999999999999999987 56667889999999
Q ss_pred EEccCCCCCC-CCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCC
Q 003465 178 LDLSSNSLVG-PIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQ 256 (818)
Q Consensus 178 L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 256 (818)
+++..|++.. -+|..+-++..|..|||++|++. ..|..+...+++-+|+|++|+|..+.-..+.+++.|-.|||++|+
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 9999998753 47888889999999999999998 678889999999999999999986666677889999999999999
Q ss_pred CCCCCCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCC-CCCchhhcCCCCCCeeeccCCcCCCCcCc
Q 003465 257 LSGPLPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLF-GPIPPTLSHLTRLTTLKLFSNQINGSIPL 335 (818)
Q Consensus 257 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~-~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 335 (818)
+. .+|..+..+..|++|.|++|.+....-..+..+++|+.|.+++.+-+ ..+|.++..+.+|..++++.|.+. .+|.
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPe 239 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPE 239 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchH
Confidence 88 67778888999999999999887544445566788888888887654 347888888899999999999887 7888
Q ss_pred cccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCc-ccCCccccCCCC
Q 003465 336 GIGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLN-GSIPSELMNCFS 414 (818)
Q Consensus 336 ~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~ 414 (818)
.+.++++|+.|+||+|+++ .+....+...+|+.|++|.|+++ .+|+.+..+++|+.|++.+|+++ .-+|+.++.+.+
T Consensus 240 cly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~ 317 (1255)
T KOG0444|consen 240 CLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQ 317 (1255)
T ss_pred HHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhh
Confidence 8888999999999999987 44455666778899999999988 67888889999999999999876 347888888999
Q ss_pred CCEEecccCcCcccCCccccCCCCCCEEECcCCcCC
Q 003465 415 LQSLILSNNSLTGRIPSEIRNLSYLHELDLSLNFIS 450 (818)
Q Consensus 415 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 450 (818)
|+.+..++|.+. .+|++++.|..|+.|.|+.|.+-
T Consensus 318 Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi 352 (1255)
T KOG0444|consen 318 LEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI 352 (1255)
T ss_pred hHHHHhhccccc-cCchhhhhhHHHHHhccccccee
Confidence 999999988887 78888999998988888888764
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.98 E-value=7.4e-37 Score=305.36 Aligned_cols=390 Identities=30% Similarity=0.427 Sum_probs=302.6
Q ss_pred CCCCCcCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCC
Q 003465 92 LDQFNFSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGH 171 (818)
Q Consensus 92 l~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~ 171 (818)
+++. +..+..+..|+.++|++. .+|..++.+.+|+.|+.++|.+. .+|++++.+..|+.|+..+|+++ ..|..+.+
T Consensus 83 lp~a-ig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~ 158 (565)
T KOG0472|consen 83 LPAA-IGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVN 158 (565)
T ss_pred CCHH-HHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHH
Confidence 3554 888889999999999988 78888999999999999999998 67888999999999999999998 77888889
Q ss_pred CCCCCEEEccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEE
Q 003465 172 LTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLD 251 (818)
Q Consensus 172 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 251 (818)
+.+|..|++.+|++....|.. -+++.|++||...|-++ .+|..++.+.+|.-|++..|++. ..| .|..+..|++|+
T Consensus 159 ~~~l~~l~~~~n~l~~l~~~~-i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh 234 (565)
T KOG0472|consen 159 LSKLSKLDLEGNKLKALPENH-IAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELH 234 (565)
T ss_pred HHHHHHhhccccchhhCCHHH-HHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHH
Confidence 999999999999988544444 44889999999988886 67888999999999999999987 344 788888888888
Q ss_pred ccCCCCCCCCCcccc-CCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCC
Q 003465 252 LSSKQLSGPLPQEIG-YLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQIN 330 (818)
Q Consensus 252 L~~n~l~~~~~~~l~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 330 (818)
++.|++. .+|.+.. .+++|..|||..|+++ ..|+.+.-+.+|++||+++|.+++ .|..++++ .|+.|-+.+|.+.
T Consensus 235 ~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 235 VGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred hcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchH
Confidence 8888887 5555554 7888888888888888 678888888888888888888874 56678888 8888888888653
Q ss_pred C-------------------------------------CcCc-c---ccCCCCC--------------------------
Q 003465 331 G-------------------------------------SIPL-G---IGNLENL-------------------------- 343 (818)
Q Consensus 331 ~-------------------------------------~~~~-~---l~~l~~L-------------------------- 343 (818)
. ..+. . ...+.+.
T Consensus 311 TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~V 390 (565)
T KOG0472|consen 311 TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIV 390 (565)
T ss_pred HHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcce
Confidence 1 0000 0 0011223
Q ss_pred CEEEcCCCcccccCCcCcCCCCCCCE-EeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEeccc
Q 003465 344 ERVDMSSNKLEGPIPLTIGDLTNLIY-LDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSN 422 (818)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~l~~l~~L~~-L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 422 (818)
+.++++.|++. .+|..+..+..+.+ +.+++|.+ +.+|..+..+++|..|+|++|.+. .+|..++.+..|+.|+++.
T Consensus 391 t~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 391 TSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred EEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccc
Confidence 34455555554 34444444444333 33444443 366777788888999999888887 6788888888899999999
Q ss_pred CcCcccCCccccCCCCCCEEECcCCcCCccCChhhhcCccccccccccEEECCCCcCcccCCcccccccCCcccCChhhc
Q 003465 423 NSLTGRIPSEIRNLSYLHELDLSLNFISGMTPPQHFKQKHSIRDRLLTYVNHQFNRLSGQIPMTIGGLSKLSGSVPSEIG 502 (818)
Q Consensus 423 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~L~~l~ls~n~l~g~~p~~~~~~~~l~g~ip~~~~ 502 (818)
|+|. .+|..+..+..++.+-.++|++....|..+..+. +|+.||+.+|.+. .||..+|
T Consensus 468 NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~------nL~tLDL~nNdlq---------------~IPp~Lg 525 (565)
T KOG0472|consen 468 NRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMR------NLTTLDLQNNDLQ---------------QIPPILG 525 (565)
T ss_pred cccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhh------hcceeccCCCchh---------------hCChhhc
Confidence 9887 6787777777777777778888877777677766 8999999999987 4566899
Q ss_pred CCcCCCEEECCCCcCc
Q 003465 503 NCSGLLNVTLSNNSLD 518 (818)
Q Consensus 503 ~l~~L~~L~Ls~N~l~ 518 (818)
+|++|+.|++++|.|.
T Consensus 526 nmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 526 NMTNLRHLELDGNPFR 541 (565)
T ss_pred cccceeEEEecCCccC
Confidence 9999999999999998
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=4.5e-34 Score=299.00 Aligned_cols=367 Identities=31% Similarity=0.434 Sum_probs=318.1
Q ss_pred CEEEEEec--CCccccCCCCCCCcCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcE
Q 003465 76 SIIRISLS--GVNGIRGKLDQFNFSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVE 153 (818)
Q Consensus 76 ~v~~l~l~--~~~g~~~~l~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 153 (818)
-|+++++. ..+|.. -|.+...++.++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+..|+.||.
T Consensus 8 FVrGvDfsgNDFsg~~---FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDR---FPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred eeecccccCCcCCCCc---CchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 36667762 344433 2344778899999999998887 78999999999999999999998 56677899999999
Q ss_pred EECcCCCCCC-CCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCc
Q 003465 154 LYLSRSNLNG-PIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNK 232 (818)
Q Consensus 154 L~Ls~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 232 (818)
+++..|++.. -+|..+..|.-|.+|||++|++. ..|..+..-+++-+|+|++|+|..+.-..|-+++.|-.|||++|+
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 9999999864 37888999999999999999998 789999999999999999999996655667899999999999999
Q ss_pred CCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccC-CcCCcccCCCCCCCEEEccCCcCCCCCch
Q 003465 233 LNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLT-GPIPSTLGRLTSLSDLDLSHNSLFGPIPP 311 (818)
Q Consensus 233 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 311 (818)
+. .+|+.+..+..|++|+|++|.+...-...+..+++|+.|.+++.+-+ ..+|..+..+.+|..+|+|.|++. ..|+
T Consensus 162 Le-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPe 239 (1255)
T KOG0444|consen 162 LE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPE 239 (1255)
T ss_pred hh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchH
Confidence 97 57778899999999999999876543344556788899999987654 358889999999999999999997 7899
Q ss_pred hhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCC-CCCcccCCCCC
Q 003465 312 TLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSG-PIPSTFGHLTL 390 (818)
Q Consensus 312 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~ 390 (818)
.+.++++|+.|+|++|+++ .+....+...+|++|++|.|+++ .+|..++.++.|+.|.+.+|+++- .+|+.++.+.+
T Consensus 240 cly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~ 317 (1255)
T KOG0444|consen 240 CLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQ 317 (1255)
T ss_pred HHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhh
Confidence 9999999999999999998 45556677889999999999998 789999999999999999998863 47899999999
Q ss_pred CCEEEccCCcCcccCCccccCCCCCCEEecccCcCcccCCccccCCCCCCEEECcCCcCCccCC
Q 003465 391 LKFLNLNSNKLNGSIPSELMNCFSLQSLILSNNSLTGRIPSEIRNLSYLHELDLSLNFISGMTP 454 (818)
Q Consensus 391 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 454 (818)
|+++..++|.+. .+|+.+..|..|+.|.|+.|.+. .+|+.+.-++.|+.||+..|+---..|
T Consensus 318 Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 318 LEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred hHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCC
Confidence 999999999997 89999999999999999999987 789999999999999999997544433
No 9
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=2e-32 Score=300.61 Aligned_cols=397 Identities=32% Similarity=0.369 Sum_probs=204.7
Q ss_pred CcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccC
Q 003465 103 LESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSS 182 (818)
Q Consensus 103 L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 182 (818)
|+.||+++|.+. ..|..+..+.+|+.|+++.|.+. ..|.+..++.+|++|.|.+|.+. .+|..+..+++|++|++++
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSF 123 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccch
Confidence 555555554443 34445555555555555555555 34455555555555555555554 4555555555555555555
Q ss_pred CCCCCCCccCCCCCCC-------------------CcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCC
Q 003465 183 NSLVGPIPFTLGHLTQ-------------------LTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGD 243 (818)
Q Consensus 183 n~l~~~~~~~l~~l~~-------------------L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~ 243 (818)
|.+. .+|..+..++. ++.+++..|.+.+.++.++..++. .|+|.+|.+.. -.+.+
T Consensus 124 N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---~dls~ 197 (1081)
T KOG0618|consen 124 NHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---LDLSN 197 (1081)
T ss_pred hccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhh---hhhhh
Confidence 5554 33433433333 455555555555555555555554 56777766541 22334
Q ss_pred CCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeee
Q 003465 244 LTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLK 323 (818)
Q Consensus 244 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ 323 (818)
+.+|+.|....|++... .-..++|+.|+.++|.++...+. ....+|+++++++|++.+ +|++++.+.+|+.++
T Consensus 198 ~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~ 270 (1081)
T KOG0618|consen 198 LANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSN-LPEWIGACANLEALN 270 (1081)
T ss_pred ccchhhhhhhhcccceE----EecCcchheeeeccCcceeeccc--cccccceeeecchhhhhc-chHHHHhcccceEec
Confidence 44444444444443311 01123344444444444421111 122344455555554442 334444455555555
Q ss_pred ccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcc-------------------
Q 003465 324 LFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPST------------------- 384 (818)
Q Consensus 324 L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~------------------- 384 (818)
..+|++. .+|..+...++|+.|.+.+|.+. .+|.....+++|+.|+|..|++....+..
T Consensus 271 ~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~ 348 (1081)
T KOG0618|consen 271 ANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS 348 (1081)
T ss_pred ccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc
Confidence 5555442 34444444444444444444443 23333444444444444444443221111
Q ss_pred ------cCCCCCCCEEEccCCcCcccCCccccCCCCCCEEecccCcCcccCCccccCCCCCCEEECcCCcCCccCChhhh
Q 003465 385 ------FGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSNNSLTGRIPSEIRNLSYLHELDLSLNFISGMTPPQHF 458 (818)
Q Consensus 385 ------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 458 (818)
-..++.|+.|++.+|.++...-..+.+.++|+.|+|++|++.......+.+++.|++|+||+|+++.. |..+.
T Consensus 349 ~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~L-p~tva 427 (1081)
T KOG0618|consen 349 TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTL-PDTVA 427 (1081)
T ss_pred ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhh-hHHHH
Confidence 12234455556666666555444555556666666666666533333445566666666666665543 34444
Q ss_pred cCccccccccccEEECCCCcCcccCCcccccccCCcccCChhhcCCcCCCEEECCCCcCccCCcccccCCCCCCeeeCcC
Q 003465 459 KQKHSIRDRLLTYVNHQFNRLSGQIPMTIGGLSKLSGSVPSEIGNCSGLLNVTLSNNSLDGTIPLEMGKIIFLEYLDLSY 538 (818)
Q Consensus 459 ~~~~~~~~~~L~~l~ls~n~l~g~~p~~~~~~~~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~ 538 (818)
.+. .|.+|-..+|++. ..| .+..+++|+.+|+|.|+|+...-..--..+.|++||+|+
T Consensus 428 ~~~------~L~tL~ahsN~l~---------------~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSG 485 (1081)
T KOG0618|consen 428 NLG------RLHTLRAHSNQLL---------------SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSG 485 (1081)
T ss_pred hhh------hhHHHhhcCCcee---------------ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccC
Confidence 444 4555555555554 445 788899999999999999865433333338999999999
Q ss_pred CC
Q 003465 539 NN 540 (818)
Q Consensus 539 N~ 540 (818)
|.
T Consensus 486 N~ 487 (1081)
T KOG0618|consen 486 NT 487 (1081)
T ss_pred Cc
Confidence 97
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-32 Score=298.95 Aligned_cols=404 Identities=27% Similarity=0.342 Sum_probs=286.1
Q ss_pred CcCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCC-
Q 003465 96 NFSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTR- 174 (818)
Q Consensus 96 ~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~- 174 (818)
.+..+++|+.|+++.|.+. ..|.+.+++.+|++|+|.+|.+. ..|.++..+.+|++|++++|.+. .+|..+..+..
T Consensus 63 ~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~ 139 (1081)
T KOG0618|consen 63 QITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAE 139 (1081)
T ss_pred hhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHH
Confidence 3778899999999999988 56788999999999999999988 78999999999999999999987 56655544443
Q ss_pred ------------------CCEEEccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCC
Q 003465 175 ------------------LSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGP 236 (818)
Q Consensus 175 ------------------L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 236 (818)
++.+++..|.+.+.++..+..++. .|+|.+|.+.. ..+.++.+|+.|....|++...
T Consensus 140 ~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l 214 (1081)
T KOG0618|consen 140 EELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---LDLSNLANLEVLHCERNQLSEL 214 (1081)
T ss_pred HHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhh---hhhhhccchhhhhhhhcccceE
Confidence 455555555566666666666655 69999999872 3456677777777777766531
Q ss_pred CCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCC
Q 003465 237 IASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHL 316 (818)
Q Consensus 237 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 316 (818)
. -.-++|+.|+.+.|.++...+ -....+|+++++++|+++ .+|+|++.+.+|+.++..+|.+. .+|..+...
T Consensus 215 ~----~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~ 286 (1081)
T KOG0618|consen 215 E----ISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRI 286 (1081)
T ss_pred E----ecCcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhh
Confidence 1 122455566666665552211 112345666666666665 34466666666666666666653 344445555
Q ss_pred CCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCccc-------------------------ccCCcCcCCCCCCCEEe
Q 003465 317 TRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLE-------------------------GPIPLTIGDLTNLIYLD 371 (818)
Q Consensus 317 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~-------------------------~~~~~~l~~l~~L~~L~ 371 (818)
.+|+.|.+..|.+. .+|.....+++|++|+|..|++. ......-..++.|+.|+
T Consensus 287 ~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Ly 365 (1081)
T KOG0618|consen 287 TSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELY 365 (1081)
T ss_pred hhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHH
Confidence 55555555555554 34444455555555555555543 21111112345788999
Q ss_pred ccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEecccCcCcccCCccccCCCCCCEEECcCCcCCc
Q 003465 372 LSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSNNSLTGRIPSEIRNLSYLHELDLSLNFISG 451 (818)
Q Consensus 372 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 451 (818)
+.+|.+++..-..+.++++|+.|+|++|++.......+.++..|+.|+||+|+++ .+|..+.+++.|++|...+|++..
T Consensus 366 lanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~ 444 (1081)
T KOG0618|consen 366 LANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLS 444 (1081)
T ss_pred HhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceee
Confidence 9999999988788999999999999999998555567888999999999999999 788999999999999999999986
Q ss_pred cCChhhhcCccccccccccEEECCCCcCcccCCcccccccCCcccCChhhcCCcCCCEEECCCCcCccCCcccccCCCCC
Q 003465 452 MTPPQHFKQKHSIRDRLLTYVNHQFNRLSGQIPMTIGGLSKLSGSVPSEIGNCSGLLNVTLSNNSLDGTIPLEMGKIIFL 531 (818)
Q Consensus 452 ~~p~~~~~~~~~~~~~~L~~l~ls~n~l~g~~p~~~~~~~~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 531 (818)
. | .+.... .|+.+|+|.|+++...-. ..... ++|+.|||++|.-.-.--..|..+.++
T Consensus 445 f-P-e~~~l~------qL~~lDlS~N~L~~~~l~-------------~~~p~-p~LkyLdlSGN~~l~~d~~~l~~l~~l 502 (1081)
T KOG0618|consen 445 F-P-ELAQLP------QLKVLDLSCNNLSEVTLP-------------EALPS-PNLKYLDLSGNTRLVFDHKTLKVLKSL 502 (1081)
T ss_pred c-h-hhhhcC------cceEEecccchhhhhhhh-------------hhCCC-cccceeeccCCcccccchhhhHHhhhh
Confidence 5 4 666666 899999999999843221 12211 789999999998544455667777888
Q ss_pred CeeeCcCC
Q 003465 532 EYLDLSYN 539 (818)
Q Consensus 532 ~~L~ls~N 539 (818)
..+++.-|
T Consensus 503 ~~~~i~~~ 510 (1081)
T KOG0618|consen 503 SQMDITLN 510 (1081)
T ss_pred hheecccC
Confidence 88888766
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.94 E-value=6.8e-25 Score=270.48 Aligned_cols=357 Identities=25% Similarity=0.291 Sum_probs=282.3
Q ss_pred CCEEEEEec--CCccccCCCCCCCcCCCCCCcEEEcCCCC------CcccCCccccCCC-cCceecccCcccccCCCCCC
Q 003465 75 GSIIRISLS--GVNGIRGKLDQFNFSCFPNLESFRIWYSN------ISGNIPSEIGALS-KLQILDLSHNNLTGTIPSKL 145 (818)
Q Consensus 75 ~~v~~l~l~--~~~g~~~~l~~~~l~~l~~L~~L~L~~n~------~~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~p~~~ 145 (818)
..|.++.+. ... .+ .++...|.++++|+.|.+..+. +...+|..|..++ +|+.|++.++.+. .+|..|
T Consensus 532 ~~v~~i~l~~~~~~-~~-~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f 608 (1153)
T PLN03210 532 KKVLGITLDIDEID-EL-HIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF 608 (1153)
T ss_pred ceeeEEEeccCccc-ee-eecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC
Confidence 457766652 111 11 2244558999999999997653 3345777787775 6999999999887 678777
Q ss_pred CCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCE
Q 003465 146 GNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKE 225 (818)
Q Consensus 146 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 225 (818)
...+|++|++++|++. .++..+..+++|+.|+|+++.....+| .+..+++|++|++++|.....+|..+.++++|+.
T Consensus 609 -~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~ 685 (1153)
T PLN03210 609 -RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLED 685 (1153)
T ss_pred -CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCE
Confidence 5789999999999987 678888999999999999987666676 4888999999999999877788999999999999
Q ss_pred EEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcC
Q 003465 226 VDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSL 305 (818)
Q Consensus 226 L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l 305 (818)
|++++|.....+|..+ ++++|+.|++++|.....+|.. ..+|++|++++|.++ .+|..+ .+++|+.|++.++..
T Consensus 686 L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~ 759 (1153)
T PLN03210 686 LDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKS 759 (1153)
T ss_pred EeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccch
Confidence 9999986555677655 7899999999999766555543 468999999999987 566654 578899998877442
Q ss_pred C-------CCCchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCC
Q 003465 306 F-------GPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLS 378 (818)
Q Consensus 306 ~-------~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 378 (818)
. ...+......++|+.|++++|...+.+|..++++++|+.|++++|...+.+|..+ .+++|+.|++++|...
T Consensus 760 ~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L 838 (1153)
T PLN03210 760 EKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRL 838 (1153)
T ss_pred hhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcc
Confidence 1 1122223345789999999998888899999999999999999986655677665 7889999999998665
Q ss_pred CCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEecccCcCcccCCccccCCCCCCEEECcCCc
Q 003465 379 GPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSNNSLTGRIPSEIRNLSYLHELDLSLNF 448 (818)
Q Consensus 379 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 448 (818)
..+|.. .++|+.|+|++|.++ .+|.++..+++|+.|++++|+-...+|..+..+++|+.+++++|.
T Consensus 839 ~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 839 RTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 555543 367999999999997 678889999999999999966544678788889999999999885
No 12
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.8e-27 Score=249.92 Aligned_cols=172 Identities=26% Similarity=0.368 Sum_probs=141.2
Q ss_pred CcccchHHHHHHHhhhhhhcccc----CcEEEEEcCCCcEEEEEeccccccchhhhhHhhh-------------------
Q 003465 635 DGRIAFEEIIRATEDLISDIALE----LDVTAAFTKHGCLVAEYGSEQGRSAFFKSFQNEA------------------- 691 (818)
Q Consensus 635 ~~~~~~~~l~~at~~f~~~~~ig----g~vy~~~~~~g~~vAvK~~~~~~~~~~~~f~~E~------------------- 691 (818)
.+.|+|+++.+||++|+.++.+| |.||+|.+++|..||||++.....+..++|.+|+
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~ 141 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCL 141 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEe
Confidence 35699999999999999999998 8999999999999999977665432156699998
Q ss_pred ----------------------------------------------------------cc---ccccccCCCCccccccc
Q 003465 692 ----------------------------------------------------------HV---FNNILLNSEFEAFFGNF 710 (818)
Q Consensus 692 ----------------------------------------------------------h~---~~NILLd~~~~~ki~DF 710 (818)
|+ ++|||||++|+|||+||
T Consensus 142 e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDF 221 (361)
T KOG1187|consen 142 EGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDF 221 (361)
T ss_pred cCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCc
Confidence 11 79999999999999999
Q ss_pred ccceeccC-CCCCccccccccceeCCC--------------------------CCCcc--------hHHHHhcccCCCcc
Q 003465 711 GVARLLNS-DSSNRTLIAGTYRYIAPA--------------------------KHPQE--------ILSLFSSTSDPHIT 755 (818)
Q Consensus 711 Gla~~~~~-~~~~~~~~~gt~gy~aPE--------------------------~~~~~--------~l~~~~~~~~~~~~ 755 (818)
|||+.... ..+..+...||+||+||| +++.+ .++.|++....++.
T Consensus 222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~ 301 (361)
T KOG1187|consen 222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGK 301 (361)
T ss_pred cCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcc
Confidence 99987765 433322228999999999 22322 48889888887778
Q ss_pred ccceecccCC-CcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LTYILDQRIS-PPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~~~~d~~l~-~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
+.+++|+++. ... .+.+++.++.++|++|++.+|++||+|.||+++|+.+.
T Consensus 302 ~~eiiD~~l~~~~~--~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 302 LREIVDPRLKEGEY--PDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred hhheeCCCccCCCC--ChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 9999999997 333 12278999999999999999999999999999997764
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2.3e-23 Score=256.95 Aligned_cols=340 Identities=23% Similarity=0.217 Sum_probs=267.6
Q ss_pred CccccCCCcCceecccCcc------cccCCCCCCCCCC-CCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCc
Q 003465 118 PSEIGALSKLQILDLSHNN------LTGTIPSKLGNLN-NLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIP 190 (818)
Q Consensus 118 ~~~~~~l~~L~~L~Ls~n~------l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 190 (818)
+.+|.+|++|+.|.+.++. +...+|..|..++ +|+.|++.++.+. .+|..| ...+|+.|++++|.+. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 4568899999999997654 3334677777764 6999999999887 778777 5789999999999987 577
Q ss_pred cCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCC
Q 003465 191 FTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLEN 270 (818)
Q Consensus 191 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 270 (818)
..+..+++|+.|+|+++.....+| .++.+++|++|++++|.....+|..+.++++|+.|++++|.....+|..+ .+++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 788899999999999887555666 48889999999999988777889999999999999999986555777655 7899
Q ss_pred CcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCC-------CCcCccccCCCCC
Q 003465 271 LVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQIN-------GSIPLGIGNLENL 343 (818)
Q Consensus 271 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~-------~~~~~~l~~l~~L 343 (818)
|++|++++|.....+|.. .++|+.|++++|.+. .+|..+ .+++|+.|++.++... ...+......++|
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL 780 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL 780 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccc
Confidence 999999999766566643 468999999999986 456554 5788998988774421 1112223345789
Q ss_pred CEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEecccC
Q 003465 344 ERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSNN 423 (818)
Q Consensus 344 ~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 423 (818)
+.|++++|...+.+|..++++++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. ..+|+.|+|++|
T Consensus 781 ~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n 856 (1153)
T PLN03210 781 TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRT 856 (1153)
T ss_pred hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCC
Confidence 999999998888889999999999999999986655677665 7899999999998766566543 468999999999
Q ss_pred cCcccCCccccCCCCCCEEECcCCcCCccCChhhhcCccccccccccEEECCCCc
Q 003465 424 SLTGRIPSEIRNLSYLHELDLSLNFISGMTPPQHFKQKHSIRDRLLTYVNHQFNR 478 (818)
Q Consensus 424 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~L~~l~ls~n~ 478 (818)
.++ .+|.++..+++|+.|++++|+--..+|.....+. .|+.++++++.
T Consensus 857 ~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~------~L~~L~l~~C~ 904 (1153)
T PLN03210 857 GIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLK------HLETVDFSDCG 904 (1153)
T ss_pred CCc-cChHHHhcCCCCCEEECCCCCCcCccCccccccc------CCCeeecCCCc
Confidence 998 6888999999999999998543334555444444 67777777663
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=2.2e-26 Score=230.53 Aligned_cols=398 Identities=24% Similarity=0.219 Sum_probs=223.1
Q ss_pred CCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcC-CCCCCCCccccCCCCCCCEEEc
Q 003465 102 NLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSR-SNLNGPIPSTLGHLTRLSILDL 180 (818)
Q Consensus 102 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~L 180 (818)
...+++|..|.|+...+.+|+.+++||.|||++|+|+.+-|.+|.++.+|..|-+.+ |+|+......|.+|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 468899999999988888999999999999999999999999999999988777666 9998665668999999999999
Q ss_pred cCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCC
Q 003465 181 SSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGP 260 (818)
Q Consensus 181 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 260 (818)
.-|++.-.....|..+++|..|.+.+|.+..+.-..|..+..++.+.+..|.+.. ..+++.+... +..+.
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dCnL~wla~~-~a~~~---- 217 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DCNLPWLADD-LAMNP---- 217 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----ccccchhhhH-Hhhch----
Confidence 9999988778889999999999999999986555588899999999998887321 1112211110 00010
Q ss_pred CCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEE--Ec-cCCcCCCCCc-hhhcCCCCCCeeeccCCcCCCCcCcc
Q 003465 261 LPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDL--DL-SHNSLFGPIP-PTLSHLTRLTTLKLFSNQINGSIPLG 336 (818)
Q Consensus 261 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L--~L-s~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~ 336 (818)
..++...-..-..+.+.++....+..|... ++.+ .+ +.+...+..| ..|..+++|+.|+|++|++++.-+.+
T Consensus 218 --ietsgarc~~p~rl~~~Ri~q~~a~kf~c~--~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~a 293 (498)
T KOG4237|consen 218 --IETSGARCVSPYRLYYKRINQEDARKFLCS--LESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGA 293 (498)
T ss_pred --hhcccceecchHHHHHHHhcccchhhhhhh--HHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhh
Confidence 011111111111122222221111111100 0000 00 1111111111 22444455555555555555444444
Q ss_pred ccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccC-----Cccc--
Q 003465 337 IGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSI-----PSEL-- 409 (818)
Q Consensus 337 l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~-- 409 (818)
|.....++.|.|..|++...-...|.++..|+.|+|++|+|+..-|..|..+.+|.+|+|-.|.+.-.- .+|+
T Consensus 294 Fe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~ 373 (498)
T KOG4237|consen 294 FEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRK 373 (498)
T ss_pred hcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhh
Confidence 455555555555555544333334444555555555555555544555555555555555544432100 0000
Q ss_pred ---------cCCCCCCEEecccCcCcc---cCCccc---------cCCCCCCEEECcCCcCCccCChhhhcCcccccccc
Q 003465 410 ---------MNCFSLQSLILSNNSLTG---RIPSEI---------RNLSYLHELDLSLNFISGMTPPQHFKQKHSIRDRL 468 (818)
Q Consensus 410 ---------~~l~~L~~L~Ls~N~l~~---~~p~~l---------~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~ 468 (818)
.....++.+.++.+.+.. ..|+.. ..++.+.++.=-.|.....+|+.+-. .
T Consensus 374 ~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP~--------d 445 (498)
T KOG4237|consen 374 KSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIPV--------D 445 (498)
T ss_pred CCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCCc--------h
Confidence 111234444444443321 111111 01111211111111111112211110 2
Q ss_pred ccEEECCCCcCcccCCcccccccCCcccCChhhcCCcCCCEEECCCCcCccCCcccccCCCCCCeeeCcCC
Q 003465 469 LTYVNHQFNRLSGQIPMTIGGLSKLSGSVPSEIGNCSGLLNVTLSNNSLDGTIPLEMGKIIFLEYLDLSYN 539 (818)
Q Consensus 469 L~~l~ls~n~l~g~~p~~~~~~~~l~g~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 539 (818)
.+.+.+.+|.++ .+|.+ .+.+| .+|+|+|+++-.-...|.+++.|.+|-||||
T Consensus 446 ~telyl~gn~~~---------------~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 446 VTELYLDGNAIT---------------SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hHHHhcccchhc---------------ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 334455555554 34445 56677 8999999999888888999999999999987
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=7.1e-21 Score=217.68 Aligned_cols=265 Identities=28% Similarity=0.357 Sum_probs=143.6
Q ss_pred cCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEcc
Q 003465 126 KLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKLF 205 (818)
Q Consensus 126 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 205 (818)
.-..|+|++|.++ .+|..+. .+|+.|++++|+++ .+|.. +++|++|++++|+++. +|.. .++|+.|+++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeecc
Confidence 3445666666665 4454443 25566666666655 34431 3455555555555552 2321 2345555555
Q ss_pred cCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCcC
Q 003465 206 SNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGPI 285 (818)
Q Consensus 206 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 285 (818)
+|.++. +|.. .++|+.|++++|+++. +|. .+++|+.|++++|++++ +
T Consensus 271 ~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-------------------------LP~---~p~~L~~LdLS~N~L~~-L 317 (788)
T PRK15387 271 SNPLTH-LPAL---PSGLCKLWIFGNQLTS-------------------------LPV---LPPGLQELSVSDNQLAS-L 317 (788)
T ss_pred CCchhh-hhhc---hhhcCEEECcCCcccc-------------------------ccc---cccccceeECCCCcccc-C
Confidence 555442 2221 1334444555544442 222 12344555555554442 2
Q ss_pred CcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCC
Q 003465 286 PSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLT 365 (818)
Q Consensus 286 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~ 365 (818)
|.. ..+|+.|++++|.+.+ +|.. ..+|+.|+|++|++++ +|.. .++|+.|++++|.+.. +|.. ..
T Consensus 318 p~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~ 382 (788)
T PRK15387 318 PAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PS 382 (788)
T ss_pred CCC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---cc
Confidence 221 1234455555555542 2221 1355566666666553 3321 2355666666666653 3332 24
Q ss_pred CCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEecccCcCcccCCccccCCCCCCEEECc
Q 003465 366 NLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSNNSLTGRIPSEIRNLSYLHELDLS 445 (818)
Q Consensus 366 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls 445 (818)
+|+.|++++|++++ +|.. .++|+.|++++|+++. +|.. ..+|+.|++++|+++ .+|..+.++++|+.|+|+
T Consensus 383 ~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 56777777777764 3432 2567788888888773 5543 246778888888887 678888888888888888
Q ss_pred CCcCCccCChhhh
Q 003465 446 LNFISGMTPPQHF 458 (818)
Q Consensus 446 ~N~l~~~~p~~~~ 458 (818)
+|++++..+..+.
T Consensus 454 ~N~Ls~~~~~~L~ 466 (788)
T PRK15387 454 GNPLSERTLQALR 466 (788)
T ss_pred CCCCCchHHHHHH
Confidence 8888887766553
No 16
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.85 E-value=1.6e-23 Score=210.26 Aligned_cols=273 Identities=25% Similarity=0.258 Sum_probs=185.5
Q ss_pred EEEEEecCCccccCCCCCCCcCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccC-cccccCCCCCCCCCCCCcEEE
Q 003465 77 IIRISLSGVNGIRGKLDQFNFSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSH-NNLTGTIPSKLGNLNNLVELY 155 (818)
Q Consensus 77 v~~l~l~~~~g~~~~l~~~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~ 155 (818)
.+.|.+. +..+..+|+.+|..+++||.|||+.|+|+..-|++|..+++|..|-+.+ |+|+......|++|..|+.|.
T Consensus 69 tveirLd--qN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 69 TVEIRLD--QNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred ceEEEec--cCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 4445552 2235566888899999999999999999999999999999988887766 999976667899999999999
Q ss_pred CcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEcccCcCC------------ccCCccccCCCCC
Q 003465 156 LSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQIN------------GCIPLDFGNLRHL 223 (818)
Q Consensus 156 Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~------------~~~~~~l~~l~~L 223 (818)
+.-|++.-...+.|..|++|..|.+.+|.+....-..|..+..++++.+..|.+- ...|..++...-.
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 9999999777889999999999999999998555558999999999999988732 1223333433333
Q ss_pred CEEEccCCcCCCCCCCCCCCCCcceEE--Ec-cCCCCCCCCC-ccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEE
Q 003465 224 KEVDLSGNKLNGPIASTIGDLTNLNSL--DL-SSKQLSGPLP-QEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLD 299 (818)
Q Consensus 224 ~~L~l~~n~l~~~~~~~l~~l~~L~~L--~L-~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 299 (818)
.-..+.+.++....+..|... ++.+ .+ +.+...+..| ..|..+++|++|+|++|+++..-+.+|.....++.|.
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~--~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~ 304 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCS--LESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELY 304 (498)
T ss_pred chHHHHHHHhcccchhhhhhh--HHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhh
Confidence 333344444332222222111 1111 11 1121222222 2355666666666666666666666666666666666
Q ss_pred ccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcc
Q 003465 300 LSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKL 353 (818)
Q Consensus 300 Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l 353 (818)
|..|++...-...|.++..|+.|+|.+|+|+...|.+|..+.+|.+|++-.|.+
T Consensus 305 L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 305 LTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred cCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 666666555455566666666666666666666666666666666666666554
No 17
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=1.2e-20 Score=215.73 Aligned_cols=265 Identities=26% Similarity=0.349 Sum_probs=175.3
Q ss_pred CCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEc
Q 003465 101 PNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDL 180 (818)
Q Consensus 101 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 180 (818)
..-..|+|+.+.++ .+|+.+. ++|+.|++++|+++ .+|.. +++|++|++++|+++ .+|.. .++|+.|++
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeec
Confidence 34678999999998 6787776 48999999999999 46653 578999999999998 55643 468999999
Q ss_pred cCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCC
Q 003465 181 SSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGP 260 (818)
Q Consensus 181 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 260 (818)
++|.++. +|.. .++|+.|++++|+++. +|.. +++|+.|++++|++++ +|.. ..+|+.|++++|.+++
T Consensus 270 s~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 270 FSNPLTH-LPAL---PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS- 336 (788)
T ss_pred cCCchhh-hhhc---hhhcCEEECcCCcccc-cccc---ccccceeECCCCcccc-CCCC---cccccccccccCcccc-
Confidence 9999874 4442 3678999999999984 4542 4678999999998875 3332 2457777777777763
Q ss_pred CCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCC
Q 003465 261 LPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNL 340 (818)
Q Consensus 261 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l 340 (818)
+|.. ..+|++|+|++|+++. +|.. ..+|+.|++++|.+.. +|.. .
T Consensus 337 LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~------------------------ 381 (788)
T PRK15387 337 LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---P------------------------ 381 (788)
T ss_pred cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---c------------------------
Confidence 3431 2356666666666663 3332 2345555555555542 2321 1
Q ss_pred CCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEec
Q 003465 341 ENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLIL 420 (818)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 420 (818)
.+|+.|++++|.+.+ +|.. .++|+.|++++|++++ +|.. ..+|+.|++++|+++ .+|..+..+++|+.|+|
T Consensus 382 ~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdL 452 (788)
T PRK15387 382 SGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 452 (788)
T ss_pred cccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEEC
Confidence 244555555555542 2221 2356666666666653 3432 235666777777776 56666777777777777
Q ss_pred ccCcCcccCCccc
Q 003465 421 SNNSLTGRIPSEI 433 (818)
Q Consensus 421 s~N~l~~~~p~~l 433 (818)
++|++++..+..+
T Consensus 453 s~N~Ls~~~~~~L 465 (788)
T PRK15387 453 EGNPLSERTLQAL 465 (788)
T ss_pred CCCCCCchHHHHH
Confidence 7777776665554
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=1.2e-19 Score=209.27 Aligned_cols=247 Identities=26% Similarity=0.400 Sum_probs=140.0
Q ss_pred CcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEc
Q 003465 125 SKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKL 204 (818)
Q Consensus 125 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 204 (818)
.+...|+++++.++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|.++ .+|..+. .+|+.|++
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 34667777777776 4555443 46777777777777 4555443 46777777777776 3454433 36777777
Q ss_pred ccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCc
Q 003465 205 FSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGP 284 (818)
Q Consensus 205 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 284 (818)
++|.+. .+|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.++.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-
Confidence 777776 4455443 467777777777663 444442 367777777776663 343322 356666666666663
Q ss_pred CCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCC
Q 003465 285 IPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDL 364 (818)
Q Consensus 285 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 364 (818)
+|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|++.. +|..+.
T Consensus 319 LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~-- 387 (754)
T PRK15370 319 LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN-LPENLP-- 387 (754)
T ss_pred CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-CCHhHH--
Confidence 34322 2456666666666653 343332 46666666666665 3444332 456666666666652 333332
Q ss_pred CCCCEEeccCCcCCCCCCcc----cCCCCCCCEEEccCCcCc
Q 003465 365 TNLIYLDLSLNQLSGPIPST----FGHLTLLKFLNLNSNKLN 402 (818)
Q Consensus 365 ~~L~~L~Ls~n~l~~~~~~~----~~~l~~L~~L~L~~N~l~ 402 (818)
.+|+.|++++|++.. +|.. +..++.+..|++.+|.+.
T Consensus 388 ~sL~~LdLs~N~L~~-LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 AALQIMQASRNNLVR-LPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHHHHhhccCCccc-CchhHHHHhhcCCCccEEEeeCCCcc
Confidence 245566666666552 2322 223345555555555554
No 19
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=1.6e-19 Score=208.31 Aligned_cols=265 Identities=26% Similarity=0.452 Sum_probs=206.3
Q ss_pred CCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEc
Q 003465 101 PNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDL 180 (818)
Q Consensus 101 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 180 (818)
.+...|++++++++ .+|..+. ++|+.|+|++|+++ .+|..+. .+|++|++++|.++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 45789999999888 4666554 58999999999999 5676554 58999999999998 5676554 47999999
Q ss_pred cCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCC
Q 003465 181 SSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGP 260 (818)
Q Consensus 181 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 260 (818)
++|.+. .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|.++.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-
Confidence 999998 5676654 58999999999998 4676664 589999999999985 454443 579999999999984
Q ss_pred CCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCC
Q 003465 261 LPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNL 340 (818)
Q Consensus 261 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l 340 (818)
+|..+ .++|++|++++|.++. +|..+. ++|+.|++++|++. .+|..+ .++|+.|++++|+++ .+|..+.
T Consensus 319 LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~-- 387 (754)
T PRK15370 319 LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP-- 387 (754)
T ss_pred CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH--
Confidence 55544 3689999999999985 666553 79999999999997 466655 378999999999998 4666554
Q ss_pred CCCCEEEcCCCcccccCCcC----cCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcc
Q 003465 341 ENLERVDMSSNKLEGPIPLT----IGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNG 403 (818)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~~~~----l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 403 (818)
.+|+.|++++|++. .+|.. ...++.+..|++.+|.++. ..+.+|+.| ++.+.+.|
T Consensus 388 ~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~g 446 (754)
T PRK15370 388 AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQG 446 (754)
T ss_pred HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccC
Confidence 47999999999998 44543 3456889999999999873 234455555 34444443
No 20
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.76 E-value=5.2e-19 Score=191.84 Aligned_cols=176 Identities=19% Similarity=0.233 Sum_probs=128.1
Q ss_pred cccCcccchHHHHHHHhhhhhh---------cccc----CcEEEEEcC----CCcEEEEEeccccccch-hhhhHhhh--
Q 003465 632 WNCDGRIAFEEIIRATEDLISD---------IALE----LDVTAAFTK----HGCLVAEYGSEQGRSAF-FKSFQNEA-- 691 (818)
Q Consensus 632 ~~~~~~~~~~~l~~at~~f~~~---------~~ig----g~vy~~~~~----~g~~vAvK~~~~~~~~~-~~~f~~E~-- 691 (818)
..+...++|||--+|...|..+ .+|| |+||+|.++ ....||||.++.+..+. .++|..|+
T Consensus 604 k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsI 683 (996)
T KOG0196|consen 604 KTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASI 683 (996)
T ss_pred eeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhh
Confidence 3445678999999999888755 3566 999999973 24689999888775544 45799998
Q ss_pred ----------------------------------------------------------------------cc---ccccc
Q 003465 692 ----------------------------------------------------------------------HV---FNNIL 698 (818)
Q Consensus 692 ----------------------------------------------------------------------h~---~~NIL 698 (818)
|+ +.|||
T Consensus 684 MGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNIL 763 (996)
T KOG0196|consen 684 MGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNIL 763 (996)
T ss_pred cccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhhee
Confidence 22 78999
Q ss_pred cCCCCcccccccccceeccCCCCC-ccccccc--cceeCCC----CCCcchHHHHh-------cccCCC-----ccccce
Q 003465 699 LNSEFEAFFGNFGVARLLNSDSSN-RTLIAGT--YRYIAPA----KHPQEILSLFS-------STSDPH-----ITLTYI 759 (818)
Q Consensus 699 Ld~~~~~ki~DFGla~~~~~~~~~-~~~~~gt--~gy~aPE----~~~~~~l~~~~-------~~~~~~-----~~~~~~ 759 (818)
++.+...|||||||+|.++++... .++..|- +.|.||| |+.+..-+.|+ ...+.+ ..-.++
T Consensus 764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV 843 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 843 (996)
T ss_pred eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH
Confidence 999999999999999998776532 2333333 6899999 55554334443 222222 222233
Q ss_pred ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 760 LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 760 ~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
+.....+...+.+++|+..+.++|+.||++|..+||++.|+|..|+++
T Consensus 844 IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl 891 (996)
T KOG0196|consen 844 IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL 891 (996)
T ss_pred HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence 333333333345789999999999999999999999999999999988
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=1.1e-19 Score=195.43 Aligned_cols=275 Identities=23% Similarity=0.252 Sum_probs=126.1
Q ss_pred EEcCCCCCc-ccCCccccCCCcCceecccCcccccC----CCCCCCCCCCCcEEECcCCCCCC------CCccccCCCCC
Q 003465 106 FRIWYSNIS-GNIPSEIGALSKLQILDLSHNNLTGT----IPSKLGNLNNLVELYLSRSNLNG------PIPSTLGHLTR 174 (818)
Q Consensus 106 L~L~~n~~~-~~~~~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~n~l~~------~~p~~l~~l~~ 174 (818)
|+|..+.++ ......+..+.+|++|+++++.++.. ++..+...++|++|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 445555554 22334445555666666666665321 33344555556666666665541 12233445555
Q ss_pred CCEEEccCCCCCCCCccCCCCCCC---CcEEEcccCcCCc----cCCccccCC-CCCCEEEccCCcCCCCCCCCCCCCCc
Q 003465 175 LSILDLSSNSLVGPIPFTLGHLTQ---LTTLKLFSNQING----CIPLDFGNL-RHLKEVDLSGNKLNGPIASTIGDLTN 246 (818)
Q Consensus 175 L~~L~L~~n~l~~~~~~~l~~l~~---L~~L~L~~n~l~~----~~~~~l~~l-~~L~~L~l~~n~l~~~~~~~l~~l~~ 246 (818)
|+.|++++|.+.+..+..+..+.+ |++|++++|.+++ .+...+..+ ++|++|++++|.+++....
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~------- 155 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE------- 155 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH-------
Confidence 666666655554433333333322 5555555555442 111222333 4445555555444421100
Q ss_pred ceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCc----CCcccCCCCCCCEEEccCCcCCCC----CchhhcCCCC
Q 003465 247 LNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGP----IPSTLGRLTSLSDLDLSHNSLFGP----IPPTLSHLTR 318 (818)
Q Consensus 247 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~ 318 (818)
.++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+.+. +...+..+++
T Consensus 156 -------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~ 222 (319)
T cd00116 156 -------------ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKS 222 (319)
T ss_pred -------------HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCC
Confidence 0111222333444444444444321 112223334555555555544322 1223344555
Q ss_pred CCeeeccCCcCCCCcCcccc-----CCCCCCEEEcCCCcccc----cCCcCcCCCCCCCEEeccCCcCCCC----CCccc
Q 003465 319 LTTLKLFSNQINGSIPLGIG-----NLENLERVDMSSNKLEG----PIPLTIGDLTNLIYLDLSLNQLSGP----IPSTF 385 (818)
Q Consensus 319 L~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~Ls~n~l~~----~~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~~ 385 (818)
|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..+++|+++++++|.++.. ....+
T Consensus 223 L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~ 302 (319)
T cd00116 223 LEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESL 302 (319)
T ss_pred CCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHH
Confidence 55555555555432111111 13566666666666541 1222334456667777777766643 22233
Q ss_pred CCC-CCCCEEEccCCc
Q 003465 386 GHL-TLLKFLNLNSNK 400 (818)
Q Consensus 386 ~~l-~~L~~L~L~~N~ 400 (818)
... +.|++|++.+|.
T Consensus 303 ~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 303 LEPGNELESLWVKDDS 318 (319)
T ss_pred hhcCCchhhcccCCCC
Confidence 333 566777766654
No 22
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=1.3e-19 Score=194.62 Aligned_cols=282 Identities=24% Similarity=0.238 Sum_probs=126.8
Q ss_pred ecccCccccc-CCCCCCCCCCCCcEEECcCCCCCCC----CccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEc
Q 003465 130 LDLSHNNLTG-TIPSKLGNLNNLVELYLSRSNLNGP----IPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKL 204 (818)
Q Consensus 130 L~Ls~n~l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 204 (818)
|+|..+.+++ ..+..+..+.+|++|+++++.++.. ++..+...++|++|+++++.+.+ .+..+
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~----------- 70 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL----------- 70 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH-----------
Confidence 4555555542 2233344455566666666655321 23334444555555555554431 00000
Q ss_pred ccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCC---cceEEEccCCCCCCC----CCccccCC-CCCcEEEc
Q 003465 205 FSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLT---NLNSLDLSSKQLSGP----LPQEIGYL-ENLVYLSL 276 (818)
Q Consensus 205 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~---~L~~L~L~~n~l~~~----~~~~l~~l-~~L~~L~L 276 (818)
..++..+..+++|++|++++|.+.+..+..+..+. +|++|++++|.+++. +...+..+ ++|+.|++
T Consensus 71 ------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L 144 (319)
T cd00116 71 ------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVL 144 (319)
T ss_pred ------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEc
Confidence 11122333444455555554444332222222222 255555555544421 11222333 45555555
Q ss_pred cccccCCc----CCcccCCCCCCCEEEccCCcCCCC----CchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEc
Q 003465 277 NVNNLTGP----IPSTLGRLTSLSDLDLSHNSLFGP----IPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDM 348 (818)
Q Consensus 277 ~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 348 (818)
++|.+++. ++..+..+++|++|++++|.+.+. ++..+..+++|+.|++++|.+.+....
T Consensus 145 ~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~------------- 211 (319)
T cd00116 145 GRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS------------- 211 (319)
T ss_pred CCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH-------------
Confidence 55555421 122333444555555555555421 112223334455555554444321110
Q ss_pred CCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCccc-----CCCCCCCEEEccCCcCcc----cCCccccCCCCCCEEe
Q 003465 349 SSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTF-----GHLTLLKFLNLNSNKLNG----SIPSELMNCFSLQSLI 419 (818)
Q Consensus 349 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~ 419 (818)
.+...+..+++|++|++++|.+++.....+ ...+.|+.|++++|.++. .+...+..+++|+.++
T Consensus 212 -------~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~ 284 (319)
T cd00116 212 -------ALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELD 284 (319)
T ss_pred -------HHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEE
Confidence 112233444555555555555543211111 123567777777776651 2223444556777777
Q ss_pred cccCcCccc----CCccccCC-CCCCEEECcCCcC
Q 003465 420 LSNNSLTGR----IPSEIRNL-SYLHELDLSLNFI 449 (818)
Q Consensus 420 Ls~N~l~~~----~p~~l~~l-~~L~~L~Ls~N~l 449 (818)
+++|.+... +...+... +.|+.+++.+|++
T Consensus 285 l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 285 LRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 777777643 22233333 5777777777653
No 23
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.68 E-value=5.3e-19 Score=157.76 Aligned_cols=155 Identities=34% Similarity=0.554 Sum_probs=88.4
Q ss_pred CCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEE
Q 003465 123 ALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTL 202 (818)
Q Consensus 123 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 202 (818)
++.+++.|.||+|+++ .+|..+..+.+|+.|++++|++. .+|..++.+++|++|++.-|++. .+|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3445555555555555 44445555555555555555555 45555555555555555555554 455555555555555
Q ss_pred EcccCcCC-ccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEcccccc
Q 003465 203 KLFSNQIN-GCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNL 281 (818)
Q Consensus 203 ~L~~n~l~-~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 281 (818)
||.+|++. ..+|..|..++.|+.|+++.|.+. .+|..++++++|+.|.+..|.+- .+|..++.+..|++|.+.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 55555553 245555555556666666666554 45555556666666666655554 4555566666666666666666
Q ss_pred C
Q 003465 282 T 282 (818)
Q Consensus 282 ~ 282 (818)
+
T Consensus 186 ~ 186 (264)
T KOG0617|consen 186 T 186 (264)
T ss_pred e
Confidence 5
No 24
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.67 E-value=8.3e-19 Score=156.52 Aligned_cols=166 Identities=30% Similarity=0.511 Sum_probs=150.5
Q ss_pred cCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCC
Q 003465 97 FSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLS 176 (818)
Q Consensus 97 l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 176 (818)
+..+.++..|.|++|+++ .+|+.+..+.+|++|++++|+++ .+|.+++.+++|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 566778899999999998 56778999999999999999999 78999999999999999999998 8999999999999
Q ss_pred EEEccCCCCCC-CCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCC
Q 003465 177 ILDLSSNSLVG-PIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSK 255 (818)
Q Consensus 177 ~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n 255 (818)
+|||.+|++.. .+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+..|.+. .+|..++.++.|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 99999999864 57888889999999999999998 78999999999999999999986 67899999999999999999
Q ss_pred CCCCCCCccccCC
Q 003465 256 QLSGPLPQEIGYL 268 (818)
Q Consensus 256 ~l~~~~~~~l~~l 268 (818)
+++ .+|..++.+
T Consensus 184 rl~-vlppel~~l 195 (264)
T KOG0617|consen 184 RLT-VLPPELANL 195 (264)
T ss_pred eee-ecChhhhhh
Confidence 999 556656543
No 25
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.62 E-value=3.2e-15 Score=154.51 Aligned_cols=117 Identities=20% Similarity=0.319 Sum_probs=75.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC--------CCC-----cc----hHHHHhc--c---
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA--------KHP-----QE----ILSLFSS--T--- 749 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE--------~~~-----~~----~l~~~~~--~--- 749 (818)
++|||+.+|+++.|||||||..+..+.. .+..-+||.+||||| +.+ .| .++-|.. +
T Consensus 344 SkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~ 423 (534)
T KOG3653|consen 344 SKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTD 423 (534)
T ss_pred ccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 7899999999999999999998875532 234578999999999 211 11 4556631 1
Q ss_pred ----cCCCc------------ccc----ceecccCCCcCccch--HHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 750 ----SDPHI------------TLT----YILDQRISPPKKQKI--VQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 750 ----~~~~~------------~~~----~~~d~~l~~~~~~~~--~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..++. .+. -++..+.++..++.+ ...+..+.+..-.||+.||+.|-|+.-|.+++.++
T Consensus 424 ~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 424 ADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred ccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 01110 011 112222332221111 12345566788899999999999999999999888
Q ss_pred CCc
Q 003465 808 PYL 810 (818)
Q Consensus 808 ~~~ 810 (818)
...
T Consensus 504 ~~~ 506 (534)
T KOG3653|consen 504 MML 506 (534)
T ss_pred hcc
Confidence 333
No 26
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.60 E-value=1.4e-15 Score=161.61 Aligned_cols=111 Identities=20% Similarity=0.310 Sum_probs=78.3
Q ss_pred ccccccCCCC-cccccccccceeccCCCCCccccccccceeCCC--C---CCcc--------hHHHHhc--c--cCCCcc
Q 003465 694 FNNILLNSEF-EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA--K---HPQE--------ILSLFSS--T--SDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~-~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE--~---~~~~--------~l~~~~~--~--~~~~~~ 755 (818)
++|||+|.++ ++||||||++|.........+..+||++||||| + .+++ .++-|.- . .+....
T Consensus 171 ~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~ 250 (362)
T KOG0192|consen 171 SDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA 250 (362)
T ss_pred hhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC
Confidence 7899999998 999999999998765434455589999999999 2 2333 4555532 1 222211
Q ss_pred ----ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 ----LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ----~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
...++....++.. +..+...+..++.+||+.+|+.||++.+++..|+.+
T Consensus 251 ~~~~~~~v~~~~~Rp~~---p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 251 PVQVASAVVVGGLRPPI---PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHHHHHHHHhcCCCCCC---CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 1112222333332 444777788888899999999999999999999977
No 27
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.59 E-value=8.1e-16 Score=162.73 Aligned_cols=151 Identities=18% Similarity=0.175 Sum_probs=106.8
Q ss_pred CcEEEEEcCCCcEEEEEeccccccchhhhhHhhh----------------------------------------------
Q 003465 658 LDVTAAFTKHGCLVAEYGSEQGRSAFFKSFQNEA---------------------------------------------- 691 (818)
Q Consensus 658 g~vy~~~~~~g~~vAvK~~~~~~~~~~~~f~~E~---------------------------------------------- 691 (818)
|+||.|.+.....||||.++... ...+.|.+|+
T Consensus 220 G~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~ 298 (468)
T KOG0197|consen 220 GEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGG 298 (468)
T ss_pred ceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCC
Confidence 99999999777799999776653 2446788887
Q ss_pred ---------------------------cc---ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC----
Q 003465 692 ---------------------------HV---FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA---- 736 (818)
Q Consensus 692 ---------------------------h~---~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE---- 736 (818)
|+ +.|||+|++..+|||||||||...++... .....--+.|.|||
T Consensus 299 ~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~ 378 (468)
T KOG0197|consen 299 LLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNY 378 (468)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhh
Confidence 22 78999999999999999999966544332 23333446899999
Q ss_pred CCCcchHHHHh------------cccCCCccccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 737 KHPQEILSLFS------------STSDPHITLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 737 ~~~~~~l~~~~------------~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
.+.+-.-+.|+ +..++.....+++..--.+...+.+..|+..+.+|+..||+.+|++|||+......|
T Consensus 379 ~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 379 GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVL 458 (468)
T ss_pred CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHH
Confidence 11111112232 233334444444444334444455778899999999999999999999999999999
Q ss_pred ccCCC
Q 003465 805 LKFPY 809 (818)
Q Consensus 805 ~~~~~ 809 (818)
+.+..
T Consensus 459 ~~~~~ 463 (468)
T KOG0197|consen 459 EDFFT 463 (468)
T ss_pred HHhhh
Confidence 88744
No 28
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.54 E-value=2.2e-15 Score=167.43 Aligned_cols=116 Identities=15% Similarity=0.180 Sum_probs=77.2
Q ss_pred ccccccCCCCcccccccccceeccC-CC-CCccccccccceeCCC----CCCcchHHHHhcccC----------C--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNS-DS-SNRTLIAGTYRYIAPA----KHPQEILSLFSSTSD----------P--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~-~~-~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~~~----------~--~~~ 755 (818)
++|+|+.+++.+|||||||+|..-. |. .......=-++||+|| ++.+..-+.|+.... + ...
T Consensus 631 TRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS 710 (774)
T KOG1026|consen 631 TRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS 710 (774)
T ss_pred hhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence 6899999999999999999996622 21 1111222347899999 334334444543221 1 111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCCC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFPY 809 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~~ 809 (818)
=.||++-.-.+...+.+..|+..+..|+..||+.+|++||+++||..+|+...+
T Consensus 711 n~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 711 NQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred hHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 123333222222234567788999999999999999999999999999998743
No 29
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.53 E-value=8.3e-15 Score=148.08 Aligned_cols=107 Identities=21% Similarity=0.277 Sum_probs=69.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCCCcc-------------hHHHHhcccCCC-------
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKHPQE-------------ILSLFSSTSDPH------- 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~~~~-------------~l~~~~~~~~~~------- 753 (818)
|+|||+.+.+++||||||+++.+..+ ...+.+||..||||||-..+ .+.+.+-..++.
T Consensus 207 PsNlLvNskGeVKicDFGVS~~lvnS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~ 284 (364)
T KOG0581|consen 207 PSNLLVNSKGEVKICDFGVSGILVNS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY 284 (364)
T ss_pred HHHeeeccCCCEEeccccccHHhhhh--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC
Confidence 99999999999999999999988654 44567899999999943332 222333332221
Q ss_pred ccccceecccCCCcCccchHH-HHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 754 ITLTYILDQRISPPKKQKIVQ-DIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 754 ~~~~~~~d~~l~~~~~~~~~~-~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
....+.++....++....+.+ .-.++....-.|+++||.+||+.+|.++
T Consensus 285 ~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 285 LDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 112233333333222112222 3344555556999999999999999764
No 30
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=1.4e-14 Score=140.08 Aligned_cols=111 Identities=17% Similarity=0.175 Sum_probs=73.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc-----------cCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST-----------SDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~-----------~~~~~~~~~ 758 (818)
|.||+||+++.+|++||||+|.++.+...++..+||+.||.|| ..+++ ..+.|+-. .+......+
T Consensus 156 PaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~ 235 (375)
T KOG0591|consen 156 PANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS 235 (375)
T ss_pred chheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH
Confidence 8899999999999999999999987776677889999999999 33443 33445422 222222222
Q ss_pred eecccCCCcCccch-HHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 759 ILDQRISPPKKQKI-VQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 759 ~~d~~l~~~~~~~~-~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
.-.+.-.++..+.+ .-.-..+.+|+-.|...||+.||+....++.+
T Consensus 236 L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 236 LCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred HHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 22222222322223 33345667788899999999999854444433
No 31
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.47 E-value=7.2e-14 Score=148.89 Aligned_cols=164 Identities=16% Similarity=0.235 Sum_probs=106.1
Q ss_pred ccchHHHHHHHhhhhhhcccc----CcEEEEEcCCCcEEEEEeccccc--cchhhhhHhhh-------------------
Q 003465 637 RIAFEEIIRATEDLISDIALE----LDVTAAFTKHGCLVAEYGSEQGR--SAFFKSFQNEA------------------- 691 (818)
Q Consensus 637 ~~~~~~l~~at~~f~~~~~ig----g~vy~~~~~~g~~vAvK~~~~~~--~~~~~~f~~E~------------------- 691 (818)
.+.++|+..+ ..|| |+||+|.+. | .||||++.... .+..+.|++||
T Consensus 388 eIp~~ev~l~-------~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~ 458 (678)
T KOG0193|consen 388 EIPPEEVLLG-------ERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM 458 (678)
T ss_pred ccCHHHhhcc-------ceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc
Confidence 4566665433 4566 999999974 4 49999765443 33567899999
Q ss_pred ----------------------------------------------cc---------ccccccCCCCcccccccccceec
Q 003465 692 ----------------------------------------------HV---------FNNILLNSEFEAFFGNFGVARLL 716 (818)
Q Consensus 692 ----------------------------------------------h~---------~~NILLd~~~~~ki~DFGla~~~ 716 (818)
|+ +.||+|+++.++||+||||+..-
T Consensus 459 ~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 459 NPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred CCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 21 78999999999999999998643
Q ss_pred cC--CCCCccccccccceeCCC--C----CCcc---h-----HHHH--hcccCCC--cc---ccceeccc-CCCcCccch
Q 003465 717 NS--DSSNRTLIAGTYRYIAPA--K----HPQE---I-----LSLF--SSTSDPH--IT---LTYILDQR-ISPPKKQKI 772 (818)
Q Consensus 717 ~~--~~~~~~~~~gt~gy~aPE--~----~~~~---~-----l~~~--~~~~~~~--~~---~~~~~d~~-l~~~~~~~~ 772 (818)
.. .+.......|..-||||| | .|+. + ++++ ....++. .. +.-++... ++.+.....
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~ 618 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIR 618 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhh
Confidence 22 222234556889999999 2 1211 2 2222 1222222 11 11112221 122221223
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCCC
Q 003465 773 VQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFPY 809 (818)
Q Consensus 773 ~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~~ 809 (818)
..+.+.+.+|...||..++++||.+.+++.+|+.+..
T Consensus 619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 619 SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 4677788899999999999999999999998887743
No 32
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.46 E-value=2.7e-13 Score=143.33 Aligned_cols=150 Identities=14% Similarity=0.083 Sum_probs=102.0
Q ss_pred CcEEEEEcCCCcEEEEEeccccccch-hhhhHhhh---------------------------------------------
Q 003465 658 LDVTAAFTKHGCLVAEYGSEQGRSAF-FKSFQNEA--------------------------------------------- 691 (818)
Q Consensus 658 g~vy~~~~~~g~~vAvK~~~~~~~~~-~~~f~~E~--------------------------------------------- 691 (818)
|+|..+....+..||||.++...... .++|.+|+
T Consensus 552 GEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ahea 631 (807)
T KOG1094|consen 552 GEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHEL 631 (807)
T ss_pred ceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccC
Confidence 99999998878999999877665444 47899998
Q ss_pred ----------------------------cc---ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCC--
Q 003465 692 ----------------------------HV---FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPA-- 736 (818)
Q Consensus 692 ----------------------------h~---~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE-- 736 (818)
|+ +.|+|+|.+|++||||||++|-+-.+. ......+-.+.|||||
T Consensus 632 pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsi 711 (807)
T KOG1094|consen 632 PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESI 711 (807)
T ss_pred cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHH
Confidence 22 789999999999999999999663332 2233445568999999
Q ss_pred --CCCcchHHHHhc-------------ccCCCccccceeccc-------CCCcCccchHHHHHHHHHHHHhccCCCCCCC
Q 003465 737 --KHPQEILSLFSS-------------TSDPHITLTYILDQR-------ISPPKKQKIVQDIALASIVALACLQSKPKSV 794 (818)
Q Consensus 737 --~~~~~~l~~~~~-------------~~~~~~~~~~~~d~~-------l~~~~~~~~~~~~~~~~~la~~C~~~~p~~R 794 (818)
.+.+..-+.|+. ..+..-.-.++++.. =.......+.-|+..+.+++++||..+-++|
T Consensus 712 llgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~R 791 (807)
T KOG1094|consen 712 LLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQR 791 (807)
T ss_pred HhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcC
Confidence 222222223321 111111112222211 1111112355678889999999999999999
Q ss_pred CChHHHHHHHccC
Q 003465 795 PTMQRVSQEFLKF 807 (818)
Q Consensus 795 P~m~~V~~~L~~~ 807 (818)
|++.+++.-|.+.
T Consensus 792 PsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 792 PSFEQLHLFLQED 804 (807)
T ss_pred CCHHHHHHHHHHh
Confidence 9999999988753
No 33
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=4.7e-14 Score=151.07 Aligned_cols=108 Identities=22% Similarity=0.301 Sum_probs=69.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcccC-----------CCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSSTSD-----------PHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~~~-----------~~~~~~~ 758 (818)
-+|++|+++|++||+|||||..+..+..-..+.+||+-|+||| +.... ..+.|+.... +...+.+
T Consensus 146 LGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke 225 (592)
T KOG0575|consen 146 LGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE 225 (592)
T ss_pred hhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH
Confidence 5899999999999999999999877655556789999999999 22222 4566764332 2222222
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
..+..-...+ ..+..--....+++..-++.+|.+||+..+|+.
T Consensus 226 ty~~Ik~~~Y-~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 226 TYNKIKLNEY-SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHHHhcCc-ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2221111111 001111122344566788999999999999984
No 34
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.44 E-value=3.7e-14 Score=150.22 Aligned_cols=152 Identities=18% Similarity=0.187 Sum_probs=108.3
Q ss_pred hhcccc----CcEEEEEcC-CCcEEEEEeccccccchhhhhHhhh-----------------------------------
Q 003465 652 SDIALE----LDVTAAFTK-HGCLVAEYGSEQGRSAFFKSFQNEA----------------------------------- 691 (818)
Q Consensus 652 ~~~~ig----g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~f~~E~----------------------------------- 691 (818)
-.+.+| |.||-|++. ....||||.++++.. ...+|..|+
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGN 349 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGN 349 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCcc
Confidence 345666 899999984 478999998877643 567788876
Q ss_pred --------------------------------------cc---ccccccCCCCcccccccccceeccCCCCCc-cccccc
Q 003465 692 --------------------------------------HV---FNNILLNSEFEAFFGNFGVARLLNSDSSNR-TLIAGT 729 (818)
Q Consensus 692 --------------------------------------h~---~~NILLd~~~~~ki~DFGla~~~~~~~~~~-~~~~gt 729 (818)
|+ +.|.|+.++..+||+||||+|++..+.... .+..--
T Consensus 350 LLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFP 429 (1157)
T KOG4278|consen 350 LLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFP 429 (1157)
T ss_pred HHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCc
Confidence 22 689999999999999999999997664322 122233
Q ss_pred cceeCCCCCCcc----hHHHHh------------cccCCCccc---cceecccCCCcCccchHHHHHHHHHHHHhccCCC
Q 003465 730 YRYIAPAKHPQE----ILSLFS------------STSDPHITL---TYILDQRISPPKKQKIVQDIALASIVALACLQSK 790 (818)
Q Consensus 730 ~gy~aPE~~~~~----~l~~~~------------~~~~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~ 790 (818)
+.|.|||.-++. .-+.|+ ...++...+ .++++...+-+ .+..|+..+.+++..||+.+
T Consensus 430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~---~PeGCPpkVYeLMraCW~Ws 506 (1157)
T KOG4278|consen 430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMD---GPEGCPPKVYELMRACWNWS 506 (1157)
T ss_pred ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccccc---CCCCCCHHHHHHHHHHhcCC
Confidence 789999943332 222332 233343333 33344433332 36678999999999999999
Q ss_pred CCCCCChHHHHHHHccC
Q 003465 791 PKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 791 p~~RP~m~~V~~~L~~~ 807 (818)
|.+||+++|+.+.++.+
T Consensus 507 PsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 507 PSDRPSFAEIHQAFETM 523 (1157)
T ss_pred cccCccHHHHHHHHHHH
Confidence 99999999999999887
No 35
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=4.4e-13 Score=137.86 Aligned_cols=117 Identities=20% Similarity=0.284 Sum_probs=79.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC----CccccccccceeCCC-------------CCCcc----hHHHHh--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS----NRTLIAGTYRYIAPA-------------KHPQE----ILSLFS--STS 750 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~----~~~~~~gt~gy~aPE-------------~~~~~----~l~~~~--~~~ 750 (818)
+.|||+..++...|||+|||-....+.. ....-+||-+||||| ++-.| .++.|. ++.
T Consensus 344 SKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc 423 (513)
T KOG2052|consen 344 SKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRC 423 (513)
T ss_pred cccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999987655432 234567999999999 11122 455563 111
Q ss_pred CC-----------------Ccc---ccce-ecccCCCcCc--cchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 751 DP-----------------HIT---LTYI-LDQRISPPKK--QKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 751 ~~-----------------~~~---~~~~-~d~~l~~~~~--~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.. +.+ +.++ -..++++... ....+++..+.+++..||..+|..|-|+-.+-+.|.++
T Consensus 424 ~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 424 ESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred hcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 10 011 1111 1233333321 22456788899999999999999999999999999888
Q ss_pred CCc
Q 003465 808 PYL 810 (818)
Q Consensus 808 ~~~ 810 (818)
...
T Consensus 504 ~~~ 506 (513)
T KOG2052|consen 504 SNS 506 (513)
T ss_pred hcC
Confidence 543
No 36
>PLN03150 hypothetical protein; Provisional
Probab=99.43 E-value=4.6e-13 Score=154.62 Aligned_cols=108 Identities=26% Similarity=0.337 Sum_probs=87.0
Q ss_pred CCEEECcCCcCCccCChhhhcCccccccccccEEECCCCcCcccCCcccccccCCcccCChhhcCCcCCCEEECCCCcCc
Q 003465 439 LHELDLSLNFISGMTPPQHFKQKHSIRDRLLTYVNHQFNRLSGQIPMTIGGLSKLSGSVPSEIGNCSGLLNVTLSNNSLD 518 (818)
Q Consensus 439 L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~L~~l~ls~n~l~g~~p~~~~~~~~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 518 (818)
++.|+|++|.+.|.+|..+..+. .|+.|++++|.++|.+|. .++.+++|+.|||++|+++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~------~L~~L~Ls~N~l~g~iP~--------------~~~~l~~L~~LdLs~N~ls 479 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLR------HLQSINLSGNSIRGNIPP--------------SLGSITSLEVLDLSYNSFN 479 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCC------CCCEEECCCCcccCcCCh--------------HHhCCCCCCEEECCCCCCC
Confidence 66778888888888777776666 778888888887766665 7888899999999999999
Q ss_pred cCCcccccCCCCCCeeeCcCCCCcccCCcccc---cCCCCCcccCcCCCCC
Q 003465 519 GTIPLEMGKIIFLEYLDLSYNNIPGTVPEFIN---RIMPADLVPMINFSIS 566 (818)
Q Consensus 519 ~~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~---~~~~~~~~~~n~~~~~ 566 (818)
|.+|..++++++|+.|+|++|+++|.+|.... .......+.+|+.+|.
T Consensus 480 g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~ 530 (623)
T PLN03150 480 GSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCG 530 (623)
T ss_pred CCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccC
Confidence 99999999999999999999999999998322 2234456788999993
No 37
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.41 E-value=1e-13 Score=160.19 Aligned_cols=114 Identities=15% Similarity=0.175 Sum_probs=76.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCcccccc--ccceeCCC----CCC---cc----hHHHHh-----cccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAG--TYRYIAPA----KHP---QE----ILSLFS-----STSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~g--t~gy~aPE----~~~---~~----~l~~~~-----~~~~~~~~ 755 (818)
++|+|||+...+||+||||||.+-..........+ -+.||||| ... +| .+.-|. ...+++.+
T Consensus 830 aRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~ 909 (1025)
T KOG1095|consen 830 ARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS 909 (1025)
T ss_pred hhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc
Confidence 78999999999999999999955332211111112 25899999 111 22 223331 23334433
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
-.+++...+.+...+.+..|+..+.+|+..||+.+|++||++..+++.+..+
T Consensus 910 n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 910 NFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred hHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 3444443333333344667888999999999999999999999999988887
No 38
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.40 E-value=3.1e-13 Score=148.10 Aligned_cols=114 Identities=18% Similarity=0.200 Sum_probs=76.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCC----CCCcchHHHHhc------------ccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPA----KHPQEILSLFSS------------TSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE----~~~~~~l~~~~~------------~~~~~~~ 755 (818)
++|||+.+--.+||+|||+||++..+... .....-.+.|||-| +..+..-+.|+. ..+....
T Consensus 826 aRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~ 905 (1177)
T KOG1025|consen 826 ARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP 905 (1177)
T ss_pred hhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence 79999999999999999999999766433 23344446788888 222222233332 2222223
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..+|-|---.+...+.+..|...+..+++.||..|++.||++++...++.++
T Consensus 906 ~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 906 AEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred HHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 3333221111222234667888999999999999999999999999988877
No 39
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.39 E-value=4.4e-13 Score=142.55 Aligned_cols=116 Identities=12% Similarity=0.124 Sum_probs=84.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC----CCCcchHHHHhc------------ccCCCccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA----KHPQEILSLFSS------------TSDPHITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE----~~~~~~l~~~~~------------~~~~~~~~ 756 (818)
.+|||+.+.-.+|++||||+|.+++++.. .+..+-.+.||||| |+.+..-+.|.. ..+....-
T Consensus 519 aRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN 598 (974)
T KOG4257|consen 519 ARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN 598 (974)
T ss_pred hhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc
Confidence 68999999999999999999999766432 34444557899999 555443333431 22222222
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCCC
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFPY 809 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~~ 809 (818)
.+++-..-.+...+.+..|+..+..++-.||+.+|.+||++.|+...|..+.+
T Consensus 599 sDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 599 SDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred cceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 34444444444456678899999999999999999999999999999888743
No 40
>PLN03150 hypothetical protein; Provisional
Probab=99.38 E-value=9.5e-13 Score=152.06 Aligned_cols=150 Identities=30% Similarity=0.445 Sum_probs=111.3
Q ss_pred CCHHHHHHHHcCCCC--C--CCCCCCCCCCCCC----CccceeeCCCCCEEEEEecCCccccCCCCCCCcCCCCCCcEEE
Q 003465 36 PIRLEREALLNTGWW--N--NSREKASNHSDHC----KWAGIVCNLNGSIIRISLSGVNGIRGKLDQFNFSCFPNLESFR 107 (818)
Q Consensus 36 ~~~~~~~~ll~~~~~--~--~~~~~~~~~~~~c----~w~gv~c~~~~~v~~l~l~~~~g~~~~l~~~~l~~l~~L~~L~ 107 (818)
+.+.|.+||+..+.. . ..+|. +..|| .|.||.|+.... .....++.|+
T Consensus 369 t~~~~~~aL~~~k~~~~~~~~~~W~---g~~C~p~~~~w~Gv~C~~~~~---------------------~~~~~v~~L~ 424 (623)
T PLN03150 369 TLLEEVSALQTLKSSLGLPLRFGWN---GDPCVPQQHPWSGADCQFDST---------------------KGKWFIDGLG 424 (623)
T ss_pred cCchHHHHHHHHHHhcCCcccCCCC---CCCCCCcccccccceeeccCC---------------------CCceEEEEEE
Confidence 456688888764321 1 23674 33332 799999953110 0011357788
Q ss_pred cCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCC
Q 003465 108 IWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVG 187 (818)
Q Consensus 108 L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 187 (818)
|++|.+.+.+|..++++++|+.|+|++|.+.+.+|..++.+++|++|+|++|++++.+|..++++++|++|+|++|.+++
T Consensus 425 L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g 504 (623)
T PLN03150 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSG 504 (623)
T ss_pred CCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccc
Confidence 88888888889889999999999999999988888888889999999999999888888888888888888888888888
Q ss_pred CCccCCCCC-CCCcEEEcccCcC
Q 003465 188 PIPFTLGHL-TQLTTLKLFSNQI 209 (818)
Q Consensus 188 ~~~~~l~~l-~~L~~L~L~~n~l 209 (818)
.+|..+..+ .++..+++.+|..
T Consensus 505 ~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 505 RVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred cCChHHhhccccCceEEecCCcc
Confidence 888777643 3556666666643
No 41
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=8e-13 Score=140.59 Aligned_cols=104 Identities=21% Similarity=0.367 Sum_probs=69.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcccC---------C---Ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSSTSD---------P---HITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~~~---------~---~~~~~ 757 (818)
+.||||+.++.+||+|||++..+.......++.+||+.||||| +++++ .++.|.-+.. + +..+.
T Consensus 397 SDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr 476 (550)
T KOG0578|consen 397 SDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 476 (550)
T ss_pred cceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH
Confidence 7999999999999999999998876665667789999999999 55555 4455542211 1 10000
Q ss_pred --c-e---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 --Y-I---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 --~-~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+ + -.|.+... +....+...++. +|++.|+++||++.|+++
T Consensus 477 AlyLIa~ng~P~lk~~--~klS~~~kdFL~---~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 477 ALYLIATNGTPKLKNP--EKLSPELKDFLD---RCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHHhhcCCCCcCCc--cccCHHHHHHHH---HHhhcchhcCCCHHHHhc
Confidence 0 0 01122111 112234444554 999999999999999875
No 42
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=1.8e-12 Score=133.56 Aligned_cols=106 Identities=22% Similarity=0.338 Sum_probs=67.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhc---------ccCCC-----cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSS---------TSDPH-----IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~---------~~~~~-----~~ 755 (818)
+.|||+.+++.+|++|||++..+.....-..+.+||+.||||| ...++ ..+-|.- ...+. .+
T Consensus 139 aanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr 218 (467)
T KOG0201|consen 139 AANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR 218 (467)
T ss_pred ccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce
Confidence 7899999999999999999998876655456789999999999 22233 3334431 11111 11
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+..++-+.-.+.. ....-..+-+.+-.|++.+|+.||++.++++
T Consensus 219 vlflIpk~~PP~L---~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 219 VLFLIPKSAPPRL---DGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred EEEeccCCCCCcc---ccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 1122221111111 1122223444555999999999999999874
No 43
>PHA02988 hypothetical protein; Provisional
Probab=99.33 E-value=1.3e-12 Score=137.40 Aligned_cols=112 Identities=12% Similarity=0.088 Sum_probs=70.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC-----CC-cchHHHHhc---------c--cCCCccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK-----HP-QEILSLFSS---------T--SDPHITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~-----~~-~~~l~~~~~---------~--~~~~~~~ 756 (818)
|+|||+|+++++||+|||+++.+... .....||..|+|||. .. +...+.|+. . .+.....
T Consensus 151 p~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~ 227 (283)
T PHA02988 151 SVSFLVTENYKLKIICHGLEKILSSP---PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT 227 (283)
T ss_pred hhhEEECCCCcEEEcccchHhhhccc---cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH
Confidence 79999999999999999999876432 223468999999991 11 112223321 1 1112111
Q ss_pred cceecccCCCc-CccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 757 TYILDQRISPP-KKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 757 ~~~~d~~l~~~-~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
.++.+..+... ....+..+...+.+++.+||+.+|++||+|.||++.|+...
T Consensus 228 ~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 228 KEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 22222111110 00112234456778888999999999999999999998764
No 44
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=1.7e-12 Score=132.45 Aligned_cols=108 Identities=19% Similarity=0.192 Sum_probs=69.9
Q ss_pred ccccccCCC---CcccccccccceeccCCCCCccccccccceeCCC---CCCc----chHHHHhcccC---------CC-
Q 003465 694 FNNILLNSE---FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQ----EILSLFSSTSD---------PH- 753 (818)
Q Consensus 694 ~~NILLd~~---~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~----~~l~~~~~~~~---------~~- 753 (818)
|.||||..+ ...||+|||+||.... .+-+.+.|||++|+||| ...+ ..++.|+.... |.
T Consensus 304 PeNILl~~~~e~~llKItDFGlAK~~g~-~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS 382 (475)
T KOG0615|consen 304 PENILLSNDAEDCLLKITDFGLAKVSGE-GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFS 382 (475)
T ss_pred cceEEeccCCcceEEEecccchhhcccc-ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcc
Confidence 999999665 8899999999998763 34566789999999999 1111 24556754322 11
Q ss_pred ccccc--eecccCCCcC---ccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 754 ITLTY--ILDQRISPPK---KQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 754 ~~~~~--~~d~~l~~~~---~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
....+ +.++...+.+ .+.+.+--++...++-+.+..||++||+..|+++
T Consensus 383 ~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 383 EEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 00111 1122222221 1223344456677888999999999999999874
No 45
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.32 E-value=1.6e-12 Score=135.24 Aligned_cols=114 Identities=18% Similarity=0.252 Sum_probs=71.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc----------ccCCC--cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDPH--ITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~~--~~~~ 757 (818)
++||+++++..+|++|||+++....+........++.+|+||| +.+....+.|.. ...+. ....
T Consensus 132 ~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~ 211 (261)
T cd05148 132 ARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH 211 (261)
T ss_pred cceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 8999999999999999999987754433333445778999999 222212223321 11111 1111
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
++++........+.+..+...+.+++.+|++.+|++||+|+++.+.|+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 212 EVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 12111111111011233445677899999999999999999999999864
No 46
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.31 E-value=2.9e-12 Score=123.45 Aligned_cols=43 Identities=33% Similarity=0.410 Sum_probs=37.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|.|+|+++++..|||||||||.+.......+..+-|.-|-|||
T Consensus 129 PnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPE 171 (318)
T KOG0659|consen 129 PNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPE 171 (318)
T ss_pred ccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChH
Confidence 8999999999999999999999876555444447889999999
No 47
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=3.8e-12 Score=131.22 Aligned_cols=109 Identities=19% Similarity=0.246 Sum_probs=66.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---c-cccccccceeCCCC--C---Ccc-hHHHHhc---------ccCCC-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---R-TLIAGTYRYIAPAK--H---PQE-ILSLFSS---------TSDPH- 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~-~~~~gt~gy~aPE~--~---~~~-~l~~~~~---------~~~~~- 753 (818)
++|||||+++.+|++|||.+..+-..... . ...+||+.|||||- . -++ ..+.|.. ...+.
T Consensus 154 AgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~ 233 (516)
T KOG0582|consen 154 AGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS 233 (516)
T ss_pred cccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence 89999999999999999998877443221 1 45789999999991 1 122 2333432 22221
Q ss_pred -ccccceecccCCCcCc---------cchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 754 -ITLTYILDQRISPPKK---------QKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 754 -~~~~~~~d~~l~~~~~---------~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
....+++-..+.+... +.....-..+.++.-.|++.||++|||+++.++
T Consensus 234 k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 234 KYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1122233223322220 001112234566777999999999999998763
No 48
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=2.6e-12 Score=139.49 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=74.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcc-----------cCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSST-----------SDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~-----------~~~~~~~~~ 758 (818)
-.|||||.++++|||||||+|..--....+++.+||+-||||| ...+..+++|+.. .++...-.+
T Consensus 496 LdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee 575 (694)
T KOG0694|consen 496 LDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE 575 (694)
T ss_pred hhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 5799999999999999999997643445677899999999999 2233367788632 334444566
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCCh
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTM 797 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 797 (818)
+.|..+.... ..+.-...+.+.|+.+-+..+|++|-.+
T Consensus 576 ~FdsI~~d~~-~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 576 VFDSIVNDEV-RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHhcCCC-CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 6666664432 2234445566677778899999999888
No 49
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.29 E-value=4.8e-12 Score=122.10 Aligned_cols=103 Identities=20% Similarity=0.250 Sum_probs=64.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC------Ccc-hHHHHhc---------ccCCC-c--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH------PQE-ILSLFSS---------TSDPH-I-- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~------~~~-~l~~~~~---------~~~~~-~-- 754 (818)
|||||+|+.++.|++|||++..+-++ ...+..+|-..||||||- .+| -.+.|.. ..++. +
T Consensus 220 PSNILlDe~GniKlCDFGIsGrlvdS-kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~ 298 (391)
T KOG0983|consen 220 PSNILLDERGNIKLCDFGISGRLVDS-KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK 298 (391)
T ss_pred ccceEEccCCCEEeecccccceeecc-cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC
Confidence 99999999999999999999877444 334566899999999932 122 2334432 22221 0
Q ss_pred ----cccceec---ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 755 ----TLTYILD---QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 755 ----~~~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+..+++ |.+.+. ..--..+.+....|+..|+.+||...++++
T Consensus 299 tdFe~ltkvln~ePP~L~~~-----~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 299 TDFEVLTKVLNEEPPLLPGH-----MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred ccHHHHHHHHhcCCCCCCcc-----cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 0112222 122111 111234555666999999999999887654
No 50
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.27 E-value=1e-12 Score=133.00 Aligned_cols=99 Identities=16% Similarity=0.170 Sum_probs=64.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc-----------cCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST-----------SDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~-----------~~~~~~~~~ 758 (818)
|+|||||+++++|++||||+|..-.++..+.+.+||+-||||| +.+++ .+++|+-. .+......+
T Consensus 153 PENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~ 232 (357)
T KOG0598|consen 153 PENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK 232 (357)
T ss_pred HHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH
Confidence 8999999999999999999997766666677799999999999 55555 55666532 222223334
Q ss_pred eecccCCCcCc---cchHHHHHHHHHHHHhccCCCCCCCC
Q 003465 759 ILDQRISPPKK---QKIVQDIALASIVALACLQSKPKSVP 795 (818)
Q Consensus 759 ~~d~~l~~~~~---~~~~~~~~~~~~la~~C~~~~p~~RP 795 (818)
+.|..+.++.. .....++..++ ..-+..+|++|-
T Consensus 233 ~~~~I~~~k~~~~p~~ls~~ardll---~~LL~rdp~~RL 269 (357)
T KOG0598|consen 233 MYDKILKGKLPLPPGYLSEEARDLL---KKLLKRDPRQRL 269 (357)
T ss_pred HHHHHhcCcCCCCCccCCHHHHHHH---HHHhccCHHHhc
Confidence 44443333210 11223333333 355678888885
No 51
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.27 E-value=2.6e-12 Score=135.42 Aligned_cols=110 Identities=18% Similarity=0.266 Sum_probs=75.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc--------hHHHHhcc--c--CCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE--------ILSLFSST--S--DPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~--------~l~~~~~~--~--~~~~~~~~ 758 (818)
+-|||+..+-.+||+|||-+|....- +.....+||+.||||| ..|.. .++-|..- . +.+..-..
T Consensus 240 SPNiLIs~~d~VKIsDFGTS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA 318 (904)
T KOG4721|consen 240 SPNILISYDDVVKISDFGTSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA 318 (904)
T ss_pred CCceEeeccceEEeccccchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe
Confidence 67999999999999999999987554 3445689999999999 33432 33344211 1 11111111
Q ss_pred ee----cccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 759 IL----DQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 759 ~~----d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
|+ ...+. .+.+..|+..+.-++..||+..|..||++++++..|+=.
T Consensus 319 IIwGVGsNsL~---LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 319 IIWGVGSNSLH---LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred eEEeccCCccc---ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 10 11111 133667788888888999999999999999999988754
No 52
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.27 E-value=4.6e-12 Score=124.08 Aligned_cols=43 Identities=33% Similarity=0.356 Sum_probs=38.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|.|||+..++.+|++|||+||.+.......|.-+.|..|-|||
T Consensus 129 PENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPE 171 (396)
T KOG0593|consen 129 PENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPE 171 (396)
T ss_pred hhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChh
Confidence 8999999999999999999999976555667778899999999
No 53
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=6.7e-12 Score=131.36 Aligned_cols=43 Identities=28% Similarity=0.321 Sum_probs=37.3
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
.+|||||.++..||||||||++...... ..|..+-|..|-|||
T Consensus 246 ~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPE 289 (560)
T KOG0600|consen 246 GSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPE 289 (560)
T ss_pred ccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChH
Confidence 7999999999999999999998866543 356667899999999
No 54
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.26 E-value=2.9e-12 Score=145.08 Aligned_cols=110 Identities=20% Similarity=0.254 Sum_probs=68.9
Q ss_pred ccccccCCCCcccccccccceeccCC--CCCccccccccceeCCC---CCCc-chHHHHhc-----------ccCCCccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD--SSNRTLIAGTYRYIAPA---KHPQ-EILSLFSS-----------TSDPHITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~--~~~~~~~~gt~gy~aPE---~~~~-~~l~~~~~-----------~~~~~~~~ 756 (818)
|+|||+++++.+||+|||+++..... ........||++|+||| ..+. ...+.|+. ..+.....
T Consensus 171 P~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~ 250 (496)
T PTZ00283 171 SANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM 250 (496)
T ss_pred HHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence 89999999999999999999876433 12234567999999999 2222 22333431 11122222
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.++++..+.+...+.+......+.+++..|++.+|++||++.++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 251 EEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 23333322221111122233456678889999999999999998753
No 55
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=3.2e-12 Score=132.74 Aligned_cols=42 Identities=31% Similarity=0.342 Sum_probs=35.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|.|||+.....+|||||||||.+.. +..-|.-+.|..|-|||
T Consensus 138 PENiLi~~~~~iKiaDFGLARev~S-kpPYTeYVSTRWYRAPE 179 (538)
T KOG0661|consen 138 PENILISGNDVIKIADFGLAREVRS-KPPYTEYVSTRWYRAPE 179 (538)
T ss_pred hhheEecccceeEeccccccccccc-CCCcchhhhcccccchH
Confidence 9999999999999999999998743 33445667899999999
No 56
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.25 E-value=1e-11 Score=129.19 Aligned_cols=110 Identities=19% Similarity=0.234 Sum_probs=67.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCCC----CCcchHHHHh---------c-ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPAK----HPQEILSLFS---------S-TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE~----~~~~~l~~~~---------~-~~~~~--~~~ 756 (818)
|+||++++++.+||+|||+++........ .....++.+|+|||. .++...+.|+ . ...+. ...
T Consensus 131 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 210 (261)
T cd05068 131 ARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN 210 (261)
T ss_pred cceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 89999999999999999999987533211 222334568999992 1111112221 1 11111 111
Q ss_pred cce---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 757 TYI---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 757 ~~~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.++ ++...... .+......+.+++.+|++.+|++||+|.++.+.|+.
T Consensus 211 ~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 211 AEVLQQVDQGYRMP---CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHHHHcCCCCC---CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 111 11111111 122344567788899999999999999999999985
No 57
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.25 E-value=7.5e-12 Score=130.60 Aligned_cols=114 Identities=18% Similarity=0.219 Sum_probs=68.3
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhc----------ccCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~--~~~ 755 (818)
|+||++++++.+|++|||+++....... ......++..|+|||. ..+...+.|.. ...+ ...
T Consensus 134 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~ 213 (266)
T cd05033 134 ARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS 213 (266)
T ss_pred cceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC
Confidence 8999999999999999999998752211 1223445678999992 11111122211 1111 111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..++.+........+.+..+...+.+++..|++.+|++||+|.||+++|+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 214 NQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111111111100011223345677899999999999999999999999864
No 58
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.25 E-value=1.5e-12 Score=126.70 Aligned_cols=108 Identities=25% Similarity=0.289 Sum_probs=66.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc---------cCCCcc---cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST---------SDPHIT---LT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~---------~~~~~~---~~ 757 (818)
+.||||+-++.||++|||+|..+.+......++.||+.||||| .-.++ ..+.|.-. ..+... +.
T Consensus 157 AGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR 236 (502)
T KOG0574|consen 157 AGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR 236 (502)
T ss_pred cccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc
Confidence 7899999999999999999998866555556788999999999 11112 22334321 111110 11
Q ss_pred ce-ecccC-CCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YI-LDQRI-SPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~-~d~~l-~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+ +-|.- .+.+ ..+.+--..+-+....|+-..|++|-|+.++.+
T Consensus 237 AIFMIPT~PPPTF-~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 237 AIFMIPTKPPPTF-KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred eeEeccCCCCCCC-CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 11 11111 1111 123333334555666999999999999877654
No 59
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.24 E-value=1.7e-12 Score=125.04 Aligned_cols=107 Identities=21% Similarity=0.258 Sum_probs=73.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC--------CCCcc--hHHHHhcccC---------CCc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA--------KHPQE--ILSLFSSTSD---------PHI 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE--------~~~~~--~l~~~~~~~~---------~~~ 754 (818)
|.|||+|++++.||+|||+|..+..+. .-...+||+||+||| ..|.- .++.|+.... +..
T Consensus 151 pENILlddn~~i~isDFGFa~~l~~Ge-kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 151 PENILLDDNMNIKISDFGFACQLEPGE-KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW 229 (411)
T ss_pred hhheeeccccceEEeccceeeccCCch-hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence 899999999999999999999886553 345689999999999 22221 5677764321 111
Q ss_pred c------ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 755 T------LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 755 ~------~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
. +.-++........ +.+.+--..+-+++.+|++.||.+|-|..|+++
T Consensus 230 HRkQmlMLR~ImeGkyqF~s-peWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 230 HRKQMLMLRMIMEGKYQFRS-PEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHHHHHHHhcccccCC-cchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1 1112222322222 334444556667888999999999999999874
No 60
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.23 E-value=1.1e-11 Score=128.88 Aligned_cols=111 Identities=15% Similarity=0.233 Sum_probs=67.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCCC----CCcchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~~~ 756 (818)
|+||++++++.+|++|||+++....... ......++.+|+|||. ......+.|+. ...+. ...
T Consensus 131 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 210 (261)
T cd05072 131 AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN 210 (261)
T ss_pred hhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence 8999999999999999999987654321 2233456788999992 11111222321 11111 100
Q ss_pred cceec---ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 757 TYILD---QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 757 ~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.++.. ....... .......+.+++.+|++.+|++||+|.++.+.|+.+
T Consensus 211 ~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 211 SDVMSALQRGYRMPR---MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 01111 1111111 112334567888899999999999999999999863
No 61
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.22 E-value=1.6e-11 Score=129.45 Aligned_cols=114 Identities=13% Similarity=0.171 Sum_probs=70.6
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCCC----CCcchHHHHhcc----------cCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPAK----HPQEILSLFSST----------SDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE~----~~~~~l~~~~~~----------~~~--~~~ 755 (818)
|+||++++++.+||+|||+++...... .......++..|+|||. ..+...+.|+.. ..+ ...
T Consensus 152 p~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05048 152 ARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS 231 (283)
T ss_pred cceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 899999999999999999998764322 12334567889999992 111122333211 111 111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..++............+..+...+.+++..||+.+|++||+++||+++|+++
T Consensus 232 ~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 232 NQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1111111001111111334556778899999999999999999999999863
No 62
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.21 E-value=1.8e-11 Score=129.04 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=69.5
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCCC----CCcchHHHHhc----------ccCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~--~~~ 755 (818)
|+||++++++.+||+|||+++.+.... .......+++.|+|||. .++...+.|+. ...+ ...
T Consensus 152 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 231 (283)
T cd05091 152 TRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 231 (283)
T ss_pred hhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 899999999999999999998764322 12234456789999991 11112222321 1111 111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
..++++........+.+..+...+.+++..|++.+|++||+|.+|++.|+.
T Consensus 232 ~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 232 NQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 112222211111111123345567788999999999999999999999874
No 63
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.21 E-value=1.5e-11 Score=128.01 Aligned_cols=111 Identities=18% Similarity=0.249 Sum_probs=68.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC----CCCcchHHHHhc----------c--cCCCccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA----KHPQEILSLFSS----------T--SDPHITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~--~~~~~~~ 756 (818)
|+||++++++.+|++|||+++........ .....++.+|+||| ..++...+.|+. . .++....
T Consensus 132 p~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~ 211 (263)
T cd05052 132 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 211 (263)
T ss_pred cceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 89999999999999999999876543221 12233567899999 222222223321 1 1111111
Q ss_pred cce---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 757 TYI---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 757 ~~~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.+. +........ +......+.+++.+|++.+|++||+|.+++++|+.+
T Consensus 212 ~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 212 SQVYELLEKGYRMER---PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHHHCCCCCCC---CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111 111111111 222345677788899999999999999999999864
No 64
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.21 E-value=2.2e-11 Score=126.17 Aligned_cols=112 Identities=14% Similarity=0.134 Sum_probs=66.1
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCCC----CCcchHHHHhc----------ccCC--Cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDP--HITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~--~~~~ 756 (818)
|+||++++++.+|++|||+++....... ......++.+|+|||. ......+.|+. ...+ ....
T Consensus 128 p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~ 207 (256)
T cd05114 128 ARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN 207 (256)
T ss_pred cceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 8999999999999999999986643221 2233456678999992 11112222321 1111 1111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.+.+.....+.....+......+.+++.+|++.+|++||+|.++++.|.
T Consensus 208 ~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 208 YEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111111111100111122345778999999999999999999999873
No 65
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.21 E-value=7.3e-12 Score=132.22 Aligned_cols=105 Identities=25% Similarity=0.298 Sum_probs=67.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcccC---------C--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSSTSD---------P--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~~~---------~--~~~~~~ 758 (818)
|+||||+..+++|++|||+||.+....+.-+.+.||+-||||| ..|++ ..+-|+-... + ...+.+
T Consensus 128 PqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~ 207 (808)
T KOG0597|consen 128 PQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ 207 (808)
T ss_pred cceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 8999999999999999999999887777778999999999999 56666 4444542211 1 112222
Q ss_pred eecccCCCcCc--cchHHHHHHHHHHHHhccCCCCCCCCChHHHH
Q 003465 759 ILDQRISPPKK--QKIVQDIALASIVALACLQSKPKSVPTMQRVS 801 (818)
Q Consensus 759 ~~d~~l~~~~~--~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~ 801 (818)
.+...+..+.. ..-..+...+++ --+..||..|-+..+..
T Consensus 208 Lv~~I~~d~v~~p~~~S~~f~nfl~---gLL~kdP~~RltW~~Ll 249 (808)
T KOG0597|consen 208 LVKSILKDPVKPPSTASSSFVNFLQ---GLLIKDPAQRLTWTDLL 249 (808)
T ss_pred HHHHHhcCCCCCcccccHHHHHHHH---HHhhcChhhcccHHHHh
Confidence 22222221110 011122333333 45689999998887765
No 66
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.20 E-value=3.1e-11 Score=133.50 Aligned_cols=197 Identities=41% Similarity=0.604 Sum_probs=86.2
Q ss_pred EEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCC-CCcEEEcccCcCCccCCccccCCCCCCEEEccCC
Q 003465 153 ELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLT-QLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGN 231 (818)
Q Consensus 153 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 231 (818)
.|++..|.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4555555543 12223334455555555555555 3333333442 5555555555554 22233444445555555554
Q ss_pred cCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCch
Q 003465 232 KLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPP 311 (818)
Q Consensus 232 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 311 (818)
++.. ++......+.|+.|++++|++. .+|........|++|.+++|.+. ..+.
T Consensus 174 ~l~~-l~~~~~~~~~L~~L~ls~N~i~-------------------------~l~~~~~~~~~L~~l~~~~N~~~-~~~~ 226 (394)
T COG4886 174 DLSD-LPKLLSNLSNLNNLDLSGNKIS-------------------------DLPPEIELLSALEELDLSNNSII-ELLS 226 (394)
T ss_pred hhhh-hhhhhhhhhhhhheeccCCccc-------------------------cCchhhhhhhhhhhhhhcCCcce-ecch
Confidence 4442 2222223344444444444444 22322222333444444444221 1223
Q ss_pred hhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCC
Q 003465 312 TLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIP 382 (818)
Q Consensus 312 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 382 (818)
.+..+.++..|.+.+|++.. ++..++.+++++.|++++|.++.... ++.+.+++.|++++|.+....+
T Consensus 227 ~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 227 SLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred hhhhcccccccccCCceeee-ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 34444444444444444431 23344444555555555555543222 4455555555555555554433
No 67
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.20 E-value=2.4e-11 Score=132.34 Aligned_cols=110 Identities=18% Similarity=0.179 Sum_probs=66.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCCC-------c--chHHHHhcc---------cCCCc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKHP-------Q--EILSLFSST---------SDPHI- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~~-------~--~~l~~~~~~---------~~~~~- 754 (818)
++|||+++++.+||+|||+++.+..........+||.+|+|||.-. . ...+.|+.. ..+..
T Consensus 196 p~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 275 (353)
T PLN00034 196 PSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV 275 (353)
T ss_pred HHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999999999998754433344567999999999210 0 022334321 11110
Q ss_pred -cccc---eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 755 -TLTY---ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 755 -~~~~---~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
...+ .+..................+.+++..|++.+|++||++.||++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 276 GRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 000000000001111223456677889999999999999999865
No 68
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.19 E-value=3.8e-12 Score=132.19 Aligned_cols=111 Identities=20% Similarity=0.238 Sum_probs=63.3
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHh------------cccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFS------------STSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~------------~~~~~~~~ 755 (818)
++||++|+++.+||+|||+++....... ......+...|+||| ..++..-+.|+ ...+.+..
T Consensus 131 ~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~ 210 (259)
T PF07714_consen 131 PSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD 210 (259)
T ss_dssp GGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7899999999999999999998732221 123345778999999 22222112221 11122211
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
..++......+...+.+..+...+.+++..||+.+|++||+|.+++++|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 211 NEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1111111111111111223455677888999999999999999999986
No 69
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.19 E-value=3.4e-11 Score=128.29 Aligned_cols=113 Identities=12% Similarity=0.074 Sum_probs=67.4
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC---CCc-chHHHHhcc-----------cCCCc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK---HPQ-EILSLFSST-----------SDPHI-- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~---~~~-~~l~~~~~~-----------~~~~~-- 754 (818)
|+|||+++++.+||+|||+++.+..... ......++..|+|||. .+. ...+.|+.. ..+..
T Consensus 166 p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 245 (304)
T cd05096 166 TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL 245 (304)
T ss_pred hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC
Confidence 8999999999999999999987643321 1234456889999991 111 122223211 11110
Q ss_pred cccceecc-------cCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 755 TLTYILDQ-------RISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 755 ~~~~~~d~-------~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
...++++. .........+..+...+.+++.+|++.+|++||+|.+|++.|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 246 TDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 11111100 00000000112334567889999999999999999999999863
No 70
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=3e-11 Score=128.07 Aligned_cols=99 Identities=19% Similarity=0.266 Sum_probs=66.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC-------CCCcchHHHHhcc---------cCCCcccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA-------KHPQEILSLFSST---------SDPHITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE-------~~~~~~l~~~~~~---------~~~~~~~~ 757 (818)
+.||||.+.+.+|++|||-|-+... ....+||+.||||| ....+.++.|+-+ ..+-.++.
T Consensus 154 AGNILLse~g~VKLaDFGSAsi~~P----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN 229 (948)
T KOG0577|consen 154 AGNILLSEPGLVKLADFGSASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 229 (948)
T ss_pred ccceEecCCCeeeeccccchhhcCc----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch
Confidence 7899999999999999998876543 34578999999999 2222355666421 11111111
Q ss_pred ---------ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 ---------YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ---------~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+--.|.+... .+.+....+++ .|++.-|.+|||..+.++
T Consensus 230 AMSALYHIAQNesPtLqs~---eWS~~F~~Fvd---~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 230 AMSALYHIAQNESPTLQSN---EWSDYFRNFVD---SCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHHHHHHhcCCCCCCCc---hhHHHHHHHHH---HHHhhCcccCCcHHHHhh
Confidence 1112344322 25666666666 999999999999887654
No 71
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.18 E-value=2.6e-11 Score=134.11 Aligned_cols=179 Identities=36% Similarity=0.554 Sum_probs=82.2
Q ss_pred CCCCcEEECcCCCCCCCCccccCCCC-CCCEEEccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEE
Q 003465 148 LNNLVELYLSRSNLNGPIPSTLGHLT-RLSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEV 226 (818)
Q Consensus 148 l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 226 (818)
++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|++. .+|...+.+++|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 344444444444444 3333333332 4455555554444 22233444455555555555544 222222244455555
Q ss_pred EccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCC
Q 003465 227 DLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLF 306 (818)
Q Consensus 227 ~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 306 (818)
++++|++. .+|........|++|.+++|.+. ..+..+..+.++..+.+.+|++.. ++..++.+++++.|++++|.++
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceecccccccc
Confidence 55555544 22332233334555555555322 223334445555555555555442 2344455555555555555554
Q ss_pred CCCchhhcCCCCCCeeeccCCcCCCCcC
Q 003465 307 GPIPPTLSHLTRLTTLKLFSNQINGSIP 334 (818)
Q Consensus 307 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 334 (818)
.... +..+.+++.|++++|.+....+
T Consensus 269 ~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 269 SISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred cccc--ccccCccCEEeccCccccccch
Confidence 3222 5555555555555555554333
No 72
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.18 E-value=1.9e-11 Score=131.03 Aligned_cols=112 Identities=20% Similarity=0.270 Sum_probs=69.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCC---CCCcc-hHHHHhc----------ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPA---KHPQE-ILSLFSS----------TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE---~~~~~-~l~~~~~----------~~~~~--~~ 755 (818)
|+|||+++++.+||+|||+++........ .....++..|+||| +...+ ..+.|+. ...+. ..
T Consensus 137 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~ 216 (316)
T cd05108 137 ARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 216 (316)
T ss_pred hhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 89999999999999999999987544322 12334567899999 11111 1222221 11111 11
Q ss_pred ---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 ---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
...++....... .+..+...+.+++..|++.+|.+||+|.+|+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 217 ASEISSILEKGERLP---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred HHHHHHHHhCCCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111111111111 12223456778999999999999999999999998873
No 73
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.18 E-value=9.2e-13 Score=139.31 Aligned_cols=175 Identities=34% Similarity=0.512 Sum_probs=132.1
Q ss_pred CCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEc
Q 003465 269 ENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDM 348 (818)
Q Consensus 269 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 348 (818)
.--...+|+.|++. .+|..+..+..|+.+.|.+|.+. .+|..++++..|+.|+|+.|+++ .+|..++.++ |+.|-+
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIV 150 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEE
Confidence 33445667777776 56666667777777777777775 56677777777888888888776 5666666665 788888
Q ss_pred CCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCccccCCCCCCEEecccCcCccc
Q 003465 349 SSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSNNSLTGR 428 (818)
Q Consensus 349 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 428 (818)
++|+++ .+|..++..+.|..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+|..+. .-.|..||++.|++. .
T Consensus 151 sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 151 SNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNKIS-Y 225 (722)
T ss_pred ecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCcee-e
Confidence 888886 56777777888888888888887 45667788888888888888887 5566666 345788888888887 7
Q ss_pred CCccccCCCCCCEEECcCCcCCcc
Q 003465 429 IPSEIRNLSYLHELDLSLNFISGM 452 (818)
Q Consensus 429 ~p~~l~~l~~L~~L~Ls~N~l~~~ 452 (818)
+|-.|.+|+.|++|-|.+|++...
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred cchhhhhhhhheeeeeccCCCCCC
Confidence 888888888888888888888753
No 74
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.17 E-value=1.5e-11 Score=132.85 Aligned_cols=114 Identities=15% Similarity=0.149 Sum_probs=65.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC----CcchHHHHhcc------------cCCCcccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH----PQEILSLFSST------------SDPHITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~----~~~~l~~~~~~------------~~~~~~~~ 757 (818)
++|+|++.+..+|||||||++.-.........-.--..|+|||-- -+..-+.|+.. .++.....
T Consensus 290 ARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~ 369 (474)
T KOG0194|consen 290 ARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY 369 (474)
T ss_pred HHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH
Confidence 789999999999999999998653221111111234689999911 11111223221 11111111
Q ss_pred ceecccCC-CcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 758 YILDQRIS-PPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 758 ~~~d~~l~-~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
++...... +.....+...+..+..+...||..+|++||+|.+|.+.++.+
T Consensus 370 ~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 370 EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence 11111101 111111223444555666699999999999999999999988
No 75
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.17 E-value=8.7e-13 Score=139.49 Aligned_cols=174 Identities=30% Similarity=0.458 Sum_probs=118.2
Q ss_pred CCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEE
Q 003465 100 FPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILD 179 (818)
Q Consensus 100 l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 179 (818)
+..-...||+.|.+. .+|..+..+..|..|.|..|.+. .+|..+.++..|.+|||+.|+++ .+|..+..|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 334455667777766 56666777777777777777776 56777777777777777777776 5666666554 67777
Q ss_pred ccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCC
Q 003465 180 LSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSG 259 (818)
Q Consensus 180 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 259 (818)
+++|+++ .+|..++.+..|..|+.+.|.+. .+|..++++.+|+.|++..|++.. +|..+..+ .|..||++.|++.
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~El~~L-pLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEELCSL-PLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHHHhCC-ceeeeecccCcee-
Confidence 7777776 56666777777777777777776 456667777777777777777653 44445433 4666777777766
Q ss_pred CCCccccCCCCCcEEEccccccC
Q 003465 260 PLPQEIGYLENLVYLSLNVNNLT 282 (818)
Q Consensus 260 ~~~~~l~~l~~L~~L~L~~n~l~ 282 (818)
.+|-.|.++..|++|.|.+|.++
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC
Confidence 55666667777777777777666
No 76
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.17 E-value=2.5e-11 Score=128.03 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=67.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccccccceeCCC----CCCcchHHHHhccc---------CC-Ccc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPA----KHPQEILSLFSSTS---------DP-HIT- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE----~~~~~~l~~~~~~~---------~~-~~~- 755 (818)
|+||++++++.+||+|||+++.+..+... .....++..|+||| ..+....+.|+... .+ ...
T Consensus 136 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~ 215 (284)
T cd05081 136 TRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP 215 (284)
T ss_pred HhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc
Confidence 89999999999999999999977543221 12233456799999 22222222332110 00 000
Q ss_pred --ccceecccCC--------------CcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 --LTYILDQRIS--------------PPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 --~~~~~d~~l~--------------~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..+.++.... ....+.+......+.+++..|++.+|++||||.||+++|+.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 216 AEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 0000011000 0000001122346778999999999999999999999998763
No 77
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.17 E-value=3.9e-11 Score=125.32 Aligned_cols=111 Identities=19% Similarity=0.275 Sum_probs=68.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccccccceeCCC----CCCcchHHHHhc----------ccCCC--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDPH--I 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~~--~ 754 (818)
|+||++++++.+|++|||+++........ ......++.|+||| +..+...+.|+. ...+. .
T Consensus 135 p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~ 214 (268)
T cd05063 135 ARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDM 214 (268)
T ss_pred hhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 89999999999999999999876433211 12233456899999 222222223321 11111 0
Q ss_pred c---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 755 T---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 755 ~---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
. ....+...... +...+....+.+++.+|++.+|++||+|.+|++.|+++
T Consensus 215 ~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 215 SNHEVMKAINDGFRL---PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 00111111111 11233456678899999999999999999999999865
No 78
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.16 E-value=5.1e-11 Score=124.30 Aligned_cols=114 Identities=14% Similarity=0.192 Sum_probs=68.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------ccCCC--cc--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDPH--IT--L 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~~--~~--~ 756 (818)
|+||++|.++.+|++|||+++.............|+.+|+|||. ..+...+.|+. ...+. .. .
T Consensus 134 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 213 (267)
T cd08229 134 PANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 213 (267)
T ss_pred HHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH
Confidence 89999999999999999999876544333345578999999992 11111222321 11110 00 0
Q ss_pred cceecccCCCcCccc-hHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 757 TYILDQRISPPKKQK-IVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~-~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.+...........+. .......+.+++.+|++.+|++||+|.+|++.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 214 YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 011110000000000 112334566777899999999999999999998875
No 79
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.16 E-value=7.8e-11 Score=122.60 Aligned_cols=113 Identities=18% Similarity=0.184 Sum_probs=69.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCCC---C-CcchHHHHhcc----------cCC--Cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPAK---H-PQEILSLFSST----------SDP--HITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE~---~-~~~~l~~~~~~----------~~~--~~~~ 756 (818)
|+||++++++++|++|||+++.+...... .....|+..|+|||. . .+...+.|+.. ..+ ....
T Consensus 130 p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~ 209 (262)
T cd05071 130 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 209 (262)
T ss_pred cccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh
Confidence 89999999999999999999877543322 223457788999992 1 12122333311 111 1111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.++.+............+....+.+++..|++.+|++||++.++.+.|+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 210 REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred HHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 11111111111001123445667889999999999999999999999875
No 80
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.16 E-value=3.9e-11 Score=125.12 Aligned_cols=115 Identities=15% Similarity=0.188 Sum_probs=70.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------ccCC--Cc--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDP--HI--TL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~--~~--~~ 756 (818)
|+||++++++.+|++|||+++.+...........|+..|+|||. ......+.|.. ...+ .. ..
T Consensus 134 p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 213 (267)
T cd08224 134 PANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 213 (267)
T ss_pred hhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccH
Confidence 89999999999999999999876544333345678999999992 11111222321 1111 10 01
Q ss_pred cceecccCCCcCccchH-HHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 757 TYILDQRISPPKKQKIV-QDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~-~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
.++.+....+...+.+. .....+.+++..|++.+|++||++.+|+++|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 214 YSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11111111111101112 33446677888999999999999999999998764
No 81
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.16 E-value=3.2e-11 Score=127.39 Aligned_cols=115 Identities=14% Similarity=0.175 Sum_probs=70.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHhc----------ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~~--~~ 755 (818)
|+||++++++++|++|||+++....... ......|+.+|+||| ..+....+.|+. ...+. ..
T Consensus 148 p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~ 227 (288)
T cd05093 148 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 227 (288)
T ss_pred cceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999986643321 123345678999999 222222222321 11111 11
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..++++....+.....+......+.+++..|++.+|.+||+|.+|.+.|+.+.
T Consensus 228 ~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 228 NNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 11111111111110111123345788999999999999999999999999874
No 82
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.16 E-value=5.8e-11 Score=124.89 Aligned_cols=113 Identities=13% Similarity=0.197 Sum_probs=68.1
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCC----CCCcchHHHHhc----------ccCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~--~~~ 755 (818)
|+||+++.++.+|++|||+++...... .......+++.|+||| ...+...+.|+. ...+ ...
T Consensus 150 p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~ 229 (280)
T cd05049 150 TRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS 229 (280)
T ss_pred cceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 899999999999999999998653322 1223445678999999 222112223321 1111 111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
..+.++....+.....+......+.+++..|++.+|++||++.||+++|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 230 NEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111111111111101122234567788889999999999999999999863
No 83
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.16 E-value=4.3e-11 Score=125.80 Aligned_cols=112 Identities=20% Similarity=0.260 Sum_probs=69.9
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC---CCcc-hHHHHhc----------ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK---HPQE-ILSLFSS----------TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~---~~~~-~l~~~~~----------~~~~~--~~ 755 (818)
|+|||+|+++.+|++|||+++.+..+.. ..+...|+.+|+|||. .+.+ ..+.|+. ...+. ..
T Consensus 137 p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~ 216 (279)
T cd05111 137 ARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR 216 (279)
T ss_pred cceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 8999999999999999999997643322 2345668889999992 1111 1222321 11111 11
Q ss_pred ---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 ---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..+++....... .+..+...+.+++..|++.+|++||+|.|+++.|..+.
T Consensus 217 ~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~ 269 (279)
T cd05111 217 PHEVPDLLEKGERLA---QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA 269 (279)
T ss_pred HHHHHHHHHCCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 111111111111 11123345677888999999999999999999998874
No 84
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.15 E-value=4.8e-11 Score=123.66 Aligned_cols=111 Identities=15% Similarity=0.181 Sum_probs=66.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC----CcchHHHHhc----------ccCC--Ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH----PQEILSLFSS----------TSDP--HITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~----~~~~l~~~~~----------~~~~--~~~~~ 757 (818)
|+||++|+++.+|++|||+++...... ....++.+|+|||.. .....+.|.. ...+ .....
T Consensus 130 p~Nili~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 206 (256)
T cd05039 130 ARNVLVSEDLVAKVSDFGLAKEASQGQ---DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred cceEEEeCCCCEEEccccccccccccc---ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 899999999999999999998763321 133456789999921 1111222221 1111 11111
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
++............+......+.+++.+|++.+|++||++.+|+++|+.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 207 DVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11110000000011222345677888899999999999999999999764
No 85
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.15 E-value=7.2e-11 Score=121.86 Aligned_cols=112 Identities=16% Similarity=0.132 Sum_probs=66.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC----CCCcchHHHHhc----------ccCC--Cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDP--HITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~--~~~~ 756 (818)
|+||++++++.+|++|||+++........ .....++++|+||| ..++...+.|+. ...+ ....
T Consensus 121 p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~ 200 (250)
T cd05085 121 ARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN 200 (250)
T ss_pred hheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH
Confidence 89999999999999999999865433211 12234567899999 222222223321 1111 1110
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.+.............+......+.+++..|++.+|++||+|.||+++|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 201 QQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0110000000000112223456788999999999999999999999985
No 86
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.15 E-value=3.6e-11 Score=127.29 Aligned_cols=115 Identities=14% Similarity=0.180 Sum_probs=70.6
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCC----CCCcchHHHHhc----------ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~~--~~ 755 (818)
|+||++|+++.+||+|||+++...... .......|+..|+||| ..+....+.|+. ...+. ..
T Consensus 151 p~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 230 (291)
T cd05094 151 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230 (291)
T ss_pred cceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 899999999999999999998664322 1223456788999999 222222222321 11111 11
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..++++....+.....+..+...+.+++.+|++.+|++||+|.+|+++|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 231 NTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred HHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 11111111111110112223456778899999999999999999999999884
No 87
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.15 E-value=7.3e-11 Score=122.64 Aligned_cols=113 Identities=18% Similarity=0.193 Sum_probs=68.3
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC----CCCcchHHHHhc----------ccCC--Cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDP--HITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~--~~~~ 756 (818)
|+||++++++.+|++|||+++.+..... ......++.+|+||| ..++...+.|+. ...+ ....
T Consensus 130 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 209 (260)
T cd05070 130 SANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 209 (260)
T ss_pred cceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 8999999999999999999987644322 122334667899999 222222222321 1111 1111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.++.+........+.+......+.+++.+|++.+|++||+|.++.+.|+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 210 REVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11111111110101122334567788899999999999999999999875
No 88
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.15 E-value=2.2e-11 Score=143.40 Aligned_cols=108 Identities=30% Similarity=0.395 Sum_probs=72.7
Q ss_pred CCCCcEEEcCCCC--CcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCE
Q 003465 100 FPNLESFRIWYSN--ISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSI 177 (818)
Q Consensus 100 l~~L~~L~L~~n~--~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 177 (818)
.++|++|-+..|. +.......|..++.|++|||++|.--+.+|+.++.|-+||+|+++++.+. .+|..+.+|++|.+
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 4467777777665 33333345667777777777776555567777777777777777777776 67777777777777
Q ss_pred EEccCCCCCCCCccCCCCCCCCcEEEcccCc
Q 003465 178 LDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQ 208 (818)
Q Consensus 178 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 208 (818)
|++..+.....+|.....+++|++|.+....
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccc
Confidence 7777766554555555567777777766543
No 89
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.14 E-value=6.5e-11 Score=123.55 Aligned_cols=111 Identities=22% Similarity=0.333 Sum_probs=65.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC---C----cchHHHHhcc---------cCCC--c-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH---P----QEILSLFSST---------SDPH--I- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~---~----~~~l~~~~~~---------~~~~--~- 754 (818)
|+||++++++.+||+|||+++.+...........|+.+|+|||.. . ....+.|+.. ..+. .
T Consensus 134 p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~ 213 (267)
T cd06646 134 GANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred HHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 899999999999999999998764332223445789999999921 1 1122333211 1110 0
Q ss_pred ---cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 755 ---TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 755 ---~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
....+...................+.+++.+|++.+|++||++.++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 214 PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred hhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 01111111111111001111234566788899999999999999998753
No 90
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.14 E-value=4.7e-11 Score=129.09 Aligned_cols=108 Identities=14% Similarity=0.175 Sum_probs=71.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccccccceeCCC----CCCcc-------hHHHHh-----cccCCCc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPA----KHPQE-------ILSLFS-----STSDPHI 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE----~~~~~-------~l~~~~-----~~~~~~~ 754 (818)
+.|+||-..-.+||+||||.|.+...... +....--+.|.||| ++... .+..|. ...+...
T Consensus 240 ARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~ 319 (1039)
T KOG0199|consen 240 ARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC 319 (1039)
T ss_pred hhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC
Confidence 68999999999999999999998654322 12223347899999 22222 222332 1122221
Q ss_pred c---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 755 T---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 755 ~---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
+ +.+.+|.+-. .+.+..|.+.+..|+..||...|++||++.++++.+
T Consensus 320 ~g~qIL~~iD~~er---LpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 320 RGIQILKNIDAGER---LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CHHHHHHhcccccc---CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 1 2333453322 234667889999999999999999999999998544
No 91
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.14 E-value=1e-10 Score=122.06 Aligned_cols=115 Identities=15% Similarity=0.185 Sum_probs=70.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhcc---------cCC--Ccc--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSST---------SDP--HIT--L 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~~---------~~~--~~~--~ 756 (818)
|+||+++.++.+|++|||+++.............|+..|+|||. ......+.|... ..+ ... .
T Consensus 134 ~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~ 213 (267)
T cd08228 134 PANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 213 (267)
T ss_pred HHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH
Confidence 89999999999999999999877543333334578899999992 111122233211 111 000 0
Q ss_pred cceecccCCCcCccc-hHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 757 TYILDQRISPPKKQK-IVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~-~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
.++.+........+. .......+.+++..||+.+|++||++.+|++.+++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 214 FSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 111111000001011 1223355778888999999999999999999998875
No 92
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.14 E-value=5.1e-11 Score=123.58 Aligned_cols=111 Identities=15% Similarity=0.159 Sum_probs=67.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccccccceeCCCC---CCcc-hHHHHhc----------ccCCC--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPAK---HPQE-ILSLFSS----------TSDPH--I 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE~---~~~~-~l~~~~~----------~~~~~--~ 754 (818)
|+||++++++.+||+|||+++.+...... .+...++..|+|||. .+.+ ..+.|+. ...+. .
T Consensus 123 p~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 202 (257)
T cd05116 123 ARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM 202 (257)
T ss_pred hhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 89999999999999999999877543221 223345688999991 1111 1222221 11111 1
Q ss_pred c---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 755 T---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 755 ~---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
. ..+.++....... +......+.+++..|++.+|++||+|.+|+++|++.
T Consensus 203 ~~~~~~~~i~~~~~~~~---~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 203 KGNEVTQMIESGERMEC---PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CHHHHHHHHHCCCCCCC---CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1 1111222111111 222344566788899999999999999999999853
No 93
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.14 E-value=6.5e-11 Score=123.93 Aligned_cols=114 Identities=13% Similarity=0.199 Sum_probs=69.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCCC---C-CcchHHHHhc----------cc--CCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPAK---H-PQEILSLFSS----------TS--DPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE~---~-~~~~l~~~~~----------~~--~~~~~ 755 (818)
|+||++++++.+||+|||+++........ .....++..|+|||. . +....+.|+. .. +....
T Consensus 141 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~ 220 (273)
T cd05035 141 ARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE 220 (273)
T ss_pred hheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 89999999999999999999976443221 222345678999992 1 1111122221 11 11111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
-.++.+....+.....+......+.+++.+|++.+|++||+|.||++.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 221 NHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1112211111111111233456778888999999999999999999999864
No 94
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.14 E-value=1.1e-11 Score=119.30 Aligned_cols=105 Identities=21% Similarity=0.254 Sum_probs=65.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC-C----cc-hHHHHhc---------ccCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH-P----QE-ILSLFSS---------TSDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~-~----~~-~l~~~~~---------~~~~~~~~~~ 758 (818)
|||||||..+.+|++|||++..+.. +-..|.-+|...||||||- | +| -...|+- ..++......
T Consensus 196 PSNILldr~G~vKLCDFGIcGqLv~-SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s 274 (361)
T KOG1006|consen 196 PSNILLDRHGDVKLCDFGICGQLVD-SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS 274 (361)
T ss_pred hhheEEecCCCEeeecccchHhHHH-HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH
Confidence 9999999999999999999987643 3345667899999999932 1 22 2344542 2222222222
Q ss_pred eec---------c-cCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHH
Q 003465 759 ILD---------Q-RISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVS 801 (818)
Q Consensus 759 ~~d---------~-~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~ 801 (818)
++| | .+..+. ...+--..+...+-.|+-.+..+||...++.
T Consensus 275 vfeql~~Vv~gdpp~l~~~~--~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk 325 (361)
T KOG1006|consen 275 VFEQLCQVVIGDPPILLFDK--ECVHYSFSMVRFINTCLIKDRSDRPKYDDLK 325 (361)
T ss_pred HHHHHHHHHcCCCCeecCcc--cccccCHHHHHHHHHHhhcccccCcchhhhh
Confidence 222 1 111111 1111223455566699999999999988754
No 95
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.14 E-value=4e-11 Score=129.90 Aligned_cols=115 Identities=20% Similarity=0.278 Sum_probs=68.8
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC---CCC-cchHHHHhc----------ccCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA---KHP-QEILSLFSS----------TSDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE---~~~-~~~l~~~~~----------~~~~--~~~ 755 (818)
|+|||+|+++.+||+|||+++....+.. ......++..|+||| ... +...+.|+. ...+ ...
T Consensus 202 p~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~ 281 (338)
T cd05102 202 ARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ 281 (338)
T ss_pred cceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999987643322 123345778999999 121 111122221 1111 111
Q ss_pred ccceecccC-CCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LTYILDQRI-SPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~~~~d~~l-~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..+.+...+ .+.....+......+.+++..|++.+|++||+|.||++.|+++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 282 INEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred ccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111000011 00000011223345778999999999999999999999999764
No 96
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.14 E-value=6.2e-11 Score=122.36 Aligned_cols=109 Identities=20% Similarity=0.307 Sum_probs=65.1
Q ss_pred ccccccCC-CCcccccccccceeccCC---CCCccccccccceeCCC--C-CCcc--hHHHHhcccC-----------CC
Q 003465 694 FNNILLNS-EFEAFFGNFGVARLLNSD---SSNRTLIAGTYRYIAPA--K-HPQE--ILSLFSSTSD-----------PH 753 (818)
Q Consensus 694 ~~NILLd~-~~~~ki~DFGla~~~~~~---~~~~~~~~gt~gy~aPE--~-~~~~--~l~~~~~~~~-----------~~ 753 (818)
++|||+|. ++.+||||||+|+..... ........||+.||||| + ..+. ..+.|+.... .+
T Consensus 145 ~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 145 PANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred cceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 89999999 799999999999987631 12234688999999999 2 1111 4455653221 00
Q ss_pred --cccc---ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 754 --ITLT---YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 754 --~~~~---~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.... .+......+...+.-.++... ....|.+.+|++|||+.+.++.--
T Consensus 225 ~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~---Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 225 FFEEAEALLLIGREDSLPEIPDSLSDEAKD---FLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred hcchHHHHHHHhccCCCCCCCcccCHHHHH---HHHHHhhcCcccCcCHHHHhhChh
Confidence 0000 000011111110111233444 445999999999999999886543
No 97
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.13 E-value=7.5e-11 Score=122.55 Aligned_cols=110 Identities=19% Similarity=0.230 Sum_probs=67.1
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCCC----CCcchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~~~ 756 (818)
|+||++++++.++++|||+++....... ......++..|+|||. .++...+.|+. ...+. ...
T Consensus 130 p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 130 AANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred HHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 8999999999999999999987753322 2234456789999991 11111122221 11111 111
Q ss_pred cce---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 757 TYI---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 757 ~~~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.++ ++...... .+......+.+++.+|++.+|++||++.++...|+.
T Consensus 210 ~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 210 PEVIQNLERGYRMP---RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHHHcCCCCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111 11111111 112223457788889999999999999999999874
No 98
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.13 E-value=4.9e-11 Score=124.39 Aligned_cols=114 Identities=14% Similarity=0.141 Sum_probs=67.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC---CCC-cchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA---KHP-QEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE---~~~-~~~l~~~~~----------~~~~~--~~~ 756 (818)
|+|||++.++++|++|||.++....... ......++..|+||| ..+ ....+.|+. ...+. ...
T Consensus 135 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~ 214 (266)
T cd05064 135 AHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG 214 (266)
T ss_pred HhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 8999999999999999998775432211 122344678899999 111 112222321 11111 111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.+++...-.....+.+..+...+.+++..||+.+|++||+|.++.+.|.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 215 QDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 111111001101011334556678899999999999999999999998754
No 99
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.13 E-value=5e-11 Score=125.20 Aligned_cols=113 Identities=14% Similarity=0.145 Sum_probs=67.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCCC----CCcchHHHHhcc------------cCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPAK----HPQEILSLFSST------------SDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE~----~~~~~l~~~~~~------------~~~~~~ 755 (818)
|+||++++++++|++|||+++........ .....++.+|+|||. ..+...+.|+.. .+....
T Consensus 147 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~ 226 (277)
T cd05062 147 ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS 226 (277)
T ss_pred hheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 89999999999999999999866433211 123456789999992 222222233211 111111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
..++.+..........+......+.+++.+|++.+|++||++.|+++.|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 227 NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 111111111110001122234467788899999999999999999999864
No 100
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.11 E-value=8.7e-11 Score=123.50 Aligned_cols=114 Identities=17% Similarity=0.218 Sum_probs=70.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCCCC----CcchHHHHhc----------ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPAKH----PQEILSLFSS----------TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE~~----~~~~l~~~~~----------~~~~~--~~ 755 (818)
|+|||++++..+|++|||+++.+...... .....++..|+|||.. .+...+.|+. ...+. ..
T Consensus 137 p~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 216 (279)
T cd05109 137 ARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP 216 (279)
T ss_pred cceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 89999999999999999999987543221 2233456789999921 1112222321 11111 00
Q ss_pred ---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCCCc
Q 003465 756 ---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFPYL 810 (818)
Q Consensus 756 ---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~~~ 810 (818)
....+...... +.+......+.+++..|++.+|++||++.++++.|+.+.+.
T Consensus 217 ~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 217 AREIPDLLEKGERL---PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHHHHHHCCCcC---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 01111111111 11223345677888899999999999999999999888443
No 101
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.11 E-value=6.1e-11 Score=123.84 Aligned_cols=160 Identities=18% Similarity=0.177 Sum_probs=97.0
Q ss_pred HHHHHhhhhhhcccc----CcEEEEEc-CCCcEEEEEeccccccchhhhhHhhh--------------------------
Q 003465 643 IIRATEDLISDIALE----LDVTAAFT-KHGCLVAEYGSEQGRSAFFKSFQNEA-------------------------- 691 (818)
Q Consensus 643 l~~at~~f~~~~~ig----g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~f~~E~-------------------------- 691 (818)
+..++.++.....+| |.||+|.. .++..||+|..........+.|.+|+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 345667777777777 89999985 46788999976554444445566665
Q ss_pred ------------------------------------------------cc---ccccccCC-CCcccccccccceeccCC
Q 003465 692 ------------------------------------------------HV---FNNILLNS-EFEAFFGNFGVARLLNSD 719 (818)
Q Consensus 692 ------------------------------------------------h~---~~NILLd~-~~~~ki~DFGla~~~~~~ 719 (818)
|+ |+||++|. +..+||+|||+++.....
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 22 78999987 679999999999876433
Q ss_pred CCCccccccccceeCCCC---C---CcchHHHHhcc---------cCCCcccc----ceecccCCCcCccchHHHHHHHH
Q 003465 720 SSNRTLIAGTYRYIAPAK---H---PQEILSLFSST---------SDPHITLT----YILDQRISPPKKQKIVQDIALAS 780 (818)
Q Consensus 720 ~~~~~~~~gt~gy~aPE~---~---~~~~l~~~~~~---------~~~~~~~~----~~~d~~l~~~~~~~~~~~~~~~~ 780 (818)
........|+.+|+|||. . .....+.|+.. ..+..... ..............+......+.
T Consensus 163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (268)
T cd06624 163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAK 242 (268)
T ss_pred CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHH
Confidence 333334568999999991 1 11122333211 11110000 00000000000011222334566
Q ss_pred HHHHhccCCCCCCCCChHHHHH
Q 003465 781 IVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 781 ~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.++.+|++.+|++||+|.||++
T Consensus 243 ~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 243 NFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred HHHHHHcCCCchhCCCHHHHHh
Confidence 7788999999999999999876
No 102
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.11 E-value=1.1e-10 Score=121.45 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=68.5
Q ss_pred ccccccCCCCcccccccccceeccCCC----CCccccccccceeCCCC---CC-cchHHHHhc----------ccCC--C
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS----SNRTLIAGTYRYIAPAK---HP-QEILSLFSS----------TSDP--H 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~----~~~~~~~gt~gy~aPE~---~~-~~~l~~~~~----------~~~~--~ 753 (818)
|+|||+++++.+|++|||+++.+.... .......++..|+|||. .+ ....+.|.. ...+ .
T Consensus 126 ~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~ 205 (262)
T cd05058 126 ARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 205 (262)
T ss_pred cceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 899999999999999999998664321 11234567788999992 11 112223321 1111 1
Q ss_pred ccccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 754 ITLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 754 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
....+.......+.....+......+.+++..|++.+|++||++.+|+++|+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 206 VDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred CCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 111111111111111011112234677899999999999999999999999875
No 103
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.11 E-value=6.9e-11 Score=133.80 Aligned_cols=109 Identities=18% Similarity=0.162 Sum_probs=66.4
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC---CCC-cchHHHHhcc-----------cCCCccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA---KHP-QEILSLFSST-----------SDPHITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE---~~~-~~~l~~~~~~-----------~~~~~~~ 756 (818)
|+|||+|+++.+||+|||+++.+..... .....+||++|+||| ... +...+.|+.. .+.....
T Consensus 197 p~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~ 276 (478)
T PTZ00267 197 SANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ 276 (478)
T ss_pred HHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8999999999999999999997754322 234567999999999 221 1123334311 1111111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+++...+.+...+.+......+.+++..|++.+|++||++.+++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 277 REIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1222222211110111122345667888999999999999999864
No 104
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.11 E-value=9.8e-11 Score=121.27 Aligned_cols=110 Identities=18% Similarity=0.253 Sum_probs=67.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCC-cchHHHHh---------cccCCC--ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHP-QEILSLFS---------STSDPH--ITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~-~~~l~~~~---------~~~~~~--~~~~~ 758 (818)
++||++++++++|++|||+++.+...........|+..|+||| ..+ ....+.|. ....+. ....+
T Consensus 129 ~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 208 (256)
T cd08529 129 SLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA 208 (256)
T ss_pred cceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 8999999999999999999997755443344567899999999 111 11112222 111111 11111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.............+......+.+++.+|++.+|++||+|.++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 209 LILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 111111111101122334567788889999999999999999863
No 105
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.10 E-value=1.9e-10 Score=119.52 Aligned_cols=113 Identities=17% Similarity=0.173 Sum_probs=67.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC----CCCcchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~~--~~~ 756 (818)
++||++|+++.+|++|||+++....... ......++.+|+||| ..++...+.|+. ...+. ...
T Consensus 130 ~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 209 (260)
T cd05069 130 AANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN 209 (260)
T ss_pred cceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 8999999999999999999987643321 122345678999999 222222222321 11111 000
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.+..+........+.+......+.+++.+|++.+|++||+|.+|.+.|+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 210 REVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01111111110001122334556778889999999999999999999975
No 106
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.10 E-value=3.5e-11 Score=133.22 Aligned_cols=105 Identities=20% Similarity=0.226 Sum_probs=62.8
Q ss_pred ccccccCC-----CCcccccccccceeccCCCCC---ccccccccceeCCC-------CCCcchHHHH------h--ccc
Q 003465 694 FNNILLNS-----EFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPA-------KHPQEILSLF------S--STS 750 (818)
Q Consensus 694 ~~NILLd~-----~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE-------~~~~~~l~~~------~--~~~ 750 (818)
|+|||++. ..+|+|||||++|.+..+.+. ..++.||-||+||| .+++| +-.. + ...
T Consensus 634 PQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avD-iFslGCvfyYvltgG~ 712 (903)
T KOG1027|consen 634 PQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVD-IFSLGCVFYYVLTGGS 712 (903)
T ss_pred CceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccc-hhhcCceEEEEecCCc
Confidence 99999976 368999999999998766443 45788999999999 23333 1111 0 001
Q ss_pred CCCcc----ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHH
Q 003465 751 DPHIT----LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVS 801 (818)
Q Consensus 751 ~~~~~----~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~ 801 (818)
-+.+. -..|+...-.-.......++ ...+++-..++.+|..||++.+|+
T Consensus 713 HpFGd~~~R~~NIl~~~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 713 HPFGDSLERQANILTGNYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred cCCCchHHhhhhhhcCccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 11111 01111111100000001112 555677799999999999999987
No 107
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.10 E-value=1.1e-10 Score=120.86 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=66.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc----------ccCC--Ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDP--HITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~--~~~~~ 757 (818)
|+||++++++.+|++|||+++...... ....++.+|+||| ..++...+.|.. ...+ .....
T Consensus 130 p~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~ 206 (256)
T cd05082 130 ARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 206 (256)
T ss_pred hheEEEcCCCcEEecCCccceeccccC---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 899999999999999999998653322 2344567899999 112111222321 1111 11111
Q ss_pred ceecccCC-CcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 758 YILDQRIS-PPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 758 ~~~d~~l~-~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
++. +.+. ......+..+...+.+++.+|++.+|++||+|.++++.|+++
T Consensus 207 ~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 207 DVV-PRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHH-HHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 111 1110 000011223345677888899999999999999999999864
No 108
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.09 E-value=1.4e-10 Score=120.21 Aligned_cols=112 Identities=13% Similarity=0.178 Sum_probs=65.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCCC----CCcchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~~~ 756 (818)
|+||++++++.+|++|||+++........ .....++.+|+|||. ..+...+.|+. ...+. ...
T Consensus 128 p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 207 (256)
T cd05059 128 ARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN 207 (256)
T ss_pred HhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH
Confidence 89999999999999999999876433211 122334568999991 11111222321 11111 000
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.+.............+......+.+++.+|++.+|++||+|.||++.|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 208 SEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 1111110000000111223456788999999999999999999999873
No 109
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.09 E-value=1.5e-10 Score=121.24 Aligned_cols=114 Identities=15% Similarity=0.186 Sum_probs=68.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCCCC----CcchHHHHhcc----------cCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPAKH----PQEILSLFSST----------SDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE~~----~~~~l~~~~~~----------~~~--~~~ 755 (818)
|+|||+++++.+||+|||+++........ .....+++.|+|||.. .+...+.|+.. ..+ ...
T Consensus 140 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 219 (272)
T cd05075 140 ARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE 219 (272)
T ss_pred hhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 89999999999999999999976443221 1233467789999921 11122223211 111 111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..++.+....+.....+......+.+++..|++.+|++||+|.++++.|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 220 NSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111111111110011222345577888999999999999999999999864
No 110
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.09 E-value=1e-10 Score=123.88 Aligned_cols=114 Identities=15% Similarity=0.185 Sum_probs=68.9
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhcc------------cCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSST------------SDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~~------------~~~~~~ 755 (818)
|+||++++++.+|++|||+++.+..... ......++.+|+|||. ..+...+.|+.. .+....
T Consensus 160 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 239 (293)
T cd05053 160 ARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 239 (293)
T ss_pred eeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999997654321 1233446788999992 111112222211 111111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..++.+....+...+.+..+...+.+++..|++.+|++||+|.||++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 240 VEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 1111111111100011223345677899999999999999999999999875
No 111
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.09 E-value=5.5e-11 Score=125.42 Aligned_cols=108 Identities=19% Similarity=0.163 Sum_probs=63.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHh---------cccCCCc--c---
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFS---------STSDPHI--T--- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~---------~~~~~~~--~--- 755 (818)
|+|||+|+++.+||+|||+++...... ......||.+|+||| +..+...+.|+ ....+.. .
T Consensus 130 p~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~ 208 (285)
T cd05631 130 PENILLDDRGHIRISDLGLAVQIPEGE-TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV 208 (285)
T ss_pred HHHEEECCCCCEEEeeCCCcEEcCCCC-eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch
Confidence 899999999999999999998764332 223457999999999 11111122232 1111111 0
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCC-----hHHHHH
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPT-----MQRVSQ 802 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~-----m~~V~~ 802 (818)
..+.++..+.......+.+....+.+++..|++.+|++||+ +.++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 209 KREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred hHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 01112222211110111122234567788999999999997 777775
No 112
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.09 E-value=1.9e-10 Score=119.18 Aligned_cols=112 Identities=13% Similarity=0.149 Sum_probs=65.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC----CCCcchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~~--~~~ 756 (818)
|+||+++.+..+||+|||+++........ .....++.+|+||| ..+....+.|.. ...+. ...
T Consensus 128 p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 207 (256)
T cd05112 128 ARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN 207 (256)
T ss_pred cceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 89999999999999999999866432211 12334567999999 222222222321 11111 111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.++++....+.....+......+.+++.+|++.+|++||+|.+|+++|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 208 SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1111111100000001112356778999999999999999999999874
No 113
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.08 E-value=2.2e-10 Score=120.21 Aligned_cols=107 Identities=21% Similarity=0.274 Sum_probs=65.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCCCcc--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPHIT--LTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~~~--~~~ 758 (818)
|+||++++++.+|++|||+++.+...........|+.+|+||| ..+....+.|+. ...+... ...
T Consensus 129 p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 208 (277)
T cd06642 129 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR 208 (277)
T ss_pred hheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh
Confidence 8999999999999999999987654333333456899999999 111112223321 1111100 000
Q ss_pred ---eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ---ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ---~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.+........ .......+.+++..|++.+|++||+|.+|++.
T Consensus 209 ~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 209 VLFLIPKNSPPTL---EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHhhhhcCCCCCC---CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0111111111 12234557788889999999999999999973
No 114
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.08 E-value=1.2e-10 Score=120.83 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=66.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCCC----CCcchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~~~ 756 (818)
|+||++++++.+||+|||+++........ .....++..|+|||. ......+.|+. ...+. ...
T Consensus 128 p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 207 (256)
T cd05113 128 ARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN 207 (256)
T ss_pred cceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 89999999999999999999876443221 223346788999992 11112222321 11111 111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.++.+..........+......+.+++.+|++.+|++||++.++++.|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 208 SETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1111111111110011122356678888999999999999999998874
No 115
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.08 E-value=1.4e-10 Score=122.28 Aligned_cols=115 Identities=14% Similarity=0.158 Sum_probs=68.1
Q ss_pred ccccccCCCCcccccccccceeccCCCC---CccccccccceeCCCC---C----Ccc------hHHHHhcccCCCc---
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPAK---H----PQE------ILSLFSSTSDPHI--- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE~---~----~~~------~l~~~~~~~~~~~--- 754 (818)
|+||++++++.+|++|||+++....... ......++..|+|||. . ..| .+.++.....+..
T Consensus 135 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 214 (283)
T cd05080 135 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP 214 (283)
T ss_pred hheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCc
Confidence 8999999999999999999987654322 1123346678999991 1 111 1111111111110
Q ss_pred -cccceecccCCC-------------cCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 755 -TLTYILDQRISP-------------PKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 755 -~~~~~~d~~l~~-------------~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
...+..+..... ...+.+......+.+++..|++.+|++||+|++|+++|+++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 215 KKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred chhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 011111111100 000011223456788999999999999999999999998763
No 116
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.07 E-value=2e-10 Score=120.94 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=67.2
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCCC----CCcchHHHHhc----------ccCCC--c-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--I- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~- 754 (818)
|+|||+|+++.+|++|||+++...... .......++.+|+|||. ..+...+.|+. ...+. .
T Consensus 152 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05090 152 ARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS 231 (283)
T ss_pred cceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 899999999999999999998764322 12234456788999992 11112223321 11111 0
Q ss_pred --cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 755 --TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 755 --~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
...+.++...... .+......+.+++..|++.+|++||++.+|.++|..
T Consensus 232 ~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 232 NQEVIEMVRKRQLLP---CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 0111111111111 122234456778889999999999999999999864
No 117
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.07 E-value=1.3e-10 Score=122.81 Aligned_cols=114 Identities=15% Similarity=0.134 Sum_probs=68.6
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhcc------------cCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSST------------SDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~~------------~~~~~~ 755 (818)
|+||++++++++|++|||+++....... ......++..|+|||. ..+...+.|+.. .+....
T Consensus 147 p~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~ 226 (288)
T cd05061 147 ARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 226 (288)
T ss_pred hheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999986643221 1223346788999992 111122233211 111111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..++.+....+.....+..+...+.+++..|++.+|++||+|.++++.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 227 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1112111111111011222345677888899999999999999999999864
No 118
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.07 E-value=5e-11 Score=127.46 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=62.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHh---------cccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFS---------STSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~---------~~~~~--~~~~~~ 758 (818)
|+|||+|.++.+||+|||+++............+||++|+||| ..+.+ ..+.|+ ....+ .....+
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~ 200 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE 200 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH
Confidence 8999999999999999999986544333445678999999999 11111 112222 11111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
+....+.... ..+......+.++...|++.+|++||++..+.+.
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~ 244 (312)
T cd05585 201 MYRKILQEPL-RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEI 244 (312)
T ss_pred HHHHHHcCCC-CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHH
Confidence 1111111111 0111122345567779999999999865444333
No 119
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.07 E-value=5.8e-11 Score=121.59 Aligned_cols=42 Identities=33% Similarity=0.484 Sum_probs=35.5
Q ss_pred ccccccCCC------CcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSE------FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~------~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||||+.. -..||||||+||.+... ....+.+||+-|||||
T Consensus 137 PQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~-~~a~tlcGSplYMAPE 184 (429)
T KOG0595|consen 137 PQNILLSTTARNDTSPVLKIADFGFARFLQPG-SMAETLCGSPLYMAPE 184 (429)
T ss_pred cceEEeccCCCCCCCceEEecccchhhhCCch-hHHHHhhCCccccCHH
Confidence 999999875 46799999999998643 3445789999999999
No 120
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.07 E-value=1.7e-10 Score=120.50 Aligned_cols=114 Identities=18% Similarity=0.248 Sum_probs=67.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccccccceeCCC----CCCcchHHHHhc----------ccCC--Cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDP--HI 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~--~~ 754 (818)
|+|||+++++.+|++|||+++........ .....++..|+||| +.++...+.|+. ...+ ..
T Consensus 134 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~ 213 (267)
T cd05066 134 ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEM 213 (267)
T ss_pred hhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccC
Confidence 89999999999999999999977543221 12233467899999 222222222321 1111 11
Q ss_pred cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 755 TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 755 ~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
...+..+........+........+.+++..|++.+|.+||+|.+|++.|+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 214 SNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 01111111111100011222345667888899999999999999999999864
No 121
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.07 E-value=1.8e-10 Score=121.79 Aligned_cols=42 Identities=31% Similarity=0.378 Sum_probs=35.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+|++|||+++..... .......||..|+|||
T Consensus 138 p~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE 179 (290)
T cd07862 138 PQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPE 179 (290)
T ss_pred HHHEEEcCCCCEEEccccceEeccCC-cccccccccccccChH
Confidence 89999999999999999999876443 2334567999999999
No 122
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.07 E-value=1.5e-10 Score=121.81 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=68.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHhc----------ccCCCc--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDPHI--T 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~~~--~ 755 (818)
|+||++++++.+||+|||+++.+..+.. ......++..|+||| ..++...+.|+. ...+.. .
T Consensus 145 p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 224 (280)
T cd05043 145 ARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID 224 (280)
T ss_pred HhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC
Confidence 8999999999999999999987643321 122345678899999 222222233321 111110 0
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..++...............+...+.+++.+|++.+|++||++.+|++.|+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 225 PFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0111100000000011222345677889999999999999999999999876
No 123
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.06 E-value=1.5e-10 Score=119.97 Aligned_cols=111 Identities=17% Similarity=0.226 Sum_probs=67.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccccccceeCCC----CCCcchHHHHhc----------ccCCC--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDPH--I 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~~--~ 754 (818)
|+|||++.+..+|++|||+++....+... .+...+++.|+||| .......+.|+. ...+. .
T Consensus 123 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 202 (257)
T cd05115 123 ARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM 202 (257)
T ss_pred hheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC
Confidence 89999999999999999999876443221 22333467899999 111111222321 11111 1
Q ss_pred cccce---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 755 TLTYI---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 755 ~~~~~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
...++ +...... +.+..+...+.+++..||+.+|++||+|.+|.+.|+.+
T Consensus 203 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 203 KGPEVMSFIEQGKRL---DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CHHHHHHHHHCCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 01111 1111111 11223345666788899999999999999999999865
No 124
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.06 E-value=5.3e-10 Score=117.36 Aligned_cols=110 Identities=20% Similarity=0.210 Sum_probs=67.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------ccCCC--ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDPH--ITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~~--~~~~~ 758 (818)
|+||++++++++|++|||+++.............|+..|+|||. .+....+.|+. ...+. ....+
T Consensus 129 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 208 (277)
T cd06640 129 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR 208 (277)
T ss_pred hhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh
Confidence 89999999999999999999877544333344578999999992 22222233321 11111 00001
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
....................+.+++..|++.+|++||+|.+|++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 209 VLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 111000011111133455677889999999999999999999754
No 125
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.06 E-value=1.5e-10 Score=121.22 Aligned_cols=108 Identities=22% Similarity=0.273 Sum_probs=64.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC--------Ccc-hHHHHhcc---------cCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH--------PQE-ILSLFSST---------SDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~--------~~~-~l~~~~~~---------~~~~~~ 755 (818)
++||+++++..+||+|||+++.............|+.+|+|||.. ..+ ..+.|... ..+...
T Consensus 139 ~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~ 218 (272)
T cd06637 139 GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 218 (272)
T ss_pred HHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 789999999999999999998765433334456799999999911 111 23333211 111100
Q ss_pred ccce----ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 756 LTYI----LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 756 ~~~~----~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.... ......... .........+.+++.+|++.+|.+||++.+|++
T Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 219 MHPMRALFLIPRNPAPR-LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCHHHHHHHHhcCCCCC-CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0000 000000000 001122345677888999999999999999875
No 126
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.06 E-value=3e-10 Score=117.39 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=65.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCc--cccccccceeCCCC----CCcchHHHHhc----------ccCCCc---
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNR--TLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPHI--- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~--~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~~--- 754 (818)
|+||+++.++++|++|||+++......... ....++..|+|||. ..+...+.|+. ...+..
T Consensus 122 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~ 201 (252)
T cd05084 122 ARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS 201 (252)
T ss_pred hheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 899999999999999999998654321111 12234567999992 11112222321 111110
Q ss_pred --cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 755 --TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 755 --~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.....++....... +......+.+++..|++.+|++||+|.+|.++|+.
T Consensus 202 ~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 202 NQQTREAIEQGVRLPC---PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHHHHHHHcCCCCCC---cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 01111111111111 22334567788889999999999999999999863
No 127
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.06 E-value=2.5e-10 Score=121.61 Aligned_cols=43 Identities=26% Similarity=0.279 Sum_probs=35.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++.............||+.|+|||
T Consensus 131 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE 173 (303)
T cd07869 131 PQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPD 173 (303)
T ss_pred HHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChH
Confidence 8999999999999999999986543333334567899999999
No 128
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.05 E-value=2e-10 Score=121.30 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=67.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHhcc----------cCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFSST----------SDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~~~----------~~~--~~~ 755 (818)
|+||++++++.+|++|||+++.+..... ......++..|+||| .......+.|+.. ..+ ...
T Consensus 158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~ 237 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA 237 (288)
T ss_pred HhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 8899999999999999999986543221 122334567899999 2222222233211 111 111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
..+++.....+.....+......+.+++.+|++.+|++||+|.|+++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 238 HEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111100011001112234567889999999999999999999999874
No 129
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.05 E-value=1.9e-10 Score=120.75 Aligned_cols=113 Identities=15% Similarity=0.131 Sum_probs=68.6
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhcc------------cCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSST------------SDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~~------------~~~~~~ 755 (818)
|+||++++++.+|++|||+++.+..... ......|+.+|+|||. .++...+.|+.. .+....
T Consensus 147 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 226 (277)
T cd05032 147 ARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS 226 (277)
T ss_pred hheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC
Confidence 8999999999999999999987643321 2234557889999991 111112223211 111111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
..++.+..........+......+.+++..|++.+|++||++.++++.|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 227 NEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111111111111101122335567789999999999999999999999863
No 130
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=3.6e-11 Score=117.49 Aligned_cols=128 Identities=30% Similarity=0.304 Sum_probs=58.5
Q ss_pred CCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEc
Q 003465 197 TQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSL 276 (818)
Q Consensus 197 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 276 (818)
+.|++|||++|.|+ .+..+..-++.++.|++++|.+... ..+..+++|+.|||++|.++ .+..+-..+.++++|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 44555555555554 2333344445555555555555421 22445555555555555544 22223334455555555
Q ss_pred cccccCCcCCcccCCCCCCCEEEccCCcCCCC-CchhhcCCCCCCeeeccCCcCC
Q 003465 277 NVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGP-IPPTLSHLTRLTTLKLFSNQIN 330 (818)
Q Consensus 277 ~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~ 330 (818)
+.|.+... ..++.+-+|..||+++|++... -...++++|.|+.+.|.+|.+.
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 55554422 2234444555555555554321 1122344444444444444443
No 131
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.05 E-value=9.9e-11 Score=125.83 Aligned_cols=108 Identities=15% Similarity=0.194 Sum_probs=62.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCC-cchHHHHhcccC---------C--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHP-QEILSLFSSTSD---------P--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~-~~~l~~~~~~~~---------~--~~~~~~ 758 (818)
|+|||+|.++.+||+|||+++............+||+.|+||| ..+ ....+.|+.+.. + ......
T Consensus 123 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~ 202 (323)
T cd05571 123 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 202 (323)
T ss_pred HHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH
Confidence 8999999999999999999986433333344567999999999 111 112333432211 1 110001
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~ 802 (818)
+......... ..+......+.++...|++.||++|| +..++++
T Consensus 203 ~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 203 LFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHcCCC-CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1110000000 00111223455677799999999999 7888764
No 132
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.05 E-value=3e-10 Score=118.64 Aligned_cols=108 Identities=21% Similarity=0.278 Sum_probs=67.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCCC--cccc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPH--ITLT- 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~--~~~~- 757 (818)
+.||++++++.+|++|||+++...... ..+...|+..|+||| .......+.|.. ...+. ....
T Consensus 142 ~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~ 220 (269)
T cd08528 142 PNNIMLGEDDKVTITDFGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS 220 (269)
T ss_pred HHHEEECCCCcEEEecccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH
Confidence 789999999999999999998765433 334567899999999 212222223321 11111 1000
Q ss_pred ---ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 758 ---YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 758 ---~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.+.+....... .......+.+++.+|++.+|++||+|.||..+++
T Consensus 221 ~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 221 LATKIVEAVYEPLP---EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHHhhccCCcCC---cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11111111111 1112345667888999999999999999999986
No 133
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=3.5e-11 Score=117.58 Aligned_cols=135 Identities=30% Similarity=0.311 Sum_probs=97.7
Q ss_pred hcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCC
Q 003465 313 LSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLK 392 (818)
Q Consensus 313 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 392 (818)
+..+..|+++||++|.|+ .+..+..-.|.++.|++++|.+... ..+..+++|+.|||++|.++. +..+-..+.+++
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEe
Confidence 344567778888888776 4555666677888888888887633 236778888888888888773 333445667888
Q ss_pred EEEccCCcCcccCCccccCCCCCCEEecccCcCccc-CCccccCCCCCCEEECcCCcCCccC
Q 003465 393 FLNLNSNKLNGSIPSELMNCFSLQSLILSNNSLTGR-IPSEIRNLSYLHELDLSLNFISGMT 453 (818)
Q Consensus 393 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~ 453 (818)
.|.|++|.+... +.+..+-+|..||+++|+|... -...++++|.|+.+.|.+|++.+..
T Consensus 356 tL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 356 TLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred eeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 888888887633 4567778888899999988632 1245788888999889898887653
No 134
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.05 E-value=1.6e-10 Score=121.52 Aligned_cols=105 Identities=19% Similarity=0.236 Sum_probs=62.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------ccCCCccc----
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDPHITL---- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~~~~~---- 756 (818)
|+||+++.++.+||+|||+++..... ..+...||..|+|||. ..+...+.|+. ...+....
T Consensus 123 p~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~ 200 (279)
T cd06619 123 PSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQ 200 (279)
T ss_pred HHHEEECCCCCEEEeeCCcceecccc--cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccc
Confidence 89999999999999999999876432 2334579999999992 11111222321 11111000
Q ss_pred -----cce----ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 757 -----TYI----LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 757 -----~~~----~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.+. .++...... .......+.+++..|++.+|++||++.||++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 201 GSLMPLQLLQCIVDEDPPVLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cccchHHHHHHHhccCCCCCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000 000000000 01122346678889999999999999998764
No 135
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.05 E-value=2.4e-10 Score=118.56 Aligned_cols=115 Identities=20% Similarity=0.252 Sum_probs=68.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccccccceeCCCC----CCcchHHHHh---------c-ccCCCc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPAK----HPQEILSLFS---------S-TSDPHI-- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE~----~~~~~l~~~~---------~-~~~~~~-- 754 (818)
|+||++++++.+|++|||+++........ .....++..|+|||. ......+.|+ . ...+..
T Consensus 123 p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~ 202 (257)
T cd05060 123 ARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEM 202 (257)
T ss_pred cceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccC
Confidence 89999999999999999999877543322 122334578999992 1111111221 1 111111
Q ss_pred cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 755 TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 755 ~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
...++..........+.+......+.+++.+|++.+|++||++.+|++.|+++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 203 KGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 001111110011110112233456778999999999999999999999998764
No 136
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.05 E-value=1.9e-10 Score=119.60 Aligned_cols=113 Identities=19% Similarity=0.218 Sum_probs=67.2
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC----CCCcchHHHHhc----------ccCC--Cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDP--HITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~--~~~~ 756 (818)
|+||+++++..+|++|||+++.+..... ......++..|+||| ..++...+.|+. ...+ ....
T Consensus 131 p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 131 ARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred hheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 8999999999999999999987753211 112233567899999 222222222321 1111 1111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
...++........+.+......+.+++.+|++.+|++||++.++.+.|+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 211 REVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11111111110001122234567788899999999999999999999875
No 137
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.05 E-value=2e-10 Score=120.75 Aligned_cols=113 Identities=13% Similarity=0.192 Sum_probs=66.9
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHh---------c-ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFS---------S-TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~---------~-~~~~~--~~ 755 (818)
|+|||+++++++||+|||+++....... ......+++.|+||| ..++...+.|+ . ...+. ..
T Consensus 150 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 229 (280)
T cd05092 150 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS 229 (280)
T ss_pred HhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC
Confidence 8999999999999999999986643221 122334678899999 22222122232 1 11111 10
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
..+.++....+.....+......+.+++..|++.+|++||++.+|.+.|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 230 NTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 011111111111101122234556788889999999999999999999863
No 138
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.04 E-value=2.9e-10 Score=120.01 Aligned_cols=43 Identities=30% Similarity=0.345 Sum_probs=35.4
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
|+||+++.++.+||+|||+++....... ......||.+|+|||
T Consensus 128 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 171 (287)
T cd07848 128 PENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPE 171 (287)
T ss_pred HHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcH
Confidence 8999999999999999999987754322 234567999999999
No 139
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.04 E-value=2e-10 Score=122.35 Aligned_cols=115 Identities=16% Similarity=0.190 Sum_probs=69.9
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhcc----------c--CCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSST----------S--DPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~~----------~--~~~~~ 755 (818)
|+||++++++.+|++|||+++....... .+....++..|+|||. ..+...+.|+.. . +....
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 8999999999999999999997754321 2233456788999991 111112223211 1 11111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..++.+..........+..+...+.+++.+|++.+|++||+|.||++.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 245 VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 11211111111100112234456777888999999999999999999998873
No 140
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.04 E-value=2.8e-10 Score=119.88 Aligned_cols=111 Identities=16% Similarity=0.181 Sum_probs=67.8
Q ss_pred ccccccCCCCcccccccccceeccCCCC---CccccccccceeCCC----CCCcchHHHHhcccC---------CCcc-c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPA----KHPQEILSLFSSTSD---------PHIT-L 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE----~~~~~~l~~~~~~~~---------~~~~-~ 756 (818)
|+||++|.++.+|++|||+++....... ......++..|+||| ..+....+.|..... +... .
T Consensus 137 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~ 216 (284)
T cd05038 137 ARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP 216 (284)
T ss_pred HHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence 8999999999999999999987753322 122334567799999 111111223332110 0000 0
Q ss_pred cc-------------------eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 757 TY-------------------ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 757 ~~-------------------~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.. .+...... +.+..+...+.+++.+|++.+|++||+|.||+++|+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 217 AEFLRMIGIAQGQMIVTRLLELLKEGERL---PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred chhccccccccccccHHHHHHHHHcCCcC---CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00 00000100 11223345678899999999999999999999999876
No 141
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.04 E-value=5.1e-10 Score=118.76 Aligned_cols=109 Identities=19% Similarity=0.209 Sum_probs=65.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcc---------cCCC--cc-cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSST---------SDPH--IT-LT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~---------~~~~--~~-~~ 757 (818)
|+||++++++.+||+|||+++.............|++.|+||| ..+....+.|+.. ..+. .. ..
T Consensus 143 p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~ 222 (297)
T cd06656 143 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (297)
T ss_pred HHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch
Confidence 8999999999999999999987654433334557899999999 2222223334311 1111 00 00
Q ss_pred ceecccCCCc-CccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YILDQRISPP-KKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~~d~~l~~~-~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
........+. ....+......+.+++..|++.+|++||+|.+|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 223 ALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred heeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000010 00111222334567788999999999999999986
No 142
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.04 E-value=3.5e-10 Score=118.49 Aligned_cols=107 Identities=24% Similarity=0.307 Sum_probs=65.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcc---------cCCC--ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSST---------SDPH--ITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~---------~~~~--~~~~~ 758 (818)
|+||++++++.++++|||+++.+...........|+.+|+||| ..+....+.|... ..+. ....+
T Consensus 126 p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~ 205 (274)
T cd06609 126 AANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR 205 (274)
T ss_pred HHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH
Confidence 7899999999999999999998765433344567899999999 2222222233211 1111 10001
Q ss_pred ee---cccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 IL---DQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~~---d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.. ........ . .......+.+++..|++.+|++||+|+++++
T Consensus 206 ~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 206 VLFLIPKNNPPSL-E-GNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHhhhcCCCCC-c-ccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 10 01111111 0 0002345667888999999999999999975
No 143
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.04 E-value=2.7e-10 Score=125.02 Aligned_cols=110 Identities=18% Similarity=0.191 Sum_probs=66.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCC---CCCcc-hHHHHhc----------ccCCCcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPA---KHPQE-ILSLFSS----------TSDPHIT-- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE---~~~~~-~l~~~~~----------~~~~~~~-- 755 (818)
|+|||++++..+||+|||+++........ .....++.+|+||| ..+.+ ..+.|+. ...+...
T Consensus 242 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~ 321 (375)
T cd05104 242 ARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP 321 (375)
T ss_pred hhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 89999999999999999999876543221 22344667899999 11111 1112211 1111110
Q ss_pred ----ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 ----LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ----~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
...++........ +......+.+++..|++.+|++||+|.||+++|++
T Consensus 322 ~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 322 VDSKFYKMIKEGYRMLS---PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred chHHHHHHHHhCccCCC---CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 0111111111111 11123456788889999999999999999999985
No 144
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.03 E-value=3.1e-10 Score=117.61 Aligned_cols=112 Identities=19% Similarity=0.246 Sum_probs=67.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC---CccccccccceeCCCC----CCcchHHHHhc----------ccCC--Cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDP--HI 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~--~~ 754 (818)
|+||+++.++.+|++|||+++.+..... ......++.+|+|||. .++...+.|+. ...+ ..
T Consensus 125 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 204 (257)
T cd05040 125 ARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL 204 (257)
T ss_pred cccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 8999999999999999999997754221 1234568899999992 22111122221 1111 11
Q ss_pred cccceecccC-CCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 755 TLTYILDQRI-SPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 755 ~~~~~~d~~l-~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
+..++..... .......+......+.+++..|++.+|++||++.+|++.|.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 205 SGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 1111111000 00000112223456778888999999999999999999886
No 145
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.03 E-value=2.4e-10 Score=119.43 Aligned_cols=114 Identities=18% Similarity=0.287 Sum_probs=66.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccc--cccceeCCCC----CCcchHHHHhc----------ccCCC-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIA--GTYRYIAPAK----HPQEILSLFSS----------TSDPH- 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~--gt~gy~aPE~----~~~~~l~~~~~----------~~~~~- 753 (818)
|+||++|.++.+|++|||+++........ ..... ++..|+|||. ..+...+.|+. ...+.
T Consensus 134 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~ 213 (269)
T cd05065 134 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 213 (269)
T ss_pred hheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCC
Confidence 89999999999999999999876433211 11122 2468999991 11112222321 11111
Q ss_pred -ccccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 754 -ITLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 754 -~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
....++.+........+.+.++...+.+++..|++.+|.+||+|.+|+..|+++
T Consensus 214 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 214 DMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000111111000000011223445677888999999999999999999998764
No 146
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.03 E-value=3.3e-10 Score=120.67 Aligned_cols=111 Identities=20% Similarity=0.272 Sum_probs=69.6
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHhcc----------cCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFSST----------SDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~~~----------~~~--~~~ 755 (818)
|+||+++++..+||+|||+++....... ......++..|+||| ...+...+.|+.. ..+ ...
T Consensus 137 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~ 216 (303)
T cd05110 137 ARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 216 (303)
T ss_pred cceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999997654322 123345678999999 2222122333311 111 100
Q ss_pred ---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 ---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..+++...... +.+..+...+.+++..|+..+|++||+|.+|++.|+.+
T Consensus 217 ~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 217 TREIPDLLEKGERL---PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred HHHHHHHHHCCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111111 11122345677889999999999999999999999987
No 147
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.03 E-value=2.3e-10 Score=121.02 Aligned_cols=111 Identities=19% Similarity=0.233 Sum_probs=68.8
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhc----------cc--CCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TS--DPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~--~~~~~ 755 (818)
|+|||+++++.+||+|||+++....... ......++..|+|||. ......+.|+. .. +....
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999986643221 1233456788999992 11111222321 11 11111
Q ss_pred ---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 ---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
+.+.++....... +......+.+++..|++.+|++||+|.++++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 235 PERLFNLLKTGYRMER---PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred HHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 1111222121111 222345677888999999999999999999999876
No 148
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=2.6e-10 Score=122.77 Aligned_cols=107 Identities=15% Similarity=0.121 Sum_probs=68.6
Q ss_pred ccccccCCC-CcccccccccceeccCCCCCccccccccceeCCC---CCC-cc--hHHHHhcc---------cCCCc--c
Q 003465 694 FNNILLNSE-FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHP-QE--ILSLFSST---------SDPHI--T 755 (818)
Q Consensus 694 ~~NILLd~~-~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~-~~--~l~~~~~~---------~~~~~--~ 755 (818)
++|||||.+ ++.||+|||+++..........+.+||+.|+||| .++ ++ ..+.|+.. ..+.. .
T Consensus 148 ~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~ 227 (370)
T KOG0583|consen 148 PENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN 227 (370)
T ss_pred HHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc
Confidence 799999999 9999999999998742223345678999999999 333 44 55666532 22221 1
Q ss_pred ccceecccCCCcCccchHHH-HHHHHHHHHhccCCCCCCCCChHHHH
Q 003465 756 LTYILDQRISPPKKQKIVQD-IALASIVALACLQSKPKSVPTMQRVS 801 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~-~~~~~~la~~C~~~~p~~RP~m~~V~ 801 (818)
...+......+.. ..+... -..+..++.+|++.+|.+|+++.+|+
T Consensus 228 ~~~l~~ki~~~~~-~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 228 VPNLYRKIRKGEF-KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHHHHHHhcCCc-cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1111111111111 111111 34456677799999999999999998
No 149
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.03 E-value=1.3e-11 Score=123.82 Aligned_cols=89 Identities=21% Similarity=0.289 Sum_probs=44.4
Q ss_pred cCCCCCCCEEEccCCcCCCC----CchhhcCCCCCCeeeccCCcCCCCcCccc-----cCCCCCCEEEcCCCccccc---
Q 003465 289 LGRLTSLSDLDLSHNSLFGP----IPPTLSHLTRLTTLKLFSNQINGSIPLGI-----GNLENLERVDMSSNKLEGP--- 356 (818)
Q Consensus 289 l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~l-----~~l~~L~~L~Ls~n~l~~~--- 356 (818)
+..+++|+.|||.+|-++.. +...++.+++|+.|++++|.+...-...+ ...++|+.|.+.+|.++..
T Consensus 209 l~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~ 288 (382)
T KOG1909|consen 209 LEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAAL 288 (382)
T ss_pred HHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHH
Confidence 34455555555555544322 22334445555555555555543222111 2345666666666665421
Q ss_pred -CCcCcCCCCCCCEEeccCCcC
Q 003465 357 -IPLTIGDLTNLIYLDLSLNQL 377 (818)
Q Consensus 357 -~~~~l~~l~~L~~L~Ls~n~l 377 (818)
+...+...+.|+.|+|++|.+
T Consensus 289 ~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 289 ALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHhcchhhHHhcCCcccc
Confidence 122334456677777777766
No 150
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.03 E-value=2.6e-10 Score=125.03 Aligned_cols=111 Identities=18% Similarity=0.195 Sum_probs=67.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCC---CCC-cchHHHHhc----------ccCCCcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPA---KHP-QEILSLFSS----------TSDPHIT-- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE---~~~-~~~l~~~~~----------~~~~~~~-- 755 (818)
|+|||+|++.++||+|||+++.+...... .....++.+|+||| ..+ +...+.|+. ...+...
T Consensus 240 p~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~ 319 (374)
T cd05106 240 ARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGIL 319 (374)
T ss_pred hheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccc
Confidence 89999999999999999999876443221 12334667899999 111 111222221 1111100
Q ss_pred ----ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 ----LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ----~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
...++........ +......+.+++..|++.+|++||+|.+|+++|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 320 VNSKFYKMVKRGYQMSR---PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred ccHHHHHHHHcccCccC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0111111111111 111234567788899999999999999999999875
No 151
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.03 E-value=4.3e-10 Score=117.31 Aligned_cols=109 Identities=20% Similarity=0.315 Sum_probs=63.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC------Ccc-hHHHHhcc---------cCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH------PQE-ILSLFSST---------SDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~------~~~-~l~~~~~~---------~~~~--~~ 755 (818)
|+||+++.++.+||+|||+++.............|+..|+|||.. +.+ ..+.|+.. ..+. ..
T Consensus 134 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~ 213 (267)
T cd06645 134 GANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred HHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc
Confidence 899999999999999999998764433333456799999999921 111 22333211 1110 00
Q ss_pred -cc---ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 756 -LT---YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 756 -~~---~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.. .....................+.+++..|++.+|++||++.+|++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 214 PMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred chhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00 000011111100000111234567888999999999999999875
No 152
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.03 E-value=9.9e-11 Score=138.01 Aligned_cols=132 Identities=26% Similarity=0.301 Sum_probs=93.0
Q ss_pred CCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcc--cccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCC
Q 003465 98 SCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNN--LTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRL 175 (818)
Q Consensus 98 ~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L 175 (818)
.+....+...+.+|.+.. ++... ..+.|++|-+..|. +....+..|..++.|++|||++|.--+.+|+.++.|-+|
T Consensus 520 ~~~~~~rr~s~~~~~~~~-~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~L 597 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIEH-IAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHL 597 (889)
T ss_pred cchhheeEEEEeccchhh-ccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhh
Confidence 344566777777766652 22222 23468888887775 443344457778888888888777666788888888888
Q ss_pred CEEEccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCc
Q 003465 176 SILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNK 232 (818)
Q Consensus 176 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 232 (818)
|+|+++++.+. .+|..+++|+.|.+|++..+.....+|.....+++|++|.+....
T Consensus 598 ryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 598 RYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 88888888877 678888888888888888776655556666668888888776543
No 153
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.03 E-value=3.1e-10 Score=118.65 Aligned_cols=115 Identities=13% Similarity=0.190 Sum_probs=69.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC----CCCcchHHHHh----------cccCC--Cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA----KHPQEILSLFS----------STSDP--HITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE----~~~~~~l~~~~----------~~~~~--~~~~ 756 (818)
|+||+++.+..+|++|||+++....... ..+...++..|+||| +.++...+.|. ....+ ....
T Consensus 135 p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~ 214 (270)
T cd05056 135 ARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN 214 (270)
T ss_pred hheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 8999999999999999999987754322 223344567899999 22221122221 11111 1111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
.+.......+.....+......+.+++.+|+..+|++||++.++++.|+++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 215 NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111110011000112233456777888999999999999999999998874
No 154
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.02 E-value=4.5e-10 Score=116.27 Aligned_cols=108 Identities=23% Similarity=0.295 Sum_probs=64.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcc---------cCCCccc---c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSST---------SDPHITL---T 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~---------~~~~~~~---~ 757 (818)
++||++++++++|++|||++..............|+.+|+||| ...+...+.|..+ ..+.... .
T Consensus 127 ~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~ 206 (256)
T cd06612 127 AGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR 206 (256)
T ss_pred cceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 8999999999999999999987754432334456899999999 2222222334211 1111000 0
Q ss_pred ce--ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YI--LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~--~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+ +........ ..+......+.+++..|++.+|++||+|.||++
T Consensus 207 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 207 AIFMIPNKPPPTL-SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhhhhccCCCCCC-CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 000000000 111122245677888999999999999999975
No 155
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.02 E-value=4.2e-10 Score=118.75 Aligned_cols=43 Identities=30% Similarity=0.288 Sum_probs=35.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+|++|||+++.+.......+...|+.+|+|||
T Consensus 128 p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 170 (286)
T cd07846 128 PENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPE 170 (286)
T ss_pred HHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcH
Confidence 8999999999999999999987755443344556899999999
No 156
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.02 E-value=4.7e-10 Score=121.02 Aligned_cols=41 Identities=34% Similarity=0.441 Sum_probs=34.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++.+... ......||..|+|||
T Consensus 132 p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~g~~~y~aPE 172 (331)
T cd06649 132 PSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPE 172 (331)
T ss_pred hhhEEEcCCCcEEEccCccccccccc--ccccCCCCcCcCCHh
Confidence 89999999999999999999866432 233457999999999
No 157
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.02 E-value=2.8e-10 Score=122.99 Aligned_cols=114 Identities=17% Similarity=0.255 Sum_probs=69.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC---CC-CcchHHHHhc----------ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA---KH-PQEILSLFSS----------TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE---~~-~~~~l~~~~~----------~~~~~--~~ 755 (818)
|+|||+|+++.+||+|||+++.+..... ......|+..|+||| .. .+...+.|+. ...+. ..
T Consensus 201 p~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~ 280 (337)
T cd05054 201 ARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ 280 (337)
T ss_pred cceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCC
Confidence 8999999999999999999987643322 123455778899999 11 1111222321 11111 00
Q ss_pred ccceecccCCC-cCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISP-PKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~-~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..+.+...+.. .....+......+.+++.+|++.+|++||++.||+++|+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 281 IDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred ccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 01111011100 00001122345678899999999999999999999999876
No 158
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.02 E-value=4.7e-10 Score=123.20 Aligned_cols=43 Identities=33% Similarity=0.363 Sum_probs=35.0
Q ss_pred ccccccCCCCcccccccccceeccCCC-CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS-SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~-~~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++++||+|||+++...... ...+...||..|+|||
T Consensus 131 p~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE 174 (372)
T cd07853 131 PGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPE 174 (372)
T ss_pred hHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHH
Confidence 899999999999999999998764332 2234456899999999
No 159
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.02 E-value=2.8e-10 Score=120.75 Aligned_cols=110 Identities=18% Similarity=0.193 Sum_probs=64.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCCC--ccc-c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPH--ITL-T 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~--~~~-~ 757 (818)
|+||+++.++.+||+|||+++.............|+..|+||| .......+.|.. ...+. ... .
T Consensus 144 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~ 223 (296)
T cd06654 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223 (296)
T ss_pred HHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 8999999999999999999987644333334457899999999 212122222321 11111 000 0
Q ss_pred ceecccCCCc-CccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 758 YILDQRISPP-KKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 758 ~~~d~~l~~~-~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.......... ....+......+.+++.+|++.+|++||++.+|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 224 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred hHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0000000000 001122223456678889999999999999999863
No 160
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=3.6e-11 Score=123.76 Aligned_cols=210 Identities=25% Similarity=0.219 Sum_probs=99.4
Q ss_pred cCCCcCceecccCcccccCCC--CCCCCCCCCcEEECcCCCCCCC--CccccCCCCCCCEEEccCCCCCCCCccC-CCCC
Q 003465 122 GALSKLQILDLSHNNLTGTIP--SKLGNLNNLVELYLSRSNLNGP--IPSTLGHLTRLSILDLSSNSLVGPIPFT-LGHL 196 (818)
Q Consensus 122 ~~l~~L~~L~Ls~n~l~~~~p--~~~~~l~~L~~L~Ls~n~l~~~--~p~~l~~l~~L~~L~L~~n~l~~~~~~~-l~~l 196 (818)
.++++|+...|.++.+.. .+ .....|++++.|||+.|-+..- +-.....|++|+.|+|+.|.+....... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 355666666666665542 22 2445566666666666655421 1122345666666666666554221111 1134
Q ss_pred CCCcEEEcccCcCCccC-CccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEE
Q 003465 197 TQLTTLKLFSNQINGCI-PLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLS 275 (818)
Q Consensus 197 ~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 275 (818)
++|+.|.|+.|.++... ...+..+++|+.|++.+|.....-......++.|+.|||++|++... +
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~-~------------- 262 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDF-D------------- 262 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccc-c-------------
Confidence 55555555555554211 11122345555555555532222222223344455555554444321 1
Q ss_pred ccccccCCcCCcccCCCCCCCEEEccCCcCCCC-Cchh-----hcCCCCCCeeeccCCcCCCC-cCccccCCCCCCEEEc
Q 003465 276 LNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGP-IPPT-----LSHLTRLTTLKLFSNQINGS-IPLGIGNLENLERVDM 348 (818)
Q Consensus 276 L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~-~~~~-----l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L 348 (818)
.-...+.++.|..|+++.+.+... .|+. ...+++|++|++..|++... .-..+..+++|+.|.+
T Consensus 263 ---------~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~ 333 (505)
T KOG3207|consen 263 ---------QGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRI 333 (505)
T ss_pred ---------cccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhc
Confidence 002234445555555555554432 1111 23456777777777766421 1122444566777777
Q ss_pred CCCcccc
Q 003465 349 SSNKLEG 355 (818)
Q Consensus 349 s~n~l~~ 355 (818)
..|.+..
T Consensus 334 ~~n~ln~ 340 (505)
T KOG3207|consen 334 TLNYLNK 340 (505)
T ss_pred ccccccc
Confidence 7777763
No 161
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.02 E-value=5.5e-10 Score=117.97 Aligned_cols=43 Identities=26% Similarity=0.306 Sum_probs=35.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++++||+|||+++.............||..|+|||
T Consensus 131 p~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE 173 (288)
T cd07871 131 PQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPD 173 (288)
T ss_pred HHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChH
Confidence 8999999999999999999987644333334567899999999
No 162
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.02 E-value=4.2e-10 Score=116.22 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=66.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCCC----CCcchHHHHhc----------ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~~ 755 (818)
|+||+++++..+|++|||+++........ .....++..|+|||. .+....+.|.. ...+. ..
T Consensus 121 p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~ 200 (251)
T cd05041 121 ARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS 200 (251)
T ss_pred cceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC
Confidence 89999999999999999999876432211 122334678999992 12112222321 11111 00
Q ss_pred ---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 ---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
..+.++...... .+......+.+++..|++.+|++||++.||++.|+.
T Consensus 201 ~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 201 NQQTRERIESGYRMP---APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHHHHHHHhcCCCCC---CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 111111111111 122334567788899999999999999999998863
No 163
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.02 E-value=1.8e-10 Score=124.11 Aligned_cols=109 Identities=14% Similarity=0.164 Sum_probs=62.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---CCc-chHHHHhc---------ccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---HPQ-EILSLFSS---------TSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~~~-~~l~~~~~---------~~~~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++............+||++|+|||. ... ...+.|+. ...+ .....+
T Consensus 123 p~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~ 202 (328)
T cd05593 123 LENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 202 (328)
T ss_pred HHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH
Confidence 89999999999999999999865333333445689999999991 111 11222321 1111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~~ 803 (818)
+......... ..+......+.++...|++.+|++|| ++.|+++.
T Consensus 203 ~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 203 LFELILMEDI-KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHhccCCc-cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1111111110 00111123455677799999999997 78887743
No 164
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.02 E-value=5.4e-10 Score=118.48 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=67.4
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHhcc-----------cCCCc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFSST-----------SDPHI-- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~~~-----------~~~~~-- 754 (818)
|+||++++++.+|++|||+++.+..... ......++..|+||| ...+...+.|+.. ..+..
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~ 236 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL 236 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc
Confidence 8999999999999999999987643321 123345678999999 2222222333211 11100
Q ss_pred cccceec-------ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 755 TLTYILD-------QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 755 ~~~~~~d-------~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
...+++. ..........+......+.+++.+|++.+|++||+|.+|++.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 237 SDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred ChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 0011110 000000000111234568889999999999999999999999863
No 165
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.01 E-value=4.5e-10 Score=116.43 Aligned_cols=109 Identities=15% Similarity=0.199 Sum_probs=65.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcc-----------cCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSST-----------SDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~-----------~~~~~~~~~ 758 (818)
|+||++++++.+|++|||+++.............|+..|+||| +......+.|... .+......+
T Consensus 130 p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~ 209 (257)
T cd08223 130 TQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS 209 (257)
T ss_pred chhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 8999999999999999999987754333344567899999999 1111122233211 111111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+......+.....+......+.+++..|++.+|++||+|.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 210 LVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111111110111223345677888999999999999999875
No 166
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.01 E-value=5.2e-10 Score=116.09 Aligned_cols=112 Identities=19% Similarity=0.206 Sum_probs=68.5
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCCC----CCcchHHHHh----------c--ccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPAK----HPQEILSLFS----------S--TSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE~----~~~~~l~~~~----------~--~~~~~~~ 755 (818)
|+||++++++.+|++|||.++...... .......++..|+|||. ......+.|+ . ..+....
T Consensus 133 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 212 (262)
T cd00192 133 ARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS 212 (262)
T ss_pred cceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC
Confidence 899999999999999999999875432 22345668899999991 1111112221 1 1111111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
..++.+....+.....+......+.+++..|++.+|++||++.++++.|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 213 NEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11111111111111112233456778888999999999999999999874
No 167
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.01 E-value=1.8e-10 Score=123.56 Aligned_cols=103 Identities=16% Similarity=0.145 Sum_probs=60.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhc---------ccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSS---------TSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~---------~~~~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++.............||++|+||| ....+ ..+.|+. ...+ .....+
T Consensus 124 p~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~ 203 (320)
T cd05590 124 LDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD 203 (320)
T ss_pred HHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH
Confidence 8999999999999999999986543333445578999999999 11111 2223321 1111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCCh
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTM 797 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 797 (818)
+......... ..+......+.++...|++.+|++||++
T Consensus 204 ~~~~i~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 204 LFEAILNDEV-VYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHhcCCC-CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1111111110 0011122345667779999999999998
No 168
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.01 E-value=3.5e-10 Score=119.96 Aligned_cols=108 Identities=19% Similarity=0.266 Sum_probs=64.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcc---------cCCCcc---cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSST---------SDPHIT---LT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~---------~~~~~~---~~ 757 (818)
|+||++++++.+||+|||+++.............|+.+|+||| +.+....+.|... ..+... ..
T Consensus 143 p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~ 222 (296)
T cd06655 143 SDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (296)
T ss_pred HHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 8999999999999999999987654433334457899999999 2222223334311 111100 00
Q ss_pred ce--ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YI--LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~--~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
++ +........ ..+......+.+++..|++.+|++||++.+|++
T Consensus 223 ~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 223 ALYLIATNGTPEL-QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHhcCCccc-CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00 000000000 011122334566788999999999999999884
No 169
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.01 E-value=7.3e-10 Score=117.57 Aligned_cols=113 Identities=13% Similarity=0.144 Sum_probs=67.4
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCC----CCCcchHHHHhc-----------ccCCC--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPA----KHPQEILSLFSS-----------TSDPH--I 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE----~~~~~~l~~~~~-----------~~~~~--~ 754 (818)
|+||++++++.+|++|||+++.+.... .......++.+|+||| .......+.|+. ...+. .
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 899999999999999999998764332 1233456788999999 122221222221 11111 0
Q ss_pred cccceecccCC-------CcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 755 TLTYILDQRIS-------PPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 755 ~~~~~~d~~l~-------~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
...++++.... ....+.+......+.+++..|++.+|++||+|.||++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 238 TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 01111110000 00001112233568889999999999999999999999863
No 170
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.01 E-value=2e-10 Score=121.49 Aligned_cols=106 Identities=22% Similarity=0.243 Sum_probs=69.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCC------------------CCCcc------hHHHHh
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPA------------------KHPQE------ILSLFS 747 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE------------------~~~~~------~l~~~~ 747 (818)
|.|.|+- .+..|+.|||+|+.+..+... .-.-+||+-||+|| .++.| .+...+
T Consensus 488 PANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 488 PANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV 566 (677)
T ss_pred cccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence 8898886 467999999999998777543 23467999999999 12222 233333
Q ss_pred cccCCCc-------cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 748 STSDPHI-------TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 748 ~~~~~~~-------~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
....+.+ .+..+.||.-.-.+...+ .-..++++|..|++.||++||+..|+++
T Consensus 567 YgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~--~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 567 YGKTPFGQIINQIAKLHAITDPNHEIEFPDIP--ENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hcCCchHHHHHHHHHHHhhcCCCccccccCCC--CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 3333322 234556664322221111 1122778889999999999999999885
No 171
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.00 E-value=4.6e-10 Score=121.61 Aligned_cols=43 Identities=33% Similarity=0.373 Sum_probs=34.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC---CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++....... ......||..|+|||
T Consensus 131 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE 176 (338)
T cd07859 131 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 176 (338)
T ss_pred HHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHH
Confidence 8999999999999999999986533221 224567999999999
No 172
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.00 E-value=2.2e-10 Score=118.72 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=67.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------c--cCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------T--SDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~--~~~~~~~~~ 758 (818)
++||+++.+.++||+|||+++.............|+..|+||| +.++...+.|.. . .+......+
T Consensus 129 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08218 129 SQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN 208 (256)
T ss_pred HHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence 8999999999999999999987644332233456899999999 222111122221 1 111122222
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+++..+.+.....+......+.+++..|++.+|.+||+|.+|++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 209 LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 23332322221122333456778888999999999999999986
No 173
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.00 E-value=4.8e-10 Score=116.08 Aligned_cols=110 Identities=19% Similarity=0.211 Sum_probs=66.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcccC---------C--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSSTSD---------P--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~~~---------~--~~~~~~ 758 (818)
|+||++++++.++++|||+++.............|+..|+||| ...+...+.|..... + ......
T Consensus 128 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~ 207 (255)
T cd08219 128 SKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN 207 (255)
T ss_pred cceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH
Confidence 8999999999999999999987754433344567999999999 222223344432211 1 000000
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.......+...+.+......+.+++.+|++.+|++||++.+|+.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 208 LILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 100001111101111223346677889999999999999999865
No 174
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.00 E-value=6.8e-10 Score=116.98 Aligned_cols=43 Identities=30% Similarity=0.351 Sum_probs=34.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++|+++.+|++|||+++.............++.+|+|||
T Consensus 128 p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 170 (284)
T cd07860 128 PQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 170 (284)
T ss_pred HHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCe
Confidence 7899999999999999999987654333334456789999999
No 175
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.00 E-value=3.8e-10 Score=119.06 Aligned_cols=109 Identities=22% Similarity=0.230 Sum_probs=64.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC---------CcchHHHHhcc---------cCC--C
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH---------PQEILSLFSST---------SDP--H 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~---------~~~~l~~~~~~---------~~~--~ 753 (818)
++||++++++.+|++|||+++.+...........|+.+|+|||.- .....+.|+.. ..+ .
T Consensus 152 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~ 231 (286)
T cd06638 152 GNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLAD 231 (286)
T ss_pred HHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCC
Confidence 899999999999999999998765433333445799999999921 01122233211 111 1
Q ss_pred cc-ccceec--ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 754 IT-LTYILD--QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 754 ~~-~~~~~d--~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.. ...+.. ....... ..+......+..++..|++.+|++||++.||++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 232 LHPMRALFKIPRNPPPTL-HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CchhHHHhhccccCCCcc-cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00 011000 0000000 0011112346678889999999999999999875
No 176
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.00 E-value=5.9e-10 Score=115.81 Aligned_cols=110 Identities=15% Similarity=0.250 Sum_probs=66.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCCC----CCcchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~~~ 756 (818)
|+||+++.++.+|++|||+++....... ......++..|+|||. ..+...+.|.. ...+. ...
T Consensus 130 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 130 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred cceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 8999999999999999999987643322 2233456788999992 11111122221 11111 100
Q ss_pred ccee---cccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 757 TYIL---DQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 757 ~~~~---d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.++. ....... ........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 210 ~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 210 PEVIRALERGYRMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHHhCCCCCC---CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111 1111111 112233457778889999999999999999999975
No 177
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.00 E-value=4.9e-10 Score=117.62 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=65.1
Q ss_pred ccccccCCCC---cccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHhc----------ccCC--
Q 003465 694 FNNILLNSEF---EAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDP-- 752 (818)
Q Consensus 694 ~~NILLd~~~---~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~-- 752 (818)
|+||+++.++ .+|++|||+++.+..... ......++..|+||| ...+...+.|.. ...+
T Consensus 144 p~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~ 223 (277)
T cd05036 144 ARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYP 223 (277)
T ss_pred hheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 8999998754 699999999987633211 112233457899999 222222233321 1111
Q ss_pred CccccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 753 HITLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 753 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.....++.+..........+......+.+++..|++.+|++||++.+|++.|.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 224 GRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred CCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 111111111111110001122334567788899999999999999999998863
No 178
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.99 E-value=5.8e-10 Score=117.57 Aligned_cols=114 Identities=14% Similarity=0.199 Sum_probs=68.4
Q ss_pred ccccccCCCCcccccccccceeccCCCC---CccccccccceeCCC----CCCcchHHHHhcccC---------CCc---
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPA----KHPQEILSLFSSTSD---------PHI--- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE----~~~~~~l~~~~~~~~---------~~~--- 754 (818)
|+||++++++.+|++|||+++.+..... ......|+..|+||| ..++...+.|+.... +..
T Consensus 137 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~ 216 (284)
T cd05079 137 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM 216 (284)
T ss_pred hheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc
Confidence 8999999999999999999987654322 123456777899999 222221222322111 000
Q ss_pred -cccceecccC-------------CCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 755 -TLTYILDQRI-------------SPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 755 -~~~~~~d~~l-------------~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
...+.+.+.- .+...+.+......+.+++..|++.+|++||++.+|++.|+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 217 TLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred chhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000000000 0000011122345678899999999999999999999999865
No 179
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.99 E-value=6.6e-10 Score=121.20 Aligned_cols=42 Identities=29% Similarity=0.271 Sum_probs=34.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++..... .......||..|+|||
T Consensus 147 p~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE 188 (355)
T cd07874 147 PSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPE 188 (355)
T ss_pred hHHEEECCCCCEEEeeCcccccCCCc-cccCCccccCCccCHH
Confidence 89999999999999999999865332 2233457999999999
No 180
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.99 E-value=2.4e-10 Score=122.99 Aligned_cols=43 Identities=26% Similarity=0.427 Sum_probs=35.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++.............||.+|+|||
T Consensus 129 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 171 (324)
T cd05587 129 LDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPE 171 (324)
T ss_pred HHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChh
Confidence 8999999999999999999986433333344567999999999
No 181
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.99 E-value=1.7e-10 Score=124.13 Aligned_cols=104 Identities=20% Similarity=0.245 Sum_probs=61.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhccc---------CC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSSTS---------DP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~~---------~~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++.............||+.|+||| ..+.+ ..+.|+... .+ .....+
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~ 203 (323)
T cd05575 124 PENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE 203 (323)
T ss_pred HHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH
Confidence 8999999999999999999986533333445678999999999 11211 223333211 11 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQ 798 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 798 (818)
+.+..+.... .........+.++...|++.+|++||++.
T Consensus 204 ~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 204 MYDNILNKPL-RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1111111110 00111233456677799999999999985
No 182
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.99 E-value=3.1e-11 Score=121.02 Aligned_cols=89 Identities=22% Similarity=0.235 Sum_probs=42.7
Q ss_pred cCCCCCCCEEeccCCcCCCC----CCcccCCCCCCCEEEccCCcCcccCCccc-----cCCCCCCEEecccCcCccc---
Q 003465 361 IGDLTNLIYLDLSLNQLSGP----IPSTFGHLTLLKFLNLNSNKLNGSIPSEL-----MNCFSLQSLILSNNSLTGR--- 428 (818)
Q Consensus 361 l~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~--- 428 (818)
+..+++|+.|||.+|-++.. +...+..+++|+.|++++|.+...-...+ ...++|+.|.+.+|.|+..
T Consensus 209 l~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~ 288 (382)
T KOG1909|consen 209 LEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAAL 288 (382)
T ss_pred HHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHH
Confidence 33444455555544444321 22234444555555555555543221111 1245666666666666431
Q ss_pred -CCccccCCCCCCEEECcCCcC
Q 003465 429 -IPSEIRNLSYLHELDLSLNFI 449 (818)
Q Consensus 429 -~p~~l~~l~~L~~L~Ls~N~l 449 (818)
+...+...+.|..|+|++|.+
T Consensus 289 ~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 289 ALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHhcchhhHHhcCCcccc
Confidence 112233456666777777766
No 183
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.99 E-value=3.1e-10 Score=121.53 Aligned_cols=43 Identities=26% Similarity=0.468 Sum_probs=36.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+++............+||.+|+|||
T Consensus 124 p~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE 166 (316)
T cd05592 124 LDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPE 166 (316)
T ss_pred HHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHH
Confidence 8999999999999999999987544333445678999999999
No 184
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.98 E-value=1.1e-09 Score=118.87 Aligned_cols=40 Identities=30% Similarity=0.371 Sum_probs=34.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++..... .+...||..|+|||
T Consensus 146 p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE 185 (343)
T cd07878 146 PSNVAVNEDCELRILDFGLARQADDE---MTGYVATRWYRAPE 185 (343)
T ss_pred hhhEEECCCCCEEEcCCccceecCCC---cCCccccccccCch
Confidence 89999999999999999999876432 23457899999999
No 185
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.98 E-value=5.1e-10 Score=118.81 Aligned_cols=113 Identities=14% Similarity=0.193 Sum_probs=66.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---CC-cchHHHHhc----------ccCC--Ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---HP-QEILSLFSS----------TSDP--HITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~~-~~~l~~~~~----------~~~~--~~~~~ 757 (818)
|+|||+++++.+||+|||+++...... .......+.+|+|||. .+ +...+.|+. ...+ .....
T Consensus 147 p~Nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~ 225 (297)
T cd05089 147 ARNVLVGENLASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA 225 (297)
T ss_pred cceEEECCCCeEEECCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 899999999999999999987532211 1122234568999992 12 112233321 1111 11111
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
++.+....+...+.+......+.+++.+|++.+|.+||+|.+|+++|+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 226 ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111100011222334567888899999999999999999999887
No 186
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.98 E-value=3.1e-10 Score=121.88 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=61.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---CCc-chHHHHhc---------ccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---HPQ-EILSLFSS---------TSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~~~-~~l~~~~~---------~~~~--~~~~~~ 758 (818)
|+|||+|.++.+||+|||+++.............||++|+|||. ... ...+.|+. ...+ .....+
T Consensus 123 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~ 202 (323)
T cd05595 123 LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 202 (323)
T ss_pred HHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence 89999999999999999999864333333345679999999992 111 12223321 1111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~ 802 (818)
.......... ..+......+.++...|++.+|++|| ++.++++
T Consensus 203 ~~~~~~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 203 LFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1111111100 00111223445677799999999998 7777764
No 187
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.97 E-value=8.5e-10 Score=119.06 Aligned_cols=41 Identities=34% Similarity=0.441 Sum_probs=33.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++..... ......||..|+|||
T Consensus 132 p~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~y~aPE 172 (333)
T cd06650 132 PSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPE 172 (333)
T ss_pred hhhEEEcCCCCEEEeeCCcchhhhhh--ccccCCCCccccCHH
Confidence 89999999999999999999865332 223457999999999
No 188
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.97 E-value=6.7e-10 Score=114.96 Aligned_cols=107 Identities=18% Similarity=0.251 Sum_probs=64.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc----------cc--CCCcccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS----------TS--DPHITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~--~~~~~~~ 757 (818)
|+||+++.++.+|++|||+++..... ......+..|+|||. ..+...+.|+. .. +......
T Consensus 128 p~nili~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 204 (254)
T cd05083 128 ARNILVSEDGVAKVSDFGLARVGSMG---VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK 204 (254)
T ss_pred cceEEEcCCCcEEECCCccceecccc---CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH
Confidence 89999999999999999999865332 122334578999992 11111122221 11 1111111
Q ss_pred ce---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 758 YI---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 758 ~~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
+. +........ +......+.+++.+|++.+|++||+|.+|++.|++
T Consensus 205 ~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 205 EVKECVEKGYRMEP---PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHhCCCCCCC---CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11 111111111 12234556788889999999999999999999874
No 189
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.97 E-value=4.6e-10 Score=121.26 Aligned_cols=107 Identities=12% Similarity=0.161 Sum_probs=62.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCc-chHHHHhcc---------cCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQ-EILSLFSST---------SDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~-~~l~~~~~~---------~~~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++.... ......||++|+||| .... ...+.|+.. ..+ .....+
T Consensus 129 p~Nil~~~~~~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~ 205 (333)
T cd05600 129 PENFLIDASGHIKLTDFGLSKGIVT---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE 205 (333)
T ss_pred HHHEEECCCCCEEEEeCcCCccccc---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH
Confidence 8999999999999999999986543 234567999999999 1111 122233211 111 111111
Q ss_pred eec------ccCCCcCccc-hHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILD------QRISPPKKQK-IVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d------~~l~~~~~~~-~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
... ..+....... .......+.++...|++.+|++||++.++++.
T Consensus 206 ~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 206 TWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 100 0010000000 00112345567779999999999999999854
No 190
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.97 E-value=2.6e-10 Score=122.65 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=60.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc---------cCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST---------SDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~---------~~~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++............+||+.|+||| ..+.+ ..+.|+.. ..+ .....+
T Consensus 129 p~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~ 208 (323)
T cd05616 129 LDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 208 (323)
T ss_pred HHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH
Confidence 8999999999999999999986543333445678999999999 22211 22333311 111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCCh
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTM 797 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 797 (818)
+......... ..+......+.+++..|++.+|.+|++.
T Consensus 209 ~~~~i~~~~~-~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 209 LFQSIMEHNV-AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHHhCCC-CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1111111100 0011223445678889999999999984
No 191
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.97 E-value=3.7e-10 Score=121.34 Aligned_cols=108 Identities=18% Similarity=0.185 Sum_probs=62.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---CCcc-hHHHHh---------cccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---HPQE-ILSLFS---------STSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~~~~-~l~~~~---------~~~~~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++.............||++|+|||. .+.+ ..+.|+ ....+ .....+
T Consensus 128 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~ 207 (323)
T cd05584 128 PENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK 207 (323)
T ss_pred HHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH
Confidence 89999999999999999999865443333455689999999991 1111 122222 11111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~ 802 (818)
.++....+.. ..+......+.+++..|++.+|++|| ++.++.+
T Consensus 208 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 208 TIDKILKGKL-NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHHcCCC-CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1111111111 11111223456777899999999999 6676654
No 192
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.97 E-value=7.2e-10 Score=116.04 Aligned_cols=114 Identities=13% Similarity=0.203 Sum_probs=68.4
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC---CCc-chHHHHhcc----------cCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK---HPQ-EILSLFSST----------SDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~---~~~-~~l~~~~~~----------~~~~--~~ 755 (818)
|+||++++++.+|++|||+++....+.. ......++..|++||. ... ...+.|+.. ..+. ..
T Consensus 141 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~ 220 (273)
T cd05074 141 ARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE 220 (273)
T ss_pred hhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC
Confidence 8999999999999999999987643321 1223456678999991 111 122233211 1110 00
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..+.............+......+.+++.+|++.+|++||++.+|.+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 221 NSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0011110001100011122345788899999999999999999999999875
No 193
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.97 E-value=8.4e-10 Score=117.08 Aligned_cols=109 Identities=17% Similarity=0.217 Sum_probs=63.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCCCc--cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPHI--TLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~~--~~~~ 758 (818)
++||++|+++.+||+|||+++.............|+.+|+||| ..+....+.|+. ...+.. ...+
T Consensus 145 p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 224 (297)
T cd06659 145 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ 224 (297)
T ss_pred HHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 7899999999999999999986654433334567999999999 112112223321 111110 0000
Q ss_pred ---eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ---ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ---~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.+........ .........+.+++..|++.+|++||++.+|++.
T Consensus 225 ~~~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 225 AMKRLRDSPPPKL-KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHhccCCCCc-cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000 0011112345667779999999999999999973
No 194
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.97 E-value=3e-10 Score=122.05 Aligned_cols=43 Identities=33% Similarity=0.485 Sum_probs=35.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++.............||++|+|||
T Consensus 124 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 166 (321)
T cd05591 124 LDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPE 166 (321)
T ss_pred HHHeEECCCCCEEEeecccceecccCCccccccccCccccCHH
Confidence 8999999999999999999986543333345567999999999
No 195
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.96 E-value=8.5e-10 Score=117.36 Aligned_cols=111 Identities=19% Similarity=0.184 Sum_probs=67.6
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhc----------ccCCCcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPHIT-- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~~~-- 755 (818)
|+|||++.+..+|++|||+++....... ......++..|+|||. .++...+.|+. ...+...
T Consensus 169 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~ 248 (302)
T cd05055 169 ARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMP 248 (302)
T ss_pred cceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCC
Confidence 8999999999999999999987643322 1123346788999992 11122223321 1111100
Q ss_pred ----ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 ----LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ----~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..+.++....... +......+.+++..|++.+|++||++.||++.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 249 VDSKFYKLIKEGYRMAQ---PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred chHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0111111111111 111234577788899999999999999999999863
No 196
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.96 E-value=9.8e-10 Score=115.85 Aligned_cols=43 Identities=26% Similarity=0.274 Sum_probs=34.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++.............|+..|+|||
T Consensus 129 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 171 (285)
T cd07861 129 PQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPE 171 (285)
T ss_pred HHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChH
Confidence 8999999999999999999987643333333446789999999
No 197
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.96 E-value=3.5e-10 Score=121.64 Aligned_cols=103 Identities=15% Similarity=0.154 Sum_probs=59.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCC-cchHHHHhc---------ccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHP-QEILSLFSS---------TSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~-~~~l~~~~~---------~~~~--~~~~~~ 758 (818)
|+||++|+++.+||+|||+++............+||++|+||| ... ....+.|+. ...+ .....+
T Consensus 129 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~ 208 (324)
T cd05589 129 LDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE 208 (324)
T ss_pred HHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH
Confidence 8999999999999999999986433333345578999999999 111 112223321 1111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCCh
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTM 797 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 797 (818)
+.+....... ..+......+.+++..|++.+|.+||++
T Consensus 209 ~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 209 VFDSIVNDEV-RYPRFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred HHHHHHhCCC-CCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 1111111110 0011123345677889999999999954
No 198
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.96 E-value=2.3e-10 Score=123.12 Aligned_cols=110 Identities=20% Similarity=0.218 Sum_probs=63.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcccC---------C--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSSTSD---------P--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~~~---------~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++............+||.+|+||| ..+.+ ..+.|+.... + .....+
T Consensus 124 p~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~ 203 (325)
T cd05604 124 PENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE 203 (325)
T ss_pred HHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH
Confidence 8999999999999999999986433333345678999999999 22221 2233432211 1 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
+.+..+.... .........+.++...|++.+|.+||++++.++++
T Consensus 204 ~~~~~~~~~~-~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 204 MYDNILHKPL-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred HHHHHHcCCc-cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 1111111110 00011123345677799999999999987544443
No 199
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.96 E-value=4e-10 Score=121.87 Aligned_cols=109 Identities=17% Similarity=0.121 Sum_probs=70.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc--hHHHHhcc-----------cCCCcccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE--ILSLFSST-----------SDPHITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~--~l~~~~~~-----------~~~~~~~~ 757 (818)
|.|+|||++...||||||+|-+-..+ ..-.+-||++.|.||| .+|++ ..+.|..+ .+.++++.
T Consensus 140 pENlLLd~~~nIKIADFGMAsLe~~g-klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir 218 (786)
T KOG0588|consen 140 PENLLLDVKNNIKIADFGMASLEVPG-KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR 218 (786)
T ss_pred chhhhhhcccCEeeeccceeecccCC-ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH
Confidence 89999999999999999999764333 3344568999999999 55555 33445422 22233344
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
.++.+.-.+.+ +-+..-..++-.+....+..||+.|-||.||.+.-
T Consensus 219 ~LLlKV~~G~f-~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 219 VLLLKVQRGVF-EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHHHHHcCcc-cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 44333333332 11111122333455588899999999999998753
No 200
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=1e-10 Score=120.51 Aligned_cols=112 Identities=28% Similarity=0.237 Sum_probs=50.7
Q ss_pred CCCCCcEEEccccccCCcCCcc-cCCCCCCCEEEccCCcCCCC-CchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCC
Q 003465 267 YLENLVYLSLNVNNLTGPIPST-LGRLTSLSDLDLSHNSLFGP-IPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLE 344 (818)
Q Consensus 267 ~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~Ls~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 344 (818)
.+++|+.|+|+.|.+....... -..+++|+.|.|+.|.++-. +...+..+|+|+.|+|..|............+..|+
T Consensus 170 qLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~ 249 (505)
T KOG3207|consen 170 QLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQ 249 (505)
T ss_pred hcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHh
Confidence 3444455555544443211111 01345555666666555421 112233456666666666542212222223345566
Q ss_pred EEEcCCCcccccC-CcCcCCCCCCCEEeccCCcCC
Q 003465 345 RVDMSSNKLEGPI-PLTIGDLTNLIYLDLSLNQLS 378 (818)
Q Consensus 345 ~L~Ls~n~l~~~~-~~~l~~l~~L~~L~Ls~n~l~ 378 (818)
.|+|++|++.... ....+.++.|+.|+++.|.+.
T Consensus 250 ~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 250 ELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred hccccCCcccccccccccccccchhhhhccccCcc
Confidence 6666666554211 123445556666666655554
No 201
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.95 E-value=5.8e-10 Score=111.13 Aligned_cols=55 Identities=27% Similarity=0.295 Sum_probs=45.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC-----CCCcchHHHHhc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA-----KHPQEILSLFSS 748 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE-----~~~~~~l~~~~~ 748 (818)
+||+|+...+..|||||||||.+...-...|..+-|..|-||| +.....++.|+.
T Consensus 205 ~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSv 264 (419)
T KOG0663|consen 205 TSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSV 264 (419)
T ss_pred hhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhH
Confidence 8999999999999999999999876655677788999999999 222235677764
No 202
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.95 E-value=9.2e-10 Score=114.79 Aligned_cols=43 Identities=26% Similarity=0.389 Sum_probs=34.1
Q ss_pred ccccccCCCCcccccccccceeccCCC---CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS---SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~---~~~~~~~gt~gy~aPE 736 (818)
++||++|+++.+||+|||+++.+.... .......|+.+|+|||
T Consensus 134 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 179 (266)
T cd06651 134 GANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPE 179 (266)
T ss_pred HHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHH
Confidence 899999999999999999998764321 1223456899999999
No 203
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.95 E-value=1.1e-09 Score=119.66 Aligned_cols=42 Identities=29% Similarity=0.267 Sum_probs=34.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+++..... ...+...||.+|+|||
T Consensus 151 p~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE 192 (359)
T cd07876 151 PSNIVVKSDCTLKILDFGLARTACTN-FMMTPYVVTRYYRAPE 192 (359)
T ss_pred HHHEEECCCCCEEEecCCCccccccC-ccCCCCcccCCCCCch
Confidence 89999999999999999999865332 2234467899999999
No 204
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.95 E-value=1.1e-09 Score=113.41 Aligned_cols=111 Identities=17% Similarity=0.198 Sum_probs=65.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCcc-ccccccceeCCCC----CCcchHHHHhc----------ccCCC--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRT-LIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~-~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~~~ 756 (818)
++||++|+++.+|++|||+++.......... ...+++.|+|||. .+....+.|.. ...+. ...
T Consensus 131 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~ 210 (258)
T smart00219 131 ARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN 210 (258)
T ss_pred cceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 8999999999999999999987754422211 2347889999992 12111222221 11111 111
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
.++...................+.+++.+|+..+|++||++.|+++.|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 211 EEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111110000000011122345677788899999999999999998764
No 205
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.95 E-value=9.5e-10 Score=114.40 Aligned_cols=110 Identities=21% Similarity=0.226 Sum_probs=66.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------cc--CCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TS--DPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~--~~~~~~~~ 758 (818)
|+||++++++++|++|||+++.............|+..|+|||. ..+...+.|.. .. +......+
T Consensus 138 p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 217 (265)
T cd08217 138 PANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ 217 (265)
T ss_pred HHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH
Confidence 88999999999999999999987554433345578999999992 11111222321 11 11110111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
+.+....+.....+......+.+++..|++.+|++||+|.+|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 218 LASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 111111111101122334567788889999999999999999864
No 206
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.95 E-value=2.6e-10 Score=120.63 Aligned_cols=102 Identities=21% Similarity=0.280 Sum_probs=63.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC-----------Cc--cccccccceeCCC---CCCcc-hHHHHh---------
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-----------NR--TLIAGTYRYIAPA---KHPQE-ILSLFS--------- 747 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-----------~~--~~~~gt~gy~aPE---~~~~~-~l~~~~--------- 747 (818)
|.|||||+||+.||+|||-||.+..... .. ...+||..|++|| ..+.+ .-+-|+
T Consensus 202 PENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQml 281 (604)
T KOG0592|consen 202 PENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQML 281 (604)
T ss_pred hhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHh
Confidence 9999999999999999999999853211 11 4589999999999 33332 222343
Q ss_pred cccCCC--cc----ccceec--ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 748 STSDPH--IT----LTYILD--QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 748 ~~~~~~--~~----~~~~~d--~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+..+. .+ ...|++ -.+.... ...+.++...-+..||.+|++..|+.+
T Consensus 282 aG~PPFra~NeyliFqkI~~l~y~fp~~f-------p~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 282 AGQPPFRAANEYLIFQKIQALDYEFPEGF-------PEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred cCCCCCccccHHHHHHHHHHhcccCCCCC-------CHHHHHHHHHHHccCccccccHHHHhh
Confidence 222221 11 112222 1222222 233344555677899999999988764
No 207
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.95 E-value=5.6e-10 Score=116.21 Aligned_cols=111 Identities=17% Similarity=0.157 Sum_probs=71.2
Q ss_pred ccccccCCCCcccccccccceeccCCCC-----CccccccccceeCCCC------CCcc--hHHHHhccc---------C
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-----NRTLIAGTYRYIAPAK------HPQE--ILSLFSSTS---------D 751 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-----~~~~~~gt~gy~aPE~------~~~~--~l~~~~~~~---------~ 751 (818)
|+|+||++++++||+|||.+-....+.. .-...+||+.+||||- ..+. .++.|+... .
T Consensus 238 PsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~ 317 (576)
T KOG0585|consen 238 PSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQL 317 (576)
T ss_pred hhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccC
Confidence 9999999999999999999987743311 1245789999999991 1111 566675321 1
Q ss_pred C--Cccccceecc----cCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 752 P--HITLTYILDQ----RISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 752 ~--~~~~~~~~d~----~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
+ .....+..|+ .+..+. ..+.-...-.+....++.||+.|-+..+|....--.
T Consensus 318 PF~~~~~~~l~~KIvn~pL~fP~---~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 318 PFFDDFELELFDKIVNDPLEFPE---NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred CcccchHHHHHHHHhcCcccCCC---cccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 1 2222333333 333222 222334445566788999999999999987665433
No 208
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.95 E-value=7e-10 Score=118.35 Aligned_cols=115 Identities=14% Similarity=0.202 Sum_probs=68.6
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHhc----------ccCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFSS----------TSDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~~~--~~~ 755 (818)
|+||++++++++|++|||+++....... ..+...++..|+||| ..++...+.|+. ...+ ...
T Consensus 168 p~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 168 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred HHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 8999999999999999999986643211 122333557899999 212222222321 1111 111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..++.+........+.+......+.+++..|++.+|++||+|.+|++.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 248 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 11111110001000112233456677888999999999999999999999873
No 209
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.94 E-value=1.4e-09 Score=114.17 Aligned_cols=110 Identities=23% Similarity=0.236 Sum_probs=65.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------ccCCCccc--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDPHITL--TY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~~~~~--~~ 758 (818)
++||+++.++.+|++|||+++.+...........|+.+|+|||. .+....+.|+. ...+.... ..
T Consensus 129 p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 208 (277)
T cd06641 129 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK 208 (277)
T ss_pred HHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH
Confidence 89999999999999999999876543323334568999999992 11112222321 11111100 00
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
....................+.+++.+|++.+|.+||+|.++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 209 VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000000112234456778889999999999999999974
No 210
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.94 E-value=8.3e-10 Score=116.80 Aligned_cols=109 Identities=21% Similarity=0.193 Sum_probs=64.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----C-----CcchHHHHhc---------ccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----H-----PQEILSLFSS---------TSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~-----~~~~l~~~~~---------~~~~~~~ 755 (818)
|+||++++++.+||+|||+++............+|+..|+|||. . .+...+.|+. ...+...
T Consensus 156 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~ 235 (291)
T cd06639 156 GNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFD 235 (291)
T ss_pred HHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCC
Confidence 89999999999999999999876543322334578999999992 1 1112223321 1111110
Q ss_pred c--cceecccCCCcC--ccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 756 L--TYILDQRISPPK--KQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 756 ~--~~~~d~~l~~~~--~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
. .+.+........ ...+.+....+.+++..|++.+|++||+|.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 236 MHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 000110000000 0011122345677889999999999999999875
No 211
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.94 E-value=8.8e-11 Score=121.21 Aligned_cols=42 Identities=29% Similarity=0.385 Sum_probs=36.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|.|||||+.++++|||.|||-.+........+ +||.||||||
T Consensus 315 PeNILLDd~GhvRISDLGLAvei~~g~~~~~r-vGT~GYMAPE 356 (591)
T KOG0986|consen 315 PENILLDDHGHVRISDLGLAVEIPEGKPIRGR-VGTVGYMAPE 356 (591)
T ss_pred hhheeeccCCCeEeeccceEEecCCCCccccc-cCcccccCHH
Confidence 89999999999999999999988666544443 8999999999
No 212
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.94 E-value=5.7e-10 Score=106.27 Aligned_cols=103 Identities=19% Similarity=0.179 Sum_probs=66.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhccc-----------CCCcc---
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSSTS-----------DPHIT--- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~~-----------~~~~~--- 755 (818)
|.|+|++.+++.||||||.+-.-. .....+.+||+-|.||| .++.| .++.|.-+. ++...
T Consensus 152 penlLlg~~~~lkiAdfGwsV~~p--~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e 229 (281)
T KOG0580|consen 152 PENLLLGSAGELKIADFGWSVHAP--SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE 229 (281)
T ss_pred HHHhccCCCCCeeccCCCceeecC--CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence 899999999999999999986543 33345689999999999 22233 566664221 11111
Q ss_pred -ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 756 -LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 756 -~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
..++..-++. . +..-...+.+++..|+..+|.+|.+..||++.
T Consensus 230 tYkrI~k~~~~--~---p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 230 TYKRIRKVDLK--F---PSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHHHHHcccc--C---CcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1111111111 1 11122345567789999999999999999863
No 213
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.94 E-value=1.6e-09 Score=114.15 Aligned_cols=43 Identities=28% Similarity=0.322 Sum_probs=34.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+|++|||+++.........+...++..|+|||
T Consensus 127 p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE 169 (283)
T cd07835 127 PQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 169 (283)
T ss_pred HHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCc
Confidence 8999999999999999999986643332233446789999999
No 214
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.94 E-value=8.1e-10 Score=116.89 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=62.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHh---------cccCCC--ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFS---------STSDPH--ITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~---------~~~~~~--~~~~~ 758 (818)
|+||++|+++++|++|||+++.............|+..|+|||. ..+..-+.|+ ....+. ....+
T Consensus 146 p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~ 225 (292)
T cd06658 146 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ 225 (292)
T ss_pred HHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 89999999999999999999866443333344578999999991 1111122232 111111 00000
Q ss_pred e---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 I---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
. +...+.... .........+..+...|++.+|++||++.++++.
T Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 226 AMRRIRDNLPPRV-KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHhcCCCcc-ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 000111110 0001112234556678999999999999999864
No 215
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.94 E-value=9.9e-10 Score=115.46 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=68.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCC--ccccccccceeCCCC----CCcchHHHHhc----------cc--CCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN--RTLIAGTYRYIAPAK----HPQEILSLFSS----------TS--DPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~--~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~--~~~~~ 755 (818)
|+||++++++.+|++|||+++.+...... .....++..|+|||. .+....+.|.. .. +....
T Consensus 137 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 216 (279)
T cd05057 137 ARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP 216 (279)
T ss_pred cceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC
Confidence 89999999999999999999977543221 122334678999992 11111222221 11 11111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..++.+........+.+..+...+.+++..|+..+|.+||++.++++.|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 217 AVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111111111111011222334567788899999999999999999999987
No 216
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.94 E-value=1.5e-09 Score=115.91 Aligned_cols=43 Identities=26% Similarity=0.300 Sum_probs=35.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++++||+|||+++.............||..|+|||
T Consensus 132 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE 174 (309)
T cd07872 132 PQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPD 174 (309)
T ss_pred HHHEEECCCCCEEECccccceecCCCccccccccccccccCCH
Confidence 8999999999999999999987644333334456899999999
No 217
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.94 E-value=4e-10 Score=121.05 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=59.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhc---------ccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSS---------TSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~---------~~~~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++.............||.+|+||| ..+.+ ..+.|+. ...+ .....+
T Consensus 129 p~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~ 208 (323)
T cd05615 129 LDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 208 (323)
T ss_pred HHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence 8999999999999999999986543333344567999999999 22221 2223321 1111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCCh
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTM 797 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m 797 (818)
++...+.... ..+......+.++...|++.+|.+|++.
T Consensus 209 ~~~~i~~~~~-~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 209 LFQSIMEHNV-SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHHhCCC-CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1111111110 0111123345677889999999999985
No 218
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=98.94 E-value=3.4e-10 Score=114.99 Aligned_cols=107 Identities=18% Similarity=0.210 Sum_probs=68.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc--hHHHHhc---------ccCCC-c-ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE--ILSLFSS---------TSDPH-I-TLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~--~l~~~~~---------~~~~~-~-~~~ 757 (818)
-.|||||.+.++|||||||+-++..+. .-++.+|++-|..|| ..|+. .++.|+- ..++. + .-.
T Consensus 181 LENILLD~N~NiKIADFGLSNly~~~k-fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk 259 (668)
T KOG0611|consen 181 LENILLDQNNNIKIADFGLSNLYADKK-FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK 259 (668)
T ss_pred hhheeecCCCCeeeeccchhhhhcccc-HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH
Confidence 579999999999999999998875443 345689999999999 33433 3445542 22221 1 111
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.++.+.-.+.+. ..+.+.....++.+.+..+|++|-|+.+|...
T Consensus 260 ~lvrQIs~GaYr--EP~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 260 RLVRQISRGAYR--EPETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred HHHHHhhccccc--CCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 112221122211 11223344556778899999999999998754
No 219
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.94 E-value=6.4e-10 Score=119.78 Aligned_cols=43 Identities=28% Similarity=0.448 Sum_probs=35.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++|.++++||+|||+++.............||.+|+|||
T Consensus 124 p~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE 166 (329)
T cd05618 124 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 166 (329)
T ss_pred HHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHH
Confidence 8999999999999999999986433333344578999999999
No 220
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.93 E-value=1.1e-09 Score=128.00 Aligned_cols=114 Identities=23% Similarity=0.230 Sum_probs=66.0
Q ss_pred ccccccCCCCcccccccccceeccCCC------------------CCccccccccceeCCC---CCC-cchHHHHhcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS------------------SNRTLIAGTYRYIAPA---KHP-QEILSLFSST-- 749 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~------------------~~~~~~~gt~gy~aPE---~~~-~~~l~~~~~~-- 749 (818)
|+|||+|.++.+||+|||+++...... ......+||++|+||| ..+ +...+.|+.+
T Consensus 141 PeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVI 220 (932)
T PRK13184 141 PDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVI 220 (932)
T ss_pred hheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHH
Confidence 899999999999999999998762110 0012357999999999 122 2223334311
Q ss_pred -------cCC--Cccccceecc-cCCCcCc-cchHHHHHHHHHHHHhccCCCCCCCC-ChHHHHHHHccC
Q 003465 750 -------SDP--HITLTYILDQ-RISPPKK-QKIVQDIALASIVALACLQSKPKSVP-TMQRVSQEFLKF 807 (818)
Q Consensus 750 -------~~~--~~~~~~~~d~-~l~~~~~-~~~~~~~~~~~~la~~C~~~~p~~RP-~m~~V~~~L~~~ 807 (818)
..+ .....++... .+..... ....+....+.+++.+|++.+|++|| ++.++.+.|+..
T Consensus 221 LyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 221 LYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred HHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111 1111111111 1111000 00112234567788899999999995 577788877765
No 221
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.93 E-value=2.6e-09 Score=112.15 Aligned_cols=109 Identities=23% Similarity=0.257 Sum_probs=65.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CC-cchHHHHhc---------ccCCC--cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HP-QEILSLFSS---------TSDPH--ITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~-~~~l~~~~~---------~~~~~--~~~~ 757 (818)
|+||++++++++|++|||+++.............|+..|+|||. .+ ....+.|+. ...+. ....
T Consensus 129 p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~ 208 (277)
T cd06917 129 AANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF 208 (277)
T ss_pred HHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh
Confidence 89999999999999999999887554433445679999999991 11 111222321 11111 1000
Q ss_pred ceecccCCCcCccchH-HHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YILDQRISPPKKQKIV-QDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~-~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
..+............. .....+.+++..|++.+|++||++.++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 209 RAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred hhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0000000000000011 13446777888999999999999999975
No 222
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.93 E-value=6.3e-10 Score=119.31 Aligned_cols=108 Identities=18% Similarity=0.191 Sum_probs=63.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCc-chHHHHhcc---------cCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQ-EILSLFSST---------SDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~-~~l~~~~~~---------~~~--~~~~~~ 758 (818)
|+|||+++++.+||+|||+++............+||..|+||| ..+. ...+.|+.. ..+ .....+
T Consensus 124 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~ 203 (318)
T cd05570 124 LDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE 203 (318)
T ss_pred HHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH
Confidence 8999999999999999999986433333344567999999999 1121 122333311 111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCCh-----HHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTM-----QRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m-----~~V~~ 802 (818)
+......... ..+......+.+++..|++.+|++||++ .++++
T Consensus 204 ~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 204 LFQSILEDEV-RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHcCCC-CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1110000000 0011123445677889999999999999 77764
No 223
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.93 E-value=4.9e-10 Score=118.56 Aligned_cols=105 Identities=18% Similarity=0.141 Sum_probs=60.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CC-CcchHHHHhcc---------cCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KH-PQEILSLFSST---------SDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~-~~~~l~~~~~~---------~~~--~~~~~~ 758 (818)
|+|||+++++.+||+|||+++..... ....+||+.|+||| .. .....+.|+.+ ..+ .....+
T Consensus 129 p~NIli~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~ 205 (291)
T cd05612 129 PENILLDKEGHIKLTDFGFAKKLRDR---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG 205 (291)
T ss_pred HHHeEECCCCCEEEEecCcchhccCC---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 89999999999999999999876432 23457999999999 11 11123334321 111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCC-----hHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPT-----MQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~-----m~~V~~ 802 (818)
+......... ..+...-..+.++...|++.||.+||+ +.++.+
T Consensus 206 ~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 206 IYEKILAGKL-EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHHHHhCCc-CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 1111111110 001111234556778999999999995 666654
No 224
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.93 E-value=1.3e-09 Score=112.82 Aligned_cols=111 Identities=17% Similarity=0.176 Sum_probs=67.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhcc-----------cCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSST-----------SDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~~-----------~~~~~~~~~ 758 (818)
|+||++++++.+||+|||+++.............|+..|+|||. .+....+.|... .+......+
T Consensus 129 p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08221 129 TLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN 208 (256)
T ss_pred hHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 89999999999999999999877554433445679999999992 111111222211 111111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEF 804 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L 804 (818)
.+.....+...+........+.+++..|++.+|++||++.++++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 209 LVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1111111111111122234566778899999999999999998753
No 225
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.93 E-value=3.4e-10 Score=122.01 Aligned_cols=40 Identities=28% Similarity=0.448 Sum_probs=34.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++..... .....||+.|+|||
T Consensus 146 p~NIll~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE 185 (329)
T PTZ00263 146 PENLLLDNKGHVKVTDFGFAKKVPDR---TFTLCGTPEYLAPE 185 (329)
T ss_pred HHHEEECCCCCEEEeeccCceEcCCC---cceecCChhhcCHH
Confidence 89999999999999999999876432 22457999999999
No 226
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.93 E-value=1.6e-09 Score=114.13 Aligned_cols=43 Identities=26% Similarity=0.299 Sum_probs=35.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||+++.++++||+|||+++.............++..|+|||
T Consensus 127 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 169 (284)
T cd07839 127 PQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPD 169 (284)
T ss_pred HHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChH
Confidence 8999999999999999999987654433334456889999999
No 227
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.93 E-value=4.1e-10 Score=120.30 Aligned_cols=104 Identities=23% Similarity=0.345 Sum_probs=64.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC--------CCCcc-hHHHHhccc---------CCCc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA--------KHPQE-ILSLFSSTS---------DPHI- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE--------~~~~~-~l~~~~~~~---------~~~~- 754 (818)
+.|||+.-++.+|+||||++.-....-...-...||+.||||| -.|+| ..+.|..+. .+..
T Consensus 158 AGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe 237 (1187)
T KOG0579|consen 158 AGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE 237 (1187)
T ss_pred ccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc
Confidence 7899999999999999999754322212223567999999999 56777 344454321 1111
Q ss_pred -cccceec-------ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 755 -TLTYILD-------QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 755 -~~~~~~d-------~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+.+.++- |.+..+. .+... +.++-..|+..+|..||+.+++++
T Consensus 238 lnpMRVllKiaKSePPTLlqPS--~Ws~~---F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 238 LNPMRVLLKIAKSEPPTLLQPS--HWSRS---FSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cchHHHHHHHhhcCCCcccCcc--hhhhH---HHHHHHHHHhcCCccCCCHHHHhh
Confidence 1111111 1221111 13333 444555999999999999999764
No 228
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.92 E-value=6.2e-10 Score=119.77 Aligned_cols=108 Identities=15% Similarity=0.187 Sum_probs=62.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCC-cchHHHHhcccC---------C--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHP-QEILSLFSSTSD---------P--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~-~~~l~~~~~~~~---------~--~~~~~~ 758 (818)
|+|||+|+++.+||+|||+++.............||++|+||| ... ....+.|+.... + .....+
T Consensus 124 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~ 203 (325)
T cd05594 124 LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 203 (325)
T ss_pred CCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH
Confidence 8999999999999999999986543333344567999999999 111 112334432211 0 000000
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~ 802 (818)
+......... ..+......+.++...|++.+|++|| ++.++++
T Consensus 204 ~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 204 LFELILMEEI-RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHhcCCC-CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 0000000000 00111123355677799999999996 8888864
No 229
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.92 E-value=6.9e-10 Score=118.86 Aligned_cols=43 Identities=23% Similarity=0.430 Sum_probs=35.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++.........+..+||.+|+|||
T Consensus 124 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 166 (316)
T cd05620 124 LDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPE 166 (316)
T ss_pred HHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHH
Confidence 8999999999999999999986433333345678999999999
No 230
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.92 E-value=1.2e-09 Score=116.25 Aligned_cols=113 Identities=16% Similarity=0.198 Sum_probs=65.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---CC-cchHHHHhcc----------cCC--Ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---HP-QEILSLFSST----------SDP--HITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~~-~~~l~~~~~~----------~~~--~~~~~ 757 (818)
|+|||+|+++.+||+|||+++...... ......++..|+|||. .+ +...+.|+.. ..+ .....
T Consensus 152 p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 230 (303)
T cd05088 152 ARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 230 (303)
T ss_pred hheEEecCCCcEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH
Confidence 899999999999999999997432111 1222345678999991 11 1112223211 111 11111
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
+..+........+.+......+.+++..|++.+|++||++.+++++|+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 231 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111000011122234567888999999999999999999999887
No 231
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.91 E-value=1.6e-09 Score=112.60 Aligned_cols=109 Identities=23% Similarity=0.324 Sum_probs=64.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC-------CCcchHHHHhcc---------cCCCccc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK-------HPQEILSLFSST---------SDPHITL- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~-------~~~~~l~~~~~~---------~~~~~~~- 756 (818)
|+||++|+++.+||+|||+++.............|+..|+|||. ..+...+.|... ..+....
T Consensus 129 p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 129 GANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred hhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 89999999999999999999876543323345678999999992 121122333211 1111000
Q ss_pred --cce---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 757 --TYI---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 757 --~~~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
... ....+..............+.+++.+|++.+|.+||++.+|+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 209 PMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000011000111222345678888999999999999999875
No 232
>PTZ00284 protein kinase; Provisional
Probab=98.91 E-value=1.1e-09 Score=124.08 Aligned_cols=40 Identities=25% Similarity=0.268 Sum_probs=31.7
Q ss_pred ccccccCCCC----------------cccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEF----------------EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~----------------~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++ .+||+|||+++... ...+..+||.+|+|||
T Consensus 260 P~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE 315 (467)
T PTZ00284 260 PENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPE 315 (467)
T ss_pred HHHEEEecCCcccccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcH
Confidence 8999998765 49999999886432 2234578999999999
No 233
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.91 E-value=1.3e-09 Score=115.02 Aligned_cols=43 Identities=30% Similarity=0.301 Sum_probs=35.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
++||++|+++.+||+|||+++....... ......|+.+|+|||
T Consensus 128 ~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE 171 (288)
T cd07833 128 PENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPE 171 (288)
T ss_pred HHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCc
Confidence 7899999999999999999988754432 334467889999999
No 234
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.91 E-value=1.9e-09 Score=109.60 Aligned_cols=43 Identities=28% Similarity=0.281 Sum_probs=37.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++..|+||||+||...-.....+..++|.-|-|||
T Consensus 148 PQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPE 190 (323)
T KOG0594|consen 148 PQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPE 190 (323)
T ss_pred cceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHH
Confidence 9999999999999999999998765555456677999999999
No 235
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.91 E-value=1.8e-09 Score=109.56 Aligned_cols=42 Identities=26% Similarity=0.354 Sum_probs=34.8
Q ss_pred ccccccCCC-CcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSE-FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~-~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|+|+|.+ +..||||||-||.+..++...+-+ -|..|-|||
T Consensus 153 PqNlLvD~~tg~LKicDFGSAK~L~~~epniSYi-cSRyYRaPE 195 (364)
T KOG0658|consen 153 PQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYI-CSRYYRAPE 195 (364)
T ss_pred hheEEEcCCCCeEEeccCCcceeeccCCCceeEE-EeccccCHH
Confidence 999999988 999999999999987665544433 366899999
No 236
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.91 E-value=2.1e-09 Score=113.23 Aligned_cols=110 Identities=18% Similarity=0.157 Sum_probs=63.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC---------CcchHHHHhc---------ccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH---------PQEILSLFSS---------TSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~---------~~~~l~~~~~---------~~~~~~~ 755 (818)
|+||+++.++++||+|||+++.............|+..|+|||.. +....+.|+. ...+...
T Consensus 131 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 210 (282)
T cd06643 131 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHE 210 (282)
T ss_pred cccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccc
Confidence 899999999999999999998654332233446799999999921 0011222321 1111110
Q ss_pred --ccceecccCCC--cCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 756 --LTYILDQRISP--PKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 756 --~~~~~d~~l~~--~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
..+.+...... .....+......+.+++..|++.+|.+||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 211 LNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred cCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000 0000111223456678889999999999999998753
No 237
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.91 E-value=1.6e-09 Score=125.29 Aligned_cols=113 Identities=20% Similarity=0.258 Sum_probs=72.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCc-cccccc--cceeCCC----CCCcchHHHHhc------------ccCCCc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNR-TLIAGT--YRYIAPA----KHPQEILSLFSS------------TSDPHI 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~-~~~~gt--~gy~aPE----~~~~~~l~~~~~------------~~~~~~ 754 (818)
++|||+.++..+||||||+||......... ....|+ +.||||| ...+..-+.|+. ..+++.
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 689999999999999999999765443222 223333 4599999 111112233432 122221
Q ss_pred c-ccceecccC-CCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 755 T-LTYILDQRI-SPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 755 ~-~~~~~d~~l-~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
. ..+++. .+ .+...+.+..|...+..++..||+.+|++||++.+.++.++..
T Consensus 526 ~~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 526 PPTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CcHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 1 112222 22 2222244566777888999999999999999999999998873
No 238
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.91 E-value=2.1e-09 Score=114.10 Aligned_cols=113 Identities=14% Similarity=0.189 Sum_probs=66.3
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC---CCC-cchHHHHhc-----------ccCCC--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA---KHP-QEILSLFSS-----------TSDPH--I 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE---~~~-~~~l~~~~~-----------~~~~~--~ 754 (818)
|+|||+++++.+|++|||+++.+..... ......++..|+||| ..+ +...+.|+. ...+. .
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 8999999999999999999987643321 122334567899999 111 111222221 11111 1
Q ss_pred cccceec-------ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 755 TLTYILD-------QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 755 ~~~~~~d-------~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
...+++. ........+.+..+...+.+++.+|++.+|++||+|.+|++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1111111 000000001122334567789999999999999999999999863
No 239
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.91 E-value=2.2e-09 Score=116.44 Aligned_cols=40 Identities=30% Similarity=0.335 Sum_probs=33.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+|++|||+++..... .....||..|+|||
T Consensus 145 p~NIll~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE 184 (342)
T cd07879 145 PGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPE 184 (342)
T ss_pred HHHEEECCCCCEEEeeCCCCcCCCCC---CCCceeeecccChh
Confidence 89999999999999999999865322 23456889999999
No 240
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.91 E-value=1.6e-09 Score=117.04 Aligned_cols=115 Identities=15% Similarity=0.201 Sum_probs=69.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC---CC-CcchHHHHhc----------c--cCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA---KH-PQEILSLFSS----------T--SDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE---~~-~~~~l~~~~~----------~--~~~~~~ 755 (818)
|+|||+++++++||+|||+++....... ......++..|+||| .. +....+.|.. . .+....
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999987643321 123344567899999 11 1111222221 1 111111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..++.+........+.+......+.+++..|++.+|++||+|.|+++.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 242 VEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 11111111111110112233456778899999999999999999999999885
No 241
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.91 E-value=4.2e-10 Score=121.08 Aligned_cols=109 Identities=20% Similarity=0.220 Sum_probs=62.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc---------cCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST---------SDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~---------~~~--~~~~~~ 758 (818)
|+|||++.++.+||+|||+++............+||++|+||| ..+.+ ..+.|+.. ..+ .....+
T Consensus 124 p~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 203 (325)
T cd05602 124 PENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203 (325)
T ss_pred HHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH
Confidence 8999999999999999999986543333445678999999999 11111 12233211 111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
..+....... .........+.++...|++.+|.+||++.+.+.+
T Consensus 204 ~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 204 MYDNILNKPL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHhCCc-CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 1111111100 0011112334556679999999999998754433
No 242
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.91 E-value=1.4e-09 Score=115.33 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=66.6
Q ss_pred ccccccCCCCcccccccccceeccCCC-------CCccccccccceeCCC----CCCcchHHHHh---------cccCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS-------SNRTLIAGTYRYIAPA----KHPQEILSLFS---------STSDPH 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~-------~~~~~~~gt~gy~aPE----~~~~~~l~~~~---------~~~~~~ 753 (818)
|+|||+|.++.+||+|||+|+.+.... .......||+.|+||| ...+...+.|+ ....+.
T Consensus 154 p~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~ 233 (294)
T PHA02882 154 PENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPW 233 (294)
T ss_pred HHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 899999999999999999998764321 1123457999999999 11111222232 222221
Q ss_pred ccc---c--------ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 754 ITL---T--------YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 754 ~~~---~--------~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
... . +++ .++.... .....+...+.+++..|++.+|++||++.++.+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 234 KGFGHNGNLIHAAKCDFI-KRLHEGK-IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred CccccchHHHHHhHHHHH-HHhhhhh-hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 111 0 011 1111100 001123455667888999999999999999998763
No 243
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.90 E-value=1.4e-09 Score=116.51 Aligned_cols=115 Identities=15% Similarity=0.181 Sum_probs=67.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC----CCCcchHHHHhc----------cc--CCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA----KHPQEILSLFSS----------TS--DPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE----~~~~~~l~~~~~----------~~--~~~~~ 755 (818)
|+|||+++++++|++|||+++....... ......++..|+||| +..+...+.|+. .. +....
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 162 ARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred ceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999987643221 122233556899999 111111122221 11 11111
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..++.+........+.+..+...+.+++.+|++.+|++||++.++++.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 242 VEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11111110111000112223445667888999999999999999999999873
No 244
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.90 E-value=1.9e-09 Score=118.09 Aligned_cols=42 Identities=29% Similarity=0.271 Sum_probs=34.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+++..... ...+...||.+|+|||
T Consensus 154 p~NIll~~~~~~kL~DfG~a~~~~~~-~~~~~~~~t~~y~aPE 195 (364)
T cd07875 154 PSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPE 195 (364)
T ss_pred HHHEEECCCCcEEEEeCCCccccCCC-CcccCCcccCCcCCHH
Confidence 89999999999999999999875432 2234457999999999
No 245
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.90 E-value=1.5e-09 Score=113.40 Aligned_cols=113 Identities=16% Similarity=0.189 Sum_probs=66.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhcc----------cCC--Ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSST----------SDP--HITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~~----------~~~--~~~~~ 757 (818)
|+||++++++.+|++|||+++..... ........+.+|+|||. ......+.|+.. ..+ .....
T Consensus 140 p~nili~~~~~~kl~dfgl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~ 218 (270)
T cd05047 140 ARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 218 (270)
T ss_pred cceEEEcCCCeEEECCCCCccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH
Confidence 89999999999999999998743211 11122334678999991 111122333311 111 11111
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
+...........+.+......+.+++..|++.+|.+||++.+++++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 219 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 11111100000011222334577899999999999999999999999875
No 246
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.90 E-value=3e-09 Score=112.58 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=63.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC--------Ccc-hHHHHhcc---------cCCCc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH--------PQE-ILSLFSST---------SDPHI- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~--------~~~-~l~~~~~~---------~~~~~- 754 (818)
|+||+++.++.+||+|||+++.............|+..|+|||.. +.+ ..+.|... ..+..
T Consensus 138 p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 138 AGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred cceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 899999999999999999987653332223445688999999921 111 22333211 11111
Q ss_pred -cccceecccCCCcC--ccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 755 -TLTYILDQRISPPK--KQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 755 -~~~~~~d~~l~~~~--~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
...+.+........ ...+......+.+++..|++.+|++||++.+|++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 218 LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000000000000 0011122345677888999999999999999975
No 247
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.90 E-value=1.2e-09 Score=115.05 Aligned_cols=112 Identities=22% Similarity=0.208 Sum_probs=66.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------ccCCCcc-----
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDPHIT----- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~~~~----- 755 (818)
|+||++++++++||+|||+++..... ......|+..|+|||. .+....+.|.. ...+...
T Consensus 132 p~nil~~~~~~~~l~d~gl~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~ 209 (284)
T cd06620 132 PSNILVNSRGQIKLCDFGVSGELINS--IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDD 209 (284)
T ss_pred HHHEEECCCCcEEEccCCcccchhhh--ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhh
Confidence 78999999999999999998765322 2234679999999992 11111222221 1111100
Q ss_pred --------ccceecccCCCcCccc-hHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 --------LTYILDQRISPPKKQK-IVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 --------~~~~~d~~l~~~~~~~-~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..+.+...+....... ..+....+.+++..|++.+|++||+|.||+++.--+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 210 DGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred hhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 0011111111110000 112334577788899999999999999999875433
No 248
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.90 E-value=1.6e-09 Score=113.98 Aligned_cols=107 Identities=20% Similarity=0.231 Sum_probs=63.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC--------Ccc-hHHHHhc---------ccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH--------PQE-ILSLFSS---------TSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~--------~~~-~l~~~~~---------~~~~~~~ 755 (818)
++||++++++.+||+|||+++.............|+..|+|||.. ..+ ..+.|.. ...+...
T Consensus 149 ~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~ 228 (282)
T cd06636 149 GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCD 228 (282)
T ss_pred HHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccc
Confidence 789999999999999999998664332233456799999999921 111 1223321 1111100
Q ss_pred ---cccee--cccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 756 ---LTYIL--DQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 756 ---~~~~~--d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
...+. ........ ........+.+++..|++.+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 229 MHPMRALFLIPRNPPPKL--KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred cCHHhhhhhHhhCCCCCC--cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00000 00000000 11123346777888999999999999999875
No 249
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.90 E-value=2.4e-09 Score=113.31 Aligned_cols=43 Identities=26% Similarity=0.244 Sum_probs=34.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||+++.++++||+|||+++.............++..|+|||
T Consensus 131 p~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE 173 (291)
T cd07870 131 PQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPD 173 (291)
T ss_pred hHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCc
Confidence 8999999999999999999986543332233456789999999
No 250
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.90 E-value=4.4e-10 Score=106.34 Aligned_cols=14 Identities=29% Similarity=0.377 Sum_probs=3.6
Q ss_pred CCCcEEECcCCCCC
Q 003465 149 NNLVELYLSRSNLN 162 (818)
Q Consensus 149 ~~L~~L~Ls~n~l~ 162 (818)
.+|+.|+|++|.++
T Consensus 42 ~~L~~L~Ls~N~I~ 55 (175)
T PF14580_consen 42 DKLEVLDLSNNQIT 55 (175)
T ss_dssp TT--EEE-TTS--S
T ss_pred cCCCEEECCCCCCc
Confidence 33444444444443
No 251
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.90 E-value=6e-10 Score=120.19 Aligned_cols=43 Identities=28% Similarity=0.457 Sum_probs=35.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++............+||.+|+|||
T Consensus 124 p~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE 166 (330)
T cd05586 124 PENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPE 166 (330)
T ss_pred HHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHH
Confidence 8999999999999999999986543333345578999999999
No 252
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.90 E-value=1.9e-10 Score=127.34 Aligned_cols=245 Identities=30% Similarity=0.364 Sum_probs=126.2
Q ss_pred CCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEE
Q 003465 123 ALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTL 202 (818)
Q Consensus 123 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 202 (818)
.+..+..+++..|.+.. +-..+..+.+|+.|++.+|+|.. +...+..+++|++|++++|.|+.. ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 34444555555555542 22334555556666666666552 222245556666666666665543 234455556666
Q ss_pred EcccCcCCccCCccccCCCCCCEEEccCCcCCCCCC-CCCCCCCcceEEEccCCCCCCCCCccccCCCCCcEEEcccccc
Q 003465 203 KLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIA-STIGDLTNLNSLDLSSKQLSGPLPQEIGYLENLVYLSLNVNNL 281 (818)
Q Consensus 203 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 281 (818)
++++|.++.. ..+..+++|+.+++++|++...-+ . ...+.+++.+++.+|.+... ..+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccc
Confidence 6666666532 234445666666666666553322 1 34556666666666665522 2333344444446666655
Q ss_pred CCcCCcccCCCCC--CCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCccccc---
Q 003465 282 TGPIPSTLGRLTS--LSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGP--- 356 (818)
Q Consensus 282 ~~~~~~~l~~l~~--L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~--- 356 (818)
+..-+ +..+.. |+.+++++|.+.. .+..+..+..+..|++.+|++...- .+...+.+..+....|.+...
T Consensus 221 ~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 295 (414)
T KOG0531|consen 221 SKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALSEAI 295 (414)
T ss_pred eeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhccccccc--cccccchHHHhccCcchhcchhhh
Confidence 53211 122222 6666677766652 2234555666677777766665321 133344555555555554421
Q ss_pred CCc-CcCCCCCCCEEeccCCcCCCCC
Q 003465 357 IPL-TIGDLTNLIYLDLSLNQLSGPI 381 (818)
Q Consensus 357 ~~~-~l~~l~~L~~L~Ls~n~l~~~~ 381 (818)
... .....+.++.+.+..|.+....
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 296 SQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred hccccccccccccccccccCcccccc
Confidence 111 1345567777777777665443
No 253
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.90 E-value=2.1e-09 Score=116.61 Aligned_cols=112 Identities=17% Similarity=0.207 Sum_probs=67.3
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhc----------ccCCC--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~--~~ 755 (818)
|+|||+++++++|++|||+++....... ......+++.|+|||. ......+.|.. ...+. ..
T Consensus 207 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 286 (343)
T cd05103 207 ARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 286 (343)
T ss_pred cCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 8999999999999999999987643322 1223456788999991 11111222321 11111 00
Q ss_pred cc----ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 756 LT----YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 756 ~~----~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
.. ..+........ +......+.+++..|++.+|++||+|.||++.|+.+.
T Consensus 287 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 287 IDEEFCRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred ccHHHHHHHhccCCCCC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 00111111111 1112235778899999999999999999999998763
No 254
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.89 E-value=1.1e-09 Score=117.25 Aligned_cols=107 Identities=15% Similarity=0.146 Sum_probs=61.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCc-chHHHHhcc---------cCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQ-EILSLFSST---------SDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~-~~l~~~~~~---------~~~--~~~~~~ 758 (818)
|+|||+++++.+||+|||+++.............||..|+||| ..+. ...+.|+.. ..+ .....+
T Consensus 124 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~ 203 (316)
T cd05619 124 LDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE 203 (316)
T ss_pred HHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH
Confidence 8999999999999999999986433333344567999999999 1221 123334321 111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChH-HHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQ-RVS 801 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~-~V~ 801 (818)
+......... ..+......+.++...|++.+|++||++. ++.
T Consensus 204 ~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 204 LFQSIRMDNP-CYPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHhCCC-CCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1110000000 00111122345677799999999999997 553
No 255
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.89 E-value=6.2e-10 Score=119.57 Aligned_cols=104 Identities=19% Similarity=0.265 Sum_probs=60.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc---------cCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST---------SDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~---------~~~--~~~~~~ 758 (818)
|+||++|.++.+||+|||+++.............||++|+||| ..+.+ ..+.|+.. ..+ .....+
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 203 (321)
T cd05603 124 PENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ 203 (321)
T ss_pred HHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH
Confidence 8999999999999999999986433333345567999999999 12211 22233321 111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQ 798 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~ 798 (818)
+.+..+.... ..+......+.++...|++.+|++||+..
T Consensus 204 ~~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 204 MYDNILHKPL-QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHhcCCC-CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1111111111 11112233466788899999999999754
No 256
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.89 E-value=2.7e-09 Score=112.47 Aligned_cols=43 Identities=30% Similarity=0.393 Sum_probs=35.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||+++.++++||+|||+++.............|+..|+|||
T Consensus 128 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE 170 (286)
T cd07847 128 PENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPE 170 (286)
T ss_pred hhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHH
Confidence 8999999999999999999998754432333456888999999
No 257
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.89 E-value=1.9e-09 Score=117.52 Aligned_cols=42 Identities=26% Similarity=0.310 Sum_probs=34.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++..... .......||++|+|||
T Consensus 185 p~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE 226 (357)
T PHA03209 185 TENIFINDVDQVCIGDLGAAQFPVVA-PAFLGLAGTVETNAPE 226 (357)
T ss_pred HHHEEECCCCCEEEecCccccccccC-cccccccccccccCCe
Confidence 89999999999999999999864322 2234567999999999
No 258
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.89 E-value=1.5e-09 Score=118.30 Aligned_cols=43 Identities=28% Similarity=0.481 Sum_probs=35.1
Q ss_pred ccccccCCCCcccccccccceeccCCC-----------------------------CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS-----------------------------SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~-----------------------------~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+++...... .......||..|+|||
T Consensus 129 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (350)
T cd05573 129 PDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPE 200 (350)
T ss_pred HHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHH
Confidence 899999999999999999998764432 1223467999999999
No 259
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.88 E-value=1.8e-09 Score=118.89 Aligned_cols=43 Identities=28% Similarity=0.299 Sum_probs=34.9
Q ss_pred ccccccCCCCcccccccccceeccCC-CCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD-SSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~-~~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+|+..... .......+||++|+|||
T Consensus 210 P~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE 253 (391)
T PHA03212 210 AENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPE 253 (391)
T ss_pred hHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChh
Confidence 89999999999999999999864322 22234568999999999
No 260
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.88 E-value=1.6e-09 Score=113.84 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=63.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhc---------ccCCCcc-----
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSS---------TSDPHIT----- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~---------~~~~~~~----- 755 (818)
|+||++|+++.+||+|||+++.+...........||++|+||| ..+.+ ..+.|+. ...+...
T Consensus 125 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~ 204 (280)
T cd05608 125 PENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV 204 (280)
T ss_pred HHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch
Confidence 8999999999999999999987755443344567999999999 11111 2223321 1111100
Q ss_pred -ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 003465 756 -LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQ 802 (818)
Q Consensus 756 -~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~ 802 (818)
..++......... ..+......+.+++..|++.+|++|| ++.++.+
T Consensus 205 ~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 205 ENKELKQRILNDSV-TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred hHHHHHHhhcccCC-CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 0011111111111 11122334566788899999999999 5566653
No 261
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.88 E-value=3.5e-09 Score=111.32 Aligned_cols=110 Identities=22% Similarity=0.295 Sum_probs=63.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC--------CCcc-hHHHHhc---------ccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK--------HPQE-ILSLFSS---------TSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~--------~~~~-~l~~~~~---------~~~~~~~ 755 (818)
|+||+++.++.+|++|||++..............|+.+|+|||. .+.+ ..+.|.. ...+...
T Consensus 131 p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~ 210 (280)
T cd06611 131 AGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE 210 (280)
T ss_pred hhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence 89999999999999999998765443333345679999999992 1111 1222321 1111110
Q ss_pred c--cceecccCCCc--CccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 756 L--TYILDQRISPP--KKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 756 ~--~~~~d~~l~~~--~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
. .+.+....... ....+......+.+++..|++.+|++||++.+|++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 211 LNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0 01000000000 000111222356677889999999999999999754
No 262
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.88 E-value=2.7e-09 Score=113.13 Aligned_cols=43 Identities=21% Similarity=0.212 Sum_probs=34.1
Q ss_pred ccccccCC-CCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNS-EFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~-~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++||++|. ++.+|++|||+++.........+...+++.|+|||
T Consensus 138 ~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE 181 (295)
T cd07837 138 PQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPE 181 (295)
T ss_pred hHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChH
Confidence 89999999 89999999999987643322233446788999999
No 263
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.88 E-value=1.7e-09 Score=114.07 Aligned_cols=108 Identities=17% Similarity=0.235 Sum_probs=63.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---CCc-chHHHHhcc---------cCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---HPQ-EILSLFSST---------SDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~~~-~~l~~~~~~---------~~~--~~~~~~ 758 (818)
|+||++++++++|++|||+++....+........|+.+|+|||. .+. ...+.|... ..+ .....+
T Consensus 143 p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~ 222 (285)
T cd06648 143 SDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ 222 (285)
T ss_pred hhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence 89999999999999999998866544333334568999999991 111 112223211 111 100000
Q ss_pred ee---cccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 IL---DQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~~---d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+ ........ .........+.+++..|++.+|++||++.++++
T Consensus 223 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 223 AMKRIRDNLPPKL-KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHhcCCCCC-cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 00 00000000 011112345777888999999999999999885
No 264
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.88 E-value=3.1e-09 Score=112.66 Aligned_cols=43 Identities=26% Similarity=0.293 Sum_probs=33.2
Q ss_pred ccccccCC-CCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNS-EFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~-~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++|+ +..+||+|||+++.........+...|+..|+|||
T Consensus 130 p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE 173 (294)
T PLN00009 130 PQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPE 173 (294)
T ss_pred cceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHH
Confidence 89999985 56789999999987644333334456889999999
No 265
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.88 E-value=1.1e-09 Score=116.29 Aligned_cols=110 Identities=17% Similarity=0.249 Sum_probs=75.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhc-----------ccCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSS-----------TSDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~-----------~~~~~~~~~~ 758 (818)
++||+|..+..+|++|||+||.+..+......++||+.||.|| ..|+. .-+.|.- ..+....+..
T Consensus 134 ~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~ 213 (426)
T KOG0589|consen 134 CANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE 213 (426)
T ss_pred hhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH
Confidence 8999999999999999999999987766677889999999999 33433 2334532 2222233333
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.+.........+.+...-..+-.++-.|++.+|+.||+..+++.+
T Consensus 214 Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 214 LILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 333333322212233334445556669999999999999999876
No 266
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.88 E-value=3.3e-09 Score=112.80 Aligned_cols=43 Identities=26% Similarity=0.294 Sum_probs=34.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++.............++..|+|||
T Consensus 132 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE 174 (301)
T cd07873 132 PQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPD 174 (301)
T ss_pred HHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcH
Confidence 8999999999999999999987644333334456789999999
No 267
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.88 E-value=2.3e-09 Score=113.39 Aligned_cols=108 Identities=15% Similarity=0.189 Sum_probs=63.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhcc---------cCCC--cccc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSST---------SDPH--ITLT- 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~~---------~~~~--~~~~- 757 (818)
++||++|+++++|++|||+++.............|+.+|+|||. .+....+.|... ..+. ....
T Consensus 144 p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~ 223 (292)
T cd06657 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 223 (292)
T ss_pred HHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 89999999999999999998876543322344578999999992 111122233211 1110 0000
Q ss_pred --ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 --YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 --~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
..+...+.... .........+.++...|++.+|.+||++.+|++
T Consensus 224 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 224 AMKMIRDNLPPKL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHhhCCccc-CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 11111111111 001112234556777999999999999999986
No 268
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.88 E-value=2.5e-09 Score=111.26 Aligned_cols=110 Identities=18% Similarity=0.213 Sum_probs=63.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCC---ccccccccceeCCCC----CCcchHHHHh---------cccCCCcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN---RTLIAGTYRYIAPAK----HPQEILSLFS---------STSDPHIT-- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~---~~~~~gt~gy~aPE~----~~~~~l~~~~---------~~~~~~~~-- 755 (818)
|+||++++++.+||+|||+++........ .....|+..|+|||. ......+.|+ ....+...
T Consensus 132 p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 211 (263)
T cd06625 132 GANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE 211 (263)
T ss_pred HHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc
Confidence 89999999999999999999876432211 134568899999991 1111222332 11111100
Q ss_pred -ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 756 -LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 756 -~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
...+............+......+.++...|++.+|.+||++.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 212 AMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred hHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 000000000000001122233456677789999999999999999864
No 269
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.87 E-value=3.2e-09 Score=112.15 Aligned_cols=42 Identities=31% Similarity=0.400 Sum_probs=34.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++...... ..+...||..|+|||
T Consensus 136 p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE 177 (288)
T cd07863 136 PENILVTSGGQVKLADFGLARIYSCQM-ALTPVVVTLWYRAPE 177 (288)
T ss_pred HHHEEECCCCCEEECccCccccccCcc-cCCCccccccccCch
Confidence 899999999999999999998764322 234467899999999
No 270
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.87 E-value=4.5e-09 Score=111.57 Aligned_cols=43 Identities=33% Similarity=0.352 Sum_probs=35.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||+++.++++||+|||+++.............+++.|+|||
T Consensus 130 p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 172 (298)
T cd07841 130 PNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPE 172 (298)
T ss_pred hhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHH
Confidence 8999999999999999999987755433334456788999999
No 271
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.87 E-value=1.3e-09 Score=117.72 Aligned_cols=43 Identities=33% Similarity=0.563 Sum_probs=35.4
Q ss_pred ccccccCCCCcccccccccceeccCCC-CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS-SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~-~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+++...... ......+||.+|+|||
T Consensus 133 p~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE 176 (332)
T cd05614 133 LENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPE 176 (332)
T ss_pred HHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHH
Confidence 899999999999999999998754332 2334568999999999
No 272
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.87 E-value=2.4e-10 Score=126.54 Aligned_cols=246 Identities=30% Similarity=0.311 Sum_probs=116.2
Q ss_pred CCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCcCCCCCCCCCCCCCcceEE
Q 003465 171 HLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNKLNGPIASTIGDLTNLNSL 250 (818)
Q Consensus 171 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 250 (818)
.+..++.++++.|.+.. +-..+..+++|+.|++.+|+|... ...+..+++|++|++++|.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I----------------- 130 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKI----------------- 130 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccc-----------------
Confidence 34455555555555542 122344555555555555555432 11133444444444444444
Q ss_pred EccCCCCCCCCCccccCCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCc-hhhcCCCCCCeeeccCCcC
Q 003465 251 DLSSKQLSGPLPQEIGYLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIP-PTLSHLTRLTTLKLFSNQI 329 (818)
Q Consensus 251 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~-~~l~~l~~L~~L~L~~n~l 329 (818)
+.. ..+..++.|+.|++.+|.++.. ..+..++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+
T Consensus 131 -------~~i--~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i 198 (414)
T KOG0531|consen 131 -------TKL--EGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSI 198 (414)
T ss_pred -------ccc--cchhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCch
Confidence 422 1233344455555555555422 223335555555555555543322 1 34455566666666655
Q ss_pred CCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCC--CCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCc
Q 003465 330 NGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTN--LIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPS 407 (818)
Q Consensus 330 ~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~--L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 407 (818)
... ..+..+..+..+++..|.+...-+ +..+.. |+.+++++|.+... +..+..+..+..|++.+|++... .
T Consensus 199 ~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~-~~~~~~~~~l~~l~~~~n~~~~~--~ 271 (414)
T KOG0531|consen 199 REI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRS-PEGLENLKNLPVLDLSSNRISNL--E 271 (414)
T ss_pred hcc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccccc-cccccccccccccchhhcccccc--c
Confidence 421 122223333444555555542211 111222 56666666666522 23455556666666666666533 2
Q ss_pred cccCCCCCCEEecccCcCccc---CCcc-ccCCCCCCEEECcCCcCCccCC
Q 003465 408 ELMNCFSLQSLILSNNSLTGR---IPSE-IRNLSYLHELDLSLNFISGMTP 454 (818)
Q Consensus 408 ~~~~l~~L~~L~Ls~N~l~~~---~p~~-l~~l~~L~~L~Ls~N~l~~~~p 454 (818)
.+.....+..+....|.+... .... ....+.++.+.+..|++....+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 272 GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred cccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 233445555555666655421 1111 3445666666666666655433
No 273
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.87 E-value=3e-09 Score=115.06 Aligned_cols=43 Identities=30% Similarity=0.427 Sum_probs=34.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC---CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++....... ......||..|+|||
T Consensus 134 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 179 (336)
T cd07849 134 PSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPE 179 (336)
T ss_pred HHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChH
Confidence 8999999999999999999987643221 123457899999999
No 274
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.87 E-value=1.6e-09 Score=102.53 Aligned_cols=105 Identities=28% Similarity=0.320 Sum_probs=23.3
Q ss_pred cceEEEccCCCCCCCCCcccc-CCCCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeec
Q 003465 246 NLNSLDLSSKQLSGPLPQEIG-YLENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKL 324 (818)
Q Consensus 246 ~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L 324 (818)
++++|+|++|.|+.. +.++ .+.+|+.|++++|.++.. +.+..++.|+.|++++|.++...+.....+++|++|++
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 344444444444421 2232 244455555555554422 12444455555555555554322211123455555555
Q ss_pred cCCcCCCCc-CccccCCCCCCEEEcCCCccc
Q 003465 325 FSNQINGSI-PLGIGNLENLERVDMSSNKLE 354 (818)
Q Consensus 325 ~~n~l~~~~-~~~l~~l~~L~~L~Ls~n~l~ 354 (818)
++|++...- -..+..+++|+.|++.+|.+.
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 555554211 122344555555555555554
No 275
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.86 E-value=3.7e-09 Score=111.85 Aligned_cols=43 Identities=26% Similarity=0.283 Sum_probs=33.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++++|++|||+++.............++..|+|||
T Consensus 131 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE 173 (291)
T cd07844 131 PQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPD 173 (291)
T ss_pred HHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcH
Confidence 8999999999999999999986533222223345788999999
No 276
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=3.2e-09 Score=107.61 Aligned_cols=55 Identities=27% Similarity=0.372 Sum_probs=42.3
Q ss_pred ccccccCCCCcccccccccceeccCC--CCCccccccccceeCCC-----CCCcchHHHHhc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD--SSNRTLIAGTYRYIAPA-----KHPQEILSLFSS 748 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~--~~~~~~~~gt~gy~aPE-----~~~~~~l~~~~~ 748 (818)
|+|+|++++...||+||||||..... ...+|.-+-|..|-||| ..-+..++.|+.
T Consensus 153 PsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv 214 (359)
T KOG0660|consen 153 PSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSV 214 (359)
T ss_pred hhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhh
Confidence 89999999999999999999988543 22356677899999999 222335666753
No 277
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.86 E-value=4.4e-09 Score=112.25 Aligned_cols=106 Identities=18% Similarity=0.225 Sum_probs=62.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC------CC-cchHHHHhcc---------cCCCccc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK------HP-QEILSLFSST---------SDPHITL- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~------~~-~~~l~~~~~~---------~~~~~~~- 756 (818)
|+||++++++++|++|||+++..... ....|+.+|+|||. .. ....+.|..+ ..+....
T Consensus 143 p~nIl~~~~~~~kL~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~ 218 (307)
T cd06607 143 AGNILLTEPGTVKLADFGSASLVSPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (307)
T ss_pred cccEEECCCCCEEEeecCcceecCCC----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence 89999999999999999999865322 24568899999992 11 1122223211 1110000
Q ss_pred -cce-ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 757 -TYI-LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 757 -~~~-~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
... ...................+.++...|++.+|++||+|.+|+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 219 AMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 00000000000112234456778889999999999999999864
No 278
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.86 E-value=2.6e-09 Score=117.66 Aligned_cols=114 Identities=18% Similarity=0.217 Sum_probs=69.1
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHhc----------ccCCCcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFSS----------TSDPHIT-- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~~----------~~~~~~~-- 755 (818)
|+|||+++++.+||+|||+++....... ......|+..|+|||. ..+...+.|+. ...+...
T Consensus 265 p~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 265 ARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred hHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 7899999999999999999987644322 1233457789999991 11112222321 1111100
Q ss_pred ccceecccCC-CcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LTYILDQRIS-PPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~~~~d~~l~-~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
..+.+-..+. +.....+......+.+++..|++.+|++||+|.+|+++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 345 VDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred hhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 0000000000 000011223445678899999999999999999999999875
No 279
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.86 E-value=1.6e-09 Score=116.76 Aligned_cols=43 Identities=26% Similarity=0.441 Sum_probs=35.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+||+|||+++............+||.+|+|||
T Consensus 124 p~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 166 (329)
T cd05588 124 LDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPE 166 (329)
T ss_pred HHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHH
Confidence 8999999999999999999985433333344578999999999
No 280
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.86 E-value=2.8e-09 Score=115.00 Aligned_cols=43 Identities=30% Similarity=0.419 Sum_probs=35.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++.+...... .....||+.|+|||
T Consensus 130 p~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE 173 (330)
T cd05601 130 PENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPE 173 (330)
T ss_pred hHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHH
Confidence 89999999999999999999877544322 23457999999999
No 281
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.86 E-value=8.6e-10 Score=118.32 Aligned_cols=105 Identities=16% Similarity=0.113 Sum_probs=61.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCC-cchHHHHhcccC---------C--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHP-QEILSLFSSTSD---------P--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~-~~~l~~~~~~~~---------~--~~~~~~ 758 (818)
|+|||+++++.+||+|||+++.............||..|+||| ..+ ....+.|+.... + .....+
T Consensus 126 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~ 205 (318)
T cd05582 126 PENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE 205 (318)
T ss_pred HHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH
Confidence 8999999999999999999987654433445578999999999 111 112333432211 0 000001
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQR 799 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~ 799 (818)
..+....... ..+......+.++...|++.+|++||++.+
T Consensus 206 ~~~~i~~~~~-~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 206 TMTMILKAKL-GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHcCCC-CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1111000000 001111234556777999999999999655
No 282
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.85 E-value=2.4e-09 Score=110.92 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=62.8
Q ss_pred ccccccCCCC-cccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCCC--cccc
Q 003465 694 FNNILLNSEF-EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPH--ITLT 757 (818)
Q Consensus 694 ~~NILLd~~~-~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~--~~~~ 757 (818)
++||++|++. .+|++|||.++.............|++.|+||| ...+...+.|.. ...+. ....
T Consensus 129 ~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 208 (257)
T cd08225 129 SQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH 208 (257)
T ss_pred HHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 7899999885 579999999987654433333456899999999 212222223321 11111 1111
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
+.+.........+........+.++..+|++.+|++||+|.+|++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 209 QLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1111111111000111122346677789999999999999999763
No 283
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.85 E-value=3.2e-09 Score=110.03 Aligned_cols=108 Identities=19% Similarity=0.149 Sum_probs=62.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CC-CcchHHHHhcc---------cCCCcccc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KH-PQEILSLFSST---------SDPHITLT-- 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~-~~~~l~~~~~~---------~~~~~~~~-- 757 (818)
++||++++++.+||+|||+++...... ......|+..|+||| .. +....+.|+.. ..+.....
T Consensus 130 ~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~ 208 (258)
T cd06632 130 GANILVDTNGVVKLADFGMAKQVVEFS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV 208 (258)
T ss_pred HHHEEECCCCCEEEccCccceeccccc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH
Confidence 799999999999999999998764333 234466899999999 22 22222333211 11110000
Q ss_pred ceecccCC-CcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YILDQRIS-PPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~~d~~l~-~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+.+..... ......+......+.++..+|++.+|.+||+|.++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 209 AAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 00000000 0000011112244566778999999999999999875
No 284
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.85 E-value=4.3e-09 Score=109.46 Aligned_cols=106 Identities=17% Similarity=0.132 Sum_probs=61.3
Q ss_pred ccccccCCCCc-------ccccccccceeccCCCCCccccccccceeCCCCC----C-cchHHHHhcc----------cC
Q 003465 694 FNNILLNSEFE-------AFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH----P-QEILSLFSST----------SD 751 (818)
Q Consensus 694 ~~NILLd~~~~-------~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~----~-~~~l~~~~~~----------~~ 751 (818)
|+|||++.++. +|++|||+++.... .....|+.+|+|||.. . ....+.|+.. ..
T Consensus 133 p~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~ 208 (262)
T cd05077 133 TKNILLAREGIDGECGPFIKLSDPGIPITVLS----RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEI 208 (262)
T ss_pred cccEEEecCCccCCCCceeEeCCCCCCccccC----cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 89999987764 89999999876532 1234688899999921 1 1122333211 11
Q ss_pred CCc--cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 752 PHI--TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 752 ~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
+.. ...+. +....... .........+.+++..|++.+|++||+|.++++.+.
T Consensus 209 p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 209 PLKDKTLAEK-ERFYEGQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred CCCCcchhHH-HHHHhcCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 110 00000 00000000 001112345677888999999999999999998763
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.85 E-value=3.4e-09 Score=109.67 Aligned_cols=108 Identities=20% Similarity=0.278 Sum_probs=62.4
Q ss_pred ccccccCCC-CcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcc-----------cCCCcccc
Q 003465 694 FNNILLNSE-FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSST-----------SDPHITLT 757 (818)
Q Consensus 694 ~~NILLd~~-~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~-----------~~~~~~~~ 757 (818)
++||+++++ ..+|++|||+++...... ......|+.+|+||| +.++...+.|... .+......
T Consensus 129 ~~nil~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 207 (256)
T cd08220 129 TQNILLDKHKMVVKIGDFGISKILSSKS-KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP 207 (256)
T ss_pred HHHEEEcCCCCEEEEccCCCceecCCCc-cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH
Confidence 889999854 568999999998764432 223456899999999 2111112223211 11111111
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
............+.+......+.++...|++.+|++||+|.|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 208 ALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111111111110111123345667888999999999999999986
No 286
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.85 E-value=5.4e-09 Score=110.71 Aligned_cols=43 Identities=33% Similarity=0.318 Sum_probs=35.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++.............++..|+|||
T Consensus 134 p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE 176 (293)
T cd07843 134 TSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPE 176 (293)
T ss_pred HHHEEECCCCcEEEeecCceeeccCCccccccccccccccCch
Confidence 8999999999999999999997754433334456788999999
No 287
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.85 E-value=5.8e-09 Score=110.45 Aligned_cols=110 Identities=18% Similarity=0.183 Sum_probs=64.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------ccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~--~~~~~~ 758 (818)
++||+++.++.+||+|||++..............|+..|+|||. ..+...+.|.. ...+ .....+
T Consensus 143 p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~ 222 (293)
T cd06647 143 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (293)
T ss_pred HHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 78999999999999999998876544333344578999999991 11112223321 1111 111001
Q ss_pred eecccC-CCcC-ccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 759 ILDQRI-SPPK-KQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 759 ~~d~~l-~~~~-~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.+.... .+.. ...+......+.+++..|++.+|++||++.+++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 223 ALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred heeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111000 0110 00111223346678889999999999999999864
No 288
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.84 E-value=3.4e-09 Score=122.24 Aligned_cols=108 Identities=24% Similarity=0.301 Sum_probs=67.3
Q ss_pred ccccccCCCCcccccccccceecc-------C---------C--CCCccccccccceeCCC------CCCcc-hHHHHh-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLN-------S---------D--SSNRTLIAGTYRYIAPA------KHPQE-ILSLFS- 747 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~-------~---------~--~~~~~~~~gt~gy~aPE------~~~~~-~l~~~~- 747 (818)
|.||+||++..+||+|||+|.... . + ....|..+||.-|+||| +.+++ .++.++
T Consensus 725 P~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSL 804 (1351)
T KOG1035|consen 725 PRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSL 804 (1351)
T ss_pred cceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHH
Confidence 899999999999999999998731 0 0 11346788999999999 11233 222221
Q ss_pred -----cccCCCcc-------ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 748 -----STSDPHIT-------LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 748 -----~~~~~~~~-------~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
...++.++ +..+-++.++.+. .....++..-.+++.+.++.||.+|||+.|+++
T Consensus 805 GIVlFEM~yPF~TsMERa~iL~~LR~g~iP~~~-~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 805 GIVLFEMLYPFGTSMERASILTNLRKGSIPEPA-DFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHHhccCCchHHHHHHHHhcccCCCCCCc-ccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 11111111 1222233443331 123344555566778999999999999999875
No 289
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.84 E-value=4.1e-09 Score=111.32 Aligned_cols=106 Identities=20% Similarity=0.199 Sum_probs=64.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CC----CcchHHHHh---------cccCCCcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KH----PQEILSLFS---------STSDPHIT-- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~----~~~~l~~~~---------~~~~~~~~-- 755 (818)
|+||+++++..+||+|||+++.+.... ......|+..|+||| .. .+...+.|. ....+...
T Consensus 136 p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 214 (288)
T cd06616 136 PSNILLDRNGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN 214 (288)
T ss_pred HHHEEEccCCcEEEeecchhHHhccCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc
Confidence 889999999999999999998664332 223346899999999 11 111222232 11111110
Q ss_pred -----ccceec---ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 756 -----LTYILD---QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 756 -----~~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
+.++.. +.+... ........+.+++..|++.+|++||++.+|++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 215 SVFDQLTQVVKGDPPILSNS---EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred hHHHHHhhhcCCCCCcCCCc---CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011110 111111 111234456778889999999999999999863
No 290
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.84 E-value=4.3e-09 Score=109.46 Aligned_cols=110 Identities=21% Similarity=0.291 Sum_probs=66.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC----CcchHHHHhc---------ccCCC--c---c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH----PQEILSLFSS---------TSDPH--I---T 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~----~~~~l~~~~~---------~~~~~--~---~ 755 (818)
++||+++.++.+|++|||+++.............|+..|+|||.. .+...+.|.. ...+. . .
T Consensus 128 ~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~ 207 (264)
T cd06623 128 PSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS 207 (264)
T ss_pred HHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC
Confidence 789999999999999999999875544433456789999999921 1111222321 11111 0 0
Q ss_pred ccceecccCCCcCccchHH-HHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 756 LTYILDQRISPPKKQKIVQ-DIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~-~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
..+.+...........+.. ....+.++...|++.+|++||++.++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 208 FFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0111111111111011122 34566778889999999999999999863
No 291
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.83 E-value=5.9e-09 Score=111.36 Aligned_cols=43 Identities=28% Similarity=0.291 Sum_probs=34.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+|++|||+++.........+...++..|+|||
T Consensus 136 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE 178 (309)
T cd07845 136 VSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPE 178 (309)
T ss_pred HHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChh
Confidence 8999999999999999999997754433333445688999999
No 292
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.83 E-value=4.1e-09 Score=117.91 Aligned_cols=42 Identities=21% Similarity=0.257 Sum_probs=33.2
Q ss_pred ccccccCCCC-cccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEF-EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~-~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|.+. .+||+|||+|+.+..... .....||.+|+|||
T Consensus 198 p~NILl~~~~~~vkL~DFGla~~~~~~~~-~~~~~~t~~y~aPE 240 (440)
T PTZ00036 198 PQNLLIDPNTHTLKLCDFGSAKNLLAGQR-SVSYICSRFYRAPE 240 (440)
T ss_pred HHHEEEcCCCCceeeeccccchhccCCCC-cccCCCCcCccCHH
Confidence 8999999664 799999999997644322 23456899999999
No 293
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.83 E-value=5.2e-09 Score=116.81 Aligned_cols=43 Identities=33% Similarity=0.377 Sum_probs=35.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE 736 (818)
++|||++.++.+||+|||+++....... .....+||.+|+|||
T Consensus 288 P~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE 332 (461)
T PHA03211 288 TENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPE 332 (461)
T ss_pred HHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHH
Confidence 8999999999999999999997644322 223567999999999
No 294
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.83 E-value=5e-09 Score=109.25 Aligned_cols=106 Identities=20% Similarity=0.250 Sum_probs=62.1
Q ss_pred ccccccCCCCcccccccccceeccCCCC------CccccccccceeCCCC----CCcchHHHHh---------cccCC--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS------NRTLIAGTYRYIAPAK----HPQEILSLFS---------STSDP-- 752 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~------~~~~~~gt~gy~aPE~----~~~~~l~~~~---------~~~~~-- 752 (818)
|+||++++++.+||+|||+++....... ......|+..|+|||. .+....+.|. ....+
T Consensus 134 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 213 (267)
T cd06628 134 GANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFP 213 (267)
T ss_pred HHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCC
Confidence 8999999999999999999987753211 1123468899999991 1111122232 11111
Q ss_pred Ccc-ccceec--ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 753 HIT-LTYILD--QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 753 ~~~-~~~~~d--~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
... ...+.. ....... +......+..+...|++.+|.+||++.||++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 214 DCTQLQAIFKIGENASPEI---PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CccHHHHHHHHhccCCCcC---CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 100 000000 0011111 1223345566777999999999999999875
No 295
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.83 E-value=2.1e-09 Score=113.30 Aligned_cols=108 Identities=16% Similarity=0.124 Sum_probs=61.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCCC--cccc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPH--ITLT- 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~--~~~~- 757 (818)
|+||++|++.++||+|||+++....... .....|+..|+||| ...+...+.|.. ...+. ....
T Consensus 130 p~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~ 208 (285)
T cd05605 130 PENILLDDYGHIRISDLGLAVEIPEGET-IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV 208 (285)
T ss_pred HHHEEECCCCCEEEeeCCCceecCCCCc-cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence 8999999999999999999987643322 23457999999999 111111122321 11111 0000
Q ss_pred --ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 003465 758 --YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQ 802 (818)
Q Consensus 758 --~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~ 802 (818)
+.+...+.......+......+.+++..|++.||++|| ++.++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 209 KREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 00111111100011112234566788899999999999 6777754
No 296
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.83 E-value=7.9e-09 Score=109.97 Aligned_cols=43 Identities=37% Similarity=0.455 Sum_probs=34.5
Q ss_pred ccccccCCCCcccccccccceeccCCC-CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS-SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~-~~~~~~~gt~gy~aPE 736 (818)
++||++++++.+||+|||+++...... .......++..|+|||
T Consensus 144 p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE 187 (302)
T cd07864 144 CSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPE 187 (302)
T ss_pred HHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChH
Confidence 789999999999999999998775443 2223445788999999
No 297
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=98.83 E-value=4.7e-09 Score=115.58 Aligned_cols=111 Identities=14% Similarity=0.196 Sum_probs=67.9
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC---CCC-cchHHHHhcc------------cCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA---KHP-QEILSLFSST------------SDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE---~~~-~~~l~~~~~~------------~~~~~~ 755 (818)
++|||++++.++|++|||+++....... ......|+..|+||| ..+ ....+.|... .+....
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 7899999999999999999987643321 122345788999999 111 1122333211 111101
Q ss_pred cc----ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 756 LT----YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 756 ~~----~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.. +.+........ +......+.+++..||+.+|.+||+|++|++.|+++
T Consensus 347 ~~~~~~~~~~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 347 MNEQFYNAIKRGYRMAK---PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred chHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11 11111111111 112335677888899999999999999999999865
No 298
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.83 E-value=2.8e-09 Score=116.67 Aligned_cols=43 Identities=23% Similarity=0.393 Sum_probs=35.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++....... .....+||+.|+|||
T Consensus 170 p~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE 213 (370)
T cd05596 170 PDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPE 213 (370)
T ss_pred HHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHH
Confidence 8999999999999999999987654322 234567999999999
No 299
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.82 E-value=1.6e-09 Score=117.01 Aligned_cols=40 Identities=30% Similarity=0.502 Sum_probs=34.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|.++++||+|||+++..... ....+||++|+|||
T Consensus 159 p~NILl~~~~~ikL~DFG~a~~~~~~---~~~~~gt~~y~aPE 198 (340)
T PTZ00426 159 PENLLLDKDGFIKMTDFGFAKVVDTR---TYTLCGTPEYIAPE 198 (340)
T ss_pred HHHEEECCCCCEEEecCCCCeecCCC---cceecCChhhcCHH
Confidence 89999999999999999999876432 23467999999999
No 300
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.82 E-value=4.9e-09 Score=109.18 Aligned_cols=106 Identities=21% Similarity=0.166 Sum_probs=62.1
Q ss_pred ccccccCCCCcccccccccceeccCC------CCCccccccccceeCCCC----CCcchHHHHhc---------ccCCCc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD------SSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDPHI 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~------~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~~~ 754 (818)
|+||++|+++.+|++|||+++..... ........|+.+|+|||. ......+.|.. ...+..
T Consensus 130 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 209 (265)
T cd06631 130 GNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLA 209 (265)
T ss_pred HHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccc
Confidence 89999999999999999999865321 111234578999999992 11112223321 111111
Q ss_pred cccc------eecc-cCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 755 TLTY------ILDQ-RISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 755 ~~~~------~~d~-~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.... +... ...... +......+..++.+|++.+|++||+|.+|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 210 SMDRLAAMFYIGAHRGLMPRL---PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred cCChHHHHHHhhhccCCCCCC---CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1000 0000 000111 1122344566778999999999999999875
No 301
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.82 E-value=3.7e-09 Score=108.89 Aligned_cols=107 Identities=23% Similarity=0.272 Sum_probs=63.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCCCccc--cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPHITL--TY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~~~~--~~ 758 (818)
|+||++++++.+||+|||.++....... .....|+.+|+||| ..++...+.|.. ...+.... .+
T Consensus 126 p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 204 (253)
T cd05122 126 AANILLTSDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK 204 (253)
T ss_pred HHHEEEccCCeEEEeecccccccccccc-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH
Confidence 8999999999999999999987654432 34567899999999 111111222221 11111000 00
Q ss_pred e---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 I---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
. ......... .........+.+++..|++.+|++||++.+|++
T Consensus 205 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 205 ALFKIATNGPPGL-RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHhcCCCCc-CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 000000000 001111345677888999999999999999875
No 302
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.82 E-value=9.7e-09 Score=107.25 Aligned_cols=43 Identities=21% Similarity=0.410 Sum_probs=33.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE 736 (818)
|+||++++++++|++|||+++....... ......|+.+|+|||
T Consensus 128 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 172 (269)
T cd05087 128 LRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPE 172 (269)
T ss_pred cceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHh
Confidence 8999999999999999999986533321 123456788999999
No 303
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.82 E-value=4.4e-09 Score=112.76 Aligned_cols=43 Identities=30% Similarity=0.378 Sum_probs=34.2
Q ss_pred cccccc----CCCCcccccccccceeccCCCC---CccccccccceeCCC
Q 003465 694 FNNILL----NSEFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILL----d~~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE 736 (818)
|+|||+ +.++++||+|||+|+....... ......||++|+|||
T Consensus 136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE 185 (317)
T cd07868 136 PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 185 (317)
T ss_pred HHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCH
Confidence 899999 5678999999999997754321 234567999999999
No 304
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.81 E-value=8.3e-09 Score=111.67 Aligned_cols=43 Identities=37% Similarity=0.413 Sum_probs=35.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC-----CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-----NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-----~~~~~~gt~gy~aPE 736 (818)
|+||++|+++.+||+|||+++....... ......||.+|+|||
T Consensus 135 p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 182 (337)
T cd07852 135 PSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPE 182 (337)
T ss_pred HHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCce
Confidence 8999999999999999999987643321 223467899999999
No 305
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.81 E-value=6.7e-09 Score=108.67 Aligned_cols=109 Identities=21% Similarity=0.193 Sum_probs=63.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC--------Cc-chHHHHhc---------ccCCCcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH--------PQ-EILSLFSS---------TSDPHIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~--------~~-~~l~~~~~---------~~~~~~~ 755 (818)
++||++++++.+|++|||+++.............|+..|+|||.. .. ...+.|.. ...+...
T Consensus 141 p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 220 (275)
T cd06608 141 GQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCD 220 (275)
T ss_pred HHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccc
Confidence 899999999999999999998764433333456699999999911 00 01122321 1111110
Q ss_pred c--cceecccCCCcC--ccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 756 L--TYILDQRISPPK--KQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 756 ~--~~~~d~~l~~~~--~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
. ...+........ ..........+.+++.+|++.+|++||++.+|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 221 MHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 000000000000 0111223345667888999999999999999986
No 306
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.81 E-value=3.9e-09 Score=120.78 Aligned_cols=43 Identities=21% Similarity=0.101 Sum_probs=34.8
Q ss_pred ccccccCC-CCcccccccccceeccCCC-CCccccccccceeCCC
Q 003465 694 FNNILLNS-EFEAFFGNFGVARLLNSDS-SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~-~~~~ki~DFGla~~~~~~~-~~~~~~~gt~gy~aPE 736 (818)
|+|||+|+ ++.+||+|||+|+.+.... .......||++|+|||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE 327 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPE 327 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChH
Confidence 89999996 5799999999998765432 2334568999999999
No 307
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=4.8e-09 Score=113.57 Aligned_cols=109 Identities=18% Similarity=0.231 Sum_probs=68.4
Q ss_pred ccccccC-CCCcccccccccceeccCCCCCccccccccceeCCC---CCC---cchHHHHhcccC------CCcccccee
Q 003465 694 FNNILLN-SEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHP---QEILSLFSSTSD------PHITLTYIL 760 (818)
Q Consensus 694 ~~NILLd-~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~---~~~l~~~~~~~~------~~~~~~~~~ 760 (818)
..|||++ -.+..||+|||-+|.+..-...+.+..||..||||| +.| ....+.|+...- ......++-
T Consensus 703 GDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elg 782 (1226)
T KOG4279|consen 703 GDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELG 782 (1226)
T ss_pred CCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecC
Confidence 5799996 578999999999998866555667789999999999 111 113344643221 001111111
Q ss_pred cc-------cCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 761 DQ-------RISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 761 d~-------~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.| .+-...++.+.+--...-..+++|-+++|.+||+++++++
T Consensus 783 spqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 783 SPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 11 1100011224444445566788999999999999999874
No 308
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.81 E-value=5.4e-09 Score=109.15 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=64.7
Q ss_pred ccccccCCCC-----cccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHh---------c-ccCC
Q 003465 694 FNNILLNSEF-----EAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFS---------S-TSDP 752 (818)
Q Consensus 694 ~~NILLd~~~-----~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~---------~-~~~~ 752 (818)
|+||+++.+. .+|++|||+++....... ......++..|+|||. ......+.|+ . ...+
T Consensus 134 p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 134 ARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred hheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 8999999887 899999999986643211 1123346788999991 1111111221 1 1111
Q ss_pred --Cccccce---ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 753 --HITLTYI---LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 753 --~~~~~~~---~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.....+. ++....... +......+.+++.+|++.+|++||+|.+|.+.|++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 214 YPALNNQEVLQHVTAGGRLQK---PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred CcccCHHHHHHHHhcCCccCC---cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1110111 111111111 22234556788889999999999999999999863
No 309
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.81 E-value=4.6e-09 Score=108.49 Aligned_cols=108 Identities=20% Similarity=0.240 Sum_probs=63.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhc---------ccCCCccc---c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDPHITL---T 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~~~~~---~ 757 (818)
|+||++++++.+||+|||+++.............|+.+|+|||. .+....+.|.. ...+.... .
T Consensus 127 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~ 206 (254)
T cd06627 127 AANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA 206 (254)
T ss_pred HHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 89999999999999999999987554433345678999999991 11111222221 11111000 0
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
...+.. .......+......+..++..|++.+|++||++.+++.
T Consensus 207 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 207 ALFRIV-QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHh-ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 000000 00000011112345567788999999999999999874
No 310
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.81 E-value=4.9e-09 Score=108.46 Aligned_cols=109 Identities=20% Similarity=0.244 Sum_probs=64.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---C-CcchHHHHh---------cccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---H-PQEILSLFS---------STSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~-~~~~l~~~~---------~~~~~--~~~~~~ 758 (818)
++||+++++..+||+|||++..............|+..|+|||. . .....+.|. ....+ .....+
T Consensus 131 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~ 210 (258)
T cd08215 131 PQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE 210 (258)
T ss_pred hHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH
Confidence 89999999999999999999876544323334578999999991 1 111122222 11111 111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+.+..........+......+.+++..|++.+|++||++.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 211 LALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11111111110111123345667888999999999999999875
No 311
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.81 E-value=3e-09 Score=112.16 Aligned_cols=42 Identities=26% Similarity=0.301 Sum_probs=34.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++|+++.+|++|||+++...... ......|+.+|+|||
T Consensus 130 p~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~g~~~~~aPE 171 (285)
T cd05632 130 PENILLDDYGHIRISDLGLAVKIPEGE-SIRGRVGTVGYMAPE 171 (285)
T ss_pred HHHEEECCCCCEEEecCCcceecCCCC-cccCCCCCcCccChH
Confidence 889999999999999999998764332 223457999999999
No 312
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.80 E-value=6.8e-09 Score=109.29 Aligned_cols=108 Identities=21% Similarity=0.254 Sum_probs=62.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC----C---cc-hHHHHh---------cccCCCccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH----P---QE-ILSLFS---------STSDPHITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~----~---~~-~l~~~~---------~~~~~~~~~ 756 (818)
|+||++|+++.+||+|||+++...... ..+...|+..|+|||.- . .+ ..+.|. ....+....
T Consensus 132 p~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (283)
T cd06617 132 PSNVLINRNGQVKLCDFGISGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSW 210 (283)
T ss_pred HHHEEECCCCCEEEeeccccccccccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcc
Confidence 889999999999999999998764322 22345689999999921 1 11 112222 111111100
Q ss_pred c---ceecccCCCcCccchH-HHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 757 T---YILDQRISPPKKQKIV-QDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 757 ~---~~~d~~l~~~~~~~~~-~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
. +.+...+.......+. .....+.+++..|++.+|++||++.+|++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 211 KTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0000101110000011 12245667888999999999999999985
No 313
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.80 E-value=4.5e-09 Score=109.40 Aligned_cols=107 Identities=21% Similarity=0.231 Sum_probs=63.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcc---------cCCCc------
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSST---------SDPHI------ 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~---------~~~~~------ 754 (818)
++||++++++.+||+|||+++........ ...|+.+|+||| ..+....+.|... ..+..
T Consensus 129 ~~ni~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 206 (265)
T cd06605 129 PSNILVNSRGQIKLCDFGVSGQLVNSLAK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP 206 (265)
T ss_pred HHHEEECCCCCEEEeecccchhhHHHHhh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc
Confidence 78999999999999999998766432211 267899999999 2121122333211 11111
Q ss_pred -cccceecccCCCcCccchHH-HHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 755 -TLTYILDQRISPPKKQKIVQ-DIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 755 -~~~~~~d~~l~~~~~~~~~~-~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
...+.++..+.......+.. ....+.+++..|+..+|++||++.+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 207 DGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 01111111111111011111 3345677888999999999999999875
No 314
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.80 E-value=7.7e-09 Score=110.89 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=64.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC-------CcchHHHHhcc---------cCCCcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH-------PQEILSLFSST---------SDPHIT-- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~-------~~~~l~~~~~~---------~~~~~~-- 755 (818)
|+||+++.++.+||+|||+++.... .....|++.|+|||.. .....+.|... ..+...
T Consensus 153 p~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 228 (317)
T cd06635 153 AGNILLTEPGQVKLADFGSASIASP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 228 (317)
T ss_pred cccEEECCCCCEEEecCCCccccCC----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence 8999999999999999999876532 2335688999999931 11123334321 111100
Q ss_pred cc----ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 LT----YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 ~~----~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.. .+......... .......+.+++..|++.+|++||++.+|++.+..
T Consensus 229 ~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 229 AMSALYHIAQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred HHHHHHHHHhccCCCCC---CccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 00 01111111111 11223446678889999999999999999976543
No 315
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=98.80 E-value=2e-09 Score=105.66 Aligned_cols=51 Identities=22% Similarity=0.372 Sum_probs=42.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHh
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFS 747 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~ 747 (818)
|.|||||.++..||+|||+||.+... +-+.+||+-|+||| .+|+. .+++|+
T Consensus 172 PENiLlD~~G~iKitDFGFAK~v~~r---T~TlCGTPeYLAPEii~sk~ynkavDWWa 226 (355)
T KOG0616|consen 172 PENLLLDQNGHIKITDFGFAKRVSGR---TWTLCGTPEYLAPEIIQSKGYNKAVDWWA 226 (355)
T ss_pred hHHeeeccCCcEEEEeccceEEecCc---EEEecCCccccChHHhhcCCCCcchhHHH
Confidence 89999999999999999999987432 55789999999999 44544 556665
No 316
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.80 E-value=3.4e-09 Score=110.00 Aligned_cols=103 Identities=13% Similarity=0.207 Sum_probs=61.4
Q ss_pred ccccccCCCCcc--------cccccccceeccCCCCCccccccccceeCCCC-----CCcchHHHHhccc----------
Q 003465 694 FNNILLNSEFEA--------FFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK-----HPQEILSLFSSTS---------- 750 (818)
Q Consensus 694 ~~NILLd~~~~~--------ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~-----~~~~~l~~~~~~~---------- 750 (818)
|+||+++.+.++ |++|||++..... .....|+++|+|||. ......+.|+...
T Consensus 128 p~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~ 203 (258)
T cd05078 128 AKNVLLIREEDRKTGNPPFIKLSDPGISITVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGD 203 (258)
T ss_pred cceEEEecccccccCCCceEEecccccccccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCC
Confidence 899999988775 8888888765422 234568899999992 1122233343111
Q ss_pred CCCcccc-----ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 751 DPHITLT-----YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 751 ~~~~~~~-----~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.+..... .+...+. .. +......+.+++..|++.+|++||+|++++++|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 204 KPLSALDSQKKLQFYEDRH--QL---PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred CChhhccHHHHHHHHHccc--cC---CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1100000 0001110 01 1112245678888999999999999999999874
No 317
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.79 E-value=3.5e-09 Score=114.01 Aligned_cols=43 Identities=23% Similarity=0.437 Sum_probs=35.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++............+||++|+|||
T Consensus 124 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE 166 (327)
T cd05617 124 LDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPE 166 (327)
T ss_pred HHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHH
Confidence 8999999999999999999986433333344577999999999
No 318
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.79 E-value=4.6e-09 Score=112.52 Aligned_cols=43 Identities=30% Similarity=0.362 Sum_probs=34.7
Q ss_pred ccccccCC----CCcccccccccceeccCCCC---CccccccccceeCCC
Q 003465 694 FNNILLNS----EFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~----~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE 736 (818)
|+||+++. ++.+|++|||+++....... ......||+.|+|||
T Consensus 136 p~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 185 (316)
T cd07842 136 PANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPE 185 (316)
T ss_pred HHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHH
Confidence 78999999 99999999999987643322 233567899999999
No 319
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.79 E-value=9.6e-09 Score=108.30 Aligned_cols=43 Identities=30% Similarity=0.325 Sum_probs=34.8
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
|+||++++++++|++|||+++....... ..+...++..|+|||
T Consensus 128 p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE 171 (287)
T cd07840 128 GSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPE 171 (287)
T ss_pred HHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCce
Confidence 8999999999999999999987754321 234456788999999
No 320
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=98.79 E-value=1.6e-08 Score=108.01 Aligned_cols=41 Identities=34% Similarity=0.441 Sum_probs=33.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++.+|++|||+++..... ......|+.+|+|||
T Consensus 128 p~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~aPE 168 (308)
T cd06615 128 PSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPE 168 (308)
T ss_pred hHHEEEecCCcEEEccCCCccccccc--ccccCCCCcCccChh
Confidence 78999999999999999999865332 223457899999999
No 321
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.79 E-value=6.7e-09 Score=111.39 Aligned_cols=43 Identities=30% Similarity=0.378 Sum_probs=34.2
Q ss_pred cccccc----CCCCcccccccccceeccCCCC---CccccccccceeCCC
Q 003465 694 FNNILL----NSEFEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILL----d~~~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE 736 (818)
|+|||+ ++++++||+|||+++....... ......||.+|+|||
T Consensus 136 p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE 185 (317)
T cd07867 136 PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 185 (317)
T ss_pred HHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcH
Confidence 899999 6678999999999997754321 234567999999999
No 322
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.79 E-value=4.5e-09 Score=114.94 Aligned_cols=43 Identities=23% Similarity=0.370 Sum_probs=35.6
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+|+.+..... .....+||++|+|||
T Consensus 170 p~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE 213 (370)
T cd05621 170 PDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPE 213 (370)
T ss_pred HHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHH
Confidence 8999999999999999999997753322 224567999999999
No 323
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.78 E-value=6.4e-09 Score=108.78 Aligned_cols=110 Identities=17% Similarity=0.305 Sum_probs=64.0
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCCC----C--CcchHHHHhc---------ccCC--Cc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPAK----H--PQEILSLFSS---------TSDP--HI 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE~----~--~~~~l~~~~~---------~~~~--~~ 754 (818)
++||++++++.+|++|||+++...... .......|+.+|+|||. . +....+.|+. ...+ ..
T Consensus 136 ~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 215 (272)
T cd06629 136 ADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE 215 (272)
T ss_pred hhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc
Confidence 799999999999999999998654321 12345678999999991 1 2112223321 1111 10
Q ss_pred c-ccceec---ccCCCcCc-cchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 755 T-LTYILD---QRISPPKK-QKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 755 ~-~~~~~d---~~l~~~~~-~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
. ...+.+ ........ ....+....+.+++..|++.+|++||+|.+|++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 216 EAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred chHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0 000111 11111110 0011223456678889999999999999999863
No 324
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.78 E-value=1.3e-08 Score=110.88 Aligned_cols=42 Identities=29% Similarity=0.271 Sum_probs=34.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+|++|||+++...... ......||.+|+|||
T Consensus 146 p~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE 187 (353)
T cd07850 146 PSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 187 (353)
T ss_pred HHHEEECCCCCEEEccCccceeCCCCC-CCCCCcccccccCHH
Confidence 899999999999999999998764332 233456889999999
No 325
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.78 E-value=8.6e-09 Score=109.35 Aligned_cols=107 Identities=21% Similarity=0.229 Sum_probs=63.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---CC----cc-hHHHHhc---------ccCCCcc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---HP----QE-ILSLFSS---------TSDPHIT- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~~----~~-~l~~~~~---------~~~~~~~- 755 (818)
|+||++|+++.+||+|||+++.+..... .....|+.+|+|||. .. .+ ..+.|+. ...+...
T Consensus 143 p~nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 221 (296)
T cd06618 143 PSNILLDASGNVKLCDFGISGRLVDSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC 221 (296)
T ss_pred HHHEEEcCCCCEEECccccchhccCCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcc
Confidence 7899999999999999999987643322 233468899999991 11 11 1222321 1111100
Q ss_pred ------ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 756 ------LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 756 ------~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
...+++....... ........+.+++.+|++.+|++||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 222 KTEFEVLTKILQEEPPSLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred hhHHHHHHHHhcCCCCCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111111000 011123456778889999999999999999864
No 326
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.78 E-value=5.8e-09 Score=109.44 Aligned_cols=112 Identities=19% Similarity=0.202 Sum_probs=64.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhc---------ccCCCcc-----
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSS---------TSDPHIT----- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~---------~~~~~~~----- 755 (818)
|+||++++++.+||+|||+++...... ......||.+|+||| ..+.+ ..+.|+. ...+...
T Consensus 123 p~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~ 201 (277)
T cd05607 123 PENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV 201 (277)
T ss_pred hHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh
Confidence 899999999999999999998764332 223457999999999 11111 2223321 1111100
Q ss_pred -ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 756 -LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 756 -~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
..++....+..............+.+++..|++.+|++||++.|+++....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~ 253 (277)
T cd05607 202 AKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRK 253 (277)
T ss_pred hHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhc
Confidence 011111111111000001123345678889999999999999877654443
No 327
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.77 E-value=1.1e-08 Score=107.73 Aligned_cols=43 Identities=28% Similarity=0.313 Sum_probs=34.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++++|++|||+++.............+|..|+|||
T Consensus 128 p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE 170 (284)
T cd07836 128 PQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPD 170 (284)
T ss_pred HHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChH
Confidence 7899999999999999999987644333334456889999999
No 328
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.77 E-value=1.1e-08 Score=105.94 Aligned_cols=107 Identities=18% Similarity=0.130 Sum_probs=65.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------cc--CCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TS--DPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~--~~~~~~~~ 758 (818)
++||+++++..+|++|||+++..... ......|+.+|+||| +..+...+.|.. .. +......+
T Consensus 131 ~~ni~~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~ 208 (256)
T cd08530 131 SANILLVANDLVKIGDLGISKVLKKN--MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD 208 (256)
T ss_pred cceEEEecCCcEEEeeccchhhhccC--CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 78999999999999999999877544 223356889999999 111112222321 11 11111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+..........+.+......+..++..|++.+|++||++.++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 209 LRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11111111111112234456778888999999999999999875
No 329
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.77 E-value=3.7e-09 Score=114.44 Aligned_cols=43 Identities=30% Similarity=0.343 Sum_probs=35.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||+++.++.+||+|||+++.............|+..|+|||
T Consensus 136 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE 178 (337)
T cd07858 136 PSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPE 178 (337)
T ss_pred HHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChH
Confidence 8999999999999999999987654323334456889999999
No 330
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.77 E-value=1.2e-08 Score=107.64 Aligned_cols=107 Identities=22% Similarity=0.311 Sum_probs=63.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---CCcc-hHHHHh---------cccCCCccc----
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---HPQE-ILSLFS---------STSDPHITL---- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~~~~-~l~~~~---------~~~~~~~~~---- 756 (818)
|+||+++.++++||+|||++..............|+.+|+|||. .+.+ ..+.|. ....+....
T Consensus 144 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~ 223 (286)
T cd06614 144 SDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR 223 (286)
T ss_pred hhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 89999999999999999998766443333334568899999991 1111 111221 111111100
Q ss_pred --cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 757 --TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 757 --~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
..+........ .........+.+++..|++.+|.+||++.+|++
T Consensus 224 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 224 ALFLITTKGIPPL--KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHHHHhcCCCCC--cchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 00111111110 011113345677888999999999999999985
No 331
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.77 E-value=1e-08 Score=106.83 Aligned_cols=109 Identities=20% Similarity=0.240 Sum_probs=63.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCC----ccccccccceeCCC----C-CCcchHHHHh---------cccCCCc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN----RTLIAGTYRYIAPA----K-HPQEILSLFS---------STSDPHI- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~----~~~~~gt~gy~aPE----~-~~~~~l~~~~---------~~~~~~~- 754 (818)
++||++|+++.+|++|||+++.+...... .....|+.+|+||| . .....-+.|. ....+..
T Consensus 130 p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~ 209 (267)
T cd06610 130 AGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSK 209 (267)
T ss_pred HHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccc
Confidence 78999999999999999999877543222 23457999999999 1 1211112232 1111111
Q ss_pred -cccceecccCCCcCc--cch---HHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 755 -TLTYILDQRISPPKK--QKI---VQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 755 -~~~~~~d~~l~~~~~--~~~---~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
...+.+...+..... ... ......+.++...|++.+|++||++.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 210 YPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000111111110000 000 122345677888999999999999999875
No 332
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.76 E-value=3.1e-09 Score=110.24 Aligned_cols=109 Identities=20% Similarity=0.251 Sum_probs=65.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC--C---CCcchHHHHhc---------ccCCCcc----
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA--K---HPQEILSLFSS---------TSDPHIT---- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE--~---~~~~~l~~~~~---------~~~~~~~---- 755 (818)
|+||++++++++||+|||.+..............||..|+||| + ..+...+.|+- ...+...
T Consensus 126 p~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~ 205 (260)
T PF00069_consen 126 PENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD 205 (260)
T ss_dssp GGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccch
Confidence 8999999999999999999987533333445678999999999 2 11112333321 1111110
Q ss_pred -ccceecccCCCcCc---cchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 756 -LTYILDQRISPPKK---QKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 756 -~~~~~d~~l~~~~~---~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
..+.+......... .........+.++...|++.+|++||+|.++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 206 DQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111111100000 000011256778888999999999999999975
No 333
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.76 E-value=1.1e-08 Score=106.11 Aligned_cols=106 Identities=17% Similarity=0.107 Sum_probs=62.8
Q ss_pred ccccccCCCC-------cccccccccceeccCCCCCccccccccceeCCCC---C---CcchHHHHhcc----------c
Q 003465 694 FNNILLNSEF-------EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---H---PQEILSLFSST----------S 750 (818)
Q Consensus 694 ~~NILLd~~~-------~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~---~~~~l~~~~~~----------~ 750 (818)
|+||+++.++ .+|++|||+++.... .....|+..|+|||. . +....+.|+.. .
T Consensus 129 p~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~ 204 (259)
T cd05037 129 GKNILVARYGLNEGYVPFIKLSDPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGE 204 (259)
T ss_pred cceEEEecCccccCCceeEEeCCCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCC
Confidence 8999999988 799999999987543 223457778999992 1 11122233211 1
Q ss_pred CCCccc--cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 751 DPHITL--TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 751 ~~~~~~--~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
.+.... .+.......... .+......+.+++..|++.+|.+||+|.+|++.|+
T Consensus 205 ~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 205 EPLSTLSSSEKERFYQDQHR--LPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCcccCCchhHHHHHhcCCC--CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111000 000000000000 01111256778888999999999999999999874
No 334
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.76 E-value=9.4e-09 Score=108.42 Aligned_cols=42 Identities=31% Similarity=0.423 Sum_probs=34.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++||++|+++++|++|||+++....... .....|+..|+|||
T Consensus 135 ~~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~PE 176 (287)
T cd07838 135 PQNILVTSDGQVKIADFGLARIYSFEMA-LTSVVVTLWYRAPE 176 (287)
T ss_pred hhhEEEccCCCEEEeccCcceeccCCcc-cccccccccccChH
Confidence 8999999999999999999988744322 23345889999999
No 335
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.76 E-value=1.2e-08 Score=106.14 Aligned_cols=108 Identities=27% Similarity=0.349 Sum_probs=61.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCC----ccccccccceeCCC----CC---CcchHHHHhc---------ccCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN----RTLIAGTYRYIAPA----KH---PQEILSLFSS---------TSDPH 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~----~~~~~gt~gy~aPE----~~---~~~~l~~~~~---------~~~~~ 753 (818)
++||++++++.+||+|||+++........ .....|+..|+||| .. +....+.|.. ...+.
T Consensus 127 ~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf 206 (264)
T cd06626 127 PANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW 206 (264)
T ss_pred HHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCc
Confidence 78999999999999999999877543221 12357889999999 11 1111222221 11111
Q ss_pred ccc---ccee---cccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 754 ITL---TYIL---DQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 754 ~~~---~~~~---d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
... ..+. ........ +........+.+++..|++.+|++||++.+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 207 SELDNEFQIMFHVGAGHKPPI-PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred cCCcchHHHHHHHhcCCCCCC-CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 0000 00000001 011112344567778999999999999999874
No 336
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.76 E-value=1.8e-08 Score=106.00 Aligned_cols=43 Identities=33% Similarity=0.343 Sum_probs=35.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||.+..............++..|+|||
T Consensus 126 p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE 168 (283)
T cd05118 126 PENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPE 168 (283)
T ss_pred HHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcH
Confidence 8999999999999999999987755432233456888999999
No 337
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.75 E-value=1.5e-08 Score=106.97 Aligned_cols=108 Identities=20% Similarity=0.219 Sum_probs=63.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC----C------cchHHHHh---------cccCCC-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH----P------QEILSLFS---------STSDPH- 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~----~------~~~l~~~~---------~~~~~~- 753 (818)
|+||+++.++.+|++|||+++.+... ......|+.+|+|||.. + +...+.|+ ....+.
T Consensus 131 p~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 208 (286)
T cd06622 131 PTNVLVNGNGQVKLCDFGVSGNLVAS--LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP 208 (286)
T ss_pred HHHEEECCCCCEEEeecCCcccccCC--ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 78999999999999999999866332 22345688999999921 1 11122232 111111
Q ss_pred -ccccceec---ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 754 -ITLTYILD---QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 754 -~~~~~~~d---~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
.......+ ..........+.+....+..++..|++.+|++||++.+++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 209 PETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 11111110 011111101122334556678889999999999999999863
No 338
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.75 E-value=6.5e-09 Score=113.70 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=21.5
Q ss_pred ccccccCCCCcccccccccceec
Q 003465 694 FNNILLNSEFEAFFGNFGVARLL 716 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~ 716 (818)
|+|||+|+++++||+|||+++.+
T Consensus 129 p~NILi~~~~~vkL~DFGla~~~ 151 (363)
T cd05628 129 PDNLLLDSKGHVKLSDFGLCTGL 151 (363)
T ss_pred HHHeEECCCCCEEEeeccCcccc
Confidence 89999999999999999999865
No 339
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.75 E-value=1.4e-08 Score=105.82 Aligned_cols=43 Identities=26% Similarity=0.384 Sum_probs=34.2
Q ss_pred ccccccCCCCcccccccccceeccCC---CCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD---SSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~---~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++.+... ........|+.+|+|||
T Consensus 134 p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 179 (265)
T cd06652 134 GANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPE 179 (265)
T ss_pred HHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChh
Confidence 89999999999999999999866422 11233456999999999
No 340
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.75 E-value=9.1e-09 Score=110.83 Aligned_cols=108 Identities=21% Similarity=0.224 Sum_probs=68.8
Q ss_pred ccccccCCC----CcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhccc---------CCC--c
Q 003465 694 FNNILLNSE----FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSSTS---------DPH--I 754 (818)
Q Consensus 694 ~~NILLd~~----~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~~---------~~~--~ 754 (818)
|+|+|+... +..|++|||+|+.... ......++||++|+||| ..++. ..+.|..+. .+. .
T Consensus 163 pEN~L~~~~~~~~~~ik~~DFGla~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~ 241 (382)
T KOG0032|consen 163 PENLLLASKDEGSGRIKLIDFGLAKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGE 241 (382)
T ss_pred HHHeeeccccCCCCcEEEeeCCCceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCC
Confidence 899999655 4699999999998876 44567889999999999 23433 444554221 111 1
Q ss_pred ----cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 755 ----TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 755 ----~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
....+......... +.+...-..+-.....++..||..|++..++++.
T Consensus 242 ~~~~~~~~i~~~~~~f~~-~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 242 TEFEIFLAILRGDFDFTS-EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ChhHHHHHHHcCCCCCCC-CCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11122223222111 1122223344456669999999999999999884
No 341
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.74 E-value=1.6e-08 Score=103.38 Aligned_cols=108 Identities=22% Similarity=0.211 Sum_probs=65.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhcc---------cCC--C-cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSST---------SDP--H-ITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~~---------~~~--~-~~~~ 757 (818)
++||+++++++++++|||.+....... ......|+..|++||. ..+...+.|... ..+ . ....
T Consensus 115 ~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~ 193 (244)
T smart00220 115 PENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL 193 (244)
T ss_pred HHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 789999999999999999998775432 2344568899999991 121222223211 111 1 1111
Q ss_pred ceecccCCCcCccchHH--HHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YILDQRISPPKKQKIVQ--DIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~--~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+.+............. ....+.+++.+|++.+|++||++.++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 194 ELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 11111111111000000 3456778899999999999999999986
No 342
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.74 E-value=1.4e-08 Score=109.87 Aligned_cols=43 Identities=37% Similarity=0.475 Sum_probs=34.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC----CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS----NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~----~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++....... ..+...|+..|+|||
T Consensus 135 p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE 181 (334)
T cd07855 135 PSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPE 181 (334)
T ss_pred HHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChH
Confidence 8999999999999999999987643221 123457899999999
No 343
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.74 E-value=2.2e-08 Score=105.40 Aligned_cols=42 Identities=29% Similarity=0.331 Sum_probs=34.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++||++|+++.+|++|||+++....... .+...|+..|+|||
T Consensus 127 ~~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~aPE 168 (283)
T cd07830 127 PENLLVSGPEVVKIADFGLAREIRSRPP-YTDYVSTRWYRAPE 168 (283)
T ss_pred hhhEEEcCCCCEEEeecccceeccCCCC-cCCCCCcccccCce
Confidence 8999999999999999999987643322 23346889999999
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.73 E-value=1.4e-08 Score=108.31 Aligned_cols=110 Identities=19% Similarity=0.229 Sum_probs=64.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC-------CCcchHHHHhcc---------cCCCccc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK-------HPQEILSLFSST---------SDPHITL- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~-------~~~~~l~~~~~~---------~~~~~~~- 756 (818)
|+||+++.++.+|++|||+++..... ....|+..|+|||. ......+.|+.. ..+....
T Consensus 143 p~nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 218 (308)
T cd06634 143 AGNILLSEPGLVKLGDFGSASIMAPA----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (308)
T ss_pred HHhEEECCCCcEEECCcccceeecCc----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc
Confidence 89999999999999999999876432 34568899999992 111122333211 1111000
Q ss_pred -cceecccCCCcC-ccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 757 -TYILDQRISPPK-KQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 757 -~~~~d~~l~~~~-~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.+.......... ..........+.+++.+|++.+|++||++.+|++.-.-.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 219 AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred HHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence 000000000000 000112234456778899999999999999998764433
No 345
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.73 E-value=1.1e-08 Score=106.44 Aligned_cols=112 Identities=18% Similarity=0.130 Sum_probs=64.6
Q ss_pred ccccccCCCCcccccccccceeccCCCC--------CccccccccceeCCCC----CCcchHHHHhc---------ccCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--------NRTLIAGTYRYIAPAK----HPQEILSLFSS---------TSDP 752 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--------~~~~~~gt~gy~aPE~----~~~~~l~~~~~---------~~~~ 752 (818)
++||++|++..+|++|||+++....... ......++..|+|||. ......+.|.. ...+
T Consensus 121 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p 200 (265)
T cd05579 121 PDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPP 200 (265)
T ss_pred HHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence 8999999999999999999886543311 2345668899999991 11111122221 1111
Q ss_pred --CccccceecccCCCcCccchHHH--HHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 753 --HITLTYILDQRISPPKKQKIVQD--IALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 753 --~~~~~~~~d~~l~~~~~~~~~~~--~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.....+..+....+.. ..+..+ ...+..+...|++.+|++||++.+|.+.|+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 201 FHGETPEEIFQNILNGKI-EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CCCCCHHHHHHHHhcCCc-CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 1111111111111110 001111 3456678889999999999999777776654
No 346
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.73 E-value=2.3e-08 Score=107.86 Aligned_cols=43 Identities=35% Similarity=0.381 Sum_probs=35.2
Q ss_pred ccccccCCCCcccccccccceeccCCC---CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS---SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~---~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+|++|||+++...... .......||..|+|||
T Consensus 131 p~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 176 (330)
T cd07834 131 PSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPE 176 (330)
T ss_pred HHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCce
Confidence 899999999999999999999875443 1234456888999999
No 347
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.72 E-value=1.8e-08 Score=105.53 Aligned_cols=110 Identities=14% Similarity=0.122 Sum_probs=66.3
Q ss_pred ccccccCCCCcccccccccceeccCCC-CCccccccccceeCCCCC----CcchHHHHhc----------ccCCCcc--c
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS-SNRTLIAGTYRYIAPAKH----PQEILSLFSS----------TSDPHIT--L 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~-~~~~~~~gt~gy~aPE~~----~~~~l~~~~~----------~~~~~~~--~ 756 (818)
|+||++++++.+|++|||+++...... .......++..|+|||.. +....+.|+. ...+... .
T Consensus 145 p~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~ 224 (275)
T cd05046 145 ARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD 224 (275)
T ss_pred cceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch
Confidence 899999999999999999988653322 122344678889999921 1111222321 1111100 0
Q ss_pred cceec----ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 757 TYILD----QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 757 ~~~~d----~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
.+++. ..+.... .......+.+++.+|++.+|++||++.|++++|.+
T Consensus 225 ~~~~~~~~~~~~~~~~---~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 225 EEVLNRLQAGKLELPV---PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HHHHHHHHcCCcCCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 01111 1111111 11233467788889999999999999999998863
No 348
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.72 E-value=2.1e-08 Score=107.10 Aligned_cols=43 Identities=26% Similarity=0.295 Sum_probs=34.1
Q ss_pred ccccccCCCCcccccccccceeccCCCC----CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS----NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~----~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++....... ......|+..|+|||
T Consensus 147 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 193 (310)
T cd07865 147 AANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPE 193 (310)
T ss_pred HHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcH
Confidence 7999999999999999999987643221 123456788999999
No 349
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.72 E-value=5.2e-09 Score=106.76 Aligned_cols=56 Identities=25% Similarity=0.386 Sum_probs=46.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST 749 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~ 749 (818)
..||+||.++++||+|||+.|.---+...+.+.+||+.||||| +.|+. .+++|+..
T Consensus 478 LDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~G 537 (683)
T KOG0696|consen 478 LDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFG 537 (683)
T ss_pred ccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHH
Confidence 5799999999999999999996555555667899999999999 77777 66677643
No 350
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.72 E-value=2.4e-08 Score=104.22 Aligned_cols=43 Identities=21% Similarity=0.392 Sum_probs=32.8
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE 736 (818)
|+|||+|+++.+||+|||+++....... ......++..|+|||
T Consensus 128 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 172 (269)
T cd05042 128 LRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPE 172 (269)
T ss_pred HhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHH
Confidence 8999999999999999999976433211 123345678899999
No 351
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.72 E-value=1.1e-08 Score=112.54 Aligned_cols=23 Identities=22% Similarity=0.339 Sum_probs=21.0
Q ss_pred ccccccCCCCcccccccccceec
Q 003465 694 FNNILLNSEFEAFFGNFGVARLL 716 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~ 716 (818)
|+|||+|.++++||+|||+++.+
T Consensus 129 p~Nili~~~~~~kL~DFGl~~~~ 151 (381)
T cd05626 129 PDNILIDLDGHIKLTDFGLCTGF 151 (381)
T ss_pred HHHEEECCCCCEEEeeCcCCccc
Confidence 89999999999999999998644
No 352
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.72 E-value=1.2e-08 Score=106.91 Aligned_cols=103 Identities=17% Similarity=0.115 Sum_probs=60.1
Q ss_pred ccccccCCCC-------cccccccccceeccCCCCCccccccccceeCCCCC-----CcchHHHHhcc----------cC
Q 003465 694 FNNILLNSEF-------EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH-----PQEILSLFSST----------SD 751 (818)
Q Consensus 694 ~~NILLd~~~-------~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~-----~~~~l~~~~~~----------~~ 751 (818)
|+|||++.++ .+|++|||+++..... ....|+..|+|||.- .....+.|+.. ..
T Consensus 145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~ 220 (274)
T cd05076 145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEV 220 (274)
T ss_pred cccEEEeccCcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 8999998654 3799999998654221 223578899999911 11122333211 11
Q ss_pred CC--cc---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 752 PH--IT---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 752 ~~--~~---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
+. .. ...+.+..... +......+.+++..|++.+|++||+|.+|++.|.
T Consensus 221 p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 221 PLKERTPSEKERFYEKKHRL-----PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred CccccChHHHHHHHHhccCC-----CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 10 00 00111111110 1111235678888999999999999999999874
No 353
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.72 E-value=9.6e-09 Score=109.49 Aligned_cols=113 Identities=18% Similarity=0.062 Sum_probs=63.8
Q ss_pred ccccccCCCCcccccccccceeccCCC---------------CCccccccccceeCCCC----CCcchHHHHhc------
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS---------------SNRTLIAGTYRYIAPAK----HPQEILSLFSS------ 748 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~---------------~~~~~~~gt~gy~aPE~----~~~~~l~~~~~------ 748 (818)
|+||++++++++|++|||+++...... .......|+.+|+|||. ......+.|..
T Consensus 129 p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~e 208 (305)
T cd05609 129 PDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYE 208 (305)
T ss_pred hHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHH
Confidence 899999999999999999998521110 01123568899999992 11122223321
Q ss_pred ---ccCC--CccccceecccCCCc--CccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 749 ---TSDP--HITLTYILDQRISPP--KKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 749 ---~~~~--~~~~~~~~d~~l~~~--~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
...+ .....++........ ...........+.+++..|++.+|++||++.++.+.|+.
T Consensus 209 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 209 FLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1111 111111111111110 000011123446778889999999999998777766665
No 354
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.71 E-value=8e-09 Score=119.93 Aligned_cols=43 Identities=30% Similarity=0.430 Sum_probs=35.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCC----ccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN----RTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~----~~~~~gt~gy~aPE 736 (818)
+.||+||.++..|.+|||-|+-+...... ....+||+-|||||
T Consensus 1362 ~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPE 1408 (1509)
T KOG4645|consen 1362 PANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPE 1408 (1509)
T ss_pred ccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCch
Confidence 89999999999999999999887544211 24578999999999
No 355
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.71 E-value=1.1e-08 Score=107.80 Aligned_cols=42 Identities=26% Similarity=0.326 Sum_probs=34.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++|+++.+|++|||+++....... .....||.+|+|||
T Consensus 130 p~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~g~~~y~aPE 171 (285)
T cd05630 130 PENILLDDHGHIRISDLGLAVHVPEGQT-IKGRVGTVGYMAPE 171 (285)
T ss_pred HHHEEECCCCCEEEeeccceeecCCCcc-ccCCCCCccccChH
Confidence 8999999999999999999987643322 23357999999999
No 356
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.71 E-value=2.7e-08 Score=104.90 Aligned_cols=43 Identities=26% Similarity=0.366 Sum_probs=35.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
++||++++++.+|++|||+++....... ......|+.+|+|||
T Consensus 127 p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 170 (286)
T cd07832 127 PANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPE 170 (286)
T ss_pred HHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCce
Confidence 7899999999999999999987754321 233457899999999
No 357
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.71 E-value=3.3e-08 Score=104.30 Aligned_cols=106 Identities=21% Similarity=0.196 Sum_probs=62.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCCCccc----
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPHITL---- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~~~~---- 756 (818)
++||++|++..+|++|||+++...... .....++..|+||| ...+...+.|.. ...+....
T Consensus 133 ~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 210 (287)
T cd06621 133 PSNILLTRKGQVKLCDFGVSGELVNSL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP 210 (287)
T ss_pred HHHEEEecCCeEEEeeccccccccccc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC
Confidence 789999999999999999987654322 22456888999999 111112222321 11111000
Q ss_pred ---cceec-------ccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 757 ---TYILD-------QRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 757 ---~~~~d-------~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+..+ +.+.... .........+.+++..|++.+|.+||+|.||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 211 LGPIELLSYIVNMPNPELKDEP-GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CChHHHHHHHhcCCchhhccCC-CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 01111 0111000 000112345678888999999999999999987
No 358
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.71 E-value=2.8e-08 Score=104.44 Aligned_cols=43 Identities=30% Similarity=0.308 Sum_probs=34.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++||++++++.+||+|||+++.............++..|+|||
T Consensus 126 ~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE 168 (282)
T cd07829 126 PQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPE 168 (282)
T ss_pred hheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChH
Confidence 8999999999999999999987754433333445678899999
No 359
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.71 E-value=3.4e-08 Score=103.05 Aligned_cols=43 Identities=19% Similarity=0.388 Sum_probs=33.3
Q ss_pred ccccccCCCCcccccccccceeccCCC--CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS--SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~--~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+|++|||+++...... .......|+..|+|||
T Consensus 127 p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE 171 (268)
T cd05086 127 LRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPE 171 (268)
T ss_pred cceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCch
Confidence 899999999999999999987532221 1223456889999999
No 360
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.71 E-value=4.4e-09 Score=111.66 Aligned_cols=34 Identities=15% Similarity=-0.001 Sum_probs=26.1
Q ss_pred Hhhhhhhcccc----CcEEEEEc-CCCcEEEEEeccccc
Q 003465 647 TEDLISDIALE----LDVTAAFT-KHGCLVAEYGSEQGR 680 (818)
Q Consensus 647 t~~f~~~~~ig----g~vy~~~~-~~g~~vAvK~~~~~~ 680 (818)
.++|..-..|| |+||.|.- .+|..+|.|++++..
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~ 178 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE 178 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHH
Confidence 35676667787 99999996 459999999776543
No 361
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.70 E-value=9.3e-09 Score=109.86 Aligned_cols=43 Identities=26% Similarity=0.323 Sum_probs=34.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC-----------CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-----------NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-----------~~~~~~gt~gy~aPE 736 (818)
++||++++++++|++|||+++....... ..+.+.|+..|+|||
T Consensus 143 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 196 (311)
T cd07866 143 AANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPE 196 (311)
T ss_pred HHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChH
Confidence 8999999999999999999987643211 123456889999999
No 362
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.70 E-value=2e-08 Score=108.12 Aligned_cols=40 Identities=33% Similarity=0.442 Sum_probs=32.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++|+++.+|++|||+++..... .....|+..|+|||
T Consensus 136 p~Nili~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~y~aPE 175 (328)
T cd07856 136 PSNILINENCDLKICDFGLARIQDPQ---MTGYVSTRYYRAPE 175 (328)
T ss_pred HHHEeECCCCCEEeCccccccccCCC---cCCCcccccccCce
Confidence 89999999999999999999864322 22346788999999
No 363
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.70 E-value=8.8e-10 Score=104.98 Aligned_cols=107 Identities=21% Similarity=0.234 Sum_probs=65.5
Q ss_pred ccccccCCC---CcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc---------cCCC--cc
Q 003465 694 FNNILLNSE---FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST---------SDPH--IT 755 (818)
Q Consensus 694 ~~NILLd~~---~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~---------~~~~--~~ 755 (818)
|.|+||.+. --+|++|||+|+.+. +...+.+.+||++||||| +.|+. ..+.|+.. ..+. ..
T Consensus 138 P~nllLASK~~~A~vKL~~FGvAi~l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 138 PENLLLASKAKGAAVKLADFGLAIEVN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 216 (355)
T ss_pred hhheeeeeccCCCceeecccceEEEeC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence 899999543 347999999999987 666778889999999999 55544 34455422 1111 11
Q ss_pred ccceecccCCCcCc---cchHHHHHHHHHHHHhccCCCCCCCCChHHHH
Q 003465 756 LTYILDQRISPPKK---QKIVQDIALASIVALACLQSKPKSVPTMQRVS 801 (818)
Q Consensus 756 ~~~~~d~~l~~~~~---~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~ 801 (818)
..++....+.+... +.+..--...-.+..+.+..||.+|-|..|.+
T Consensus 217 ~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL 265 (355)
T KOG0033|consen 217 QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEAL 265 (355)
T ss_pred HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHh
Confidence 22222222222110 01111122333455588899999999988755
No 364
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.70 E-value=1.6e-08 Score=108.33 Aligned_cols=110 Identities=19% Similarity=0.257 Sum_probs=62.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC-----------------------------CccccccccceeCCC----CCCc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-----------------------------NRTLIAGTYRYIAPA----KHPQ 740 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-----------------------------~~~~~~gt~gy~aPE----~~~~ 740 (818)
++||+++.++.+|++|||+++....... ......||..|+||| ...+
T Consensus 131 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~ 210 (316)
T cd05574 131 PENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHG 210 (316)
T ss_pred hHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCC
Confidence 8899999999999999999876532211 012346899999999 1112
Q ss_pred chHHHHhc---------ccCCC--c----cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHc
Q 003465 741 EILSLFSS---------TSDPH--I----TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFL 805 (818)
Q Consensus 741 ~~l~~~~~---------~~~~~--~----~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~ 805 (818)
...+.|.. ...+. . ...++.+....... .......+.++...|++.+|++||++...++++.
T Consensus 211 ~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll 287 (316)
T cd05574 211 SAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPG---SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK 287 (316)
T ss_pred chHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCC---ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence 12223321 11111 0 01112222221111 1113455677788999999999999544444444
Q ss_pred c
Q 003465 806 K 806 (818)
Q Consensus 806 ~ 806 (818)
.
T Consensus 288 ~ 288 (316)
T cd05574 288 Q 288 (316)
T ss_pred c
Confidence 3
No 365
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.70 E-value=4.4e-08 Score=101.32 Aligned_cols=106 Identities=24% Similarity=0.254 Sum_probs=64.9
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCCC----CCcchHHHHh---------cccCCCccc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPAK----HPQEILSLFS---------STSDPHITL-- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE~----~~~~~l~~~~---------~~~~~~~~~-- 756 (818)
|+||++++++.+||+|||.++....... ......++..|+|||. .+....+.|. ....+....
T Consensus 129 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 208 (260)
T cd06606 129 GANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN 208 (260)
T ss_pred HHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 8899999999999999999988755432 1345678999999992 1211222222 111111000
Q ss_pred -----cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 757 -----TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 757 -----~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
..+........ .+......+.+++.+|++.+|.+||++.++++
T Consensus 209 ~~~~~~~~~~~~~~~~---~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 209 PMAALYKIGSSGEPPE---IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred hHHHHHhccccCCCcC---CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 01111011111 12222456677888999999999999999986
No 366
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.70 E-value=8.3e-09 Score=108.41 Aligned_cols=54 Identities=31% Similarity=0.484 Sum_probs=40.3
Q ss_pred ccccccCCC---CcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhc
Q 003465 694 FNNILLNSE---FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSS 748 (818)
Q Consensus 694 ~~NILLd~~---~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~ 748 (818)
|.||||.+. -.+|++|||+||++.+. +-...++||+.|+||| .+.+. .++.|..
T Consensus 692 PENVLLas~~~FPQvKlCDFGfARiIgEk-sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSV 752 (888)
T KOG4236|consen 692 PENVLLASASPFPQVKLCDFGFARIIGEK-SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSV 752 (888)
T ss_pred chheeeccCCCCCceeeccccceeecchh-hhhhhhcCCccccCHHHHhhccccccccceee
Confidence 899999643 36899999999998543 3445689999999999 22222 6777864
No 367
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.70 E-value=1.6e-08 Score=113.05 Aligned_cols=109 Identities=24% Similarity=0.294 Sum_probs=68.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC-----CCCcc----hHHHHhcccC----CCc--cccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA-----KHPQE----ILSLFSSTSD----PHI--TLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE-----~~~~~----~l~~~~~~~~----~~~--~~~~ 758 (818)
-.||||..++++|+.|||+++.++..-.-..+..||+.||||| ..+.. ..+.|+-... .++ .+.+
T Consensus 151 G~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~D 230 (953)
T KOG0587|consen 151 GQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCD 230 (953)
T ss_pred CceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccC
Confidence 5799999999999999999998865544455678999999999 11111 3344542211 000 0111
Q ss_pred e-------ecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 I-------LDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~-------~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+ .-++-.++....+..-.+++.+.+..|+..|-++||+|.+.++
T Consensus 231 mHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 231 MHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred cchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 0111111111224445566777778999999999999988764
No 368
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.69 E-value=1.2e-08 Score=111.77 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=22.0
Q ss_pred ccccccCCCCcccccccccceecc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLN 717 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~ 717 (818)
|+|||+|.++.+||+|||+++.+.
T Consensus 129 p~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 129 PDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred HHHeEECCCCCEEEeecccceecc
Confidence 899999999999999999998653
No 369
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.69 E-value=3.6e-08 Score=106.43 Aligned_cols=43 Identities=30% Similarity=0.386 Sum_probs=34.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC----CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS----NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~----~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++.+..... ......||..|+|||
T Consensus 133 p~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE 179 (332)
T cd07857 133 PGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPE 179 (332)
T ss_pred HHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcH
Confidence 8999999999999999999987643211 123457899999999
No 370
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.69 E-value=2.2e-08 Score=110.57 Aligned_cols=43 Identities=28% Similarity=0.390 Sum_probs=35.4
Q ss_pred ccccccCCCCcccccccccceeccCCCC--CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+++.+..... .....+||++|+|||
T Consensus 213 p~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE 257 (392)
T PHA03207 213 TENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPE 257 (392)
T ss_pred HHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHh
Confidence 8999999999999999999987654322 234567999999999
No 371
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.68 E-value=2.7e-08 Score=90.33 Aligned_cols=58 Identities=22% Similarity=0.248 Sum_probs=42.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC-----CCCcchHHHHhcccC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA-----KHPQEILSLFSSTSD 751 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE-----~~~~~~l~~~~~~~~ 751 (818)
|+|.|++.+++.|++|||+||.+...-...+.-+-|..|-+|. +-....+..|+....
T Consensus 129 pqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagci 191 (292)
T KOG0662|consen 129 PQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191 (292)
T ss_pred cceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchH
Confidence 8999999999999999999998864432233445688898887 222336778876543
No 372
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.68 E-value=2.6e-08 Score=108.08 Aligned_cols=96 Identities=26% Similarity=0.180 Sum_probs=68.3
Q ss_pred cchHHHHHHHhhhhhhcccc----CcEEEEEc-CCCcEEEEEeccccc--cchhhhhHhhh-------------------
Q 003465 638 IAFEEIIRATEDLISDIALE----LDVTAAFT-KHGCLVAEYGSEQGR--SAFFKSFQNEA------------------- 691 (818)
Q Consensus 638 ~~~~~l~~at~~f~~~~~ig----g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~f~~E~------------------- 691 (818)
...+++..++++|.....+| |.||+|.. .+|+.||||+..... ....+.+.+|+
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 44556667778887777777 88999984 578999999664321 11122333443
Q ss_pred --------------------------------------------------------cc---ccccccCCCCccccccccc
Q 003465 692 --------------------------------------------------------HV---FNNILLNSEFEAFFGNFGV 712 (818)
Q Consensus 692 --------------------------------------------------------h~---~~NILLd~~~~~ki~DFGl 712 (818)
|+ ++||++++++.+|++|||+
T Consensus 87 ~~~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~ 166 (345)
T cd07877 87 PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 166 (345)
T ss_pred ecccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccc
Confidence 22 8999999999999999999
Q ss_pred ceeccCCCCCccccccccceeCCC
Q 003465 713 ARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 713 a~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++..... .....||..|+|||
T Consensus 167 ~~~~~~~---~~~~~~~~~y~aPE 187 (345)
T cd07877 167 ARHTDDE---MTGYVATRWYRAPE 187 (345)
T ss_pred ccccccc---ccccccCCCccCHH
Confidence 9865322 23456889999999
No 373
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.68 E-value=7.9e-09 Score=105.02 Aligned_cols=113 Identities=10% Similarity=0.095 Sum_probs=70.3
Q ss_pred ccccccCCCCcccccccccceeccC-CCCCc-cccccccceeCCC-------CCCcc----hHHHHhcccCCCcccccee
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNS-DSSNR-TLIAGTYRYIAPA-------KHPQE----ILSLFSSTSDPHITLTYIL 760 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~-~~~~~-~~~~gt~gy~aPE-------~~~~~----~l~~~~~~~~~~~~~~~~~ 760 (818)
++|.++|+...+|++|=.|+|.+-. +.+.- -.---...||+|| ..+.| .+..|.-.........+ +
T Consensus 424 aRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae-I 502 (563)
T KOG1024|consen 424 ARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE-I 502 (563)
T ss_pred hhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc-c
Confidence 7899999999999999999997633 22110 1111235899999 11222 22223211111110111 1
Q ss_pred ccc------CCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 761 DQR------ISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 761 d~~------l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
||- ..+.....+..|+.+++.|+..||+..|++||+++|++..|.+.
T Consensus 503 DPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 503 DPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred CHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 211 11222233557888899999999999999999999999999865
No 374
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.68 E-value=2.9e-08 Score=104.41 Aligned_cols=41 Identities=29% Similarity=0.291 Sum_probs=32.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++|. +.+||+|||+++.+..... .+...|+..|+|||
T Consensus 128 p~ni~l~~-~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE 168 (282)
T cd07831 128 PENILIKD-DILKLADFGSCRGIYSKPP-YTEYISTRWYRAPE 168 (282)
T ss_pred HHHEEEcC-CCeEEEecccccccccCCC-cCCCCCCcccCChh
Confidence 89999999 9999999999987643322 23346889999999
No 375
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.67 E-value=3.8e-08 Score=106.44 Aligned_cols=43 Identities=30% Similarity=0.291 Sum_probs=33.1
Q ss_pred ccccccCCCCcccccccccceeccCC--------------CCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD--------------SSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~--------------~~~~~~~~gt~gy~aPE 736 (818)
++||+++.++.+|++|||+++..... ....+...++.+|+|||
T Consensus 147 ~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 203 (335)
T PTZ00024 147 PANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPE 203 (335)
T ss_pred HHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCCh
Confidence 78999999999999999999876511 11122345788999999
No 376
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.67 E-value=5.8e-08 Score=109.58 Aligned_cols=112 Identities=20% Similarity=0.190 Sum_probs=76.0
Q ss_pred ccccccCCCCcccccccccceeccCC--CCCc-------cccccccceeCCC------CCCcc-hHHHHhc---------
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD--SSNR-------TLIAGTYRYIAPA------KHPQE-ILSLFSS--------- 748 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~--~~~~-------~~~~gt~gy~aPE------~~~~~-~l~~~~~--------- 748 (818)
.+||||++++.-|+||||=|--.-.. .... -..--|+-|-||| ..|.+ ..+.|+-
T Consensus 174 iENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy 253 (738)
T KOG1989|consen 174 IENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY 253 (738)
T ss_pred hhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH
Confidence 58999999999999999987432111 1100 1122467899999 34444 4555653
Q ss_pred --ccCCCccccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 749 --TSDPHITLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 749 --~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..+++.....|++.....+. ....-..+..|+..|++++|.+||++-+|++.+-++.
T Consensus 254 ~t~PFe~sg~laIlng~Y~~P~---~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 254 FTTPFEESGKLAILNGNYSFPP---FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred hCCCcCcCcceeEEeccccCCC---CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 23333335667777765544 2344555667777999999999999999999998883
No 377
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.66 E-value=1.8e-08 Score=78.19 Aligned_cols=59 Identities=41% Similarity=0.525 Sum_probs=32.6
Q ss_pred CCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCC
Q 003465 102 NLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSN 160 (818)
Q Consensus 102 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~ 160 (818)
+|++|++++|.+....+..|.++++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555554444555555555555555554
No 378
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.66 E-value=4.3e-08 Score=102.23 Aligned_cols=109 Identities=17% Similarity=0.225 Sum_probs=61.8
Q ss_pred ccccccCCCC-cccccccccceeccCCCC----CccccccccceeCCC----CCCcchHHHHhc---------ccCCC--
Q 003465 694 FNNILLNSEF-EAFFGNFGVARLLNSDSS----NRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDPH-- 753 (818)
Q Consensus 694 ~~NILLd~~~-~~ki~DFGla~~~~~~~~----~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~~-- 753 (818)
++||+++.+. .+|++|||+++....... ......||.+|+||| ..+....+.|.. ...+.
T Consensus 131 ~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 210 (268)
T cd06630 131 GANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNA 210 (268)
T ss_pred HHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 7899998876 599999999987653311 123457899999999 111111122221 11111
Q ss_pred cccc---ceeccc-CCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 754 ITLT---YILDQR-ISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 754 ~~~~---~~~d~~-l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.... ..+... ........+......+.+++..|++.+|++||++.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 211 EKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0000 000000 000000112223355677888999999999999999874
No 379
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.65 E-value=2.5e-08 Score=109.21 Aligned_cols=43 Identities=26% Similarity=0.401 Sum_probs=35.7
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
|+|||+++++++||+|||+++.+..... .....+||++|+|||
T Consensus 170 p~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE 213 (371)
T cd05622 170 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 213 (371)
T ss_pred HHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHH
Confidence 8999999999999999999997754322 234567999999999
No 380
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.65 E-value=1.8e-08 Score=106.40 Aligned_cols=113 Identities=19% Similarity=0.191 Sum_probs=67.1
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCCC----C--CcchHHHHhc---------ccCCCc---
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPAK----H--PQEILSLFSS---------TSDPHI--- 754 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE~----~--~~~~l~~~~~---------~~~~~~--- 754 (818)
|+||++++++++|++|||+++.+..... ......|+.+|+|||. . +....+.|.. ...+..
T Consensus 133 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 212 (288)
T cd05583 133 LENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212 (288)
T ss_pred HHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 8999999999999999999987644322 2234568999999992 1 2222223321 111110
Q ss_pred c---ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 755 T---LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 755 ~---~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
. ..++......... +.+......+.+++..|++.+|++||++.+|.+.|+..
T Consensus 213 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 213 EQNSQSEISRRILKSKP-PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ccchHHHHHHHHHccCC-CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 0000000000000 11111223456778899999999999999998888776
No 381
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.64 E-value=1.4e-08 Score=78.83 Aligned_cols=61 Identities=44% Similarity=0.591 Sum_probs=39.0
Q ss_pred CcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCC
Q 003465 125 SKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSL 185 (818)
Q Consensus 125 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l 185 (818)
++|++|++++|+++...+..|.++++|++|++++|.++...|..|..+++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566666766666655445666666666666666666655555666666666666666653
No 382
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.64 E-value=3.3e-08 Score=107.23 Aligned_cols=40 Identities=33% Similarity=0.375 Sum_probs=33.3
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++..... .....|+..|+|||
T Consensus 146 p~Nill~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE 185 (343)
T cd07851 146 PSNIAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPE 185 (343)
T ss_pred HHHeEECCCCCEEEcccccccccccc---ccCCcccccccCHH
Confidence 89999999999999999999865432 23456888999999
No 383
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.62 E-value=2.4e-08 Score=105.52 Aligned_cols=40 Identities=30% Similarity=0.460 Sum_probs=34.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+||+|||+++..... .....|+++|+|||
T Consensus 129 p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE 168 (290)
T cd05580 129 PENLLLDSDGYIKITDFGFAKRVKGR---TYTLCGTPEYLAPE 168 (290)
T ss_pred HHHEEECCCCCEEEeeCCCccccCCC---CCCCCCCccccChh
Confidence 89999999999999999999876443 33457899999999
No 384
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.61 E-value=2.4e-08 Score=99.09 Aligned_cols=43 Identities=23% Similarity=0.402 Sum_probs=37.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
..|.|||.|++.||+||||.|.--.+...+.+.+||+-|+|||
T Consensus 296 LENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPE 338 (516)
T KOG0690|consen 296 LENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPE 338 (516)
T ss_pred hhhheeccCCceEeeecccchhcccccceeccccCChhhcCch
Confidence 4799999999999999999996555556677899999999999
No 385
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.60 E-value=2.2e-08 Score=117.94 Aligned_cols=112 Identities=18% Similarity=0.218 Sum_probs=64.2
Q ss_pred ccccccCCC-----------------CcccccccccceeccCCCCCccccccccceeCCCC-----C-CcchHHHHhcc-
Q 003465 694 FNNILLNSE-----------------FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK-----H-PQEILSLFSST- 749 (818)
Q Consensus 694 ~~NILLd~~-----------------~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~-----~-~~~~l~~~~~~- 749 (818)
|+||||+.+ ..+||+|||+++.+.... ......||+.|+|||. . .+...+.|+..
T Consensus 153 PeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ 231 (1021)
T PTZ00266 153 PQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGC 231 (1021)
T ss_pred HHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHH
Confidence 789999653 458999999998764332 2345679999999991 1 12233445321
Q ss_pred --------cCCCc---cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHH--HHHccC
Q 003465 750 --------SDPHI---TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVS--QEFLKF 807 (818)
Q Consensus 750 --------~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~--~~L~~~ 807 (818)
..+.. ...+++........ .........+.+++..|++.+|++||++.|++ ..+..+
T Consensus 232 ILYELLTGk~PF~~~~~~~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 232 IIYELCSGKTPFHKANNFSQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 11111 11111111000000 00011234566788899999999999999998 445444
No 386
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.60 E-value=2.3e-08 Score=110.26 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=20.5
Q ss_pred ccccccCCCCccccccccccee
Q 003465 694 FNNILLNSEFEAFFGNFGVARL 715 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~ 715 (818)
|+|||+|.++.+||+|||+++.
T Consensus 129 p~NILl~~~g~~kL~DFGla~~ 150 (382)
T cd05625 129 PDNILIDRDGHIKLTDFGLCTG 150 (382)
T ss_pred HHHEEECCCCCEEEeECCCCcc
Confidence 8999999999999999999864
No 387
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.60 E-value=4.5e-08 Score=105.91 Aligned_cols=107 Identities=14% Similarity=0.161 Sum_probs=65.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc--hHHHHhcccC---------C--Ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE--ILSLFSSTSD---------P--HITLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~--~l~~~~~~~~---------~--~~~~~ 757 (818)
..|||||.+|+.||+|||++-.+... ....+.+|++.|.||| ...++ .++.|+.... + ...+.
T Consensus 183 ~eNilL~~~mnikIaDfgfS~~~~~~-~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk 261 (596)
T KOG0586|consen 183 AENILLDENMNIKIADFGFSTFFDYG-LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK 261 (596)
T ss_pred hhhcccccccceeeeccccceeeccc-ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc
Confidence 68999999999999999999988633 3445679999999999 22232 5666754322 1 12222
Q ss_pred ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+.-++.+.+..+ .+.-.-..+-++...-+-.+|.+|+++.++.+
T Consensus 262 ~Lr~rvl~gk~r-Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 262 ELRPRVLRGKYR-IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred cccchheeeeec-ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 222222222210 00000112233444667799999999999874
No 388
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.59 E-value=4.4e-08 Score=107.03 Aligned_cols=23 Identities=26% Similarity=0.427 Sum_probs=21.5
Q ss_pred ccccccCCCCcccccccccceec
Q 003465 694 FNNILLNSEFEAFFGNFGVARLL 716 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~ 716 (818)
|+|||+|.++++||+|||+++.+
T Consensus 129 p~NIli~~~~~vkL~DfG~~~~~ 151 (360)
T cd05627 129 PDNLLLDAKGHVKLSDFGLCTGL 151 (360)
T ss_pred HHHEEECCCCCEEEeeccCCccc
Confidence 89999999999999999999755
No 389
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.59 E-value=4.3e-08 Score=107.83 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=20.7
Q ss_pred ccccccCCCCccccccccccee
Q 003465 694 FNNILLNSEFEAFFGNFGVARL 715 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~ 715 (818)
|+|||++.++++|++|||+++.
T Consensus 129 p~NIll~~~~~~kl~DfGla~~ 150 (377)
T cd05629 129 PDNILIDRGGHIKLSDFGLSTG 150 (377)
T ss_pred HHHEEECCCCCEEEeecccccc
Confidence 8999999999999999999974
No 390
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.58 E-value=4.4e-08 Score=101.69 Aligned_cols=108 Identities=19% Similarity=0.132 Sum_probs=63.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhc---------ccCC--Cccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSS---------TSDP--HITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~---------~~~~--~~~~~~ 758 (818)
|+||++++++.+|++|||+++.... .....|+..|+||| ..+....+.|.. ...+ .....+
T Consensus 125 p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 200 (260)
T cd05611 125 PENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA 200 (260)
T ss_pred HHHeEECCCCcEEEeecccceeccc----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 8999999999999999999986533 23456889999999 212222223321 1111 111111
Q ss_pred eecc----cCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHcc
Q 003465 759 ILDQ----RISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLK 806 (818)
Q Consensus 759 ~~d~----~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~ 806 (818)
+.+. ...... .........+.+++..|++.+|++||++.++.+.|..
T Consensus 201 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 201 VFDNILSRRINWPE-EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred HHHHHHhcccCCCC-cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 1111 111110 1111234567788889999999999988776665543
No 391
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.57 E-value=7.4e-08 Score=104.46 Aligned_cols=40 Identities=33% Similarity=0.346 Sum_probs=33.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++++++.+|++|||+++..... .....|+..|+|||
T Consensus 146 p~Nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE 185 (343)
T cd07880 146 PGNLAVNEDCELKILDFGLARQTDSE---MTGYVVTRWYRAPE 185 (343)
T ss_pred HHHEEEcCCCCEEEeecccccccccC---ccccccCCcccCHH
Confidence 89999999999999999999865432 23446788999999
No 392
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.57 E-value=9.1e-08 Score=102.35 Aligned_cols=103 Identities=18% Similarity=0.221 Sum_probs=60.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCCC------Ccc-hHHHHhcc---------cCC--Ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKH------PQE-ILSLFSST---------SDP--HIT 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~------~~~-~l~~~~~~---------~~~--~~~ 755 (818)
|+||++++++.+|++|||++.... ......|+..|+|||.. ..+ ..+.|+.. ..+ ...
T Consensus 149 p~nili~~~~~~kL~dfg~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~ 224 (313)
T cd06633 149 AGNILLTEPGQVKLADFGSASKSS----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 224 (313)
T ss_pred hhhEEECCCCCEEEeecCCCcccC----CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 899999999999999999986432 12345789999999931 111 22333211 111 100
Q ss_pred -ccc---eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 756 -LTY---ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 756 -~~~---~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
... +......... .......+.+++..|++.+|.+||++.++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 225 AMSALYHIAQNDSPTLQ---SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred hHHHHHHHHhcCCCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0000000000 11112345667779999999999999998853
No 393
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.56 E-value=5.2e-08 Score=107.20 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=20.4
Q ss_pred ccccccCCCCccccccccccee
Q 003465 694 FNNILLNSEFEAFFGNFGVARL 715 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~ 715 (818)
|+|||+|.++.+||+|||+|+.
T Consensus 129 p~Nill~~~~~ikL~DFG~a~~ 150 (376)
T cd05598 129 PDNILIDRDGHIKLTDFGLCTG 150 (376)
T ss_pred HHHEEECCCCCEEEEeCCCCcc
Confidence 8999999999999999999853
No 394
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.56 E-value=9.6e-08 Score=98.40 Aligned_cols=105 Identities=23% Similarity=0.240 Sum_probs=61.6
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHh---------cccCCC--ccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFS---------STSDPH--ITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~---------~~~~~~--~~~~~ 758 (818)
|+||++++++++|++|||+++.............|+.+|+||| ..+....+.|. ....+. ....+
T Consensus 121 p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~ 200 (250)
T cd05123 121 PENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE 200 (250)
T ss_pred cceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 8999999999999999999987654333345567899999999 11211222222 111111 10011
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQR 799 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~ 799 (818)
+.+....... ..+......+.+++..|+..+|++||++.+
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 201 IYEKILKDPL-RFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1111111110 111122345567788999999999999954
No 395
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.56 E-value=1.2e-07 Score=98.40 Aligned_cols=42 Identities=33% Similarity=0.441 Sum_probs=34.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++||+++.++.+|++|||+++...... ......|+..|+|||
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~PE 162 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEYVAPE 162 (262)
T ss_pred HHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCccChh
Confidence 799999999999999999998775432 223457899999999
No 396
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.55 E-value=1e-07 Score=103.29 Aligned_cols=43 Identities=23% Similarity=0.363 Sum_probs=32.1
Q ss_pred ccccccC-CCCcccccccccceeccCCC---CCccccccccceeCCC
Q 003465 694 FNNILLN-SEFEAFFGNFGVARLLNSDS---SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd-~~~~~ki~DFGla~~~~~~~---~~~~~~~gt~gy~aPE 736 (818)
++||+++ ++..+|++|||+++.+.... ...+...|+..|+|||
T Consensus 142 p~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 188 (342)
T cd07854 142 PANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPR 188 (342)
T ss_pred HHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHH
Confidence 8999998 45678999999998764321 1123446888999999
No 397
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.55 E-value=6.1e-08 Score=93.12 Aligned_cols=111 Identities=20% Similarity=0.159 Sum_probs=67.4
Q ss_pred ccccccCCCCcccccccccceeccCC---CC------CccccccccceeCCC----CC---CcchHHHHhcc--------
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD---SS------NRTLIAGTYRYIAPA----KH---PQEILSLFSST-------- 749 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~---~~------~~~~~~gt~gy~aPE----~~---~~~~l~~~~~~-------- 749 (818)
|.|||+.+++.|++.|||-+....-. ++ .+..-.-|..|-||| +. -++..+.|+-.
T Consensus 157 P~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf 236 (302)
T KOG2345|consen 157 PANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMF 236 (302)
T ss_pred cceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHH
Confidence 89999999999999999988755311 11 123344678899999 10 01122234311
Q ss_pred -cC-------CCcc-ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 750 -SD-------PHIT-LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 750 -~~-------~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.. ..++ ...+..+.+..+. ...-.+.+.++..+|++.||.+||+..+++..++..
T Consensus 237 ~~sPfe~~~~~GgSlaLAv~n~q~s~P~---~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 237 GESPFERIYQQGGSLALAVQNAQISIPN---SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred cCCcchHHhhcCCeEEEeeeccccccCC---CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11 1122 1223344443322 111334556677799999999999999999888754
No 398
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.55 E-value=8e-08 Score=99.60 Aligned_cols=107 Identities=16% Similarity=0.112 Sum_probs=61.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC----CC---Ccc------hHHHHhcccCC--Cccc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KH---PQE------ILSLFSSTSDP--HITL-- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~---~~~------~l~~~~~~~~~--~~~~-- 756 (818)
|+||++|+++.+|++|||++....... ......|+..|+||| .. ..| .+..+.....+ ....
T Consensus 128 ~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 206 (258)
T cd05578 128 PDNILLDEQGHVHITDFNIATKVTPDT-LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI 206 (258)
T ss_pred HHHeEEcCCCCEEEeecccccccCCCc-cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH
Confidence 899999999999999999998764332 234466889999999 11 111 11111111111 1110
Q ss_pred cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCCh--HHHH
Q 003465 757 TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTM--QRVS 801 (818)
Q Consensus 757 ~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m--~~V~ 801 (818)
.+.+...........+......+.+++..|++.+|.+||++ +|+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 207 RDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 00000111100001122233566678889999999999999 5543
No 399
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.55 E-value=4.9e-08 Score=111.09 Aligned_cols=43 Identities=26% Similarity=0.366 Sum_probs=36.0
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+++.+..... .....+||..|+|||
T Consensus 295 P~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE 338 (501)
T PHA03210 295 LENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPE 338 (501)
T ss_pred HHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCch
Confidence 8999999999999999999998754322 234567999999999
No 400
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.54 E-value=1.7e-07 Score=100.33 Aligned_cols=43 Identities=9% Similarity=0.150 Sum_probs=33.4
Q ss_pred ccccccCCCCcccccccccceeccCCCC-------CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-------NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-------~~~~~~gt~gy~aPE 736 (818)
++||+++.++.+|++|||.+..+..... ......++.+|+|||
T Consensus 129 ~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 178 (314)
T cd08216 129 ASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPE 178 (314)
T ss_pred cceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHH
Confidence 8999999999999999999876532211 123456888999999
No 401
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.54 E-value=1.4e-07 Score=97.86 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=63.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcchHHHHhcc-----------cCCCccccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQEILSLFSST-----------SDPHITLTY 758 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~~l~~~~~~-----------~~~~~~~~~ 758 (818)
++||+++++ .+|++|||+++.............|+..|+|||. .+....+.|... .+......+
T Consensus 134 ~~nili~~~-~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~ 212 (260)
T cd08222 134 AKNIFLKNN-LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212 (260)
T ss_pred hhheEeecC-CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 899999864 5999999999887544333345678999999991 111122233211 111111111
Q ss_pred eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 759 ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 759 ~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.......+.....+......+.+++.+|++.+|++||++.++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 213 VVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11111111110112233446677888999999999999999875
No 402
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.54 E-value=6.6e-08 Score=101.46 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=61.3
Q ss_pred ccccccCCCCcccccccccceeccCCCC--------------------CccccccccceeCCC----CCCcchHHHHhc-
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--------------------NRTLIAGTYRYIAPA----KHPQEILSLFSS- 748 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--------------------~~~~~~gt~gy~aPE----~~~~~~l~~~~~- 748 (818)
++||++++++.+|++|||+++....... ......|+.+|+||| ..+....+.|..
T Consensus 130 ~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG 209 (280)
T cd05581 130 PENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALG 209 (280)
T ss_pred HHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHH
Confidence 7899999999999999999987643221 123456889999999 222222223321
Q ss_pred --------ccCCCcccc--ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCCh----HHHHH
Q 003465 749 --------TSDPHITLT--YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTM----QRVSQ 802 (818)
Q Consensus 749 --------~~~~~~~~~--~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m----~~V~~ 802 (818)
...+..... ..+........ ..+......+.+++..|++.+|.+||++ .++++
T Consensus 210 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 210 CIIYQMLTGKPPFRGSNEYLTFQKILKLEY-SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHHhCCCCCCCccHHHHHHHHHhcCC-CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111110000 00000000000 0111223456778889999999999999 66653
No 403
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.54 E-value=1.1e-07 Score=99.79 Aligned_cols=108 Identities=18% Similarity=0.099 Sum_probs=61.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC----CCcc-hHHHHhcc---------cCCCcc----
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK----HPQE-ILSLFSST---------SDPHIT---- 755 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~----~~~~-~l~~~~~~---------~~~~~~---- 755 (818)
|+|||+|+++.+|++|||+++..... ......||.+|+|||. ...+ ..+.|+.. ..+...
T Consensus 125 p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 202 (279)
T cd05633 125 PANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 202 (279)
T ss_pred HHHEEECCCCCEEEccCCcceecccc--CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc
Confidence 89999999999999999999865332 2233469999999992 1111 22333311 111100
Q ss_pred ccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHHH
Q 003465 756 LTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQE 803 (818)
Q Consensus 756 ~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~~ 803 (818)
....++..........+......+.++...|++.+|++|| +++|+++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 203 DKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 0000110000000001112233455677799999999999 58888764
No 404
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.54 E-value=8.8e-08 Score=101.25 Aligned_cols=43 Identities=30% Similarity=0.570 Sum_probs=34.9
Q ss_pred ccccccCCCCcccccccccceeccCCC-CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS-SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~-~~~~~~~gt~gy~aPE 736 (818)
|+|||+++++++||+|||+++...... .......|+..|+|||
T Consensus 133 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 176 (290)
T cd05613 133 LENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPD 176 (290)
T ss_pred HHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChh
Confidence 899999999999999999998764432 2223466899999999
No 405
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.51 E-value=1.1e-07 Score=102.64 Aligned_cols=43 Identities=28% Similarity=0.445 Sum_probs=35.2
Q ss_pred ccccccCCCCcccccccccceeccCCCC-CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-~~~~~~gt~gy~aPE 736 (818)
|+|||+|.++.+||+|||+++.+..... .....+||++|+|||
T Consensus 130 p~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE 173 (332)
T cd05623 130 PDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 173 (332)
T ss_pred HHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHH
Confidence 8999999999999999999987644332 233467999999999
No 406
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.51 E-value=1.5e-07 Score=101.59 Aligned_cols=43 Identities=28% Similarity=0.429 Sum_probs=34.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE 736 (818)
|+|||++.++++||+|||+++.+...... .....||++|+|||
T Consensus 130 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE 173 (331)
T cd05597 130 PDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPE 173 (331)
T ss_pred HHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHH
Confidence 89999999999999999999876543322 23456999999999
No 407
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.50 E-value=6e-08 Score=90.49 Aligned_cols=42 Identities=31% Similarity=0.464 Sum_probs=35.4
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||+|.++.+||+|||++..+.++ -..|..+|.-.|||||
T Consensus 177 PsNiLIn~~GqVKiCDFGIsG~L~dS-iAkt~daGCkpYmaPE 218 (282)
T KOG0984|consen 177 PSNILINYDGQVKICDFGISGYLVDS-IAKTMDAGCKPYMAPE 218 (282)
T ss_pred cceEEEccCCcEEEcccccceeehhh-hHHHHhcCCCccCChh
Confidence 99999999999999999999987543 3334467888999999
No 408
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.49 E-value=2.2e-08 Score=95.92 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=34.9
Q ss_pred ccccccCCCCcccccccccceeccCCCC----CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS----NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~----~~~~~~gt~gy~aPE 736 (818)
+.|||++.++..|+||||+||.+..... ..|.-+-|..|.+||
T Consensus 152 aaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppE 198 (376)
T KOG0669|consen 152 AANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPE 198 (376)
T ss_pred HhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHH
Confidence 7899999999999999999998854322 124455689999999
No 409
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.49 E-value=5.1e-08 Score=105.14 Aligned_cols=43 Identities=28% Similarity=0.462 Sum_probs=35.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE 736 (818)
|+|||+|.++.+||+|||+++........ .....||++|+|||
T Consensus 130 p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE 173 (331)
T cd05624 130 PDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPE 173 (331)
T ss_pred hHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHH
Confidence 89999999999999999999877544322 23467999999999
No 410
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.48 E-value=2.3e-07 Score=97.33 Aligned_cols=107 Identities=18% Similarity=0.097 Sum_probs=61.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---C-C-cchHHHHhc---------ccCCCccc---
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---H-P-QEILSLFSS---------TSDPHITL--- 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~-~-~~~l~~~~~---------~~~~~~~~--- 756 (818)
|+||++++++.+|++|||+++..... ......|+..|+|||. . . +...+.|+. ...+....
T Consensus 125 p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~ 202 (278)
T cd05606 125 PANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 202 (278)
T ss_pred HHHEEECCCCCEEEccCcCccccCcc--CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc
Confidence 89999999999999999999865322 2223569999999991 1 1 111223321 11111100
Q ss_pred -cceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCC-----ChHHHHH
Q 003465 757 -TYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVP-----TMQRVSQ 802 (818)
Q Consensus 757 -~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP-----~m~~V~~ 802 (818)
...++..........+......+.++...|++.+|.+|| ++.++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 203 DKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred chHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 000111110000011112234566777899999999999 8888874
No 411
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.46 E-value=2.2e-07 Score=96.72 Aligned_cols=43 Identities=23% Similarity=0.384 Sum_probs=34.2
Q ss_pred ccccccCCCCcccccccccceeccCC---CCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD---SSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~---~~~~~~~~gt~gy~aPE 736 (818)
|+||++|+++.+||+|||+++..... ....+...|+..|+|||
T Consensus 134 p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE 179 (264)
T cd06653 134 GANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPE 179 (264)
T ss_pred HHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHh
Confidence 89999999999999999999866321 11223466899999999
No 412
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.43 E-value=6.3e-07 Score=96.55 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 775 DIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 775 ~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
....+.+++..|++.+|++|||+.||++
T Consensus 280 ~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 280 FSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 3456788999999999999999999974
No 413
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.41 E-value=4.1e-07 Score=95.40 Aligned_cols=42 Identities=29% Similarity=0.351 Sum_probs=33.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++||++++++.+|++|||+++...... ......|+..|+|||
T Consensus 123 p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~y~~PE 164 (277)
T cd05577 123 PENVLLDDHGNVRISDLGLAVELKGGK-KIKGRAGTPGYMAPE 164 (277)
T ss_pred HHHEEECCCCCEEEccCcchhhhccCC-ccccccCCCCcCCHH
Confidence 899999999999999999998764422 223456888999999
No 414
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.41 E-value=2.4e-07 Score=89.79 Aligned_cols=107 Identities=12% Similarity=0.081 Sum_probs=64.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcc---------cCCCc---ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSST---------SDPHI---TLT 757 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~---------~~~~~---~~~ 757 (818)
|+|||+++++.+|+ ||+++...... ..||++||||| ..+.+ ..+.|+.. ..+.. ...
T Consensus 39 p~Nil~~~~~~~~~--fG~~~~~~~~~-----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~ 111 (176)
T smart00750 39 SGNILLTWDGLLKL--DGSVAFKTPEQ-----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS 111 (176)
T ss_pred cccEeEcCccceee--ccceEeecccc-----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc
Confidence 78999999999999 99998764432 26899999999 22221 23334311 11111 001
Q ss_pred ----ceecccCCC--cCccchHHHH--HHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 758 ----YILDQRISP--PKKQKIVQDI--ALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 758 ----~~~d~~l~~--~~~~~~~~~~--~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
.++...... .......... ..+.+++.+|++.+|++||++.|+++.+..+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 112 AILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 111110100 0000111111 2478899999999999999999999988654
No 415
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.40 E-value=4.1e-07 Score=97.95 Aligned_cols=43 Identities=7% Similarity=0.176 Sum_probs=30.8
Q ss_pred ccccccCCCCcccccccccceeccCCCC-------CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS-------NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~-------~~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+|++|||.+........ ......++..|+|||
T Consensus 129 p~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE 178 (327)
T cd08227 129 ASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPE 178 (327)
T ss_pred hhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChH
Confidence 8999999999999999987654321110 112235778899999
No 416
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.38 E-value=7.1e-07 Score=99.77 Aligned_cols=43 Identities=19% Similarity=0.127 Sum_probs=33.2
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE 736 (818)
|+|||++.++.+||+|||+++....+... .....+|++|+|||
T Consensus 337 p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 337 PENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred hHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 89999999999999999999866443221 22234578999999
No 417
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.37 E-value=2.6e-07 Score=100.53 Aligned_cols=43 Identities=30% Similarity=0.451 Sum_probs=34.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
-.|||+.+.+.+|++|||.+..+...-.......||+.|||||
T Consensus 140 Ganilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapE 182 (829)
T KOG0576|consen 140 GANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPE 182 (829)
T ss_pred ccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchh
Confidence 4699999999999999999876543222233567999999999
No 418
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.36 E-value=8.4e-07 Score=92.48 Aligned_cols=104 Identities=14% Similarity=0.210 Sum_probs=60.4
Q ss_pred ccccccCCCC-cccccccccceeccCCCCCccccccccceeCCC---CCC-cchHHHHhcc---------cCCCcc-ccc
Q 003465 694 FNNILLNSEF-EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHP-QEILSLFSST---------SDPHIT-LTY 758 (818)
Q Consensus 694 ~~NILLd~~~-~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~-~~~l~~~~~~---------~~~~~~-~~~ 758 (818)
|+||+++.++ .+||+|||+++..... ....|+.+|+||| ..+ ....+.|+.. ..+... ..+
T Consensus 137 p~nil~~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 212 (267)
T PHA03390 137 LENVLYDRAKDRIYLCDYGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE 212 (267)
T ss_pred HHHEEEeCCCCeEEEecCccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 8999999999 9999999999876432 2346899999999 112 1123334321 111100 000
Q ss_pred ee-----cccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCC-hHHHHH
Q 003465 759 IL-----DQRISPPKKQKIVQDIALASIVALACLQSKPKSVPT-MQRVSQ 802 (818)
Q Consensus 759 ~~-----d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~-m~~V~~ 802 (818)
.+ ........ .........+.++...|++.+|++||+ +.++++
T Consensus 213 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 213 ELDLESLLKRQQKKL-PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred hhhHHHHHHhhcccC-CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 01111110 111123345566777999999999996 688764
No 419
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.32 E-value=1.3e-08 Score=111.18 Aligned_cols=179 Identities=30% Similarity=0.260 Sum_probs=104.5
Q ss_pred CccccCCCCCcEEEccccccCCcCCcccCCC-CCCCEEEccCCcCC----------CCCchhhcCCCCCCeeeccCCcCC
Q 003465 262 PQEIGYLENLVYLSLNVNNLTGPIPSTLGRL-TSLSDLDLSHNSLF----------GPIPPTLSHLTRLTTLKLFSNQIN 330 (818)
Q Consensus 262 ~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~Ls~n~l~----------~~~~~~l~~l~~L~~L~L~~n~l~ 330 (818)
|-.+..+.+|+.|.+.++.+... ..+..+ ..|++| |.+|.+. |.+..++ ....|...+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~L-IC~~Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKL-ICHNSLDALRHVFASCGGDISNSP-VWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhh-hhhccHHHHHHHHHHhccccccch-hhhhHhhhhcchhhHH
Confidence 55677788999999999887631 111111 233333 2222221 1111111 1234556666666665
Q ss_pred CCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCCcCcccCCcccc
Q 003465 331 GSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSNKLNGSIPSELM 410 (818)
Q Consensus 331 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 410 (818)
.+..++.-++.|+.|+|++|++... ..+..++.|++|||++|.+....--....+ .|+.|.+++|.++.. ..+.
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhh--hhHH
Confidence 3444556667777777777777643 256677777777777777763322222233 377778888777633 3466
Q ss_pred CCCCCCEEecccCcCcccC-CccccCCCCCCEEECcCCcCC
Q 003465 411 NCFSLQSLILSNNSLTGRI-PSEIRNLSYLHELDLSLNFIS 450 (818)
Q Consensus 411 ~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~ 450 (818)
++.+|+.||+++|-+.+.- -..++.+..|+.|+|.+|++-
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7777888888888776421 122455667777778887764
No 420
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.29 E-value=1.1e-06 Score=89.79 Aligned_cols=101 Identities=16% Similarity=-0.041 Sum_probs=57.0
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCCC---C-CcchHHHHhcccC---------CCcccccee
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAK---H-PQEILSLFSSTSD---------PHITLTYIL 760 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~---~-~~~~l~~~~~~~~---------~~~~~~~~~ 760 (818)
|+||+++++..+|++|||+++.+... .....++..|+|||. . ++...+.|..... +.......+
T Consensus 113 p~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~ 189 (237)
T cd05576 113 PNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI 189 (237)
T ss_pred HHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc
Confidence 89999999999999999988765432 223456778999992 1 1222333432110 000000000
Q ss_pred cccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHH
Q 003465 761 DQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRV 800 (818)
Q Consensus 761 d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V 800 (818)
........ +......+..+...|++.||++||++.++
T Consensus 190 ~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 190 NTHTTLNI---PEWVSEEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred ccccccCC---cccCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence 00000001 11122345567779999999999997443
No 421
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.29 E-value=4.2e-07 Score=90.07 Aligned_cols=54 Identities=24% Similarity=0.367 Sum_probs=41.2
Q ss_pred ccccccCCC----CcccccccccceeccCCCC---CccccccccceeCCC-----CCCcchHHHHh
Q 003465 694 FNNILLNSE----FEAFFGNFGVARLLNSDSS---NRTLIAGTYRYIAPA-----KHPQEILSLFS 747 (818)
Q Consensus 694 ~~NILLd~~----~~~ki~DFGla~~~~~~~~---~~~~~~gt~gy~aPE-----~~~~~~l~~~~ 747 (818)
|.|||+-.+ +.+||+|||+||++...-. ....|+-|+-|-||| +..+..++.|+
T Consensus 160 PaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWA 225 (438)
T KOG0666|consen 160 PANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWA 225 (438)
T ss_pred cceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHH
Confidence 899999888 9999999999998864311 234678899999999 44444556664
No 422
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.23 E-value=1.8e-06 Score=85.71 Aligned_cols=89 Identities=28% Similarity=0.383 Sum_probs=61.8
Q ss_pred ccccccCC-CCcccccccccceeccCCCCCccccccccceeCCCCCC-----cchHHHHhcccCCCccccceecccCCCc
Q 003465 694 FNNILLNS-EFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPAKHP-----QEILSLFSSTSDPHITLTYILDQRISPP 767 (818)
Q Consensus 694 ~~NILLd~-~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE~~~-----~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 767 (818)
+.||+++. +..++++|||.++.............+..+|++||... ....+.|....
T Consensus 120 ~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~----------------- 182 (215)
T cd00180 120 PENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGV----------------- 182 (215)
T ss_pred HhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHH-----------------
Confidence 89999999 89999999999987754432234456888999998321 11122222110
Q ss_pred CccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 768 KKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 768 ~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
..-++..+.+++..|++.+|.+||++.++++.
T Consensus 183 ----~~~~l~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 183 ----ILYELPELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 11112567788889999999999999999864
No 423
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.23 E-value=1.3e-08 Score=111.06 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=13.8
Q ss_pred CcCCCCCCcEEEcCCCCCc
Q 003465 96 NFSCFPNLESFRIWYSNIS 114 (818)
Q Consensus 96 ~l~~l~~L~~L~L~~n~~~ 114 (818)
++..+..|++|.|.++++.
T Consensus 104 ~ifpF~sLr~LElrg~~L~ 122 (1096)
T KOG1859|consen 104 SIFPFRSLRVLELRGCDLS 122 (1096)
T ss_pred eeccccceeeEEecCcchh
Confidence 3667777888888877764
No 424
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.20 E-value=1.1e-06 Score=94.08 Aligned_cols=43 Identities=21% Similarity=0.222 Sum_probs=35.5
Q ss_pred ccccccCCCCcccccccccceeccCCCC--------CccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSS--------NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~--------~~~~~~gt~gy~aPE 736 (818)
|+|||+|.++.+||+|||+|+.+...+. ..+.+.|++.|+|||
T Consensus 140 P~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe 190 (365)
T PRK09188 140 PQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPD 190 (365)
T ss_pred cceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcc
Confidence 7899999999999999999998754421 114678999999999
No 425
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.18 E-value=5.4e-07 Score=93.09 Aligned_cols=43 Identities=35% Similarity=0.508 Sum_probs=36.1
Q ss_pred ccccccCC---CCcccccccccceeccCCCC-------CccccccccceeCCC
Q 003465 694 FNNILLNS---EFEAFFGNFGVARLLNSDSS-------NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~---~~~~ki~DFGla~~~~~~~~-------~~~~~~gt~gy~aPE 736 (818)
|.||||.+ -++.||+||||+|+++.++. -++..+||+.|++||
T Consensus 598 PgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPE 650 (775)
T KOG1151|consen 598 PGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPE 650 (775)
T ss_pred CccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcc
Confidence 89999954 57899999999999976543 246789999999999
No 426
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.17 E-value=1e-06 Score=106.44 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=22.1
Q ss_pred HHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 777 ALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 777 ~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.....++..|++.+|.+||+|.||++
T Consensus 239 ~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 239 PKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHHHhCCCChhhCcChHHHhh
Confidence 34567778999999999999999975
No 427
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.17 E-value=9.5e-07 Score=96.01 Aligned_cols=106 Identities=18% Similarity=0.247 Sum_probs=62.4
Q ss_pred ccccccCC-CCcccccccccceeccCCCCCccccccccceeCCC--CCCcc-hHHHH---------hcccCCC---cccc
Q 003465 694 FNNILLNS-EFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA--KHPQE-ILSLF---------SSTSDPH---ITLT 757 (818)
Q Consensus 694 ~~NILLd~-~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE--~~~~~-~l~~~---------~~~~~~~---~~~~ 757 (818)
..||++.. -+.+||+|.|||.++.... ...+.||+-+|||| ...++ .++.+ +-..++. ....
T Consensus 173 CDNIFinG~~G~VKIGDLGLAtl~r~s~--aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 173 CDNIFVNGNLGEVKIGDLGLATLLRKSH--AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred cceEEEcCCcCceeecchhHHHHhhccc--cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 68999965 6799999999999875432 23488999999999 22222 12222 1122221 2233
Q ss_pred ceecccCCCcCcc-chHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 758 YILDQRISPPKKQ-KIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 758 ~~~d~~l~~~~~~-~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
+|..+...+..+. ...-.-..+-+++-.|+.. .++||+..|.++
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 3333333332200 0000112344566699999 999999999874
No 428
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.15 E-value=4.2e-07 Score=89.54 Aligned_cols=62 Identities=18% Similarity=0.166 Sum_probs=26.0
Q ss_pred CCCCEEEcCCCcccccC-CcCcCCCCCCCEEeccCCcCCCC-CCcccCCCCCCCEEEccCCcCc
Q 003465 341 ENLERVDMSSNKLEGPI-PLTIGDLTNLIYLDLSLNQLSGP-IPSTFGHLTLLKFLNLNSNKLN 402 (818)
Q Consensus 341 ~~L~~L~Ls~n~l~~~~-~~~l~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~ 402 (818)
+++..+.+..|.+...- ......+|.+..|+|+.|+|... --+.+..+++|..|.+++|.+.
T Consensus 199 pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 199 PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 34445555555443211 11233344444555555554321 0122344444444555444443
No 429
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.15 E-value=1.5e-08 Score=99.45 Aligned_cols=176 Identities=20% Similarity=0.164 Sum_probs=79.2
Q ss_pred CCEEEccCCCCCCC-CccCCCCCCCCcEEEcccCcCCccCCccccCCCCCCEEEccCCc-CCC-CCCCCCCCCCcceEEE
Q 003465 175 LSILDLSSNSLVGP-IPFTLGHLTQLTTLKLFSNQINGCIPLDFGNLRHLKEVDLSGNK-LNG-PIASTIGDLTNLNSLD 251 (818)
Q Consensus 175 L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~-l~~-~~~~~l~~l~~L~~L~ 251 (818)
|++|||++..++.. +...++.+.+|+.|.+.++++...+...+++-.+|+.|+++.+. ++. ...-.+.+++.|..|+
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LN 266 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELN 266 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcC
Confidence 44445444444311 11123344445555555555444444444444555555554432 110 0011233445555555
Q ss_pred ccCCCCCCCCCccc-cC-CCCCcEEEccccccC---CcCCcccCCCCCCCEEEccCCcC-CCCCchhhcCCCCCCeeecc
Q 003465 252 LSSKQLSGPLPQEI-GY-LENLVYLSLNVNNLT---GPIPSTLGRLTSLSDLDLSHNSL-FGPIPPTLSHLTRLTTLKLF 325 (818)
Q Consensus 252 L~~n~l~~~~~~~l-~~-l~~L~~L~L~~n~l~---~~~~~~l~~l~~L~~L~Ls~n~l-~~~~~~~l~~l~~L~~L~L~ 325 (818)
++++.+.......+ .. -++|+.|+|+++.-. ..+..-...+++|.+|||++|.. +......|.+++.|++|.++
T Consensus 267 lsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSls 346 (419)
T KOG2120|consen 267 LSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLS 346 (419)
T ss_pred chHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehh
Confidence 55554432211111 00 234555555554211 01111224566677777766542 22222344566677777776
Q ss_pred CCcCCCCcCc---cccCCCCCCEEEcCCCc
Q 003465 326 SNQINGSIPL---GIGNLENLERVDMSSNK 352 (818)
Q Consensus 326 ~n~l~~~~~~---~l~~l~~L~~L~Ls~n~ 352 (818)
.|.. .+|. .+...|+|.+|++.++-
T Consensus 347 RCY~--i~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 347 RCYD--IIPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred hhcC--CChHHeeeeccCcceEEEEecccc
Confidence 6642 2333 24566777777776653
No 430
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=98.12 E-value=1.3e-06 Score=100.66 Aligned_cols=43 Identities=26% Similarity=0.462 Sum_probs=36.8
Q ss_pred ccccccCCCCcccccccccceeccCCCCC-ccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSN-RTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~-~~~~~gt~gy~aPE 736 (818)
|.|||||..|+.|+||||-+-.+..++.. ....+||+-|++||
T Consensus 203 PDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPE 246 (1317)
T KOG0612|consen 203 PDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPE 246 (1317)
T ss_pred cceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHH
Confidence 99999999999999999988766655443 45678999999999
No 431
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.11 E-value=8.7e-07 Score=88.37 Aligned_cols=55 Identities=20% Similarity=0.363 Sum_probs=44.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC--C-CCcc-hHHHHhc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA--K-HPQE-ILSLFSS 748 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE--~-~~~~-~l~~~~~ 748 (818)
..|||||.+++.|++|||+.|.--.+...+++.+||+.|+||| | ..+. .+.+|+-
T Consensus 379 ldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwal 437 (593)
T KOG0695|consen 379 LDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWAL 437 (593)
T ss_pred ccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHH
Confidence 5799999999999999999997656666778899999999999 2 1112 5667753
No 432
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.11 E-value=3.9e-06 Score=88.57 Aligned_cols=103 Identities=17% Similarity=0.222 Sum_probs=64.4
Q ss_pred cccccc-CCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc--hHHHHh-----------cccCCCc--
Q 003465 694 FNNILL-NSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE--ILSLFS-----------STSDPHI-- 754 (818)
Q Consensus 694 ~~NILL-d~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~--~l~~~~-----------~~~~~~~-- 754 (818)
|.||.. ..-+-+|++|||++--+..+.. -++.+|+..|-||| ...+| .++.|. +..+++.
T Consensus 146 PENVVFFEKlGlVKLTDFGFSNkf~PG~k-L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND 224 (864)
T KOG4717|consen 146 PENVVFFEKLGLVKLTDFGFSNKFQPGKK-LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND 224 (864)
T ss_pred cceeEEeeecCceEeeeccccccCCCcch-hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc
Confidence 788654 6677899999999987765543 34578999999999 22222 334443 2222221
Q ss_pred --cccceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 755 --TLTYILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 755 --~~~~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+.-|+|-+..- +...-.++-.++-..+..||++|-+..|++.
T Consensus 225 SETLTmImDCKYtv-----PshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 225 SETLTMIMDCKYTV-----PSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhhhhhhhcccccC-----chhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 223334433321 2222233445666888999999999999884
No 433
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.08 E-value=1.7e-07 Score=91.04 Aligned_cols=138 Identities=22% Similarity=0.205 Sum_probs=60.4
Q ss_pred cCCCCCCCEEEccCCCCCCCCccC----CCCCCCCcEEEcccCcCCccCCcc-------------ccCCCCCCEEEccCC
Q 003465 169 LGHLTRLSILDLSSNSLVGPIPFT----LGHLTQLTTLKLFSNQINGCIPLD-------------FGNLRHLKEVDLSGN 231 (818)
Q Consensus 169 l~~l~~L~~L~L~~n~l~~~~~~~----l~~l~~L~~L~L~~n~l~~~~~~~-------------l~~l~~L~~L~l~~n 231 (818)
+.++++|+..+||+|.+....|.. +++-+.|.+|.+++|.+.-..... ..+-+.|+++....|
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 334455555555555544333322 234455555555555443111111 123355666666666
Q ss_pred cCCCCCC----CCCCCCCcceEEEccCCCCCCCC-----CccccCCCCCcEEEccccccCCc----CCcccCCCCCCCEE
Q 003465 232 KLNGPIA----STIGDLTNLNSLDLSSKQLSGPL-----PQEIGYLENLVYLSLNVNNLTGP----IPSTLGRLTSLSDL 298 (818)
Q Consensus 232 ~l~~~~~----~~l~~l~~L~~L~L~~n~l~~~~-----~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L 298 (818)
++..-.. ..+..-..|+.+.+..|.|.... ...+.++.+|+.|+|..|.++.. +...+...+.|+.|
T Consensus 168 Rlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL 247 (388)
T COG5238 168 RLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLREL 247 (388)
T ss_pred hhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhc
Confidence 6542110 11222245566666666544210 01123455566666666655422 11222333445555
Q ss_pred EccCCcCC
Q 003465 299 DLSHNSLF 306 (818)
Q Consensus 299 ~Ls~n~l~ 306 (818)
.+.+|-++
T Consensus 248 ~lnDClls 255 (388)
T COG5238 248 RLNDCLLS 255 (388)
T ss_pred cccchhhc
Confidence 55555443
No 434
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.05 E-value=6.2e-07 Score=87.03 Aligned_cols=57 Identities=26% Similarity=0.283 Sum_probs=44.1
Q ss_pred ccccccCCCCcccccccccceeccCC-CCCccccccccceeCCC-----CCCcchHHHHhccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD-SSNRTLIAGTYRYIAPA-----KHPQEILSLFSSTS 750 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~-~~~~~~~~gt~gy~aPE-----~~~~~~l~~~~~~~ 750 (818)
|.|.|++++...||+||||||.-+.+ ...+|.-+-|-.|-||| |+.+..++.|+...
T Consensus 184 PGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGC 246 (449)
T KOG0664|consen 184 PGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGC 246 (449)
T ss_pred CccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhH
Confidence 89999999999999999999976544 33456666788999999 44444566676543
No 435
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.05 E-value=3.2e-06 Score=92.36 Aligned_cols=104 Identities=20% Similarity=0.146 Sum_probs=64.9
Q ss_pred cccccc-CCCCcccccccccceeccCCCCCccccccccceeCCC----CCCcchHHHHhcccC-----------CCcccc
Q 003465 694 FNNILL-NSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQEILSLFSSTSD-----------PHITLT 757 (818)
Q Consensus 694 ~~NILL-d~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~~l~~~~~~~~-----------~~~~~~ 757 (818)
|+|||+ ++.++.|++|||.++.+..+ ..+.+-|..|.||| ..++..-++|.-... ....-.
T Consensus 443 p~NIL~~~~~g~lrltyFG~a~~~~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 443 PGNILLDGSAGHLRLTYFGFWSELERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred hhheeecCCCCcEEEEEechhhhCchh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 999999 69999999999999987655 22357788999999 223335556653221 111011
Q ss_pred ceecccC-CCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 758 YILDQRI-SPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 758 ~~~d~~l-~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
..+-.++ .++......+++. ++.-.|++.+|.+||+|.++...
T Consensus 520 ~ei~~~i~~~~~s~~vS~~AK---dLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 520 IEIHTRIQMPKFSECVSDEAK---DLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HHHHHhhcCCccccccCHHHH---HHHHHhccCChhhCcChhhhccC
Confidence 1122222 2222111223333 45559999999999999998753
No 436
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.99 E-value=9.8e-08 Score=93.92 Aligned_cols=156 Identities=21% Similarity=0.161 Sum_probs=69.5
Q ss_pred CCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCc-CCCC-cCccccCCCCCCEEEcCCCcccccCCcCc--CCCC
Q 003465 290 GRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQ-INGS-IPLGIGNLENLERVDMSSNKLEGPIPLTI--GDLT 365 (818)
Q Consensus 290 ~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~-~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l--~~l~ 365 (818)
..|.+|+.|.|.++++.+.+...+.+..+|+.|+|+.+. ++.. ...-+.+|+.|..|+++-|.+.......+ .--+
T Consensus 207 s~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise 286 (419)
T KOG2120|consen 207 SQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISE 286 (419)
T ss_pred HHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhch
Confidence 344555555555555554444445555555555555432 1110 00113445555555555554432211100 0013
Q ss_pred CCCEEeccCCcCC---CCCCcccCCCCCCCEEEccCCc-CcccCCccccCCCCCCEEecccCcCcccCCcc---ccCCCC
Q 003465 366 NLIYLDLSLNQLS---GPIPSTFGHLTLLKFLNLNSNK-LNGSIPSELMNCFSLQSLILSNNSLTGRIPSE---IRNLSY 438 (818)
Q Consensus 366 ~L~~L~Ls~n~l~---~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~---l~~l~~ 438 (818)
+|+.|+|+++.-. ..+......+++|..|||++|. ++...-..|..++.|++|.++.|.. .+|.. +...|+
T Consensus 287 ~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~ps 364 (419)
T KOG2120|consen 287 TLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPS 364 (419)
T ss_pred hhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcc
Confidence 4555555554211 0111122445666666666553 2222223445556666666666653 23332 345566
Q ss_pred CCEEECcCC
Q 003465 439 LHELDLSLN 447 (818)
Q Consensus 439 L~~L~Ls~N 447 (818)
|.+||+-++
T Consensus 365 l~yLdv~g~ 373 (419)
T KOG2120|consen 365 LVYLDVFGC 373 (419)
T ss_pred eEEEEeccc
Confidence 666666554
No 437
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.99 E-value=1e-06 Score=86.88 Aligned_cols=63 Identities=17% Similarity=0.104 Sum_probs=30.4
Q ss_pred CCCEEEccCCcCcccC-CccccCCCCCCEEecccCcCcc-cCCccccCCCCCCEEECcCCcCCcc
Q 003465 390 LLKFLNLNSNKLNGSI-PSELMNCFSLQSLILSNNSLTG-RIPSEIRNLSYLHELDLSLNFISGM 452 (818)
Q Consensus 390 ~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~ 452 (818)
++..+.+..|.+...- ...+..++.+-.|+|+.|+|.. ..-+.+..++.|..|.+++|++.+.
T Consensus 200 nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~ 264 (418)
T KOG2982|consen 200 NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDP 264 (418)
T ss_pred cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccccc
Confidence 4444444444443211 1123334455556666666532 1223455666666666666666543
No 438
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=97.96 E-value=1.4e-05 Score=87.75 Aligned_cols=40 Identities=23% Similarity=0.178 Sum_probs=28.9
Q ss_pred ccccccCCCC--cccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEF--EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~--~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||||-+-. .+||.|||.|-.....-. .-.-+..|-|||
T Consensus 317 PENILL~~~~r~~vKVIDFGSSc~~~q~vy---tYiQSRfYRAPE 358 (586)
T KOG0667|consen 317 PENILLKDPKRSRIKVIDFGSSCFESQRVY---TYIQSRFYRAPE 358 (586)
T ss_pred hhheeeccCCcCceeEEecccccccCCcce---eeeeccccccch
Confidence 8999997644 689999999976543221 223456899999
No 439
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.87 E-value=2.5e-05 Score=81.04 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=61.7
Q ss_pred ccccccCCCCcccccccccceeccC----------------------------------CC------------------C
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNS----------------------------------DS------------------S 721 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~----------------------------------~~------------------~ 721 (818)
|.|||+-++++.-++||-|+..... .. .
T Consensus 207 PENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~ae 286 (459)
T KOG0610|consen 207 PENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAE 286 (459)
T ss_pred cceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcC
Confidence 8999999999999999999753210 00 0
Q ss_pred ----CccccccccceeCCC--CCCc--chHHHHhcc-----------cCC----CccccceecccCCCcCccchHHHHHH
Q 003465 722 ----NRTLIAGTYRYIAPA--KHPQ--EILSLFSST-----------SDP----HITLTYILDQRISPPKKQKIVQDIAL 778 (818)
Q Consensus 722 ----~~~~~~gt~gy~aPE--~~~~--~~l~~~~~~-----------~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~ 778 (818)
-+...+||--|+||| +... ..++||... .++ +.++..|+-+.+..+. ..+....
T Consensus 287 p~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~---~~~vs~~ 363 (459)
T KOG0610|consen 287 PTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE---EPEVSSA 363 (459)
T ss_pred CCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC---CCcchhH
Confidence 012367999999999 2111 156677532 122 2334555555554433 1222334
Q ss_pred HHHHHHhccCCCCCCCCC
Q 003465 779 ASIVALACLQSKPKSVPT 796 (818)
Q Consensus 779 ~~~la~~C~~~~p~~RP~ 796 (818)
+-+++..-+.+||.+|-.
T Consensus 364 akDLIr~LLvKdP~kRlg 381 (459)
T KOG0610|consen 364 AKDLIRKLLVKDPSKRLG 381 (459)
T ss_pred HHHHHHHHhccChhhhhc
Confidence 445666788999999987
No 440
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.83 E-value=1.2e-05 Score=94.91 Aligned_cols=43 Identities=21% Similarity=0.240 Sum_probs=37.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+|||++.++++||+|||+++.............||+.|+|||
T Consensus 132 P~NILl~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe 174 (669)
T cd05610 132 PDNMLISNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPK 174 (669)
T ss_pred HHHEEEcCCCCEEEEeCCCCccccCCcccccccccCccccCcc
Confidence 8999999999999999999998755444455678999999999
No 441
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.79 E-value=5.1e-06 Score=81.03 Aligned_cols=228 Identities=22% Similarity=0.214 Sum_probs=115.2
Q ss_pred CCCCcceEEEccCCCCCCCCCcc----ccCCCCCcEEEccccccCCc----C-------CcccCCCCCCCEEEccCCcCC
Q 003465 242 GDLTNLNSLDLSSKQLSGPLPQE----IGYLENLVYLSLNVNNLTGP----I-------PSTLGRLTSLSDLDLSHNSLF 306 (818)
Q Consensus 242 ~~l~~L~~L~L~~n~l~~~~~~~----l~~l~~L~~L~L~~n~l~~~----~-------~~~l~~l~~L~~L~Ls~n~l~ 306 (818)
..+..++.++||+|-|...-..+ +.+-.+|+..+++.-- +|. + ...+-.||.|+..+||+|.+.
T Consensus 27 ~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~f-tgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 27 EMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAF-TGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhh-hcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 34667788888888776543333 3344566666665421 111 1 123455666777777777665
Q ss_pred CCCchh----hcCCCCCCeeeccCCcCCCCcCccccCCCCCCEEEcCCCcccccCCcCcCCCCCCCEEeccCCcCCCCC-
Q 003465 307 GPIPPT----LSHLTRLTTLKLFSNQINGSIPLGIGNLENLERVDMSSNKLEGPIPLTIGDLTNLIYLDLSLNQLSGPI- 381 (818)
Q Consensus 307 ~~~~~~----l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~- 381 (818)
...|+. +++...|++|.+++|.+...-..-++. .|. +|..|+ ...+-|.|+.+....|++....
T Consensus 106 ~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~--~la~nK-------Kaa~kp~Le~vicgrNRlengs~ 174 (388)
T COG5238 106 SEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALF--HLAYNK-------KAADKPKLEVVICGRNRLENGSK 174 (388)
T ss_pred cccchHHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHH--HHHHHh-------hhccCCCceEEEeccchhccCcH
Confidence 554433 334455666666665543110000110 000 000000 1123355666666666554221
Q ss_pred ---CcccCCCCCCCEEEccCCcCccc-----CCccccCCCCCCEEecccCcCcccC----CccccCCCCCCEEECcCCcC
Q 003465 382 ---PSTFGHLTLLKFLNLNSNKLNGS-----IPSELMNCFSLQSLILSNNSLTGRI----PSEIRNLSYLHELDLSLNFI 449 (818)
Q Consensus 382 ---~~~~~~l~~L~~L~L~~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~L~Ls~N~l 449 (818)
...+..-..|+++.+.+|.|... +-..+..+.+|+.|||..|.++-.- ...++..+.|+.|.+..|-+
T Consensus 175 ~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDCll 254 (388)
T COG5238 175 ELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLL 254 (388)
T ss_pred HHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhh
Confidence 11223335677777777766421 1112345678888888888776422 22345566788888888887
Q ss_pred CccCChhhhcCccccccccccEEECCCCcCcc
Q 003465 450 SGMTPPQHFKQKHSIRDRLLTYVNHQFNRLSG 481 (818)
Q Consensus 450 ~~~~p~~~~~~~~~~~~~~L~~l~ls~n~l~g 481 (818)
+.................+|..|-..+|...|
T Consensus 255 s~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 255 SNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred ccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 76655554443322222344444444444443
No 442
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.78 E-value=1.2e-05 Score=78.22 Aligned_cols=105 Identities=10% Similarity=0.161 Sum_probs=62.8
Q ss_pred ccccccCCCCccccc--ccccceeccCCCCCccccccccceeCCC---CCCcc----hHHHHhc---------ccCCC--
Q 003465 694 FNNILLNSEFEAFFG--NFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE----ILSLFSS---------TSDPH-- 753 (818)
Q Consensus 694 ~~NILLd~~~~~ki~--DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~----~l~~~~~---------~~~~~-- 753 (818)
+..|++|++++|||+ |--++- ...+-+.++.||+|| ++|.| ..+.|+. +..+.
T Consensus 319 s~hvmidedltarismad~kfsf-------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfad 391 (448)
T KOG0195|consen 319 SKHVMIDEDLTARISMADTKFSF-------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFAD 391 (448)
T ss_pred cceEEecchhhhheecccceeee-------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccccc
Confidence 568999999999985 322111 112335678899999 66766 2233321 11111
Q ss_pred cccc----ceecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 754 ITLT----YILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 754 ~~~~----~~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
..-. .+.-..++... +......+.+++--|..+||.+||.+..|+-.|+++.
T Consensus 392 lspmecgmkialeglrv~i---ppgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 392 LSPMECGMKIALEGLRVHI---PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred CCchhhhhhhhhccccccC---CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 1111 11111122111 2333456777888999999999999999999999864
No 443
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.77 E-value=5.6e-07 Score=78.58 Aligned_cols=104 Identities=19% Similarity=0.250 Sum_probs=56.6
Q ss_pred cEEEcCCCCCcc--cCCccccCCCcCceecccCcccccCCCCCCC-CCCCCcEEECcCCCCCCCCccccCCCCCCCEEEc
Q 003465 104 ESFRIWYSNISG--NIPSEIGALSKLQILDLSHNNLTGTIPSKLG-NLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDL 180 (818)
Q Consensus 104 ~~L~L~~n~~~~--~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 180 (818)
..++|+.+.+.. ..+..+.+..+|+..+|++|.+. .+|..|. ..+.++.|+|++|.++ .+|..+..++.|+.|++
T Consensus 30 h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 30 HFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hhcccccchhhHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 345555554431 11223444555666666666666 3444443 3345666666666666 45555666666666666
Q ss_pred cCCCCCCCCccCCCCCCCCcEEEcccCcCC
Q 003465 181 SSNSLVGPIPFTLGHLTQLTTLKLFSNQIN 210 (818)
Q Consensus 181 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 210 (818)
+.|.+. ..|..+..|.+|-+|+..+|.+.
T Consensus 108 ~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 108 RFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 666655 34444445566666666555544
No 444
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=97.75 E-value=1.4e-05 Score=79.12 Aligned_cols=109 Identities=15% Similarity=0.148 Sum_probs=61.8
Q ss_pred ccccccC---CCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhc---------ccCCCcc-c
Q 003465 694 FNNILLN---SEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSS---------TSDPHIT-L 756 (818)
Q Consensus 694 ~~NILLd---~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~---------~~~~~~~-~ 756 (818)
|.|+|-. .+-..|++|||+||..... ....+.+-|+.|+||| ...+| .-+.|.- ...+..+ -
T Consensus 189 pENLLyt~t~~na~lKLtDfGFAK~t~~~-~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~h 267 (400)
T KOG0604|consen 189 PENLLYTTTSPNAPLKLTDFGFAKETQEP-GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267 (400)
T ss_pred hhheeeecCCCCcceEecccccccccCCC-ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccC
Confidence 8999985 4567899999999975432 2345678999999999 11122 2222321 1111111 0
Q ss_pred cceecccCC-----CcC--ccchHHHHHHHH-HHHHhccCCCCCCCCChHHHHHH
Q 003465 757 TYILDQRIS-----PPK--KQKIVQDIALAS-IVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 757 ~~~~d~~l~-----~~~--~~~~~~~~~~~~-~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
...+.|.+. +.+ .+..+.|+.+.. +++..-+..+|.+|-|+.+|+..
T Consensus 268 g~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 268 GLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred CccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 112233221 111 112334444433 35555678999999999998753
No 445
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.74 E-value=0.00011 Score=78.28 Aligned_cols=15 Identities=13% Similarity=-0.046 Sum_probs=7.3
Q ss_pred CCCCcEEEcCCCCCc
Q 003465 100 FPNLESFRIWYSNIS 114 (818)
Q Consensus 100 l~~L~~L~L~~n~~~ 114 (818)
+.++++|++++|.+.
T Consensus 51 ~~~l~~L~Is~c~L~ 65 (426)
T PRK15386 51 ARASGRLYIKDCDIE 65 (426)
T ss_pred hcCCCEEEeCCCCCc
Confidence 344555555555433
No 446
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.72 E-value=1.2e-05 Score=88.87 Aligned_cols=42 Identities=33% Similarity=0.453 Sum_probs=35.0
Q ss_pred cccccc----CCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILL----NSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILL----d~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|.||++ |..---|++|||.||.+++++ ..+.++||.-|.|||
T Consensus 148 P~NIvl~~Gedgq~IyKLtDfG~Arel~d~s-~~~S~vGT~~YLhPe 193 (732)
T KOG4250|consen 148 PGNIVLQIGEDGQSIYKLTDFGAARELDDNS-LFTSLVGTEEYLHPE 193 (732)
T ss_pred CCcEEEeecCCCceEEeeecccccccCCCCC-eeeeecCchhhcChH
Confidence 899998 344457999999999987665 556789999999998
No 447
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.70 E-value=0.00015 Score=77.46 Aligned_cols=32 Identities=34% Similarity=0.295 Sum_probs=16.6
Q ss_pred CCCCEEEccCCcCcccCCccccCCCCCCEEecccC
Q 003465 389 TLLKFLNLNSNKLNGSIPSELMNCFSLQSLILSNN 423 (818)
Q Consensus 389 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 423 (818)
++|++|++++|... ..|..+. .+|+.|+++.|
T Consensus 156 sSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 156 PSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred CcccEEEecCCCcc-cCccccc--ccCcEEEeccc
Confidence 35666666665543 2233222 46666666555
No 448
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.67 E-value=2.2e-06 Score=74.98 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=77.6
Q ss_pred cCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCC
Q 003465 97 FSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLS 176 (818)
Q Consensus 97 l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 176 (818)
+....+|...+|++|.+....+..-.+++.++.|+|++|.++ .+|..+..++.|+.|+++.|.+. ..|..+..|.+|-
T Consensus 49 l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~ 126 (177)
T KOG4579|consen 49 LSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLD 126 (177)
T ss_pred HhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHH
Confidence 455567888899999998554444467779999999999999 67888999999999999999998 7888888899999
Q ss_pred EEEccCCCCCCCCccC
Q 003465 177 ILDLSSNSLVGPIPFT 192 (818)
Q Consensus 177 ~L~L~~n~l~~~~~~~ 192 (818)
.|+..+|.+. .+|..
T Consensus 127 ~Lds~~na~~-eid~d 141 (177)
T KOG4579|consen 127 MLDSPENARA-EIDVD 141 (177)
T ss_pred HhcCCCCccc-cCcHH
Confidence 9999998876 44443
No 449
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=97.66 E-value=1.9e-05 Score=83.58 Aligned_cols=53 Identities=23% Similarity=0.392 Sum_probs=42.5
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHh
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFS 747 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~ 747 (818)
|.|.+||.++.+|+-|||+||.+..+...+ +.+||+-|+||| .+..| .++.|+
T Consensus 548 PENllLd~~Gy~KLVDFGFAKki~~g~KTw-TFcGTpEYVAPEIILnKGHD~avDyWa 604 (732)
T KOG0614|consen 548 PENLLLDNRGYLKLVDFGFAKKIGSGRKTW-TFCGTPEYVAPEIILNKGHDRAVDYWA 604 (732)
T ss_pred hhheeeccCCceEEeehhhHHHhccCCcee-eecCCcccccchhhhccCcchhhHHHH
Confidence 999999999999999999999987665544 489999999999 22223 455565
No 450
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.60 E-value=0.00011 Score=69.06 Aligned_cols=103 Identities=23% Similarity=0.257 Sum_probs=59.0
Q ss_pred cCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCC-ccCCCCCCCCcEEEc
Q 003465 126 KLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPI-PFTLGHLTQLTTLKL 204 (818)
Q Consensus 126 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~L 204 (818)
....+||++|.+... ..|..++.|.+|.|++|+|+.+.|.--..+++|+.|.|.+|.+.... -..+..+++|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 456677777776532 34666777777777777777555554445566777777777665211 123455666666666
Q ss_pred ccCcCCccC---CccccCCCCCCEEEccC
Q 003465 205 FSNQINGCI---PLDFGNLRHLKEVDLSG 230 (818)
Q Consensus 205 ~~n~l~~~~---~~~l~~l~~L~~L~l~~ 230 (818)
-+|.++..- --.+..+++|+.||+.+
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhh
Confidence 666654311 11234455555555543
No 451
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.57 E-value=5.8e-05 Score=53.54 Aligned_cols=34 Identities=38% Similarity=0.610 Sum_probs=12.2
Q ss_pred CcEEECcCCCCCCCCccccCCCCCCCEEEccCCCC
Q 003465 151 LVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSL 185 (818)
Q Consensus 151 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l 185 (818)
|++|++++|+|+ .+|..+++|++|++|++++|.+
T Consensus 3 L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i 36 (44)
T PF12799_consen 3 LEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPI 36 (44)
T ss_dssp -SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCC
T ss_pred ceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCC
Confidence 333444444333 2232333344444444444333
No 452
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.54 E-value=5.5e-05 Score=75.66 Aligned_cols=49 Identities=16% Similarity=0.090 Sum_probs=35.1
Q ss_pred cchHHHHHHHhhhhhhcccc----CcEEEEE-cCCCcEEEEEeccccccchhhhhHhhh
Q 003465 638 IAFEEIIRATEDLISDIALE----LDVTAAF-TKHGCLVAEYGSEQGRSAFFKSFQNEA 691 (818)
Q Consensus 638 ~~~~~l~~at~~f~~~~~ig----g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~f~~E~ 691 (818)
-+|+|+.+.|.. .+| +.|--++ +.+|..+|||++.+.......+..+||
T Consensus 73 g~F~d~YkLt~e-----~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREV 126 (463)
T KOG0607|consen 73 GKFEDMYKLTSE-----LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREV 126 (463)
T ss_pred chHHHHHHhHHH-----HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHH
Confidence 457888888854 355 5666665 578999999988877655556666776
No 453
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.53 E-value=7e-05 Score=53.13 Aligned_cols=37 Identities=49% Similarity=0.629 Sum_probs=18.0
Q ss_pred CCCEEecccCcCcccCCccccCCCCCCEEECcCCcCCc
Q 003465 414 SLQSLILSNNSLTGRIPSEIRNLSYLHELDLSLNFISG 451 (818)
Q Consensus 414 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 451 (818)
+|++|++++|+|+ .+|..+.++++|+.|++++|+++.
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCSB
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCCC
Confidence 4555555555555 334345555555555555555543
No 454
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.48 E-value=0.00021 Score=67.22 Aligned_cols=57 Identities=32% Similarity=0.353 Sum_probs=22.6
Q ss_pred CcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcEEEcccCcC
Q 003465 151 LVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTTLKLFSNQI 209 (818)
Q Consensus 151 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 209 (818)
...+||++|.+.. + ..|..++.|.+|.|.+|.|+..-|.--..+++|..|.|.+|+|
T Consensus 44 ~d~iDLtdNdl~~-l-~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi 100 (233)
T KOG1644|consen 44 FDAIDLTDNDLRK-L-DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSI 100 (233)
T ss_pred cceecccccchhh-c-ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcch
Confidence 3444444444431 1 1234444444444444444433332222333344444444433
No 455
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.45 E-value=3.7e-05 Score=83.51 Aligned_cols=23 Identities=22% Similarity=0.366 Sum_probs=20.9
Q ss_pred ccccccCCCCcccccccccceec
Q 003465 694 FNNILLNSEFEAFFGNFGVARLL 716 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~ 716 (818)
|.|||+|.+++.|++||||..-+
T Consensus 757 PDNILIDrdGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 757 PDNILIDRDGHIKLTDFGLCTGF 779 (1034)
T ss_pred ccceEEccCCceeeeeccccccc
Confidence 89999999999999999997543
No 456
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=97.31 E-value=0.00024 Score=71.45 Aligned_cols=42 Identities=33% Similarity=0.329 Sum_probs=36.1
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
|+||++..+...||.|||+|+.-..+ -.+|..+.|..|-|||
T Consensus 146 Psnivv~~~~~lKi~dfg~ar~e~~~-~~mtpyVvtRyyrape 187 (369)
T KOG0665|consen 146 PSNIVVNSDCTLKILDFGLARTEDTD-FMMTPYVVTRYYRAPE 187 (369)
T ss_pred cccceecchhheeeccchhhcccCcc-cccCchhheeeccCch
Confidence 99999999999999999999865443 3456778899999999
No 457
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.25 E-value=0.00011 Score=85.41 Aligned_cols=106 Identities=25% Similarity=0.345 Sum_probs=54.5
Q ss_pred CcCceecccCcccccC-CCCCC-CCCCCCcEEECcCCCCCCC-CccccCCCCCCCEEEccCCCCCCCCccCCCCCCCCcE
Q 003465 125 SKLQILDLSHNNLTGT-IPSKL-GNLNNLVELYLSRSNLNGP-IPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQLTT 201 (818)
Q Consensus 125 ~~L~~L~Ls~n~l~~~-~p~~~-~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 201 (818)
.+|++||+++...-.. -|..+ .-||+|+.|.+++-.+... .-....++++|..||+|+++++.. .++++|++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 4566777766433211 11122 2356666666666554321 122345566666666666666533 45566666666
Q ss_pred EEcccCcCCc-cCCccccCCCCCCEEEccCCc
Q 003465 202 LKLFSNQING-CIPLDFGNLRHLKEVDLSGNK 232 (818)
Q Consensus 202 L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~ 232 (818)
|.+.+=.+.. ..-..+.+|++|++||+|...
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~ 231 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDK 231 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccc
Confidence 6655544432 112234556666666665544
No 458
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=97.24 E-value=0.00036 Score=49.36 Aligned_cols=35 Identities=34% Similarity=0.577 Sum_probs=21.8
Q ss_pred HHHHHHHHcCC-------CCCCCCCCCCCCCCCCCccceeeC
Q 003465 38 RLEREALLNTG-------WWNNSREKASNHSDHCKWAGIVCN 72 (818)
Q Consensus 38 ~~~~~~ll~~~-------~~~~~~~~~~~~~~~c~w~gv~c~ 72 (818)
..|++||+.++ ...+.+|......+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 47889998753 234678974223799999999996
No 459
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.08 E-value=0.00028 Score=69.38 Aligned_cols=86 Identities=24% Similarity=0.359 Sum_probs=39.4
Q ss_pred CCCcCceecccCcccccCCCCCCCCCCCCcEEECcCC--CCCCCCccccCCCCCCCEEEccCCCCCCC-CccCCCCCCCC
Q 003465 123 ALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRS--NLNGPIPSTLGHLTRLSILDLSSNSLVGP-IPFTLGHLTQL 199 (818)
Q Consensus 123 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n--~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L 199 (818)
.+..|+.|++.+..++.. ..|..|++|++|.++.| ++.+.++-....+++|++|++++|++... --..+..+.+|
T Consensus 41 ~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL 118 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENL 118 (260)
T ss_pred cccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcch
Confidence 334444444444444421 23444555555555555 33333333334445555555555555420 00123344455
Q ss_pred cEEEcccCcCC
Q 003465 200 TTLKLFSNQIN 210 (818)
Q Consensus 200 ~~L~L~~n~l~ 210 (818)
..|++.+|..+
T Consensus 119 ~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 119 KSLDLFNCSVT 129 (260)
T ss_pred hhhhcccCCcc
Confidence 55555555444
No 460
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.05 E-value=0.0015 Score=59.35 Aligned_cols=106 Identities=19% Similarity=0.207 Sum_probs=43.5
Q ss_pred CCcCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCC
Q 003465 95 FNFSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTR 174 (818)
Q Consensus 95 ~~l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~ 174 (818)
..|.++++|+.+.+.. .+...-...|..+++|+.+.+.++ +.......|.++.+|+++.+.+ .+.......|..+++
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 3466666666666653 344344445666666666666554 4433334555555566666644 222222334455555
Q ss_pred CCEEEccCCCCCCCCccCCCCCCCCcEEEcc
Q 003465 175 LSILDLSSNSLVGPIPFTLGHLTQLTTLKLF 205 (818)
Q Consensus 175 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 205 (818)
|+.+++..+ +.......|.+. +|+.+.+.
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 555555443 332222334443 55555444
No 461
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.01 E-value=0.00034 Score=81.23 Aligned_cols=134 Identities=23% Similarity=0.256 Sum_probs=93.5
Q ss_pred CCCcEEEcCCCCCc-ccCCcccc-CCCcCceecccCcccccC-CCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCE
Q 003465 101 PNLESFRIWYSNIS-GNIPSEIG-ALSKLQILDLSHNNLTGT-IPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSI 177 (818)
Q Consensus 101 ~~L~~L~L~~n~~~-~~~~~~~~-~l~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 177 (818)
.+|++|++++...- ...|..++ .||+|+.|.+++-.+... .-....++++|+.||+|++.++.. ..+++|++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 47888888875432 22333443 578999999988766532 223456788999999999998744 67889999999
Q ss_pred EEccCCCCCC-CCccCCCCCCCCcEEEcccCcCCccC--C----ccccCCCCCCEEEccCCcCCCC
Q 003465 178 LDLSSNSLVG-PIPFTLGHLTQLTTLKLFSNQINGCI--P----LDFGNLRHLKEVDLSGNKLNGP 236 (818)
Q Consensus 178 L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~--~----~~l~~l~~L~~L~l~~n~l~~~ 236 (818)
|.+.+=.+.. ..-..+.+|++|++||+|........ . +.-..|++|+.||.+++.+...
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 9888766653 22235678999999999987654221 0 1123478999999998877653
No 462
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.95 E-value=0.0019 Score=58.69 Aligned_cols=105 Identities=16% Similarity=0.214 Sum_probs=39.2
Q ss_pred cccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCCEEEccCCCCCCCCccCCCCCCCC
Q 003465 120 EIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLSILDLSSNSLVGPIPFTLGHLTQL 199 (818)
Q Consensus 120 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 199 (818)
.|.++++|+.+.+.. .+.......|.++++|+.+.+..+ +.......|.++++|+.+.+.+ .+.......|..+++|
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 455555666666553 344333445555555666665543 3323333455555555555543 2222222334445555
Q ss_pred cEEEcccCcCCccCCccccCCCCCCEEEcc
Q 003465 200 TTLKLFSNQINGCIPLDFGNLRHLKEVDLS 229 (818)
Q Consensus 200 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 229 (818)
+.+++..+ +.......|.+. +|+.+.+.
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 55555433 322223334443 44444443
No 463
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=96.92 E-value=0.0008 Score=73.85 Aligned_cols=114 Identities=15% Similarity=0.232 Sum_probs=65.4
Q ss_pred ccccccCCCCcccccccccceeccCC--CCCccccccccceeCCC--CC---------Cc---c------hHHHHhcc--
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD--SSNRTLIAGTYRYIAPA--KH---------PQ---E------ILSLFSST-- 749 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~--~~~~~~~~gt~gy~aPE--~~---------~~---~------~l~~~~~~-- 749 (818)
++|.++|..|..|++|||+..+.... ........-..-|.||| +. .+ | .+.+-..+
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 78999999999999999998877421 11112223345699999 11 11 1 11111111
Q ss_pred cCCC----ccccceecc----c---CCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccCC
Q 003465 750 SDPH----ITLTYILDQ----R---ISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKFP 808 (818)
Q Consensus 750 ~~~~----~~~~~~~d~----~---l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~~ 808 (818)
.+.. ....+++.+ . .++.. ....+....++.++..||.++|++||++.+|-..++.+.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i-~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSI-ELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccccccccCChHHHHHHHHhcCCCCcCcch-hhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 1111 000122221 1 11111 001123335788889999999999999999999988774
No 464
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=96.89 E-value=0.00099 Score=66.90 Aligned_cols=44 Identities=32% Similarity=0.441 Sum_probs=34.6
Q ss_pred ccccccCCCCcccccccccceeccCCC-CCccccccccceeCCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS-SNRTLIAGTYRYIAPAK 737 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~-~~~~~~~gt~gy~aPE~ 737 (818)
++||+++.+..++++|||.++...... .......|+..|++||.
T Consensus 126 ~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~ 170 (225)
T smart00221 126 PENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEV 170 (225)
T ss_pred HHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhH
Confidence 789999999999999999998875442 12234567888999984
No 465
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=96.85 E-value=0.00067 Score=70.02 Aligned_cols=29 Identities=10% Similarity=-0.024 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 774 QDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 774 ~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
.+..+++++....+..||.+|+|.+|+++
T Consensus 377 ~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 377 LEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 45667889999999999999999999874
No 466
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.84 E-value=0.00083 Score=79.34 Aligned_cols=107 Identities=16% Similarity=0.163 Sum_probs=63.5
Q ss_pred cccccCCCCcccccccccceeccCCCC--CccccccccceeCCC---CCCcc-hHHHHhcc-----------cCCCcccc
Q 003465 695 NNILLNSEFEAFFGNFGVARLLNSDSS--NRTLIAGTYRYIAPA---KHPQE-ILSLFSST-----------SDPHITLT 757 (818)
Q Consensus 695 ~NILLd~~~~~ki~DFGla~~~~~~~~--~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~-----------~~~~~~~~ 757 (818)
.|++++.+..+++.|||.++....+.. ....++||++|+||| ..+.+ ..+.|... .+......
T Consensus 507 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~ 586 (669)
T cd05610 507 GNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ 586 (669)
T ss_pred CceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 367777777789999999988754422 234578999999999 22222 34444321 11111111
Q ss_pred c----eecccCCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 003465 758 Y----ILDQRISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQE 803 (818)
Q Consensus 758 ~----~~d~~l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~ 803 (818)
+ +++..+.... ........+.++...|++.+|++||+|.||++.
T Consensus 587 ~~~~~il~~~~~~p~--~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h 634 (669)
T cd05610 587 QVFQNILNRDIPWPE--GEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH 634 (669)
T ss_pred HHHHHHHhcCCCCCc--ccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence 2 2222221111 111223345667778999999999999999865
No 467
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=96.69 E-value=0.0011 Score=64.80 Aligned_cols=22 Identities=9% Similarity=0.021 Sum_probs=19.2
Q ss_pred ccccccCCCCcccccccccceec
Q 003465 694 FNNILLNSEFEAFFGNFGVARLL 716 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~ 716 (818)
|+|||+| +..+|+.|||+|...
T Consensus 146 P~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 146 EYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHEEEE-CCcEEEEEccccccC
Confidence 8999999 478999999998754
No 468
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=96.69 E-value=0.0023 Score=63.19 Aligned_cols=24 Identities=13% Similarity=0.126 Sum_probs=21.7
Q ss_pred ccccccCCCCcccccccccceecc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLN 717 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~ 717 (818)
|+||++|+++++||+|||+++...
T Consensus 153 p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cccEEEcCCCcEEEEECCccccCC
Confidence 899999999999999999997553
No 469
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=96.63 E-value=0.0018 Score=69.38 Aligned_cols=87 Identities=18% Similarity=0.164 Sum_probs=52.7
Q ss_pred ccccccCCCC-cccccccccceeccCCCCCccccccccceeCCC---CCCcc-hHHHHhcccCCCccccceecccCCCcC
Q 003465 694 FNNILLNSEF-EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA---KHPQE-ILSLFSSTSDPHITLTYILDQRISPPK 768 (818)
Q Consensus 694 ~~NILLd~~~-~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE---~~~~~-~l~~~~~~~~~~~~~~~~~d~~l~~~~ 768 (818)
|.|||+.+.- ..|+||||-|-...... .+. -.-+..|-||| ..|++ .+..|..... +.++....+..+.
T Consensus 564 PDNiLVNE~k~iLKLCDfGSA~~~~ene-itP-YLVSRFYRaPEIiLG~~yd~~iD~WSvgct----LYElYtGkIlFpG 637 (752)
T KOG0670|consen 564 PDNILVNESKNILKLCDFGSASFASENE-ITP-YLVSRFYRAPEIILGLPYDYPIDTWSVGCT----LYELYTGKILFPG 637 (752)
T ss_pred ccceEeccCcceeeeccCcccccccccc-ccH-HHHHHhccCcceeecCcccCCccceeecee----eEEeeccceecCC
Confidence 8999998755 68999999987654322 121 12345799999 56666 6778876543 5555555554332
Q ss_pred ccchHHHHHHHHHHHHhccCCCC
Q 003465 769 KQKIVQDIALASIVALACLQSKP 791 (818)
Q Consensus 769 ~~~~~~~~~~~~~la~~C~~~~p 791 (818)
. . -..++++++.|--.-|
T Consensus 638 ~--T---NN~MLrl~me~KGk~p 655 (752)
T KOG0670|consen 638 R--T---NNQMLRLFMELKGKFP 655 (752)
T ss_pred C--C---cHHHHHHHHHhcCCCc
Confidence 1 1 1234455555544443
No 470
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=96.58 E-value=0.0021 Score=62.91 Aligned_cols=24 Identities=21% Similarity=0.184 Sum_probs=21.5
Q ss_pred ccccccCCCCcccccccccceeccC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNS 718 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~ 718 (818)
|.|||++ ++++++.|||+|+.+..
T Consensus 146 P~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 146 EYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hhhEEEE-CCCEEEEEcccceecCC
Confidence 8999999 88999999999987653
No 471
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=96.31 E-value=8.8e-05 Score=77.16 Aligned_cols=83 Identities=20% Similarity=0.074 Sum_probs=42.4
Q ss_pred CcCceecccCcccccCC--CCCCCCCCCCcEEECcCCCC-CCCCcccc-CCCCCCCEEEccCCC-CCCCCcc-CCCCCCC
Q 003465 125 SKLQILDLSHNNLTGTI--PSKLGNLNNLVELYLSRSNL-NGPIPSTL-GHLTRLSILDLSSNS-LVGPIPF-TLGHLTQ 198 (818)
Q Consensus 125 ~~L~~L~Ls~n~l~~~~--p~~~~~l~~L~~L~Ls~n~l-~~~~p~~l-~~l~~L~~L~L~~n~-l~~~~~~-~l~~l~~ 198 (818)
..|+.|.|.++.-.+.- -....+++++++|.+.++.. ++..-..+ ..+++|++|+|..|. ++...-. -...+++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~k 217 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRK 217 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhh
Confidence 35777788777543221 12335677777777777652 21111111 345667777776632 3322111 1124566
Q ss_pred CcEEEcccC
Q 003465 199 LTTLKLFSN 207 (818)
Q Consensus 199 L~~L~L~~n 207 (818)
|++|+++++
T Consensus 218 L~~lNlSwc 226 (483)
T KOG4341|consen 218 LKYLNLSWC 226 (483)
T ss_pred HHHhhhccC
Confidence 666666655
No 472
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.31 E-value=0.0032 Score=72.43 Aligned_cols=109 Identities=17% Similarity=0.183 Sum_probs=65.3
Q ss_pred ccccccCCCCcccccccccceeccCC--C--CCccccccccceeCCC---CCCcc--hHHHHhcccCC------C--ccc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSD--S--SNRTLIAGTYRYIAPA---KHPQE--ILSLFSSTSDP------H--ITL 756 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~--~--~~~~~~~gt~gy~aPE---~~~~~--~l~~~~~~~~~------~--~~~ 756 (818)
+.|++++.++..||.|||.+-.+..+ . ....+++|+-+|+||| ...++ -+..|...... . +..
T Consensus 448 ~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~ 527 (601)
T KOG0590|consen 448 LENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKV 527 (601)
T ss_pred cccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccc
Confidence 78999999999999999999877543 2 3456889999999999 22222 23445431110 0 000
Q ss_pred cceeccc-----------CCCcCccchHHHHHHHHHHHHhccCCCCCCCCChHHHHH
Q 003465 757 TYILDQR-----------ISPPKKQKIVQDIALASIVALACLQSKPKSVPTMQRVSQ 802 (818)
Q Consensus 757 ~~~~d~~-----------l~~~~~~~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~ 802 (818)
...-|+. +...............-.+..+.++.+|.+|-+|.+|++
T Consensus 528 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 528 AKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 1111110 000000011122334455777889999999999999984
No 473
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.29 E-value=0.0029 Score=62.48 Aligned_cols=83 Identities=27% Similarity=0.309 Sum_probs=44.7
Q ss_pred CCCCEEeccCCcCCCCCCcccCCCCCCCEEEccCC--cCcccCCccccCCCCCCEEecccCcCcccCCc---cccCCCCC
Q 003465 365 TNLIYLDLSLNQLSGPIPSTFGHLTLLKFLNLNSN--KLNGSIPSELMNCFSLQSLILSNNSLTGRIPS---EIRNLSYL 439 (818)
Q Consensus 365 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N--~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~---~l~~l~~L 439 (818)
..|+.|++.+..++.. ..|..+++|+.|.++.| ++.+.++.....+++|++|++++|++.. +. .+..+.+|
T Consensus 43 ~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l~nL 118 (260)
T KOG2739|consen 43 VELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKELENL 118 (260)
T ss_pred cchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhhcch
Confidence 3444444444444422 23445566666666666 4444444444555666777777766652 22 23455566
Q ss_pred CEEECcCCcCCc
Q 003465 440 HELDLSLNFISG 451 (818)
Q Consensus 440 ~~L~Ls~N~l~~ 451 (818)
..||+.+|..+.
T Consensus 119 ~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 119 KSLDLFNCSVTN 130 (260)
T ss_pred hhhhcccCCccc
Confidence 667776665543
No 474
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=96.27 E-value=0.0056 Score=68.06 Aligned_cols=25 Identities=20% Similarity=0.247 Sum_probs=22.8
Q ss_pred ccccccCCCCcccccccccceeccC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNS 718 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~ 718 (818)
|.||++++++++++.|||+++.+..
T Consensus 285 PgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 285 PGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred cccEEECCCCcEEEEeCCCeeECCH
Confidence 8999999999999999999987753
No 475
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=96.07 E-value=0.0041 Score=67.59 Aligned_cols=41 Identities=27% Similarity=0.329 Sum_probs=33.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
-.||.+|.++-+|+.|||-|.....+ .--..+||.+|.|||
T Consensus 698 denvivd~~g~~klidfgsaa~~ksg--pfd~f~gtv~~aape 738 (772)
T KOG1152|consen 698 DENVIVDSNGFVKLIDFGSAAYTKSG--PFDVFVGTVDYAAPE 738 (772)
T ss_pred cccEEEecCCeEEEeeccchhhhcCC--Ccceeeeeccccchh
Confidence 57999999999999999988765432 234578999999999
No 476
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.92 E-value=0.00031 Score=69.19 Aligned_cols=82 Identities=27% Similarity=0.164 Sum_probs=42.3
Q ss_pred CCCcEEEccccccCCcCCcccCCCCCCCEEEccCCcCCCCCchhhcCCCCCCeeeccCCcCCCCcC-ccccCCCCCCEEE
Q 003465 269 ENLVYLSLNVNNLTGPIPSTLGRLTSLSDLDLSHNSLFGPIPPTLSHLTRLTTLKLFSNQINGSIP-LGIGNLENLERVD 347 (818)
Q Consensus 269 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~ 347 (818)
.+.+.|++++|.+++. .....++.|+.|.|+-|+++..- .+..+++|++|+|..|.|...-- .-+.++++|+.|.
T Consensus 19 ~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 3455566666665532 22345566666666666665432 34556666666666665542110 1234455555555
Q ss_pred cCCCccc
Q 003465 348 MSSNKLE 354 (818)
Q Consensus 348 Ls~n~l~ 354 (818)
|..|.-.
T Consensus 95 L~ENPCc 101 (388)
T KOG2123|consen 95 LDENPCC 101 (388)
T ss_pred hccCCcc
Confidence 5555443
No 477
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.88 E-value=0.00022 Score=70.20 Aligned_cols=57 Identities=25% Similarity=0.430 Sum_probs=26.7
Q ss_pred CCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCC
Q 003465 102 NLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLN 162 (818)
Q Consensus 102 ~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 162 (818)
+.+.|+++++.+.+. .-..+|+.|++|.||-|+|+.. ..|..+++|++|+|..|.|.
T Consensus 20 ~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~ 76 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIE 76 (388)
T ss_pred HhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccc
Confidence 444555555554422 1123455555555555555432 22444555555555555443
No 478
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=95.88 E-value=0.00019 Score=74.74 Aligned_cols=83 Identities=16% Similarity=0.121 Sum_probs=50.2
Q ss_pred CCcEEEcCCCCCccc--CCccccCCCcCceecccCcc-cccCCCCCC-CCCCCCcEEECcCCC-CCCCCcc-ccCCCCCC
Q 003465 102 NLESFRIWYSNISGN--IPSEIGALSKLQILDLSHNN-LTGTIPSKL-GNLNNLVELYLSRSN-LNGPIPS-TLGHLTRL 175 (818)
Q Consensus 102 ~L~~L~L~~n~~~~~--~~~~~~~l~~L~~L~Ls~n~-l~~~~p~~~-~~l~~L~~L~Ls~n~-l~~~~p~-~l~~l~~L 175 (818)
.|+.|.+.++.-.+. +-..-.+++++++|++.++. +++..-.++ ..+++|++|+|..|. ++...-+ --..+++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 577777777654322 22344678888888888874 332211122 457888888888743 4332222 23457888
Q ss_pred CEEEccCCC
Q 003465 176 SILDLSSNS 184 (818)
Q Consensus 176 ~~L~L~~n~ 184 (818)
++|+++.+.
T Consensus 219 ~~lNlSwc~ 227 (483)
T KOG4341|consen 219 KYLNLSWCP 227 (483)
T ss_pred HHhhhccCc
Confidence 888888774
No 479
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=95.77 E-value=0.004 Score=67.40 Aligned_cols=43 Identities=26% Similarity=0.481 Sum_probs=35.0
Q ss_pred ccccccCCCCcccccccccceeccCCC------CCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDS------SNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~------~~~~~~~gt~gy~aPE 736 (818)
|+||..-.+...||.|||+.-...... ...+..+||.-||+||
T Consensus 384 p~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPE 432 (516)
T KOG1033|consen 384 PSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPE 432 (516)
T ss_pred ccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHH
Confidence 789999888899999999987665443 1246778999999999
No 480
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.47 E-value=0.00081 Score=76.63 Aligned_cols=187 Identities=25% Similarity=0.118 Sum_probs=90.2
Q ss_pred CCCcCceecccCcccccC--CCCCCCCCCCCcEEECcCC-CCCCCCc----cccCCCCCCCEEEccCCC-CCCCCccCCC
Q 003465 123 ALSKLQILDLSHNNLTGT--IPSKLGNLNNLVELYLSRS-NLNGPIP----STLGHLTRLSILDLSSNS-LVGPIPFTLG 194 (818)
Q Consensus 123 ~l~~L~~L~Ls~n~l~~~--~p~~~~~l~~L~~L~Ls~n-~l~~~~p----~~l~~l~~L~~L~L~~n~-l~~~~~~~l~ 194 (818)
.+++|+.|.+..+.-... .-.....+++|+.|+++++ ......+ .....+++|+.|+++++. +++..-..+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 367777777776632211 1233456677777777762 1111111 223445777777777776 4433222222
Q ss_pred -CCCCCcEEEcccCc-CCccC-CccccCCCCCCEEEccCCcCCCC--CCCCCCCCCcceEEEccCCCCCCCCCccccCCC
Q 003465 195 -HLTQLTTLKLFSNQ-INGCI-PLDFGNLRHLKEVDLSGNKLNGP--IASTIGDLTNLNSLDLSSKQLSGPLPQEIGYLE 269 (818)
Q Consensus 195 -~l~~L~~L~L~~n~-l~~~~-~~~l~~l~~L~~L~l~~n~l~~~--~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 269 (818)
.+++|++|.+.++. ++... ......+++|++|+++++..... +.....++++|+.|.+....- +.
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~----------c~ 335 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNG----------CP 335 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCC----------Cc
Confidence 26778887766665 44221 12234566788888887654310 111223345555544332210 23
Q ss_pred CCcEEEccccccC---CcCCcccCCCCCCCEEEccCCcCCCCC-chhhcCCCCC
Q 003465 270 NLVYLSLNVNNLT---GPIPSTLGRLTSLSDLDLSHNSLFGPI-PPTLSHLTRL 319 (818)
Q Consensus 270 ~L~~L~L~~n~l~---~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~l~~l~~L 319 (818)
.++.+.+...... ......+..++.++.+.+..+...... ...+..++.|
T Consensus 336 ~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l 389 (482)
T KOG1947|consen 336 SLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNL 389 (482)
T ss_pred cHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCccc
Confidence 3333333332221 111123455677777777766633222 2334445555
No 481
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=95.31 E-value=0.072 Score=52.86 Aligned_cols=40 Identities=23% Similarity=0.479 Sum_probs=26.6
Q ss_pred cccccc-CCC-CcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILL-NSE-FEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILL-d~~-~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
..|||+ |.| .++|++|||+.+..... ....--+..|-|||
T Consensus 149 ~eNiLif~~df~rvKlcDFG~t~k~g~t---V~~~~~~~~y~~pe 190 (378)
T KOG1345|consen 149 AENILIFDADFYRVKLCDFGLTRKVGTT---VKYLEYVNNYHAPE 190 (378)
T ss_pred cceEEEecCCccEEEeeecccccccCce---ehhhhhhcccCCcH
Confidence 579998 444 47999999998754321 12233455788898
No 482
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.16 E-value=0.02 Score=58.39 Aligned_cols=43 Identities=21% Similarity=0.355 Sum_probs=31.6
Q ss_pred ccccccCC-----CCcccccccccceeccCCCCC-------ccccccccceeCCC
Q 003465 694 FNNILLNS-----EFEAFFGNFGVARLLNSDSSN-------RTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~-----~~~~ki~DFGla~~~~~~~~~-------~~~~~gt~gy~aPE 736 (818)
|.|.|+.. ....+|.|||+||...+..+. .....||..||.--
T Consensus 152 PdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSIN 206 (449)
T KOG1165|consen 152 PDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSIN 206 (449)
T ss_pred ccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEee
Confidence 89999964 345789999999988543221 23567999999974
No 483
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=95.13 E-value=0.022 Score=64.38 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=22.4
Q ss_pred ccccccCCCC----cccccccccceeccC
Q 003465 694 FNNILLNSEF----EAFFGNFGVARLLNS 718 (818)
Q Consensus 694 ~~NILLd~~~----~~ki~DFGla~~~~~ 718 (818)
|.||+++.++ ..++.|||+++.++.
T Consensus 288 PGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 288 PGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred hHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 8999999998 899999999987753
No 484
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.06 E-value=0.0014 Score=74.69 Aligned_cols=10 Identities=40% Similarity=0.404 Sum_probs=5.7
Q ss_pred CCEEecccCc
Q 003465 415 LQSLILSNNS 424 (818)
Q Consensus 415 L~~L~Ls~N~ 424 (818)
++.|+++.+.
T Consensus 403 l~~L~l~~~~ 412 (482)
T KOG1947|consen 403 LRVLNLSDCR 412 (482)
T ss_pred cceEecccCc
Confidence 5556665555
No 485
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.84 E-value=0.0091 Score=35.15 Aligned_cols=19 Identities=37% Similarity=0.529 Sum_probs=10.8
Q ss_pred CCEEECCCCcCccCCccccc
Q 003465 507 LLNVTLSNNSLDGTIPLEMG 526 (818)
Q Consensus 507 L~~L~Ls~N~l~~~~p~~l~ 526 (818)
|+.|||++|+++ .+|..|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 556666666665 5555444
No 486
>smart00090 RIO RIO-like kinase.
Probab=94.72 E-value=0.029 Score=56.93 Aligned_cols=23 Identities=17% Similarity=0.127 Sum_probs=20.2
Q ss_pred ccccccCCCCcccccccccceecc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLN 717 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~ 717 (818)
|+||+++ ++++|+.|||.|+...
T Consensus 177 p~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 177 EYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhhEEEE-CCCEEEEEChhhhccC
Confidence 8999999 8899999999988653
No 487
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.71 E-value=0.013 Score=34.49 Aligned_cols=19 Identities=63% Similarity=0.884 Sum_probs=9.8
Q ss_pred CceecccCcccccCCCCCCC
Q 003465 127 LQILDLSHNNLTGTIPSKLG 146 (818)
Q Consensus 127 L~~L~Ls~n~l~~~~p~~~~ 146 (818)
|++|||++|+++ .+|..|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 455555555555 4444444
No 488
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=94.40 E-value=0.04 Score=56.77 Aligned_cols=40 Identities=20% Similarity=0.288 Sum_probs=23.9
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++|+++|.++.++++||+-........ .. ...+.+|.+||
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~--~~-~~~~~~~~PPe 212 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRY--RC-SEFPVAFTPPE 212 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEE--EG-GGS-TTTS-HH
T ss_pred eeeEEEcCCCCEEEcChHHHeecCcee--ec-cCCCcccCChh
Confidence 899999999999999999776543211 11 23446788898
No 489
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=94.39 E-value=0.044 Score=53.40 Aligned_cols=43 Identities=21% Similarity=0.338 Sum_probs=30.0
Q ss_pred ccccccCCCC---cccccccccceeccCCCC-------CccccccccceeCCC
Q 003465 694 FNNILLNSEF---EAFFGNFGVARLLNSDSS-------NRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~---~~ki~DFGla~~~~~~~~-------~~~~~~gt~gy~aPE 736 (818)
|.|.|..-+- ...+.||||||...+..+ .....+||..|..--
T Consensus 139 PdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASin 191 (341)
T KOG1163|consen 139 PDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASIN 191 (341)
T ss_pred ccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhh
Confidence 8999986543 467899999997743211 235678999997653
No 490
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=94.32 E-value=0.018 Score=60.54 Aligned_cols=34 Identities=12% Similarity=-0.130 Sum_probs=24.0
Q ss_pred HHhhhhhhcccc----CcEEEEEcC----CCcEEEEEecccc
Q 003465 646 ATEDLISDIALE----LDVTAAFTK----HGCLVAEYGSEQG 679 (818)
Q Consensus 646 at~~f~~~~~ig----g~vy~~~~~----~g~~vAvK~~~~~ 679 (818)
..+.|...+.|| ++||+|+.. ....||+|.+...
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t 75 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT 75 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc
Confidence 344566777777 789999863 4678999965444
No 491
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=93.96 E-value=0.015 Score=64.48 Aligned_cols=39 Identities=31% Similarity=0.492 Sum_probs=33.7
Q ss_pred ccccccCCCCcccccccccceeccCCCCCccccccccceeCCC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA 736 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE 736 (818)
++||++|.++++|+.|||++|..-..... +||+-|||||
T Consensus 125 ~enilld~~Ghi~~tdfglske~v~~~~~----cgt~eymApE 163 (612)
T KOG0603|consen 125 LENVLLLLEGHIKLTDFGLSKEAVKEKIA----CGTYEYRAPE 163 (612)
T ss_pred ccceeecccCccccCCchhhhHhHhhhhc----ccchhhhhhH
Confidence 78999999999999999999977443222 8999999999
No 492
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=93.71 E-value=0.051 Score=52.48 Aligned_cols=55 Identities=13% Similarity=0.274 Sum_probs=38.5
Q ss_pred ccccccCCCC-cccccccccceeccCCCCCccccccccceeCCC----CCCcc-hHHHHhcc
Q 003465 694 FNNILLNSEF-EAFFGNFGVARLLNSDSSNRTLIAGTYRYIAPA----KHPQE-ILSLFSST 749 (818)
Q Consensus 694 ~~NILLd~~~-~~ki~DFGla~~~~~~~~~~~~~~gt~gy~aPE----~~~~~-~l~~~~~~ 749 (818)
|.||++|..- ..|+.|.|||-+...+..-..+ +.+..|--|| .+-+| .++.|+..
T Consensus 160 PhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVR-VASRyfKGPELLVdy~~YDYSLD~WS~G 220 (338)
T KOG0668|consen 160 PHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDYQMYDYSLDMWSLG 220 (338)
T ss_pred cceeeechhhceeeeeecchHhhcCCCceeeee-eehhhcCCchheeechhccccHHHHHHH
Confidence 8999999755 6899999999887655433333 3455678899 33444 67777643
No 493
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.69 E-value=0.00051 Score=76.37 Aligned_cols=89 Identities=29% Similarity=0.228 Sum_probs=42.7
Q ss_pred CCCCCEEeccCCcCCCC----CCcccCCCCC-CCEEEccCCcCcccC----CccccCC-CCCCEEecccCcCcccCCc--
Q 003465 364 LTNLIYLDLSLNQLSGP----IPSTFGHLTL-LKFLNLNSNKLNGSI----PSELMNC-FSLQSLILSNNSLTGRIPS-- 431 (818)
Q Consensus 364 l~~L~~L~Ls~n~l~~~----~~~~~~~l~~-L~~L~L~~N~l~~~~----~~~~~~l-~~L~~L~Ls~N~l~~~~p~-- 431 (818)
..++++|.+++|.++.. +...+...+. +..|++.+|.+.+.. ...+..+ ..++.++++.|.|+..-..
T Consensus 203 ~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L 282 (478)
T KOG4308|consen 203 LSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDL 282 (478)
T ss_pred cccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHH
Confidence 34455555555554421 1112233333 445666666554321 1122223 4556666666666543322
Q ss_pred --cccCCCCCCEEECcCCcCCcc
Q 003465 432 --EIRNLSYLHELDLSLNFISGM 452 (818)
Q Consensus 432 --~l~~l~~L~~L~Ls~N~l~~~ 452 (818)
.+..++.++++.++.|++...
T Consensus 283 ~~~l~~~~~l~~l~l~~n~l~~~ 305 (478)
T KOG4308|consen 283 AEVLVSCRQLEELSLSNNPLTDY 305 (478)
T ss_pred HHHHhhhHHHHHhhcccCccccH
Confidence 234455666666666666543
No 494
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=93.47 E-value=0.18 Score=53.95 Aligned_cols=114 Identities=13% Similarity=0.096 Sum_probs=59.8
Q ss_pred ccccccCCC-----Ccccccccccce--ecc-CCCC------C-ccccccccceeCCC------CCCcchHHHHhc----
Q 003465 694 FNNILLNSE-----FEAFFGNFGVAR--LLN-SDSS------N-RTLIAGTYRYIAPA------KHPQEILSLFSS---- 748 (818)
Q Consensus 694 ~~NILLd~~-----~~~ki~DFGla~--~~~-~~~~------~-~~~~~gt~gy~aPE------~~~~~~l~~~~~---- 748 (818)
|+|++++.. ....+-|||+|| ... .... . ....+||..|.++. ..+.|++..|..
T Consensus 150 p~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~e 229 (322)
T KOG1164|consen 150 PENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLE 229 (322)
T ss_pred HHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHH
Confidence 899999865 568999999998 321 1111 1 23456999999987 333445555532
Q ss_pred ---ccCCCcccccee-cccCCC----cCcc-chHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 749 ---TSDPHITLTYIL-DQRISP----PKKQ-KIVQDIALASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 749 ---~~~~~~~~~~~~-d~~l~~----~~~~-~~~~~~~~~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
...+........ ...+.. .... ........+.++...+-..+..++|....+...+...
T Consensus 230 l~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 230 LLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred HhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 211110000000 000000 0000 0011223344455555567888899988888777655
No 495
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=93.47 E-value=0.087 Score=51.21 Aligned_cols=23 Identities=17% Similarity=0.186 Sum_probs=20.5
Q ss_pred ccccccCCCCcccccccccceecc
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLN 717 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~ 717 (818)
|+||+++ ++.+++.|||.++...
T Consensus 143 p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 143 EYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred hhhEEEE-CCcEEEEECccccccc
Confidence 8999999 9999999999997553
No 496
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=93.31 E-value=0.11 Score=61.38 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=23.7
Q ss_pred HHHHHHhccCCCCCCCCChHHHHHHHccC
Q 003465 779 ASIVALACLQSKPKSVPTMQRVSQEFLKF 807 (818)
Q Consensus 779 ~~~la~~C~~~~p~~RP~m~~V~~~L~~~ 807 (818)
+-.+.+...+.||++|-++.++++.=.++
T Consensus 267 ~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 267 LRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred HHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 44577889999999999999998875544
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=93.19 E-value=0.099 Score=58.75 Aligned_cols=25 Identities=28% Similarity=0.400 Sum_probs=22.0
Q ss_pred ccccccCCCCcccccccccceeccC
Q 003465 694 FNNILLNSEFEAFFGNFGVARLLNS 718 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~~~~ 718 (818)
|.||+++.+++.-.-|||+...++.
T Consensus 293 pGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 293 PGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ccceEEecCCcEEEEcCcceecCCH
Confidence 8999999999888899999887653
No 498
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=92.14 E-value=0.0062 Score=58.73 Aligned_cols=85 Identities=15% Similarity=0.228 Sum_probs=42.8
Q ss_pred cCCCCCCcEEEcCCCCCcccCCccccCCCcCceecccCcccccCCCCCCCCCCCCcEEECcCCCCCCCCccccCCCCCCC
Q 003465 97 FSCFPNLESFRIWYSNISGNIPSEIGALSKLQILDLSHNNLTGTIPSKLGNLNNLVELYLSRSNLNGPIPSTLGHLTRLS 176 (818)
Q Consensus 97 l~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 176 (818)
+..+.....||++.|.+. .+-..|+.++.|..||++.|.+. ..|..++.+..++.+++..|..+ ..|.+++.++.++
T Consensus 38 i~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k 114 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPK 114 (326)
T ss_pred hhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcc
Confidence 344445555555555443 12233444555555555555554 34555555555555555555544 4455555555555
Q ss_pred EEEccCCC
Q 003465 177 ILDLSSNS 184 (818)
Q Consensus 177 ~L~L~~n~ 184 (818)
++++.+|.
T Consensus 115 ~~e~k~~~ 122 (326)
T KOG0473|consen 115 KNEQKKTE 122 (326)
T ss_pred hhhhccCc
Confidence 55555544
No 499
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=92.05 E-value=0.0016 Score=72.51 Aligned_cols=183 Identities=27% Similarity=0.268 Sum_probs=122.0
Q ss_pred CCcEEEcCCCCCcccC----CccccCCCcCceecccCcccccCC----CCCCCCC-CCCcEEECcCCCCCCC----Cccc
Q 003465 102 NLESFRIWYSNISGNI----PSEIGALSKLQILDLSHNNLTGTI----PSKLGNL-NNLVELYLSRSNLNGP----IPST 168 (818)
Q Consensus 102 ~L~~L~L~~n~~~~~~----~~~~~~l~~L~~L~Ls~n~l~~~~----p~~~~~l-~~L~~L~Ls~n~l~~~----~p~~ 168 (818)
.+..|.|.+|.+.... -..+...+.|..|++++|.+.+.- -..+... ..|++|++..|.+++. +.+.
T Consensus 88 ~l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~ 167 (478)
T KOG4308|consen 88 SLLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAV 167 (478)
T ss_pred hHHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHH
Confidence 3777888888876443 335567788888999988887431 1222332 5677788888877643 4455
Q ss_pred cCCCCCCCEEEccCCCCCC----CCccCCC----CCCCCcEEEcccCcCCcc----CCccccCCCC-CCEEEccCCcCCC
Q 003465 169 LGHLTRLSILDLSSNSLVG----PIPFTLG----HLTQLTTLKLFSNQINGC----IPLDFGNLRH-LKEVDLSGNKLNG 235 (818)
Q Consensus 169 l~~l~~L~~L~L~~n~l~~----~~~~~l~----~l~~L~~L~L~~n~l~~~----~~~~l~~l~~-L~~L~l~~n~l~~ 235 (818)
+.....|+.++++.|.+.. .++..+. ...++++|++.+|.++.. +...+...+. +.+|++..|.+.+
T Consensus 168 L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d 247 (478)
T KOG4308|consen 168 LEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGD 247 (478)
T ss_pred HhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcch
Confidence 6667888888888887742 1222333 467889999999887631 1122444455 6778999988764
Q ss_pred C----CCCCCCCC-CcceEEEccCCCCCCCCCc----cccCCCCCcEEEccccccCCc
Q 003465 236 P----IASTIGDL-TNLNSLDLSSKQLSGPLPQ----EIGYLENLVYLSLNVNNLTGP 284 (818)
Q Consensus 236 ~----~~~~l~~l-~~L~~L~L~~n~l~~~~~~----~l~~l~~L~~L~L~~n~l~~~ 284 (818)
. ....+..+ ..++.++++.|.++..-.. .+..++.++++.++.|.+...
T Consensus 248 ~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~~ 305 (478)
T KOG4308|consen 248 VGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTDY 305 (478)
T ss_pred HHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccccH
Confidence 3 22334444 6789999999998865433 344677899999999988753
No 500
>PRK14879 serine/threonine protein kinase; Provisional
Probab=91.91 E-value=0.16 Score=50.48 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=19.1
Q ss_pred ccccccCCCCccccccccccee
Q 003465 694 FNNILLNSEFEAFFGNFGVARL 715 (818)
Q Consensus 694 ~~NILLd~~~~~ki~DFGla~~ 715 (818)
|.|||++ +..++|.|||+++.
T Consensus 123 p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 123 TSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccEEEE-CCCEEEEECCcccC
Confidence 8999999 78899999999875
Done!