Query 003466
Match_columns 818
No_of_seqs 374 out of 3298
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 23:57:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003466.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003466hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02974 adenosylmethionine-8- 100.0 2E-119 4E-124 1077.3 71.0 751 27-805 17-816 (817)
2 COG0161 BioA Adenosylmethionin 100.0 6.5E-81 1.4E-85 690.9 36.8 397 356-809 8-445 (449)
3 COG4992 ArgD Ornithine/acetylo 100.0 5.4E-74 1.2E-78 622.5 35.2 341 375-809 24-400 (404)
4 COG0160 GabT 4-aminobutyrate a 100.0 2E-73 4.4E-78 635.1 38.3 372 375-808 38-446 (447)
5 PRK07481 hypothetical protein; 100.0 7.1E-70 1.5E-74 622.0 40.9 397 355-808 4-446 (449)
6 PRK07482 hypothetical protein; 100.0 1.1E-69 2.4E-74 621.9 41.0 399 352-808 7-455 (461)
7 PRK05965 hypothetical protein; 100.0 5.6E-69 1.2E-73 615.9 39.8 398 353-809 6-449 (459)
8 PLN02760 4-aminobutyrate:pyruv 100.0 1.7E-68 3.8E-73 616.2 42.3 401 358-816 54-500 (504)
9 PRK08742 adenosylmethionine--8 100.0 1.4E-68 3.1E-73 612.9 41.2 398 353-808 23-468 (472)
10 PRK06943 adenosylmethionine--8 100.0 7.7E-68 1.7E-72 605.2 40.6 393 354-808 15-447 (453)
11 KOG1404 Alanine-glyoxylate ami 100.0 1.1E-68 2.3E-73 568.4 30.4 362 374-801 31-432 (442)
12 PRK07678 aminotransferase; Val 100.0 9.1E-68 2E-72 605.0 39.6 393 352-808 9-450 (451)
13 PRK07036 hypothetical protein; 100.0 4.4E-67 9.5E-72 600.9 41.5 397 353-809 11-454 (466)
14 PRK06105 aminotransferase; Pro 100.0 4.5E-67 9.8E-72 600.3 41.5 399 353-810 8-452 (460)
15 PRK07030 adenosylmethionine--8 100.0 4.3E-67 9.2E-72 600.6 40.9 396 354-808 8-447 (466)
16 PRK07480 putative aminotransfe 100.0 5.6E-67 1.2E-71 598.5 40.5 398 354-810 11-451 (456)
17 PRK06916 adenosylmethionine--8 100.0 6.6E-67 1.4E-71 598.9 39.3 397 354-809 17-457 (460)
18 PRK12403 putative aminotransfe 100.0 1.4E-66 3E-71 596.3 40.6 396 354-809 15-454 (460)
19 PRK06062 hypothetical protein; 100.0 3.9E-66 8.4E-71 591.2 39.6 387 355-810 18-448 (451)
20 PRK07483 hypothetical protein; 100.0 1E-65 2.2E-70 586.5 39.5 378 375-810 12-440 (443)
21 PRK06541 hypothetical protein; 100.0 3.8E-65 8.2E-70 584.0 41.7 400 352-809 11-457 (460)
22 PRK06173 adenosylmethionine--8 100.0 2.8E-65 6E-70 580.4 37.8 380 354-808 7-426 (429)
23 PRK05630 adenosylmethionine--8 100.0 1.7E-64 3.6E-69 573.2 37.8 376 353-807 4-420 (422)
24 PRK07986 adenosylmethionine--8 100.0 2E-64 4.4E-69 572.8 38.4 376 356-807 8-423 (428)
25 PRK09221 beta alanine--pyruvat 100.0 4.7E-64 1E-68 573.1 40.0 388 358-808 15-444 (445)
26 PRK06917 hypothetical protein; 100.0 6.6E-64 1.4E-68 572.2 41.0 373 378-809 16-439 (447)
27 PRK13360 omega amino acid--pyr 100.0 6.7E-64 1.4E-68 571.4 40.1 388 358-808 12-441 (442)
28 PRK06938 diaminobutyrate--2-ox 100.0 6E-63 1.3E-67 566.1 39.2 370 375-808 45-461 (464)
29 PRK11522 putrescine--2-oxoglut 100.0 6.8E-63 1.5E-67 564.6 37.9 352 375-812 63-456 (459)
30 PRK06082 4-aminobutyrate amino 100.0 1.1E-62 2.4E-67 563.5 39.5 376 359-810 43-454 (459)
31 PRK05639 4-aminobutyrate amino 100.0 1.8E-62 3.8E-67 561.3 39.7 372 376-809 36-445 (457)
32 TIGR03372 putres_am_tran putre 100.0 1.5E-62 3.1E-67 558.6 36.6 343 377-805 59-442 (442)
33 PRK08593 4-aminobutyrate amino 100.0 7.4E-62 1.6E-66 555.4 40.0 372 375-810 24-432 (445)
34 PRK06931 diaminobutyrate--2-ox 100.0 1.1E-61 2.4E-66 555.3 39.8 371 375-809 40-456 (459)
35 PRK06058 4-aminobutyrate amino 100.0 1.5E-61 3.3E-66 553.2 38.7 367 375-808 38-443 (443)
36 PRK05964 adenosylmethionine--8 100.0 2.6E-61 5.7E-66 548.7 37.7 380 353-808 4-423 (423)
37 TIGR00709 dat 2,4-diaminobutyr 100.0 1.6E-60 3.4E-65 544.4 39.4 370 375-808 21-436 (442)
38 PRK05769 4-aminobutyrate amino 100.0 3.4E-60 7.4E-65 541.1 39.8 369 375-808 36-440 (441)
39 PRK07495 4-aminobutyrate amino 100.0 5.2E-60 1.1E-64 537.2 39.1 362 376-809 23-423 (425)
40 KOG1401 Acetylornithine aminot 100.0 2.8E-60 6.2E-65 508.2 30.4 348 374-809 37-432 (433)
41 KOG1402 Ornithine aminotransfe 100.0 2.9E-60 6.2E-65 492.9 27.0 348 376-806 42-426 (427)
42 PRK06148 hypothetical protein; 100.0 3.5E-59 7.6E-64 577.0 39.9 366 375-808 606-1011(1013)
43 TIGR00508 bioA adenosylmethion 100.0 6.9E-59 1.5E-63 528.6 37.0 380 353-807 7-426 (427)
44 PRK08360 4-aminobutyrate amino 100.0 2.7E-58 5.9E-63 525.5 40.9 369 375-809 23-428 (443)
45 PRK08117 4-aminobutyrate amino 100.0 2.7E-58 5.8E-63 525.5 39.5 367 376-809 26-431 (433)
46 PRK06918 4-aminobutyrate amino 100.0 8.9E-58 1.9E-62 523.5 39.8 369 376-808 37-444 (451)
47 PRK04013 argD acetylornithine/ 100.0 3.9E-58 8.5E-63 510.9 34.7 333 374-808 5-361 (364)
48 TIGR00700 GABAtrnsam 4-aminobu 100.0 2.1E-57 4.6E-62 516.1 39.5 367 374-806 14-419 (420)
49 PRK06777 4-aminobutyrate amino 100.0 1.8E-57 3.8E-62 516.5 38.7 359 376-806 23-420 (421)
50 PRK09792 4-aminobutyrate trans 100.0 2.4E-57 5.2E-62 515.5 38.8 360 375-806 22-420 (421)
51 PRK09264 diaminobutyrate--2-ox 100.0 1.3E-57 2.8E-62 518.4 36.2 356 375-812 21-421 (425)
52 PRK04612 argD acetylornithine 100.0 1.8E-57 3.9E-62 513.8 37.1 348 375-809 22-405 (408)
53 TIGR02407 ectoine_ectB diamino 100.0 1.4E-57 3.1E-62 515.9 36.0 352 375-807 17-412 (412)
54 TIGR00699 GABAtrns_euk 4-amino 100.0 3.4E-57 7.4E-62 515.6 36.0 367 376-805 41-464 (464)
55 PRK06149 hypothetical protein; 100.0 4.6E-57 9.9E-62 557.9 38.9 364 375-807 567-970 (972)
56 PRK08297 L-lysine aminotransfe 100.0 7.9E-57 1.7E-61 513.4 37.7 363 378-808 29-442 (443)
57 PRK12389 glutamate-1-semialdeh 100.0 7.1E-57 1.5E-61 512.6 37.0 348 375-807 35-427 (428)
58 TIGR03246 arg_catab_astC succi 100.0 1.9E-56 4.1E-61 504.8 37.2 344 375-808 17-396 (397)
59 PRK03715 argD acetylornithine 100.0 2E-56 4.4E-61 503.7 35.1 342 375-808 18-394 (395)
60 COG0001 HemL Glutamate-1-semia 100.0 2.5E-56 5.4E-61 489.3 33.6 375 350-809 7-430 (432)
61 PLN00144 acetylornithine trans 100.0 2.6E-56 5.6E-61 501.0 34.5 343 380-808 2-381 (382)
62 PRK07046 aminotransferase; Val 100.0 1.5E-55 3.2E-60 503.7 39.9 383 336-809 16-452 (453)
63 PLN02482 glutamate-1-semialdeh 100.0 2.3E-55 5E-60 503.3 36.7 345 375-807 81-473 (474)
64 PRK12381 bifunctional succinyl 100.0 6.2E-55 1.3E-59 493.9 36.8 346 375-810 21-402 (406)
65 PF00202 Aminotran_3: Aminotra 100.0 3.7E-56 8.1E-61 492.0 25.2 304 378-748 1-339 (339)
66 TIGR03251 LAT_fam L-lysine 6-t 100.0 6.8E-55 1.5E-59 496.6 36.0 357 379-803 23-430 (431)
67 PRK00615 glutamate-1-semialdeh 100.0 1.4E-54 3E-59 492.8 37.5 349 374-808 34-429 (433)
68 PLN02624 ornithine-delta-amino 100.0 1.6E-53 3.5E-58 490.4 39.6 351 376-809 58-446 (474)
69 PRK04073 rocD ornithine--oxo-a 100.0 3.8E-51 8.3E-56 461.5 36.0 339 375-805 22-395 (396)
70 PRK01278 argD acetylornithine 100.0 1.6E-50 3.4E-55 455.3 36.6 339 375-807 13-388 (389)
71 KOG1403 Predicted alanine-glyo 100.0 7.7E-52 1.7E-56 424.7 22.0 370 374-809 28-439 (452)
72 PRK08088 4-aminobutyrate amino 100.0 5.8E-50 1.3E-54 455.9 39.3 363 375-808 23-424 (425)
73 PRK00062 glutamate-1-semialdeh 100.0 8.5E-50 1.8E-54 454.5 35.6 350 375-808 32-425 (426)
74 PRK05093 argD bifunctional N-s 100.0 2.6E-49 5.6E-54 447.6 37.2 344 375-808 22-401 (403)
75 TIGR00713 hemL glutamate-1-sem 100.0 1.9E-49 4.1E-54 451.4 35.9 350 375-808 30-423 (423)
76 TIGR01885 Orn_aminotrans ornit 100.0 2.4E-49 5.1E-54 447.6 36.3 346 376-805 20-400 (401)
77 PRK06209 glutamate-1-semialdeh 100.0 7.9E-48 1.7E-52 438.6 35.9 336 374-810 29-408 (431)
78 PRK02936 argD acetylornithine 100.0 1.1E-47 2.5E-52 430.0 35.8 331 375-805 11-377 (377)
79 PRK03244 argD acetylornithine 100.0 1.4E-47 3.1E-52 432.3 36.3 338 375-809 25-396 (398)
80 PRK00854 rocD ornithine--oxo-a 100.0 6.2E-47 1.3E-51 427.6 36.9 342 376-806 24-400 (401)
81 PTZ00125 ornithine aminotransf 100.0 1.6E-46 3.6E-51 423.7 37.6 348 375-809 13-397 (400)
82 PRK04260 acetylornithine amino 100.0 7.2E-45 1.6E-49 407.5 34.2 328 375-804 11-374 (375)
83 PRK02627 acetylornithine amino 100.0 1.2E-44 2.5E-49 407.7 36.0 350 357-808 10-395 (396)
84 cd00610 OAT_like Acetyl ornith 100.0 2.4E-44 5.2E-49 407.0 37.4 373 355-805 3-413 (413)
85 KOG1405 4-aminobutyrate aminot 100.0 2.5E-42 5.3E-47 361.6 24.0 374 381-807 64-483 (484)
86 COG0132 BioD Dethiobiotin synt 100.0 1.2E-39 2.6E-44 334.5 19.8 198 36-317 1-208 (223)
87 TIGR00707 argD acetylornithine 100.0 4.4E-37 9.6E-42 344.0 34.2 336 375-805 9-379 (379)
88 PF13500 AAA_26: AAA domain; P 100.0 1.7E-35 3.8E-40 303.2 16.7 197 38-320 1-199 (199)
89 PRK07505 hypothetical protein; 100.0 2.5E-32 5.5E-37 309.0 26.4 318 377-807 30-399 (402)
90 PRK12374 putative dithiobiotin 100.0 1.3E-31 2.9E-36 281.0 20.5 203 36-326 1-216 (231)
91 PRK13393 5-aminolevulinate syn 100.0 4.6E-30 1E-34 290.9 25.3 298 400-809 46-398 (406)
92 PRK00090 bioD dithiobiotin syn 100.0 4.1E-30 9E-35 267.8 22.1 203 39-325 1-214 (222)
93 PLN02955 8-amino-7-oxononanoat 100.0 1.9E-29 4.1E-34 285.7 24.3 311 400-809 103-463 (476)
94 COG0156 BioF 7-keto-8-aminopel 100.0 6.4E-29 1.4E-33 275.6 25.4 296 393-804 37-387 (388)
95 PLN02822 serine palmitoyltrans 100.0 1.7E-28 3.8E-33 283.2 27.5 324 377-808 94-478 (481)
96 TIGR01821 5aminolev_synth 5-am 100.0 3.1E-28 6.7E-33 275.5 26.5 300 393-808 43-397 (402)
97 PRK09064 5-aminolevulinate syn 100.0 4.3E-28 9.4E-33 274.6 26.3 298 400-809 47-399 (407)
98 PLN03227 serine palmitoyltrans 99.9 2.3E-26 5E-31 259.5 24.2 313 402-809 1-384 (392)
99 PRK00784 cobyric acid synthase 99.9 8.7E-27 1.9E-31 269.3 17.5 201 36-320 1-234 (488)
100 PRK07179 hypothetical protein; 99.9 1.6E-24 3.5E-29 245.6 26.9 305 375-809 44-400 (407)
101 KOG1359 Glycine C-acetyltransf 99.9 3.7E-24 8.1E-29 220.6 21.9 310 377-808 50-413 (417)
102 PRK13392 5-aminolevulinate syn 99.9 1E-23 2.2E-28 239.3 24.9 302 393-808 44-398 (410)
103 TIGR00347 bioD dethiobiotin sy 99.9 8.9E-24 1.9E-28 210.2 18.4 165 41-287 1-166 (166)
104 TIGR00313 cobQ cobyric acid sy 99.9 2.7E-24 5.8E-29 247.2 16.4 194 40-316 1-227 (475)
105 PRK06278 cobyrinic acid a,c-di 99.9 7E-24 1.5E-28 241.4 19.4 175 33-312 234-418 (476)
106 TIGR01825 gly_Cac_T_rel pyrido 99.9 9.9E-23 2.1E-27 228.7 27.3 314 376-808 17-382 (385)
107 PRK05937 8-amino-7-oxononanoat 99.9 7.5E-23 1.6E-27 229.3 24.1 300 400-809 5-352 (370)
108 PRK05958 8-amino-7-oxononanoat 99.9 3E-22 6.6E-27 224.1 28.8 309 378-805 25-385 (385)
109 COG1797 CobB Cobyrinic acid a, 99.9 2.1E-23 4.5E-28 228.4 18.3 176 38-319 1-185 (451)
110 PRK13896 cobyrinic acid a,c-di 99.9 3.1E-23 6.6E-28 233.9 18.8 174 37-319 1-181 (433)
111 COG1492 CobQ Cobyric acid synt 99.9 9.3E-25 2E-29 243.3 6.0 216 37-316 1-230 (486)
112 TIGR00379 cobB cobyrinic acid 99.9 1.6E-22 3.4E-27 231.6 19.1 172 39-319 1-184 (449)
113 PRK01077 cobyrinic acid a,c-di 99.9 1.8E-22 3.8E-27 231.5 18.3 178 36-319 2-187 (451)
114 TIGR01822 2am3keto_CoA 2-amino 99.9 1.4E-20 3E-25 212.1 27.6 316 378-808 23-390 (393)
115 PRK06939 2-amino-3-ketobutyrat 99.9 2.2E-20 4.9E-25 210.0 27.7 316 378-808 27-394 (397)
116 KOG1360 5-aminolevulinate synt 99.9 5.1E-22 1.1E-26 211.9 13.1 291 410-809 179-526 (570)
117 PLN02483 serine palmitoyltrans 99.9 7.1E-20 1.5E-24 212.2 30.3 303 400-809 101-468 (489)
118 cd03109 DTBS Dethiobiotin synt 99.9 7.4E-21 1.6E-25 183.1 15.2 88 222-311 40-134 (134)
119 PRK05632 phosphate acetyltrans 99.9 4.3E-21 9.3E-26 230.1 16.7 187 36-331 1-214 (684)
120 TIGR00858 bioF 8-amino-7-oxono 99.9 1.3E-19 2.8E-24 200.7 26.8 304 380-802 4-360 (360)
121 cd06454 KBL_like KBL_like; thi 99.8 1.1E-17 2.3E-22 184.9 25.1 296 399-804 1-348 (349)
122 cd00613 GDC-P Glycine cleavage 99.7 2.6E-16 5.6E-21 177.6 23.8 293 406-801 23-398 (398)
123 KOG1357 Serine palmitoyltransf 99.6 2E-15 4.4E-20 164.6 15.7 325 377-807 116-502 (519)
124 TIGR03576 pyridox_MJ0158 pyrid 99.6 3.5E-14 7.5E-19 158.0 21.3 194 410-713 27-226 (346)
125 PLN02721 threonine aldolase 99.6 1.1E-13 2.5E-18 153.2 25.4 306 400-807 6-352 (353)
126 TIGR02539 SepCysS Sep-tRNA:Cys 99.6 1.5E-13 3.3E-18 154.2 21.4 295 420-807 19-368 (370)
127 PRK09331 Sep-tRNA:Cys-tRNA syn 99.6 5.5E-13 1.2E-17 150.6 25.7 305 411-808 27-382 (387)
128 cd00609 AAT_like Aspartate ami 99.6 2.2E-13 4.8E-18 149.4 20.8 173 617-802 130-349 (350)
129 PRK13520 L-tyrosine decarboxyl 99.5 1.1E-12 2.3E-17 146.5 25.2 289 414-806 30-370 (371)
130 PRK03317 histidinol-phosphate 99.5 1.6E-12 3.5E-17 145.6 25.4 294 401-806 28-363 (368)
131 PRK13034 serine hydroxymethylt 99.5 1.5E-12 3.2E-17 148.5 24.8 286 418-808 41-393 (416)
132 PRK06225 aspartate aminotransf 99.5 4E-12 8.6E-17 143.1 26.0 305 400-809 29-378 (380)
133 COG0857 Pta BioD-like N-termin 99.5 1.6E-13 3.4E-18 151.1 13.7 198 36-322 1-212 (354)
134 cd06502 TA_like Low-specificit 99.5 6.2E-12 1.3E-16 138.5 24.5 292 403-803 1-337 (338)
135 TIGR03402 FeS_nifS cysteine de 99.4 6.8E-11 1.5E-15 132.9 26.2 298 401-809 2-374 (379)
136 PRK06108 aspartate aminotransf 99.4 1.3E-10 2.8E-15 130.6 26.3 306 400-806 25-381 (382)
137 PRK02731 histidinol-phosphate 99.4 8.8E-11 1.9E-15 131.4 23.5 292 400-806 33-365 (367)
138 cd06451 AGAT_like Alanine-glyo 99.3 7E-11 1.5E-15 131.4 21.6 280 418-805 11-355 (356)
139 PRK07682 hypothetical protein; 99.3 2E-10 4.4E-15 129.1 25.5 293 418-808 35-377 (378)
140 TIGR01141 hisC histidinol-phos 99.3 8.1E-11 1.8E-15 130.5 21.6 284 400-801 20-345 (346)
141 TIGR03301 PhnW-AepZ 2-aminoeth 99.3 2.5E-10 5.4E-15 126.4 24.0 283 418-805 11-355 (355)
142 cd06453 SufS_like Cysteine des 99.3 7.1E-10 1.5E-14 124.2 26.9 284 412-801 7-373 (373)
143 PF00155 Aminotran_1_2: Aminot 99.3 3.2E-10 7E-15 126.2 23.7 182 602-801 133-363 (363)
144 KOG1358 Serine palmitoyltransf 99.3 6.6E-11 1.4E-15 127.8 17.1 324 376-807 78-465 (467)
145 TIGR03392 FeS_syn_CsdA cystein 99.3 1.5E-09 3.2E-14 123.0 29.2 299 400-808 18-396 (398)
146 PRK03158 histidinol-phosphate 99.3 2.4E-10 5.1E-15 127.6 22.2 289 400-804 30-358 (359)
147 cd06452 SepCysS Sep-tRNA:Cys-t 99.3 4.3E-10 9.4E-15 125.7 24.1 300 414-805 11-360 (361)
148 PRK10874 cysteine sulfinate de 99.3 1.3E-09 2.9E-14 123.5 28.3 298 400-808 21-399 (401)
149 PRK08153 histidinol-phosphate 99.3 2.6E-10 5.5E-15 128.1 21.9 295 400-809 33-367 (369)
150 PRK10534 L-threonine aldolase; 99.3 3.3E-10 7.1E-15 125.1 21.8 292 401-805 1-331 (333)
151 PRK00950 histidinol-phosphate 99.3 6.9E-10 1.5E-14 123.8 23.7 288 400-805 35-360 (361)
152 PRK02948 cysteine desulfurase; 99.2 9.6E-10 2.1E-14 123.7 24.4 299 400-808 2-375 (381)
153 TIGR01814 kynureninase kynuren 99.2 1.1E-09 2.5E-14 124.4 25.2 179 602-805 159-405 (406)
154 TIGR03812 tyr_de_CO2_Arch tyro 99.2 1.6E-09 3.4E-14 121.3 24.7 286 418-803 33-372 (373)
155 PRK05764 aspartate aminotransf 99.2 1.5E-09 3.2E-14 122.7 24.6 310 400-807 32-391 (393)
156 COG2008 GLY1 Threonine aldolas 99.2 1.2E-09 2.5E-14 118.5 22.4 296 402-805 2-341 (342)
157 TIGR01979 sufS cysteine desulf 99.2 4.8E-09 1E-13 118.8 28.6 169 619-808 159-402 (403)
158 cd00616 AHBA_syn 3-amino-5-hyd 99.2 1E-09 2.3E-14 121.5 22.3 252 442-802 17-352 (352)
159 TIGR02006 IscS cysteine desulf 99.2 4.4E-09 9.5E-14 119.5 26.9 207 400-707 5-220 (402)
160 cd00614 CGS_like CGS_like: Cys 99.2 4E-10 8.7E-15 126.6 18.1 171 440-712 37-211 (369)
161 TIGR01976 am_tr_V_VC1184 cyste 99.2 4.8E-09 1E-13 118.6 26.8 288 400-801 19-397 (397)
162 TIGR01437 selA_rel uncharacter 99.2 6.7E-09 1.4E-13 116.6 27.6 301 400-804 9-362 (363)
163 PRK07324 transaminase; Validat 99.2 1.7E-09 3.7E-14 121.7 22.7 177 619-808 153-371 (373)
164 TIGR01977 am_tr_V_EF2568 cyste 99.2 5.3E-09 1.2E-13 117.2 26.4 279 418-803 13-375 (376)
165 PRK06207 aspartate aminotransf 99.2 1.1E-08 2.3E-13 116.5 28.5 318 394-809 34-404 (405)
166 PRK09295 bifunctional cysteine 99.2 1E-08 2.2E-13 116.6 28.3 299 400-805 25-402 (406)
167 PLN03226 serine hydroxymethylt 99.2 3.7E-09 8E-14 122.4 24.0 180 602-808 173-420 (475)
168 cd06450 DOPA_deC_like DOPA dec 99.2 3.4E-09 7.3E-14 117.2 22.3 285 441-803 36-344 (345)
169 TIGR01325 O_suc_HS_sulf O-succ 99.2 1.1E-09 2.5E-14 123.5 18.7 172 439-712 50-224 (380)
170 PRK08960 hypothetical protein; 99.1 1.8E-08 3.9E-13 113.8 27.9 289 418-805 47-385 (387)
171 PRK00011 glyA serine hydroxyme 99.1 1.4E-08 3.1E-13 115.8 26.4 179 602-807 155-389 (416)
172 PRK07777 aminotransferase; Val 99.1 1.7E-08 3.8E-13 113.9 26.8 305 400-805 25-384 (387)
173 PRK15481 transcriptional regul 99.1 2.7E-08 5.8E-13 114.2 28.4 182 602-806 202-430 (431)
174 PRK07550 hypothetical protein; 99.1 1.4E-08 3.1E-13 114.5 25.3 302 400-804 30-384 (386)
175 PLN02855 Bifunctional selenocy 99.1 2.4E-08 5.2E-13 114.2 27.3 299 400-809 34-420 (424)
176 PLN00175 aminotransferase fami 99.1 2.8E-08 6.1E-13 113.5 27.6 304 400-806 55-412 (413)
177 TIGR02326 transamin_PhnW 2-ami 99.1 1.1E-08 2.3E-13 114.5 23.7 161 630-806 139-361 (363)
178 KOG1368 Threonine aldolase [Am 99.1 6E-09 1.3E-13 109.3 19.4 185 602-804 137-365 (384)
179 PRK08361 aspartate aminotransf 99.1 2.1E-08 4.6E-13 113.4 25.3 306 400-807 34-390 (391)
180 PRK13238 tnaA tryptophanase/L- 99.1 4.7E-08 1E-12 113.0 28.3 201 602-809 164-435 (460)
181 PRK07309 aromatic amino acid a 99.1 6.8E-08 1.5E-12 109.4 28.9 307 400-808 31-389 (391)
182 PRK09082 methionine aminotrans 99.1 2.6E-08 5.7E-13 112.5 25.2 302 400-803 31-385 (386)
183 PRK14012 cysteine desulfurase; 99.1 4.2E-08 9.1E-13 111.5 26.8 204 400-706 5-221 (404)
184 PRK07568 aspartate aminotransf 99.1 6.7E-08 1.4E-12 109.4 28.1 176 619-809 162-394 (397)
185 PRK07681 aspartate aminotransf 99.1 2.5E-08 5.5E-13 113.1 24.7 300 400-803 33-384 (399)
186 TIGR03403 nifS_epsilon cystein 99.0 8.9E-08 1.9E-12 107.9 28.2 170 619-810 140-378 (382)
187 TIGR03537 DapC succinyldiamino 99.0 5.5E-08 1.2E-12 108.4 25.7 302 401-803 2-349 (350)
188 cd00378 SHMT Serine-glycine hy 99.0 2.6E-08 5.7E-13 112.8 23.1 154 643-809 178-387 (402)
189 PRK05957 aspartate aminotransf 99.0 4.9E-08 1.1E-12 110.5 25.2 292 418-808 42-386 (389)
190 PRK03321 putative aminotransfe 99.0 1.5E-08 3.3E-13 112.8 20.4 168 619-806 145-350 (352)
191 PRK08068 transaminase; Reviewe 99.0 6.3E-08 1.4E-12 109.5 25.5 300 400-803 33-385 (389)
192 PRK06767 methionine gamma-lyas 99.0 7.9E-09 1.7E-13 117.0 17.5 139 619-775 146-329 (386)
193 COG0436 Aspartate/tyrosine/aro 99.0 4.6E-08 9.9E-13 110.9 23.6 291 418-808 43-392 (393)
194 PLN02242 methionine gamma-lyas 99.0 2.6E-08 5.7E-13 113.8 21.2 172 440-712 73-247 (418)
195 PRK09148 aminotransferase; Val 99.0 7.5E-08 1.6E-12 109.6 24.8 313 400-812 31-395 (405)
196 TIGR01140 L_thr_O3P_dcar L-thr 99.0 1.5E-08 3.4E-13 112.0 18.5 161 621-801 128-329 (330)
197 PRK08912 hypothetical protein; 99.0 1.1E-07 2.5E-12 107.3 25.8 305 400-806 27-385 (387)
198 TIGR03540 DapC_direct LL-diami 99.0 1.1E-07 2.4E-12 107.2 25.4 299 400-802 30-381 (383)
199 PRK07683 aminotransferase A; V 99.0 1.8E-07 3.8E-12 105.9 27.1 305 400-807 29-383 (387)
200 PRK09105 putative aminotransfe 99.0 7.6E-08 1.6E-12 108.3 24.0 288 400-805 44-368 (370)
201 PRK08056 threonine-phosphate d 99.0 2.2E-07 4.7E-12 103.9 27.1 170 619-805 142-353 (356)
202 TIGR01324 cysta_beta_ly_B cyst 99.0 1.6E-08 3.4E-13 114.1 17.9 225 440-772 47-321 (377)
203 PRK13479 2-aminoethylphosphona 99.0 9.5E-08 2.1E-12 107.0 24.1 286 418-809 17-365 (368)
204 PRK13355 bifunctional HTH-doma 99.0 1.2E-07 2.6E-12 111.4 25.9 314 400-808 147-515 (517)
205 PRK12414 putative aminotransfe 99.0 2.4E-07 5.1E-12 104.7 27.0 301 400-803 30-383 (384)
206 PRK06836 aspartate aminotransf 99.0 3.9E-07 8.5E-12 103.3 28.7 173 619-808 168-392 (394)
207 PRK08175 aminotransferase; Val 99.0 1.4E-07 2.9E-12 107.1 24.9 190 602-807 152-389 (395)
208 PRK08636 aspartate aminotransf 98.9 3.4E-07 7.4E-12 104.1 28.1 315 400-808 34-401 (403)
209 PRK08363 alanine aminotransfer 98.9 3.3E-07 7.2E-12 103.9 27.9 309 400-807 31-394 (398)
210 PRK06348 aspartate aminotransf 98.9 2E-07 4.4E-12 105.2 26.1 172 620-803 163-381 (384)
211 PRK07865 N-succinyldiaminopime 98.9 1.6E-07 3.5E-12 105.2 25.0 169 618-802 147-363 (364)
212 PRK09276 LL-diaminopimelate am 98.9 1.5E-07 3.1E-12 106.3 24.7 170 619-802 166-383 (385)
213 PRK06107 aspartate aminotransf 98.9 2.9E-07 6.3E-12 104.7 27.2 314 400-808 34-401 (402)
214 PRK04366 glycine dehydrogenase 98.9 1.2E-07 2.6E-12 110.4 24.1 303 418-816 83-457 (481)
215 PRK14807 histidinol-phosphate 98.9 1.6E-07 3.5E-12 104.7 24.3 275 418-805 37-350 (351)
216 PRK02610 histidinol-phosphate 98.9 1.2E-07 2.6E-12 106.7 23.4 172 618-808 167-372 (374)
217 PRK01533 histidinol-phosphate 98.9 9.1E-08 2E-12 107.6 22.0 292 400-808 30-356 (366)
218 TIGR03539 DapC_actino succinyl 98.9 1.9E-07 4.1E-12 104.4 24.5 285 400-801 22-356 (357)
219 PRK13580 serine hydroxymethylt 98.9 1E-07 2.2E-12 109.5 22.2 182 602-808 210-446 (493)
220 PLN02656 tyrosine transaminase 98.9 6.1E-07 1.3E-11 102.3 28.1 315 400-808 32-404 (409)
221 TIGR01326 OAH_OAS_sulfhy OAH/O 98.9 3.5E-08 7.6E-13 112.9 17.9 163 440-705 54-219 (418)
222 PRK06290 aspartate aminotransf 98.9 3.1E-07 6.8E-12 104.8 25.5 313 400-809 45-407 (410)
223 PTZ00094 serine hydroxymethylt 98.9 1.7E-07 3.7E-12 108.3 23.4 178 602-807 172-408 (452)
224 PRK12566 glycine dehydrogenase 98.9 1.4E-07 3E-12 114.7 23.3 279 441-813 541-882 (954)
225 cd01494 AAT_I Aspartate aminot 98.9 2.9E-08 6.3E-13 97.0 14.5 165 446-703 3-169 (170)
226 PRK07366 succinyldiaminopimela 98.9 2.2E-07 4.7E-12 105.0 23.2 305 400-804 31-387 (388)
227 PLN00145 tyrosine/nicotianamin 98.9 8E-07 1.7E-11 102.1 28.1 317 400-809 53-426 (430)
228 COG1104 NifS Cysteine sulfinat 98.9 2.3E-07 4.9E-12 102.9 22.5 305 400-811 3-381 (386)
229 PRK06234 methionine gamma-lyas 98.9 1.1E-07 2.4E-12 108.2 20.6 171 440-712 61-236 (400)
230 PRK14809 histidinol-phosphate 98.9 4.6E-07 9.9E-12 101.3 25.3 164 621-806 156-356 (357)
231 TIGR00474 selA seryl-tRNA(sec) 98.9 7.3E-07 1.6E-11 102.7 27.4 193 418-712 94-309 (454)
232 COG0520 csdA Selenocysteine ly 98.9 9.7E-07 2.1E-11 100.4 27.7 300 400-806 24-404 (405)
233 PRK05387 histidinol-phosphate 98.9 2.6E-07 5.7E-12 102.8 22.8 162 622-806 148-352 (353)
234 PLN03026 histidinol-phosphate 98.9 2.9E-07 6.4E-12 103.9 23.2 287 400-803 53-378 (380)
235 PRK05664 threonine-phosphate d 98.9 2.5E-07 5.3E-12 102.5 22.1 165 621-807 127-328 (330)
236 PRK05994 O-acetylhomoserine am 98.9 1.2E-07 2.6E-12 108.8 20.2 161 440-703 60-223 (427)
237 PTZ00433 tyrosine aminotransfe 98.9 8.8E-07 1.9E-11 101.1 27.0 321 390-809 28-410 (412)
238 PRK06358 threonine-phosphate d 98.8 2.9E-07 6.2E-12 103.0 22.2 290 400-805 20-353 (354)
239 PRK09147 succinyldiaminopimela 98.8 1.2E-06 2.7E-11 99.3 27.6 302 400-805 30-394 (396)
240 TIGR01328 met_gam_lyase methio 98.8 1.1E-07 2.4E-12 107.8 19.0 170 440-712 56-229 (391)
241 PRK08133 O-succinylhomoserine 98.8 1.5E-07 3.2E-12 106.8 19.9 81 619-710 146-229 (390)
242 PRK06855 aminotransferase; Val 98.8 9.2E-07 2E-11 101.7 26.7 302 418-808 50-430 (433)
243 PRK06425 histidinol-phosphate 98.8 3.2E-07 7E-12 101.6 21.7 165 622-805 126-331 (332)
244 PRK05942 aspartate aminotransf 98.8 8.4E-07 1.8E-11 100.6 25.4 219 400-712 36-266 (394)
245 PRK04870 histidinol-phosphate 98.8 4E-07 8.7E-12 101.6 22.4 289 400-804 27-355 (356)
246 PLN02409 serine--glyoxylate am 98.8 3.2E-07 7E-12 104.4 21.9 287 418-809 21-374 (401)
247 PRK09265 aminotransferase AlaT 98.8 1.1E-06 2.3E-11 100.0 26.2 312 400-808 34-402 (404)
248 COG0079 HisC Histidinol-phosph 98.8 9.5E-07 2.1E-11 98.8 24.9 289 400-807 23-354 (356)
249 PRK07337 aminotransferase; Val 98.8 1.5E-06 3.3E-11 98.2 26.6 174 621-805 166-387 (388)
250 PRK08249 cystathionine gamma-s 98.8 1.8E-07 3.9E-12 106.3 19.1 171 439-711 60-233 (398)
251 PRK04311 selenocysteine syntha 98.8 2.4E-06 5.1E-11 98.8 28.3 279 418-806 99-463 (464)
252 PRK08354 putative aminotransfe 98.8 8.8E-07 1.9E-11 97.2 23.8 270 400-804 9-309 (311)
253 PF00266 Aminotran_5: Aminotra 98.8 4.4E-07 9.6E-12 101.8 21.5 284 412-797 7-371 (371)
254 PLN00143 tyrosine/nicotianamin 98.8 4.6E-06 1E-10 95.2 30.1 296 418-808 51-405 (409)
255 TIGR01264 tyr_amTase_E tyrosin 98.8 2.4E-06 5.3E-11 97.0 27.7 178 621-807 170-399 (401)
256 PRK08574 cystathionine gamma-s 98.8 2.3E-07 4.9E-12 105.1 19.0 169 440-711 50-222 (385)
257 PRK06084 O-acetylhomoserine am 98.8 2.7E-07 5.9E-12 105.7 19.1 162 440-703 55-218 (425)
258 PRK06959 putative threonine-ph 98.8 5.7E-07 1.2E-11 100.0 20.7 169 621-811 133-337 (339)
259 PRK05367 glycine dehydrogenase 98.7 1.1E-06 2.4E-11 109.1 25.0 278 442-812 541-880 (954)
260 PLN02414 glycine dehydrogenase 98.7 1.7E-06 3.6E-11 107.2 26.2 280 442-812 567-912 (993)
261 PLN02187 rooty/superroot1 98.7 2E-06 4.4E-11 99.7 25.6 300 419-811 86-442 (462)
262 PRK07392 threonine-phosphate d 98.7 1.3E-06 2.8E-11 97.8 23.2 165 620-805 150-357 (360)
263 PLN02651 cysteine desulfurase 98.7 7.8E-07 1.7E-11 99.7 21.4 209 401-709 2-218 (364)
264 TIGR03538 DapC_gpp succinyldia 98.7 4.4E-06 9.5E-11 94.7 27.2 300 400-804 29-392 (393)
265 PRK07810 O-succinylhomoserine 98.7 4.5E-07 9.7E-12 103.3 19.0 206 440-748 67-324 (403)
266 PRK11658 UDP-4-amino-4-deoxy-L 98.7 8.9E-07 1.9E-11 100.1 21.3 182 419-709 14-201 (379)
267 PTZ00376 aspartate aminotransf 98.7 1.8E-06 3.9E-11 98.3 23.9 180 602-806 164-402 (404)
268 cd00617 Tnase_like Tryptophana 98.7 1.7E-06 3.7E-11 99.1 23.2 199 602-811 139-412 (431)
269 PRK08045 cystathionine gamma-s 98.7 6.9E-07 1.5E-11 101.2 19.8 170 440-711 49-222 (386)
270 PRK05968 hypothetical protein; 98.7 8.3E-07 1.8E-11 100.7 20.5 135 620-774 148-329 (389)
271 COG1167 ARO8 Transcriptional r 98.7 4.7E-06 1E-10 96.6 27.0 309 400-809 90-457 (459)
272 PRK08247 cystathionine gamma-s 98.7 8.7E-07 1.9E-11 99.7 20.3 205 439-747 48-288 (366)
273 PRK06460 hypothetical protein; 98.7 7.6E-07 1.6E-11 100.6 19.9 84 618-712 129-215 (376)
274 PRK07503 methionine gamma-lyas 98.7 1E-06 2.2E-11 100.4 21.0 83 619-712 150-235 (403)
275 TIGR02379 ECA_wecE TDP-4-keto- 98.7 1.7E-06 3.7E-11 97.7 22.6 187 419-710 11-202 (376)
276 TIGR00461 gcvP glycine dehydro 98.7 1.9E-06 4.2E-11 105.5 24.3 279 442-812 529-872 (939)
277 PRK07582 cystathionine gamma-l 98.7 1.6E-06 3.6E-11 97.5 22.1 160 619-802 132-364 (366)
278 TIGR03588 PseC UDP-4-keto-6-de 98.7 3E-06 6.5E-11 95.6 24.3 187 419-709 10-204 (380)
279 PLN02376 1-aminocyclopropane-1 98.7 3.5E-06 7.5E-11 98.5 25.4 186 618-809 198-440 (496)
280 PLN02607 1-aminocyclopropane-1 98.7 4.5E-06 9.8E-11 96.4 26.0 185 617-809 198-439 (447)
281 TIGR01265 tyr_nico_aTase tyros 98.7 5.2E-06 1.1E-10 94.5 26.0 178 621-807 172-401 (403)
282 PRK05839 hypothetical protein; 98.7 8.6E-06 1.9E-10 91.8 27.5 298 400-806 25-373 (374)
283 PRK07050 cystathionine beta-ly 98.7 9.5E-07 2.1E-11 100.4 19.2 171 439-711 61-235 (394)
284 PRK05166 histidinol-phosphate 98.7 3.3E-06 7.1E-11 95.0 23.4 290 400-805 37-369 (371)
285 PLN02509 cystathionine beta-ly 98.7 6.1E-07 1.3E-11 103.6 17.6 64 619-693 217-282 (464)
286 PTZ00377 alanine aminotransfer 98.7 5.1E-06 1.1E-10 96.9 25.6 310 418-811 90-479 (481)
287 PRK09257 aromatic amino acid a 98.6 3.7E-06 8E-11 95.4 23.1 220 400-702 27-259 (396)
288 PRK07049 methionine gamma-lyas 98.6 1.4E-06 3E-11 100.0 19.8 179 440-712 80-265 (427)
289 TIGR01329 cysta_beta_ly_E cyst 98.6 1.4E-06 3.1E-11 98.4 19.5 142 618-778 130-322 (378)
290 PRK11706 TDP-4-oxo-6-deoxy-D-g 98.6 1.7E-06 3.7E-11 97.6 20.1 184 420-709 12-200 (375)
291 PRK07504 O-succinylhomoserine 98.6 1.2E-06 2.5E-11 99.8 18.6 79 619-709 150-232 (398)
292 PRK01688 histidinol-phosphate 98.6 1.1E-06 2.3E-11 98.2 17.9 159 622-801 149-350 (351)
293 PRK07908 hypothetical protein; 98.6 5.9E-06 1.3E-10 92.1 23.5 162 620-806 140-346 (349)
294 PRK14808 histidinol-phosphate 98.6 3.3E-06 7.2E-11 93.7 21.4 160 621-803 141-333 (335)
295 PRK06176 cystathionine gamma-s 98.6 1.5E-06 3.2E-11 98.3 18.8 80 619-709 134-217 (380)
296 PLN02450 1-aminocyclopropane-1 98.6 7.4E-06 1.6E-10 95.2 24.9 184 618-809 190-432 (468)
297 PRK07811 cystathionine gamma-s 98.6 1.4E-06 3.1E-11 98.7 18.4 168 440-709 58-229 (388)
298 PRK08861 cystathionine gamma-s 98.6 1.8E-06 3.9E-11 97.8 19.0 168 440-710 50-222 (388)
299 PRK00451 glycine dehydrogenase 98.6 4.8E-06 1E-10 96.1 22.9 46 760-805 393-446 (447)
300 PRK04781 histidinol-phosphate 98.6 3.6E-06 7.8E-11 94.5 21.4 167 619-805 152-361 (364)
301 PLN02672 methionine S-methyltr 98.6 8E-06 1.7E-10 101.6 26.0 319 388-806 690-1079(1082)
302 TIGR03542 DAPAT_plant LL-diami 98.6 6.2E-06 1.3E-10 93.8 23.5 172 619-804 173-401 (402)
303 PRK07590 L,L-diaminopimelate a 98.6 1.8E-05 3.9E-10 90.2 27.2 171 619-804 176-408 (409)
304 PLN02231 alanine transaminase 98.6 1.1E-05 2.3E-10 95.2 25.7 311 418-812 142-532 (534)
305 PRK07812 O-acetylhomoserine am 98.6 3.8E-06 8.3E-11 96.5 20.5 153 440-693 66-220 (436)
306 PRK08064 cystathionine beta-ly 98.5 4.5E-06 9.8E-11 94.7 20.6 81 619-711 138-223 (390)
307 TIGR02080 O_succ_thio_ly O-suc 98.5 2.7E-06 5.8E-11 96.3 18.4 171 439-711 47-221 (382)
308 PRK09028 cystathionine beta-ly 98.5 3.7E-06 8.1E-11 95.3 19.3 259 441-811 59-391 (394)
309 TIGR01969 minD_arch cell divis 98.5 2E-06 4.4E-11 90.8 15.9 102 193-316 94-200 (251)
310 COG0075 Serine-pyruvate aminot 98.5 1E-05 2.2E-10 90.4 21.5 291 418-809 17-365 (383)
311 PRK09440 avtA valine--pyruvate 98.5 2.9E-05 6.3E-10 88.6 25.8 175 621-809 182-413 (416)
312 PRK07269 cystathionine gamma-s 98.5 3.8E-06 8.2E-11 94.5 18.2 203 440-747 51-288 (364)
313 PRK08776 cystathionine gamma-s 98.5 8.7E-06 1.9E-10 92.9 21.0 82 619-711 145-230 (405)
314 PF01041 DegT_DnrJ_EryC1: DegT 98.5 1.3E-05 2.8E-10 90.1 21.9 185 419-709 5-194 (363)
315 TIGR01788 Glu-decarb-GAD gluta 98.5 3.5E-05 7.6E-10 88.5 25.6 303 415-808 52-430 (431)
316 PRK08248 O-acetylhomoserine am 98.5 6.3E-06 1.4E-10 94.7 19.5 162 440-703 61-224 (431)
317 TIGR02618 tyr_phenol_ly tyrosi 98.5 1E-05 2.2E-10 92.1 20.5 200 602-810 157-429 (450)
318 TIGR03235 DNA_S_dndA cysteine 98.5 2.3E-06 5E-11 95.3 15.4 202 413-707 7-216 (353)
319 TIGR01007 eps_fam capsular exo 98.5 1.5E-06 3.1E-11 89.6 12.5 76 195-289 115-190 (204)
320 PRK05967 cystathionine beta-ly 98.5 8.8E-06 1.9E-10 92.3 19.6 171 439-711 60-233 (395)
321 PLN02880 tyrosine decarboxylas 98.4 4E-05 8.8E-10 89.5 25.0 297 442-809 121-486 (490)
322 PRK08114 cystathionine beta-ly 98.4 8.7E-06 1.9E-10 92.3 18.9 208 439-748 58-317 (395)
323 PRK04635 histidinol-phosphate 98.4 7.7E-06 1.7E-10 91.4 18.0 163 620-803 148-351 (354)
324 PF01053 Cys_Met_Meta_PP: Cys/ 98.4 6.3E-06 1.4E-10 93.2 17.1 221 439-768 51-324 (386)
325 PRK15407 lipopolysaccharide bi 98.4 4E-06 8.6E-11 96.6 15.2 185 422-706 47-236 (438)
326 COG1168 MalY Bifunctional PLP- 98.4 9E-05 2E-09 81.4 24.6 185 602-807 148-386 (388)
327 CHL00175 minD septum-site dete 98.4 3.6E-06 7.9E-11 91.0 14.0 88 221-317 127-223 (281)
328 cd02037 MRP-like MRP (Multiple 98.4 1.7E-05 3.8E-10 79.1 17.8 89 220-314 67-169 (169)
329 PRK03967 histidinol-phosphate 98.4 3.8E-05 8.2E-10 85.4 22.1 152 622-806 144-333 (337)
330 COG1103 Archaea-specific pyrid 98.3 8.3E-06 1.8E-10 85.1 14.2 270 442-807 60-380 (382)
331 PLN03032 serine decarboxylase; 98.3 0.00011 2.3E-09 83.0 23.9 179 442-711 65-255 (374)
332 PRK02769 histidine decarboxyla 98.3 0.00017 3.7E-09 81.6 25.7 256 442-807 64-372 (380)
333 PF01212 Beta_elim_lyase: Beta 98.3 3.5E-06 7.6E-11 91.7 11.6 196 418-709 8-213 (290)
334 TIGR01968 minD_bact septum sit 98.3 6.7E-06 1.5E-10 87.3 13.4 102 193-316 97-207 (261)
335 PRK13237 tyrosine phenol-lyase 98.3 0.00014 3.1E-09 83.1 24.4 200 602-810 164-436 (460)
336 PLN02590 probable tyrosine dec 98.3 0.00026 5.6E-09 83.3 27.2 184 620-809 288-534 (539)
337 PRK05613 O-acetylhomoserine am 98.3 2.9E-05 6.4E-10 89.3 18.9 154 439-693 65-220 (437)
338 KOG0259 Tyrosine aminotransfer 98.3 0.00021 4.4E-09 78.3 23.8 298 418-809 80-435 (447)
339 PLN02397 aspartate transaminas 98.3 8.8E-05 1.9E-09 85.2 22.6 169 619-806 194-420 (423)
340 PRK07671 cystathionine beta-ly 98.3 2.4E-05 5.2E-10 88.4 17.7 81 619-711 134-219 (377)
341 PRK08637 hypothetical protein; 98.3 0.00027 5.8E-09 80.1 26.2 172 623-808 151-387 (388)
342 PRK05939 hypothetical protein; 98.3 2.2E-05 4.8E-10 89.3 17.3 82 602-703 122-206 (397)
343 PRK08134 O-acetylhomoserine am 98.3 4E-05 8.7E-10 88.2 19.2 129 440-664 61-189 (433)
344 PRK06702 O-acetylhomoserine am 98.2 7.2E-05 1.6E-09 85.8 20.4 152 441-693 59-212 (432)
345 PRK09275 aspartate aminotransf 98.2 0.00014 3.1E-09 85.2 23.1 80 619-706 241-328 (527)
346 TIGR03531 selenium_SpcS O-phos 98.2 5.7E-05 1.2E-09 86.7 19.4 184 442-711 104-295 (444)
347 cd00615 Orn_deC_like Ornithine 98.2 6.3E-06 1.4E-10 89.8 11.1 80 602-693 143-224 (294)
348 COG2873 MET17 O-acetylhomoseri 98.2 3.5E-05 7.6E-10 84.1 15.7 179 429-711 49-230 (426)
349 TIGR02617 tnaA_trp_ase tryptop 98.2 0.00025 5.5E-09 80.4 23.1 199 602-810 170-444 (467)
350 PLN02263 serine decarboxylase 98.1 0.00085 1.8E-08 77.4 26.2 261 441-807 131-443 (470)
351 cd02036 MinD Bacterial cell di 98.1 1.3E-05 2.8E-10 80.0 9.9 85 222-315 64-155 (179)
352 cd02033 BchX Chlorophyllide re 98.1 3.3E-05 7.1E-10 85.4 12.7 92 220-317 147-245 (329)
353 TIGR01366 serC_3 phosphoserine 98.1 5E-05 1.1E-09 85.4 14.4 49 760-808 308-361 (361)
354 PRK06434 cystathionine gamma-l 98.1 0.00013 2.8E-09 82.7 17.7 130 617-767 146-320 (384)
355 PRK03080 phosphoserine aminotr 98.0 0.00025 5.4E-09 80.2 19.4 49 762-810 323-376 (378)
356 TIGR03801 asp_4_decarbox aspar 98.0 0.00067 1.5E-08 79.6 22.6 80 619-706 240-327 (521)
357 TIGR03018 pepcterm_TyrKin exop 98.0 0.00016 3.4E-09 74.9 15.3 72 195-287 134-207 (207)
358 KOG2040 Glycine dehydrogenase 98.0 0.0005 1.1E-08 79.2 20.0 281 442-813 581-924 (1001)
359 TIGR03799 NOD_PanD_pyr putativ 98.0 0.0025 5.4E-08 75.1 26.4 81 619-705 265-348 (522)
360 PF01656 CbiA: CobQ/CobB/MinD/ 97.9 4.5E-05 9.9E-10 77.1 10.3 66 221-293 95-162 (195)
361 COG1003 GcvP Glycine cleavage 97.9 0.00071 1.5E-08 75.4 19.4 276 442-812 108-452 (496)
362 TIGR03029 EpsG chain length de 97.9 0.00023 5E-09 76.7 15.5 75 195-288 200-274 (274)
363 PRK11670 antiporter inner memb 97.9 0.00057 1.2E-08 77.0 18.9 89 220-316 215-319 (369)
364 COG0489 Mrp ATPases involved i 97.9 0.00045 9.7E-09 74.4 17.2 87 220-315 166-260 (265)
365 COG1149 MinD superfamily P-loo 97.9 0.0003 6.5E-09 74.4 14.8 103 194-317 149-253 (284)
366 COG0399 WecE Predicted pyridox 97.9 0.00094 2E-08 74.9 19.5 55 419-481 15-69 (374)
367 KOG1549 Cysteine desulfurase N 97.8 0.00079 1.7E-08 75.6 18.6 207 400-705 45-257 (428)
368 TIGR02016 BchX chlorophyllide 97.8 0.00036 7.7E-09 76.4 15.6 92 220-317 122-220 (296)
369 COG3640 CooC CO dehydrogenase 97.8 0.00074 1.6E-08 70.1 15.9 94 220-321 133-228 (255)
370 PRK15029 arginine decarboxylas 97.8 0.0014 3E-08 79.7 20.8 47 760-806 556-603 (755)
371 cd03110 Fer4_NifH_child This p 97.8 0.0013 2.8E-08 66.1 17.2 85 219-311 91-179 (179)
372 PRK05355 3-phosphoserine/phosp 97.7 0.0015 3.2E-08 73.5 18.3 47 760-806 308-357 (360)
373 TIGR03815 CpaE_hom_Actino heli 97.7 0.0035 7.6E-08 69.4 20.7 102 192-316 189-293 (322)
374 TIGR01364 serC_1 phosphoserine 97.7 0.0032 7E-08 70.5 20.6 46 761-806 299-347 (349)
375 KOG0256 1-aminocyclopropane-1- 97.7 0.0091 2E-07 66.3 22.5 184 617-807 224-461 (471)
376 PRK09841 cryptic autophosphory 97.6 0.00092 2E-08 82.0 16.1 77 195-290 628-704 (726)
377 COG0626 MetC Cystathionine bet 97.6 0.0033 7.2E-08 71.0 19.2 208 440-748 60-319 (396)
378 PRK15399 lysine decarboxylase 97.6 0.0037 7.9E-08 75.4 20.3 47 760-806 511-558 (713)
379 cd02117 NifH_like This family 97.6 0.001 2.2E-08 69.1 13.6 90 220-313 116-212 (212)
380 COG2894 MinD Septum formation 97.6 0.00047 1E-08 70.6 10.5 106 190-316 95-216 (272)
381 PRK11519 tyrosine kinase; Prov 97.6 0.0016 3.5E-08 79.8 17.2 76 195-289 623-698 (719)
382 KOG0257 Kynurenine aminotransf 97.5 0.0015 3.3E-08 72.6 14.6 212 418-711 46-267 (420)
383 KOG3022 Predicted ATPase, nucl 97.5 0.0016 3.4E-08 69.1 14.0 91 220-316 156-261 (300)
384 PRK14494 putative molybdopteri 97.5 0.00035 7.7E-09 73.4 9.2 49 37-91 1-50 (229)
385 KOG0053 Cystathionine beta-lya 97.5 0.0038 8.2E-08 70.1 17.7 169 441-711 75-247 (409)
386 PRK13578 ornithine decarboxyla 97.5 0.0042 9E-08 75.0 18.8 47 760-806 517-564 (720)
387 PLN02368 alanine transaminase 97.5 0.0047 1E-07 70.7 18.5 190 440-711 108-317 (407)
388 PRK13185 chlL protochlorophyll 97.5 0.0021 4.6E-08 69.1 14.6 90 220-317 117-212 (270)
389 cd00550 ArsA_ATPase Oxyanion-t 97.4 0.00093 2E-08 71.5 11.4 64 252-315 162-241 (254)
390 PRK15400 lysine decarboxylase 97.4 0.0043 9.2E-08 74.9 17.7 47 760-806 511-558 (714)
391 PRK05367 glycine dehydrogenase 97.4 0.0079 1.7E-07 75.4 20.0 43 760-802 394-437 (954)
392 PRK00771 signal recognition pa 97.3 0.012 2.6E-07 67.6 19.7 37 36-78 94-130 (437)
393 PF01276 OKR_DC_1: Orn/Lys/Arg 97.3 0.00083 1.8E-08 76.4 9.5 166 442-693 65-244 (417)
394 cd02040 NifH NifH gene encodes 97.3 0.0047 1E-07 66.2 14.8 36 37-78 1-36 (270)
395 TIGR00064 ftsY signal recognit 97.3 0.0058 1.3E-07 66.1 15.4 37 36-78 71-107 (272)
396 PRK13232 nifH nitrogenase redu 97.3 0.0038 8.2E-08 67.4 13.9 91 220-316 116-214 (273)
397 cd00611 PSAT_like Phosphoserin 97.2 0.019 4E-07 64.5 19.2 44 761-804 307-353 (355)
398 PRK10867 signal recognition pa 97.2 0.015 3.3E-07 66.8 18.2 83 220-310 183-273 (433)
399 TIGR00959 ffh signal recogniti 97.2 0.012 2.7E-07 67.4 17.4 83 220-310 182-272 (428)
400 COG0455 flhG Antiactivator of 97.2 0.0061 1.3E-07 65.5 14.0 103 191-314 96-206 (262)
401 TIGR01281 DPOR_bchL light-inde 97.2 0.0049 1.1E-07 66.2 13.3 88 220-315 115-208 (268)
402 CHL00072 chlL photochlorophyll 97.1 0.0062 1.4E-07 66.5 13.8 89 220-316 115-209 (290)
403 cd02032 Bchl_like This family 97.1 0.0071 1.5E-07 65.0 14.0 90 220-317 115-210 (267)
404 cd02035 ArsA ArsA ATPase funct 97.1 0.0067 1.5E-07 63.3 13.2 63 221-289 114-180 (217)
405 COG3977 Alanine-alpha-ketoisov 97.1 0.018 3.8E-07 61.7 15.9 178 617-807 177-411 (417)
406 TIGR01425 SRP54_euk signal rec 97.1 0.043 9.3E-07 62.9 20.2 35 38-78 101-135 (429)
407 COG0112 GlyA Glycine/serine hy 97.0 0.056 1.2E-06 60.2 19.7 155 639-809 179-392 (413)
408 cd02038 FleN-like FleN is a me 97.0 0.0076 1.7E-07 58.3 11.7 84 221-311 45-139 (139)
409 PLN02271 serine hydroxymethylt 97.0 0.05 1.1E-06 63.9 20.2 67 618-693 297-365 (586)
410 PRK14495 putative molybdopteri 97.0 0.0032 7E-08 71.5 9.8 37 37-79 1-37 (452)
411 COG1703 ArgK Putative periplas 97.0 0.034 7.4E-07 60.0 16.9 35 38-78 52-86 (323)
412 PRK14974 cell division protein 96.9 0.017 3.6E-07 64.3 15.0 36 37-78 140-175 (336)
413 PRK11889 flhF flagellar biosyn 96.9 0.024 5.1E-07 64.0 15.9 36 37-78 241-276 (436)
414 PRK10416 signal recognition pa 96.9 0.03 6.4E-07 62.0 16.6 36 37-78 114-149 (318)
415 cd03113 CTGs CTP synthetase (C 96.9 0.0068 1.5E-07 63.6 10.8 108 194-314 117-239 (255)
416 PHA02518 ParA-like protein; Pr 96.9 0.031 6.7E-07 57.3 15.4 36 38-78 1-36 (211)
417 TIGR01005 eps_transp_fam exopo 96.9 0.011 2.3E-07 73.1 14.1 64 221-290 656-719 (754)
418 TIGR03371 cellulose_yhjQ cellu 96.8 0.014 3E-07 61.5 13.0 37 37-78 1-37 (246)
419 PRK10818 cell division inhibit 96.8 0.041 8.8E-07 59.1 16.6 38 36-78 1-38 (270)
420 COG0541 Ffh Signal recognition 96.8 0.079 1.7E-06 60.0 19.0 128 195-343 169-310 (451)
421 PLN02414 glycine dehydrogenase 96.8 0.068 1.5E-06 67.2 20.5 43 761-803 422-465 (993)
422 TIGR01287 nifH nitrogenase iro 96.8 0.02 4.4E-07 61.7 14.1 34 39-78 2-35 (275)
423 PRK12727 flagellar biosynthesi 96.8 0.037 8.1E-07 64.6 16.7 60 14-78 328-387 (559)
424 PRK13230 nitrogenase reductase 96.8 0.017 3.7E-07 62.5 13.4 36 37-78 1-36 (279)
425 PRK05703 flhF flagellar biosyn 96.8 0.022 4.9E-07 65.4 14.8 38 37-78 221-258 (424)
426 TIGR00176 mobB molybdopterin-g 96.8 0.0029 6.2E-08 62.7 6.5 38 40-83 2-39 (155)
427 cd03115 SRP The signal recogni 96.7 0.041 8.8E-07 54.9 14.9 33 40-78 3-35 (173)
428 PRK13231 nitrogenase reductase 96.7 0.02 4.3E-07 61.4 13.4 94 220-317 113-209 (264)
429 KOG0634 Aromatic amino acid am 96.7 0.26 5.7E-06 55.5 22.0 205 602-810 185-469 (472)
430 PRK13233 nifH nitrogenase redu 96.7 0.025 5.5E-07 61.0 13.6 37 36-78 1-38 (275)
431 PRK12726 flagellar biosynthesi 96.6 0.047 1E-06 61.4 15.5 36 37-78 206-241 (407)
432 PRK12723 flagellar biosynthesi 96.6 0.054 1.2E-06 61.5 15.8 84 221-310 255-345 (388)
433 cd03116 MobB Molybdenum is an 96.5 0.0081 1.7E-07 59.8 8.0 41 37-83 1-41 (159)
434 PRK13849 putative crown gall t 96.5 0.068 1.5E-06 56.5 15.4 37 37-78 1-37 (231)
435 COG1763 MobB Molybdopterin-gua 96.5 0.0072 1.6E-07 60.1 7.4 39 36-80 1-39 (161)
436 PRK14493 putative bifunctional 96.5 0.011 2.3E-07 64.0 9.0 36 37-79 1-36 (274)
437 PRK13236 nitrogenase reductase 96.4 0.031 6.8E-07 61.2 12.6 37 36-78 5-41 (296)
438 TIGR00750 lao LAO/AO transport 96.4 0.16 3.5E-06 55.7 17.9 37 36-78 33-69 (300)
439 PRK13235 nifH nitrogenase redu 96.3 0.059 1.3E-06 58.2 13.9 36 37-78 1-36 (274)
440 PF00282 Pyridoxal_deC: Pyrido 96.3 0.043 9.3E-07 62.1 13.2 72 630-706 204-278 (373)
441 PF07015 VirC1: VirC1 protein; 96.3 0.12 2.7E-06 54.2 15.1 37 37-78 1-37 (231)
442 COG3844 Kynureninase [Amino ac 96.2 1.3 2.9E-05 48.4 22.7 51 759-809 352-404 (407)
443 KOG2862 Alanine-glyoxylate ami 96.2 0.054 1.2E-06 58.4 12.2 94 602-712 132-227 (385)
444 PLN02724 Molybdenum cofactor s 96.2 1.1 2.4E-05 56.0 25.6 81 618-709 191-281 (805)
445 PF02347 GDC-P: Glycine cleava 96.1 0.14 3E-06 58.6 15.8 79 617-711 195-283 (429)
446 PRK13234 nifH nitrogenase redu 96.1 0.083 1.8E-06 57.8 13.5 37 36-78 3-39 (295)
447 PF00142 Fer4_NifH: 4Fe-4S iro 96.1 0.08 1.7E-06 56.5 12.7 93 220-316 116-215 (273)
448 TIGR00461 gcvP glycine dehydro 95.9 0.54 1.2E-05 58.8 20.8 43 760-802 383-426 (939)
449 TIGR03453 partition_RepA plasm 95.9 0.078 1.7E-06 60.3 12.7 67 7-78 70-140 (387)
450 KOG0780 Signal recognition par 95.8 0.13 2.9E-06 57.1 13.1 116 220-341 183-309 (483)
451 PF00464 SHMT: Serine hydroxym 95.8 0.2 4.4E-06 56.9 15.1 171 602-801 159-399 (399)
452 PF07755 DUF1611: Protein of u 95.8 0.022 4.7E-07 62.1 7.1 38 36-78 111-148 (301)
453 COG0076 GadB Glutamate decarbo 95.6 0.11 2.5E-06 60.2 12.8 210 418-706 75-292 (460)
454 PRK13869 plasmid-partitioning 95.6 0.065 1.4E-06 61.4 10.6 66 8-78 86-157 (405)
455 PRK12724 flagellar biosynthesi 95.6 0.16 3.4E-06 58.1 13.3 36 38-78 224-259 (432)
456 PRK13768 GTPase; Provisional 95.6 0.075 1.6E-06 56.9 10.3 37 36-78 1-37 (253)
457 PF03308 ArgK: ArgK protein; 95.5 0.083 1.8E-06 56.3 10.3 51 12-78 14-64 (266)
458 PRK09435 membrane ATPase/prote 95.5 0.52 1.1E-05 52.5 17.0 34 39-78 58-91 (332)
459 PF00448 SRP54: SRP54-type pro 95.4 0.18 3.8E-06 52.0 12.0 91 220-315 83-178 (196)
460 COG0403 GcvP Glycine cleavage 95.3 2.4 5.3E-05 48.0 21.0 47 758-804 400-447 (450)
461 cd02029 PRK_like Phosphoribulo 95.2 0.079 1.7E-06 56.9 9.0 33 40-78 2-34 (277)
462 PLN02452 phosphoserine transam 95.2 1.7 3.6E-05 49.2 20.0 136 655-806 171-362 (365)
463 PRK15453 phosphoribulokinase; 95.1 0.16 3.6E-06 54.9 11.0 37 36-78 4-40 (290)
464 COG3033 TnaA Tryptophanase [Am 95.1 1.4 3.1E-05 48.7 17.9 58 601-663 171-228 (471)
465 PRK10751 molybdopterin-guanine 95.0 0.083 1.8E-06 53.3 8.0 37 36-78 5-41 (173)
466 PF06564 YhjQ: YhjQ protein; 94.8 0.029 6.4E-07 59.4 4.4 37 37-78 1-37 (243)
467 PF03205 MobB: Molybdopterin g 94.8 0.033 7.1E-07 54.2 4.4 39 38-82 1-39 (140)
468 COG1348 NifH Nitrogenase subun 94.7 1.8 4E-05 45.4 16.8 88 221-317 118-217 (278)
469 PF12897 Aminotran_MocR: Alani 94.7 1 2.2E-05 50.6 15.8 187 602-807 161-415 (425)
470 PRK14491 putative bifunctional 94.7 0.14 3E-06 61.5 10.1 39 35-79 8-46 (597)
471 COG3367 Uncharacterized conser 94.7 0.17 3.8E-06 55.1 9.7 37 37-78 148-184 (339)
472 PRK06731 flhF flagellar biosyn 94.5 0.64 1.4E-05 50.3 13.8 36 37-78 75-110 (270)
473 PRK14723 flhF flagellar biosyn 94.5 0.7 1.5E-05 56.6 15.4 83 220-310 263-356 (767)
474 COG1921 SelA Selenocysteine sy 94.5 1.1 2.4E-05 50.6 15.7 198 418-714 40-246 (395)
475 cd03114 ArgK-like The function 94.4 0.29 6.4E-06 48.0 10.1 33 40-78 2-34 (148)
476 TIGR01365 serC_2 phosphoserine 94.4 1.5 3.2E-05 49.8 17.1 48 760-807 321-373 (374)
477 KOG0258 Alanine aminotransfera 94.4 4.5 9.8E-05 45.4 19.8 86 602-692 201-299 (475)
478 PF10662 PduV-EutP: Ethanolami 94.4 0.81 1.8E-05 44.7 12.7 62 240-302 79-142 (143)
479 PRK13886 conjugal transfer pro 94.3 0.86 1.9E-05 48.5 13.7 38 36-78 1-38 (241)
480 TIGR03499 FlhF flagellar biosy 94.1 0.27 5.8E-06 53.6 10.0 36 37-78 194-231 (282)
481 COG0552 FtsY Signal recognitio 94.1 1.6 3.4E-05 48.2 15.7 97 195-311 208-318 (340)
482 PF03841 SelA: L-seryl-tRNA se 94.1 0.055 1.2E-06 60.2 4.6 69 643-713 159-235 (367)
483 PRK14489 putative bifunctional 93.9 0.16 3.4E-06 57.4 7.9 38 36-79 204-241 (366)
484 COG2403 Predicted GTPase [Gene 93.9 0.05 1.1E-06 60.0 3.6 40 34-78 123-162 (449)
485 KOG2749 mRNA cleavage and poly 93.8 0.19 4.1E-06 55.4 7.9 36 37-78 103-138 (415)
486 cd01983 Fer4_NifH The Fer4_Nif 93.8 0.069 1.5E-06 46.7 3.8 33 40-78 2-34 (99)
487 PRK12462 phosphoserine aminotr 93.7 4.9 0.00011 45.5 19.3 48 758-805 310-360 (364)
488 TIGR00073 hypB hydrogenase acc 93.6 1.7 3.7E-05 44.9 14.3 35 37-78 22-56 (207)
489 PRK06995 flhF flagellar biosyn 93.5 0.97 2.1E-05 52.8 13.6 36 37-77 256-292 (484)
490 KOG0633 Histidinol phosphate a 93.4 0.95 2E-05 48.0 11.8 180 602-804 149-374 (375)
491 PRK10463 hydrogenase nickel in 93.1 1.5 3.3E-05 47.8 13.5 33 39-78 106-138 (290)
492 PRK05595 replicative DNA helic 93.0 0.63 1.4E-05 54.0 11.0 37 38-78 201-237 (444)
493 PRK14722 flhF flagellar biosyn 92.7 2.3 5E-05 48.2 14.7 37 37-78 137-174 (374)
494 PRK08506 replicative DNA helic 92.7 1.1 2.5E-05 52.3 12.8 36 38-78 192-227 (472)
495 TIGR00665 DnaB replicative DNA 92.7 0.83 1.8E-05 52.8 11.6 37 38-78 195-231 (434)
496 PRK08760 replicative DNA helic 92.7 0.8 1.7E-05 53.7 11.4 37 38-78 229-265 (476)
497 COG1982 LdcC Arginine/lysine/o 92.6 6.1 0.00013 46.7 18.3 162 442-693 69-236 (557)
498 PRK05636 replicative DNA helic 92.6 0.82 1.8E-05 53.9 11.4 37 38-78 265-301 (505)
499 PHA02542 41 41 helicase; Provi 92.4 1.1 2.5E-05 52.3 12.2 48 38-96 190-237 (473)
500 TIGR00101 ureG urease accessor 92.3 3.2 6.9E-05 42.8 14.1 22 40-62 4-25 (199)
No 1
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=1.9e-119 Score=1077.30 Aligned_cols=751 Identities=62% Similarity=1.004 Sum_probs=615.5
Q ss_pred CCCCCCCCCCCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHhccCCccccCC
Q 003466 27 HPQPLDLPLSHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTKLPSLSLRRNF 106 (818)
Q Consensus 27 ~~~~~~~~~~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~~~~~~~~~~~ 106 (818)
++....++.+.+.+|||||+||||||+||++|++++. ++|.+|.|+||||||++.++|..++.+...++..+
T Consensus 17 ~~~~~~~~~~~~~~fI~GtnT~VGKT~vS~~L~~~~~-----~~g~~~~y~KPvqTG~~~~~Da~~v~~~~~~~~~~--- 88 (817)
T PLN02974 17 SSAAGALPLSCPAFAVWGANTAVGKTLVSAGLAAAAA-----SRRSPVLYVKPVQTGFPDDSDARFVFRKADSLSRR--- 88 (817)
T ss_pred CcccccccCCCceEEEEECCCCCCHHHHHHHHHHHHH-----HcCCceEEEEEEECCCCCCccHHHHHHhhhccccc---
Confidence 4566788899999999999999999999999999994 88999999999999998899999999876444222
Q ss_pred CcccccccchhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhh
Q 003466 107 PSSLILSNSILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAER 186 (818)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~ 186 (818)
-.++..+|..+..++..+ +++.....+... +.-.|+..... .+..++.|.++|.|++|+|||+|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~g~~~~------~~~~~~~~~~~~~~~~p~SPhlAA~~ 155 (817)
T PLN02974 89 SESLFASNRTLFLSPPAA-KSALGGVSSMGA------HAAVNAGAEAG------VTSSALWCHTLFAWRRAVSPHLAARR 155 (817)
T ss_pred cccccccccccccccccc-cccccccccccc------ccccccccccc------cccccccccCceecCCCCCHHHHHHH
Confidence 356778899999888777 444444444333 11222222111 11234678899999999999999999
Q ss_pred hcCCCCChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHH
Q 003466 187 ESGGVVGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISG 266 (818)
Q Consensus 187 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~ 266 (818)
+ |..+++++|.+.++++.++.- +.+..+.+|++|||||||+++|++.+.+++||++.+++|||||++.+||+|||
T Consensus 156 e-g~~i~~~~i~~~~~~~l~~~~----~~~~~~~~d~vlVEGAGGl~vPl~~~~~~~Dl~~~l~lPvILV~~~~LG~INh 230 (817)
T PLN02974 156 E-GRGVSDDEVLEAVNRSLREVG----ANESGGGRVLALVETAGGVASPGPSGTLQCDLYRPLRLPAILVGDGRLGGISA 230 (817)
T ss_pred h-CCCCCHHHHHHHHHHHHHhhh----cccccccCCeEEEECCCcccccCCCCCCHHHHHHHhCCCEEEEECCCCCHHHH
Confidence 9 999999999999987654310 00112458999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEEEccCCCCCHHHHHHhhcCCCCEEecCCCCCCCcchhhhhhhhhhhhHHHHHHHHHHHHHHH
Q 003466 267 TISAYESLKLRGYDVVAVVFEDHGLVNEVPLMSYLRNRVPVLVLPPLPQDSSNDLMEWFDESHNVFDSLKNIMLLAYSER 346 (818)
Q Consensus 267 ~~~~~~~l~~~~~~v~gvi~N~~~~~~~~~l~~~~~~~~pvlgiP~~~~~~~~~~~~~l~~~~~~l~~l~~~l~~~~~~r 346 (818)
+++++|+|+.+|++|.|||+|+...+|.++|++++.+++||+++|+.|.....++.+|++.....|..+++.+.+++.+|
T Consensus 231 tllt~eaL~~rGi~v~gii~~~~~~~N~~~l~~~~~~~~pv~~lp~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 310 (817)
T PLN02974 231 TLAAYESLLLRGYDVVAVVIEDHGLSNEKALLSYLSNRVPVFVLPPVPEDPGDDLDEWFDDSKSTFDALLDALQSWHSGR 310 (817)
T ss_pred HHHHHHHHHHCCCCEEEEEEeCCccchHHHHHHHHhcCCcEEeCCCCCCCcchhHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999988889999999998779999999998888777899999988888999999999999999
Q ss_pred HHhhccchhhhcCccccccCCCCCCCCCCeEEEEeecCCe--eEEEeCCcCccccceeecccccccccCC-CCCCHHHHH
Q 003466 347 IQRLCDMPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGEN--FSVYQDQKNKFIGQQFDACASWWTQGPD-ATLQIELAR 423 (818)
Q Consensus 347 ~~~~~~l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~--~~v~D~dG~~~~~~ylD~~sg~~~~~lG-h~~hp~V~e 423 (818)
+++++.|.+++++++|||||+++.+....+.+|++++|.+ +|++|.+|++.+++|||++|||||+++| |+ ||+|++
T Consensus 311 ~~~~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~-~p~I~~ 389 (817)
T PLN02974 311 LQRLQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTL-QPELAR 389 (817)
T ss_pred hHHHHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCC-CHHHHH
Confidence 9999999999999999999999987556788999999962 4799999953455899999999999999 68 999999
Q ss_pred HHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCcccc
Q 003466 424 DMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEK 503 (818)
Q Consensus 424 Ai~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~ 503 (818)
|+++|+++++|+++.++.|+++.+|||+|++..+.+++++|||++|||||||.|||||+|+|+.++|+..+..+..+...
T Consensus 390 Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~ 469 (817)
T PLN02974 390 AVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGD 469 (817)
T ss_pred HHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCccccccccccc
Confidence 99999999999887778899999999999996654557899999999999999999997667766654000000000000
Q ss_pred ccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCc
Q 003466 504 CIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSR 583 (818)
Q Consensus 504 ~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~ 583 (818)
.+|.+||+++++|||+|+++|++++...++..|+.||+.+++.++++|.+.++++.+++++|..+++.... .+.+|.+.
T Consensus 470 ~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~ 548 (817)
T PLN02974 470 LIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEG-EETTWESR 548 (817)
T ss_pred CCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccc-cccccccc
Confidence 25889999999999999999999998777776556888888888888877777788888888765321000 00113333
Q ss_pred cchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecc
Q 003466 584 DEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVF 663 (818)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~ 663 (818)
++.|+..++.+.+...|.+.+++.|++.+..+++++|||||+|||+||+||+++||++|+++||++||+||++||+|||+
T Consensus 549 ~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~ 628 (817)
T PLN02974 549 DEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVF 628 (817)
T ss_pred cccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecc
Confidence 33444333445667777888988886422113567899999999769999999999999999999999999999999999
Q ss_pred cCcccCCccchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCCh------H---------------------
Q 003466 664 TGFWRLGVETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDS------K--------------------- 716 (818)
Q Consensus 664 TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~------~--------------------- 716 (818)
|||||||++|+++++||+|||+|+||+|||||+|+||++++++|++.|.... +
T Consensus 629 TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~ 708 (817)
T PLN02974 629 TGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWY 708 (817)
T ss_pred cCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999885210 1
Q ss_pred ------------------HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec
Q 003466 717 ------------------LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL 777 (818)
Q Consensus 717 ------------------~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~ 777 (818)
+|.+.+.+.+.+++.|.+|||.|+|++++|+.+.....+....+..+.+.|+ ++||++++.
T Consensus 709 ~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~ 788 (817)
T PLN02974 709 KDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL 788 (817)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec
Confidence 1112233445678999999999999999998764322334456778899999 999999999
Q ss_pred CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 778 GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 778 g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
|++|+++||+++++++++++++++++.|
T Consensus 789 Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 789 GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998876
No 2
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=6.5e-81 Score=690.86 Aligned_cols=397 Identities=30% Similarity=0.429 Sum_probs=338.7
Q ss_pred hhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccc
Q 003466 356 RAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHV 435 (818)
Q Consensus 356 ~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~ 435 (818)
.+.+++|||||+++..... |.+|++++|. |+||.||| +|||++|||||+++||+ ||+|.+|+++|++++.|+
T Consensus 8 ~d~~~~whP~t~~~~~~~~-~~~i~~aeG~--yl~d~~G~----r~lDg~sg~W~~~~Gh~-~~~i~~Ai~~Q~~~l~~~ 79 (449)
T COG0161 8 ADLSHLWHPFTQMRDPLAE-PRVIVRAEGV--YLTDIDGR----RYLDGMSGLWCVNHGHG-RPEIAEAIKKQLDKLPHV 79 (449)
T ss_pred hhhhheecccccccccccc-ceeeeeccee--EEEeCCCC----EEEecccHHHHhhcCcC-CHHHHHHHHHHHHhCCch
Confidence 3889999999999886434 8899998885 79999999 99999999999999999 999999999999999999
Q ss_pred cCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCC
Q 003466 436 MFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGS 515 (818)
Q Consensus 436 ~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~s 515 (818)
++.+++++|+++||++|+++.|.+.+++|||++|||||||.||||| ++|+..+|+ ++|++||+++++
T Consensus 80 ~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma-~qY~~~~G~------------p~r~~~Isr~~g 146 (449)
T COG0161 80 MFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMA-LQYWRARGQ------------PQRKKFISRRNG 146 (449)
T ss_pred hhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHH-HHHHHhcCC------------CcceEEEEeccC
Confidence 8888899999999999999998555899999999999999999999 677777787 789999999999
Q ss_pred CCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchh
Q 003466 516 YHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSD 595 (818)
Q Consensus 516 YHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~ 595 (818)
|||+|++++|++|....+.. +| +++ .+...|++.|++|+.. +++ ...++
T Consensus 147 YHG~T~ga~Sv~g~~~~~~~----~~-------~~l----l~~~~~~~~P~~y~~~--------~~~--------~~~~~ 195 (449)
T COG0161 147 YHGDTLGAMSVGGPVALRHA----FY-------DPL----LPEVLHLPAPYAYRRG--------FFG--------EGDEE 195 (449)
T ss_pred cCcccchheeccCchhhhhh----hc-------ccc----ccCceecCCCcccccC--------CCC--------CChHH
Confidence 99999999999995544322 11 111 1345678888877421 111 11122
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchh
Q 003466 596 LASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTA 675 (818)
Q Consensus 596 ~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~ 675 (818)
. ..+++.||+.|.+ .++++|||||+|||+|++||+++||++||+++|++|++||||||+|||+|||||||++|++
T Consensus 196 ~-~~~a~~le~~i~~----~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~ 270 (449)
T COG0161 196 F-AEAADELEALILE----HGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC 270 (449)
T ss_pred H-HHHHHHHHHHHHh----cCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh
Confidence 2 4567889999985 5669999999999977779999999999999999999999999999999999999999999
Q ss_pred cccCCCCcEEEecccccCCccccceeecchHHHhhccCC-hH--------------------------------------
Q 003466 676 DLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-SK-------------------------------------- 716 (818)
Q Consensus 676 e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-~~-------------------------------------- 716 (818)
+++||+|||+|+||||||||+|+||++++++|++.|..+ ..
T Consensus 271 e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~ 350 (449)
T COG0161 271 EHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIG 350 (449)
T ss_pred hhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999999999999999999999999999998775 21
Q ss_pred -HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccC-CCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHH
Q 003466 717 -LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNA-GYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVC 794 (818)
Q Consensus 717 -~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~-~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edI 794 (818)
++.+++.+.+..+|.|++|||.|++.++|++.+.... +++...+..+.+.++++|++++|.|+.+.++||+++|++||
T Consensus 351 ~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~~i~~~PPliit~~ei 430 (449)
T COG0161 351 AYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLGDVIYLMPPLIITREEI 430 (449)
T ss_pred HHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecCCEEEEcCCccCCHHHH
Confidence 2223333335667899999999999999999885432 33445577889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 003466 795 SQLLLKLYQRLEEFD 809 (818)
Q Consensus 795 d~~~~~l~~~l~~l~ 809 (818)
|++++++.+++++..
T Consensus 431 d~l~~~l~~al~~~~ 445 (449)
T COG0161 431 DELVDALREALDETL 445 (449)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-74 Score=622.54 Aligned_cols=341 Identities=28% Similarity=0.360 Sum_probs=297.7
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.+|| +||||.+|+++++|||+ ||+|++|+++|++++.|.+. .+.+++..+|+++|++
T Consensus 24 ~~~~~~~G~G~--~v~D~~G~----~YlDf~~Giav~~lGH~-hP~iv~al~~Q~~kl~h~sn-~~~~~~~~~la~~L~~ 95 (404)
T COG4992 24 LPVVIVRGEGA--YVWDQQGR----EYLDFAAGIAVNNLGHC-HPALVEALKEQAEKLWHVSN-LFYNEPQAELAEKLVE 95 (404)
T ss_pred CceeEEecccc--EEECCCCC----EeeeeccceeeeccCCC-CHHHHHHHHHHHHHhhhccc-ccCChHHHHHHHHHHh
Confidence 35688888776 79999999 99999999999999999 99999999999999998763 5789999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.++ . .++|||+|||+||||+|||+| |.|++. ++|.+||+|.+||||+|++++|+|+.+.|+.
T Consensus 96 ~s~-~-~d~vff~NSGaEA~EaAiKlA-Rk~~~~---------------~~k~~Iia~~nsFHGRT~galS~t~~~ky~~ 157 (404)
T COG4992 96 LSP-F-ADRVFFCNSGAEANEAALKLA-RKYTGD---------------PEKSKIIAFENSFHGRTLGALSATGQPKYRK 157 (404)
T ss_pred hCc-c-ccEEEEcCCcHHHHHHHHHHH-HHHcCC---------------CCCcEEEEEcCCcCCccceeeeccCChhhcc
Confidence 997 2 689999999999999999999 778761 5678999999999999999999999888877
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
+|. |.. +++.+ ++|||+ +++++++.
T Consensus 158 ~F~-Pl~---------------~g~~~----------------vpfnDi------------------~al~~ai~----- 182 (404)
T COG4992 158 GFG-PLL---------------PGFRH----------------VPFNDI------------------EALEAAID----- 182 (404)
T ss_pred CCC-CCC---------------CCcee----------------cCCCCH------------------HHHHHHhc-----
Confidence 631 211 12222 338885 67787775
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++||||+||| ||+||++++|++||+++|+||++||+|||+||||||+||||++|+++|+||+|||+|++|+||||
T Consensus 183 ---~~taAvivEPI-QGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG 258 (404)
T COG4992 183 ---EDTAAVIVEPI-QGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGG 258 (404)
T ss_pred ---cCeEEEEEecc-cCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCC
Confidence 38999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~G 739 (818)
+|+||+++++.+.+.+..+.+ ++.++|.+...+++.+.+|||+|
T Consensus 259 -~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~G 337 (404)
T COG4992 259 -FPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRG 337 (404)
T ss_pred -ccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecce
Confidence 899999999877887766544 22233444456778899999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+|+++++..+ ..+..+++.|+++||++.+.+ +++||.||+++|+||||+++++|++++..+.
T Consensus 338 LmiGiel~~~--------~~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 338 LMIGIELKEP--------YRARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred eEEEEEecCc--------ccHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999876 247789999999999998754 8999999999999999999999999998764
No 4
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-73 Score=635.11 Aligned_cols=372 Identities=25% Similarity=0.312 Sum_probs=316.2
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|++++++.|. |+||+||| +||||.||+++.++||| ||+|++|+++|++++.|....-..+++.++++|+|.+
T Consensus 38 ~p~~~~ra~G~--~l~DvdG~----~ylDf~sgi~v~~~GH~-hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~ 110 (447)
T COG0160 38 FPLVIVRAEGA--YLYDVDGN----EYLDFLSGIAVLNLGHN-HPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTA 110 (447)
T ss_pred CcceEEecccC--EEEeCCCC----EEEEcccCcchhccCCC-CHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHH
Confidence 46789999987 79999999 99999999999999999 9999999999999999876544455999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.+|...+++++|+|||+||||+|||+| |.||++ ..||+|+++|||+|.+++++|+....+.
T Consensus 111 ~~p~~~~~~~~f~~sGaeA~E~AiKiA-r~~Tgr------------------~~viaf~~afHG~T~galslT~~~~~~~ 171 (447)
T COG0160 111 LAPGSGLKKVFFGNSGAEAVEAAIKIA-RAYTGR------------------PGVIAFDGAFHGRTLGALSLTGSKPPYK 171 (447)
T ss_pred hCCcccCCeEEecCCcHHHHHHHHHHH-HHHhCC------------------CcEEEECCcccccchhhHHhccCccccc
Confidence 988634689999999999999999999 899876 4799999999999999999998764332
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. +.++ +.+++.++++|++|+++.. .. .+++...+.+++++.+....
T Consensus 172 ~-------~~~~--------~~~~v~~~Pyp~~yr~p~~---------------~~--~~~~~~~~~~~~e~~i~~~~-- 217 (447)
T COG0160 172 A-------GFGP--------LPPGVYHVPYPNPYRCPFG---------------IG--GEECGDDALEYIERALFDLE-- 217 (447)
T ss_pred c-------CCCC--------CCCCeEEecCCccccCccc---------------Cc--hhhhhHHHHHHHHHHHHhhc--
Confidence 1 1111 1134678999999876431 11 13445555677888665432
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.+++++||||+||| ||+||+++||++||++|+++|++||++||+|||||||||||+||++|++||+|||+|+||+||||
T Consensus 218 ~~~~~vAaiI~EpI-QgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G 296 (447)
T COG0160 218 VGPEEVAAIIIEPI-QGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGG 296 (447)
T ss_pred CCCCceeEEEEecc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCC
Confidence 56789999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH----------------------------------HHHHHHHHHHHcCCCeeEEEeeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK----------------------------------LWDLELIQQISSHRTVQRVVALGT 740 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~----------------------------------~~~~~l~~~l~~~~~v~~vrg~Gl 740 (818)
+|+|+|+++++++++..+... ++.++|.+..+++|.|++|||+|+
T Consensus 297 -~Pl~avv~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Gl 375 (447)
T COG0160 297 -LPLSAVVGRAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGL 375 (447)
T ss_pred -CceeEEeccHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccce
Confidence 799999999999994322111 222344445578999999999999
Q ss_pred EEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC---CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 741 LCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG---NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 741 ~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g---~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
|+++|++.+.....++.+.+..++..|+++|+++..+| |+|||.||+++|++++|+.+++|+++|.++
T Consensus 376 m~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 376 MIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 99999998865666788899999999999999998755 999999999999999999999999999764
No 5
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-70 Score=621.99 Aligned_cols=397 Identities=23% Similarity=0.320 Sum_probs=322.0
Q ss_pred hhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccc
Q 003466 355 KRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGH 434 (818)
Q Consensus 355 ~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~ 434 (818)
+.+.+++||||+++..+....|+++++++|. ||||.||| +||||++|+|++++||+ ||+|.+|+++|++++.+
T Consensus 4 ~~~~~~~w~p~~~~~~~~~~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~ 76 (449)
T PRK07481 4 SNNARRFWHPMAHPAEMKARPPIIIVRGDGV--YVYDIDGK----KLLDGVGGLWNVNVGHN-REEVKEAIVRQLDELEY 76 (449)
T ss_pred ccccccccCCcccccccccCCCceEEecccc--EEEeCCCC----EEEECchhHHhhcCCCC-CHHHHHHHHHHHHhccc
Confidence 4567889999999987644468899998886 79999999 99999999999999999 99999999999999877
Q ss_pred ccC-CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEc
Q 003466 435 VMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALK 513 (818)
Q Consensus 435 ~~~-~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~ 513 (818)
.+. .+..+++..+||++|++++|++.+++|+|++|||||||+|||+| |.|++..|+ ++|.+||+|+
T Consensus 77 ~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklA-r~~~~~~g~------------~~r~~ii~~~ 143 (449)
T PRK07481 77 YSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLA-RQYWKVRGQ------------PERTKFISLK 143 (449)
T ss_pred eecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEEC
Confidence 543 25679999999999999885334689999999999999999999 788766554 5688999999
Q ss_pred CCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCc
Q 003466 514 GSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDS 593 (818)
Q Consensus 514 ~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~ 593 (818)
++|||+|.+++++++...++..| .+ . .+++.+++.|+.+++ +||. .+.
T Consensus 144 ~~yHG~t~ga~s~~~~~~~~~~~-----~~---~--------~~g~~~~~~~~~~~~--------~~~~--------~d~ 191 (449)
T PRK07481 144 QGYHGTHFGGASVNGNTVFRRNY-----EP---L--------LPGCFHVETPWLYRN--------PFTE--------QDP 191 (449)
T ss_pred CCcCCcchhhhccCCCccccccc-----CC---C--------CCCCEEeCCCccccc--------ccCC--------CCH
Confidence 99999999999999866444321 00 0 123445555654432 1331 012
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc
Q 003466 594 SDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET 673 (818)
Q Consensus 594 ~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~ 673 (818)
+.+...+.+.+|+.|.. .++++|||||+||| |++||+++||++||++|+++|++||++||+|||+|||||||++|
T Consensus 192 ~~~~~~~~~~le~~i~~----~~~~~iAAviiEPv-qg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~ 266 (449)
T PRK07481 192 EELARICARLLEREIAF----QGPDTIAAFIAEPV-QGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWF 266 (449)
T ss_pred HHHHHHHHHHHHHHHHh----cCCCcEEEEEEecc-cCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhh
Confidence 24445556778887763 35679999999998 99999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC-------hH------------------------------
Q 003466 674 TADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-------SK------------------------------ 716 (818)
Q Consensus 674 a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-------~~------------------------------ 716 (818)
+++++||+|||+|+||+|||||+|+||+++++++++.+... .+
T Consensus 267 a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~ 346 (449)
T PRK07481 267 GSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANA 346 (449)
T ss_pred HhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999999999999877421 00
Q ss_pred -----HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCC-c--hHHHHHHHHHHHhCCceEeecCCEEEEECCCC
Q 003466 717 -----LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGY-G--SLYAASLLKKLREDGVYMRPLGNVIYLMCGPC 788 (818)
Q Consensus 717 -----~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~-~--~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~ 788 (818)
++.+.+.+..++++.+.+|||.|+|++++|..+.....+ + ...+..+.+.|+++||++.+.|+.++++||++
T Consensus 347 ~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~i~l~Ppl~ 426 (449)
T PRK07481 347 AKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSGTKIILSPPLV 426 (449)
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCEEEEECCCC
Confidence 111222222345888999999999999999754211211 1 34567788999999999999888899999999
Q ss_pred ChHHHHHHHHHHHHHHHHHH
Q 003466 789 SSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 789 ~t~edId~~~~~l~~~l~~l 808 (818)
+|++|||+++++++++++++
T Consensus 427 it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 427 IQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999764
No 6
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-69 Score=621.94 Aligned_cols=399 Identities=19% Similarity=0.234 Sum_probs=320.8
Q ss_pred cchhhhcCccccccCCCCCCCC--CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhh
Q 003466 352 DMPKRAGELFWWPFTQHKLVPE--EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTA 429 (818)
Q Consensus 352 ~l~~~~~~~~~~p~t~~~~~~~--~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~ 429 (818)
.+.+++.+++|+|++++..+.. ..|+++++++|. ++||.||| +||||+||+|++++||+ ||+|++|+++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~--~l~D~dG~----~ylD~~sg~~~~~lGh~-~p~v~~Av~~q~ 79 (461)
T PRK07482 7 ELLAWDRDHFFHPSTHLGDHARGELPGRIVEGGEGI--RITDAQGR----RYIDAFAGLYCVNVGYG-RTEVAEAIAEQA 79 (461)
T ss_pred HHHHhhhhhccCCcccccccccccCCCeeEEeeeee--EEEECCCC----EEEEcccchhhhcCCCC-CHHHHHHHHHHH
Confidence 4455567789999987755421 247899998886 79999999 99999999999999999 999999999999
Q ss_pred hhcccccC-CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceE
Q 003466 430 ARFGHVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELK 508 (818)
Q Consensus 430 ~~~~~~~~-~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~ 508 (818)
+++.+... ..+.+++..+|||+|++.+|.+ +++|+|++|||||||+|||+| |+|++.+|. ++|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~sGSEAve~AlKlA-r~~~~~~g~------------~~r~~ 145 (461)
T PRK07482 80 KELAYYHTYVGHGTEASITLSKRIIDRAPAG-MSKVYYGLSGSDANETQIKLV-WYYNNVLGR------------PEKKK 145 (461)
T ss_pred HhcCccccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCchHHHHHHHHHHH-HHHHHhcCC------------CCCce
Confidence 99875432 3567999999999999988754 689999999999999999999 778755443 56889
Q ss_pred EEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhh
Q 003466 509 VLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFY 588 (818)
Q Consensus 509 II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~ 588 (818)
||+|+++|||+|.+++++++.+.++..| .++ ..+..+++.|+++++.. .+
T Consensus 146 Ii~~~~~YHG~t~ga~s~~~~~~~~~~~------------~~~----~~~~~~~~~p~~~~~~~-------~~------- 195 (461)
T PRK07482 146 IISRWRGYHGSGVVTGSLTGLSLFHQHF------------DLP----IARVLHTEAPHYYRRAD-------AG------- 195 (461)
T ss_pred EEEecCccCCccHhhhhccCCchhhhcc------------CCC----CCCCEEcCCCccccccc-------cC-------
Confidence 9999999999999999999876554431 111 12334555665543210 00
Q ss_pred cccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCccc
Q 003466 589 EERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWR 668 (818)
Q Consensus 589 ~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGR 668 (818)
..++.+...+.+.+++.+++ .++++|||||+||| |++||+++||++|+++||++|++||+|||+|||+|||||
T Consensus 196 --~~~~~~~~~~~~~l~~~~~~----~~~~~iAAvi~EPv-qg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGR 268 (461)
T PRK07482 196 --MSEEQFSAYCADELEELILA----EGPDTIAAFIAEPV-LGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGR 268 (461)
T ss_pred --CCHHHHHHHHHHHHHHHHHh----cCCCcEEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Confidence 01123344567888888853 34678999999998 999999999999999999999999999999999999999
Q ss_pred CCccchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC-------hH-------------------------
Q 003466 669 LGVETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-------SK------------------------- 716 (818)
Q Consensus 669 tG~~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-------~~------------------------- 716 (818)
||++|+++++||+|||+|+||+|||||+|+||+++++++++.+... .+
T Consensus 269 tG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~ 348 (461)
T PRK07482 269 LGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN 348 (461)
T ss_pred CcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999988999999999998876421 00
Q ss_pred ----------HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCccc-CCCc--hHHHHHHHHHHHhCCceEeec--CCEE
Q 003466 717 ----------LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCN-AGYG--SLYAASLLKKLREDGVYMRPL--GNVI 781 (818)
Q Consensus 717 ----------~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~-~~~~--~~~a~~~~~~l~e~Gvlv~p~--g~~i 781 (818)
++.+.+.+.+++++.+.+|||.|+|++++++.+... ..++ ...+..++..|+++||++++. ++++
T Consensus 349 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i 428 (461)
T PRK07482 349 LVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDIL 428 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEE
Confidence 122334444567899999999999999999865321 1122 124678899999999999753 7999
Q ss_pred EEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 782 YLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 782 r~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
++.||+++|++|||+++++++++++++
T Consensus 429 ~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 429 GFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876
No 7
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=5.6e-69 Score=615.86 Aligned_cols=398 Identities=19% Similarity=0.261 Sum_probs=317.6
Q ss_pred chhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhc
Q 003466 353 MPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARF 432 (818)
Q Consensus 353 l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~ 432 (818)
+.++++.++|+|++++.......|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~ 78 (459)
T PRK05965 6 LIELDRAHLIHPVASYRGHEARGVTVLASAKGA--TLTDASGH----QLLDAFAGLWCVNVGYG-QESIVEAAAEQMREL 78 (459)
T ss_pred HHHhhhhccccccccccccccCCCceEEeeeEe--EEEECCCC----EEEECcccHHhccCCCC-CHHHHHHHHHHHHhc
Confidence 345566778999987632211246789998886 79999999 99999999999999999 999999999999998
Q ss_pred ccccC-CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEE
Q 003466 433 GHVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLA 511 (818)
Q Consensus 433 ~~~~~-~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~ 511 (818)
.+.+. ..+.+++..+||++|++.+|.+ +++|+|++|||||||+|||+| |+|++.+|. ++|.+||+
T Consensus 79 ~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGSEAve~AlKlA-r~~~~~~g~------------~~r~kii~ 144 (459)
T PRK05965 79 PYATGYFHFGSEPAIRLAAKLAERAPGS-LNHVYFTLGGSDAVDSAVRFI-RHYWNATGR------------PSKKQFIS 144 (459)
T ss_pred CCcccccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCChhHHHHHHHHHH-HHHHHhcCC------------CCccEEEE
Confidence 76543 2467899999999999998754 689999999999999999999 788766554 66889999
Q ss_pred EcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhccc
Q 003466 512 LKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEER 591 (818)
Q Consensus 512 ~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~ 591 (818)
++++|||+|.+++++++.+.++..+ ++.. +...+++.|++++++ ++ .
T Consensus 145 ~~~~YHG~t~~a~s~t~~~~~~~~~--------~~~~--------~~~~~~~~~~~~~~~--------~~---------~ 191 (459)
T PRK05965 145 LERGYHGSSSVGAGLTALPAFHRGF--------DLPL--------PWQHKIPSPYPYRNP--------VG---------D 191 (459)
T ss_pred ecCCcCcccHHHHHhcCCchhhccc--------CCCC--------CCCEEcCCCcccccc--------cC---------C
Confidence 9999999999999999865444321 1111 112344555444321 11 1
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc
Q 003466 592 DSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV 671 (818)
Q Consensus 592 ~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~ 671 (818)
+.+.+...+.+.+++.|+. .++++|||||+||| |++||+++||++||++||++|++||++||+|||+|||||||+
T Consensus 192 ~~~~~~~~~~~~l~~~i~~----~~~~~iAAvIvEPi-qg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~ 266 (459)
T PRK05965 192 DPQAIIAASVAALRAKVAE----LGADNVAAFFCEPI-QGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP 266 (459)
T ss_pred ChHHHHHHHHHHHHHHHHh----cCCCceEEEEEecc-ccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch
Confidence 1123445566788888864 34579999999997 999999999999999999999999999999999999999999
Q ss_pred cchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC-------hH-------------------HHH------
Q 003466 672 ETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-------SK-------------------LWD------ 719 (818)
Q Consensus 672 ~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-------~~-------------------~~~------ 719 (818)
+|+++++||+|||+|+||+|||||+|+||+++++++++.+... .+ +++
T Consensus 267 ~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~ 346 (459)
T PRK05965 267 LFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLA 346 (459)
T ss_pred hhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999999999999999999999999999999876421 01 111
Q ss_pred ------HHHH---HHHHcCCCeeEEEeeeeEEEEEEecCcccCCC---chHHHHHHHHHHHhCCceEeecC-CEEEEECC
Q 003466 720 ------LELI---QQISSHRTVQRVVALGTLCAIELQAAGCNAGY---GSLYAASLLKKLREDGVYMRPLG-NVIYLMCG 786 (818)
Q Consensus 720 ------~~l~---~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~---~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~pp 786 (818)
+.+. +.+.+++.|.+|||.|+|+++++..+.....+ +...+..+.+.|+++||++++.| +.|++.||
T Consensus 347 ~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~Pp 426 (459)
T PRK05965 347 NGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPA 426 (459)
T ss_pred HHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEECC
Confidence 1122 23345788999999999999999765321111 12356788999999999999876 78999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHH
Q 003466 787 PCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 787 l~~t~edId~~~~~l~~~l~~l~ 809 (818)
+++|++||++++++|+++++++.
T Consensus 427 L~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 427 LCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred CcCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998874
No 8
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=1.7e-68 Score=616.16 Aligned_cols=401 Identities=19% Similarity=0.241 Sum_probs=320.0
Q ss_pred cCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC
Q 003466 358 GELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF 437 (818)
Q Consensus 358 ~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~ 437 (818)
+..+||||+++.......|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++.+...
T Consensus 54 ~~~~~~p~~~~~~~~~~~p~~i~~~~G~--~l~D~dG~----~ylD~~sg~~~~~lGh~-hp~v~~Av~~ql~~~~~~~~ 126 (504)
T PLN02760 54 GHDMLAPFTAGWQSTDLEPLVIEKSEGS--YVYDINGK----KYLDALAGLWCTALGGS-EPRLVAAATEQLNKLPFYHS 126 (504)
T ss_pred cCCcccCcccccccccCCCceEEeeeee--EEEECCCC----EEEEcCcCHHhcccCCC-CHHHHHHHHHHHhhccceec
Confidence 3448999999876544467889998886 79999999 99999999999999999 99999999999999876532
Q ss_pred -CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCC
Q 003466 438 -PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSY 516 (818)
Q Consensus 438 -~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sY 516 (818)
.++.+++..+|||+|++.+++..+++|+|+||||||||+|||+| |+|++.+|. ++|.+||+++++|
T Consensus 127 ~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlA-r~~~~~~g~------------~~r~~iI~~~~~y 193 (504)
T PLN02760 127 FWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLV-WYYNNALGR------------PNKKKFIARSKSY 193 (504)
T ss_pred ccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEECCCc
Confidence 24678999999999999864333679999999999999999999 777755443 5688999999999
Q ss_pred CCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhH
Q 003466 517 HGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDL 596 (818)
Q Consensus 517 HG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~ 596 (818)
||+|.+++++++.+.++.. +.++. +...+++.|++++... +. .+.+++
T Consensus 194 HG~t~~a~slsg~~~~~~~------------~~~~~----~~~~~~~~p~~~~~~~--------~~--------~~~~~~ 241 (504)
T PLN02760 194 HGSTLISASLSGLPALHQK------------FDLPA----PFVLHTDCPHYWRFHL--------PG--------ETEEEF 241 (504)
T ss_pred cCChHhhhhccCChhhccC------------CCCCC----CCcEEeCCCcccccCC--------CC--------CcHHHH
Confidence 9999999999987654432 11111 1234566665553210 00 011223
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhc
Q 003466 597 ASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTAD 676 (818)
Q Consensus 597 ~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e 676 (818)
...+.+.+++.+.. .+++++||||+||| |++||+++||++||++|+++|++||++||+|||||||||||++|+++
T Consensus 242 ~~~~~~~le~~l~~----~~~~~iAAvI~EPv-~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e 316 (504)
T PLN02760 242 STRLADNLENLILK----EGPETIAAFIAEPV-MGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCD 316 (504)
T ss_pred HHHHHHHHHHHHHh----cCCCceEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHH
Confidence 34445677777753 35678999999998 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEecccccCCccccceeecchHHHhhccCC-------hH---------------------------------
Q 003466 677 LLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-------SK--------------------------------- 716 (818)
Q Consensus 677 ~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-------~~--------------------------------- 716 (818)
++||+|||+||||+|||||+|+||+++++++++.+... .+
T Consensus 317 ~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~ 396 (504)
T PLN02760 317 KYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKI 396 (504)
T ss_pred hcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999999999999977531 01
Q ss_pred --HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCC-C--chHHHHHHHHHHHhCCceEeecCCEEEEECCCCChH
Q 003466 717 --LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAG-Y--GSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSP 791 (818)
Q Consensus 717 --~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~-~--~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~ 791 (818)
.+.+.+ +.+.+++.+.+|||.|+|+++++.++..... . +...+..+++.|+++||++.+.++++|++||++||+
T Consensus 397 g~~l~~~L-~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~lrl~Ppl~it~ 475 (504)
T PLN02760 397 APRFQDGI-KAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIITP 475 (504)
T ss_pred HHHHHHHH-HHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecCCEEEEECCCCCCH
Confidence 111122 2346688899999999999999976532111 1 223577789999999999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHhh
Q 003466 792 EVCSQLLLKLYQRLEEFDKVEEKLK 816 (818)
Q Consensus 792 edId~~~~~l~~~l~~l~~~~~~~~ 816 (818)
+|||+++++++++++++++-...+|
T Consensus 476 eeid~~~~~l~~al~~~~~~~~~~~ 500 (504)
T PLN02760 476 EEVDELISIYGKALKATEERVAELK 500 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998864333333
No 9
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.4e-68 Score=612.87 Aligned_cols=398 Identities=28% Similarity=0.440 Sum_probs=318.5
Q ss_pred chhhhcCccccccCCCCCCCC-CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhh
Q 003466 353 MPKRAGELFWWPFTQHKLVPE-EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAAR 431 (818)
Q Consensus 353 l~~~~~~~~~~p~t~~~~~~~-~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~ 431 (818)
+.+.+..++|+|++++..... .+|.++++++|. ||||.||| +|||+++|+|+.++||+ ||+|.+|+++|+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~ 95 (472)
T PRK08742 23 WRQRDLAVLWHPCTQMREHPHTLPLVPIARGEGA--WLVGHDGR----RYLDAVSSWWTNLFGHA-EPRIGAAIAAQAGE 95 (472)
T ss_pred HHHhhhcccccCCcccccccccCCCeeEEecccC--EEEeCCCC----EEEEcCccHHhccCCCC-CHHHHHHHHHHHHh
Confidence 345567779999988654321 134678888886 79999999 99999999999999999 99999999999999
Q ss_pred cccccCCCCCChhHHHHHHHHHhccCC----CCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccce
Q 003466 432 FGHVMFPENVYEPALECAELLLQGVGK----GWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIEL 507 (818)
Q Consensus 432 ~~~~~~~~~~~~~~~eLae~L~~~~~~----~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~ 507 (818)
+.+.....+.+++..+|+++|++.+|. +++++|+|++|||||||+|||+| |.|++.+|. ++|.
T Consensus 96 l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlA-r~~~~~~g~------------~~r~ 162 (472)
T PRK08742 96 LEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMA-FHYFHNRGE------------HRRT 162 (472)
T ss_pred CCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHH-HHHHHhcCC------------CCCc
Confidence 887655567799999999999998864 23679999999999999999999 777665554 5688
Q ss_pred EEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchh
Q 003466 508 KVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIF 587 (818)
Q Consensus 508 ~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~ 587 (818)
+||+|+++|||+|.+++++++...++..| .|+ .++..+++.|+.+++.. ..
T Consensus 163 ~ii~~~~syHG~t~gals~~~~~~~~~~~-~p~---------------~~~~~~~~~p~~~~~~~--------~~----- 213 (472)
T PRK08742 163 RFIALENGYHGETIGALAVGDIPLYRRVY-APL---------------LLESLFAPSPDAYLAEP--------GQ----- 213 (472)
T ss_pred EEEEECCCcCCCchhhhhccCCccccccc-CCC---------------CCCCEEeCCCCcccccc--------CC-----
Confidence 99999999999999999999866554431 111 02234555665543210 10
Q ss_pred hcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcc
Q 003466 588 YEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFW 667 (818)
Q Consensus 588 ~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfG 667 (818)
..+.....+.+.+++.++ .++++|||||+||++|++||+++||++||++||++|++||++||+||||||||
T Consensus 214 ----~~~~~~~~~~~~l~~~~~-----~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfG 284 (472)
T PRK08742 214 ----SAEDYALQAADALQALFE-----QSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFG 284 (472)
T ss_pred ----CHHHHHHHHHHHHHHHHH-----hCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 111223335677888886 34679999999995499999999999999999999999999999999999999
Q ss_pred cCCccchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC--------hH-----------------HHH---
Q 003466 668 RLGVETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD--------SK-----------------LWD--- 719 (818)
Q Consensus 668 RtG~~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~--------~~-----------------~~~--- 719 (818)
|||++|+++++||+|||+|+||+|||||+|+||+++++++++.+... .. ++.
T Consensus 285 RtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~ 364 (472)
T PRK08742 285 RTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDD 364 (472)
T ss_pred CCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999989999999999999876421 00 111
Q ss_pred ------------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCC---chHHHHHHHHHHHhCCceEeecCCEEEEE
Q 003466 720 ------------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGY---GSLYAASLLKKLREDGVYMRPLGNVIYLM 784 (818)
Q Consensus 720 ------------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~---~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ 784 (818)
..+++.+++++.|.+|||.|+|++++|+.+.....+ +...+..+.+.|+++||++.+.|++|||.
T Consensus 365 l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~vi~~~ 444 (472)
T PRK08742 365 VIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLGDVLYWM 444 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecCCEEEEE
Confidence 123444567889999999999999999865322211 12345678899999999999989999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH
Q 003466 785 CGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 785 ppl~~t~edId~~~~~l~~~l~~l 808 (818)
||+++|++|||+++++|+++++++
T Consensus 445 PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 445 PPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999764
No 10
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=7.7e-68 Score=605.19 Aligned_cols=393 Identities=25% Similarity=0.407 Sum_probs=316.0
Q ss_pred hhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcc
Q 003466 354 PKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFG 433 (818)
Q Consensus 354 ~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~ 433 (818)
.+.+..++|+|++++..+.+..|+++++++|. ++||.||| +||||++|+|+.++||+ ||+|++|+++|++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~ 87 (453)
T PRK06943 15 VARSLRAVWHPCTQMKHHERLPLLPVARGEGA--WLYDRDGR----RYLDAISSWWVNLFGHA-NPRINAALKDQLDTLE 87 (453)
T ss_pred HHHhhcccccCCcCccccccCCCceEEecccC--EEEeCCCC----EEEEcchHHHHhcCCCC-CHHHHHHHHHHHHhcC
Confidence 44556779999988654322357889998887 79999999 99999999999999999 9999999999999988
Q ss_pred cccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEc
Q 003466 434 HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALK 513 (818)
Q Consensus 434 ~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~ 513 (818)
+.......+++..+||++|++.+|.+ +++|+|++|||||||+|||+| |.|+..+|. ++|.+||+|+
T Consensus 88 ~~~~~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~sGseAve~AlKlA-~~~~~~rg~------------~~r~~Ii~~~ 153 (453)
T PRK06943 88 HAMLAGCTHEPAIELAERLAALTGGT-LGHAFFASDGASAVEIALKMS-FHAWRNRGR------------GDKREFVCLA 153 (453)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCCHHHHHHHHHHH-HHHHHHhCC------------CCCCEEEEEC
Confidence 77655678999999999999988754 579999999999999999999 566544443 5678999999
Q ss_pred CCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCc
Q 003466 514 GSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDS 593 (818)
Q Consensus 514 ~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~ 593 (818)
++|||+|.+++++++...++..| .|. + ++..+++.|+.+... +. ...
T Consensus 154 ~~yHG~t~gals~~~~~~~~~~~-~~~-------~--------~~~~~~~~p~~~~~~---------------~~--~~~ 200 (453)
T PRK06943 154 NGYHGETIGALGVTDVALFKDAY-DPL-------I--------RHAHVVASPDARGAR---------------PG--ETA 200 (453)
T ss_pred CCcCCCcHHhhcccCChhhhccc-ccC-------C--------CCCEEECCCCccccc---------------cC--CCH
Confidence 99999999999999876555431 111 0 122344445432110 00 011
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc
Q 003466 594 SDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET 673 (818)
Q Consensus 594 ~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~ 673 (818)
+.+...+.+.+++.|+ .+++++||||+||++|++||+++||++||++|+++|++||++||+|||+|||||||+||
T Consensus 201 ~~~~~~~~~~l~~~l~-----~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f 275 (453)
T PRK06943 201 ADVAARALADVRRLFA-----ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF 275 (453)
T ss_pred HHHHHHHHHHHHHHHH-----hCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh
Confidence 2333345577888886 35689999999994499999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC--------h-H----------------HHH---------
Q 003466 674 TADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD--------S-K----------------LWD--------- 719 (818)
Q Consensus 674 a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~--------~-~----------------~~~--------- 719 (818)
+++++||+|||+|+||+|||||+|+||+++++++++.+... . . +++
T Consensus 276 a~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~ 355 (453)
T PRK06943 276 ACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNA 355 (453)
T ss_pred HHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999999999999999999876421 0 0 111
Q ss_pred ---HHH---HHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHH
Q 003466 720 ---LEL---IQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEV 793 (818)
Q Consensus 720 ---~~l---~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~ed 793 (818)
+.+ ++.+.+++.|.+|||.|+|+++++..+. .+....+..+.+.|+++||++.+.++.++|.||+++|++|
T Consensus 356 ~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~---~~~~~~~~~i~~~~~~~Gll~~~~g~~l~~~Ppl~it~~e 432 (453)
T PRK06943 356 RKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDG---DAARTFSRRFFEAALERELLLRPIGTTVYLMPPYVLDDDE 432 (453)
T ss_pred HHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCC---CcchHHHHHHHHHHHHCCcEEEecCCEEEEeCCCcCCHHH
Confidence 112 2233557889999999999999997542 1122346788999999999999988899999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 003466 794 CSQLLLKLYQRLEEF 808 (818)
Q Consensus 794 Id~~~~~l~~~l~~l 808 (818)
||+++++|+++|+++
T Consensus 433 id~~~~~l~~al~~~ 447 (453)
T PRK06943 433 IAWLAERTRATLDAT 447 (453)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999876
No 11
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-68 Score=568.41 Aligned_cols=362 Identities=23% Similarity=0.280 Sum_probs=309.0
Q ss_pred CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHH
Q 003466 374 EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 374 ~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
..|++|++++|. ||||.+|+ +|||+.+|+|++++||| ||+|++|+.+|+.++.|.+ ..+.+++..+||++|+
T Consensus 31 ~~Pl~Iv~~~~~--ylyDe~G~----ryLD~f~Gi~tvslGHc-hP~v~~a~~kQl~~l~H~t-~~~~~~pi~~~Ae~L~ 102 (442)
T KOG1404|consen 31 KKPLVIVRGEGQ--YLYDEEGR----RYLDAFGGIVTVSLGHC-HPDVVAAAVKQLKKLYHTT-SGYLNPPIHDLAEALV 102 (442)
T ss_pred cCCceEEecceE--EEEcCCCc----eeehhhCCeEEEEcCCC-ChHHHHHHHHhhhhhEEee-ccccCCcHHHHHHHHH
Confidence 457899998886 79999999 99999999999999999 9999999999999888765 4688999999999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
+.+|.+ +.++||+||||||||.||+|| |+||+. .+||+++++|||.|..++++|+.+.++
T Consensus 103 s~~P~~-l~~vfF~nsGsEANelal~ma-r~Yt~~------------------~diIa~r~~YHG~t~~t~glt~~~~~k 162 (442)
T KOG1404|consen 103 SKLPGD-LKVVFFVNSGSEANELALKMA-RLYTGN------------------LDIIARRNSYHGNTLYTLGLTGLSPWK 162 (442)
T ss_pred HhCCCC-ceEEEEecCCchHHHHHHHHH-HHhcCC------------------ceEEEeeccccCCchhhcccccCCccc
Confidence 999865 789999999999999999999 899875 499999999999999999999987666
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
..+ |.+ ..+++|..-|++|+.. |.+ +. +++..+.|.+.++..+..
T Consensus 163 ~~~--------------~~~--~~~~~~~~~Pdp~r~~--------~~~-------~~-~~e~~d~~a~~l~d~i~~--- 207 (442)
T KOG1404|consen 163 QNF--------------PGV--ASGVHHTMNPDPYRGI--------FGG-------SN-EEEASDRYAKELEDLILY--- 207 (442)
T ss_pred ccC--------------CCC--CCcccccCCCCccccc--------CCC-------Cc-hhhhHHHHHHHHHHHHHh---
Confidence 531 111 1245677778888653 222 11 334455666777777764
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
..++.+||+|.||| ||.||++.+|++||++++++|+++|.++|+|||||||||||.+|++|.+||.|||+|++|+||+
T Consensus 208 -~~~~~vAafiaEtI-qGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGn 285 (442)
T KOG1404|consen 208 -DGPETVAAFIAETI-QGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGN 285 (442)
T ss_pred -cCCCceeEEEeehh-ccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccC
Confidence 56788999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCCh-H-----------------------------------HHHHHHHHHHHcCCCeeEEEe
Q 003466 694 GVIPLAATLATNAVFDSFVGDS-K-----------------------------------LWDLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~-~-----------------------------------~~~~~l~~~l~~~~~v~~vrg 737 (818)
| +|+|||+++++|++.+.... . ++.+++.+...+||+|++|||
T Consensus 286 G-~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG 364 (442)
T KOG1404|consen 286 G-FPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRG 364 (442)
T ss_pred C-CcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeeccc
Confidence 9 89999999999999886654 1 222344444578999999999
Q ss_pred eeeEEEEEEecCc-ccCCCchHHHHHHHHHHHhCCceEee---cCCEEEEECCCCChHHHHHHHHHHH
Q 003466 738 LGTLCAIELQAAG-CNAGYGSLYAASLLKKLREDGVYMRP---LGNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 738 ~Gl~~~iel~~~~-~~~~~~~~~a~~~~~~l~e~Gvlv~p---~g~~ir~~ppl~~t~edId~~~~~l 801 (818)
+|+|+|+|+++++ ...+|+......+.+.|.++|+++.- .|+++|+.||+++|++|||.+++.+
T Consensus 365 ~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 365 RGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 9999999999986 34455566777889999999999975 3689999999999999998888866
No 12
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=9.1e-68 Score=604.95 Aligned_cols=393 Identities=23% Similarity=0.286 Sum_probs=316.1
Q ss_pred cchhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhh
Q 003466 352 DMPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAAR 431 (818)
Q Consensus 352 ~l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~ 431 (818)
++.+++.+++|+|++.... ..|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~---~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~ 78 (451)
T PRK07678 9 ELLAKDEQYVWHGMKPYNP---NATMVVAKAEGA--WVTDIQGN----RYLDGMSGLWCVNVGYG-RKELAEAAYEQLKT 78 (451)
T ss_pred HHHHHhhcccCCCcccccc---CCCeeEEeeeee--EEEeCCCC----EEEEccccHHhhcCCCC-CHHHHHHHHHHHHh
Confidence 4455566778998754321 347888898886 79999999 99999999999999999 99999999999999
Q ss_pred cccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEE
Q 003466 432 FGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLA 511 (818)
Q Consensus 432 ~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~ 511 (818)
+.+... .+.+++..+||++|++++|. .++|+|++|||||||+|||+| |.||+++|. ++|.+||+
T Consensus 79 ~~~~~~-~~~~~~~~~lae~l~~~~~~--~~~v~f~~sGseA~e~AlklA-r~~t~~~g~------------~~r~~ii~ 142 (451)
T PRK07678 79 LSYFPL-TQSHEPAIKLAEKLNEWLGG--EYVIFFSNSGSEANETAFKIA-RQYHAQKGE------------PHRYKFIS 142 (451)
T ss_pred cCcccc-ccCCHHHHHHHHHHHHhCCC--CCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEE
Confidence 876543 46789999999999999875 369999999999999999999 788866554 66889999
Q ss_pred EcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhccc
Q 003466 512 LKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEER 591 (818)
Q Consensus 512 ~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~ 591 (818)
|+++|||+|.+++++++...++.. |.+ ..+++.+++.|+.++.+ +..
T Consensus 143 ~~~~yHG~t~~als~~~~~~~~~~-----~~~-----------~~~~~~~~~~~~~~~~~--------~~~--------- 189 (451)
T PRK07678 143 RYRAYHGNSMGALAATGQAQRKYK-----YEP-----------LAPGFLHVPPPDCYRMP--------GIE--------- 189 (451)
T ss_pred ECCCcCCccHHHhhcCCCcccccc-----cCC-----------CCCCCEEeCCCcccccc--------ccC---------
Confidence 999999999999999986654432 110 01234455566554321 110
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc
Q 003466 592 DSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV 671 (818)
Q Consensus 592 ~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~ 671 (818)
..+.....+.+.+++.|+. .+++++||||+||| |++||+++||++||++||++|++||++||+|||||||||||+
T Consensus 190 ~~~~~~~~~~~~l~~~~~~----~~~~~iAAvi~EPi-qg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 264 (451)
T PRK07678 190 SEDIYDLECVKEIDRVMTW----ELSETIAAVIMEPI-ITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK 264 (451)
T ss_pred ChHHHHHHHHHHHHHHHHh----cCCCceEEEEEccc-cCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch
Confidence 0112334455677888863 34679999999998 999999999999999999999999999999999999999999
Q ss_pred cchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCCh------H-----------------------------
Q 003466 672 ETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDS------K----------------------------- 716 (818)
Q Consensus 672 ~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~------~----------------------------- 716 (818)
+|+++++||+|||+|+||+|||||+|+||+++++++++.+.... +
T Consensus 265 ~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~ 344 (451)
T PRK07678 265 AFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIER 344 (451)
T ss_pred hHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999998775310 1
Q ss_pred ------HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCC-CchHHHHHHHHHHHhCCceEeec-------CCEEE
Q 003466 717 ------LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAG-YGSLYAASLLKKLREDGVYMRPL-------GNVIY 782 (818)
Q Consensus 717 ------~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~-~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir 782 (818)
++.+.+.+.+++++.+.+|||.|+|+++++..+..... .+...+..++..|+++||++.+. +++||
T Consensus 345 ~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lr 424 (451)
T PRK07678 345 SAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLT 424 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEE
Confidence 12223334556788899999999999999976532222 23456778999999999999764 37899
Q ss_pred EECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 783 LMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 783 ~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
|+||++||++|||+++++++++++++
T Consensus 425 l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 425 LSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999765
No 13
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-67 Score=600.92 Aligned_cols=397 Identities=20% Similarity=0.243 Sum_probs=319.6
Q ss_pred chhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhc
Q 003466 353 MPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARF 432 (818)
Q Consensus 353 l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~ 432 (818)
+.+.+.+++|+||+++..+.+..|+++++++|. |+||.||| +|||+++|+|+.++||+ ||+|++|+++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~ 83 (466)
T PRK07036 11 LAQADKRHLLHPWHDFSSLGKEGSLVIVEAEGI--YVTDADGR----RYLDGIGGMWCVNVGYG-REEMADAIADQARRL 83 (466)
T ss_pred HHHHhhcccccCccCccccccCCCceEEeCcee--EEEECCCC----EEEECcccHHhhcCCCC-CHHHHHHHHHHHHhC
Confidence 345567789999988755433457889998886 79999999 99999999999999999 999999999999998
Q ss_pred ccccCCC-CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEE
Q 003466 433 GHVMFPE-NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLA 511 (818)
Q Consensus 433 ~~~~~~~-~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~ 511 (818)
.+.+... ..+++..+||++|++.+|.+ +++|+|+||||||||+|||+| |+|++.+|. ++|.+||+
T Consensus 84 ~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~AlklA-r~~~~~~g~------------t~r~~Ii~ 149 (466)
T PRK07036 84 PYYTPFGDMTNAPAAELAAKLAELAPGD-LNHVFLTTGGSTAVDSALRFV-HYYFNVRGR------------PAKKHIIT 149 (466)
T ss_pred cccccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCchHHHHHHHHHH-HHHHHhcCC------------CCccEEEE
Confidence 7765433 67999999999999988754 689999999999999999999 788765543 56789999
Q ss_pred EcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhccc
Q 003466 512 LKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEER 591 (818)
Q Consensus 512 ~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~ 591 (818)
|+++|||+|.+++++++.+.++.. |.+ . .++..+++.|++++++. +.
T Consensus 150 ~~~~YHG~t~~a~s~~~~~~~~~~-----~~~-------~----~~~~~~~~~p~~~~~~~--------~~--------- 196 (466)
T PRK07036 150 RGDAYHGSTYLTASLTGKAADRTE-----FDY-------A----SDLVHHLSSPNPYRRPA--------GM--------- 196 (466)
T ss_pred EcCccCCccHhhhcccCCCccccc-----ccC-------C----CCCcEEecCCccccccc--------CC---------
Confidence 999999999999999986654432 111 0 12234556665543211 00
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc
Q 003466 592 DSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV 671 (818)
Q Consensus 592 ~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~ 671 (818)
........+.+.+++.+.. .+++++||||+||| |++||+++||++||++|+++|++||++||+|||+|||||||+
T Consensus 197 ~~~~~~~~~~~~~~~~i~~----~~~~~iAavi~EPv-~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~ 271 (466)
T PRK07036 197 SEAAFCDFLVDEFEDKILS----LGADNIAAFIAEPI-LGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGH 271 (466)
T ss_pred ChHHHHHHHHHHHHHHHHH----cCCCceEEEEEeCC-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCch
Confidence 0112233344566666653 45689999999998 999999999999999999999999999999999999999999
Q ss_pred cchhc-ccCCCCcEEEecccccCCccccceeecchHHHhhccCC---------h-H------------------------
Q 003466 672 ETTAD-LLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD---------S-K------------------------ 716 (818)
Q Consensus 672 ~~a~e-~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~---------~-~------------------------ 716 (818)
+|+++ ++|++|||+|+||+|||||+|+||+++++++++.+... + .
T Consensus 272 ~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~ 351 (466)
T PRK07036 272 FFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLC 351 (466)
T ss_pred hhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 99998 78999999999999999999999999999999876421 0 0
Q ss_pred --------HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCC---CchHHHHHHHHHHHhCCceEeecCCEEEEEC
Q 003466 717 --------LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAG---YGSLYAASLLKKLREDGVYMRPLGNVIYLMC 785 (818)
Q Consensus 717 --------~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~---~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~p 785 (818)
++.+.+ +.+++++.+.+|||.|+|++++|+.+..... .+...+..+.+.|+++||++.+.++.+++.|
T Consensus 352 ~~~~~~g~~l~~~L-~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~l~P 430 (466)
T PRK07036 352 EHVREVGPYFEERL-ASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSP 430 (466)
T ss_pred HHHHHHHHHHHHHH-HHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecCCEEEEeC
Confidence 122223 3346688899999999999999976532211 1234567889999999999999889999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHH
Q 003466 786 GPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 786 pl~~t~edId~~~~~l~~~l~~l~ 809 (818)
|+++|++|||+++++++++++++.
T Consensus 431 pl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 431 PLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998874
No 14
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=4.5e-67 Score=600.27 Aligned_cols=399 Identities=20% Similarity=0.274 Sum_probs=319.8
Q ss_pred chhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhc
Q 003466 353 MPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARF 432 (818)
Q Consensus 353 l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~ 432 (818)
+.+++.+++|+|++.+..+....|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~ 80 (460)
T PRK06105 8 LEARDIAYHLHPYTNARRHEEEGPLVIERGEGI--YVYDDAGK----RYIEGMAGLWSVALGFS-EQRLVEAAARQMKKL 80 (460)
T ss_pred HHHhhhhhcccCCcccccccccCCceEEeeeEE--EEEECCCC----EEEEcchhHHhccCCCC-CHHHHHHHHHHHHhC
Confidence 456677889999987644322357888898886 79999999 99999999999999999 999999999999998
Q ss_pred cccc-CCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEE
Q 003466 433 GHVM-FPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLA 511 (818)
Q Consensus 433 ~~~~-~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~ 511 (818)
++.. +..+.++++.+|+++|++.+|.+ +++|+|++|||||||+|||+| |+|++.+|. ++|.+||+
T Consensus 81 ~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseAve~AlKla-r~~~~~~g~------------t~r~~il~ 146 (460)
T PRK06105 81 PFYHTFSHKSHGPVIDLAEKLVAMAPVP-MSKVFFTNSGSEANDTVVKLV-WYYNNALGR------------PEKKKIIS 146 (460)
T ss_pred CCeecccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEE
Confidence 7643 22357999999999999998754 689999999999999999999 777654443 56889999
Q ss_pred EcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhccc
Q 003466 512 LKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEER 591 (818)
Q Consensus 512 ~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~ 591 (818)
++++|||+|.+++++++.+.++.. .+ ++ .++..+++.|+++++ ++. ..
T Consensus 147 ~~~~yHG~t~~a~s~t~~~~~~~~--------~~----~~----~~~~~~~~~p~~~~~----------~~~------~~ 194 (460)
T PRK06105 147 RQRGYHGVTIASASLTGLPNNHRS--------FD----LP----LDRILHTGCPHYYRF----------GLP------GE 194 (460)
T ss_pred ecCccCCcchhheeccCCcccccc--------cC----CC----CCCCEEcCCCccccc----------ccC------CC
Confidence 999999999999999986544332 11 11 123455666655431 111 00
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc
Q 003466 592 DSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV 671 (818)
Q Consensus 592 ~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~ 671 (818)
..+.....+.+.+++.+.. .+++++||||+||| |++||++++|++||++|+++|++||++||+|||||||||||+
T Consensus 195 ~~~~~~~~~~~~le~~~~~----~~~~~iAavIvEPi-qg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~ 269 (460)
T PRK06105 195 SEEAFATRLANELEALILA----EGPDTIAAFIGEPV-MGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN 269 (460)
T ss_pred ChHHHHHHHHHHHHHHHHH----cCCCceEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch
Confidence 1123334456778888753 34678999999998 999999999999999999999999999999999999999999
Q ss_pred cchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC----------hH-------------------------
Q 003466 672 ETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD----------SK------------------------- 716 (818)
Q Consensus 672 ~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~----------~~------------------------- 716 (818)
+|+++++||+|||+|+||+|||||+|+||+++++++++.+... ..
T Consensus 270 ~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~ 349 (460)
T PRK06105 270 MFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVG 349 (460)
T ss_pred hhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999999999999999989999999999999876421 00
Q ss_pred -------HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccC-CCc--hHHHHHHHHHHHhCCceEeecCCEEEEECC
Q 003466 717 -------LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNA-GYG--SLYAASLLKKLREDGVYMRPLGNVIYLMCG 786 (818)
Q Consensus 717 -------~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~-~~~--~~~a~~~~~~l~e~Gvlv~p~g~~ir~~pp 786 (818)
++.+.+.+ +++++.|.+|||.|+|++|++..+.... .++ ...+..+...|+++||++.+.+++++|.||
T Consensus 350 ~v~~~g~~l~~~L~~-l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g~~i~l~Pp 428 (460)
T PRK06105 350 NAAERGARLQARLRA-LADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPP 428 (460)
T ss_pred HHHHHHHHHHHHHHH-hhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecCCEEEEECC
Confidence 12223333 3678889999999999999997543211 111 234667889999999999998899999999
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHH
Q 003466 787 PCSSPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 787 l~~t~edId~~~~~l~~~l~~l~~ 810 (818)
+++|++|||+++++|+++++++.+
T Consensus 429 l~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 429 LIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred CccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988753
No 15
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.3e-67 Score=600.64 Aligned_cols=396 Identities=26% Similarity=0.421 Sum_probs=317.3
Q ss_pred hhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcc
Q 003466 354 PKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFG 433 (818)
Q Consensus 354 ~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~ 433 (818)
.+++..+.|+|+++...+....|.++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~l~ 80 (466)
T PRK07030 8 MQRDLKVLWHPCTQMKDHEQLPLIPIRRGEGV--WLEDFEGK----RYLDAVSSWWVNVFGHA-NPRINQRIKDQVDQLE 80 (466)
T ss_pred HhhhhcccccccccccccccCCCceEEeeecc--EEEECCCC----EEEEcchhHHhhcCCCC-CHHHHHHHHHHHHhcC
Confidence 34466778999987643322235678898886 79999999 99999999999999999 9999999999999988
Q ss_pred cccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEc
Q 003466 434 HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALK 513 (818)
Q Consensus 434 ~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~ 513 (818)
+....++.+++..+|+++|++.+|.+ +++|+|++|||||||+|||+| |.|+..+|. ++|.+||+|+
T Consensus 81 ~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAve~AlKlA-r~~~~~~g~------------t~r~~ii~~~ 146 (466)
T PRK07030 81 HVILAGFSHEPVIELSERLVKITPPG-LSRCFYADNGSSAIEVALKMS-FHYWRNRGK------------PRKKRFVTLT 146 (466)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHH-HHHHHHhCC------------CCCcEEEEEC
Confidence 76655678999999999999988744 689999999999999999999 677544443 5678999999
Q ss_pred CCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCc
Q 003466 514 GSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDS 593 (818)
Q Consensus 514 ~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~ 593 (818)
++|||+|.+++++++...++..+ ++. .++..+++.|+++++.. + ...
T Consensus 147 ~~yHG~t~ga~s~~~~~~~~~~~--------~p~--------~~~~~~~p~~~~~~~~~--------~---------~~~ 193 (466)
T PRK07030 147 NSYHGETLAAMSVGDVALFTETY--------KPL--------LLDTIKVPSPDCYLRPE--------G---------MSW 193 (466)
T ss_pred CCcCcccHHHHhccCCccccccC--------Ccc--------CCCCEEcCCCCcccccc--------C---------CCH
Confidence 99999999999999866554431 111 12334556665553211 0 011
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc
Q 003466 594 SDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET 673 (818)
Q Consensus 594 ~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~ 673 (818)
+.....+.+.+++.+. .+++++||||+||++|++||++++|++||++||++|++||++||+|||+|||||||++|
T Consensus 194 ~~~~~~~l~~le~~~~-----~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~ 268 (466)
T PRK07030 194 EEHSRRMFAHMEQTLA-----EHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF 268 (466)
T ss_pred HHHHHHHHHHHHHHHH-----hCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch
Confidence 2233445677888886 35689999999993399999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC-------hH-------------------HHH--------
Q 003466 674 TADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-------SK-------------------LWD-------- 719 (818)
Q Consensus 674 a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-------~~-------------------~~~-------- 719 (818)
+++++||+|||+|+||+|||||+|+||+++++++++.+... .+ +++
T Consensus 269 a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~ 348 (466)
T PRK07030 269 ACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENN 348 (466)
T ss_pred HHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999999999999999999999999999999999876321 00 111
Q ss_pred ----HHH---HHHHHcCCCeeEEEeeeeEEEEEEecCcccC-CC--chHHHHHHHHHHHhCCceEeecCCEEEEECCCCC
Q 003466 720 ----LEL---IQQISSHRTVQRVVALGTLCAIELQAAGCNA-GY--GSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCS 789 (818)
Q Consensus 720 ----~~l---~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~-~~--~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~ 789 (818)
+.+ ++.+.+++.+.+|||.|+|+++++..+.... ++ +...+..+.+.|+++||++.+.+++++|.||+++
T Consensus 349 ~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~i~~~Ppl~i 428 (466)
T PRK07030 349 RALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLGSVVYFLPPYVI 428 (466)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecCCEEEEECCccC
Confidence 112 2334568889999999999999997653211 11 1223567889999999999998899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 003466 790 SPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 790 t~edId~~~~~l~~~l~~l 808 (818)
|++||++++++++++++++
T Consensus 429 t~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 429 TPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987
No 16
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=5.6e-67 Score=598.51 Aligned_cols=398 Identities=20% Similarity=0.271 Sum_probs=315.7
Q ss_pred hhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcc
Q 003466 354 PKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFG 433 (818)
Q Consensus 354 ~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~ 433 (818)
.+.+..++|+|+++++.+....|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~ 83 (456)
T PRK07480 11 QALDAAHHLHPFSDMKALNEKGSRVITRAEGV--YLWDSEGN----KILDGMAGLWCVNVGYG-RKELADAAARQMRELP 83 (456)
T ss_pred HhhhhcccccCcccccccccCCCceEEeceee--EEEeCCCC----EEEEccchHHHhcCCCC-CHHHHHHHHHHHHhcC
Confidence 34456778999987755422357788898885 79999999 99999999999999999 9999999999999987
Q ss_pred cccC-CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEE
Q 003466 434 HVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLAL 512 (818)
Q Consensus 434 ~~~~-~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~ 512 (818)
+... .++.+++..+||++|++.+|.+ +++|+|++|||||||+|||+| |.|++.+|. ++|.+||+|
T Consensus 84 ~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AlklA-r~~~~~~g~------------~~r~~ii~~ 149 (456)
T PRK07480 84 YYNTFFKTTHPPAIELAAKLAEVAPPG-FNHVFFTNSGSEANDTVLRMV-RHYWALKGK------------PQKKVIISR 149 (456)
T ss_pred CcccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEE
Confidence 6542 2467999999999999998754 689999999999999999999 788765554 567899999
Q ss_pred cCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccC
Q 003466 513 KGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERD 592 (818)
Q Consensus 513 ~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~ 592 (818)
+++|||+|.+++++++...++.. .+ ++ .++..+++.|+++++.. + .+
T Consensus 150 ~~~yHG~tl~a~s~~g~~~~~~~--------~~----~~----~~~~~~~~~p~~~~~~~---------~--------~~ 196 (456)
T PRK07480 150 KNGYHGSTVAGASLGGMKYMHEQ--------GD----LP----IPGIVHIDQPYWFGEGG---------D--------MT 196 (456)
T ss_pred CCCcCCcchhhhhccCChhhhcc--------cC----CC----CCCCeecCCCccccccc---------C--------CC
Confidence 99999999999999986543331 01 00 12334556665554210 0 01
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc
Q 003466 593 SSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE 672 (818)
Q Consensus 593 ~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~ 672 (818)
.......+.+.+++.+.+ .+++++||||+||| |++||+++||++||++|+++|++||++||+|||||||||||++
T Consensus 197 ~~~~~~~~~~~l~~~~~~----~~~~~vAAvi~EPi-qg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 271 (456)
T PRK07480 197 PEEFGLAAARQLEAKILE----LGADNVAAFIGEPI-QGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEW 271 (456)
T ss_pred hHHHHHHHHHHHHHHHHh----cCCCcEEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcch
Confidence 122333345677665543 45679999999998 9999999999999999999999999999999999999999999
Q ss_pred chhcccCCCCcEEEecccccCCccccceeecchHHHhhcc--CCh--H-------------------HHH----------
Q 003466 673 TTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFV--GDS--K-------------------LWD---------- 719 (818)
Q Consensus 673 ~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~--~~~--~-------------------~~~---------- 719 (818)
|+++++||+|||+|+||+|||||+|+||+++++++++.+. ... + +++
T Consensus 272 ~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~ 351 (456)
T PRK07480 272 FGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRD 351 (456)
T ss_pred hhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999999999999999999999999999998872 110 0 110
Q ss_pred ---HHHH---HHHHcCCCeeEEEeeeeEEEEEEecCccc-CCCc--hHHHHHHHHHHHhCCceEeecCCEEEEECCCCCh
Q 003466 720 ---LELI---QQISSHRTVQRVVALGTLCAIELQAAGCN-AGYG--SLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSS 790 (818)
Q Consensus 720 ---~~l~---~~l~~~~~v~~vrg~Gl~~~iel~~~~~~-~~~~--~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t 790 (818)
+.+. +.+.+++.+.+|||.|+|++++++.+... ..+. ......+.+.|+++||++.+.+++++|.||+++|
T Consensus 352 ~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~l~~~Ppl~it 431 (456)
T PRK07480 352 DTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDRMIISPPLVIT 431 (456)
T ss_pred HHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecCCEEEEECCCCCC
Confidence 1121 22456788999999999999999765321 1111 1234567889999999999888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003466 791 PEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 791 ~edId~~~~~l~~~l~~l~~ 810 (818)
++|||+++++|++++.++.+
T Consensus 432 ~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 432 HAEIDELVEKARKALDATAA 451 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988754
No 17
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.6e-67 Score=598.91 Aligned_cols=397 Identities=27% Similarity=0.412 Sum_probs=317.9
Q ss_pred hhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcc
Q 003466 354 PKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFG 433 (818)
Q Consensus 354 ~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~ 433 (818)
.+++..++|+|++++..+....|+++++++|. ||||.||| +|||+++|+|+.++||+ ||+|++|+++|++++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~l~ 89 (460)
T PRK06916 17 SEKNKAYVWHPFTQMKDYLEEDPLIIERGEGR--KLYDVNGN----EYYDGVSSIWLNVHGHQ-VPELDEAIREQLNKIA 89 (460)
T ss_pred HHHHhhccccccccccccccCCCeeEEecccc--EEEeCCCC----EEEEcchhHHHhhcCCC-CHHHHHHHHHHHHhCC
Confidence 44556778999886543322457899998887 79999999 99999999999999999 9999999999999988
Q ss_pred cccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEc
Q 003466 434 HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALK 513 (818)
Q Consensus 434 ~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~ 513 (818)
+.......+++..+||++|++++|.+ +++|+|+||||||||+|||+| |.|+..+|. ++|.+||+|+
T Consensus 90 ~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseAve~AlklA-r~~~~~~g~------------tgr~~ii~~~ 155 (460)
T PRK06916 90 HSTLLGLANVPSILLAEKLIEVVPEG-LKKVFYSDSGATAVEIAIKMA-FQYWQNKGK------------PKKQRFVTLK 155 (460)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEEC
Confidence 76554567999999999999998754 689999999999999999999 777765554 6688999999
Q ss_pred CCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCc
Q 003466 514 GSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDS 593 (818)
Q Consensus 514 ~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~ 593 (818)
++|||+|.+++++++...++..| . +. .++..+++.|+.+++. ++ .+.
T Consensus 156 ~~YHG~t~~als~s~~~~~~~~~-----~---~~--------~~~~~~~p~p~~~~~~--------~~---------~~~ 202 (460)
T PRK06916 156 NAYHGDTIGAVSVGAIDLFHQVY-----S---SL--------LFEAIKMPYPYTYRSP--------YG---------NDK 202 (460)
T ss_pred CcCCcccHHhHhccCCccccccc-----C---CC--------CCCCEEeCCCcccccc--------cC---------CCh
Confidence 99999999999999866554431 1 00 1223455666554321 11 011
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc
Q 003466 594 SDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET 673 (818)
Q Consensus 594 ~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~ 673 (818)
+.....+.+.+++.++ .+++++||||+||++|++||+++||++||++|+++|++||++||+|||+|||||||++|
T Consensus 203 ~~~~~~~~~~l~~~l~-----~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~ 277 (460)
T PRK06916 203 AEIVKKHLEELEELLK-----EKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF 277 (460)
T ss_pred HHHHHHHHHHHHHHHH-----hCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh
Confidence 2233345577788886 35689999999994499999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC---------h-H----------------HHH--------
Q 003466 674 TADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD---------S-K----------------LWD-------- 719 (818)
Q Consensus 674 a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~---------~-~----------------~~~-------- 719 (818)
+++++||+|||+|+||+|||||+|+||+++++++++.+... . . +++
T Consensus 278 a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~ 357 (460)
T PRK06916 278 ACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQV 357 (460)
T ss_pred HHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 99999999999999999999999999999999999865310 0 0 111
Q ss_pred ----HH---HHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCC---chHHHHHHHHHHHhCCceEeecCCEEEEECCCCC
Q 003466 720 ----LE---LIQQISSHRTVQRVVALGTLCAIELQAAGCNAGY---GSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCS 789 (818)
Q Consensus 720 ----~~---l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~---~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~ 789 (818)
+. .++.+.+++.+.+|||.|+|+++++..+.....+ +...+..+.+.|+++||++.+.|++++|.||+++
T Consensus 358 ~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~l~~~Ppl~i 437 (460)
T PRK06916 358 ARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLGNTIVFMPPLAS 437 (460)
T ss_pred HHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecCCEEEEeCCccc
Confidence 11 1233445788999999999999999865322111 1223567889999999999998899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 003466 790 SPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 790 t~edId~~~~~l~~~l~~l~ 809 (818)
|++|||+++++|+++++++.
T Consensus 438 t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 438 TIDELDEMLRILYKAISDVT 457 (460)
T ss_pred CHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999998754
No 18
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.4e-66 Score=596.28 Aligned_cols=396 Identities=17% Similarity=0.206 Sum_probs=314.2
Q ss_pred hhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcc
Q 003466 354 PKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFG 433 (818)
Q Consensus 354 ~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~ 433 (818)
.+.+..+.|+|++++..+....|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-hp~v~~A~~~q~~~~~ 87 (460)
T PRK12403 15 QAADAAHHIHAFLDQKALNAEGPRVMVRGEGL--HLWDNDGK----RYLDGMSGLWCTNLGYG-RKDLAAAAARQMEQLP 87 (460)
T ss_pred HHhhhcccccccccccccccCCCceEEeceee--EEEeCCCC----EEEECchhHHhhcCCCC-CHHHHHHHHHHHHhCC
Confidence 34456778999987654322457889998886 79999999 99999999999999999 9999999999999988
Q ss_pred cccC-CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEE
Q 003466 434 HVMF-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLAL 512 (818)
Q Consensus 434 ~~~~-~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~ 512 (818)
+.+. .++.++++.+||++|++++|.+ +++|+|++|||||||+|||+| |.|++.+|. ++|.+||.+
T Consensus 88 ~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AiklA-r~~~~~~g~------------~~r~~ii~~ 153 (460)
T PRK12403 88 YYNMFFHTTHPAVIELSELLFSLLPGH-YSHAIYTNSGSEANEVLIRTV-RRYWQVLGK------------PQKKIMIGR 153 (460)
T ss_pred CeecccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHH-HHHHHhhCC------------CCCcEEEEE
Confidence 7543 2457899999999999998754 589999999999999999999 777654443 557789999
Q ss_pred cCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccC
Q 003466 513 KGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERD 592 (818)
Q Consensus 513 ~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~ 592 (818)
.++|||+|.+++++++.+.++.. +. ..++..+++.|++|++.. +. .
T Consensus 154 ~~~yHG~t~~~~s~s~~~~~~~~---------~~--------~~~~~~~~~~p~~~~~~~---------~~--------~ 199 (460)
T PRK12403 154 WNGYHGSTLAATALGGMKFMHEM---------GG--------LIPDVAHIDEPYWYANGG---------EL--------T 199 (460)
T ss_pred CCCcCcccHhhhhcCCCcccccc---------CC--------CCCCCEEeCCCccccccc---------CC--------C
Confidence 99999999999999986543321 00 012345666676654210 10 0
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc
Q 003466 593 SSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE 672 (818)
Q Consensus 593 ~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~ 672 (818)
.......+.+.+++.+.+ .+++++||||+||| |++||+++||++||++|+++|++||++||+|||||||||||++
T Consensus 200 ~~~~~~~~~~~le~~~~~----~~~~~iaavI~Epv-~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~ 274 (460)
T PRK12403 200 PAEFGRRAALQLEEKILE----LGAENVAGFVAEPF-QGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEW 274 (460)
T ss_pred hHHHHHHHHHHHHHHHHH----hCCCceEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh
Confidence 112233344667666643 34578999999998 9999999999999999999999999999999999999999999
Q ss_pred chhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC--------hH---------------HH-----------
Q 003466 673 TTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD--------SK---------------LW----------- 718 (818)
Q Consensus 673 ~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~--------~~---------------~~----------- 718 (818)
|+++++||+|||+|+||+|||||+|+||+++++++++.+... .. ++
T Consensus 275 ~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~ 354 (460)
T PRK12403 275 FAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKD 354 (460)
T ss_pred hhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 999999999999999999999988999999999999877421 00 11
Q ss_pred --HHHH----HHHHHcCCCeeEEEeeeeEEEEEEecCcccCCC-c--hHHHHHHHHHHHhCCceEeecCCEEEEECCCCC
Q 003466 719 --DLEL----IQQISSHRTVQRVVALGTLCAIELQAAGCNAGY-G--SLYAASLLKKLREDGVYMRPLGNVIYLMCGPCS 789 (818)
Q Consensus 719 --~~~l----~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~-~--~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~ 789 (818)
.+.+ .+..++++.+.+|||.|+|++++|+.+.....+ . ......+.+.|+++||++.+.+++++|+||+++
T Consensus 355 ~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~l~Ppl~i 434 (460)
T PRK12403 355 DTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVA 434 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecCCEEEEECCCCC
Confidence 0112 223356888999999999999999765322111 1 123455778889999999988888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 003466 790 SPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 790 t~edId~~~~~l~~~l~~l~ 809 (818)
|++|||+++++++++++++.
T Consensus 435 t~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 435 GRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998874
No 19
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-66 Score=591.21 Aligned_cols=387 Identities=21% Similarity=0.225 Sum_probs=309.8
Q ss_pred hhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccc
Q 003466 355 KRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGH 434 (818)
Q Consensus 355 ~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~ 434 (818)
+.+..++|+||+.+.. ..|+++++++|. ||||.||| +||||++|+|+.++||+ ||+|++|+++|++++.+
T Consensus 18 ~~~~~~~~~~~~~~~~---~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~ 87 (451)
T PRK06062 18 ALDRAHVFHSWSAQGK---INPMVIAGAEGS--YVWDYEGR----RYLDFSSQLVNTNIGHQ-HPKVVAAIQEQAARLCT 87 (451)
T ss_pred Hhhhhhcccccccccc---CCCceEEeceee--EEEECCCC----EEEEcccCHHhhcCCCC-CHHHHHHHHHHHHhcCC
Confidence 4455678999876422 357788888886 79999999 99999999999999999 99999999999999877
Q ss_pred ccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcC
Q 003466 435 VMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKG 514 (818)
Q Consensus 435 ~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~ 514 (818)
... .+.+++..+||++|++++|.+ +++|+|++|||||||+|||+| |.|++| .+||+|++
T Consensus 88 ~~~-~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGsEAve~AlklA-r~~tgr------------------~~ii~~~~ 146 (451)
T PRK06062 88 VAP-AHANDARSEAARLIAERAPGD-LSKVFFTNGGADANEHAVRMA-RLHTGR------------------PKVLSAYR 146 (451)
T ss_pred cCC-ccCCHHHHHHHHHHHHhCCCC-CCEEEEcCChHHHHHHHHHHH-HHhhCC------------------ceEEEEeC
Confidence 654 567999999999999998754 689999999999999999999 778654 58999999
Q ss_pred CCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCch
Q 003466 515 SYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSS 594 (818)
Q Consensus 515 sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~ 594 (818)
+|||+|.+++++++.+.++.. .| ..++..+++.|++++++ |.. ..+ .
T Consensus 147 ~yHG~t~~als~~~~~~~~~~--~~---------------~~~~~~~~~~p~~~~~~--------~~~-------~~~-~ 193 (451)
T PRK06062 147 SYHGGTGSAINLTGDPRRWPN--DT---------------GRAGVVHFFGPFLYRSE--------FHA-------TTE-E 193 (451)
T ss_pred CCCCCCHHHHhhcCCcccccC--CC---------------CCCCCEEeCCCCccccc--------cCC-------CCh-H
Confidence 999999999999975533211 00 01233445555544321 110 001 1
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch
Q 003466 595 DLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT 674 (818)
Q Consensus 595 ~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a 674 (818)
++...+.+.+++.|+. .+++++||||+||| |+++|+++||++||++|+++|++||++||+|||||||||||++|+
T Consensus 194 ~~~~~~~~~le~~l~~----~~~~~iAaviiEPv-~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a 268 (451)
T PRK06062 194 EECERALAHLERVIEL----EGPSTIAAILLESV-PGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFA 268 (451)
T ss_pred HHHHHHHHHHHHHHHh----cCCCceEEEEEccc-cCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHH
Confidence 2334456788888863 34578999999998 999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCcEEEecccccCCccccceeecchHHHhhccCCh--H-------------------HH------H--------
Q 003466 675 ADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDS--K-------------------LW------D-------- 719 (818)
Q Consensus 675 ~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~--~-------------------~~------~-------- 719 (818)
++++||+|||+||||+|||||+|+||+++++++++.+.... + ++ +
T Consensus 269 ~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~ 348 (451)
T PRK06062 269 IEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAE 348 (451)
T ss_pred HHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999874321 1 11 1
Q ss_pred ---HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccC-CCc-----hHHHHHHHHHHHhCCceEeecCCEEEEECCCCCh
Q 003466 720 ---LELIQQISSHRTVQRVVALGTLCAIELQAAGCNA-GYG-----SLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSS 790 (818)
Q Consensus 720 ---~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~-~~~-----~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t 790 (818)
+.+.+..++++.+.+|||.|+|+++++..+.... ..+ ...+..+++.|+++||++.+.++++||.||++||
T Consensus 349 ~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~lrl~ppl~~t 428 (451)
T PRK06062 349 VLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPPCTVT 428 (451)
T ss_pred HHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeecCCEEEEECCccCC
Confidence 1122222457889999999999999997542211 111 2346789999999999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003466 791 PEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 791 ~edId~~~~~l~~~l~~l~~ 810 (818)
++|||+++++|++++++++.
T Consensus 429 ~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 429 EDEVREGLAILDAALAVADA 448 (451)
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999988763
No 20
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1e-65 Score=586.45 Aligned_cols=378 Identities=19% Similarity=0.239 Sum_probs=302.3
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ||||.||| +||||+||+|+.++||+ ||+|++|+++|++++.+.....+.+++..+|+++|++
T Consensus 12 ~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~ 84 (443)
T PRK07483 12 TLPVAVAGEGI--YLIDATGK----RYLDASGGAAVSCLGHS-HPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVA 84 (443)
T ss_pred CCceEEeceEE--EEEeCCCC----EEEEcCccHhhhccCCC-CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHH
Confidence 47788888876 79999999 99999999999999999 9999999999999987554334678999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.+|.+ +++|+|++|||||||+|||+| |.|+..+|. ++|.+||+|+++|||+|.+++++++...++.
T Consensus 85 ~~p~~-~~~v~f~~sGsEAve~AlklA-r~~~~~~g~------------~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~ 150 (443)
T PRK07483 85 AAPAG-LEHVYFVSGGSEAVEAALKLA-RQYFVEIGQ------------PQRRHFIARRQSYHGNTLGALAIGGNAWRRE 150 (443)
T ss_pred hCCCC-CCEEEEcCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEECCCcCCcCHHHhhhcCCccccc
Confidence 88754 689999999999999999999 777655544 6688999999999999999999998654433
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. + ++.+ ++..+++.|++| ++.. . ......+...+.+.+++.+..
T Consensus 151 ~----~----~p~~--------~~~~~~~~~~~~------------~~~~--~--~~~~~~~~~~~~~~l~~~~~~---- 194 (443)
T PRK07483 151 P----F----APLL--------IEAHHVSPCYAY------------REQR--A--GESDEAYGQRLADELEAKILE---- 194 (443)
T ss_pred c----c----CCCC--------CCCEEeCCCccc------------cccc--c--CCCHHHHHHHHHHHHHHHHHh----
Confidence 2 1 1111 122344444333 2210 0 011123334456777776653
Q ss_pred CCCCcEEEEEEcccccc-CCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 615 KVSGCIGALIIEPVVHA-AGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g-~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
.+++++||||+||| |+ .||+++||++||++|+++|++||++||+|||||||||||++|+++++||+|||+|+||+|||
T Consensus 195 ~~~~~iAAvivEPi-qg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~g 273 (443)
T PRK07483 195 LGPDTVAAFVAETV-VGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGA 273 (443)
T ss_pred cCCCceEEEEEeCc-ccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhcc
Confidence 45679999999998 98 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCCh----H-----------------------------------HHHHHHHHHHHcCCCeeE
Q 003466 694 GVIPLAATLATNAVFDSFVGDS----K-----------------------------------LWDLELIQQISSHRTVQR 734 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~----~-----------------------------------~~~~~l~~~l~~~~~v~~ 734 (818)
||+|+||+++++++++.+.... + ++.+.+.+.+++++.+.+
T Consensus 274 G~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~ 353 (443)
T PRK07483 274 GYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGD 353 (443)
T ss_pred CccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeee
Confidence 9889999999999998764211 0 222333344567888999
Q ss_pred EEeeeeEEEEEEecCcccCCC---chHHHHHHHHHHHhCCceEeec--------CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 735 VVALGTLCAIELQAAGCNAGY---GSLYAASLLKKLREDGVYMRPL--------GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 735 vrg~Gl~~~iel~~~~~~~~~---~~~~a~~~~~~l~e~Gvlv~p~--------g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
|||.|+|+++++..+.....+ +...+..+.+.|+++||++.+. ++++||.||+++|++|||+++++|++
T Consensus 354 vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~ 433 (443)
T PRK07483 354 IRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGD 433 (443)
T ss_pred EeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 999999999999765322111 2235677899999999999864 47999999999999999999999999
Q ss_pred HHHHHHH
Q 003466 804 RLEEFDK 810 (818)
Q Consensus 804 ~l~~l~~ 810 (818)
+|.++.+
T Consensus 434 ~l~~~~~ 440 (443)
T PRK07483 434 AIDAALA 440 (443)
T ss_pred HHHHHHh
Confidence 9987654
No 21
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=3.8e-65 Score=584.03 Aligned_cols=400 Identities=24% Similarity=0.316 Sum_probs=316.9
Q ss_pred cchhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhh
Q 003466 352 DMPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAAR 431 (818)
Q Consensus 352 ~l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~ 431 (818)
++.+.+.+++||||++...+....|.++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Av~~q~~~ 83 (460)
T PRK06541 11 DLQALAKRHLWMHFTRHGAYIDAPVPVIVRGEGC--YIWDDRGK----RYLDGLAGLFVVQVGHG-RAELAEAAAKQAGT 83 (460)
T ss_pred HHHHHhhcccccCccCccccccCCCceEEeCccc--EEEeCCCC----EEEECCccHHhccCCCC-CHHHHHHHHHHHhh
Confidence 3456677899999998765432357788998886 79999999 99999999999999999 99999999999999
Q ss_pred cccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEE
Q 003466 432 FGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLA 511 (818)
Q Consensus 432 ~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~ 511 (818)
+.+.+...+.+++..+||++|++.+|.+ +++|+|++|||||||+|||+| |.|++.+|. ++|.+||+
T Consensus 84 ~~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseAve~AlklA-r~~~~~~g~------------~~r~~ii~ 149 (460)
T PRK06541 84 LAFFPLWSYAHPPAIELAERLAALAPGD-LNRVFFTTGGSEAVESAWKLA-KQYFKLTGK------------PGKHKVIS 149 (460)
T ss_pred CcCccccccCCHHHHHHHHHHHHhCCCC-cCEEEEcCCcHHHHHHHHHHH-HHHHHhcCC------------CCccEEEE
Confidence 8876545678999999999999988754 689999999999999999999 777654443 56789999
Q ss_pred EcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhccc
Q 003466 512 LKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEER 591 (818)
Q Consensus 512 ~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~ 591 (818)
|+++|||+|.+++++++.+.++..| .| . .++..+++.|+.++++ .|++
T Consensus 150 ~~~~yHG~t~~a~s~~~~~~~~~~~-~~-------~--------~~g~~~~~~~~~~~~~-------~~~~--------- 197 (460)
T PRK06541 150 RAIAYHGTTQGALAITGLPAFKAPF-EP-------L--------VPGGFRVPNTNFYRAP-------ELGD--------- 197 (460)
T ss_pred EcCcccCcchhhhcCcCChhhcccc-CC-------C--------CCCcEEeCCCcccccc-------ccCC---------
Confidence 9999999999999999866544321 01 0 1234455556544321 0111
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc
Q 003466 592 DSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV 671 (818)
Q Consensus 592 ~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~ 671 (818)
+...+...+.+.+++.++. .+++++||||+||| |+++|++++|++||++|+++|++||++||+|||||||||+|+
T Consensus 198 ~~~~~~~~~~~~l~~~l~~----~~~~~~Aavi~EPv-~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~ 272 (460)
T PRK06541 198 DPEAFGRWAADRIEEAIEF----EGPDTVAAVFLEPV-QNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGE 272 (460)
T ss_pred CHHHHHHHHHHHHHHHHHh----cCCCCEEEEEECCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch
Confidence 1123344556788888863 24678999999998 999999999999999999999999999999999999999999
Q ss_pred cchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCCh-------H----------------HHH---------
Q 003466 672 ETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDS-------K----------------LWD--------- 719 (818)
Q Consensus 672 ~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~-------~----------------~~~--------- 719 (818)
+|+++++|++|||+|+||+|||||+|+|++++++++++.+.... . ++.
T Consensus 273 ~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~ 352 (460)
T PRK06541 273 MFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVR 352 (460)
T ss_pred hhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHH
Confidence 99999999999999999999999889999999999988664210 0 111
Q ss_pred ---HHHH---HHHHcCCCeeEEEeeeeEEEEEEecCcccC-CCch-----HHHHHHHHHHHhCCceEeec--C-CEEEEE
Q 003466 720 ---LELI---QQISSHRTVQRVVALGTLCAIELQAAGCNA-GYGS-----LYAASLLKKLREDGVYMRPL--G-NVIYLM 784 (818)
Q Consensus 720 ---~~l~---~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~-~~~~-----~~a~~~~~~l~e~Gvlv~p~--g-~~ir~~ 784 (818)
+.+. +.+..++.+.++||.|+|++++|..+.... .+.. .....+++.|+++||++.+. | ++|||.
T Consensus 353 ~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~ 432 (460)
T PRK06541 353 DNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLA 432 (460)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEE
Confidence 1122 223347788999999999999997643211 1111 12246788999999999873 4 799999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 785 CGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 785 ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
||+++|++|||+++++|++++.++.
T Consensus 433 Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 433 PPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997653
No 22
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.8e-65 Score=580.40 Aligned_cols=380 Identities=29% Similarity=0.458 Sum_probs=306.1
Q ss_pred hhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcc
Q 003466 354 PKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFG 433 (818)
Q Consensus 354 ~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~ 433 (818)
.+.+.+++|+||++... ..++.++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~--~~~~~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~ 77 (429)
T PRK06173 7 LELDRQHIWHPYSSVTD--PIPVYPVERADGV--MITLKDGR----RLIDGMSSWWAALHGYN-HPRLNAAATNQLAKMS 77 (429)
T ss_pred hhhhhcccccccccccc--cCCCceEEeceee--EEEcCCCC----EEEEccchHHhccCCCC-CHHHHHHHHHHHHhcC
Confidence 34456778999876532 1233468888775 79999999 99999999999999999 9999999999999988
Q ss_pred cccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEc
Q 003466 434 HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALK 513 (818)
Q Consensus 434 ~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~ 513 (818)
+..+..+.+++..+|+++|++.+|.+ +++|+|++|||||||+|||+| |.|++.+|. ++|.+||+|+
T Consensus 78 ~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~AlklA-r~~~~~~g~------------~~r~~ii~~~ 143 (429)
T PRK06173 78 HIMFGGFTHEPAVELAQKLLEILPPS-LNKIFFADSGSVAVEVAMKMA-LQYQQAKGE------------VQRTKFATIR 143 (429)
T ss_pred CccccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCCchHHHHHHHHHH-HHHHHHhCC------------CCCcEEEEEC
Confidence 76655568999999999999998754 789999999999999999999 777765544 6688999999
Q ss_pred CCCCCCccccccccCCC-CCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccC
Q 003466 514 GSYHGDTLGAMEAQAPS-PYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERD 592 (818)
Q Consensus 514 ~sYHG~t~~als~tg~~-~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~ 592 (818)
++|||.|.+++++++.. .++.. +. +.. +...+++.|+.. ++
T Consensus 144 ~~yHG~t~~a~s~~~~~~~~~~~-----~~---~~~--------~~~~~~~~p~~~-----------~~----------- 185 (429)
T PRK06173 144 SGYHGDTWHAMSVCDPVTGMHGL-----FN---HSL--------PVQYFLPQPSIK-----------FG----------- 185 (429)
T ss_pred CCcCCcchhhhccCCCchhhhhc-----cc---ccC--------CCCeEeCCCCcc-----------cc-----------
Confidence 99999999999998743 23322 10 000 112334444321 10
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc
Q 003466 593 SSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE 672 (818)
Q Consensus 593 ~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~ 672 (818)
..+...+.+.+++.|+ .+++++||||+|||+|++||+++||++|+++|+++|++||++||+|||||||||||++
T Consensus 186 -~~~~~~~l~~l~~~i~-----~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~ 259 (429)
T PRK06173 186 -EEWNDEAIEPLQDLLE-----QKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKL 259 (429)
T ss_pred -hhHHHHHHHHHHHHHH-----hCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcc
Confidence 1222334567788886 3467899999999559999999999999999999999999999999999999999999
Q ss_pred chhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC-------h--H---------------HHH---------
Q 003466 673 TTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-------S--K---------------LWD--------- 719 (818)
Q Consensus 673 ~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-------~--~---------------~~~--------- 719 (818)
|+++++|++|||+||||+|+|||+|+|++++++++++.+... + . ++.
T Consensus 260 ~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~ 339 (429)
T PRK06173 260 FALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQ 339 (429)
T ss_pred hHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999999999999999999999999999876421 0 0 111
Q ss_pred ---HHHHHHH---HcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHH
Q 003466 720 ---LELIQQI---SSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEV 793 (818)
Q Consensus 720 ---~~l~~~l---~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~ed 793 (818)
+.+.+.| ..++.+.+|||.|+|+++++... ..+..+++.|+++||++.+.|++|||.||+++|++|
T Consensus 340 ~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~--------~~~~~i~~~l~e~Gi~v~~~g~~l~~~Ppl~it~~e 411 (429)
T PRK06173 340 RIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP--------VNMATLQPRFVEHGIWVRPFGKLVYIMPPFIISPDE 411 (429)
T ss_pred HHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc--------ccHHHHHHHHHHCCeEEEecCCEEEEeCCccCCHHH
Confidence 1223333 35677899999999999999754 125678899999999999988999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 003466 794 CSQLLLKLYQRLEEF 808 (818)
Q Consensus 794 Id~~~~~l~~~l~~l 808 (818)
||+++++|++++.++
T Consensus 412 i~~~~~~l~~~l~~~ 426 (429)
T PRK06173 412 LSQLTSGLLRVLKQE 426 (429)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999753
No 23
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.7e-64 Score=573.19 Aligned_cols=376 Identities=27% Similarity=0.427 Sum_probs=301.5
Q ss_pred chhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhc
Q 003466 353 MPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARF 432 (818)
Q Consensus 353 l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~ 432 (818)
|.+.+.+++|+|+++.. ..|.++++++|. |+||.||| +||||.+|+|+.++||+ ||+|++|+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~----~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~i~~ai~~q~~~~ 72 (422)
T PRK05630 4 LREFDHRHIWHPYAAPG----VRNRLVTSTDGV--FLTLEDGS----TVIDAMSSWWSAAHGHG-HPRLKAAAHKQIDTM 72 (422)
T ss_pred hhhccccccccCcccCC----CCCeeEEeceee--EEEECCCC----EEEEcchhHHHhcCCCC-CHHHHHHHHHHHHhC
Confidence 33445667899886522 357788888886 79999999 99999999999999999 999999999999998
Q ss_pred ccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEE
Q 003466 433 GHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLAL 512 (818)
Q Consensus 433 ~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~ 512 (818)
.+..+....+++..+|+++|++.+|.+ +++|+|++|||||||+|||+| |.|++.+|. ++|.+||+|
T Consensus 73 ~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AlklA-r~~~~~~g~------------~~r~~ii~~ 138 (422)
T PRK05630 73 SHVMFGGLTHEPAIKLTRKLLNLTDNG-LDHVFYSDSGSVSVEVAIKMA-LQYSKGQGH------------PERTRLLTW 138 (422)
T ss_pred CCcccCCcCCHHHHHHHHHHHhhCCCC-cCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEE
Confidence 876654567999999999999988754 689999999999999999999 777755444 668899999
Q ss_pred cCCCCCCccccccccCCC-CCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhccc
Q 003466 513 KGSYHGDTLGAMEAQAPS-PYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEER 591 (818)
Q Consensus 513 ~~sYHG~t~~als~tg~~-~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~ 591 (818)
+++|||+|.+++++++.. .++.. | .+ .. ++..+++.|.... .++
T Consensus 139 ~~~yHG~t~~als~~~~~~~~~~~----~-~~---~~--------~~~~~~p~~~~~~--------~~~----------- 183 (422)
T PRK05630 139 RSGYHGDTFAAMSVCDPEGGMHSL----W-KG---TL--------PEQIFAPAPPVRG--------SSP----------- 183 (422)
T ss_pred CCCcCCccHHHhccCCCccccccc----c-cc---cC--------CCCeEcCCCcccC--------CCh-----------
Confidence 999999999999998743 22221 1 10 00 1122333332110 000
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc
Q 003466 592 DSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV 671 (818)
Q Consensus 592 ~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~ 671 (818)
.....|.+.+++.+. +++||||+||++|++||+++||++|+++|+++|++||++||+|||||||||||+
T Consensus 184 ---~~~~~~~~~~~~~~~--------~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~ 252 (422)
T PRK05630 184 ---QEISEYLRSLELLID--------ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGE 252 (422)
T ss_pred ---HHHHHHHHHHHHHHh--------hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCch
Confidence 112234566666663 489999999955999999999999999999999999999999999999999999
Q ss_pred cchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC--------hH-----------------HHH-------
Q 003466 672 ETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD--------SK-----------------LWD------- 719 (818)
Q Consensus 672 ~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~--------~~-----------------~~~------- 719 (818)
+|+++++||.|||+|+||+|||||+|+||+++++++++.+... .. +++
T Consensus 253 ~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~ 332 (422)
T PRK05630 253 LFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQ 332 (422)
T ss_pred hhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHH
Confidence 9999999999999999999999999999999999999877421 10 111
Q ss_pred -----HHHH---HHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChH
Q 003466 720 -----LELI---QQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSP 791 (818)
Q Consensus 720 -----~~l~---~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~ 791 (818)
+.+. +.+.+++.|.+|||.|+|+++++..+ ..+..+.+.|+++||++.+.|++++|.||+++|+
T Consensus 333 ~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~--------~~~~~~~~~~~~~Gl~~~~~g~~l~~~PpL~it~ 404 (422)
T PRK05630 333 VKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQP--------VDMEEATQAAVDHGVWLRPFGRLVYVMPPYITTS 404 (422)
T ss_pred HHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCc--------ccHHHHHHHHHHCCeEEEecCCEEEEECCccCCH
Confidence 1122 23445778999999999999999754 1245788899999999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 003466 792 EVCSQLLLKLYQRLEE 807 (818)
Q Consensus 792 edId~~~~~l~~~l~~ 807 (818)
+|||+++++|++++++
T Consensus 405 ~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 405 EQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999864
No 24
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=2e-64 Score=572.81 Aligned_cols=376 Identities=28% Similarity=0.439 Sum_probs=302.1
Q ss_pred hhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccc
Q 003466 356 RAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHV 435 (818)
Q Consensus 356 ~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~ 435 (818)
.+.+++|+|++++.. ..+|.++++++|. ++||.||| +|||+++|+|++++||+ ||+|++|+++|++++.+.
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~ 78 (428)
T PRK07986 8 FDQRHIWHPYTSMTS--PLPVYPVVSAEGC--ELILADGR----RLVDGMSSWWAAIHGYN-HPQLNAAMKSQIDAMSHV 78 (428)
T ss_pred ccccccccCCccccc--CCCCeeEEeeeee--EEEeCCCC----EEEEcchhHHhhcCCCC-CHHHHHHHHHHHhhcCCc
Confidence 345678999987643 2345788888886 79999999 99999999999999999 999999999999998876
Q ss_pred cCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCC
Q 003466 436 MFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGS 515 (818)
Q Consensus 436 ~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~s 515 (818)
.+....+++..+|+++|++.+|.+ +++|+|++|||||||+|||+| |.|++.+| .+|.+||+|+++
T Consensus 79 ~~~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~SGsEAve~AlklA-r~~~~~~g-------------~~r~kii~~~~~ 143 (428)
T PRK07986 79 MFGGITHPPAIELCRKLVAMTPQP-LECVFLADSGSVAVEVAMKMA-LQYWQAKG-------------EPRQRFLTLRHG 143 (428)
T ss_pred cccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCCcHHHHHHHHHHH-HHHHHhcC-------------CCCcEEEEECCC
Confidence 654567999999999999998754 689999999999999999999 67754332 346799999999
Q ss_pred CCCCccccccccCCC-CCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCch
Q 003466 516 YHGDTLGAMEAQAPS-PYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSS 594 (818)
Q Consensus 516 YHG~t~~als~tg~~-~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~ 594 (818)
|||.|.+++++++.. .++.. +.+ . .++..+++.|++.. . +
T Consensus 144 yHG~t~~a~s~~~~~~~~~~~-----~~~---~--------~~~~~~~~~p~~~~-----------~------------~ 184 (428)
T PRK07986 144 YHGDTFGAMSVCDPDNSMHSL-----YKG---Y--------LPENLFAPAPQSRF-----------D------------G 184 (428)
T ss_pred cCCCcHhhhcccCCchhhhhc-----cCC---C--------CCCCEEECCCCccc-----------c------------h
Confidence 999999999998743 22221 111 0 01223344443210 0 0
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch
Q 003466 595 DLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT 674 (818)
Q Consensus 595 ~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a 674 (818)
.....+.+.+++.|+ ..+++++|||+||++|++||++++|++||++|+++|++||++||+|||||||||+|++|+
T Consensus 185 ~~~~~d~~~l~~~l~-----~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa 259 (428)
T PRK07986 185 EWDERDIAPFARLMA-----AHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFA 259 (428)
T ss_pred hhHHHHHHHHHHHHH-----hCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeee
Confidence 011112356777776 345789999999966999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCcEEEecccccCCccccceeecchHHHhhccCCh-----H-------------------HHH-----------
Q 003466 675 ADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDS-----K-------------------LWD----------- 719 (818)
Q Consensus 675 ~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~-----~-------------------~~~----------- 719 (818)
++++||+|||+|+||+|||||+|+||+++++++++.+.... + +++
T Consensus 260 ~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~ 339 (428)
T PRK07986 260 CEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAI 339 (428)
T ss_pred ecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999999999999999875421 1 111
Q ss_pred -HHH---HHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHH
Q 003466 720 -LEL---IQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCS 795 (818)
Q Consensus 720 -~~l---~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId 795 (818)
+.+ ++.+.+++.+.+|||.|+|+++++..+. .+..+++.|+++||++.+.|++|+|.||+++|++||+
T Consensus 340 g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~--------~~~~~~~~l~~~Gl~~~~~g~~i~~~Ppl~it~~ei~ 411 (428)
T PRK07986 340 EAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV--------NMAALQRFFVEQGVWIRPFGKLIYLMPPYIILPEQLQ 411 (428)
T ss_pred HHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc--------cHHHHHHHHHHCCcEEEecCCEEEEeCCCCCCHHHHH
Confidence 112 2233457889999999999999997541 2557889999999999998899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003466 796 QLLLKLYQRLEE 807 (818)
Q Consensus 796 ~~~~~l~~~l~~ 807 (818)
+++++|++++++
T Consensus 412 ~~~~~l~~~l~~ 423 (428)
T PRK07986 412 RLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHhh
Confidence 999999999853
No 25
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=4.7e-64 Score=573.15 Aligned_cols=388 Identities=21% Similarity=0.309 Sum_probs=310.0
Q ss_pred cCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC
Q 003466 358 GELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF 437 (818)
Q Consensus 358 ~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~ 437 (818)
.+++|+||+++..+. ..|.++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+.+.
T Consensus 15 ~~~~~~~~~~~~~~~-~~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~l~~~~~ 86 (445)
T PRK09221 15 LDAHWMPFTANRQFK-AAPRLLVSAEGM--YYTDADGR----KILDGTAGLWCCNAGHG-RPEIVEAVARQAATLDYAPA 86 (445)
T ss_pred hhhcccCcccccccC-CCCceEEecccc--EEEeCCCC----EEEEccccHhhccCCCC-CHHHHHHHHHHHHhccCccc
Confidence 456899998765442 357888898886 79999999 99999999999999999 99999999999999887665
Q ss_pred CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCC
Q 003466 438 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYH 517 (818)
Q Consensus 438 ~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYH 517 (818)
..+.+++..+|+++|++.+|.+ +++|+|++|||||||+|||+| |.|++.+|. ++|.+||+|+++||
T Consensus 87 ~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~sGseAve~AlklA-r~~~~~~g~------------~~r~~ii~~~~~yH 152 (445)
T PRK09221 87 FQMGHPLAFELAERLAELAPGG-LDHVFFTNSGSESVDTALKIA-LAYHRARGQ------------GTRTRLIGRERGYH 152 (445)
T ss_pred cccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEECCCcC
Confidence 5567999999999999998754 689999999999999999999 778765443 55789999999999
Q ss_pred CCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcc-hhhhhccccccccccCccchhhcccCchhH
Q 003466 518 GDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPE-WLYSKIVEHKDITFCSRDEIFYEERDSSDL 596 (818)
Q Consensus 518 G~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~-~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~ 596 (818)
|+|.+++++++.+.++.. |.+ . .++..+++.|+ ++++ .+... ....
T Consensus 153 G~t~gals~~~~~~~~~~-----~~~---~--------~~~~~~~~~~~~~~~~---------------~~~~~--~~~~ 199 (445)
T PRK09221 153 GVGFGGISVGGIVNNRKM-----FGG---L--------LPGVDHLPHTLDLPEN---------------AFSKG--QPEH 199 (445)
T ss_pred ccchhhhccCCChhhhhc-----cCC---C--------CCCCeEeCCCcccccc---------------ccCCC--hHHH
Confidence 999999999986654432 111 0 01223444443 2211 01100 1122
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhc
Q 003466 597 ASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTAD 676 (818)
Q Consensus 597 ~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e 676 (818)
...+.+.+++.++. .+.+++||||+||| |+++|+++||++||++|+++|++||++||+|||||||||||++|+++
T Consensus 200 ~~~~~~~l~~~i~~----~~~~~iAavi~Epv-~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~ 274 (445)
T PRK09221 200 GAELADDLERLVAL----HDASTIAAVIVEPM-AGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAE 274 (445)
T ss_pred HHHHHHHHHHHHHh----cCCCcEEEEEEecc-cCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHH
Confidence 33445678887863 23478999999998 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEecccccCCccccceeecchHHHhhccCC---------hH-----------------HHH-----------
Q 003466 677 LLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD---------SK-----------------LWD----------- 719 (818)
Q Consensus 677 ~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~---------~~-----------------~~~----------- 719 (818)
++|++|||+|+||+|||||+|+|++++++++++.+... +. +++
T Consensus 275 ~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~ 354 (445)
T PRK09221 275 RFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAEL 354 (445)
T ss_pred hcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 99999999999999999999999999999999876421 00 111
Q ss_pred -HHHHH---HHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHH
Q 003466 720 -LELIQ---QISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCS 795 (818)
Q Consensus 720 -~~l~~---~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId 795 (818)
+.+.+ .+..++.+.+|||.|+|+++++.... .. +...+..+.+.|+++||++.+.++++||+||+++|++|||
T Consensus 355 g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~--~~-~~~~~~~~~~~~~~~Gv~~~~~~~~lr~~Ppl~~t~~eid 431 (445)
T PRK09221 355 APYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRP--GA-PGARGYEAFMKCFEKGLLVRYTGDTIALSPPLIIEKAQID 431 (445)
T ss_pred HHHHHHHHHhhccCCCEEEEecCceEEEEEEeccc--cc-ccchHHHHHHHHHHCCeEEeecCCEEEEECCccCCHHHHH
Confidence 11222 23456788999999999999997531 11 1134567889999999999988899999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 003466 796 QLLLKLYQRLEEF 808 (818)
Q Consensus 796 ~~~~~l~~~l~~l 808 (818)
+++++|++++.++
T Consensus 432 ~~~~~l~~~l~~~ 444 (445)
T PRK09221 432 ELVDALGDALRAV 444 (445)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999764
No 26
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-64 Score=572.20 Aligned_cols=373 Identities=23% Similarity=0.260 Sum_probs=297.2
Q ss_pred EEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccC
Q 003466 378 VIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG 457 (818)
Q Consensus 378 vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~ 457 (818)
++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+.....+.+++..+|+|+|++.+|
T Consensus 16 ~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p 88 (447)
T PRK06917 16 VISHGKGV--YLYDQNGN----KYFDGSSGAVTAGIGHG-VKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSP 88 (447)
T ss_pred eEEeeeee--EEEeCCCC----EEEECchhHHhccCCCC-CHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCC
Confidence 57888776 79999999 99999999999999999 9999999999999986654434678999999999999987
Q ss_pred CCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCC
Q 003466 458 KGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQ 537 (818)
Q Consensus 458 ~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~ 537 (818)
.+ +++++|++|||||||+|||+| |+|+..+|. ++|.+||+|+++|||+|.+++++++...++..|
T Consensus 89 ~~-~~~v~f~~sGsEAve~AlklA-r~~~~~rg~------------t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~- 153 (447)
T PRK06917 89 GD-LNWSFFVNSGSEANETAMKIA-IQHFQERGI------------QGKHKILSRWMSYHGITMGALSMSGHPLRRQRF- 153 (447)
T ss_pred CC-CCEEEEeCChHHHHHHHHHHH-HHHHHhcCC------------CCCCEEEEECCCcCCccHHHHHhcCCccccccC-
Confidence 54 579999999999999999999 667655554 678899999999999999999998865444321
Q ss_pred CCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCC
Q 003466 538 QPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVS 617 (818)
Q Consensus 538 ~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~ 617 (818)
.| .+ ++..+++.|.+++++ +++ +...+...+.+.+++.++. .++
T Consensus 154 ~~-------~~--------~~~~~~~~p~~~~~~--------~~~---------~~~~~~~~~~~~le~~i~~----~~~ 197 (447)
T PRK06917 154 VS-------LL--------EDYPTISAPYCYRCP--------VQK---------VYPTCQLACATELETAIER----IGA 197 (447)
T ss_pred CC-------CC--------CCCeEeCCCcccccc--------cCC---------ChHHHHHHHHHHHHHHHHh----cCC
Confidence 01 00 112233444433211 111 1122334455778888863 234
Q ss_pred CcEEEEEEcccccc-CCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCcc
Q 003466 618 GCIGALIIEPVVHA-AGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVI 696 (818)
Q Consensus 618 ~~iAAVIvEPV~~g-~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~ 696 (818)
+++||||+||| |+ .||+++||++||++|+++|++||++||+|||+|||||||++|+++++||+|||+|+||+|||||+
T Consensus 198 ~~iAAvi~EPi-~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~ 276 (447)
T PRK06917 198 EHIAAFIAEPI-IGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYT 276 (447)
T ss_pred CceEEEEEecc-ccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEeeehhccCCc
Confidence 68999999998 87 57899999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccceeecchHHHhhccCCh-------H--------------------------------HHHHHHHHHHHcCCCeeEEEe
Q 003466 697 PLAATLATNAVFDSFVGDS-------K--------------------------------LWDLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~~~-------~--------------------------------~~~~~l~~~l~~~~~v~~vrg 737 (818)
|+||+++++++++.+.... . .+.+.+.+..++++.+.+|||
T Consensus 277 Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 356 (447)
T PRK06917 277 PIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRG 356 (447)
T ss_pred ceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEee
Confidence 9999999999998764311 0 111223333346888999999
Q ss_pred eeeEEEEEEecCcccC-CC--chHHHHHHHHHHHhCCceEeec--------CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 738 LGTLCAIELQAAGCNA-GY--GSLYAASLLKKLREDGVYMRPL--------GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 738 ~Gl~~~iel~~~~~~~-~~--~~~~a~~~~~~l~e~Gvlv~p~--------g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
.|+|++++|+.+.... .. +...+..+.+.|+++||++.+. ++++++.||+++|++|||+++++|+++++
T Consensus 357 ~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~ 436 (447)
T PRK06917 357 KGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVE 436 (447)
T ss_pred cceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 9999999997653211 11 2245778899999999999874 57999999999999999999999999998
Q ss_pred HHH
Q 003466 807 EFD 809 (818)
Q Consensus 807 ~l~ 809 (818)
++.
T Consensus 437 ~~~ 439 (447)
T PRK06917 437 EMM 439 (447)
T ss_pred HHH
Confidence 873
No 27
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=6.7e-64 Score=571.42 Aligned_cols=388 Identities=22% Similarity=0.310 Sum_probs=308.7
Q ss_pred cCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC
Q 003466 358 GELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF 437 (818)
Q Consensus 358 ~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~ 437 (818)
....|+|+++...+. ..|.++++++|. |+||.||| +||||.+|+|+.++||+ ||+|++|+++|++++.+...
T Consensus 12 ~~~~~~~~~~~~~~~-~~p~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~l~~~~~ 83 (442)
T PRK13360 12 LSAFWMPFTANRQFK-KAPRLLVAAKGM--YYTTHDGR----RVLDGTAGLWCVNAGHG-RPEIVEAVRAQAGELDYAPA 83 (442)
T ss_pred ccccccCcccccccc-CCCceEEeeeee--EEEeCCCC----EEEECchhHHHhccCCC-CHHHHHHHHHHHHhCCCccc
Confidence 345788887754432 357788898886 79999999 99999999999999999 99999999999999877655
Q ss_pred CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCC
Q 003466 438 PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYH 517 (818)
Q Consensus 438 ~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYH 517 (818)
.+..+++..+||++|++.+|.+ +++|+|++|||||||+|||+| |.|++.+|. ++|.+||+|+++||
T Consensus 84 ~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~AlklA-r~~~~~~g~------------~~r~~ii~~~~~yH 149 (442)
T PRK13360 84 FQMGHPKAFELANRIAEIAPGG-LNHVFFTNSGSESVDTALKIA-LAYHRARGE------------GSRTRLIGRERGYH 149 (442)
T ss_pred CCcCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEEcCCcC
Confidence 4567999999999999998744 689999999999999999999 777655443 45789999999999
Q ss_pred CCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcch-hhhhccccccccccCccchhhcccCchhH
Q 003466 518 GDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEW-LYSKIVEHKDITFCSRDEIFYEERDSSDL 596 (818)
Q Consensus 518 G~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~-~~~~~~~~~~~~~nd~~~~~~~~~~~~~~ 596 (818)
|+|.+++++++...++..| +... ++..+++.|+. +++ .|.. .....
T Consensus 150 G~t~gals~tg~~~~~~~~--------~~~~--------~~~~~~p~~~~~~~~---------------~~~~--~~~~~ 196 (442)
T PRK13360 150 GVGFGGISVGGIVPNRKAF--------GALL--------PGVDHLPHTLDLARN---------------AFSK--GQPEH 196 (442)
T ss_pred CccHhhhhccCChhhhhcc--------CCCC--------CCCEEeCCCchhhcc---------------ccCC--ChHHH
Confidence 9999999999876554431 1110 11233443321 110 0110 01123
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhc
Q 003466 597 ASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTAD 676 (818)
Q Consensus 597 ~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e 676 (818)
...+.+.+++.++. .+++++||||+||| |+++|+++||++||++|+++|++||++||+|||||||||||++|+++
T Consensus 197 ~~~~~~~le~~l~~----~~~~~~aavivEpi-~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~ 271 (442)
T PRK13360 197 GAELADELERLVTL----HDASTIAAVIVEPV-AGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQ 271 (442)
T ss_pred HHHHHHHHHHHHHh----cCCCcEEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhh
Confidence 33456778888863 34578999999998 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEecccccCCccccceeecchHHHhhccCCh-------H-------------------HHH-----------
Q 003466 677 LLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDS-------K-------------------LWD----------- 719 (818)
Q Consensus 677 ~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~-------~-------------------~~~----------- 719 (818)
++||+|||+|+||+|||||+|+||+++++++++.+.... + +++
T Consensus 272 ~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~ 351 (442)
T PRK13360 272 YFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARL 351 (442)
T ss_pred hcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999999999999999998764310 0 111
Q ss_pred -HHHH---HHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHH
Q 003466 720 -LELI---QQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCS 795 (818)
Q Consensus 720 -~~l~---~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId 795 (818)
+.+. +.+.+++.+.+|||.|+++++++.... .. +...+..+++.|+++||++.+.++++||+||+++|++|||
T Consensus 352 g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~--~~-~~~~~~~~~~~l~~~Gvl~~~~~~~lr~~Ppl~~t~~eid 428 (442)
T PRK13360 352 APYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRD--GK-PGKRAYEVFLKCFEKGLMIRYTGDILALSPPLIIEEAQID 428 (442)
T ss_pred HHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCC--CC-cchhHHHHHHHHHHCCcEEEecCCEEEEeCCCccCHHHHH
Confidence 1122 233457788999999999999997532 11 1234667888999999999988899999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 003466 796 QLLLKLYQRLEEF 808 (818)
Q Consensus 796 ~~~~~l~~~l~~l 808 (818)
+++++|+++++++
T Consensus 429 ~~~~~l~~~l~~~ 441 (442)
T PRK13360 429 ELFDILAQALKET 441 (442)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999764
No 28
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=6e-63 Score=566.10 Aligned_cols=370 Identities=18% Similarity=0.166 Sum_probs=289.8
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|+++..+.....+.++...+|+++|++
T Consensus 45 ~p~~i~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~ 117 (464)
T PRK06938 45 IPLALKRARGI--YVEDVEGR----QFIDCLAGAGTLALGHN-HPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFA 117 (464)
T ss_pred CCceEEecccc--EEEeCCCC----EEEEccCCccccccCCC-CHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHH
Confidence 36688888886 79999999 99999999999999999 9999999999998633222224678999999999999
Q ss_pred ccCCCCC--CcEEEe-CChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC
Q 003466 455 GVGKGWA--SRAYFS-DNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP 531 (818)
Q Consensus 455 ~~~~~~l--~~v~f~-~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~ 531 (818)
.+|.+.. ++++|+ ||||||||+|||+| |.|++| .+||+++++|||+|.+++++++...
T Consensus 118 ~~p~~~~~~~~v~f~~~SGSEAve~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~als~t~~~~ 178 (464)
T PRK06938 118 SLPEAFAREAKIQFCGPTGTDAVEAALKLV-KTATGR------------------STVLSFQGGYHGMSQGALSLMGNLG 178 (464)
T ss_pred hCcccccccceEEEeCCCcHHHHHHHHHHH-HHhhCC------------------CeEEEECCccCCccHHHHhhcCCcc
Confidence 8874311 378776 79999999999999 777654 5899999999999999999998654
Q ss_pred CCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcC
Q 003466 532 YTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQN 611 (818)
Q Consensus 532 ~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~ 611 (818)
++.. +. .. .++..+++.|+.++++ |+. ..+.....+.+.+++.+++.
T Consensus 179 ~~~~-----~~---~~--------~~~~~~~~~p~~~~~~--------~~~---------~~~~~~~~~~~~l~~~i~~~ 225 (464)
T PRK06938 179 PKKP-----LG---AL--------LPGVQFLPYPYDYRCP--------FGL---------GGEAGVRANLHYLENLLDDP 225 (464)
T ss_pred cccc-----CC---CC--------CCCcEEeCCCcccccc--------ccC---------chhhHHHHHHHHHHHHHHhh
Confidence 4332 11 00 1123456666544321 110 11222334567788888631
Q ss_pred CCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccc
Q 003466 612 PGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLL 691 (818)
Q Consensus 612 ~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgL 691 (818)
. .+++++||||+||| |++||+++||++||++|+++|++||++||+|||+|||||||++|+++++||+|||+|+||+|
T Consensus 226 ~--~~~~~iAAvI~EPi-qg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKgl 302 (464)
T PRK06938 226 E--SGVVLPAAVILEVV-QGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAI 302 (464)
T ss_pred c--cCCCceEEEEEccc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccc
Confidence 0 12358999999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEE
Q 003466 692 TGGVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVV 736 (818)
Q Consensus 692 ggGy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vr 736 (818)
||| +|+||+++++++ +.+..... ++.+.+.+..++++.+.+||
T Consensus 303 ggG-~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~Vr 380 (464)
T PRK06938 303 GGS-LPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVR 380 (464)
T ss_pred cCC-CceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeee
Confidence 999 799999999886 65532111 11222333335689999999
Q ss_pred eeeeEEEEEEecCcccC------CCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 737 ALGTLCAIELQAAGCNA------GYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 737 g~Gl~~~iel~~~~~~~------~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
|.|+|++++|+.+.... ..+...+..+.+.|+++||++.+. +++|||.||++||++|||++++++++++.+
T Consensus 381 G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 381 GRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred ccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 99999999997542211 112345677889999999999874 489999999999999999999999999976
Q ss_pred H
Q 003466 808 F 808 (818)
Q Consensus 808 l 808 (818)
+
T Consensus 461 ~ 461 (464)
T PRK06938 461 A 461 (464)
T ss_pred H
Confidence 4
No 29
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-63 Score=564.56 Aligned_cols=352 Identities=22% Similarity=0.252 Sum_probs=290.2
Q ss_pred CeEEEEeecC-CeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHH
Q 003466 375 AVTVIDSRCG-ENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 375 ~~~vi~~~~G-~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
.|.++.+++| . |+||.||| +||||.+|+|+.++||+ ||+|++|+++|++++.+.+. ...+++..+||++|+
T Consensus 63 ~~~~~~~~~G~~--~l~D~dG~----~ylD~~~g~~~~~lGH~-~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~lae~L~ 134 (459)
T PRK11522 63 YGAVEWQAGGLN--TLVDTQGQ----EFIDCLGGFGIFNVGHR-NPVVVSAVQNQLAKQPLHSQ-ELLDPLRAMLAKTLA 134 (459)
T ss_pred CCeeEEeccCeE--EEEECCCC----EEEECCcCHHhhhcCCC-CHHHHHHHHHHHhhCccccc-ccCCHHHHHHHHHHH
Confidence 4568888888 6 79999999 99999999999999999 99999999999999876542 456899999999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
+.+|.+ +++|+|+||||||||+|||+| |.||+++ +|.+||+++++|||+|.+++++++...++
T Consensus 135 ~~~p~~-~~~v~f~~SGsEAve~AlklA-r~~t~~~---------------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~ 197 (459)
T PRK11522 135 ALTPGK-LKYSFFCNSGTESVEAALKLA-KAYQSPR---------------GKFTFIATSGAFHGKSLGALSATAKSTFR 197 (459)
T ss_pred HhCCCC-CCEEEEeCCchHHHHHHHHHH-HHHhccC---------------CCcEEEEecCCCCCCcHHHhhhcCCcccc
Confidence 988754 589999999999999999999 8888653 25789999999999999999999866554
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
.+| ++. .| ++.++ +|||. +.+++.|+...
T Consensus 198 ~~~--------~~~--~~------~~~~~----------------~~~d~------------------~~l~~~l~~~~- 226 (459)
T PRK11522 198 KPF--------MPL--LP------GFRHV----------------PFGNI------------------EAMRTALSECK- 226 (459)
T ss_pred cCC--------CCC--CC------CCccc----------------CCCCH------------------HHHHHHHHHhh-
Confidence 321 111 01 11121 25542 33445554210
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
.+++++||||+||| |+++|+++||++||++|+++|++||++||+|||||||||||++|+++++||+|||+|+||+|||
T Consensus 227 -~~~~~iAavIvEpv-~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lgg 304 (459)
T PRK11522 227 -KTGDDVAAVILEPI-QGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGG 304 (459)
T ss_pred -ccCCcEEEEEEecc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhhC
Confidence 24578999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCCh--H-----------------------------------HHHHHHHHHHHcCC-CeeEE
Q 003466 694 GVIPLAATLATNAVFDSFVGDS--K-----------------------------------LWDLELIQQISSHR-TVQRV 735 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~--~-----------------------------------~~~~~l~~~l~~~~-~v~~v 735 (818)
||+|+||+++++++++.+.... . ++.+.+.+...+++ .+.+|
T Consensus 305 G~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~V 384 (459)
T PRK11522 305 GVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEA 384 (459)
T ss_pred CCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeE
Confidence 9999999999999988763211 0 11122222234677 68999
Q ss_pred EeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhH
Q 003466 736 VALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVE 812 (818)
Q Consensus 736 rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~ 812 (818)
||.|+|+++++..+ ..+..+++.|+++||++.+. ++++||.||+++|++|||+++++|+++++++.+..
T Consensus 385 rG~Gl~~giel~~~--------~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~~~ 456 (459)
T PRK11522 385 RGKGMLMAIEFVDN--------EIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRVSV 456 (459)
T ss_pred EeceeEEEEEecCc--------hHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999865 34677899999999999864 48999999999999999999999999998877543
No 30
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-62 Score=563.55 Aligned_cols=376 Identities=22% Similarity=0.283 Sum_probs=300.6
Q ss_pred CccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCC
Q 003466 359 ELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFP 438 (818)
Q Consensus 359 ~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~ 438 (818)
+++|+|++.. ..|+++++++|. ++||.||| +||||++ .|+.++||+ ||+|++|+++|++++.+.. .
T Consensus 43 ~~~~~~~~~~-----~~~~~i~~a~G~--~l~D~dG~----~ylD~~g-~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~-~ 108 (459)
T PRK06082 43 EVFLHQAMST-----PCLDVLASAEGI--YIEDVDGK----KYMDFHG-NNVHQLGYG-HPHVIEKVKEQMAKLPFSP-R 108 (459)
T ss_pred HHhcccccCC-----CCCceEEeeeee--EEEECCCC----EEEEccc-HhhcccCCC-CHHHHHHHHHHHHhCCCcc-C
Confidence 4467776432 236788898886 79999999 9999985 599999999 9999999999999987654 2
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
.+.++++.+||++|++++|.+ +++|+|++|||||||+|+|+| |.|+++ .+||+|+++|||
T Consensus 109 ~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~AlklA-r~~tgr------------------~~ii~~~~~yHG 168 (459)
T PRK06082 109 RFTNETAIECAEKLTEIAGGE-LNRVLFAPGGTSAIGMALKLA-RHITGN------------------FKVVSLWDSFHG 168 (459)
T ss_pred ccCCHHHHHHHHHHHHhCCCC-CCEEEECCCcHHHHHHHHHHH-HHhcCC------------------CEEEEEeCCCcC
Confidence 467899999999999998743 579999999999999999999 777654 589999999999
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
+|.+++++++.+.++..| ++. .+++.+++.|+.++++ |++. +.+..
T Consensus 169 ~t~~a~s~~~~~~~~~~~--------~~~--------~~~~~~~~~~~~~~~~--------~~~~----------~~~~~ 214 (459)
T PRK06082 169 ASLDAISVGGEACFRQGM--------GPL--------MAGVERIPPAVSYRGA--------FPDA----------DGSDV 214 (459)
T ss_pred ccHHHHhhcCCcccccCC--------CCC--------CCCCEEeCCCcccccc--------cCCh----------hHHHH
Confidence 999999999876554421 110 1234455555544321 2221 23344
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL 678 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~ 678 (818)
.+.+.+++.+++ .+++||||+||| |++| +++||++||++|+++|++||++||+|||||||||||++|+++++
T Consensus 215 ~~~~~l~~~i~~------~~~vAavIvEPv-~g~g-~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~ 286 (459)
T PRK06082 215 HYADYLEYVIEK------EGGIGAFIAEAV-RNTD-VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAY 286 (459)
T ss_pred HHHHHHHHHHhc------CCCEEEEEECCc-cCCC-CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhh
Confidence 556778888862 358999999998 9985 77889999999999999999999999999999999999999999
Q ss_pred CCCCcEEEecccccCCccccceeecchHHHhhccCC----hH-------------------------------HHHHHHH
Q 003466 679 GCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD----SK-------------------------------LWDLELI 723 (818)
Q Consensus 679 gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~----~~-------------------------------~~~~~l~ 723 (818)
||+|||+|+||+|||||+|+|++++++++++.+... .. ++.+.+.
T Consensus 287 gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~ 366 (459)
T PRK06082 287 GIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLL 366 (459)
T ss_pred CCCCCEEEecccccCCCCcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999988999999999988654210 00 1222333
Q ss_pred HHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 724 QQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 724 ~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
+..++++.+.+|||.|+|+++++..+.....++...+..+...|+++||++.+. ++++++.||+++|++|||+++++++
T Consensus 367 ~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~l~ 446 (459)
T PRK06082 367 EMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILE 446 (459)
T ss_pred HHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHHHH
Confidence 334568899999999999999998653222233345677889999999999885 6999999999999999999999999
Q ss_pred HHHHHHHH
Q 003466 803 QRLEEFDK 810 (818)
Q Consensus 803 ~~l~~l~~ 810 (818)
+++.++.+
T Consensus 447 ~~l~~~~~ 454 (459)
T PRK06082 447 EAIAKICQ 454 (459)
T ss_pred HHHHHHhh
Confidence 99988744
No 31
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-62 Score=561.25 Aligned_cols=372 Identities=19% Similarity=0.237 Sum_probs=296.4
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|+++++++|. ||||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+.......+++..+|+++|++.
T Consensus 36 p~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~ 108 (457)
T PRK05639 36 PLVPKRGFGA--LIEDVDGN----VFIDFLAGAAAASTGYS-HPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEI 108 (457)
T ss_pred CceEEeeecC--EEEeCCCC----EEEECCcCHHhhccCCC-CHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhh
Confidence 6788898886 79999999 99999999999999999 99999999999999876544334578999999999998
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC-CCCC
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS-PYTG 534 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~-~~~~ 534 (818)
+|.+ +++|+|++|||||||+|||+| |+||++ .+||+|+++|||+|.+++++++.. .++.
T Consensus 109 ~p~~-~~~v~f~~SGsEA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~a~s~~~~~~~~~~ 168 (457)
T PRK05639 109 SPIE-NPKVLFGLSGSDAVDMAIKVS-KFSTRR------------------PWILAFIGAYHGQTLGATSVAAFQSSQKR 168 (457)
T ss_pred CCCC-cCEEEEeCchHHHHHHHHHHH-HHhcCC------------------CeEEEECCCcCCccHHHHHHcCCCccccc
Confidence 8754 579999999999999999999 777654 589999999999999999998742 2222
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. | .+. .++..++++|++++++. ..++. .+.+.+...+.+.+++.|... .
T Consensus 169 ~-----~---~~~--------~~~~~~~p~~~~~~~~~------~~~~~-------~~~~~~~~~~~~~le~~l~~~--~ 217 (457)
T PRK05639 169 G-----F---SPL--------MPNVVWIPYPNPYRNPW------GINGY-------EEPDELINRFLDYLENYVFSH--V 217 (457)
T ss_pred C-----C---CCC--------CCCceEeCCCccccccc------ccccc-------CCHHHHHHHHHHHHHHHHHHh--h
Confidence 1 0 110 12344566665543211 01110 112234445567777776421 0
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.+++++||||+||| |++||+++||++||++|+++|++||++||+|||||||||||++|+++++|++|||+||||+||||
T Consensus 218 ~~~~~iAAvI~EPi-qg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG 296 (457)
T PRK05639 218 VPPDEVAALFAEPI-QGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASG 296 (457)
T ss_pred cCCCceEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCC
Confidence 24679999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCCh-------H---------------------------HHHHHHHHHHHcCCCeeEEEeeee
Q 003466 695 VIPLAATLATNAVFDSFVGDS-------K---------------------------LWDLELIQQISSHRTVQRVVALGT 740 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~-------~---------------------------~~~~~l~~~l~~~~~v~~vrg~Gl 740 (818)
+|+|++++++++++.+.... . ++.+.+.+...+++.+.+|||.|+
T Consensus 297 -~pi~av~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl 375 (457)
T PRK05639 297 -MGLSGVIGRKELMDLTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGL 375 (457)
T ss_pred -CcceeEEehHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeecccee
Confidence 69999999999998432110 0 122223333356888999999999
Q ss_pred EEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 741 LCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 741 ~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
|+++++..+. ..++...+..+++.|+++|+++.+. +++|||.||+++|++|||+++++|+++++++.
T Consensus 376 ~~gve~~~~~--~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 376 MIGVEIVKEN--GKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred EEEEEEecCC--CCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 9999997542 1234456778999999999999875 48999999999999999999999999998875
No 32
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.5e-62 Score=558.56 Aligned_cols=343 Identities=21% Similarity=0.251 Sum_probs=278.4
Q ss_pred EEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhcc
Q 003466 377 TVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGV 456 (818)
Q Consensus 377 ~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~ 456 (818)
.++.++.| +|+||.||| +||||.+|+|+.++||+ ||+|++|+++|++++.+.+. ...+++..+|||+|++.+
T Consensus 59 ~~~~~~~g--~~l~D~dG~----~ylD~~~g~~~~~lGh~-hp~v~~Av~~ql~~l~~~~~-~~~~~~~~~lAe~L~~~~ 130 (442)
T TIGR03372 59 VEWQAGGL--NTLIDTQGN----EFIDCLGGFGIFNVGHR-NPNVIAAVENQLAKQPLHSQ-ELLDPLRALLAKTLAALT 130 (442)
T ss_pred eEEEeCCe--eEEEECCCC----EEEECCccHHhhhcCCC-CHHHHHHHHHHHHhCCCccc-ccCCHHHHHHHHHHHHhC
Confidence 34455444 489999999 99999999999999999 99999999999999876542 356899999999999988
Q ss_pred CCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcC
Q 003466 457 GKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFL 536 (818)
Q Consensus 457 ~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~ 536 (818)
|.+ +++|+|+||||||||+|||+| |.|+..+ +|.+||+++++|||+|.+++++|+.+.++..|
T Consensus 131 p~~-~~~v~f~~SGsEA~e~AlklA-r~~t~~~---------------gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 131 PGK-LKYSFFCNSGTESVEAALKLA-KAYQSPR---------------GKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred CCC-cCEEEEeCCchHHHHHHHHHH-HHHHhhc---------------CCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 754 579999999999999999999 7887432 35789999999999999999999865444321
Q ss_pred CCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCC
Q 003466 537 QQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKV 616 (818)
Q Consensus 537 ~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~ 616 (818)
++. . +++.+++ |||. +.+++.++... .+
T Consensus 194 --------~p~--~------~~~~~~p----------------~~d~------------------~~~~~~l~~~~--~~ 221 (442)
T TIGR03372 194 --------MPL--L------PGFHHVA----------------FGDI------------------EAMLKALNECK--KT 221 (442)
T ss_pred --------CCC--C------CCCEEeC----------------CCCH------------------HHHHHHHHHHh--cC
Confidence 110 0 1222333 4442 22233332110 24
Q ss_pred CCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCcc
Q 003466 617 SGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVI 696 (818)
Q Consensus 617 ~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~ 696 (818)
++++||||+||| |++||+++||++||++++++|++||++||+|||||||||||+||+++++||+|||+|+||+|||||+
T Consensus 222 ~~~vAavIvEpv-~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~ 300 (442)
T TIGR03372 222 GDDVAAIILEPI-QGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVM 300 (442)
T ss_pred CCcEEEEEEeCc-cCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhcCCcc
Confidence 678999999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeecchHHHhhccCCh--H-------------------H----------------HHHHHHHHHHcCC-CeeEEEee
Q 003466 697 PLAATLATNAVFDSFVGDS--K-------------------L----------------WDLELIQQISSHR-TVQRVVAL 738 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~~~--~-------------------~----------------~~~~l~~~l~~~~-~v~~vrg~ 738 (818)
|+||+++++++++.+.... . + +.+.+.+...+++ .+.+|||.
T Consensus 301 Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~ 380 (442)
T TIGR03372 301 PIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK 380 (442)
T ss_pred cceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence 9999999999998773211 0 1 1122233334677 68999999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
|+|+++++.++ ..+..+++.|+++||++.+. ++++||.||+++|++|||+++++|++++
T Consensus 381 Gl~~giel~~~--------~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 381 GLLMAIEFRDN--------EIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred eEEEEEEeCCh--------HHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 99999999865 34677899999999999764 4899999999999999999999998864
No 33
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-62 Score=555.36 Aligned_cols=372 Identities=19% Similarity=0.228 Sum_probs=300.4
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+.....+.+++..+|+++|++
T Consensus 24 ~p~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGH~-~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~ 96 (445)
T PRK08593 24 YPLVIDHGYGA--TLTDVDGK----TYIDLLASASSQNVGHA-PPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCE 96 (445)
T ss_pred CCceEEeeeeC--EEEeCCCC----EEEECCccHHhhcCCCC-CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHH
Confidence 36788888886 79999999 99999999999999999 9999999999999988766545679999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC-CC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP-YT 533 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~-~~ 533 (818)
.+|.++.++|+|++|||||||+|||+| |.|++| .+||+++++|||+|.+++++++... ++
T Consensus 97 ~~p~~~~~~v~f~~SGseA~e~AiklA-r~~tgr------------------~~ii~~~~~YHG~t~~als~s~~~~~~~ 157 (445)
T PRK08593 97 LAPGDFEKRVTFGLSGSDANDGIIKFA-RAYTGR------------------PYIISFTNAYHGSTYGSLSMSGISLNMR 157 (445)
T ss_pred hCCCCCCCEEEECCchHHHHHHHHHHH-HHhhCC------------------CeEEEECCCcCCCcHHHHhhcCCCcccc
Confidence 987543469999999999999999999 778654 5899999999999999999997432 22
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
.. .++. .++..+++.|+.+++... .++ ......+.+.+++.++..
T Consensus 158 ~~--------~~~~--------~~~~~~~~~p~~~~~~~~------~~~-----------~~~~~~~~~~~~~~~~~~-- 202 (445)
T PRK08593 158 RK--------YGPL--------LPGFVHIPFPDKYRGMYE------EPD-----------ANFVEEYLAPLKEMFEKY-- 202 (445)
T ss_pred cC--------CCCC--------CCCcEEeCCCcccccccc------CCc-----------HHHHHHHHHHHHHHHHhh--
Confidence 21 0111 123455666765542110 011 122344456677767532
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
..++++||||+||| |++||+++||++||++|+++|++||++||+|||+|||||+|++|+++++|+.|||+|+||+|||
T Consensus 203 -~~~~~iAavI~EPv-~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~ 280 (445)
T PRK08593 203 -LPADEVACIVIETI-QGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAG 280 (445)
T ss_pred -cCCCceEEEEEccc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccC
Confidence 13578999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEee
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVAL 738 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~ 738 (818)
| +|+|++++++++++.+..... ++.+.+.+..++++.+.+|||.
T Consensus 281 G-~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~ 359 (445)
T PRK08593 281 G-MPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGY 359 (445)
T ss_pred C-cccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecc
Confidence 9 799999999999988742211 1112222333568899999999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~ 810 (818)
|+|+++++..+.....++...+..+++.|+++||++.+. ++++||.||++||++|||+++++++++++++.+
T Consensus 360 Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 360 GLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred ceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 999999997643222334456778999999999999874 599999999999999999999999999988753
No 34
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-61 Score=555.31 Aligned_cols=371 Identities=19% Similarity=0.185 Sum_probs=287.7
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|+++..+.....+.+++..+||++|++
T Consensus 40 ~p~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGH~-~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~ 112 (459)
T PRK06931 40 LPLAIAKAQGV--WVTDVEGN----QYLDCLAGAGTLALGHN-HPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLS 112 (459)
T ss_pred CCceEEecccc--EEEeCCCC----EEEEcccchhhccCCCC-CHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHH
Confidence 46788888886 79999999 99999999999999999 9999999999998743222224578999999999999
Q ss_pred ccCCCCC--CcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCC
Q 003466 455 GVGKGWA--SRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPY 532 (818)
Q Consensus 455 ~~~~~~l--~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~ 532 (818)
.+|.... ..+||+||||||||+|||+| |+|++| .+||+|+++|||+|.+++++++...+
T Consensus 113 ~~p~~~~~~~~~f~~~SGsEAve~AlklA-r~~tgr------------------~~Ii~~~~~yHG~t~~als~t~~~~~ 173 (459)
T PRK06931 113 LLPGQGKEYCLQFTGPSGADAVEAAIKLA-KTYTGR------------------SNVISFSGGYHGMTHGALAVTGNLSP 173 (459)
T ss_pred hCCCccccceEEEeCCCcHHHHHHHHHHH-HHhcCC------------------CeEEEECCCcCCccHHHHhhcCCccc
Confidence 8864311 24566699999999999999 788654 58999999999999999999986544
Q ss_pred CCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCC
Q 003466 533 TGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNP 612 (818)
Q Consensus 533 ~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~ 612 (818)
+..+ .+. .++..+++.|+.++++ |+. .. +.....+.+.+++.+.+.
T Consensus 174 ~~~~--------~~~--------~~~~~~~~~~~~~~~~--------~~~-------~~--~~~~~~~~~~~~~~~~~~- 219 (459)
T PRK06931 174 KNAV--------NGL--------MPGVQFMPYPHEYRCP--------LGI-------GG--EAGVKALTYYFENFIEDV- 219 (459)
T ss_pred ccCC--------CCC--------CCCcEEeCCCcccccc--------ccC-------Cc--hhHHHHHHHHHHHHHHhh-
Confidence 4321 000 1234556667665432 221 00 111122233445554321
Q ss_pred CCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEeccccc
Q 003466 613 GLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLT 692 (818)
Q Consensus 613 ~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLg 692 (818)
..+++++||||+||| |++||+++||++||++||++|++||++||+|||||||||||++|+++++||+|||+|+||+||
T Consensus 220 -~~~~~~iAAvI~EPi-qg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~ 297 (459)
T PRK06931 220 -ESGVRKPAAVILEAI-QGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVG 297 (459)
T ss_pred -hcCCCceEEEEEccc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEeccccc
Confidence 024578999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEe
Q 003466 693 GGVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg 737 (818)
|| +|+||+++++++ +.+..... ++.+.+.+..+++|.+.+|||
T Consensus 298 gG-~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG 375 (459)
T PRK06931 298 GG-LPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRG 375 (459)
T ss_pred CC-cceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEec
Confidence 99 799999998874 65532111 122233333367899999999
Q ss_pred eeeEEEEEEecCcccC------CCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 738 LGTLCAIELQAAGCNA------GYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 738 ~Gl~~~iel~~~~~~~------~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.|+|+++++..+.... ..+...+..+.+.|+++||++.+. +++++|.||+++|++|||+++++|+++++++
T Consensus 376 ~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 376 RGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred CceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 9999999997642111 112345677899999999999874 4899999999999999999999999999775
Q ss_pred H
Q 003466 809 D 809 (818)
Q Consensus 809 ~ 809 (818)
-
T Consensus 456 ~ 456 (459)
T PRK06931 456 V 456 (459)
T ss_pred H
Confidence 3
No 35
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-61 Score=553.21 Aligned_cols=367 Identities=24% Similarity=0.267 Sum_probs=289.4
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+..+..+.+++..+|+++|++
T Consensus 38 ~p~~i~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~ 110 (443)
T PRK06058 38 LPVYVARAGGG--IVEDVDGN----RLIDLGSGIAVTSVGNS-APRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNR 110 (443)
T ss_pred CCceEEeeeee--EEEeCCCC----EEEEcCcchhhhccCCC-CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHH
Confidence 36688888886 79999999 99999999999999999 9999999999999987655444568999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC-CC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP-YT 533 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~-~~ 533 (818)
.+|....++++|++|||||||+|||+| |.|+++ .+||+++++|||+|.+++++++... ++
T Consensus 111 ~~p~~~~~~v~f~~sGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~al~~~~~~~~~~ 171 (443)
T PRK06058 111 LTPGDHEKRSALFNSGAEAVENAVKIA-RSYTGR------------------QAVVVFDHAYHGRTNLTMALTAKSMPYK 171 (443)
T ss_pred hCCCCCCCEEEEeCCcHHHHHHHHHHH-HHhhCC------------------CeEEEECCCcCcChHHHHhhcCCCcccc
Confidence 887433469999999999999999999 788654 4899999999999999999987431 22
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
.. .++. + ++..+++.|++++ +.. ....+.+.....+.+.+++.+
T Consensus 172 ~~--------~~~~--~------~~~~~~~~~~~~~------------~~~---~~~~~~~~~~~~~~~~l~~~~----- 215 (443)
T PRK06058 172 SG--------FGPF--A------PEVYRAPMSYPYR------------DPK---GLATDGEEAAARAITVIEKQV----- 215 (443)
T ss_pred cc--------cCCC--C------CCceEcCCCcccc------------ccc---ccccchHHHHHHHHHHHHHhh-----
Confidence 21 1111 0 1223344444332 110 000011122222333444433
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
.++++||||+||+ |++||+++||++||++|+++|++||++||+|||+|||||||++|+++++|++|||+|+||+|||
T Consensus 216 --~~~~iAavi~EPi-~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~ 292 (443)
T PRK06058 216 --GADNLAAVIIEPI-QGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAG 292 (443)
T ss_pred --CCCceEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccC
Confidence 2578999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEee
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVAL 738 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~ 738 (818)
| +|+||+++++++++.+..... ++.+.+.+...+++.+.+|||.
T Consensus 293 G-~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~ 371 (443)
T PRK06058 293 G-LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGR 371 (443)
T ss_pred C-CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeecc
Confidence 9 699999999999987753321 1222333333557889999999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
|+|+++++..+. ...++...+..+.+.|+++||++.+. +++|||.||+++|++|||+++++|+++++++
T Consensus 372 G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 372 GAMIAIELVKPG-TTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred ceEEEEEEecCC-CCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 999999997653 12234456778999999999999874 4899999999999999999999999998653
No 36
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.6e-61 Score=548.69 Aligned_cols=380 Identities=31% Similarity=0.467 Sum_probs=307.7
Q ss_pred chhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhc
Q 003466 353 MPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARF 432 (818)
Q Consensus 353 l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~ 432 (818)
+.++..+++|+|++++... ..|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~ 74 (423)
T PRK05964 4 LMALDLSHVWHPYTQMKLH--PPPIPIVRAEGA--YLYLADGR----ELIDAISSWWVATHGHN-HPYIDQAIREQLDRL 74 (423)
T ss_pred hhhhhhcceecCCCCcccc--CCCeeEEecccc--EEEeCCCC----EEEEcchhHHhccCCCC-CHHHHHHHHHHHhhC
Confidence 4455567899998876432 357888898886 79999999 99999999999999999 999999999999998
Q ss_pred ccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEE
Q 003466 433 GHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLAL 512 (818)
Q Consensus 433 ~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~ 512 (818)
.+..+.++.+++..+|+++|++.+|.+ +++|+|++|||||||+|||+| |.|+..+|. ++|.+||+|
T Consensus 75 ~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~A~kla-r~~~~~~~~------------~~r~~ii~~ 140 (423)
T PRK05964 75 DHVIFAGFTHEPAERLAQRLVALTPGG-LDHVFFSDSGSVAVEVALKMA-LQYWRNRGE------------PGRSRFLSL 140 (423)
T ss_pred CCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCcEEEEE
Confidence 776544567899999999999998744 689999999999999999999 777654443 568899999
Q ss_pred cCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccC
Q 003466 513 KGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERD 592 (818)
Q Consensus 513 ~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~ 592 (818)
+++|||+|.+++++++...++.. +.+ . ..+..++++| +||
T Consensus 141 ~~~yHG~t~~~ls~~~~~~~~~~-----~~~---~--------~~~~~~~~~~--------------~~d---------- 180 (423)
T PRK05964 141 RGGYHGDTIGTMSVGDRGGMHAL-----YTP---L--------LFEQVTAPFP--------------PDG---------- 180 (423)
T ss_pred cCCcCCccHHHHhcCCCcccccc-----ccC---c--------CCCCEEeCCC--------------cch----------
Confidence 99999999999999876543321 110 0 0112333333 222
Q ss_pred chhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc
Q 003466 593 SSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE 672 (818)
Q Consensus 593 ~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~ 672 (818)
....+.+.+++.+. .+++++||||+||++|++||++++|++||++|+++|++||++||+|||||||||+|++
T Consensus 181 ---~~~~~~~~l~~~l~-----~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~ 252 (423)
T PRK05964 181 ---YEQATLDALEALLE-----KHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTL 252 (423)
T ss_pred ---hHHHHHHHHHHHHH-----hCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcch
Confidence 11233577788886 3467999999999559999999999999999999999999999999999999999999
Q ss_pred chhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC---------h----H------------HHH--------
Q 003466 673 TTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD---------S----K------------LWD-------- 719 (818)
Q Consensus 673 ~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~---------~----~------------~~~-------- 719 (818)
|+++++|+.|||+|+||+|+|||+|+|++++++++++.+... . . +++
T Consensus 253 ~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~ 332 (423)
T PRK05964 253 FACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERV 332 (423)
T ss_pred hHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 999999999999999999999999999999999999876421 0 0 111
Q ss_pred ----HHHHHHH---HcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHH
Q 003466 720 ----LELIQQI---SSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPE 792 (818)
Q Consensus 720 ----~~l~~~l---~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~e 792 (818)
+.+.+.+ ..++.+.++||.|+|+++++..+.. ...+..+.+.|+++||++.+.++++||+||+++|++
T Consensus 333 ~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~-----~~~~~~l~~~l~~~Gv~v~~~~~~lR~~p~l~~t~e 407 (423)
T PRK05964 333 AALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL-----ERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAE 407 (423)
T ss_pred HHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc-----hhHHHHHHHHHHHCCeEEEecCCEEEEeCCcccCHH
Confidence 1222222 3467788999999999999975420 124667899999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 003466 793 VCSQLLLKLYQRLEEF 808 (818)
Q Consensus 793 dId~~~~~l~~~l~~l 808 (818)
|||+++++|+++++++
T Consensus 408 dId~~v~~l~~al~~~ 423 (423)
T PRK05964 408 ELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999999764
No 37
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=1.6e-60 Score=544.45 Aligned_cols=370 Identities=19% Similarity=0.214 Sum_probs=286.8
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++.+.......++...+||++|++
T Consensus 21 ~p~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~ 93 (442)
T TIGR00709 21 LPTAFAKAQGC--WVTDVEGK----EYLDFLAGAGTLALGHN-HPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLN 93 (442)
T ss_pred CCceEEecccc--EEEeCCCC----EEEEccccHhhhcCCCC-CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHH
Confidence 36688888886 79999999 99999999999999999 9999999999999866544334568999999999999
Q ss_pred ccCCC--CCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCC
Q 003466 455 GVGKG--WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPY 532 (818)
Q Consensus 455 ~~~~~--~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~ 532 (818)
++|.+ ....+||+||||||||+|||+| |.||+| .+||+++++|||.|.+++++++...+
T Consensus 94 ~~p~~~~~~~~~f~~~sGsEA~e~AlklA-r~~tgr------------------~~Ii~~~~~yHG~t~~~~s~t~~~~~ 154 (442)
T TIGR00709 94 IIPKRKMDYKLQFPGPSGADAVEAAIKLA-KTYTGR------------------TNVISFSGGFHGMTIGALAVTGNLFA 154 (442)
T ss_pred hCCCcCCCccEEEeCCCHHHHHHHHHHHH-HHhcCC------------------CeEEEEcCCcCCchHHHHhhcCChhh
Confidence 88642 1234566799999999999999 788654 58999999999999999999985544
Q ss_pred CCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCC
Q 003466 533 TGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNP 612 (818)
Q Consensus 533 ~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~ 612 (818)
+..+ .+. . +++.+++.|+.++++ ||. . .+.....+.+.+++.++...
T Consensus 155 ~~~~--------~~~--~------~~~~~~~~~~~~~~~--------~~~-------~--~~~~~~~~~~~~~~~~~~~~ 201 (442)
T TIGR00709 155 KNAV--------GML--M------PGVQFMPYPHEYRCP--------FGI-------G--GEAGSNASIEYFENFIEDVE 201 (442)
T ss_pred hccC--------CCC--C------CCcEEeCCCcccccc--------ccC-------C--chhHHHHHHHHHHHHHHhhc
Confidence 3321 111 0 123344555544321 221 0 01111222334455553210
Q ss_pred CCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEeccccc
Q 003466 613 GLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLT 692 (818)
Q Consensus 613 ~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLg 692 (818)
...+++||||+||+ |+++|+++||++||++|+++|++||++||+|||+|||||||++|+++++|++|||+|+||+||
T Consensus 202 --~~~~~iaavi~Epi-~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~ 278 (442)
T TIGR00709 202 --SGVDKPAAVILEAI-QGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVG 278 (442)
T ss_pred --cCCCceEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEccccc
Confidence 24578999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEe
Q 003466 693 GGVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg 737 (818)
|| +|+|+++++++ ++.+..... ++.+.+.+..++++.+.+|||
T Consensus 279 ~G-~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG 356 (442)
T TIGR00709 279 GG-LPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRG 356 (442)
T ss_pred CC-cccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec
Confidence 99 79999999988 455432111 111223333357899999999
Q ss_pred eeeEEEEEEecCcccC------CCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 738 LGTLCAIELQAAGCNA------GYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 738 ~Gl~~~iel~~~~~~~------~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.|+|++++|..+.... ..+...+..+...|+++||++.+. +++|+|.||+++|++|||++++++++++.++
T Consensus 357 ~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 357 RGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred cceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999997652111 112345778899999999999874 6899999999999999999999999999876
No 38
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-60 Score=541.07 Aligned_cols=369 Identities=21% Similarity=0.265 Sum_probs=294.4
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +|||+++|+|+.++||+ ||+|++|+++|++++.+.....+.+++..+||++|++
T Consensus 36 ~p~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~ 108 (441)
T PRK05769 36 YPLVIERGEGV--WVEDVDGN----VYLDFNAGIAVTNVGHA-HPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVE 108 (441)
T ss_pred CCeeEEecceE--EEEeCCCC----EEEECCCchhhcccCCC-CHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHH
Confidence 46788888775 79999999 99999999999999999 9999999999999988765545678999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC-CCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS-PYT 533 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~-~~~ 533 (818)
.+|.+++++|+|++|||||||+|||+| |+|+++ .+||+++++|||+|.+++++++.. .++
T Consensus 109 ~~p~~~~~~v~f~~SGsEA~e~AlklA-r~~tgr------------------~~Ii~~~~~yHG~t~~~ls~t~~~~~~~ 169 (441)
T PRK05769 109 IAPGGFEKKVFFTNSGTESNEAAIKIA-RYHTGR------------------KYIIAFLGAFHGRTYGSLSLTASKPVQR 169 (441)
T ss_pred hCCCCCCCEEEECCchHHHHHHHHHHH-HHHhCC------------------CeEEEECCCcCCccHHHHHhcCCCcccc
Confidence 887544689999999999999999999 778654 589999999999999999998643 222
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHH-HHhcCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQ-NLLQNP 612 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~-~L~~~~ 612 (818)
.. |.+ . .++..+++.|+.++.+ ||+ .+.++....+.+.+++ +++..
T Consensus 170 ~~-----~~~---~--------~~~~~~~~~~~~~~~~--------~~~--------~~~~~~~~~~~~~le~~~~~~~- 216 (441)
T PRK05769 170 KG-----FFP---L--------MPGVIHVPYPNPYRNP--------WGI--------ENPEECGNAVLDFIEDYLFKKL- 216 (441)
T ss_pred cC-----CCC---C--------CCCeEEeCCCcccccc--------ccC--------CchHHHHHHHHHHHHHHHHhhc-
Confidence 21 110 0 1234456666554321 221 0112233344566777 33311
Q ss_pred CCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEeccccc
Q 003466 613 GLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLT 692 (818)
Q Consensus 613 ~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLg 692 (818)
.+++++||||+||| |+++|+++||++||++|+++|++||++||+|||+|||||+|++|+++++|+.||++|+||++|
T Consensus 217 --~~~~~iaavi~Epv-~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~ 293 (441)
T PRK05769 217 --VPPEEVAAIIVEPI-QGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIA 293 (441)
T ss_pred --cCCCceEEEEECcc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEccccc
Confidence 24678999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceeecchHHHhhccCC-hH-----------------HHH---------------HHHHHHHHcCCCeeEEEeee
Q 003466 693 GGVIPLAATLATNAVFDSFVGD-SK-----------------LWD---------------LELIQQISSHRTVQRVVALG 739 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~l~~~-~~-----------------~~~---------------~~l~~~l~~~~~v~~vrg~G 739 (818)
|| +|+|++++++++++.+... .. +++ +.+.+...+++.+.+|||.|
T Consensus 294 ~G-~p~gav~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 372 (441)
T PRK05769 294 GG-LPLGAVIGRAELMFLPPGSHANTFGGNPVAAAAALATLEELEEGLLENAQKLGEYLRKELKELKEKYEFIGDVRGLG 372 (441)
T ss_pred CC-cccEEEEEehhhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecce
Confidence 99 7999999999998754311 00 111 12222234578899999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+|+++++..+. ..++...+..+.+.|+++||++.+.+ +++||+||++||++|||++++++++++.++
T Consensus 373 ~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 373 LMIGVELVKDR--KEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EEEEEEeccCC--ccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999997652 22234567788999999999998866 899999999999999999999999998753
No 39
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-60 Score=537.19 Aligned_cols=362 Identities=22% Similarity=0.259 Sum_probs=292.9
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+.....+.++...+|+++|++.
T Consensus 23 p~~i~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~ 95 (425)
T PRK07495 23 QIYADRAENA--EIWDKEGR----RYIDFAAGIAVVNTGHR-HPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNAL 95 (425)
T ss_pred CeeEEeeeec--EEEeCCCC----EEEEccccHHhhccCCC-CHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHh
Confidence 6788888886 79999999 99999999999999999 99999999999999877654456789999999999998
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC-CCCC
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS-PYTG 534 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~-~~~~ 534 (818)
+|.++.++|+|++|||||||+|||+| |.|+++ .+||+|+++|||+|.+++++++.. .++.
T Consensus 96 ~p~~~~~~v~f~~SGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 156 (425)
T PRK07495 96 VPGDFAKKTIFVTTGAEAVENAVKIA-RAATGR------------------SAVIAFGGGFHGRTFMGMSLTGKVVPYKV 156 (425)
T ss_pred CCCCCCCEEEECCchHHHHHHHHHHH-HHhhCC------------------CeEEEECCCcCCccHHHhhhcCCCccccc
Confidence 87543479999999999999999999 777654 489999999999999999998742 2222
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. .++. .++..++++|+.+++ . . ...+.+.+++.++..
T Consensus 157 ~--------~~~~--------~~~~~~~~~~~~~~g--------------------~---~-~~~~~~~l~~~~~~~--- 193 (425)
T PRK07495 157 G--------FGAM--------MPDVYHVPFPVELHG--------------------V---S-VEQSLAALDKLFKAD--- 193 (425)
T ss_pred C--------CCCC--------CCCeEEecCCccccc--------------------c---c-HHHHHHHHHHHHHhc---
Confidence 1 1111 123445555543210 0 0 112345667777521
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.+++++||||+||+ |+++|++++|++|+++|+++|++||++||+|||+|||||+|++|+++++|++|||+||||+||||
T Consensus 194 ~~~~~iaavi~EPv-~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G 272 (425)
T PRK07495 194 VDPQRVAAIIIEPV-QGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGG 272 (425)
T ss_pred cCCCceEEEEECCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcCC
Confidence 24578999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... ++.+++.+..+++|.+.+|||.|
T Consensus 273 -~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 351 (425)
T PRK07495 273 -FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPG 351 (425)
T ss_pred -ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCc
Confidence 699999999999987754211 11122333335578899999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+|+++++.++.. ..++...+..+.+.|+++|+++.+. ++++||.||+++|++|||+++++|+++++++.
T Consensus 352 l~~~iel~~~~~-~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 352 FMNAVEFNDADS-GLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred eEEEEEEecCCC-CCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 999999976432 2234455778899999999999764 48999999999999999999999999998765
No 40
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-60 Score=508.20 Aligned_cols=348 Identities=30% Similarity=0.421 Sum_probs=280.1
Q ss_pred CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHH
Q 003466 374 EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 374 ~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
..|.++++++|. .+||.+|+ +||||+|+||+..+||+ ||+|.+|+.+|+.+++|+++..++.+ +.+|+++|.
T Consensus 37 ~~pv~~~~gkg~--kl~D~~g~----EyiD~~ssw~~~~~Gha-npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~ 108 (433)
T KOG1401|consen 37 RYPVVIESGKGS--KLFDPDGK----EYIDFTSSWAVTILGHA-NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLS 108 (433)
T ss_pred CCceeeecceee--eeecCCcc----eeeeeccceeccccCCC-CHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHH
Confidence 466788888775 79999999 99999999999999999 99999999999999999986555555 999999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
+.++.++.++|||+|||+||||+|||+| |.++...- ...+.+||+|+|||||+|+++|++++.+.|+
T Consensus 109 ~~~~~~~~~rvff~nsGTeAne~ALK~A-rk~~~~~~------------~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~ 175 (433)
T KOG1401|consen 109 AVLGKGSAERVFFCNSGTEANETALKFA-RKFTGKKH------------PEKKTKFIAFENSYHGRTLGALSVTGNSKYG 175 (433)
T ss_pred hcccCCCccEEEEecCCcHHHHHHHHHH-HHhhcccC------------CccceeEEEEecCcCCcchhHHHhhcccccC
Confidence 9998878899999999999999999999 66654321 1334689999999999999999999877665
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
-+ +++- .|+-. +.+|||+ .++++.++
T Consensus 176 ~~------------~~p~------------~p~v~--------~~~ynd~------------------t~l~k~~~---- 201 (433)
T KOG1401|consen 176 LP------------FDPI------------APDVV--------TAEYNDS------------------TALEKLFE---- 201 (433)
T ss_pred CC------------CCCC------------CCcee--------ecccCCH------------------HHHHHHHH----
Confidence 53 1110 11111 1336764 67888887
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
.+.++|||||+||| ||+||+++++++|+..||.+|+++|++||+|||||||||+|..|++++++++|||.|+||.|||
T Consensus 202 -~h~~~IaAVIvEPi-qGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~g 279 (433)
T KOG1401|consen 202 -SHKGEIAAVIVEPI-QGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGG 279 (433)
T ss_pred -hCCCceEEEEEecc-cCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccC
Confidence 56788999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCChH--------------------------------------HHHHHHHHHHHcCCC-eeE
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK--------------------------------------LWDLELIQQISSHRT-VQR 734 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~--------------------------------------~~~~~l~~~l~~~~~-v~~ 734 (818)
| +|+||++++++|++.+..+.+ .+++.+.+.+.+.+. +..
T Consensus 280 G-lPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g 358 (433)
T KOG1401|consen 280 G-LPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICG 358 (433)
T ss_pred C-ceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceee
Confidence 9 899999999999998876543 122333444455555 344
Q ss_pred EEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-----CEEEEEC--CCCC--hHHHHHHHHHHHHHHH
Q 003466 735 VVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-----NVIYLMC--GPCS--SPEVCSQLLLKLYQRL 805 (818)
Q Consensus 735 vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-----~~ir~~p--pl~~--t~edId~~~~~l~~~l 805 (818)
.+|+|+++++++..+ ...+....+++|.+..+.+ ..+|+.| ++++ |+|.++++++++++.+
T Consensus 359 ~~grgl~ig~~~~~p----------~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l 428 (433)
T KOG1401|consen 359 GVGRGLVIGFEFEGP----------VYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVL 428 (433)
T ss_pred eeeeEEEEEEEEeec----------hhhhhhhhhhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHHHHHHH
Confidence 499999999999765 2233444444444443321 3466777 4444 4899999999999998
Q ss_pred HHHH
Q 003466 806 EEFD 809 (818)
Q Consensus 806 ~~l~ 809 (818)
.++.
T Consensus 429 ~~~~ 432 (433)
T KOG1401|consen 429 SALN 432 (433)
T ss_pred HHhc
Confidence 8763
No 41
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-60 Score=492.87 Aligned_cols=348 Identities=22% Similarity=0.297 Sum_probs=288.6
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|.++.+++|. ++||.+|+ +|+||.|++.+++.||| ||.|++|+++|++++...+. .+.+....++++.+..+
T Consensus 42 pvvf~ka~g~--~vwD~eGk----~ylDflsaysaVnqGhc-hpki~~aLqeq~~kLtlssr-afYnd~~~~f~~~vt~l 113 (427)
T KOG1402|consen 42 PVVFSKAKGS--RVWDPEGK----EYLDFLSAYSAVNQGHC-HPKIIKALQEQADKLTLSSR-AFYNDVLGEFAEYVTKL 113 (427)
T ss_pred ceEEEecCCc--EEECCCcc----chhhhhhhhhhcccCCC-CHHHHHHHHHHHhHhhhhhH-HHhhhhHHHHHHHHHHh
Confidence 5678888886 79999999 99999999999999999 99999999999999875542 35688999999999999
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCc
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGF 535 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~ 535 (818)
+| .++|+-.|||.||+|+|+|+||++.+..++- +..+.+|++-.++|||+|++++++++.+....
T Consensus 114 f~---~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~i-----------p~nka~il~~~~nFhGrT~~ais~s~d~ds~~- 178 (427)
T KOG1402|consen 114 FG---YDKVLPMNTGAEAVETACKLARKWGYRKKNI-----------PKNKAKILSAENNFHGRTLGAISLSTDPDSWD- 178 (427)
T ss_pred cC---cceeeecccchhHHHHHHHHHHHHHHhhccC-----------CccceeEEEecccccCceeeeEEecCCcchhh-
Confidence 98 5899999999999999999994444444332 13678999999999999999999997652222
Q ss_pred CCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCC
Q 003466 536 LQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLK 615 (818)
Q Consensus 536 ~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~ 615 (818)
++|+++ |.+ +.. ++|||. ++|+..|+
T Consensus 179 -------~fgp~~--P~~-----~~~----------------v~Y~d~------------------eale~~l~------ 204 (427)
T KOG1402|consen 179 -------GFGPFL--PGV-----VDK----------------VPYGDA------------------EALEVALK------ 204 (427)
T ss_pred -------ccCCCC--CCc-----cee----------------eccCCH------------------HHHHHHhc------
Confidence 223322 211 111 337774 67888886
Q ss_pred CCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCc
Q 003466 616 VSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGV 695 (818)
Q Consensus 616 ~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy 695 (818)
..++||+|+||| ||++|+++||++||+++|+||++|+++||+||||||+||||+++++++.+|+|||++|||+|+||+
T Consensus 205 -~~~vaaFivEPI-QGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~ 282 (427)
T KOG1402|consen 205 -SPNVAAFIVEPI-QGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGV 282 (427)
T ss_pred -CCCeeEEEeecc-ccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCe
Confidence 478999999998 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeecchHHHhhccCChH--------------------HHHHH-----------HHHHHH----cCCC-eeEEEeee
Q 003466 696 IPLAATLATNAVFDSFVGDSK--------------------LWDLE-----------LIQQIS----SHRT-VQRVVALG 739 (818)
Q Consensus 696 ~PlsAvl~~~~i~~~l~~~~~--------------------~~~~~-----------l~~~l~----~~~~-v~~vrg~G 739 (818)
+|+|||++++++|-.+.++.+ +.++. ++.+|. ++|. +.+|||+|
T Consensus 283 ~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrG 362 (427)
T KOG1402|consen 283 YPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRG 362 (427)
T ss_pred eeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccc
Confidence 999999999999998876654 11111 233333 3443 68999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee-cCCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP-LGNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p-~g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
++.+|++...+. ....++.+|-.|.++|++..| .++.|||.||++|+++|+++.++++.+++.
T Consensus 363 l~~ai~i~~~~~----~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 363 LLNAIVINPSKT----SGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred eEEEEEeccccc----cchhHHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 999999985531 114578889999999999998 469999999999999999999999988763
No 42
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-59 Score=576.95 Aligned_cols=366 Identities=19% Similarity=0.185 Sum_probs=294.6
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ||||.||| +||||++|+ .++||+ ||+|++|+++|++++.... .+.++...+||++|++
T Consensus 606 ~p~~i~~g~G~--~l~D~dG~----~ylD~~~g~--~~lGH~-hp~v~~Ai~~q~~~l~~~~--~~~~~~~~~lAe~L~~ 674 (1013)
T PRK06148 606 DPIKFVRGWGV--WLIDNRGR----AYLDCFNNV--CHVGHA-HPRVVAAAARQAARLNTNT--RYLHDAIVAYAERLTA 674 (1013)
T ss_pred CCceEEEeeec--EEEECCCC----EEEEcccCh--hhcCCC-CHHHHHHHHHHHhhcCCcC--CcCCHHHHHHHHHHHH
Confidence 46788898886 79999999 999999984 789999 9999999999999974322 4678999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.+|.+ +++|+|+||||||||+|||+| |.||++ .+||+|+++|||+|.+++++++.. ++.
T Consensus 675 ~~p~~-~~~v~f~nSGsEA~e~AlklA-r~~tGr------------------~~ii~~~~~YHG~t~~a~s~s~~~-~~~ 733 (1013)
T PRK06148 675 TLPDG-LTVAFFVNSGSEANSLALRLA-RAHTGQ------------------RDAIVLDHAYHGTTTELIDLSPYK-FNR 733 (1013)
T ss_pred hCCCC-cCEEEEeCCcHHHHHHHHHHH-HHhcCC------------------CeEEEEcCCccCCCcchhhcCchh-hcc
Confidence 98754 689999999999999999999 888764 489999999999999999998743 222
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
+ +.. . ..+.+.+++.|++++. +||+. ..+....|.+.+++.++...
T Consensus 734 ~----~~~----~-------~~~~~~~~~~p~~~~~--------~~~~~---------~~~~~~~~~~~l~~~i~~~~-- 779 (1013)
T PRK06148 734 K----GGK----G-------RPDHVEVAEVPDSYRG--------PERWP---------DAEHGRRFAESVAEQIAAMA-- 779 (1013)
T ss_pred c----CCC----C-------CCCCceEcCCCCcccc--------CCCCC---------hhhhHHHHHHHHHHHHHhhh--
Confidence 1 110 0 0122345556665542 24421 01223344566666664211
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc-cchhcccCCCCcEEEecccccC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-ETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~~a~e~~gv~PDivtlgKgLgg 693 (818)
.+++++||||+||| ||+||+++||++||++|+++|++||++||+|||||||||||+ ||+++++||+|||+|+||+|||
T Consensus 780 ~~~~~iAAvI~EPv-~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lgg 858 (1013)
T PRK06148 780 AKGRGPAFFIAESI-PSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGN 858 (1013)
T ss_pred ccCCceEEEEEcCC-cCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccC
Confidence 34578999999998 999999999999999999999999999999999999999997 8999999999999999999999
Q ss_pred CccccceeecchHHHhhccCCh-H-----------------------------------HHHHHHHHHHHcCCCeeEEEe
Q 003466 694 GVIPLAATLATNAVFDSFVGDS-K-----------------------------------LWDLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~-~-----------------------------------~~~~~l~~~l~~~~~v~~vrg 737 (818)
| +|+||+++++++++.+..+. . ++.+.+.+..++++.+++|||
T Consensus 859 G-~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG 937 (1013)
T PRK06148 859 G-HPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRG 937 (1013)
T ss_pred C-cceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEee
Confidence 9 69999999999999875431 1 222334444467899999999
Q ss_pred eeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC---CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 738 LGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG---NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 738 ~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g---~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.|+|+++++..+.....++...+..+.+.|+++||++.+.| +++||.||+++|++|||+++++|+++++++
T Consensus 938 ~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 938 MGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred eceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999986543333444567789999999999998744 899999999999999999999999999765
No 43
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=6.9e-59 Score=528.56 Aligned_cols=380 Identities=28% Similarity=0.457 Sum_probs=299.9
Q ss_pred chhhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhc
Q 003466 353 MPKRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARF 432 (818)
Q Consensus 353 l~~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~ 432 (818)
|.+.+..++|+||+.... ...+..+++++|. ++||.||+ +||||++|+|+.++||+ ||+|++|+++|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~G~--~l~d~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~~~~~~ 77 (427)
T TIGR00508 7 LLAFDQRHIWHPYTSMSS--PLPVYPVESADGV--ELTLDDGR----RLIDGMSSWWAAIHGYN-HPRLNAAAQKQIDKM 77 (427)
T ss_pred HHhccccccccCccCccc--cCCCceEEeeeee--EEEeCCCC----EEEEccchHHHhcCCCC-CHHHHHHHHHHHHhc
Confidence 445556678988876521 1234567787775 79999999 99999999999999999 999999999999998
Q ss_pred ccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEE
Q 003466 433 GHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLAL 512 (818)
Q Consensus 433 ~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~ 512 (818)
++..+...+++...+|+++|++.+|.+ +++|+|++||+||||.|+|+| |.|++.+|. ++|.+||+|
T Consensus 78 ~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~v~f~~sGseA~e~AlklA-r~~~~~~~~------------~~r~~il~~ 143 (427)
T TIGR00508 78 SHVMFGGFTHKPAIELCQKLVKMTPNA-LDCVFLADSGSVAVEVALKMA-LQYWQAKGE------------KNRQKFLTI 143 (427)
T ss_pred CCccccccCCHHHHHHHHHHHhhCCCC-CCEEEEeCCcHHHHHHHHHHH-HHHHHhhCC------------CCccEEEEE
Confidence 876655567899999999999998755 689999999999999999999 677654443 567899999
Q ss_pred cCCCCCCccccccccCCCC-CCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhccc
Q 003466 513 KGSYHGDTLGAMEAQAPSP-YTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEER 591 (818)
Q Consensus 513 ~~sYHG~t~~als~tg~~~-~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~ 591 (818)
+++|||.|.+++++++... ++.. +.+ . .++..+++.|... |..
T Consensus 144 ~~~yHG~t~~~~s~~~~~~~~~~~-----~~~---~--------~~~~~~~~~p~~~-----------~~~--------- 187 (427)
T TIGR00508 144 RSGYHGDTFGAMSVCDPENSMHSL-----YKG---Y--------LPEQIFAPAPQNR-----------FDE--------- 187 (427)
T ss_pred cCCcCCccHhhhcccCCccccccc-----ccc---c--------CCCCeEcCCCCcc-----------ccc---------
Confidence 9999999999999987532 2211 110 0 0111223333211 100
Q ss_pred CchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc
Q 003466 592 DSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV 671 (818)
Q Consensus 592 ~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~ 671 (818)
.....+.+.+++.++. .++++||||+|||+|++||+++++++||++|+++|++||++||+|||||||||+|+
T Consensus 188 ---~~~~~~~~~l~~~l~~-----~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~ 259 (427)
T TIGR00508 188 ---EWNEEAITPLAKLMEL-----HSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK 259 (427)
T ss_pred ---hhHHHHHHHHHHHHHh-----cCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc
Confidence 0011123566777763 35689999999976999999999999999999999999999999999999999999
Q ss_pred cchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC-------h------H-----------HH---------
Q 003466 672 ETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-------S------K-----------LW--------- 718 (818)
Q Consensus 672 ~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-------~------~-----------~~--------- 718 (818)
+|+++++|+.|||+|+||+|+|||+|++++++++++++.+... . . ++
T Consensus 260 ~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~ 339 (427)
T TIGR00508 260 LFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQV 339 (427)
T ss_pred cchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999998877531 0 0 11
Q ss_pred ---HHHHHHH---HHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHH
Q 003466 719 ---DLELIQQ---ISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPE 792 (818)
Q Consensus 719 ---~~~l~~~---l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~e 792 (818)
.+.+.+. +..++.+.++||.|+++++++..+ ..+..+.++|+++||++.+.++++|+.||+++|++
T Consensus 340 ~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~--------~~~~~~~~~l~~~Gv~~~~~~~~l~~~ppl~~t~~ 411 (427)
T TIGR00508 340 SAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP--------VNVEELQKKFVEQGVWIRPFGKLIYVMPPYIITTE 411 (427)
T ss_pred HHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc--------cCHHHHHHHHHHCCeEEEecCCEEEEECCCCCCHH
Confidence 1122222 344566789999999999999643 12467889999999999988899999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 003466 793 VCSQLLLKLYQRLEE 807 (818)
Q Consensus 793 dId~~~~~l~~~l~~ 807 (818)
|||++++++++++++
T Consensus 412 ~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 412 QLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999864
No 44
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-58 Score=525.46 Aligned_cols=369 Identities=21% Similarity=0.237 Sum_probs=296.1
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+.......+++..+||++|++
T Consensus 23 ~p~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~ 95 (443)
T PRK08360 23 YPLVPVKAENA--KVWDIEGN----EYIDFLSDAAVQNVGHN-NPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIE 95 (443)
T ss_pred CCceEEeccee--EEEECCCC----EEEEccccHhhcccCCC-CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHH
Confidence 36788888876 79999999 99999999999999999 9999999999999988766544568999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC-CCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS-PYT 533 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~-~~~ 533 (818)
.+|.+ +++|+|++|||||||+|||+| |.||+| .+||++.++|||+|.+++++++.. .++
T Consensus 96 ~~p~~-~~~v~f~~sGsEAve~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 155 (443)
T PRK08360 96 IAPGD-NPKVSFGLSGSDANDGAIKFA-RAYTKR------------------RKILSYLRSYYGSTYGAMSLTGLDFPVR 155 (443)
T ss_pred hCCCC-CCEEEEcCCHHHHHHHHHHHH-HHhcCC------------------CeEEEEeCCcCCcCHHHHHhcCCCcccc
Confidence 98754 579999999999999999999 788654 589999999999999999998742 122
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
.. .++ + ++..+++.|+.++.. +.+ ....+...+.+.+++.++..
T Consensus 156 ~~--------~~~---~------~~~~~~~~~~~~~~~--------~~~---------~~~~~~~~~~~~~~~~l~~~-- 199 (443)
T PRK08360 156 AL--------VGE---L------SDVHYIPYPDCYRCP--------FGK---------EPGSCKMECVEYIKEKFEGE-- 199 (443)
T ss_pred cC--------CCC---C------CCcEEEeCCcccccc--------ccC---------chhhhHHHHHHHHHHHHHhc--
Confidence 21 111 1 233455556544311 100 00122223445677777531
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
.+++++||||+||+ |+.+|++++|++|+++|+++|++||++||+|||+|||||+|++|+++++|+.||++|+||++++
T Consensus 200 -~~~~~iAAvi~eP~-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~ 277 (443)
T PRK08360 200 -VYAEGVAALFAEPI-QGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGG 277 (443)
T ss_pred -cCCCCeEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccC
Confidence 23578999999997 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEee
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVAL 738 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~ 738 (818)
| +|+|++++++++++.+..... ++.+.+.+...+++.+.+|||.
T Consensus 278 G-~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~ 356 (443)
T PRK08360 278 G-LPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGI 356 (443)
T ss_pred C-ceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecc
Confidence 9 799999999999987753211 1111222223457889999999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee-cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP-LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p-~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
|+|++++|..+.....++...+..+.+.|+++|+++.+ .++++||.||+++|++|||+++++|++++++++
T Consensus 357 Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 357 GLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred ceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999865322333444567889999999999986 469999999999999999999999999999875
No 45
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-58 Score=525.49 Aligned_cols=367 Identities=24% Similarity=0.292 Sum_probs=292.3
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|+++++++|. ++||.||| +||||+||+|+.++||+ ||+|++|+++|++++.+.+.....++++.+|+++|+++
T Consensus 26 ~~~~~~~~G~--~l~d~dG~----~ylD~~~g~~~~~lGh~-~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~ 98 (433)
T PRK08117 26 NLPVVKGEGC--YYYGVDGK----EYLDFTSGIAVANVGHR-HPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEI 98 (433)
T ss_pred CceEEeeeee--EEEeCCCC----EEEECCcchhhccCCCC-CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHh
Confidence 3688888886 79999999 99999999999999999 99999999999999887654446789999999999999
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCC-CCCCC
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAP-SPYTG 534 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~-~~~~~ 534 (818)
+|++ .++|+|+||||||||+|||+| |.|+++ .+||+++++|||+|.+++++++. ..++.
T Consensus 99 ~~~~-~~~v~f~~SGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 158 (433)
T PRK08117 99 TPGG-LDCFFFSNSGAEAIEGALKLA-KHVTKR------------------PYIISFTGCFHGRTLGALSVTTSKSKYRK 158 (433)
T ss_pred CCCC-CCEEEEeCcHHHHHHHHHHHH-HHhcCC------------------CeEEEECCCcCCcCHHHHhhcCCCccccc
Confidence 8644 689999999999999999999 777654 58999999999999999998864 22222
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
.+ .| ..+++.+++.|++++++.. .+.......+.+.+++.+++.
T Consensus 159 ~~-~~---------------~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~--- 202 (433)
T PRK08117 159 YY-QP---------------LLGSVYQAPYPYCDRCPKG-----------------EDPEVCFLECLRDLESLFKHQ--- 202 (433)
T ss_pred cC-CC---------------CCCCcEEeCCCcccccccc-----------------CchhHHHHHHHHHHHHHHHhc---
Confidence 10 00 0123455666655432100 000112223346677777631
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
..++++||||+||| |+++|+++||++|+++|+++|++||++||+|||||||||+|++|+++++|+.|||+|+||+||||
T Consensus 203 ~~~~~~aavi~Epi-~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G 281 (433)
T PRK08117 203 VTPEEVAAVIIEPV-LGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASG 281 (433)
T ss_pred cCCCcEEEEEECCe-eCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCC
Confidence 23578999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HH----------------HHHHHHHHHcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LW----------------DLELIQQISSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~----------------~~~l~~~l~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... .+ .+.+.+...+++.+.++||.|
T Consensus 282 -~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 360 (433)
T PRK08117 282 -LPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIG 360 (433)
T ss_pred -CcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCC
Confidence 799999999999987643211 11 111222224577788999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+|+++++..+. ..++...+..+.+.|+++||++.+. ++++|+.||+++|++||++++++|+++++++.
T Consensus 361 l~~gi~~~~~~--~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 361 LMIGIEIVDPD--GEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred cEEEEEEecCC--CCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999997652 2233345677889999999999764 38999999999999999999999999997763
No 46
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=8.9e-58 Score=523.46 Aligned_cols=369 Identities=21% Similarity=0.287 Sum_probs=292.0
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|+++++++|. |+||.||| +||||.+|+|+.++||+ ||+|.+|+++|++++.+..+..+.+++..+||++|+++
T Consensus 37 ~~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~ 109 (451)
T PRK06918 37 PTFAQSANGA--LVTDVDGN----QYIDFAGAIGTINVGHS-HPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAAL 109 (451)
T ss_pred CceEEecccc--EEEeCCCC----EEEEcCCchhhcCCCCC-CHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHh
Confidence 5688888886 79999999 99999999999999999 99999999999999877654446789999999999999
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC-CCCC
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS-PYTG 534 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~-~~~~ 534 (818)
+|.++.++|+|++|||||||+|||+| |.|++| .+||+|+++|||+|.+++++++.. .++.
T Consensus 110 ~p~~~~~~v~f~~sGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 170 (451)
T PRK06918 110 APGSFDKKVLFLNSGAEAVENAVKIA-RKYTKR------------------QGIISFSRGFHGRTLMTMTMTSKVKPYKF 170 (451)
T ss_pred CCCCCCCEEEEcCCcHHHHHHHHHHH-HHHhCC------------------CcEEEECCCcCccchhhhhhcCCCccccc
Confidence 87543369999999999999999999 888754 589999999999999999998742 2322
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. +++. .+++.+++.|++++++. . .........+.+.+++.+...
T Consensus 171 ~--------~~~~--------~~~~~~~~~~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~--- 214 (451)
T PRK06918 171 G--------FGPF--------APEVYKAPFPYEYRRPE--------G---------LTEEQYDDFMIEEFKNFFISE--- 214 (451)
T ss_pred c--------CCCC--------CCCcEEcCCCccccccc--------c---------CchHHHHHHHHHHHHHHHHhh---
Confidence 1 1111 12334555565443210 0 001122233344555555321
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.+++++||||+||| |++||+++||++|+++|+++|++||++||+|||+|||||+|++|+++++++.||+++|||+|++|
T Consensus 215 ~~~~~iAavi~EPi-~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G 293 (451)
T PRK06918 215 VAPETIAAVVMEPV-QGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAG 293 (451)
T ss_pred cCCCceEEEEECcc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCC
Confidence 24678999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... .+.+.+.+..++++.+.+|||.|
T Consensus 294 -~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G 372 (451)
T PRK06918 294 -VPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLG 372 (451)
T ss_pred -CccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccce
Confidence 799999999999987743211 11112222224577789999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC---CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG---NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g---~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+|+++++..+.....++...+..+.+.|+++||++.+.+ +.+||.||+++|+++|++++++|+++++++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 373 AMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred eEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 999999974321122344567788999999999999853 899999999999999999999999999776
No 47
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=3.9e-58 Score=510.87 Aligned_cols=333 Identities=21% Similarity=0.246 Sum_probs=274.0
Q ss_pred CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHH
Q 003466 374 EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 374 ~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
..|.++++++|. |+||.||| +|||+.+|+|+.++||+ ||+|++|+++|++++.+... .+.+++..+|+++|+
T Consensus 5 ~~~~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~la~~l~ 76 (364)
T PRK04013 5 RKRLRLVRGEGI--YVWDSQGR----RYLDLIAGIGVNVLGHN-HPEWVEEMSEQLEKLVVAGP-MFEHEEKEEMLEELS 76 (364)
T ss_pred CCCccEEEeecC--EEEECCCC----EEEEcccChhhccCCCC-CHHHHHHHHHHHHhcCCccC-CcCCHHHHHHHHHHH
Confidence 346678888887 79999999 99999999999999999 99999999999999876543 467999999999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
+..+ .++++|++|||||+|.|||+| |.|++| .+||+++++|||+|.+++++++.+.++
T Consensus 77 ~~~~---~~~v~~~~SGseA~e~Alkla-r~~~gr------------------~~Ii~~~~syHG~t~~~ls~~~~~~~~ 134 (364)
T PRK04013 77 KWVN---YEYVYMGNSGTEAVEAALKFA-RLYTGR------------------KEIIAMTNAFHGRTMGALSATWKPKYR 134 (364)
T ss_pred hhcC---CCEEEEeCchHHHHHHHHHHH-HHHhCC------------------CEEEEECCccccCchhhccCCCCcccc
Confidence 9885 579999999999999999999 777653 589999999999999999999866554
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
..+ .| .+ ++..++ +|||. +.+++.+.
T Consensus 135 ~~~-~p-------~~--------~~~~~~----------------~~~d~------------------~~l~~~i~---- 160 (364)
T PRK04013 135 EDF-EP-------LV--------PGFKHI----------------PFNDV------------------EAAKEAIT---- 160 (364)
T ss_pred cCC-CC-------CC--------CCcEEe----------------cCCCH------------------HHHHHHhc----
Confidence 421 01 00 111111 24442 34555553
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
++++|||+||+ |++||++++|++||++++++|++||++||+|||+||| |||++|+++++|+.|||+|+||+|||
T Consensus 161 ----~~~aAvivEpi-~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lgg 234 (364)
T PRK04013 161 ----KETAAVIFEPI-QGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIGN 234 (364)
T ss_pred ----CCcEEEEEcCC-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccccC
Confidence 47999999998 9999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCChH---------------HHH-HH-------HHHHHHcCCCeeEEEeeeeEEEEEEecCc
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK---------------LWD-LE-------LIQQISSHRTVQRVVALGTLCAIELQAAG 750 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~---------------~~~-~~-------l~~~l~~~~~v~~vrg~Gl~~~iel~~~~ 750 (818)
| +|+||++.++++......... .++ +. .++.+ ..+.+.+|||.|+|+++|+..+
T Consensus 235 G-~P~~a~~~~~~~~~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~l~~l-~~~~v~~vRG~Gl~~gve~~~~- 311 (364)
T PRK04013 235 G-VPVSLTLTNFDVERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEKFIEI-KGERVVTTRGRGLMIGIVLKKP- 311 (364)
T ss_pred C-ceeEEEEecccccCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHh-ccCcceeeeeCcEEEEEEeCCc-
Confidence 9 799999999886432211110 111 11 12222 2367899999999999999643
Q ss_pred ccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 751 CNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 751 ~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+..+.+.|+++|+++.+.| +++||.||+++|++|+++++++|+++++++
T Consensus 312 ---------~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 312 ---------VGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred ---------HHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 4468899999999999876 899999999999999999999999999764
No 48
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.1e-57 Score=516.09 Aligned_cols=367 Identities=22% Similarity=0.242 Sum_probs=291.5
Q ss_pred CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHH
Q 003466 374 EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 374 ~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
..|+++++++|. ++||.||| +||||++|+|+.++||+ ||+|++|+++|++++.+..+....+++..+|+++|+
T Consensus 14 ~~p~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~ 86 (420)
T TIGR00700 14 TLPVFAARAEGA--ILEDVDGN----RLIDFASGIAVLNIGHS-HPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLN 86 (420)
T ss_pred CCCeeEEeeeee--EEEeCCCC----EEEECccCHHhccCCCC-CHHHHHHHHHHHHhccCccccccCChHHHHHHHHHH
Confidence 347788898886 79999999 99999999999999999 999999999999998776544466889999999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC-CC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS-PY 532 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~-~~ 532 (818)
+.+|...+++|+|++|||||||+|||+| |.|+++ .+||+|+++|||+|.+++++++.. .+
T Consensus 87 ~~~p~~~~~~v~f~~sGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~~~~~~~~~~~~ 147 (420)
T TIGR00700 87 RIAPGSGPKKSVFFNSGAEAVENAVKIA-RSYTGR------------------PGVVAFDHGFHGRTNMTMALTAKVMPY 147 (420)
T ss_pred HhCCCCCCCEEEEeCCcHHHHHHHHHHH-HHhcCC------------------CcEEEECCCcCCCcHHHHHhcCCCccc
Confidence 9887433579999999999999999999 788654 489999999999999999998753 12
Q ss_pred CCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCC
Q 003466 533 TGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNP 612 (818)
Q Consensus 533 ~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~ 612 (818)
+.. .++. .++..+++.|+++++.. .. .......+.+.+++.+...
T Consensus 148 ~~~--------~~~~--------~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~~~~~~~- 192 (420)
T TIGR00700 148 KSG--------FGPF--------APEVYRAPLPYPYRDGL--------LD----------KQLSTDGELAAARAIFVID- 192 (420)
T ss_pred ccC--------CCCC--------CCCcEEeCCCccccccc--------cc----------cchhHHHHHHHHHHHHHhh-
Confidence 221 1111 12334556665543210 00 0011122345667666311
Q ss_pred CCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEeccccc
Q 003466 613 GLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLT 692 (818)
Q Consensus 613 ~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLg 692 (818)
.+++++||||+||| |+++|+++++++|+++|+++|++||++||+|||+|||||+|++|+++++|+.|||+||||+++
T Consensus 193 --~~~~~iAavi~Epi-~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~ 269 (420)
T TIGR00700 193 --VGANNVAALVIEPV-QGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLA 269 (420)
T ss_pred --cCCCcEEEEEECCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeecccc
Confidence 34689999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEe
Q 003466 693 GGVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg 737 (818)
|| +|+|++++++++++.+..... .+.+.+.+....++.+.+|||
T Consensus 270 ~G-~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg 348 (420)
T TIGR00700 270 DG-LPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRG 348 (420)
T ss_pred CC-cceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeec
Confidence 99 799999999999987742111 111122233355788899999
Q ss_pred eeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 738 LGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 738 ~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
.|+|+++++.++. ...++...+..+.+.|+++||++.|. ++.+||.||+++|+++|++++++|++++.
T Consensus 349 ~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 349 LGAMIAVELVDPG-TTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred cceEEEEEEecCC-CCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 9999999996432 12234456778889999999999985 48999999999999999999999998874
No 49
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-57 Score=516.51 Aligned_cols=359 Identities=21% Similarity=0.270 Sum_probs=288.1
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++.+..+..+.+++..+|+++|++.
T Consensus 23 p~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~ 95 (421)
T PRK06777 23 DFYAERAENA--TLWDVEGR----EYIDFAAGIAVLNTGHR-HPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINAL 95 (421)
T ss_pred CeeEEeeecC--EEEeCCCC----EEEEcccCHHhhccCCC-CHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHh
Confidence 6788898886 79999999 99999999999999999 99999999999999887655446789999999999998
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC-CCCC
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS-PYTG 534 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~-~~~~ 534 (818)
+|.+.+++++|++|||||||+|||+| |.|++| .+||+|+++|||+|.+++++++.. .++.
T Consensus 96 ~p~~~~~~~~f~~sGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~~~s~t~~~~~~~~ 156 (421)
T PRK06777 96 APIDGPAKTAFFTTGAEAVENAVKIA-RAYTGR------------------PGVIAFGGAFHGRTLLTMALTGKVAPYKV 156 (421)
T ss_pred CCCCCCceEEEeCCcHHHHHHHHHHH-HHhhCC------------------CeEEEEcCCcCCccHHHHhhcCCCccccc
Confidence 86433579999999999999999999 778654 489999999999999999998742 2222
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. ++++ .++..+++.|+..+. . ....+.+.+++.+++.
T Consensus 157 ~--------~~~~--------~~~~~~~~~p~~~~~-----------~-------------~~~~~~~~l~~~~~~~--- 193 (421)
T PRK06777 157 G--------FGPF--------PGSIFHALYPNELHG-----------V-------------SVEEALSSVERLFKAD--- 193 (421)
T ss_pred C--------CCCC--------CCCcEEcCCCccccC-----------c-------------CHHHHHHHHHHHHHhc---
Confidence 1 1111 012334444532210 0 0112345677777521
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.+++++||||+||| |+++|+.++|++|+++|+++|++||++||+|||+|||||+|++|+++++++.||++|+||+++||
T Consensus 194 ~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G 272 (421)
T PRK06777 194 IAPDQVAAILLEPI-QGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGG 272 (421)
T ss_pred cCCCceEEEEECCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCC
Confidence 24678999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... ++.+.+.+...+++.+.+|||.|
T Consensus 273 -~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G 351 (421)
T PRK06777 273 -MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARG 351 (421)
T ss_pred -CceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCce
Confidence 799999999999987753211 11122222234578899999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+|+++++..+. ...++...+..+.+.|+++||++.|. ++.+||.||+++|+++|++++++|++++.
T Consensus 352 ~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 352 SMVAVEFNDPQ-TGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred EEEEEEEecCc-cCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 99999996532 11233456777888899999999885 47999999999999999999999998873
No 50
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=2.4e-57 Score=515.46 Aligned_cols=360 Identities=21% Similarity=0.259 Sum_probs=288.7
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. +|||.||| +|||+++|+|+.++||+ ||+|.+|+++|++++.+..+..+.+++..+|+++|++
T Consensus 22 ~~~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~ 94 (421)
T PRK09792 22 CNFFAQSAENA--TLKDVEGN----EYIDFAAGIAVLNTGHR-HPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINA 94 (421)
T ss_pred CCeeEEecccc--EEEeCCCC----EEEEccCchhhhcCCCC-CHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHH
Confidence 35688898886 79999999 99999999999999999 9999999999999987765545679999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC-CCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS-PYT 533 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~-~~~ 533 (818)
.+|....++++|++|||||||+|||+| |.|+++ .+||+|+++|||+|.+++++++.. .++
T Consensus 95 ~~p~~~~~~~~f~~sGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~~~s~~~~~~~~~ 155 (421)
T PRK09792 95 LAPVSGQAKTAFFTTGAEAVENAVKIA-RAHTGR------------------PGVIAFSGGFHGRTYMTMALTGKVAPYK 155 (421)
T ss_pred hCCCCCCceEEEeCChHHHHHHHHHHH-HHhcCC------------------CeEEEECCCcCCccHHHHhhcCCCcccc
Confidence 876432479999999999999999999 777654 489999999999999999998742 122
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
.. .+++ .+++.++++|...+. .....+.+.+++.+++.
T Consensus 156 ~~--------~~~~--------~~~~~~v~~p~~~~~------------------------~~~~~~~~~l~~~~~~~-- 193 (421)
T PRK09792 156 IG--------FGPF--------PGSVYHVPYPSDLHG------------------------ISTQDSLDAIERLFKSD-- 193 (421)
T ss_pred cC--------CCCC--------CCCcEEcCCCccccc------------------------ccHHHHHHHHHHHHHhc--
Confidence 21 1111 122345555533210 00112346677777631
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
..++++||||+||+ |+++|+.++|++|+++|+++|++||++||+|||+|||||+|++|+++++|++|||+||||+|+|
T Consensus 194 -~~~~~iaavi~EPv-q~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~ 271 (421)
T PRK09792 194 -IEAKQVAAIIFEPV-QGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAG 271 (421)
T ss_pred -cCCCceEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcC
Confidence 13578999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCChH-------------------HH----------------HHHHHHHHHcCCCeeEEEee
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK-------------------LW----------------DLELIQQISSHRTVQRVVAL 738 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~-------------------~~----------------~~~l~~~l~~~~~v~~vrg~ 738 (818)
| +|+|++++++++++.+..... ++ .+.+.+..+++|.+.++||.
T Consensus 272 G-~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~ 350 (421)
T PRK09792 272 G-MPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGL 350 (421)
T ss_pred C-CceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceeccc
Confidence 9 699999999999987753211 11 11122223457889999999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
|+|+++++.++.. ..++...+..+++.|+++||++.+. ++.|||.||+++|++||++++++|+++++
T Consensus 351 Gl~~~ie~~~~~~-~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 351 GSMIAAEFNDPQT-GEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred ceEEEEEecCCcc-CCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 9999999975421 1223345778899999999999753 48999999999999999999999999874
No 51
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=1.3e-57 Score=518.40 Aligned_cols=356 Identities=21% Similarity=0.254 Sum_probs=280.7
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ||||.||| +||||+||+|+.++||+ ||+|.+|+++|++++++.......+++..+|+++|++
T Consensus 21 ~p~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~ 93 (425)
T PRK09264 21 FPVVFDKAKGS--WLYDEDGK----EYIDFFAGAGALNYGHN-NPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEE 93 (425)
T ss_pred CCccEEeeecC--EEEeCCCC----EeeecccchhhccCCCC-CHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHH
Confidence 35688888886 79999999 99999999999999999 9999999999999876654444568999999999999
Q ss_pred cc--CCCCCC-cEEEe-CChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC
Q 003466 455 GV--GKGWAS-RAYFS-DNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS 530 (818)
Q Consensus 455 ~~--~~~~l~-~v~f~-~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~ 530 (818)
.+ +.+ ++ +++|+ ||||||||+|||+| |.|++| .+||+|+++|||+|.+++++++..
T Consensus 94 ~~~~~~~-~~~~~~f~~~sGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~~ls~~~~~ 153 (425)
T PRK09264 94 TILKPRG-LDYKVQFTGPTGTNAVEAALKLA-RKVTGR------------------TNIVAFTNGFHGMTLGSLAVTGNS 153 (425)
T ss_pred hhcCCcC-CCceEEEeCCCHHHHHHHHHHHH-HHhcCC------------------CeEEEECCccCCccHHHHHhcCCc
Confidence 74 222 33 67664 89999999999999 777653 589999999999999999999865
Q ss_pred CCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhc
Q 003466 531 PYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQ 610 (818)
Q Consensus 531 ~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~ 610 (818)
.++.. +.++. .+..++++|+.++. + ....+.+++.|++
T Consensus 154 ~~~~~------------~~~~~----~~~~~~p~~~~~~~---------------------~-----~~~~~~l~~~l~~ 191 (425)
T PRK09264 154 HKRQG------------AGVPL----NNVTRMPYDGYFGG---------------------D-----VDTLAYLEKLLED 191 (425)
T ss_pred ccccC------------CCCCC----CCeEEeCCCCcccc---------------------c-----hhHHHHHHHHHHh
Confidence 44332 11111 12344454432100 0 0113567777763
Q ss_pred CCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEeccc
Q 003466 611 NPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKL 690 (818)
Q Consensus 611 ~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKg 690 (818)
.. ...+++||||+||| |+++|++++|++||++|+++|++||++||+|||||||||||++|+++++|+.|||+|+||+
T Consensus 192 ~~--~~~~~~aavi~Epv-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~ 268 (425)
T PRK09264 192 SS--SGVDLPAAVIVETV-QGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKS 268 (425)
T ss_pred cc--CCCCceEEEEEecc-cCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccc
Confidence 20 12357999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CccccceeecchHHHhhccCChH--------------------HHH------------HHHHHH----HHcCCC-e
Q 003466 691 LTG-GVIPLAATLATNAVFDSFVGDSK--------------------LWD------------LELIQQ----ISSHRT-V 732 (818)
Q Consensus 691 Lgg-Gy~PlsAvl~~~~i~~~l~~~~~--------------------~~~------------~~l~~~----l~~~~~-v 732 (818)
||+ | +|+|++++++++. .+..... ++. +.+.+. ..+++. +
T Consensus 269 l~~~G-~pigav~~~~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~ 346 (425)
T PRK09264 269 ISGYG-LPMALVLIKPELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLG 346 (425)
T ss_pred cCCCc-cceEEEEEchhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 998 7 7999999999874 3322100 111 112222 234664 4
Q ss_pred eEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC---CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 733 QRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG---NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 733 ~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g---~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
.++||.|+++++++.+. ..+..+++.|+++||++.+.+ ++|||.||+++|++||++++++|+++++++.
T Consensus 347 ~~vrg~Gl~~~i~l~~~--------~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 347 AEVRGRGMMQGIDFGDG--------ELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVL 418 (425)
T ss_pred ecceecccEEEEEecCh--------HHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999644 456788999999999998754 8999999999999999999999999998875
Q ss_pred HhH
Q 003466 810 KVE 812 (818)
Q Consensus 810 ~~~ 812 (818)
+.+
T Consensus 419 ~~~ 421 (425)
T PRK09264 419 AEE 421 (425)
T ss_pred hcc
Confidence 443
No 52
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.8e-57 Score=513.82 Aligned_cols=348 Identities=22% Similarity=0.297 Sum_probs=286.0
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ||||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+... ...+++..+|+++|++
T Consensus 22 ~~~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~L~~ 93 (408)
T PRK04612 22 RQVVLERGQGS--RVWDDQGR----EYLDLAAGIAVCGLGHN-DPDLVAALTEQAGKLWHTSN-VFYSAPPLKLAEELVT 93 (408)
T ss_pred CCceEEEeeeC--EEEECCCC----EEEEcCccHhhccCCCC-CHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHh
Confidence 46788898887 79999999 99999999999999999 99999999999999876542 3568999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
..|. .++|+|++|||||||+|||+| |+|++.+|. .++|.+||+|+++|||+|.+++++++.+.++.
T Consensus 94 ~~~~--~~~v~f~~sGseA~e~AlklA-r~~~~~~g~-----------~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~ 159 (408)
T PRK04612 94 ASRF--AEKVFLCNSGTEANEAAIKLV-RKWASSQGR-----------PADKRVIVTFRGSFHGRTLAAVTATAQPKYQE 159 (408)
T ss_pred hCCC--CCEEEEcCchHHHHHHHHHHH-HHHHHhhCC-----------CCCCcEEEEECCCcCCccHHHHHhcCCccccc
Confidence 8763 479999999999999999999 777654432 13577899999999999999999998665443
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
.| . +. | ++..++ +|||. +.+++.+.
T Consensus 160 ~~-----~---~~---~-----~~~~~~----------------~~~d~------------------~~l~~~~~----- 184 (408)
T PRK04612 160 GY-----E---PL---P-----GGFRYV----------------DFNDV------------------EALEAAMA----- 184 (408)
T ss_pred CC-----C---CC---C-----CCceEc----------------CCCCH------------------HHHHHhhC-----
Confidence 21 0 00 0 011111 14442 45566553
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++++|||+||+ |+.||+++++++|+++|+++|++||++||+|||+|||||+|++|+++++++.||++||||+||||
T Consensus 185 --~~~~aavi~eP~-~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G 261 (408)
T PRK04612 185 --GGDVAAVMLEPI-QGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGG 261 (408)
T ss_pred --CCCEEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCC
Confidence 468999999998 99999999999999999999999999999999999999999999998899999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... ++.+.+.+...+++.+.+|||.|
T Consensus 262 -~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~G 340 (408)
T PRK04612 262 -FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRG 340 (408)
T ss_pred -CceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccc
Confidence 799999999999887653211 11122333335578899999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+|+++++..+. ...+..+.+.|+++||++.+.| +++|+.||+++|++||++++++|++++.++.
T Consensus 341 l~~~i~~~~~~------~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~ 405 (408)
T PRK04612 341 LMLGAVLAPAH------AGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLALADYV 405 (408)
T ss_pred eEEEEEecCch------hhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999997431 1346778899999999999877 9999999999999999999999999997754
No 53
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.4e-57 Score=515.92 Aligned_cols=352 Identities=23% Similarity=0.290 Sum_probs=276.8
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|.++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|+++.++.......+++..+|+|+|++
T Consensus 17 ~p~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~ 89 (412)
T TIGR02407 17 FPTVFEKAKGS--TLWDEDGK----EYIDFFAGAGALNYGHN-NPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNE 89 (412)
T ss_pred CCceEEecccC--EEEeCCCC----EEEEcccchhhccCCCC-CHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHH
Confidence 46688888886 79999999 99999999999999999 9999999999999876654434568999999999999
Q ss_pred cc--CCCCCCcEEE-eCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC
Q 003466 455 GV--GKGWASRAYF-SDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP 531 (818)
Q Consensus 455 ~~--~~~~l~~v~f-~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~ 531 (818)
.. |.+...+++| +||||||||+|||+| |.|++| .+||+|+++|||+|.+++++++...
T Consensus 90 ~~~~~~~~~~~~~f~~~sGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~als~~~~~~ 150 (412)
T TIGR02407 90 IILKPRGLDYKVQFPGPTGTNAVESALKLA-RKVTGR------------------SNVVSFTNAFHGMTLGSLSVTGNRF 150 (412)
T ss_pred hccCccCCCceEEEeCCCchHHHHHHHHHH-hhhcCC------------------CeEEEECCCcCCchHHHHHhcCCcc
Confidence 74 3222236666 599999999999999 777653 5899999999999999999998654
Q ss_pred CCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcC
Q 003466 532 YTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQN 611 (818)
Q Consensus 532 ~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~ 611 (818)
++..+ + ++. .+..++++|+.. + . ...+.+.+++.+++.
T Consensus 151 ~~~~~--------~----~~~----~~~~~~p~~~~~-------------~---------~----~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 151 KRQGA--------G----VPL----SNVSRMPYDGYL-------------G---------G----DVDTIAYFEKLLEDS 188 (412)
T ss_pred cccCC--------C----CCC----CCeEECCCCCcc-------------c---------c----chhHHHHHHHHHHhc
Confidence 44321 1 110 122233333211 0 0 011235677777631
Q ss_pred CCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccc
Q 003466 612 PGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLL 691 (818)
Q Consensus 612 ~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgL 691 (818)
. .+.+++||||+||| |+++|++++|++||++|+++|++||++||+|||+|||||||++|+++++++.|||+|+||+|
T Consensus 189 ~--~~~~~~aavi~Epi-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~l 265 (412)
T TIGR02407 189 S--SGVDLPAAVILETV-QGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSI 265 (412)
T ss_pred c--CCCCceEEEEeccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhc
Confidence 0 12367999999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CccccceeecchHHHhhccCChH-------------------H-HH------------HHHHH----HHHcCC-Cee
Q 003466 692 TG-GVIPLAATLATNAVFDSFVGDSK-------------------L-WD------------LELIQ----QISSHR-TVQ 733 (818)
Q Consensus 692 gg-Gy~PlsAvl~~~~i~~~l~~~~~-------------------~-~~------------~~l~~----~l~~~~-~v~ 733 (818)
|| | +|+|++++++++ +.+..... . +. +.+.+ ..+.++ .+.
T Consensus 266 g~~G-~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~ 343 (412)
T TIGR02407 266 SGYG-LPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIK 343 (412)
T ss_pred cCCc-cceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 99 8 799999999886 54421110 1 11 11222 224566 578
Q ss_pred EEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 734 RVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 734 ~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
++||.|+|+++++.+. ..+..+.+.|+++||++.+. +++|||.||+++|++|+++++++|++++++
T Consensus 344 ~vrg~Gl~~~l~l~~~--------~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 344 QVRGRGLMQGIECGDG--------DLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred eeecceeEEEEEecCh--------HHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999654 35678899999999999864 489999999999999999999999999863
No 54
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=3.4e-57 Score=515.65 Aligned_cols=367 Identities=19% Similarity=0.223 Sum_probs=268.9
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHh--hhhcccccCCCCCChhHHHHHHHHH
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYT--AARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q--~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
|+++++++|. ||||.||| +||||+||+|+.++||+ ||+|++|+++| ...+.+.. .+.+++..+|+++|.
T Consensus 41 p~~~~~a~G~--~l~D~dG~----~ylD~~sg~~~~~lGh~-~p~i~~Ai~~q~~~~~l~~~~--~~~~~~~~~la~~l~ 111 (464)
T TIGR00699 41 LADYEKSRGN--YLVDVDGN----RLLDLYSQISSIPIGYN-NPALLKAAQSPEMATTLINRP--ALGNFPSKDWAKILK 111 (464)
T ss_pred ceEEEecccC--EEEeCCCC----EEEEccCCHhhhcCCCC-CHHHHHHHHHHHHHHhhcccc--cCCcHHHHHHHHHHH
Confidence 6688888886 79999999 99999999999999999 99999999995 44444432 467888899999985
Q ss_pred h----ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccccccc--ccCCC-------ccccccceEEEEEcCCCCCCc
Q 003466 454 Q----GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVD--FLGKD-------TTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 454 ~----~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~--~~~~~-------~~~~~~r~~II~~~~sYHG~t 520 (818)
+ ++|.+ +++|+|+||||||||+|||+| |.|++..|+..+ +.+++ +.....|.+||+|+++|||+|
T Consensus 112 ~~l~~~~p~~-~~~v~f~~SGsEAvE~AlKlA-r~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t 189 (464)
T TIGR00699 112 EGILKVAPKG-QDQVWTGMSGSDANELAFKAA-FMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRL 189 (464)
T ss_pred HhHHhhCCCC-cCEEEEeCCcHHHHHHHHHHH-HHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCcc
Confidence 4 56643 689999999999999999999 677653221000 00000 000012458999999999999
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
.+++++++.+.++.. . +|. .+..++++|+ ++++... +. ...+.+...+
T Consensus 190 ~~als~t~~~~~~~~----~---------~~~----~~~~~~p~p~-~~~~~~~-----~~---------~~~~~~~~~~ 237 (464)
T TIGR00699 190 FGSLSTTRSKPIHKL----D---------IPA----FDWPQAPFPS-LKYPLEE-----HV---------KENAKEEQRC 237 (464)
T ss_pred HHHHHhcCCcccccc----C---------CCC----CCceecCCCC-ccccccc-----cc---------ccchhHHHHH
Confidence 999999986432221 0 000 1123344443 1110000 00 0001223345
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
.+.++++|+ .+++++||||+||| |+++|+++||++||++|+++|++||++||+|||||||||||++|+++++||
T Consensus 238 l~~l~~~l~-----~~~~~iAAvI~EPv-~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv 311 (464)
T TIGR00699 238 LEEVEDLIK-----KWHKPVAAIIVEPI-QSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNL 311 (464)
T ss_pred HHHHHHHHH-----hcCCcEEEEEEeCC-CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCC
Confidence 677888886 34578999999998 999999999999999999999999999999999999999999999999999
Q ss_pred C--CcEEEeccccc-CCccccceeecchHHHh---------hccCChH--------------------------HHHHHH
Q 003466 681 V--PDIACYGKLLT-GGVIPLAATLATNAVFD---------SFVGDSK--------------------------LWDLEL 722 (818)
Q Consensus 681 ~--PDivtlgKgLg-gGy~PlsAvl~~~~i~~---------~l~~~~~--------------------------~~~~~l 722 (818)
+ |||+|+||+|| ||| +++ ++ .++ ++..... ++.+.+
T Consensus 312 ~~~PDi~t~gK~lg~gG~-~~~----~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L 385 (464)
T TIGR00699 312 DDPPDMVTFSKKFQTAGY-FFH----DP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGL 385 (464)
T ss_pred CCCCCEEEehhhhccCCc-ccc----ch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 7 99999999995 685 322 22 111 1111110 122233
Q ss_pred HHHHHcCC-CeeEEE--eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHH
Q 003466 723 IQQISSHR-TVQRVV--ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLL 798 (818)
Q Consensus 723 ~~~l~~~~-~v~~vr--g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~ 798 (818)
.+..++++ .|.+|| |.|+|+++++... ..+..+.+.|+++||++.+.| ++|||.||+++|++|||+++
T Consensus 386 ~~l~~~~~~~i~~vRg~G~Glm~gie~~~~--------~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~ 457 (464)
T TIGR00699 386 EDLQKKYPEFIQNLRGKGRGTFIAWDTPDE--------AKRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFL 457 (464)
T ss_pred HHHHHhCCCceeeecccCeEEEEEEecCCH--------HHHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHH
Confidence 33335688 689999 9999999998532 346789999999999999877 89999999999999999999
Q ss_pred HHHHHHH
Q 003466 799 LKLYQRL 805 (818)
Q Consensus 799 ~~l~~~l 805 (818)
++|++++
T Consensus 458 ~~l~~~~ 464 (464)
T TIGR00699 458 EIISKII 464 (464)
T ss_pred HHHHHhC
Confidence 9998864
No 55
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-57 Score=557.94 Aligned_cols=364 Identities=20% Similarity=0.214 Sum_probs=286.5
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|.++++++|. |+||.||| +||||++++ .++||+ ||+|++|+++|++++.+.+ .+.++.+.+|+++|++
T Consensus 567 ~p~~i~~g~G~--~l~D~dG~----~ylD~~~~~--~~lGh~-hp~v~~Ai~~q~~~l~~~~--~~~~~~~~elae~L~~ 635 (972)
T PRK06149 567 DPPQIERGWRH--HLFDMAGR----SYLDMVNNV--TVLGHG-HPRLAAAAARQWSLLNTNS--RFHYAAVAEFSERLAA 635 (972)
T ss_pred CCCeEEEeeee--EEEeCCCC----EEEECCCCc--cccCCC-CHHHHHHHHHHHHhccccc--cccCHHHHHHHHHHHH
Confidence 35678888886 79999999 999999885 379999 9999999999999876543 3567899999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
++|.+ +++|+|+||||||||+|||+| |.|+++ .+||+++++|||+|.+++++++....+.
T Consensus 636 ~~p~~-~~~v~f~~SGsEA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~ga~~~s~~~~~~~ 695 (972)
T PRK06149 636 LAPDG-LDTVFLVNSGSEANDLAIRLA-WAASGR------------------RDVVSVLEAYHGWTVATDAVSTSIADNP 695 (972)
T ss_pred hCCCC-cCEEEEeCCchHHHHHHHHHH-HHhcCC------------------CeEEEEeCCCCCcChhHhhhcCCccccc
Confidence 98754 689999999999999999999 778654 5899999999999999998876432111
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. ++.. .+ .++.+++.|+.++++ |++. .....|.+.+++.++...
T Consensus 696 ~----~~~~------~~-----~~v~~~~~p~~~~~~--------~~~~-----------~~~~~~~~~~~~~l~~~~-- 739 (972)
T PRK06149 696 Q----ALET------RP-----DWVHPVESPNTYRGR--------FRGA-----------DSAADYVRDVVAQLEELD-- 739 (972)
T ss_pred c----ccCC------CC-----CCeEEeCCCcccCCc--------CCCc-----------ccHHHHHHHHHHHHHHHh--
Confidence 0 1000 00 123344555544321 2110 001223334444443211
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc-cchhcccCCCCcEEEecccccC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-ETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~~a~e~~gv~PDivtlgKgLgg 693 (818)
.+++++||||+||| ||+||++++|++||++|+++|++||++||+|||||||||||+ +|+++++||+|||+|+||+|||
T Consensus 740 ~~~~~iAavI~Epv-~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~ 818 (972)
T PRK06149 740 ASGRGLAGFICEPV-YGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGN 818 (972)
T ss_pred hcCCceEEEEEccc-ccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccC
Confidence 34678999999998 999999999999999999999999999999999999999998 7799999999999999999999
Q ss_pred CccccceeecchHHHhhccCC----h-H-------------------------------HHHHHHHHHHHcCCCeeEEEe
Q 003466 694 GVIPLAATLATNAVFDSFVGD----S-K-------------------------------LWDLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~----~-~-------------------------------~~~~~l~~~l~~~~~v~~vrg 737 (818)
| +|+|||++++++++.+... + . ++.+.+.+...+++.+.+|||
T Consensus 819 G-~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG 897 (972)
T PRK06149 819 G-HPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHG 897 (972)
T ss_pred C-eeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEee
Confidence 9 7999999999999877531 0 0 122233333456899999999
Q ss_pred eeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC---CEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 738 LGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG---NVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 738 ~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g---~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
.|+|++++|..+.....++...+..+++.|+++||++.+.| ++|+|.||+++|++|||+++++|++++++
T Consensus 898 ~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 898 MGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred cceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 99999999976533333445567889999999999999865 89999999999999999999999999865
No 56
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=7.9e-57 Score=513.43 Aligned_cols=363 Identities=20% Similarity=0.275 Sum_probs=273.5
Q ss_pred EEEeecCCeeEEEeC-CcCccccceeecccccccccCCCCCCHHHHH--HHHHhhhhccc--ccCCCCCChhHHHHHHHH
Q 003466 378 VIDSRCGENFSVYQD-QKNKFIGQQFDACASWWTQGPDATLQIELAR--DMGYTAARFGH--VMFPENVYEPALECAELL 452 (818)
Q Consensus 378 vi~~~~G~~~~v~D~-dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~e--Ai~~q~~~~~~--~~~~~~~~~~~~eLae~L 452 (818)
++.+++|. |+||. ||| +|||+++|+|+.++||+ ||+|++ |+++|++++.+ .....+.+++..+|+++|
T Consensus 29 ~i~~a~G~--~l~D~~dG~----~ylD~~~g~~~~~lGh~-~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l 101 (443)
T PRK08297 29 DLERSQGS--YLVDARTGR----RYLDMFTFFASSALGMN-HPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTF 101 (443)
T ss_pred EEEeccCC--EEEECCCCC----EeeecccCHhhhcCCCC-ChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHH
Confidence 46777776 79995 999 99999999999999999 999999 99999998763 223346789999999999
Q ss_pred HhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhc----ccccccccCCCccccccceEEEEEcCCCCCCccccccccC
Q 003466 453 LQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFD----HEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQA 528 (818)
Q Consensus 453 ~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~----~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg 528 (818)
+++.+++.+++|+|+||||||||+|||+| |+|+.+ +|. .+++|.+||+|+++|||+|.+++++++
T Consensus 102 ~~~~~p~~~~~v~f~~SGsEAve~AlKlA-r~~~~~~~~~~g~----------~~~~r~kii~~~~~yHG~t~~als~~~ 170 (443)
T PRK08297 102 ARVLGDPELPHLFFVDGGALAVENALKVA-FDWKSRKNEARGI----------DPALGTKVLHLRGAFHGRSGYTLSLTN 170 (443)
T ss_pred HhhcCCCCCCEEEEeCchHHHHHHHHHHH-HHHhhccccccCC----------CCCCCceEEEECCCcCCcchhhhhhcC
Confidence 99873233689999999999999999999 677532 221 002478999999999999999999997
Q ss_pred CCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHH
Q 003466 529 PSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNL 608 (818)
Q Consensus 529 ~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L 608 (818)
...++.. ++. ..+.+ +++.|.... ++++. ...+...+...+.+.+++.+
T Consensus 171 ~~~~~~~----~~~----~~~~~---------~~~~~~~~~---------~~~~~-----~~~~~~~~~~~~~~~~~~~i 219 (443)
T PRK08297 171 TDPRKTA----RFP----KFDWP---------RIDNPKLRF---------PLPGE-----DLEEVEALEAEALAQARAAF 219 (443)
T ss_pred Ccccccc----cCC----CCCcc---------ccCCCCCCC---------CCccc-----ccchhhHHHHHHHHHHHHHH
Confidence 5432221 110 00000 111111100 00000 00001122333456777888
Q ss_pred hcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec
Q 003466 609 LQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG 688 (818)
Q Consensus 609 ~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg 688 (818)
. .+++++||||+||| |++||+++||++||++|+++|++||++||+|||+|||||||++|+++++|++|||+|+|
T Consensus 220 ~-----~~~~~iAavI~EPi-~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g 293 (443)
T PRK08297 220 E-----RHPHDIACFIAEPI-QGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFG 293 (443)
T ss_pred H-----hCCCcEEEEEEccc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEec
Confidence 6 35789999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccceeecchHHHhh----ccC-----Ch----H---------------------------HHHHHHHHHHHc
Q 003466 689 KLLTGGVIPLAATLATNAVFDS----FVG-----DS----K---------------------------LWDLELIQQISS 728 (818)
Q Consensus 689 KgLggGy~PlsAvl~~~~i~~~----l~~-----~~----~---------------------------~~~~~l~~~l~~ 728 (818)
|+| |++++++++++.+. +.. .. . .+.+.+.+..++
T Consensus 294 K~l-----~~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~ 368 (443)
T PRK08297 294 KKT-----QVCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAE 368 (443)
T ss_pred ccc-----cccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 997 45567777665432 210 00 0 111223333355
Q ss_pred CCCee-EEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 729 HRTVQ-RVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 729 ~~~v~-~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
++.+. +|||.|+|+++++.+. ..+..+++.|+++||++.+.+ +.+||+||++||++|||+++++|+++++
T Consensus 369 ~~~~~~~vrg~G~~~~i~~~~~--------~~~~~~~~~l~~~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~ 440 (443)
T PRK08297 369 FPAVVSNVRGRGLMCAFDLPTT--------ADRDEVIRRLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALP 440 (443)
T ss_pred CCCcceeeeccceEEEEEecCH--------HHHHHHHHHHHHCCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 77665 9999999999999643 346678999999999999876 8999999999999999999999999987
Q ss_pred HH
Q 003466 807 EF 808 (818)
Q Consensus 807 ~l 808 (818)
++
T Consensus 441 ~~ 442 (443)
T PRK08297 441 EV 442 (443)
T ss_pred hh
Confidence 65
No 57
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=7.1e-57 Score=512.60 Aligned_cols=348 Identities=18% Similarity=0.273 Sum_probs=275.4
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+. ++.+++..+|+++|++
T Consensus 35 ~p~~~~~a~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~---~~~~~~~~~la~~l~~ 104 (428)
T PRK12389 35 APVVMERGKGA--YFYDVDGN----KYIDYLAAYGPIITGHA-HPHITKAITEAAENGVLY---GTPTELEIEFAKMLKE 104 (428)
T ss_pred CCeEEEeccCC--EEEeCCCC----EEEEccccccccccCCC-CHHHHHHHHHHHHhCCcc---CCCCHHHHHHHHHHHH
Confidence 47788898886 79999999 99999999999999999 999999999999987543 3578999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.+|. +++|+|++|||||||+|||+| |.|++| .+||+|+++|||+|.+++++++...++.
T Consensus 105 ~~p~--~~~v~f~~sGseA~e~AlklA-r~~tgr------------------~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 163 (428)
T PRK12389 105 AIPS--LEKVRFVNSGTEAVMTTIRVA-RAYTGR------------------TKIIKFAGCYHGHSDLVLVAAGSGPSTL 163 (428)
T ss_pred hCCC--CcEEEEeCCHHHHHHHHHHHH-HHhhCC------------------CEEEEECCCcCCChHHHHHhcCCccccc
Confidence 8873 689999999999999999999 788654 5899999999999999999987543221
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. .|...+ +..+ ..|..++ ++|||. +.+++.+++
T Consensus 164 ~--~~~~~~----~~~~-----------~~~~~~~--------~~~~d~------------------~~l~~~l~~---- 196 (428)
T PRK12389 164 G--TPDSAG----VPKS-----------IAQEVIT--------VPFNDI------------------EALKEALDK---- 196 (428)
T ss_pred C--CCCCCC----CCCc-----------ccCceEE--------cCCCCH------------------HHHHHHHHh----
Confidence 0 011000 0000 0011110 225543 556677763
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++++||||+||| |+++|+++||++||++|+++|++||++||+||||||| |||.+|+++++||+|||+|+||+||||
T Consensus 197 -~~~~vaavi~EPv-~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG 273 (428)
T PRK12389 197 -WGDEVAAVLVEPI-VGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGG 273 (428)
T ss_pred -cCCcEEEEEEeCC-CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCC
Confidence 3578999999998 9999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCCh---H-----------------------------------HHHHHHHHHHHcCCCeeEE-
Q 003466 695 VIPLAATLATNAVFDSFVGDS---K-----------------------------------LWDLELIQQISSHRTVQRV- 735 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~---~-----------------------------------~~~~~l~~~l~~~~~v~~v- 735 (818)
+|+||+++++++++.+.... . ++.+.+.+..++++.+.++
T Consensus 274 -~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~ 352 (428)
T PRK12389 274 -LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITIN 352 (428)
T ss_pred -CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 79999999999999874211 0 1112233333457877777
Q ss_pred EeeeeEEEEEEecCccc-----CCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 736 VALGTLCAIELQAAGCN-----AGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 736 rg~Gl~~~iel~~~~~~-----~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
|+.| ++++++..+... ..++...+..+.+.|+++||++.+.+ +. +.||++||++||+++++++++++++
T Consensus 353 r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 353 RLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKYEA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred ecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCCCC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 7777 889999754211 01133456788999999999998864 33 4689999999999999999999865
No 58
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=1.9e-56 Score=504.85 Aligned_cols=344 Identities=24% Similarity=0.301 Sum_probs=282.3
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ++||.||| +||||+||+|+++|||+ ||+|++|+++|++++.+... .+.++++.+|+++|++
T Consensus 17 ~~~~~~~~~G~--~l~d~dG~----~ylD~~~g~~~~~lGh~-~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~L~~ 88 (397)
T TIGR03246 17 APFIPVRGEGS--RVWDQQGK----EYIDFAGGIAVNALGHA-HPELVKALIEQADKLWHIGN-GYTNEPVLRLAKKLVD 88 (397)
T ss_pred CCceEEEeecC--EEEeCCCC----EEEECCcCHhhccCCCC-CHHHHHHHHHHHHhcccccC-ccCCHHHHHHHHHHHh
Confidence 46788898887 79999999 99999999999999999 99999999999998654432 4568899999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
+.+ .++++|++|||||||+|||+| |.|+.+++. ++|.+||+++++|||+|.+++++++.+.++.
T Consensus 89 ~~~---~~~~~f~~SGseA~e~Alk~a-r~~~~~~~~------------~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~ 152 (397)
T TIGR03246 89 ATF---ADKVFFCNSGAEANEAALKLA-RRYALDKHG------------ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQ 152 (397)
T ss_pred hCC---CCEEEEeCCcHHHHHHHHHHH-HHHHHhcCC------------CCCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 886 379999999999999999999 777654322 4678999999999999999999998654443
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
.| .+. ++ +..+ ++|||. +.+++.+.
T Consensus 153 ~~--------~~~--~~------~~~~----------------~~~~d~------------------~~l~~~l~----- 177 (397)
T TIGR03246 153 GF--------APL--PG------GIKH----------------APYNDL------------------AAAKALIS----- 177 (397)
T ss_pred CC--------CCC--CC------ceEE----------------eCCCCH------------------HHHHHHhc-----
Confidence 21 000 01 1111 125653 55666663
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
++++|||+||+ ++++|+++||++||++|+++|++||++||+|||||||||+|++|+++++|+.||++|+||+||||
T Consensus 178 ---~~~aavi~Epi-~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lggG 253 (397)
T TIGR03246 178 ---DKTCAVIVEPI-QGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGG 253 (397)
T ss_pred ---cCeEEEEEecc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhhCC
Confidence 36999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HH------------HHHHHHHH----HcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LW------------DLELIQQI----SSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~------------~~~l~~~l----~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... .+ .+.+.+.| .+++.+.++||.|
T Consensus 254 -~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G 332 (397)
T TIGR03246 254 -FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKG 332 (397)
T ss_pred -cceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCc
Confidence 799999999999988753211 00 01122222 3466788999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+++++++.+.. ...+..+++.|+++|+++.+.| +.+|+.||+++|++||++++++|++++.++
T Consensus 333 ~~~~i~~~~~~------~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 333 LLIGAVLTEAY------QGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred eEEEEEEcCch------hhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999997531 1346789999999999998866 899999999999999999999999988653
No 59
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2e-56 Score=503.68 Aligned_cols=342 Identities=23% Similarity=0.274 Sum_probs=269.6
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++.+++|. ++||.||| +||||+||+|++++||+ ||+|++|+++|++++.+... ...+++..+|+++|.+
T Consensus 18 ~~~~~~~~~G~--~~~d~dG~----~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~la~~l~~ 89 (395)
T PRK03715 18 PDIVFTHGKGS--WLYDHNGK----RYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLINPSP-AFYNEPMAKLAGLLTQ 89 (395)
T ss_pred CCceEEeeecC--EEEECCCC----EEEECCcChhhccCCCC-CHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHhh
Confidence 45688888887 79999999 99999999999999999 99999999999999876543 4568999999999998
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
..+ .++++|++||+||||+|+|+| |.|+++. . ++|.+||+++++|||+|.+++++++.+.++.
T Consensus 90 ~~~---~~~v~f~~SGseA~e~Aik~a-r~~~~~~-~------------~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 152 (395)
T PRK03715 90 HSC---FDKVFFANSGAEANEGAIKLA-RKWGRKH-K------------NGAYEIITFDHSFHGRTLATMSASGKPGWDT 152 (395)
T ss_pred ccC---CCEEEEeCCcHHHHHHHHHHH-HHHhhcc-C------------CCCcEEEEECCCcCCChHHHHhhcCCccccc
Confidence 754 579999999999999999999 6665432 1 4578999999999999999999998654433
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. +.+ . .+ +..+ .+|||. +.+++.+.
T Consensus 153 ~-----~~~---~--~~------~~~~----------------~~~~d~------------------~~l~~~l~----- 177 (395)
T PRK03715 153 I-----FAP---Q--VP------GFPK----------------AELNDI------------------ASVEKLIT----- 177 (395)
T ss_pred C-----CCC---C--CC------Ccee----------------eCCchH------------------HHHHHHcC-----
Confidence 2 000 0 00 0000 113432 45665553
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
++++|||+||+ |++||+++||++|+++|+++|++||++||+|||||||||||++|+++++|++|||+|+||+||||
T Consensus 178 ---~~~aavi~Epv-~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg~G 253 (395)
T PRK03715 178 ---DKTVAVMLEPV-QGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGG 253 (395)
T ss_pred ---CCceEEEEeCC-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhhCC
Confidence 46899999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCC---h----H-----------HHH------------HHHHHHH----HcCCCeeEEEeeee
Q 003466 695 VIPLAATLATNAVFDSFVGD---S----K-----------LWD------------LELIQQI----SSHRTVQRVVALGT 740 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~---~----~-----------~~~------------~~l~~~l----~~~~~v~~vrg~Gl 740 (818)
+|+|+++++++++...... . . +++ +.+.+.+ .+++ +.++||.|+
T Consensus 254 -~p~~av~~~~~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Gl 331 (395)
T PRK03715 254 -VPLAALLAKAEVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG-LEGERGEGL 331 (395)
T ss_pred -cceEEEEEccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEccee
Confidence 7999999999987432111 0 0 111 1122223 3444 778999999
Q ss_pred EEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 741 LCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 741 ~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
|+++++.++. .......+..++++||++.+. ++++||.||+++|++|||+++++|+++++++
T Consensus 332 m~~i~l~~~~------~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 332 LRALLLGKDI------GPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EEEEEecCch------HHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9999997531 011223333444459999754 5899999999999999999999999998764
No 60
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.5e-56 Score=489.27 Aligned_cols=375 Identities=21% Similarity=0.262 Sum_probs=294.9
Q ss_pred hccchhhhcCcc----ccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHH
Q 003466 350 LCDMPKRAGELF----WWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDM 425 (818)
Q Consensus 350 ~~~l~~~~~~~~----~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi 425 (818)
+.++.+++.+++ +.|.+..+.+. ..|+++.+++|. ++||+||| +|||++.+|+...+||+ ||.|++|+
T Consensus 7 S~~l~~~A~~~~pGGvnspvra~~~v~-~~P~fi~~g~Ga--~l~DvDGn----~YIDy~~~~Gp~ilGH~-~p~V~~Av 78 (432)
T COG0001 7 SEALFERAKKVIPGGVNSPVRAFKSVG-GYPIFIERGKGA--YLTDVDGN----EYIDYVLGWGPLILGHA-HPAVVEAV 78 (432)
T ss_pred hHHHHHHHhhhCCCCCCccccccCCCC-CCCeeEEeccCC--eEEeCCCC----EeeehhccCcccccCCC-CHHHHHHH
Confidence 344555555544 45655554442 478999999997 79999999 99999999999999999 99999999
Q ss_pred HHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCcccccc
Q 003466 426 GYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCI 505 (818)
Q Consensus 426 ~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~ 505 (818)
++|+++...+ +..++...++||.|++.+|. .++|.|+|||+||++.|||+| |.||+|
T Consensus 79 ~~~l~~G~~f---g~Pte~Ei~~Aell~~~~p~--~e~vrfvnSGTEAtmsAiRlA-Ra~TgR----------------- 135 (432)
T COG0001 79 QEQLERGLSF---GAPTELEVELAELLIERVPS--IEKVRFVNSGTEATMSAIRLA-RAYTGR----------------- 135 (432)
T ss_pred HHHHHhcCCC---CCCCHHHHHHHHHHHHhcCc--ccEEEEecchhHHHHHHHHHH-HHhhCC-----------------
Confidence 9999986543 45789999999999999985 689999999999999999999 999876
Q ss_pred ceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccc
Q 003466 506 ELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDE 585 (818)
Q Consensus 506 r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~ 585 (818)
.+||.|+|+|||+....+--.|...-... .|. .|. +|......+ --++|||+
T Consensus 136 -~kIikF~G~YHG~~D~~lv~agsg~~t~g--~p~---------s~G-----------vp~~~a~~t---i~~~yND~-- 187 (432)
T COG0001 136 -DKIIKFEGCYHGHSDSLLVKAGSGAATLG--SPS---------SPG-----------VPADVAKHT---LVLPYNDL-- 187 (432)
T ss_pred -CeEEEEcCCCCCCccHHHhhcCcCcccCC--CCC---------CCC-----------CChhhhccE---EEecCCCH--
Confidence 59999999999999777654432111100 011 111 111111100 12458985
Q ss_pred hhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccC
Q 003466 586 IFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTG 665 (818)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TG 665 (818)
+.++++++ ..+++|||||+||| +++.|+++|+++|+++||+||++||++||+|||+||
T Consensus 188 ----------------~al~~~~~-----~~g~~IAaVIvEPv-~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTG 245 (432)
T COG0001 188 ----------------EALEEAFE-----EYGDDIAAVIVEPV-AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITG 245 (432)
T ss_pred ----------------HHHHHHHH-----HcCCcEEEEEeccc-cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhh
Confidence 67888887 45789999999998 999999999999999999999999999999999999
Q ss_pred cccCCccchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCChH-----------------------------
Q 003466 666 FWRLGVETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDSK----------------------------- 716 (818)
Q Consensus 666 fGRtG~~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~~----------------------------- 716 (818)
| |.+..+++++|||+||+.||||.+||| +|+||+.+++++|+.+....+
T Consensus 246 F-R~~~gGaq~~~gi~PDlttlGKiIGGG-lP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~ 323 (432)
T COG0001 246 F-RVALGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEG 323 (432)
T ss_pred c-ccCCcccccccCcCcchhhhhhhhcCC-cceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhccc
Confidence 9 999999999999999999999999999 799999999999997765433
Q ss_pred ----------HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCC------chHHHHHHHHHHHhCCceEeecCCE
Q 003466 717 ----------LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGY------GSLYAASLLKKLREDGVYMRPLGNV 780 (818)
Q Consensus 717 ----------~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~------~~~~a~~~~~~l~e~Gvlv~p~g~~ 780 (818)
.+.+.+.+.+.++.....|.+.|.|+.+.|...+ ...+ +.+....+.+.|+++||++.|+.-.
T Consensus 324 ~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~-~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~e 402 (432)
T COG0001 324 VYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEG-VRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFE 402 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCC-CCCHHHHHhhchHHHHHHHHHHHhCCcccCCcccc
Confidence 1223345556677777889999999999998753 2222 2223445666999999999998622
Q ss_pred EEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 781 IYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 781 ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
-.| .+..||++|||+++++++++++++.
T Consensus 403 a~f-lS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 403 AGF-LSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred cee-eecccCHHHHHHHHHHHHHHHHHhh
Confidence 223 3445999999999999999988764
No 61
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2.6e-56 Score=501.02 Aligned_cols=343 Identities=23% Similarity=0.314 Sum_probs=279.5
Q ss_pred EeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCC
Q 003466 380 DSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG 459 (818)
Q Consensus 380 ~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~ 459 (818)
++++|. |+||.||| +||||++|+|+.++||+ ||+|.+|+++|++++.+... .+.+++..+|+++|++..+
T Consensus 2 ~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~~-- 71 (382)
T PLN00144 2 VSGKGC--KLYDVEGK----EYLDMAAGIAVNALGHG-DPDWVKAVAEQAGTLAHVSN-VYHTIPQVELAKRLVASSF-- 71 (382)
T ss_pred eeeecc--EEEeCCCC----EEEECCcCHHhccCCCC-CHHHHHHHHHHHHhcCCccc-cccCHHHHHHHHHHHhcCC--
Confidence 456665 79999999 99999999999999999 99999999999999877643 3458999999999999875
Q ss_pred CCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCC
Q 003466 460 WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQP 539 (818)
Q Consensus 460 ~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p 539 (818)
.++|+|++|||||||+|||+| |.|++++|... +.....+|.+||+|+++|||+|.+++++++...++..|
T Consensus 72 -~~~v~f~~sGseA~e~AlklA-r~~~~~~~~~~-----~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~--- 141 (382)
T PLN00144 72 -ADRVFFCNSGTEANEAAIKFA-RKYQRVRAPDK-----KDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPF--- 141 (382)
T ss_pred -CCeEEEeCCcHHHHHHHHHHH-HHHHhccCCCC-----ccccccccceEEEECCCcccccHHHHhcCCCccccccC---
Confidence 479999999999999999999 88887654300 00000126799999999999999999999865444321
Q ss_pred cccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCc
Q 003466 540 WYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGC 619 (818)
Q Consensus 540 ~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~ 619 (818)
.+. .| +..++ +|||+ +.+++.++ .++
T Consensus 142 -----~~~--~~------~~~~~----------------~~~d~------------------~~l~~~~~-------~~~ 167 (382)
T PLN00144 142 -----EPL--MP------GVTFV----------------EYGNL------------------EAARKLIQ-------KGK 167 (382)
T ss_pred -----CCC--CC------CeEEe----------------CCCCH------------------HHHHHhcC-------CCC
Confidence 000 01 11121 25553 45666653 368
Q ss_pred EEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCccccc
Q 003466 620 IGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVIPLA 699 (818)
Q Consensus 620 iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~Pls 699 (818)
++|||+||+ |+.||+.+++.+|+++|+++|++||++||+|||+|||||+|++|+++++++.|||+||||+|+|| +|+|
T Consensus 168 ~aavi~eP~-q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G-~pig 245 (382)
T PLN00144 168 TAAVFVEPV-QGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIG 245 (382)
T ss_pred eEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCC-cceE
Confidence 999999998 99999999999999999999999999999999999999999999999999999999999999999 7999
Q ss_pred eeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEeeeeEEEE
Q 003466 700 ATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVALGTLCAI 744 (818)
Q Consensus 700 Avl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~Gl~~~i 744 (818)
++++++++++.+..... .+.+.+.+.+.++|.+.+|||.|+++++
T Consensus 246 ~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l 325 (382)
T PLN00144 246 AVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGI 325 (382)
T ss_pred EEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEE
Confidence 99999999988753211 1112233445677888999999999999
Q ss_pred EEecCcccCCCchHHHHHHHHHHHhCCceEeecC--CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 745 ELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG--NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 745 el~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g--~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+|... +..+++.|+++||++.+.+ +.||+.||+++|++||++++++|++++.++
T Consensus 326 ~l~~~----------~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 326 QLDVP----------AGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred EecCc----------cHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 99322 3568899999999999864 899999999999999999999999999764
No 62
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=1.5e-55 Score=503.73 Aligned_cols=383 Identities=17% Similarity=0.148 Sum_probs=295.6
Q ss_pred HHHHHHHHHHHHHhhccchhhhcCccccc--cCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccC
Q 003466 336 KNIMLLAYSERIQRLCDMPKRAGELFWWP--FTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGP 413 (818)
Q Consensus 336 ~~~l~~~~~~r~~~~~~l~~~~~~~~~~p--~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~l 413 (818)
.+.+...|.++..++..+.+++++++..- ++....++...|+++++++|. ++||.||| +|||+.+|+|+.++
T Consensus 16 ~~~~~~~~~~~~~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~--~v~D~DG~----~yiD~~~g~g~~~l 89 (453)
T PRK07046 16 LARERARFLEAHPRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGA--RFTDVDGH----RYDDFCLGDTGAMF 89 (453)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeC--EEEeCCCC----EEEEeccccccccc
Confidence 34455566777788888889988877553 333333323468889999887 79999999 99999999999999
Q ss_pred CCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccc
Q 003466 414 DATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLV 493 (818)
Q Consensus 414 Gh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~ 493 (818)
||+ ||+|.+|+++|+++..+. +..++...+|||+|++.++ .++|+|+|||+||||.|||+| |.||+|
T Consensus 90 Gh~-~p~i~~Av~~q~~~~~~~---~~~~~~~~~lAe~l~~~~~---~~~v~F~nSGtEA~e~AlrlA-R~~TGr----- 156 (453)
T PRK07046 90 GHS-PAPVARALAEQARRGLTT---MLPSEDAAWVGEELARRFG---LPYWQVATTATDANRFVLRWA-RAVTGR----- 156 (453)
T ss_pred CCC-CHHHHHHHHHHHHhCCCC---CCCCHHHHHHHHHHHHHhC---CCEEEEECCHHHHHHHHHHHH-HHhhCC-----
Confidence 999 999999999999986543 3568999999999999885 589999999999999999999 888764
Q ss_pred cccCCCccccccceEEEEEcCCCCCCcccccccc--CCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhh
Q 003466 494 DFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQ--APSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSK 571 (818)
Q Consensus 494 ~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~t--g~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~ 571 (818)
.+||.|+++|||++.+++... +...++. .+.+ .|. ...+.. ..
T Consensus 157 -------------~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~-----~~~g------~~~-~~~~~~--~~-------- 201 (453)
T PRK07046 157 -------------PKILVFNGCYHGTVDDVFVDLVDGRPVQRP-----GLLG------QVH-DLTATT--RV-------- 201 (453)
T ss_pred -------------CEEEEECCCCCCCcHHhHhhccCCCCCCCC-----CCCC------CCc-cccCce--Ee--------
Confidence 589999999999987666432 2111111 0000 000 000000 11
Q ss_pred ccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHH
Q 003466 572 IVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQ 651 (818)
Q Consensus 572 ~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~ 651 (818)
++|||. +.+++.+. .+++||||+||| |+++|+++|+++||++||++|+
T Consensus 202 ------~~~nd~------------------~~l~~~l~-------~~~vAavi~EPi-~g~~G~~~p~~~fl~~lr~lc~ 249 (453)
T PRK07046 202 ------VEFNDL------------------AALEAALA-------DGDVAAVLAEPA-MTNIGMVLPEPGFHEALRELTR 249 (453)
T ss_pred ------eCCCCH------------------HHHHHHhC-------CCCeEEEEECCC-CCCCCCcCCCHHHHHHHHHHHH
Confidence 236663 55666663 368999999998 9999999999999999999999
Q ss_pred hcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCccccceeecchHHHhhccC-------Ch--H------
Q 003466 652 NRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVG-------DS--K------ 716 (818)
Q Consensus 652 ~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~-------~~--~------ 716 (818)
+||++||+|||+| | |+|.++.++++||+|||+|+||+|||| +|+||+++++++++.+.. .. .
T Consensus 250 ~~g~llI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG-~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~g 326 (453)
T PRK07046 250 RYGTLLVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSA 326 (453)
T ss_pred HhCCEEEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCC-CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcc
Confidence 9999999999999 6 677777788899999999999999999 799999999999998742 00 0
Q ss_pred -----------------------------HHHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccC------CCchHHHH
Q 003466 717 -----------------------------LWDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNA------GYGSLYAA 761 (818)
Q Consensus 717 -----------------------------~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~------~~~~~~a~ 761 (818)
.+.+.+.+.+.+++.+..|+|.|+++.+++..+.... ..+.....
T Consensus 327 npl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 406 (453)
T PRK07046 327 NALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEA 406 (453)
T ss_pred cHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHH
Confidence 1122333334567888899999999999986432110 11234566
Q ss_pred HHHHHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 762 SLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 762 ~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
.++..|+++||++.+.++.++++|+ ||++|||+++++++++++++.
T Consensus 407 ~~~~~~~~~Gv~~~~~~~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 407 ALHLYLLNRGVLITPFHNMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHCCCEEecccCcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 7888999999999987777888886 999999999999999998764
No 63
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=2.3e-55 Score=503.26 Aligned_cols=345 Identities=18% Similarity=0.239 Sum_probs=266.2
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +|||+++|+|+.++||+ ||+|.+|+++|++++.+. ...+++..+|||+|++
T Consensus 81 ~p~~~~~a~G~--~l~D~dG~----~yiD~~~g~g~~~lGh~-~p~v~~av~~ql~~~~~~---~~~~~~~~~lAe~l~~ 150 (474)
T PLN02482 81 QPIVFDRVKGS--YAWDVDGN----EYIDYVGSWGPAIIGHA-DDEVLAALAETMKKGTSF---GAPCLLENVLAEMVID 150 (474)
T ss_pred CCeeEEEeeeC--EEEECCCC----EEEEecccccccccCCC-CHHHHHHHHHHHhhCCCC---CCCCHHHHHHHHHHHH
Confidence 47889998887 79999999 99999999999999999 999999999999987643 3568999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccc--cccCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAM--EAQAPSPY 532 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~al--s~tg~~~~ 532 (818)
.+|. +++|+|+|||+||||.|||+| |.||+| .+||.|+++|||++...+ +.++....
T Consensus 151 ~~p~--~~~v~f~~SGsEA~e~AlklA-R~~tgr------------------~~Ii~~~g~YHG~~~~~~~~~~~~~~~~ 209 (474)
T PLN02482 151 AVPS--VEMVRFVNSGTEACMGVLRLA-RAYTGR------------------EKIIKFEGCYHGHADSFLVKAGSGVATL 209 (474)
T ss_pred hCCC--CCEEEEeCChHHHHHHHHHHH-HHhcCC------------------CEEEEECCccCCCcchhhhhcCCCcccc
Confidence 8874 689999999999999999999 888764 589999999999875433 33322111
Q ss_pred CCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCC
Q 003466 533 TGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNP 612 (818)
Q Consensus 533 ~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~ 612 (818)
.. ++..+ . |. ...++.+ -++|||+ +.+++.|+
T Consensus 210 ~~----~~~~g----~--~~---------~~~~~~~--------~~~~nd~------------------~~l~~~l~--- 241 (474)
T PLN02482 210 GL----PDSPG----V--PK---------AATSATL--------TAPYNDL------------------EAVKKLFE--- 241 (474)
T ss_pred CC----CCCCC----C--CC---------CCCCCeE--------EecCCCh------------------HHHHHHHH---
Confidence 10 11000 0 00 0001101 0236664 56777776
Q ss_pred CCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEeccccc
Q 003466 613 GLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLT 692 (818)
Q Consensus 613 ~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLg 692 (818)
.+++++||||+||| |+++|+++|+++||++|+++|++||++||+||||||| |+|.+|+++++|++|||+||||+||
T Consensus 242 --~~~~~iAavI~Epv-~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lg 317 (474)
T PLN02482 242 --ANKGEIAAVILEPV-VGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIG 317 (474)
T ss_pred --hCCCceEEEEECCC-CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhh
Confidence 34678999999998 9999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred CCccccceeecchHHHhhccCChH--------------------------------------HHHHHHHHHHHcC--CCe
Q 003466 693 GGVIPLAATLATNAVFDSFVGDSK--------------------------------------LWDLELIQQISSH--RTV 732 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~l~~~~~--------------------------------------~~~~~l~~~l~~~--~~v 732 (818)
|| +|+||+++++++++.+..... .+.+.+.+...++ +.+
T Consensus 318 gG-~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~ 396 (474)
T PLN02482 318 GG-LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMC 396 (474)
T ss_pred CC-CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99 799999999999998752110 1112233333443 332
Q ss_pred -eEEEeeeeEEEEEEecCccc-----CCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 733 -QRVVALGTLCAIELQAAGCN-----AGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 733 -~~vrg~Gl~~~iel~~~~~~-----~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
.++++ |++++|..+... ...+...+..+.+.|+++||++.+.+...+ .||++||++|||+++++++++++
T Consensus 397 ~~~v~g---~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~~-~psl~ht~~dId~~l~al~~~l~ 472 (474)
T PLN02482 397 GGYISG---MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEAG-FTSLAHTEEDIDFTIAAAERVLA 472 (474)
T ss_pred Ecccce---EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCCC-cCCCCCCHHHHHHHHHHHHHHHH
Confidence 34444 889999764210 012334567789999999999988643222 49999999999999999999987
Q ss_pred H
Q 003466 807 E 807 (818)
Q Consensus 807 ~ 807 (818)
+
T Consensus 473 ~ 473 (474)
T PLN02482 473 R 473 (474)
T ss_pred h
Confidence 5
No 64
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=6.2e-55 Score=493.94 Aligned_cols=346 Identities=24% Similarity=0.293 Sum_probs=282.5
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||+ +||||+||+|++++||+ ||+|++|+++|++++.+... .+.++++.+|+++|++
T Consensus 21 ~~~~~~~~~G~--~~~d~dG~----~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~la~~l~~ 92 (406)
T PRK12381 21 APFIPVRGEGS--RLWDQQGK----EYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGN-GYTNEPVLRLAKKLID 92 (406)
T ss_pred CCceEEEeecC--EEEeCCCC----EEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccC-ccCCHHHHHHHHHHHh
Confidence 35688898887 79999999 99999999999999999 99999999999998765432 4568889999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
+.+ .++|+|++||+||||+|+|+| |.|+.+.+. ++|.+||+++++|||+|.+++++++.+.++.
T Consensus 93 ~~~---~~~v~~~~sGseA~e~Alk~a-r~~~~~~~~------------~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 156 (406)
T PRK12381 93 ATF---ADRVFFCNSGAEANEAALKLA-RKYAHDRYG------------SHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQ 156 (406)
T ss_pred hCC---CCeEEEcCCcHHHHHHHHHHH-HHHHhhcCC------------CCCCeEEEECCCcCCcchhHHhhcCCccccc
Confidence 875 479999999999999999999 777644332 4578999999999999999999998654443
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. .++. ++ +..+ ++|||. +.+++.+.
T Consensus 157 ~--------~~~~--~~------~~~~----------------~~~~d~------------------~~l~~~l~----- 181 (406)
T PRK12381 157 D--------FAPL--PP------DIRH----------------AAYNDL------------------NSASALID----- 181 (406)
T ss_pred C--------CCCC--CC------CeeE----------------eCCCCH------------------HHHHHhcc-----
Confidence 2 0100 01 1111 125553 45666553
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
++++|||+||+ +++||++++|++|+++|+++|++||++||+|||+|||||+|++|+++++++.||++||||+||||
T Consensus 182 ---~~~aaviiEPv-~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG 257 (406)
T PRK12381 182 ---DQTCAVIVEPI-QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALGGG 257 (406)
T ss_pred ---CCeeEEEEeCC-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhhCC
Confidence 47999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HH------------HHHHHHHH----HcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LW------------DLELIQQI----SSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~------------~~~l~~~l----~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... .+ .+.+.+.+ .+++.+.++||.|
T Consensus 258 -~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G 336 (406)
T PRK12381 258 -FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLG 336 (406)
T ss_pred -CceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCe
Confidence 799999999999987753211 01 01122222 3456678999999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~ 810 (818)
+|+++++..+. ...+..+.+.|+++||++.+.+ +.+||.||+++|++||++++++|+++++++..
T Consensus 337 l~~~~~l~~~~------~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 337 LLIGCVLNAEY------AGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred EEEEEEecCch------hhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999997531 1246678899999999998766 79999999999999999999999999987653
No 65
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=3.7e-56 Score=492.02 Aligned_cols=304 Identities=28% Similarity=0.411 Sum_probs=243.1
Q ss_pred EEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccC
Q 003466 378 VIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVG 457 (818)
Q Consensus 378 vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~ 457 (818)
+|++++|. |+||.||+ +||||++++|++++||+ ||+|.+|+++|++++.+.++....++...+|+++|.+.+|
T Consensus 1 ~i~~a~G~--~l~d~dG~----~~lD~~~~~~~~~lGh~-~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p 73 (339)
T PF00202_consen 1 FIERAEGA--YLWDVDGR----EYLDFMSGYGSVNLGHN-HPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFP 73 (339)
T ss_dssp EEEEEEBT--EEEETTSE----EEEESSHHHHTTTT-BT--HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSS
T ss_pred CeEEeecC--EEEECCCC----EEEECCCCccceecCCC-ccccchhHHHHhhhcccccccceeccchhhhhhhhhhccc
Confidence 47788887 79999999 99999999999999999 9999999999999998877667889999999999999997
Q ss_pred CCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCC
Q 003466 458 KGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQ 537 (818)
Q Consensus 458 ~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~ 537 (818)
.+ +++|+|++||+||||.|||+| |+|.+..+. ++|.+||+|+++|||+|.+++++++.+.++..+
T Consensus 74 ~~-~~~v~f~~sGseAve~Alkla-~~~~~~~~~------------~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~- 138 (339)
T PF00202_consen 74 GG-LDRVFFANSGSEAVEAALKLA-RQYHNKRAY------------TGRRKILAFEGSYHGRTLGALSLTGNPPYRKGF- 138 (339)
T ss_dssp TT-EEEEEEESSHHHHHHHHHHHH-HHHHHHTHH------------HTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTT-
T ss_pred cc-cceeeeccCchHHHHHHHHHh-hcccccccc------------cCCceEEEeeeeeeccCcccccccCCccccccc-
Confidence 54 789999999999999999999 544443332 668899999999999999999998876665531
Q ss_pred CCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCC
Q 003466 538 QPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVS 617 (818)
Q Consensus 538 ~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~ 617 (818)
.+++ .+..+++.|+... +.....+.+.+++.+.+ .++
T Consensus 139 ~~~~---------------~~~~~~p~~~~~~------------------------~~~~~~~~~~~~~~~~~----~~~ 175 (339)
T PF00202_consen 139 GPLY---------------PGVVFVPFPDPAA------------------------DEEEQACLNALEELIAA----LNA 175 (339)
T ss_dssp CSSS---------------TTEEEEETTCHHH------------------------HHHHHHHHHHHHHHHHH----HHG
T ss_pred cccc---------------cccccccCCccch------------------------hhhHHHHHHHHHHHHHh----hcC
Confidence 1111 1223445443321 01112223344444433 346
Q ss_pred CcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCccc
Q 003466 618 GCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVIP 697 (818)
Q Consensus 618 ~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~P 697 (818)
++|||||+||| |+++|++++|++||++|+++|++||++||+|||+|||||||++|+++++|++|||+|+||+|+|| +|
T Consensus 176 ~~iaavivEPi-~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG-~p 253 (339)
T PF00202_consen 176 DEIAAVIVEPI-QGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGG-LP 253 (339)
T ss_dssp GGEEEEEEESS-BTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTT-SS
T ss_pred CcEEEEEEecc-ccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccccchhhh-hh
Confidence 79999999997 99999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred cceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEeeeeEE
Q 003466 698 LAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVALGTLC 742 (818)
Q Consensus 698 lsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~Gl~~ 742 (818)
+||+++++++++.+..... .+.+.+.+..++++.+.+|||.|+|+
T Consensus 254 ~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~ 333 (339)
T PF00202_consen 254 ISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARYPLIGEVRGIGLMI 333 (339)
T ss_dssp EEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEETTEE
T ss_pred cccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeCeEE
Confidence 9999999999998854221 22233443335569999999999999
Q ss_pred EEEEec
Q 003466 743 AIELQA 748 (818)
Q Consensus 743 ~iel~~ 748 (818)
++++++
T Consensus 334 ~ie~~k 339 (339)
T PF00202_consen 334 GIELVK 339 (339)
T ss_dssp EEEESS
T ss_pred EEEEEC
Confidence 999963
No 66
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=6.8e-55 Score=496.61 Aligned_cols=357 Identities=18% Similarity=0.215 Sum_probs=268.7
Q ss_pred EEeecCCeeEEEeC-CcCccccceeecccccccccCCCCCCHHHH--HHHHHhhhhcccc--cCCCCCChhHHHHHHHHH
Q 003466 379 IDSRCGENFSVYQD-QKNKFIGQQFDACASWWTQGPDATLQIELA--RDMGYTAARFGHV--MFPENVYEPALECAELLL 453 (818)
Q Consensus 379 i~~~~G~~~~v~D~-dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~--eAi~~q~~~~~~~--~~~~~~~~~~~eLae~L~ 453 (818)
+++++|. |+||. ||| +||||++|+|+.++||+ ||+|+ +|+++|++++.+. +.....+++..+++++|+
T Consensus 23 ~~~a~G~--~l~D~~dG~----~ylD~~~g~~~~~lGh~-~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~ 95 (431)
T TIGR03251 23 LDRSRGS--VLVDARDGR----RYLDMFSFFASMALGMN-HPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFA 95 (431)
T ss_pred EEeccCC--EEEECCCCC----ChhhcccChhhcCCCCC-ChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHH
Confidence 5777776 79996 999 99999999999999999 99999 9999999987532 223466889999999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhc----ccccccccCCCccccccceEEEEEcCCCCCCccccccccCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFD----HEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAP 529 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~----~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~ 529 (818)
+.++.+.+++|+|+||||||||+|||+| |+||++ +|. ..++|.+||+|+++|||+|.+++++++.
T Consensus 96 ~~~~~~~~~~v~f~~sGsEAve~AlklA-r~~t~~~~~~~g~----------~~~~~~~ii~~~~~yHG~t~~als~~~~ 164 (431)
T TIGR03251 96 RVLGDPALPHLFFIEGGALAVENALKTA-FDWKSRHNQARGI----------PAALGTQVLHLRQAFHGRSGYTLSLTNT 164 (431)
T ss_pred HhcCCCCcCEEEEeCCcHHHHHHHHHHH-HHHhhcchhhcCC----------CCCCCceEEEECCccCCcchhhhhccCC
Confidence 9863333789999999999999999999 778754 232 0012678999999999999999999985
Q ss_pred CCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHh
Q 003466 530 SPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLL 609 (818)
Q Consensus 530 ~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~ 609 (818)
..++..+ .|. ++. .+++.|+.. + +++..+ . .+...+...+.+.+++.++
T Consensus 165 ~~~~~~~-~~~-------~~~---------~~~~~p~~~-~--------~~~~~~--~---~~~~~~~~~~l~~~~~~~~ 213 (431)
T TIGR03251 165 DPRKTAR-FPK-------FDW---------PRIDNPKLT-F--------PLDAPN--L---DQVIALEEEALRQARAAFA 213 (431)
T ss_pred ccccccC-CCC-------CCC---------ccCCCCccc-C--------Cccccc--c---chhhHHHHHHHHHHHHHHH
Confidence 4333210 010 000 011222110 0 010000 0 0011223344566777776
Q ss_pred cCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecc
Q 003466 610 QNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGK 689 (818)
Q Consensus 610 ~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK 689 (818)
.+++++||||+||| |++||++++|++||++|+++|++||++||+|||||||||||++|+++++|++|||+|+||
T Consensus 214 -----~~~~~iAavivEPv-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK 287 (431)
T TIGR03251 214 -----ERPHDIACFIAEPI-QGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGK 287 (431)
T ss_pred -----hCCCcEEEEEEecc-ccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecc
Confidence 35689999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccceeecchHH---Hh-hccCC---------hH---------------------------HHHHHHHHHHHcC
Q 003466 690 LLTGGVIPLAATLATNAV---FD-SFVGD---------SK---------------------------LWDLELIQQISSH 729 (818)
Q Consensus 690 gLggGy~PlsAvl~~~~i---~~-~l~~~---------~~---------------------------~~~~~l~~~l~~~ 729 (818)
++ |+++++.++++ ++ .+... .. .+.+.+.+..+++
T Consensus 288 ~~-----~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 362 (431)
T TIGR03251 288 KT-----QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEF 362 (431)
T ss_pred cC-----ccceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 96 56667777654 22 11100 00 1112222323457
Q ss_pred C-CeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHH
Q 003466 730 R-TVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 730 ~-~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
+ .+.++||.|+|+++++... ..+..+++.|+++||++.+.+ +++||+||+++|++|||+++++|++
T Consensus 363 ~~~i~~vrg~G~~~~i~~~~~--------~~~~~~~~~l~~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 363 PHLVSNPRGRGLMCAFDLPST--------ADRDEVIRQLYREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ccceecccccceeEEEEeCCH--------HHHHHHHHHHHhCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 7 7899999999999999533 346678999999999998876 8999999999999999999999875
No 67
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.4e-54 Score=492.76 Aligned_cols=349 Identities=21% Similarity=0.276 Sum_probs=271.8
Q ss_pred CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHH
Q 003466 374 EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 374 ~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
..|+++++++|. +|||.||| +|||+++|+|+.++||+ ||+|.+|+++|+++.... ...+++..+|+++|+
T Consensus 34 ~~p~~i~~a~G~--~l~D~dG~----~yiD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~---~~~~~~~~~la~~L~ 103 (433)
T PRK00615 34 ITPPIVSSASGD--IFIDSLGK----TFIDFCGSWGSLIHGHS-HPKICDAIQQGAERGTSY---GLTSEQEILFAEELF 103 (433)
T ss_pred CCCceEEEeeeC--EEEECCCC----EEEEcccchhccccCCC-CHHHHHHHHHHHHhCCCC---CCCCHHHHHHHHHHH
Confidence 357789998887 79999999 99999999999999999 999999999999986532 356899999999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc---cccccccCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT---LGAMEAQAPS 530 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t---~~als~tg~~ 530 (818)
+.+|.+ .++|+|++|||||||+|||+| |.||+| .+||+|+++|||+| .+++++++..
T Consensus 104 ~~~~~~-~~~v~f~~SGsEA~e~AiklA-r~~tgr------------------~~ii~~~~~yHG~td~~~~~~~~~~~~ 163 (433)
T PRK00615 104 SYLGLE-DHKIRFVSSGTEATMTAVRLA-RGITGR------------------SIIIKFLGCYHGHADTLLQGISFSETS 163 (433)
T ss_pred HhCCCC-cCEEEEeCchHHHHHHHHHHH-HHhhCC------------------CEEEEEcCccCCCCcccCcccccCCCC
Confidence 988743 479999999999999999999 888764 58999999999998 6777776532
Q ss_pred CCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhc
Q 003466 531 PYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQ 610 (818)
Q Consensus 531 ~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~ 610 (818)
..... . ..+ ..++. + ..+. ++|||. +.+++.|++
T Consensus 164 ~~~~~----~--~~~--~~~~~----~--~~~~--------------~~~~d~------------------~~l~~~l~~ 197 (433)
T PRK00615 164 LDTLT----H--LVD--TDLAH----P--LTLS--------------LPYNDF------------------QIFQTVMNS 197 (433)
T ss_pred cCcCC----C--CCC--CCCCC----C--CeEe--------------CCCCCH------------------HHHHHHHHh
Confidence 11100 0 000 00000 0 0011 225553 556777763
Q ss_pred CCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEeccc
Q 003466 611 NPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKL 690 (818)
Q Consensus 611 ~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKg 690 (818)
..+++||||+||| |+++|+++|+++||++|+++|++||++||+||||||| |+|.+|+++++|++|||+||||+
T Consensus 198 -----~~~~~aavI~Epv-~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~ 270 (433)
T PRK00615 198 -----LGHRVAGVIFEPI-CANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKI 270 (433)
T ss_pred -----cCCceEEEEECCC-CCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEccc
Confidence 3478999999998 9999999999999999999999999999999999999 99999999999999999999999
Q ss_pred ccCCccccceeecchHHHhhccCChH--------------------------------------HHHHHHHHHHHcCCC-
Q 003466 691 LTGGVIPLAATLATNAVFDSFVGDSK--------------------------------------LWDLELIQQISSHRT- 731 (818)
Q Consensus 691 LggGy~PlsAvl~~~~i~~~l~~~~~--------------------------------------~~~~~l~~~l~~~~~- 731 (818)
|||| +|+|++++++++++.+..... .+.+.+.+.+.+++.
T Consensus 271 lggG-~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~ 349 (433)
T PRK00615 271 LGGG-LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFP 349 (433)
T ss_pred ccCC-cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999 699999999999998743110 111222333344322
Q ss_pred eeEEEeeeeEEEEEEecCccc-C-C---CchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 732 VQRVVALGTLCAIELQAAGCN-A-G---YGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 732 v~~vrg~Gl~~~iel~~~~~~-~-~---~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+..+| .|+|++++|..+... . . .+......+.+.|+++||++.+....- ...+..||++|||+++++++++++
T Consensus 350 v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~-~~ls~~ht~~did~~~~a~~~~~~ 427 (433)
T PRK00615 350 VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEA-SFLSSAHSMENLDYAQNVLIDSLE 427 (433)
T ss_pred eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccc-cceecCCCHHHHHHHHHHHHHHHH
Confidence 77888 999999999865321 1 0 133456789999999999998753111 245778999999999999999987
Q ss_pred HH
Q 003466 807 EF 808 (818)
Q Consensus 807 ~l 808 (818)
.+
T Consensus 428 ~~ 429 (433)
T PRK00615 428 KV 429 (433)
T ss_pred HH
Confidence 65
No 68
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=1.6e-53 Score=490.38 Aligned_cols=351 Identities=22% Similarity=0.290 Sum_probs=283.0
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|+++++++|. |+||.||+ +||||+||+|+.++||+ ||+|++|+++|++++.+.+. .+.+++..+|+++|+++
T Consensus 58 p~~~~~a~G~--~l~d~dG~----~ylD~~sg~~~~~~Gh~-~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~la~~L~~~ 129 (474)
T PLN02624 58 PVVFSRAKGS--RIWDPEGK----KYLDFLSAYSAVNQGHC-HPKIIKALTEQAEKLTLSSR-AFYNDKFPEFAEYLTSM 129 (474)
T ss_pred CceEEeeeeC--EEEECCCC----EEEEcccchhcccCCCC-CHHHHHHHHHHHHhcCCccc-ccCCHHHHHHHHHHHhh
Confidence 5688898887 79999999 99999999999999999 99999999999999876653 46789999999999998
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhh-cccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSF-DHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~-~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
++ .++++|++||+||||+|||+| |.|+. ++|. .++|.+||++.++|||+|.+++++++...++.
T Consensus 130 ~~---~~~~~f~~SGseA~e~AlklA-r~~~~~~~g~-----------~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~ 194 (474)
T PLN02624 130 FG---YDMVLPMNTGAEGVETAIKLA-RKWGYEKKGI-----------PKNEAIIVSCCGCFHGRTLAAISMSCDNEATR 194 (474)
T ss_pred cC---CCeEEEeCChHHHHHHHHHHH-HHHHHhhcCC-----------CCCCcEEEEECCCcCCCCHHHhhcCCCccccc
Confidence 86 579999999999999999999 66542 2221 02467899999999999999999997553332
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. +++. .| +..+ ++|||. +.+++.++
T Consensus 195 ~--------~~~~--~~------~~~~----------------~~~~d~------------------~~l~~~l~----- 219 (474)
T PLN02624 195 G--------FGPL--LP------GHLK----------------VDFGDL------------------DALEKIFE----- 219 (474)
T ss_pred c--------CCCC--CC------CceE----------------eCCCCH------------------HHHHHHHH-----
Confidence 2 1111 01 1111 125553 55677775
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.++++++|||+||+ ++++|+++|+++||++|+++|++||++||+|||||||||+|++|+++++++.||++|+||++|||
T Consensus 220 ~~~~~iaaiiiEpv-~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG 298 (474)
T PLN02624 220 EDGDRIAAFLFEPI-QGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGG 298 (474)
T ss_pred hCCCCEEEEEECCc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCC
Confidence 24578999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HHH------------HHHHHHH----HcCC-CeeEEEee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LWD------------LELIQQI----SSHR-TVQRVVAL 738 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~~------------~~l~~~l----~~~~-~v~~vrg~ 738 (818)
++|+|++++++++++.+..... .+. +.+.+.+ .+++ .+.+++|.
T Consensus 299 ~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~ 378 (474)
T PLN02624 299 VIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGR 378 (474)
T ss_pred CCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEee
Confidence 9999999999998876542111 111 1122222 3456 47789999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
|+++++++..+. .....+..+++.|+++||++.|.+ +.|||.||+++|++||++++++|++++++-.
T Consensus 379 G~~~~i~l~~~~----~~~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~ 446 (474)
T PLN02624 379 GLLNAVVLNSPK----LGPVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEHDL 446 (474)
T ss_pred EEEEEEEecCCC----cChHHHHHHHHHHHhCCeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999996431 112356788999999999999864 8899999999999999999999999887654
No 69
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=3.8e-51 Score=461.55 Aligned_cols=339 Identities=20% Similarity=0.278 Sum_probs=274.6
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++.+.+. ...+++..+|+++|++
T Consensus 22 ~p~~~~~~~G~--~l~d~~G~----~~lD~~~g~~~~~lGh~-~p~v~~ai~~~~~~~~~~~~-~~~~~~~~~l~~~l~~ 93 (396)
T PRK04073 22 LPIVISEAEGV--WVKDPEGN----RYMDMLSAYSAVNQGHR-HPKIIQALKDQADKVTLTSR-AFHSDQLGPWYEKVAK 93 (396)
T ss_pred CCceEEeeeec--EEEECCCC----EEEEcCCCHHhccCCCC-CHHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHh
Confidence 46788888886 79999999 99999999999999999 99999999999999887543 3568899999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhc-ccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFD-HEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~-~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
+.+ .++++|++||+||||+|||+| |.|+.. .|. +++|.+||+++++|||+|.+++++++.+.++
T Consensus 94 ~~~---~~~~~~~~SGseA~e~Alk~a-~~~~~~~~g~-----------~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~ 158 (396)
T PRK04073 94 LTG---KDMVLPMNTGAEAVETAIKAA-RRWAYDVKGV-----------EPNKAEIIACEGNFHGRTMAAVSLSSEEEYK 158 (396)
T ss_pred cCC---CCeEEEcCChHHHHHHHHHHH-HHHhhhccCC-----------CCCCCEEEEECCCcCCCCHHHHhhcCCcccc
Confidence 876 379999999999999999999 666421 121 1456799999999999999999999755433
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
.. .++. .| +..++ +|||+ +.+++.+.
T Consensus 159 ~~--------~~~~--~~------~~~~~----------------~~~d~------------------~~l~~~i~---- 184 (396)
T PRK04073 159 RG--------FGPM--LP------GIKKI----------------PYGDL------------------EALKAAIT---- 184 (396)
T ss_pred cC--------CCCC--CC------CceEe----------------CCCCH------------------HHHHHhcc----
Confidence 21 0000 01 11111 24442 44555553
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
+++++||+||+ ++.+|.++++++|+++|+++|++||++||+|||++||||+|++++++++++.||++|+||++|+
T Consensus 185 ----~~~~~viiep~-~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~ 259 (396)
T PRK04073 185 ----PNTAAFLVEPI-QGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGG 259 (396)
T ss_pred ----cCeEEEEEcCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccC
Confidence 36899999998 9999999999999999999999999999999999999999999998899999999999999999
Q ss_pred CccccceeecchHHHhhccCChH-------------------HH------------HHHHHHHHHcC--CCeeEEEeeee
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK-------------------LW------------DLELIQQISSH--RTVQRVVALGT 740 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~-------------------~~------------~~~l~~~l~~~--~~v~~vrg~Gl 740 (818)
|++|+|++++++++++.+..... .+ .+.+.+.+++. +.+..+++.|+
T Consensus 260 gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~ 339 (396)
T PRK04073 260 GVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGL 339 (396)
T ss_pred CCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCcccceecceE
Confidence 88999999999999988743211 11 11233334333 45788999999
Q ss_pred EEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 741 LCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 741 ~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
++++++... +..++++|+++||++.+.+ +.+||+||+++|++||++++++|++++
T Consensus 340 ~~~~~~~~~----------~~~~~~~l~~~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 340 FIGVELNEP----------ARPYCEALKEEGLLCKETHETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEEEEecch----------HHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 999998532 4578899999999998765 799999999999999999999998875
No 70
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.6e-50 Score=455.28 Aligned_cols=339 Identities=22% Similarity=0.326 Sum_probs=277.8
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ++||.||| +||||+||+|++++||+ ||+|.+|+++|++++.+... .+.++.+.+|+++|++
T Consensus 13 ~~~~~~~~~G~--~~~d~dG~----~~lD~~~g~~~~~lGh~-~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~ 84 (389)
T PRK01278 13 ADLAFERGEGV--WLIDEDGE----RYLDFASGIAVNSLGHA-HPHLVEALKEQAEKLWHVSN-LYRIPEQERLAERLVE 84 (389)
T ss_pred CCceEEeeecC--EEEECCCC----EEEECCccHhhccCCCC-CHHHHHHHHHHHHhcCcccc-ccCChHHHHHHHHHHh
Confidence 46788898887 79999999 99999999999999999 99999999999998765442 3568999999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
..+ .++|+|++||+|||+.|+|+| |.|+...|+ ++|.+||+++++|||++.+++++++.+.++.
T Consensus 85 ~~~---~~~v~~~~sGseA~~~al~~a-r~~~~~~G~------------~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 148 (389)
T PRK01278 85 NSF---ADKVFFTNSGAEAVECAIKTA-RRYHYGKGH------------PERYRIITFEGAFHGRTLATIAAGGQEKYLE 148 (389)
T ss_pred hCC---CCEEEEcCCcHHHHHHHHHHH-HHHHHhcCC------------CCCCEEEEECCCcCCCcHHHHhccCChhhcc
Confidence 875 479999999999999999999 677655554 5678999999999999999999987654432
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
.+ . |. .++..+ ++|+|+ +.+++.+.
T Consensus 149 ~~------------~-~~---~~~~~~----------------~~~~d~------------------~~l~~~l~----- 173 (389)
T PRK01278 149 GF------------G-PL---VPGFDQ----------------VPFGDI------------------EALKAAIT----- 173 (389)
T ss_pred cC------------C-CC---CCCceE----------------eCCCCH------------------HHHHHhhC-----
Confidence 20 0 00 001111 124543 45666663
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++++||+||+ ++.+|+.++|++|+++|+++|++||++||+|||+|||||+|++++++++++.||++|+||++++|
T Consensus 174 ---~~~~avivep~-~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G 249 (389)
T PRK01278 174 ---PNTAAILIEPI-QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIGGG 249 (389)
T ss_pred ---CCeEEEEEecc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhccCC
Confidence 37999999998 99999999999999999999999999999999999999999999988999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HHH------------HHHHHH----HHcCC-CeeEEEee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LWD------------LELIQQ----ISSHR-TVQRVVAL 738 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~~------------~~l~~~----l~~~~-~v~~vrg~ 738 (818)
+|+|++++++++++.+..... .++ +.+.+. ...++ .+.++++.
T Consensus 250 -~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~ 328 (389)
T PRK01278 250 -FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGK 328 (389)
T ss_pred -cceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecc
Confidence 799999999999887753211 110 111222 23466 67889999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
|+++++++..+ +..+++.|+++||++.|.+ +.+||.||+++++++|++++++|++++++
T Consensus 329 G~~~~i~~~~~----------~~~~~~~l~~~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 329 GLLLGLKCVVP----------NRDLVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred cEEEEEEEecC----------HHHHHHHHHHCCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999988543 4578999999999999875 89999999999999999999999998865
No 71
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=7.7e-52 Score=424.66 Aligned_cols=370 Identities=19% Similarity=0.272 Sum_probs=299.0
Q ss_pred CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHH
Q 003466 374 EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 374 ~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
..|+.|++++|. |++|.+|+ +||||++. +...||+ ||+|++|...|++..... ..+.|....+.|+.|.
T Consensus 28 sDP~kivRaq~Q--YmfDE~g~----~yLDCInN--VaHvghc-hp~VV~A~~kQmat~~tN--~RFlhd~lv~cA~~l~ 96 (452)
T KOG1403|consen 28 SDPLKIVRAQGQ--YMFDEEGT----RYLDCINN--VAHVGHC-HPEVVRAGAKQMATISTN--NRFLHDELVQCARTLT 96 (452)
T ss_pred CCchhhehhccc--eeeccCcc----cHHHHhhh--hhhcccC-CHHHHHHHHHHHhHhccc--chhhHHHHHHHHHHHh
Confidence 567888999998 69999999 99999984 4467999 999999999999986542 3467888999999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
..+|. ++.++|+|||||||+.|||+| |.||++ .++|+++.+|||+....|-++-.++..
T Consensus 97 stlPe--Lsvc~F~NSGSEANDLALRLA-R~ftkh------------------qDvItldHAYHGHl~s~mE~SPYKF~~ 155 (452)
T KOG1403|consen 97 STLPE--LSVCFFVNSGSEANDLALRLA-RNFTKH------------------QDVITLDHAYHGHLQSVMEVSPYKFNQ 155 (452)
T ss_pred hcCCC--ceEEEEecCCchhhHHHHHHH-Hhhccc------------------CceEEEechhccceeeeeeccceeccC
Confidence 98875 899999999999999999999 888775 489999999999987777776322111
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
. . ...-| +-++..|.|+.|+... .+. ..+.......|.+.+++++++..
T Consensus 156 g-----~------~v~kp-----d~VHVAPcPDvyrGK~--------r~~------~~~~a~~~~~Yad~vk~I~~d~~- 204 (452)
T KOG1403|consen 156 G-----G------GVAKP-----DYVHVAPCPDVYRGKF--------RDK------MYPDADMGALYADPVKEICQDQL- 204 (452)
T ss_pred C-----C------CcCCC-----ceeEecCCcccccccc--------ccc------cCCcccchhhhhhHHHHHHHHHH-
Confidence 1 0 11111 1234557888886432 110 01112233456677777766421
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc-cchhcccCCCCcEEEeccccc
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-ETTADLLGCVPDIACYGKLLT 692 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~~a~e~~gv~PDivtlgKgLg 692 (818)
..+..+||+|.|.. |+-||-+.||.+|++.+.+..+.+|-++|+||||+||||.|+ +|+++.|++.|||+|+||.+|
T Consensus 205 -~~g~gvAAfiAEsl-QSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG 282 (452)
T KOG1403|consen 205 -AKGQGVAAFIAESL-QSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG 282 (452)
T ss_pred -hcCCcHHHHHHHHH-HhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC
Confidence 34567999999998 999999999999999999999999999999999999999998 899999999999999999999
Q ss_pred CCccccceeecchHHHhhccCChH-------------------------------------HHHHHHHHHHHcCCCeeEE
Q 003466 693 GGVIPLAATLATNAVFDSFVGDSK-------------------------------------LWDLELIQQISSHRTVQRV 735 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~l~~~~~-------------------------------------~~~~~l~~~l~~~~~v~~v 735 (818)
+| .|+++|+.+++|.+.|...+. .+..-|.+...+|++|++|
T Consensus 283 NG-hPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv 361 (452)
T KOG1403|consen 283 NG-HPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDV 361 (452)
T ss_pred CC-CeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceecc
Confidence 99 799999999999998865322 1111223334689999999
Q ss_pred EeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhC-CceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 736 VALGTLCAIELQAAGCNAGYGSLYAASLLKKLRED-GVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 736 rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~-Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
||.|+++||+++.+...+.|+...|..+..+|++. ||++... .|.+.|.||++++++++++++..|+++|.-++
T Consensus 362 RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT~me 439 (452)
T KOG1403|consen 362 RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILTVME 439 (452)
T ss_pred ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHHHHH
Confidence 99999999999999777788888888888899865 7999864 49999999999999999999999999998655
No 72
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=5.8e-50 Score=455.93 Aligned_cols=363 Identities=24% Similarity=0.320 Sum_probs=287.6
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|.++++++|. ++||.||+ +||||++|+|+.++||+ ||+|.+|+++|++++.+..+....+++..+|+++|++
T Consensus 23 ~p~~~~~~~G~--~l~d~dG~----~~lD~~~g~~~~~lGh~-~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~ 95 (425)
T PRK08088 23 HPIFADRAENC--RVWDVEGR----EYLDFAGGIAVLNTGHL-HPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQ 95 (425)
T ss_pred CCceEEeeeeC--EEEeCCCC----EEEEcCCchhhcCCCCC-CHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHH
Confidence 36688898886 79999999 99999999999999999 9999999999999987655444558899999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC-CC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP-YT 533 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~-~~ 533 (818)
..|.+..++++|++||+||||.|||+| |.++++ .+||+|+++|||+|.+++++++... ++
T Consensus 96 ~~~~~~~~~~~f~~sGsea~e~Alkla-r~~~~r------------------~~iv~~~~~yHG~~~~~~~~~~~~~~~~ 156 (425)
T PRK08088 96 KVPGDFAKKTLLVTTGSEAVENAVKIA-RAATKR------------------SGVIAFTGAYHGRTHYTLALTGKVNPYS 156 (425)
T ss_pred hCCCCCCCEEEEeCCcHHHHHHHHHHH-HHHhCC------------------CeEEEECCccCCccHHHHHhhCCCCccc
Confidence 877543469999999999999999999 777653 4899999999999999999986421 22
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
. +.+.. + .+..++++|..+ ++. . ...+.+.+++.+++.
T Consensus 157 ~--------~~~~~--~------~~~~~~~~p~~~------------~~~-----------~-~~~~~~~l~~~l~~~-- 194 (425)
T PRK08088 157 A--------GMGLM--P------GHVYRALYPCPL------------HGV-----------S-EDDAIASIERIFKND-- 194 (425)
T ss_pred c--------CCCCC--C------CCcEEcCCCccc------------cCc-----------c-HHHHHHHHHHHHHhc--
Confidence 1 11111 1 112233344322 111 0 112245677777521
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
.++++++|||+||+ ++++|+++++++|+++|+++|++||+++|+|||+|||||+|++++++++++.|||.+|||+|++
T Consensus 195 -~~~~~~aavi~Epi-~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~ 272 (425)
T PRK08088 195 -AAPEDIAAIIIEPV-QGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAG 272 (425)
T ss_pred -cCCCceEEEEECcc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccC
Confidence 23578999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEee
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVAL 738 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~ 738 (818)
| +|+|++++++++++.+..... .+.+.+.+....+|.+..++|.
T Consensus 273 G-~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~ 351 (425)
T PRK08088 273 G-FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL 351 (425)
T ss_pred C-CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc
Confidence 9 799999999999987753221 1111222333557888999999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
|+++.+++..+.....++...+..+.+.|+++||++.+. ++.+|+.||+++|++||++.+++|++++.++
T Consensus 352 G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 352 GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 999999996542222233456788999999999988764 3899999999999999999999999998754
No 73
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=8.5e-50 Score=454.51 Aligned_cols=350 Identities=19% Similarity=0.264 Sum_probs=273.3
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ++||.||+ +|||+++|+|+.++||+ ||+|++|+++|+++..+ ....++...+|+++|++
T Consensus 32 ~~~~~~~a~G~--~l~d~dG~----~~lD~~~g~~~~~lGh~-~p~i~~a~~~~~~~~~~---~~~~~~~~~~la~~L~~ 101 (426)
T PRK00062 32 TPRFIERAKGA--YLYDVDGN----EYIDYVGSWGPMILGHA-HPEVVEAVIEAAEKGLS---FGAPTELEVELAELVIE 101 (426)
T ss_pred CCeEEEeCcCC--EEEeCCCC----EEEEcccchhhhhcCCC-CHHHHHHHHHHHHhCCc---CCCCCHHHHHHHHHHHH
Confidence 36788898887 79999999 99999999999999999 99999999999998432 23568889999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.++. .++|+|++||+||||+|+|+| |.++++ .+||+|+++|||+|.++.+.++......
T Consensus 102 ~~~~--~~~v~~~~sGseA~e~Aik~a-~~~~g~------------------~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 160 (426)
T PRK00062 102 LVPS--IEMVRMVNSGTEATMSAIRLA-RGYTGR------------------DKIIKFEGCYHGHADSLLVKAGSGAATL 160 (426)
T ss_pred hCCC--CCEEEEecCHHHHHHHHHHHH-HHHhCC------------------CeEEEEcCccCCchhhhhhccCcccccc
Confidence 8763 579999999999999999999 667543 5899999999999988887765332111
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. .++... .+.+ + .|..++ ++|||. +.+++.++.
T Consensus 161 ~--~~~~~~----~~~~----------~-~~~~~~--------~~~~d~------------------~~l~~~i~~---- 193 (426)
T PRK00062 161 G--LPDSPG----VPED----------F-AKHTLT--------APYNDL------------------EAVEELFEE---- 193 (426)
T ss_pred C--CCCCCC----CCcc----------c-ccceEE--------cCCCCH------------------HHHHHHHHh----
Confidence 0 111000 0000 0 010110 124543 556666752
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.++++++||+||+ ++++|+++++++||++|+++|++||+++|+||||||| |+|.+|+++++++.|||+++||+++||
T Consensus 194 -~~~~~aaiivEpv-~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G 270 (426)
T PRK00062 194 -YGDEIAAVIVEPV-AGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGG 270 (426)
T ss_pred -CCCcEEEEEEeCC-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCC
Confidence 3578999999998 9999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH--------------------------------------HHHHHHHHHHHcCCCeeEEE
Q 003466 695 VIPLAATLATNAVFDSFVGDSK--------------------------------------LWDLELIQQISSHRTVQRVV 736 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~--------------------------------------~~~~~l~~~l~~~~~v~~vr 736 (818)
+|+|++++++++++.+..... .+.+.+.+..++++.+.++|
T Consensus 271 -~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vr 349 (426)
T PRK00062 271 -LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVN 349 (426)
T ss_pred -CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEE
Confidence 799999999999997742110 11112223334578888999
Q ss_pred eeeeEEEEEEecCccc-----CCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 737 ALGTLCAIELQAAGCN-----AGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 737 g~Gl~~~iel~~~~~~-----~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
|.|+|+++++..+... ..++...+..+.+.|+++||++.+.+ +.+++ ++++|++||++++++|+++++++
T Consensus 350 g~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 350 RVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEAGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred EecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCcCceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999754211 11233456789999999999999865 55554 58999999999999999998764
No 74
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=2.6e-49 Score=447.64 Aligned_cols=344 Identities=22% Similarity=0.313 Sum_probs=277.2
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++.+++|. ++||.||+ +||||+||+|+.+|||+ ||+|.+|+.+|++++.+... .+.++++.+|+++|++
T Consensus 22 ~~~~~~~~~G~--~~~d~dG~----~~iD~~~~~~~~~lGh~-~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~ 93 (403)
T PRK05093 22 AEFIPVRGEGS--RVWDQQGK----EYIDFAGGIAVTALGHC-HPALVKALKEQGEKLWHISN-VFTNEPALRLAKKLID 93 (403)
T ss_pred CCeeEEEeecC--EEEeCCCC----EEEEcCcCHHhccCCCC-CHHHHHHHHHHHHhcCcccC-ccCCHHHHHHHHHHHh
Confidence 35688898887 79999999 99999999999999999 99999999999998665432 2467889999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
+.+ .++++|++||+||||+|+|+| |.|+.+.+. .+|.+||+++++|||+|.+++++++.+.++.
T Consensus 94 ~~~---~~~~~~~~sGseA~e~a~kla-r~~~~~~~~------------~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~ 157 (403)
T PRK05093 94 ATF---AERVFFANSGAEANEAAFKLA-RRYACDRHG------------PEKTEIIAFHNSFHGRTLFTVSVGGQPKYSD 157 (403)
T ss_pred hCC---CCEEEEeCchHHHHHHHHHHH-HHHHhhcCC------------CCCCeEEEEcCCcCCchhhhHhhcCChhhhh
Confidence 875 479999999999999999999 777654322 4578999999999999999999887543322
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. + .+. + .+..+ ++|||. +.+++.+.
T Consensus 158 ~----~----~~~---~-----~~~~~----------------~~~~d~------------------~~l~~~l~----- 182 (403)
T PRK05093 158 G----F----GPK---P-----ADITH----------------VPFNDL------------------AAVKAVID----- 182 (403)
T ss_pred c----C----CCC---C-----CCcEE----------------eCCCCH------------------HHHHHHhc-----
Confidence 1 0 000 0 01111 225653 45666553
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++++||+||+ +++||+.+++++|+++|+++|++||+++|+|||++||||+|++++++++++.|||++|||++++|
T Consensus 183 ---~~~aaiiiep~-~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G 258 (403)
T PRK05093 183 ---DHTCAVVVEPI-QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALGGG 258 (403)
T ss_pred ---CCeEEEEEecc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecccccCC
Confidence 36899999998 99999999999999999999999999999999999999999988888999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HH------------HHHHHHHHHc----CCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LW------------DLELIQQISS----HRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~------------~~~l~~~l~~----~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... .+ .+.+.+.|++ ++.+..+++.|
T Consensus 259 -~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G 337 (403)
T PRK05093 259 -FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMG 337 (403)
T ss_pred -cceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCc
Confidence 799999999999887753211 00 0112333332 45567899999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+++++++.... ...+..++..|+++||++.+.+ +.+|+.|++++++++|++++++|++++.++
T Consensus 338 ~~~~~~l~~~~------~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 338 LLIGAELKPQY------KGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred eEEEEEecCcc------hhHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999996431 0246678999999999999866 899999999999999999999999988654
No 75
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=1.9e-49 Score=451.42 Aligned_cols=350 Identities=18% Similarity=0.265 Sum_probs=272.9
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|.++++++|. ++||.||| +|||+.+|+|+.++||+ ||+|++|+++|+++..+. ...++...+|+++|++
T Consensus 30 ~p~~~~~~~G~--~l~d~dG~----~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~---~~~~~~~~~lae~l~~ 99 (423)
T TIGR00713 30 TPFFVARGKGA--YLYDVDGN----EYIDYVLSWGPLILGHA-HPRVVEAVKEALERGTSY---GAPTEAEILLAKEIIS 99 (423)
T ss_pred CCeeEEeccCC--EEEeCCCC----EEEEccccccccccCCC-CHHHHHHHHHHHHhCCcC---CCCCHHHHHHHHHHHH
Confidence 47788898886 79999999 99999999999999999 999999999999986532 3467889999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
..+. .++|+|++||+||||+|+|+| |.|+++ .+||+++++|||.+..++++++......
T Consensus 100 ~~~~--~~~v~~~~sGseA~e~Alk~a-r~~~gr------------------~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 158 (423)
T TIGR00713 100 RVPS--VEMVRFVNSGTEATMSAVRLA-RGYTGR------------------DKIIKFEGCYHGHHDALLVKAGSGAATL 158 (423)
T ss_pred hCCc--ccEEEEeCCHHHHHHHHHHHH-HHhhCC------------------CEEEEEcCCCCCChhhhhccccCccccc
Confidence 8864 379999999999999999999 777653 5899999999999887777665321111
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
..++... + +. ...|..++ ++|||+ +.+++.+.+
T Consensus 159 --~~~~~~~----~--~~---------~~~~~~~~--------~~~~d~------------------~~l~~~i~~---- 191 (423)
T TIGR00713 159 --GLPTSPG----V--PE---------DFAKLTLV--------LPYNDL------------------EALEEVFEE---- 191 (423)
T ss_pred --CCCCCCC----C--Cc---------ccccceEE--------eCCCCH------------------HHHHHHHHH----
Confidence 0111100 0 00 00011110 124443 566777763
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.+++++|||+||+ ++++|+++++++|+++|+++|++||++||+|||+||| |+|.+|+++++++.||++||||++++|
T Consensus 192 -~~~~~aavi~ep~-~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G 268 (423)
T TIGR00713 192 -YGEEIAGVIVEPV-AGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG 268 (423)
T ss_pred -cCCcEEEEEEeCC-CCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCC
Confidence 3578999999998 8999999988999999999999999999999999999 999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCCh------H--------------------------------HHHHHHHHHHHcCCCeeEEE
Q 003466 695 VIPLAATLATNAVFDSFVGDS------K--------------------------------LWDLELIQQISSHRTVQRVV 736 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~------~--------------------------------~~~~~l~~~l~~~~~v~~vr 736 (818)
+|+|++++++++++.+.... . .+.+.+.+.+++++.+.++|
T Consensus 269 -~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~ 347 (423)
T TIGR00713 269 -LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVN 347 (423)
T ss_pred -CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 79999999999998875211 0 11112333445678888999
Q ss_pred eeeeEEEEEEecCccc-----CCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 737 ALGTLCAIELQAAGCN-----AGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 737 g~Gl~~~iel~~~~~~-----~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+.|+|+++++..+... ..++...+..+++.|+++||++.+.+ +.++++|+ +|++||++++++|+++++++
T Consensus 348 ~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 348 RVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred eeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCccceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 9999999999754211 01123345678899999999998754 67888887 89999999999999998653
No 76
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=2.4e-49 Score=447.61 Aligned_cols=346 Identities=22% Similarity=0.299 Sum_probs=279.0
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|.++++++|. ++||.||+ +||||+|++++.++||+ ||+|++|+++|++++++.+. ...+++..+|+++|+++
T Consensus 20 ~~~~~~~~g~--~~~~~~g~----~~lD~~s~~~~~~~Gh~-~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~ 91 (401)
T TIGR01885 20 PVVFSKAEGV--HVWDVEGK----RYLDFLSAYSAVNQGHC-HPKIVKALTEQAQKLTLSSR-AFYNDVFGEFAEYVTKL 91 (401)
T ss_pred CceEEeeecC--EEEeCCCC----EEEEcccCHhhccCCCC-CHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHhh
Confidence 5577888887 69999999 99999999999999999 99999999999999876543 24688999999999999
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcc-cccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDH-EVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~-G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
++ .++++|++||+||||+|||+| |.++.+. |. .+++.+|++++++|||+|.+++++++.+.+..
T Consensus 92 ~~---~~~~~~~~SGs~A~e~ai~~a-~~~~~~~~~~-----------~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~ 156 (401)
T TIGR01885 92 FG---YDKVLPMNTGAEAVETAIKLA-RKWGYKVKGI-----------PENQAIIVSAKGNFHGRTLGAISMSTDPDSRT 156 (401)
T ss_pred cC---CCEEEEeCccHHHHHHHHHHH-HHHhhhhcCC-----------CCCCCEEEEECCCcCcccHHHHhCcCCccccc
Confidence 86 479999999999999999999 6665322 21 13468999999999999999999987543322
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. + +.. .| +..+ ++|||+ +.+++.|+.
T Consensus 157 ~-----~---~~~--~~------~~~~----------------~~~~d~------------------~~le~~l~~---- 182 (401)
T TIGR01885 157 N-----F---GPY--VP------GFKK----------------IPYNNL------------------EALEEALED---- 182 (401)
T ss_pred c-----c---CCC--CC------CceE----------------eCCCCH------------------HHHHHHHHh----
Confidence 1 0 100 01 1111 125553 567777763
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.++++++||+||+ ++++|++.++++|+++|+++|++||+++|+|||+|||||+|++++++++++.||++|+||+++||
T Consensus 183 -~~~~~~avi~E~v-~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g 260 (401)
T TIGR01885 183 -HGPNVCAFIVEPI-QGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLGKALSGG 260 (401)
T ss_pred -cCCCEEEEEEeCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEeeccccCC
Confidence 3468999999998 99999999999999999999999999999999999999999999888899999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HHH------------HHHHHHHHcC--CCeeEEEeeeeE
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LWD------------LELIQQISSH--RTVQRVVALGTL 741 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~~------------~~l~~~l~~~--~~v~~vrg~Gl~ 741 (818)
++|+|++++++++++.+..... .+. +.+.+.+++. +.+..++|.|+|
T Consensus 261 ~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~ 340 (401)
T TIGR01885 261 VYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLL 340 (401)
T ss_pred CCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhccCCceeEEeecCee
Confidence 8899999999999987754111 111 1233344444 566889999999
Q ss_pred EEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 742 CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 742 ~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+++++..+.. ...+..+++.|+++||++.|.+ +.+||.||+++|++||++++++|++++
T Consensus 341 ~~i~~~~~~~-----~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 341 NAIVIDESKT-----GRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred EEEEeccCcc-----hhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 9999864310 1246789999999999999865 899999999999999999999998876
No 77
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=7.9e-48 Score=438.63 Aligned_cols=336 Identities=19% Similarity=0.228 Sum_probs=249.9
Q ss_pred CCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHH
Q 003466 374 EAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLL 453 (818)
Q Consensus 374 ~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~ 453 (818)
..|+++++++|. |+||.||| +||||++|+|+.++||+ ||+|++|+++|++++... ...++...+|+++|+
T Consensus 29 ~~p~~~~~~~G~--~l~D~dG~----~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~---~~~~~~~~~la~~l~ 98 (431)
T PRK06209 29 LAPGFIQRGSGA--HVWDVDGN----EYIEYGMGLRAVGLGHA-YPPVVEAVREALQDGCNF---TRPSAIELDAAESFL 98 (431)
T ss_pred CCCeEEEeccCC--EEEeCCCC----EEEEccccccchhcCCC-CHHHHHHHHHHHHhCcCC---CCCCHHHHHHHHHHH
Confidence 457888998886 79999999 99999999999999999 999999999999987532 234556678999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEE-cCCCCCCccccccccCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLAL-KGSYHGDTLGAMEAQAPSPY 532 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~-~~sYHG~t~~als~tg~~~~ 532 (818)
+.+|. .++|+|++|||||||+|||+| |+||+| .+|+.+ .++|||........+...
T Consensus 99 ~~~p~--~~~v~f~~sGseA~e~AlklA-r~~tgr------------------~~i~~~~~~~~h~~~~~~~g~~~~~-- 155 (431)
T PRK06209 99 ELIDG--ADMVKFCKNGSDATSAAVRLA-RAYTGR------------------DLVARCADHPFFSTDDWFIGTTPMS-- 155 (431)
T ss_pred HhCCc--cceEEEecCHHHHHHHHHHHH-HHHhCC------------------CeEEEeccCccccccccccccCCCC--
Confidence 98864 579999999999999999999 888764 488998 788887321111000000
Q ss_pred CCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCC
Q 003466 533 TGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNP 612 (818)
Q Consensus 533 ~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~ 612 (818)
. + .|. .. +..+.. ++|||+ +.+++.|+
T Consensus 156 -~----------~----~~~-----~~--~~~~~~----------~~~~d~------------------~~l~~~l~--- 182 (431)
T PRK06209 156 -A----------G----IPA-----SV--SALTVT----------FRYNDI------------------ASLEALFE--- 182 (431)
T ss_pred -C----------C----CCh-----hH--hccccc----------cCCCCH------------------HHHHHHHH---
Confidence 0 0 000 00 000111 225653 56777776
Q ss_pred CCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEeccccc
Q 003466 613 GLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLT 692 (818)
Q Consensus 613 ~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLg 692 (818)
.+++++||||+||+ +++ .+|++||++|+++|++||++||+|||||||++++ ++..+++|+.|||+|+||+||
T Consensus 183 --~~~~~~aavi~Epv-~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-~g~~~~~gv~PDi~t~gK~lg 254 (431)
T PRK06209 183 --DHPGRIACVILEPA-TAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-RGAQKLYGIVPDLSCFGKALG 254 (431)
T ss_pred --hCCCCEEEEEEccc-cCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-chhhHHhCCCcceeeehhhhc
Confidence 34578999999998 775 7799999999999999999999999999998753 344456899999999999999
Q ss_pred CCccccceeecchHHHhh--cc----CC----hH---------------------------------HHHHHHHHHHHcC
Q 003466 693 GGVIPLAATLATNAVFDS--FV----GD----SK---------------------------------LWDLELIQQISSH 729 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~--l~----~~----~~---------------------------------~~~~~l~~~l~~~ 729 (818)
|| +|+|++++++++++. +. .. +. ++.+.+.+...++
T Consensus 255 gG-~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~ 333 (431)
T PRK06209 255 NG-FAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEH 333 (431)
T ss_pred CC-cccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99 699999999999986 31 11 00 1111222223457
Q ss_pred CCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 730 RTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 730 ~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+.+.++|+.|.++++++........+.......+.+.|+++||++.| +..+..||++||++++++++++++++.
T Consensus 334 ~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~------l~is~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 334 GLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS------LVVSYAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred CCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccccc------ccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999998743211122333445788999999998743 334457799999999999999999885
Q ss_pred H
Q 003466 810 K 810 (818)
Q Consensus 810 ~ 810 (818)
+
T Consensus 408 ~ 408 (431)
T PRK06209 408 K 408 (431)
T ss_pred H
Confidence 4
No 78
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=430.05 Aligned_cols=331 Identities=24% Similarity=0.302 Sum_probs=268.8
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ++||.||+ +||||+|++|+.+|||+ ||+|++|+++|++++.+.+ ..+.++...+|+++|.+
T Consensus 11 ~~~~~~~~~G~--~~~d~~G~----~~lD~~s~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~ 82 (377)
T PRK02936 11 FPIDIVKGKGT--KVTDNNGK----TYLDFTSGIAVCNLGHC-HPTVTKAVQEQLDDIWHVS-NLFTNSLQEEVASLLAE 82 (377)
T ss_pred CCceEEEeecC--EEEeCCCC----EEEECCcchhhccCCCC-CHHHHHHHHHHHHhccccc-cccCCHHHHHHHHHHHh
Confidence 45688898887 69999999 99999999999999999 9999999999999875543 23458889999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
..+ .++++|++||+|||++|+|+| |.+++ +.+||+++++|||++++++++++...++.
T Consensus 83 ~~~---~~~~~~~~sG~~a~~~A~~~a-~~~~g------------------~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~ 140 (377)
T PRK02936 83 NSA---GDLVFFCNSGAEANEAALKLA-RKHTG------------------KSKIVTFEQSFHGRTFGTMSATGQEKIKE 140 (377)
T ss_pred cCC---CCEEEEeCCcHHHHHHHHHHH-HHhcC------------------CCeEEEECCCcCCCcHHhhhccCCccccc
Confidence 775 368999999999999999999 66654 35899999999999999999887544332
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. .++.. + +..+ ++|||+ +.+++.+.
T Consensus 141 ~--------~~~~~--~------~~~~----------------~~~~d~------------------~~l~~~~~----- 165 (377)
T PRK02936 141 G--------FGPLL--P------GFTH----------------VPFNDI------------------KALKEVMN----- 165 (377)
T ss_pred c--------CCCCC--C------CceE----------------eCCCCH------------------HHHHHhcc-----
Confidence 2 00000 0 1111 124543 45666553
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++++||+||+ ++++|+.+++++|+++|+++|++||+++|+|||+|||||+|++++++++++.||++|+||++++|
T Consensus 166 ---~~~~~ii~e~i-~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G 241 (377)
T PRK02936 166 ---EEVAAVMLEVV-QGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLGNG 241 (377)
T ss_pred ---CCeEEEEEecc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcccccCC
Confidence 46899999998 99999999999999999999999999999999999999999988888899999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HH------------HHHHHHH----HHcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LW------------DLELIQQ----ISSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~------------~~~l~~~----l~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... .+ .+.+.+. +..++.+..+++.|
T Consensus 242 -~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 320 (377)
T PRK02936 242 -IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKG 320 (377)
T ss_pred -CccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecc
Confidence 799999999999988753211 00 0112222 33467788899999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+++.+++..+ +..+.+.|.++||++.+.+ +.+||.||+.+++++|++++++|++++
T Consensus 321 ~~~~i~~~~~----------~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 321 LMIGIECTEE----------VAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred eEEEEEecch----------HHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 9999998642 4568889999999999876 899999999999999999999998763
No 79
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-47 Score=432.34 Aligned_cols=338 Identities=22% Similarity=0.261 Sum_probs=275.2
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ++||.||| +||||.+|+|++++||+ ||+|.+|+++|++++++.. ..+.++...+|+++|++
T Consensus 25 ~~~~~~~~~G~--~~~d~dg~----~~lD~~s~~~~~~lG~~-~p~v~~ai~~~~~~~~~~~-~~~~~~~~~~la~~l~~ 96 (398)
T PRK03244 25 PPLALVRGEGA--VVWDVDGK----EYLDLLGGIAVNALGHA-HPAVVEAVTRQLATLGHVS-NLFATEPQIALAERLVE 96 (398)
T ss_pred CCceEEEeeec--EEEECCCC----EEEECCcCHhhccCCCC-CHHHHHHHHHHHHhccCcc-CccCCHHHHHHHHHHHH
Confidence 46788888886 79999999 99999999999999999 9999999999999987643 23567888999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.++....++++|++||+||++.|+|++ +. ++ |.+||.++++|||++.+++++++...+..
T Consensus 97 ~~~~~~~~~v~~~~sgsea~~~al~~~-~~-~g------------------~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 156 (398)
T PRK03244 97 LLGAPEGGRVFFCNSGAEANEAAFKLA-RL-TG------------------RTKIVAAEGGFHGRTMGALALTGQPAKRA 156 (398)
T ss_pred hCCCCCCCEEEEeCchHHHHHHHHHHH-HH-HC------------------CCeEEEECCCcCCccHHHHhccCCccccc
Confidence 877432469999999999999999999 43 22 35899999999999999998887543322
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. + .+ +. .+... + +|+|. +.+++.+.
T Consensus 157 ~----~-~~----~~-------~~~~~--~--------------~~~d~------------------~~l~~~~~----- 181 (398)
T PRK03244 157 P----F-EP----LP-------GGVEH--V--------------PYGDV------------------DALAAAVD----- 181 (398)
T ss_pred C----C-CC----CC-------CCceE--e--------------CCCCH------------------HHHHHhhc-----
Confidence 1 0 00 00 00111 1 13442 44555552
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++++|++||+ |+.+|+++|+++|+++|+++|++||++||+|||+|||||+|++|+++++++.||++||||+|++|
T Consensus 182 ---~~~~aviiep~-~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G 257 (398)
T PRK03244 182 ---DDTAAVFLEPI-QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLGGG 257 (398)
T ss_pred ---CCeEEEEEecc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhhCC
Confidence 47899999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------------------HHHHHHHHHHHc--CCCeeEEEeeeeE
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------------------LWDLELIQQISS--HRTVQRVVALGTL 741 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------------------~~~~~l~~~l~~--~~~v~~vrg~Gl~ 741 (818)
+|+|++++++++++.+..... .+.+.+.+.++. ++.+..++|.|++
T Consensus 258 -~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~ 336 (398)
T PRK03244 258 -LPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLL 336 (398)
T ss_pred -cccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEE
Confidence 799999999999987754211 011224455554 5667889999999
Q ss_pred EEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 742 CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 742 ~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+++++..+ .+..+.+.|+++||++.+.+ +.||++||+.+|++||++++++|++++.+++
T Consensus 337 ~~i~~~~~---------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 337 LGIVLTAP---------VAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred EEEEEecc---------HHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 99999532 35678899999999999865 8999999999999999999999999997754
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=6.2e-47 Score=427.61 Aligned_cols=342 Identities=19% Similarity=0.267 Sum_probs=273.5
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhc
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQG 455 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~ 455 (818)
|.++++++|. |+||.||+ +|||+++|+|+.++||+ ||+|.+|+++|++++++.+. ...++...+|+++|+++
T Consensus 24 ~~~~~~~~G~--~~~d~~g~----~~lD~~~~~~~~~~Gh~-~~~i~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~ 95 (401)
T PRK00854 24 DVVLTRGEGV--WVWDTDGN----RYLDCLSAYSAVNQGHC-HPKILAAMVEQAGRLTLTSR-AFRNDQLAPLYEELAAL 95 (401)
T ss_pred CceEEeeeeC--EEEECCCC----EEEEcCcchhhccCCCC-CHHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHhh
Confidence 4578888887 79999999 99999999999999999 99999999999999877543 35578999999999999
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhh-cccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSF-DHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~-~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.+. ++++|++||+||||+|||+| |.++. +.|. +++|.+||+++++|||+|.+++++++.+..+.
T Consensus 96 ~~~---~~~~~~~SGs~A~e~al~~a-~~~~~~~~g~-----------~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 96 TGS---HKVLPMNSGAEAVETAIKAV-RKWGYEVKGV-----------PEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred CCC---CEEEEeCCcHHHHHHHHHHH-HHHHHhccCC-----------CCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 873 69999999999999999999 55532 2222 13467999999999999999888876543322
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. +. +. .+ +..+ ++|+|. +.+++.+.
T Consensus 161 ~-----~~---~~--~~------~~~~----------------~~~~d~------------------~~le~~i~----- 185 (401)
T PRK00854 161 G-----FG---PF--TP------GFRV----------------VPFGDA------------------EALEAAIT----- 185 (401)
T ss_pred c-----CC---CC--CC------CeEE----------------eCCCCH------------------HHHHHHhC-----
Confidence 1 00 00 01 1111 125553 45666663
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++++||+||+ ++.+|.+.++++||++|+++|++||++||+|||+|||||+|++++.+++|+.||++++||+|+||
T Consensus 186 ---~~~~aii~e~~-~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg 261 (401)
T PRK00854 186 ---PNTVAFLVEPI-QGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGG 261 (401)
T ss_pred ---CCeEEEEEccc-cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCC
Confidence 36899999998 99999999999999999999999999999999999999999988888899999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-------------------HHH------------HHHHHHHHcC--CCeeEEEeeeeE
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LWD------------LELIQQISSH--RTVQRVVALGTL 741 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~~------------~~l~~~l~~~--~~v~~vrg~Gl~ 741 (818)
++|+|++++++++++.+..... .+. +.+.+.|+.. +.+.++++.|++
T Consensus 262 ~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~ 341 (401)
T PRK00854 262 FYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLM 341 (401)
T ss_pred ccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceE
Confidence 8999999999999987753211 111 1223334433 235678999999
Q ss_pred EEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 742 CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 742 ~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+.+++..+. ..+..+++.|+++||++.+. ++.+||+||+.+|++||++++++|++++.
T Consensus 342 ~~i~~~~~~-------~~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 342 LAVELEPEA-------GGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred EEEEEecCc-------hhHHHHHHHHHHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 999886441 23567899999999999875 48999999999999999999999998763
No 81
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=1.6e-46 Score=423.74 Aligned_cols=348 Identities=21% Similarity=0.289 Sum_probs=275.6
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|.++.+++|. |+||.||+ +||||+||+++.++||+ ||+|.+|+++|++++++.+. .+.++...+++++|++
T Consensus 13 ~~~~~~~~~G~--~~~d~dg~----~~lD~~~~~~~~~~Gh~-~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 84 (400)
T PTZ00125 13 LPVVLKRGKGV--FVWDVEGK----KYYDFLSAYSAVNQGHC-HPKILAALINQAQKLTLTSR-AFYNDVLGLAEKYITD 84 (400)
T ss_pred CCccEEeeecC--EEEeCCCC----EEEEcccCHhhccCCcC-CHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHHh
Confidence 35678888887 79999999 99999999999999999 99999999999998887543 2347788888899888
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhh-hcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFS-FDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t-~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
+++ .++++|++||++|||+|||++ |.++ .++|. ..++.+||+++++|||++.+++++++...+.
T Consensus 85 ~~~---~~~~~~~~SGs~A~e~al~~~-~~~~~~~~~~-----------~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~ 149 (400)
T PTZ00125 85 LFG---YDKVLPMNSGAEAGETALKFA-RKWGYEVKGI-----------PENQAKIIFCNGNFSGRTIGACSASTDPKCY 149 (400)
T ss_pred CCC---CCEEEEeCCcHHHHHHHHHHH-HHHHHhccCC-----------CCCCCeEEEECCCcCCccHHHHhhcCCcchh
Confidence 765 579999999999999999999 5442 22221 0246799999999999999999988643221
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
.. +. ... + +... +.|+|+ +.+++.++
T Consensus 150 ~~-----~~---~~~--~------~~~~----------------~~~~d~------------------~~le~~l~---- 175 (400)
T PTZ00125 150 NN-----FG---PFV--P------GFEL----------------VDYNDV------------------EALEKLLQ---- 175 (400)
T ss_pred cc-----CC---CCC--C------CceE----------------eCCCCH------------------HHHHHHhC----
Confidence 11 00 000 0 0001 124443 56676664
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccC
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTG 693 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLgg 693 (818)
.+++++|++||+ ++.+|++.++++|+++|+++|++||++||+|||++||||+|++++.+++++.||++++||++++
T Consensus 176 ---~~~~~~v~~ep~-~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~ 251 (400)
T PTZ00125 176 ---DPNVAAFIVEPI-QGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSG 251 (400)
T ss_pred ---CCCeEEEEEcCc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccC
Confidence 247999999998 9999999999999999999999999999999999999999999888889999999999999999
Q ss_pred CccccceeecchHHHhhccCChH-------------------HHH------------HHHHHHH----HcCCCeeEEEee
Q 003466 694 GVIPLAATLATNAVFDSFVGDSK-------------------LWD------------LELIQQI----SSHRTVQRVVAL 738 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~~-------------------~~~------------~~l~~~l----~~~~~v~~vrg~ 738 (818)
|++|+|++++++++++.+..... .+. +.+.+.+ ..++.+..+++.
T Consensus 252 g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~ 331 (400)
T PTZ00125 252 GLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGK 331 (400)
T ss_pred CCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecc
Confidence 97899999999999887643211 011 1122222 335677789999
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
|+++++++..+. ...+..+++.|+++||++.|.+ +.+||.|++++++++|++++++|++++.+++
T Consensus 332 g~~~~v~~~~~~------~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 332 GLLNAIVFDHSD------GVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred cEEEEEEEccCc------chHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 999999986421 1346678999999999999864 8999999999999999999999999988764
No 82
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=7.2e-45 Score=407.48 Aligned_cols=328 Identities=24% Similarity=0.283 Sum_probs=262.5
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|.++++++|. |+||.||+ +|||+.|++|+.++|| ||+|++|+.+|++++.+.. ....++...+++++|..
T Consensus 11 ~~~~~~~~~G~--~l~d~dg~----~~lD~~s~~~~~~lG~--~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~ 81 (375)
T PRK04260 11 AAIEFVKAEGN--YLIDTDGK----KYLDFSSGIGVTNLGF--HPQVQQALQKQAGLIWHSP-NLYLNSLQEEVAQKLIG 81 (375)
T ss_pred CCceEEEeeeC--EEEeCCCC----EEEECCCCcccccCCC--CHHHHHHHHHHHHhcCccc-CccCCHHHHHHHHHHhc
Confidence 35688888887 79999999 9999999999999999 6999999999999875433 23457778888887765
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
.. ..+++|++||+|||+.|+|+| |.+++ +.+||+++++|||++.+++++++.+.++.
T Consensus 82 ~~----~~~~~~~~SGseA~~~Al~~a-r~~~~------------------~~~vv~~~~~yHg~~~~~~~~~~~~~~~~ 138 (375)
T PRK04260 82 DK----DYLAFFCNSGAEANEAAIKIA-RKATG------------------KQEIITFQNSFHGRTFGSMSATGQDKIKD 138 (375)
T ss_pred Cc----CCEEEEcCccHHHHHHHHHHH-HHhcC------------------CCeEEEECCCcCcccHHHHhccCCcccCC
Confidence 21 246899999999999999999 66644 35899999999999999999987654332
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. + +.. ++. .+. ..|||. +.+++.+.
T Consensus 139 ~----~----~~~--~~~-----------~~~-----------~~~~dl------------------~~l~~~l~----- 163 (375)
T PRK04260 139 G----F----GDG--VPH-----------FSY-----------AIFNDL------------------NSVKALVN----- 163 (375)
T ss_pred C----C----CCC--CCC-----------eEE-----------eCCCCH------------------HHHHHhcC-----
Confidence 2 0 000 000 000 014442 45555552
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
+++++|++||+ ++++|+++++++|+++++++|+++|+++|+||+++||||+|.++.++.+++.||++||||+|++|
T Consensus 164 ---~~~a~vi~e~v-~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G 239 (375)
T PRK04260 164 ---KNTAAVMLELV-QGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLANG 239 (375)
T ss_pred ---CCeEEEEECCe-ECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEecccccCC
Confidence 46899999998 99999999999999999999999999999999999999999988888899999999999999999
Q ss_pred ccccceeecchHHHhhccCChH-----------------------------------HHHHHHHHHHHcCCCeeEEEeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLELIQQISSHRTVQRVVALG 739 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~l~~~l~~~~~v~~vrg~G 739 (818)
+|+|++++++++++.+..... .+.+.+.+.+.+++.+..+++.|
T Consensus 240 -~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g 318 (375)
T PRK04260 240 -VPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLG 318 (375)
T ss_pred -cceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccc
Confidence 799999999999987753211 11112333345666778899999
Q ss_pred eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 740 TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 740 l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
+++++++..+ +..+.+.|+++||++.+.+ +.+|+.||+++|++||++++++|+++
T Consensus 319 ~~~~~~~~~~----------~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 319 YMIGIETTAD----------LSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred eEEEEEecCc----------HHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 9999999432 4578999999999998876 78999999999999999999999875
No 83
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.2e-44 Score=407.74 Aligned_cols=350 Identities=25% Similarity=0.358 Sum_probs=278.8
Q ss_pred hcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccccc
Q 003466 357 AGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM 436 (818)
Q Consensus 357 ~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~ 436 (818)
...++|++++. .|.++++++|. ++||.||+ +|||+.+|++++++||+ ||+|.+|+++|+++..+..
T Consensus 10 ~~~~~~~~~~~-------~~~~~~~~~G~--~~~d~dg~----~~iD~~~g~~~~~lG~~-~p~v~~a~~~~~~~~~~~~ 75 (396)
T PRK02627 10 EKKYLMNTYGR-------LPIAFVRGEGA--RLWDDDGK----EYLDFLAGIAVNNLGHC-HPKLVEAIQEQAAKLIHTS 75 (396)
T ss_pred HHHhhcccccC-------CCceEEeeeeC--EEEeCCCC----EEEECCccHHhccCCCC-CHHHHHHHHHHHhhccccc
Confidence 33445666543 35688898887 79999999 99999999999999999 9999999999999875543
Q ss_pred CCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCC
Q 003466 437 FPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSY 516 (818)
Q Consensus 437 ~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sY 516 (818)
. .+.++...+|+++|++..+ .++++|++||+||++.|+|++ +.++++.+ .++.+|++++++|
T Consensus 76 ~-~~~~~~~~~la~~l~~~~~---~~~v~~~~gg~eA~~~al~~a-~~~~~~~~-------------~~~~~ii~~~~~y 137 (396)
T PRK02627 76 N-LYYIEPQEELAEKLVELSG---MDKVFFCNSGAEANEAAIKLA-RKYGHKKG-------------IEKPEIITAENSF 137 (396)
T ss_pred c-ccCCHHHHHHHHHHHhhcC---CCEEEECCCcHHHHHHHHHHH-HHHhcccC-------------CCCCeEEEECCCc
Confidence 2 3568899999999999865 489999999999999999999 67766533 2346899999999
Q ss_pred CCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhH
Q 003466 517 HGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDL 596 (818)
Q Consensus 517 HG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~ 596 (818)
||.+..++++++...++..+ .+. .++..+ ++|||+
T Consensus 138 hg~~~~~~~~~~~~~~~~~~-~~~---------------~~~~~~----------------~~~~d~------------- 172 (396)
T PRK02627 138 HGRTLATLSATGQPKYQEGF-EPL---------------VEGFIY----------------VPFNDI------------- 172 (396)
T ss_pred CcccHHHHHhcCCccccccC-CCC---------------CCCceE----------------eCCCCH-------------
Confidence 99999999988755433210 000 001111 114442
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhc
Q 003466 597 ASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTAD 676 (818)
Q Consensus 597 ~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e 676 (818)
+.+++.+. +++++|++||+ ++.+|+.+++++|+++|+++|++||++||+||+++||||+|++++++
T Consensus 173 -----~~l~~~i~--------~~~~~vii~p~-~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~ 238 (396)
T PRK02627 173 -----EALKAAIT--------DKTAAVMLEPI-QGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQ 238 (396)
T ss_pred -----HHHHHhcC--------CCeEEEEEecc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeeh
Confidence 45555552 47899999998 99999889999999999999999999999999999999999988888
Q ss_pred ccCCCCcEEEecccccCCccccceeecchHHHhhccCChH-----------------------------------HHHHH
Q 003466 677 LLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDSK-----------------------------------LWDLE 721 (818)
Q Consensus 677 ~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~~-----------------------------------~~~~~ 721 (818)
.+++.||+++|||++++| +|+|++++++++++.+..... .+.+.
T Consensus 239 ~~~~~pdi~t~sK~~~~G-~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~ 317 (396)
T PRK02627 239 HYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAK 317 (396)
T ss_pred hcCCCCCEEEEcchhhCC-cccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 899999999999999999 799999999999988753211 01111
Q ss_pred HHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHH
Q 003466 722 LIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLK 800 (818)
Q Consensus 722 l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~ 800 (818)
+.+.+..++.+..+++.|+++.+++..+ +..+++.|+++||++.+.+ +.+|+.|++.+++++|++++++
T Consensus 318 l~~~~~~~~~~~~~~~~g~~~~i~~~~~----------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~ 387 (396)
T PRK02627 318 LRELLEKYPGIKEVRGLGLMIGIELDRP----------AAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDR 387 (396)
T ss_pred HHHHHHhCCCeeeeccCcEEEEEEecCc----------HHHHHHHHHHCCeEEeecCCCEEEEECCcccCHHHHHHHHHH
Confidence 2222344666778999999999998322 5678999999999999865 7899999999999999999999
Q ss_pred HHHHHHHH
Q 003466 801 LYQRLEEF 808 (818)
Q Consensus 801 l~~~l~~l 808 (818)
|+++++++
T Consensus 388 l~~~l~~~ 395 (396)
T PRK02627 388 LEEVLKEL 395 (396)
T ss_pred HHHHHHhh
Confidence 99988654
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=2.4e-44 Score=406.98 Aligned_cols=373 Identities=28% Similarity=0.390 Sum_probs=287.4
Q ss_pred hhhcCccccccCCCCCCCCCCeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccc
Q 003466 355 KRAGELFWWPFTQHKLVPEEAVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGH 434 (818)
Q Consensus 355 ~~~~~~~~~p~t~~~~~~~~~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~ 434 (818)
+++++++|++++. ...|.++++++|. ++||.||+ +|||+++|+|+.++||+ ||+|++|+++|+++..+
T Consensus 3 ~~~~~~~~~~~~~-----~~~~~~~~~~~g~--~~~d~dG~----~~id~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~ 70 (413)
T cd00610 3 ERDRKVLWHGYTV-----RPYPLVIVRAEGA--YLYDVDGN----RYLDFLSGIGVLNLGHN-HPEVVEALKEQLAKLTH 70 (413)
T ss_pred chhhhhccccccC-----CCCCceEEeeecC--EEEeCCCC----EEEEcCccHHhhccCCC-CHHHHHHHHHHHHhCcC
Confidence 4567789999871 2457889998887 79999999 99999999999999999 99999999999987765
Q ss_pred ccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcC
Q 003466 435 VMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKG 514 (818)
Q Consensus 435 ~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~ 514 (818)
.....+.++...+|+++|++++|.+ .++++|++||+|||+.|++++ |.+++ +.+||++++
T Consensus 71 ~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v~~~~sgsea~~~al~~~-~~~~~------------------~~~ii~~~~ 130 (413)
T cd00610 71 FSLGFFYNEPAVELAELLLALTPEG-LDKVFFVNSGTEAVEAALKLA-RAYTG------------------RKKIISFEG 130 (413)
T ss_pred ccCcccCCHHHHHHHHHHHHhCCCC-CCEEEEcCcHHHHHHHHHHHH-HHHcC------------------CCeEEEECC
Confidence 4432346899999999999998743 589999999999999999999 66644 358999999
Q ss_pred CCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCch
Q 003466 515 SYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSS 594 (818)
Q Consensus 515 sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~ 594 (818)
+|||++.+++++++...++.. +. ... .....++.+.+.. ..
T Consensus 131 ~yhg~~~~~~~~~~~~~~~~~-----~~-------~~~----~~~~~~~~~~~~~-----------------------~~ 171 (413)
T cd00610 131 AYHGRTLGALSLTGSKKYRGG-----FG-------PLL----PGVLHVPYPYRYR-----------------------PP 171 (413)
T ss_pred CcCCccHHHHHhcCCcccccc-----CC-------CCC----CCcEEeCCCcccc-----------------------ch
Confidence 999999999998875433321 00 000 0111111111000 00
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch
Q 003466 595 DLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT 674 (818)
Q Consensus 595 ~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a 674 (818)
.......+.+++.+. .+++++++||+||+ ++++|.++++++|+++|+++|++||+++|+|||++||||+|.+++
T Consensus 172 ~~~~~d~~~l~~~l~-----~~~~~~~~vi~~p~-~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~ 245 (413)
T cd00610 172 AELADDLEALEEALE-----EHPEEVAAVIVEPI-QGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFA 245 (413)
T ss_pred hhHHHHHHHHHHHHh-----cCCCCEEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhh
Confidence 001112366777776 33568999999998 999999999999999999999999999999999999999999989
Q ss_pred hcccCCCCcEEEecccccCCccccceeecchHHHhhc--cCChH-------------------HHH------------HH
Q 003466 675 ADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSF--VGDSK-------------------LWD------------LE 721 (818)
Q Consensus 675 ~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l--~~~~~-------------------~~~------------~~ 721 (818)
++++++.||++++||++++| +|+|++++++++++.+ ..... .+. +.
T Consensus 246 ~~~~~~~~d~~t~sK~l~~g-~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~ 324 (413)
T cd00610 246 FEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEY 324 (413)
T ss_pred HhhcCCCCCeEEEcccccCc-cccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 99999999999999999999 7999999999999975 11100 111 11
Q ss_pred HHHHHH----cCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHH
Q 003466 722 LIQQIS----SHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQ 796 (818)
Q Consensus 722 l~~~l~----~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~ 796 (818)
+.+.++ .++.+..+++.|.++.+.+..+.....++...+..+++.|+++||++.+. ++.+|+.|++.+|++||++
T Consensus 325 l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~~ 404 (413)
T cd00610 325 LRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDE 404 (413)
T ss_pred HHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHH
Confidence 222222 23567778999999999997542111222345678999999999999987 5899999999999999999
Q ss_pred HHHHHHHHH
Q 003466 797 LLLKLYQRL 805 (818)
Q Consensus 797 ~~~~l~~~l 805 (818)
++++|++++
T Consensus 405 ~~~~l~~~l 413 (413)
T cd00610 405 GLDALDEAL 413 (413)
T ss_pred HHHHHHHhC
Confidence 999998763
No 85
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=361.60 Aligned_cols=374 Identities=20% Similarity=0.208 Sum_probs=271.5
Q ss_pred eecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHH-hhhhcccccCCCCCChhHHHHHHH----HHhc
Q 003466 381 SRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGY-TAARFGHVMFPENVYEPALECAEL----LLQG 455 (818)
Q Consensus 381 ~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~-q~~~~~~~~~~~~~~~~~~eLae~----L~~~ 455 (818)
+..|. |++|+||| .+||..+.+.+..+||| ||.++++++. |+.+.- +..+...+-|..++++. |...
T Consensus 64 kS~GN--YlvDvDGN----~lLDvYsQIsSvplGYn-~P~LvK~a~~p~~~~~l-vnRPALg~fP~kd~~~~l~~~ll~~ 135 (484)
T KOG1405|consen 64 KSIGN--YLVDVDGN----RLLDVYSQISSVPLGYN-NPALVKAAQQPQNATML-VNRPALGNFPPKDFAEKLRQSLLSI 135 (484)
T ss_pred hhcCc--eEEecCCC----eeehhhhhhcccccCCC-CHHHHHHhcChHHHHHH-hccccccCCChhhHHHHHHHHHHhh
Confidence 45687 69999999 99999999999999999 9999998874 433321 11111112233444444 4445
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhh-hcccccccccCCC-------ccccccceEEEEEcCCCCCCcccccccc
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFS-FDHEVLVDFLGKD-------TTEKCIELKVLALKGSYHGDTLGAMEAQ 527 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t-~~~G~~~~~~~~~-------~~~~~~r~~II~~~~sYHG~t~~als~t 527 (818)
.|+| +..|.+.-+||.|||.|+|.|+-+|. +++|+ .++..++ +.+......|++|.|+|||++++++|.|
T Consensus 136 APKG-~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~-~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT 213 (484)
T KOG1405|consen 136 APKG-QKQVITMLCGSCANENAYKTAFIWYRAKERGQ-AGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTT 213 (484)
T ss_pred Ccch-HHHHHHHhccccccHHHHHHHHHHHHhhcCCC-CCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccc
Confidence 6766 68999999999999999999976664 33442 1221111 2244456789999999999999999999
Q ss_pred CCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHH
Q 003466 528 APSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQN 607 (818)
Q Consensus 528 g~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~ 607 (818)
..+..+.. .-+.|+||-..+. ...+|-.. .+.+| ...++.|++.+|++
T Consensus 214 ~SKpIHKl--------diPaFdWPiA~fP----~ykYPLde--------nv~~N------------~ked~~Cl~~Ve~l 261 (484)
T KOG1405|consen 214 HSKPIHKL--------DIPAFDWPIAPFP----RYKYPLDE--------NVAEN------------KKEDQGCLAEVEDL 261 (484)
T ss_pred cCcccccc--------CCCCCCCCCCCCc----cccCChhh--------hhhhh------------hhhhhhHHHHHHHH
Confidence 87765543 2234566543220 01111100 11122 12345667888888
Q ss_pred HhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC--CCcEE
Q 003466 608 LLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC--VPDIA 685 (818)
Q Consensus 608 L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv--~PDiv 685 (818)
|..+. .....|||+||||| |++||+...++.|+++||++|++||+.+|+||||||-|-||++|++++|++ .||++
T Consensus 262 i~~~~--~k~~pVaaiIvEPI-QsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~v 338 (484)
T KOG1405|consen 262 IVKYR--KKKKPVAAIIVEPI-QSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVV 338 (484)
T ss_pred HHHHh--hcCCCeEEEEeech-hccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccce
Confidence 88652 23457999999998 999999999999999999999999999999999999999999999999998 58999
Q ss_pred Eecccc-cCCccccceeecch--HHHhhccCChH--------------------------HHHHHHHHHHHcCCC-eeEE
Q 003466 686 CYGKLL-TGGVIPLAATLATN--AVFDSFVGDSK--------------------------LWDLELIQQISSHRT-VQRV 735 (818)
Q Consensus 686 tlgKgL-ggGy~PlsAvl~~~--~i~~~l~~~~~--------------------------~~~~~l~~~l~~~~~-v~~v 735 (818)
||||-+ +|||+---...-++ +++.++.+... .+..+|.+.-+++|. +..+
T Consensus 339 TFSKK~q~gGffh~~~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~ 418 (484)
T KOG1405|consen 339 TFSKKFQTGGFFHDEEFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNL 418 (484)
T ss_pred ehhhhhhcCccccCcccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcc
Confidence 999977 68875443333332 23333333322 112233444467775 7889
Q ss_pred EeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 736 VALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 736 rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
||+|.++++++... ..-..++..++-+|+.+..+| ..|||.|++++++-+.+-++++|++.+..
T Consensus 419 RGrGTF~a~d~ps~--------~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 419 RGRGTFIAWDCPSG--------SIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred cccceEEEEeCCCh--------HHHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 99999999999766 455678889999999999887 78999999999999999999999998864
No 86
>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism]
Probab=100.00 E-value=1.2e-39 Score=334.52 Aligned_cols=198 Identities=31% Similarity=0.406 Sum_probs=173.9
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCC---CchHHHHHhccCCccccCCCccccc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHD---SDSRFLFTKLPSLSLRRNFPSSLIL 112 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~---~d~~~~~~~~~~~~~~~~~~~~~~~ 112 (818)
||+.||||||+||||||++|++|+++|+ .+|+++++|||||+|.... +|..++++..
T Consensus 1 m~~~~fVtGTDT~VGKTv~S~aL~~~l~-----~~g~~~~~~KPVqsG~~~~~~~~D~~~l~~~~--------------- 60 (223)
T COG0132 1 MMKRFFVTGTDTGVGKTVVSAALAQALK-----QQGYSVAGYKPVQTGSEETAENSDALVLQRLS--------------- 60 (223)
T ss_pred CCceEEEEeCCCCccHHHHHHHHHHHHH-----hCCCeeEEECceeeCCCCCCCCchHHHHHHhc---------------
Confidence 6889999999999999999999999994 8999999999999998765 4766666553
Q ss_pred ccchhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCC
Q 003466 113 SNSILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVV 192 (818)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~ 192 (818)
+..++|+. +|+|.|++|+|||+|++.| |+.+
T Consensus 61 -----------------~~~~~~~~-------------------------------~~py~f~~P~sPhlAa~~e-g~~I 91 (223)
T COG0132 61 -----------------GLDLSYEL-------------------------------INPYRFKEPLSPHLAAELE-GRTI 91 (223)
T ss_pred -----------------CCCccccc-------------------------------ccceecCCCCCcHHHHhhc-CCcc
Confidence 33333444 8899999999999999999 9999
Q ss_pred ChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHH
Q 003466 193 GDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYE 272 (818)
Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~ 272 (818)
+.+++...+.++.+. +|++|||||||+++|++++.+..||++.+++|||||+..++|+|||++++.+
T Consensus 92 ~~~~l~~~l~~l~~~-------------~d~vlVEGAGGl~vPl~~~~~~~D~~~~~~lpvILV~~~~LGtINHtlLt~e 158 (223)
T COG0132 92 DLEKLSQGLRQLLKK-------------YDLVLVEGAGGLLVPLTEEYTFADLAVQLQLPVILVVGIKLGTINHTLLTVE 158 (223)
T ss_pred cHHHHHHHHHhhhcc-------------cCEEEEeCCCceeeecCCcccHHHHHHHcCCCEEEEecCCccHHHHHHHHHH
Confidence 999999998887755 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCcEEEEEEccCCCC------CHHHHHHhhcCCCCEEe-cCCCCCCC
Q 003466 273 SLKLRGYDVVAVVFEDHGLV------NEVPLMSYLRNRVPVLV-LPPLPQDS 317 (818)
Q Consensus 273 ~l~~~~~~v~gvi~N~~~~~------~~~~l~~~~~~~~pvlg-iP~~~~~~ 317 (818)
+++++|+++.|||+|+..+. ....+++.+ +.|++| +|+.++..
T Consensus 159 al~~~gl~l~G~I~n~~~~~~~~~~~~~~~l~~~~--~~p~~g~~p~~~~~~ 208 (223)
T COG0132 159 ALRARGLPLAGWVANGINPELDHYAEINATLLKRI--GAPLLGIIPYLPESE 208 (223)
T ss_pred HHHHCCCCEEEEEEccCCCchhHHHHHHHHHHHhc--CCCccccccCCcccc
Confidence 99999999999999998321 222455666 999999 99977743
No 87
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=4.4e-37 Score=344.03 Aligned_cols=336 Identities=26% Similarity=0.358 Sum_probs=261.3
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHh
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQ 454 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~ 454 (818)
.|+++++++|. ++||.||+ +||||++|+|++++||+ ||.|.+|+.++++++.+.. ..+.++...+|+++|++
T Consensus 9 ~~~~~~~~~g~--~~~~~~g~----~~id~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~l~~~la~ 80 (379)
T TIGR00707 9 LPVKIVRGKGA--YVYDVNGK----EYLDFVAGIAVNSLGHA-HPKLVEALKEQLEKLVHVS-NLYYTEPQEELAEKLVE 80 (379)
T ss_pred CCccEEEeecC--EEEeCCCC----EEEEcCcchhhccCCCC-CHHHHHHHHHHHhhccccc-cccCCHHHHHHHHHHHh
Confidence 46688899887 69999999 99999999999999999 9999999999999876533 23467889999999999
Q ss_pred ccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCC
Q 003466 455 GVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTG 534 (818)
Q Consensus 455 ~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~ 534 (818)
+++ .+++++++||++|++.|++++ +.+++..| +.+.+|++++.+|||.+..+...++...+..
T Consensus 81 ~~g---~~~~~~~~sg~~a~~~a~~~~-~~~~~~~~-------------~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~ 143 (379)
T TIGR00707 81 HSG---ADRVFFCNSGAEANEAALKLA-RKYTGDKG-------------KEKKKIIAFENSFHGRTMGALSATGQPKYQK 143 (379)
T ss_pred hCC---CCEEEEeCCcHHHHHHHHHHH-HHHhhccC-------------CCCCeEEEECCCcCCccHHHHHhcCChhhhc
Confidence 987 469999999999999999988 66655321 2246899999999999988887776443221
Q ss_pred cCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC
Q 003466 535 FLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL 614 (818)
Q Consensus 535 ~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~ 614 (818)
. ..+.. ....+ .+|||+ +.+++.+.
T Consensus 144 ~-~~~~~---------------~~~~~----------------~~~~d~------------------~~l~~~~~----- 168 (379)
T TIGR00707 144 G-FEPLV---------------PGFSY----------------APYNDI------------------ESLKKAID----- 168 (379)
T ss_pred c-CCCCC---------------CCcee----------------eCCCCH------------------HHHHHHhh-----
Confidence 1 00000 00000 124443 45666553
Q ss_pred CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCC
Q 003466 615 KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGG 694 (818)
Q Consensus 615 ~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggG 694 (818)
.++++|++||+ ++.+|+.+++.+++++|.++|++||+++|+||+++|||++|+++.++.+++.||++++||++++|
T Consensus 169 ---~~~~~v~~~p~-~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G 244 (379)
T TIGR00707 169 ---DETAAVIVEPI-QGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAKGLGGG 244 (379)
T ss_pred ---hCeeEEEEEcc-ccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcccccCC
Confidence 25789999998 99999888899999999999999999999999999999999877777789999999999999998
Q ss_pred ccccceeecchHHHhhccCChH-------------------HHH------------HHHHHHHHcC---CCeeEEEeeee
Q 003466 695 VIPLAATLATNAVFDSFVGDSK-------------------LWD------------LELIQQISSH---RTVQRVVALGT 740 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~-------------------~~~------------~~l~~~l~~~---~~v~~vrg~Gl 740 (818)
+|+|++++++++++.+..... .+. +.+.+.+++. ..+..+++.|.
T Consensus 245 -~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~ 323 (379)
T TIGR00707 245 -VPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGL 323 (379)
T ss_pred -cccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCce
Confidence 799999999999988764211 000 1122222221 11234667788
Q ss_pred EEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 741 LCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 741 ~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
++.+++..+ +..+++.|+++||++.|.+ +.+|++|++.+|++++++++++|++++
T Consensus 324 ~~~~~~~~~----------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 324 MLGIELEAP----------CKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred EEEEEecCc----------HHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 888887533 3578889999999999976 799999999999999999999998763
No 88
>PF13500 AAA_26: AAA domain; PDB: 3OF5_A 2IOJ_A 4A0G_B 4A0R_A 4A0H_B 4A0F_B 3FMI_C 3FPA_D 3FMF_C 3FGN_A ....
Probab=100.00 E-value=1.7e-35 Score=303.15 Aligned_cols=197 Identities=35% Similarity=0.469 Sum_probs=163.1
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHhccCCccccCCCcccccccchh
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTKLPSLSLRRNFPSSLILSNSIL 117 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (818)
|+|||+||+|++|||+||+||+++|. ++|.+|+|||||++|...+.|..++.+.+ ++
T Consensus 1 r~i~I~~t~t~vGKT~vslgL~~~l~-----~~g~~v~~~KPi~~~~~~d~d~~~~~~~~-~~----------------- 57 (199)
T PF13500_consen 1 RTIFITGTDTGVGKTVVSLGLARALR-----RRGIKVGYFKPIQTGPEDDEDAELIRELF-GL----------------- 57 (199)
T ss_dssp -EEEEEESSSSSSHHHHHHHHHHHHH-----HTTSEEEEEEEEEESCCCSSHHHHHHHHC-CT-----------------
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHH-----hCCCceEEEeeeEecCCCCchHHHHHHHh-CC-----------------
Confidence 57999999999999999999999994 89999999999999988888988887765 32
Q ss_pred hhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCCChhHH
Q 003466 118 FSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVVGDSKV 197 (818)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~~~~~i 197 (818)
+.+ ....++|.|.+|++|+++++.+ +..+.++++
T Consensus 58 --------------~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i 91 (199)
T PF13500_consen 58 --------------SEP-------------------------------PDDPSPYTFDEPASPHLAAELE-GVDIDLERI 91 (199)
T ss_dssp --------------CCC-------------------------------HHHHECEEESSSS-HHHHHHHH-T----HHHH
T ss_pred --------------Ccc-------------------------------cccccccccCcccCHHHHhhcc-CCcccHHHH
Confidence 111 1236799999999999999998 777777777
Q ss_pred HHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhC
Q 003466 198 IETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLR 277 (818)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~ 277 (818)
+ ++++.++ +|++||||+||+.+|...+.+|+|||+.|++|||||++.++|+++|+++++++++.+
T Consensus 92 ~--~~~l~~~-------------~D~vlVEGag~~~~~~~~~~~n~dia~~L~a~vIlV~~~~~g~i~~~l~~~~~~~~~ 156 (199)
T PF13500_consen 92 I--YKELAEE-------------YDVVLVEGAGGLMVPIFSGDLNADIAKALGAPVILVASGRLGTINHTLLTIEALKQR 156 (199)
T ss_dssp H--HHHCHTT-------------TCEEEEEESSSTTSECCTTEEHHHHHHHHT-EEEEEEESSTTHHHHHHHHHHHHHCT
T ss_pred H--HHHHhhc-------------CCEEEEeCCcccCcccccChHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHHHHhc
Confidence 6 5666554 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEccC-CCCCHHHHHHhhcCCCCEEe-cCCCCCCCcch
Q 003466 278 GYDVVAVVFEDH-GLVNEVPLMSYLRNRVPVLV-LPPLPQDSSND 320 (818)
Q Consensus 278 ~~~v~gvi~N~~-~~~~~~~l~~~~~~~~pvlg-iP~~~~~~~~~ 320 (818)
|+++.|||+|++ .+++.+++++.+ ++||+| ||+.+.+++|+
T Consensus 157 g~~v~GvI~N~~~~~~~~~~l~~~~--~i~vlg~iP~~~~L~~p~ 199 (199)
T PF13500_consen 157 GIRVLGVILNRVPEPENLEALREKS--GIPVLGVIPEDPDLSAPT 199 (199)
T ss_dssp TS-EEEEEEEECTCCHHHHHHHHHH--CCEECE---SSTT-----
T ss_pred CCCEEEEEEECCCCHHHHHHHHHhC--CCCEEEECCCCcccccCC
Confidence 999999999998 556888999998 999999 99999998763
No 89
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=308.96 Aligned_cols=318 Identities=12% Similarity=0.024 Sum_probs=224.2
Q ss_pred EEEEeecCCeeEEEeCCcCccccceeecccccccccCC-CCCCHHHHHHHHHhhhhccc-c-c-C-CCCCChhHHHHHHH
Q 003466 377 TVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPD-ATLQIELARDMGYTAARFGH-V-M-F-PENVYEPALECAEL 451 (818)
Q Consensus 377 ~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lG-h~~hp~V~eAi~~q~~~~~~-~-~-~-~~~~~~~~~eLae~ 451 (818)
+.+++++|. ++||.||+ +||||.| +.++| |+ ||+|++|+++|++++++ . . . ....++++.+|+++
T Consensus 30 ~~~~~~~G~--~~~d~~g~----~~ld~~s---~~~lgl~~-~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~ 99 (402)
T PRK07505 30 LTVGEREGI--LITLADGH----TFVNFVS---CSYLGLDT-HPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEA 99 (402)
T ss_pred ceeeccCCc--cEEecCCc----eEEEeec---CCccCCCC-CHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHH
Confidence 467788886 79999999 9999998 67999 99 99999999999998752 1 1 1 11347889999999
Q ss_pred HHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC
Q 003466 452 LLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP 531 (818)
Q Consensus 452 L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~ 531 (818)
|+++++ . ++++++||++||+.|++++.+... . +++.++|+++++|||+..+...
T Consensus 100 la~~~~---~-~~~~~~sG~~a~~~ai~~~~~~~~--~--------------~~~~~vi~~~~~~H~s~~~~~~------ 153 (402)
T PRK07505 100 LSELFG---A-SVLTFTSCSAAHLGILPLLASGHL--T--------------GGVPPHMVFDKNAHASLNILKG------ 153 (402)
T ss_pred HHHHhC---C-CEEEECChHHHHHHHHHHHHhccc--C--------------CCCCCEEEEchhhhHhHHhhhh------
Confidence 999987 3 788888999999999999832110 0 2356799999999984321100
Q ss_pred CCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcC
Q 003466 532 YTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQN 611 (818)
Q Consensus 532 ~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~ 611 (818)
.... .+ ...+ + +|+|. +.+++.+.
T Consensus 154 ~~~~--------------~~------~v~~--~--------------~~~d~------------------~~l~~~~~-- 177 (402)
T PRK07505 154 ICAD--------------ET------EVET--I--------------DHNDL------------------DALEDICK-- 177 (402)
T ss_pred hhhc--------------CC------eEEE--e--------------CCCCH------------------HHHHHHHh--
Confidence 0000 00 0011 1 14443 45666664
Q ss_pred CCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecc--cCcccCCccchhcccCC-CCcEE---
Q 003466 612 PGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVF--TGFWRLGVETTADLLGC-VPDIA--- 685 (818)
Q Consensus 612 ~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~--TGfGRtG~~~a~e~~gv-~PDiv--- 685 (818)
....+++|+||+ +..|++.+ +++|+++|++||++||+||+| +||||+|++++.+++++ .||.+
T Consensus 178 -----~~~~~~vl~~p~-~~~G~~~~-----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~ 246 (402)
T PRK07505 178 -----TNKTVAYVADGV-YSMGGIAP-----VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIA 246 (402)
T ss_pred -----cCCCEEEEEecc-cccCCcCC-----HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEE
Confidence 234789999998 88866544 899999999999999999998 68999999888888998 78855
Q ss_pred -EecccccCCccccceee-cchHHHhhccCC--------h----H------H---HH--------HHHHHHHHcCCC--e
Q 003466 686 -CYGKLLTGGVIPLAATL-ATNAVFDSFVGD--------S----K------L---WD--------LELIQQISSHRT--V 732 (818)
Q Consensus 686 -tlgKgLggGy~PlsAvl-~~~~i~~~l~~~--------~----~------~---~~--------~~l~~~l~~~~~--v 732 (818)
++||++|+| .|.++ .++++++.+... . . . +. +.+.+.++.++. .
T Consensus 247 ~s~sK~~~~~---Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 323 (402)
T PRK07505 247 ASLGKAFGAS---GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIP 323 (402)
T ss_pred Eechhhhhcc---CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH
Confidence 799998853 13344 467777655321 0 0 0 11 122233322221 1
Q ss_pred eEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------C-CEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 733 QRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------G-NVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 733 ~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g-~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
..+++.++++......+ ...+..+.+.|+++||++++. + +.|||+|++++|++|+++++++|+++
T Consensus 324 ~~~~g~~~~i~~~~~~~-------~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~ 396 (402)
T PRK07505 324 TEQSGSFLPIRLIYIGD-------EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEI 396 (402)
T ss_pred hcCCCCCCCEEEEEeCC-------HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHH
Confidence 34577777764432222 134667899999999999863 2 68999999999999999999999988
Q ss_pred HHH
Q 003466 805 LEE 807 (818)
Q Consensus 805 l~~ 807 (818)
+++
T Consensus 397 l~~ 399 (402)
T PRK07505 397 LDE 399 (402)
T ss_pred HHh
Confidence 754
No 90
>PRK12374 putative dithiobiotin synthetase; Provisional
Probab=99.98 E-value=1.3e-31 Score=280.99 Aligned_cols=203 Identities=22% Similarity=0.227 Sum_probs=164.3
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCC------CCchHHHHHhccCCccccCCCcc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPH------DSDSRFLFTKLPSLSLRRNFPSS 109 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~------~~d~~~~~~~~~~~~~~~~~~~~ 109 (818)
||++|||+||+|++|||+||++|+++| + ++|.+|+|||||++|+.. +.|..++.+.+
T Consensus 1 m~~~ifIt~t~t~vGKT~vt~~L~~~l----~-~~g~~v~~~KPi~~g~~~~~~~~~~~D~~~l~~~~------------ 63 (231)
T PRK12374 1 MLKRFFITGTDTSVGKTVVSRALLQAL----A-SQGKTVAGYKPVAKGSKETPEGLRNKDALVLQSVS------------ 63 (231)
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHH----H-HCCCeEEEECccccCCccCCCCCchHHHHHHHHhc------------
Confidence 577899999999999999999999999 4 899999999999998632 23344443332
Q ss_pred cccccchhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcC
Q 003466 110 LILSNSILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESG 189 (818)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~ 189 (818)
+.+.+++. ++||.|..+ .+++.+ +
T Consensus 64 --------------------~~~~~~~~-------------------------------~~p~~~~~~----~a~~~~-~ 87 (231)
T PRK12374 64 --------------------SIELPYEA-------------------------------VNPIALSEE----ESSVAH-S 87 (231)
T ss_pred --------------------CCCCCHHh-------------------------------ccCeecCCC----cChHHc-C
Confidence 23333332 667766554 445566 7
Q ss_pred CCCChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHH
Q 003466 190 GVVGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTIS 269 (818)
Q Consensus 190 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~ 269 (818)
..+..++|.+.++++.++ +|+||||||||+++|++......|+++.+++|||||++.++|++||+++
T Consensus 88 ~~i~~~~i~~~~~~l~~~-------------~D~VlVEGaGgl~~p~~~~~~~~d~~~~~~~pvilV~~~~lg~in~~lL 154 (231)
T PRK12374 88 CPINYTLMSNGLANLSEK-------------VDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALL 154 (231)
T ss_pred CcCCHHHHHHHHHHHHhh-------------CCEEEEECCCCcceeccCcccHHHHHHHhCCCEEEEECCCcChHHHHHH
Confidence 778889999999887655 9999999999999999888889999999999999999999999999999
Q ss_pred HHHHHHhCCCcEEEEEEccCCC------CCHHHHHHhhcCCCCEEe-cCCCCCCCcchhhhhhh
Q 003466 270 AYESLKLRGYDVVAVVFEDHGL------VNEVPLMSYLRNRVPVLV-LPPLPQDSSNDLMEWFD 326 (818)
Q Consensus 270 ~~~~l~~~~~~v~gvi~N~~~~------~~~~~l~~~~~~~~pvlg-iP~~~~~~~~~~~~~l~ 326 (818)
+.+.++.++++++|||+|++.+ ++.+.+++.. ++|++| ||+.+.+...++.+|++
T Consensus 155 t~~~l~~~~~~~~gvV~N~~~~~~~~~~~~~~~l~~~~--~~~~lg~iP~~~~~~~~~~~~~l~ 216 (231)
T PRK12374 155 TAQAIANDGLPLIGWVANRINPGLAHYAEIIDVLGKKL--PAPLIGELPYLPRAEQRELGQYID 216 (231)
T ss_pred HHHHHHhCCCcEEEEEEeCccCchhhhhhHHHHHHHhc--CCCEEEEeCCCCCCChHHHHhhcC
Confidence 9999999999999999999832 2345555555 899999 99998877555666653
No 91
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=4.6e-30 Score=290.87 Aligned_cols=298 Identities=12% Similarity=0.089 Sum_probs=220.9
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e 475 (818)
++|+|+| |+|||.+.||+|++|+++|++++++.. ..++.++.+.+|+++|++++|. ++++|++||++||+
T Consensus 46 ~~~~~~s---n~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~---~~~~~~~SG~~An~ 119 (406)
T PRK13393 46 EVTVWCS---NDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK---EAALLFTSGYVSNW 119 (406)
T ss_pred cEEEeec---ccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC---CcEEEeCCcHHHHH
Confidence 9999999 899999659999999999999987632 2234467899999999999973 79999999999999
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
+|++...+.+ +.++|+++..|||++..++..++.+...
T Consensus 120 ~ai~~l~~~~--------------------~g~~I~~~~~~H~s~~~~~~~~g~~~~~---------------------- 157 (406)
T PRK13393 120 AALSTLGSRL--------------------PGCVILSDELNHASMIEGIRHSRAEKRI---------------------- 157 (406)
T ss_pred HHHHHhhcCC--------------------CCCEEEEccchhHHHHHHHHHcCCeEEE----------------------
Confidence 9999541211 2368999999999998887665422100
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
++|+|. +.+++.++. ..+.++++|++|++ ++.+|.
T Consensus 158 ----------------------~~~~d~------------------~~l~~~l~~----~~~~~~~~v~~~~v-~~~~G~ 192 (406)
T PRK13393 158 ----------------------FRHNDP------------------ADLERKLSD----LDPHRPKLVAFESV-YSMDGD 192 (406)
T ss_pred ----------------------eCCCCH------------------HHHHHHHHh----ccCCCCEEEEEcCC-CCCCCc
Confidence 013442 344555542 12346789999998 899999
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeeccc-Cc-ccCCccchhcccCCC--CcEE--Eeccccc--CCccccceeecchHH
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFT-GF-WRLGVETTADLLGCV--PDIA--CYGKLLT--GGVIPLAATLATNAV 707 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~T-Gf-GRtG~~~a~e~~gv~--PDiv--tlgKgLg--gGy~PlsAvl~~~~i 707 (818)
+.+ +++|+++|++||+++|+||+|+ |+ |++|.++. +++++. +|++ +|||++| ||| +++++++
T Consensus 193 ~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~-~~~~~~~~~~i~~~tlsKa~g~~GG~-----~~~~~~~ 262 (406)
T PRK13393 193 IAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIA-EREGLADRLTIIEGTLAKAFGVMGGY-----ITGSAAL 262 (406)
T ss_pred hhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchh-hhcCCCCCCeEEEEeCchhhcccCce-----eeCCHHH
Confidence 887 9999999999999999999997 76 89997664 777775 6887 9999998 665 6778887
Q ss_pred HhhccCCh--------H-------------HH-------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccC
Q 003466 708 FDSFVGDS--------K-------------LW-------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNA 753 (818)
Q Consensus 708 ~~~l~~~~--------~-------------~~-------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~ 753 (818)
++.+.... . .+ .+.+.+.+++.+ ...+++.|.++.+.+.+.
T Consensus 263 ~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~i~~v~~~~~---- 337 (406)
T PRK13393 263 CDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG-IPHLPNPSHIVPVMVGDP---- 337 (406)
T ss_pred HHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCeEEEEeCCH----
Confidence 76543210 0 00 011233343332 223467888888865321
Q ss_pred CCchHHHHHHHHHHHh-CCceEeec-------C-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 754 GYGSLYAASLLKKLRE-DGVYMRPL-------G-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 754 ~~~~~~a~~~~~~l~e-~Gvlv~p~-------g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
..+..+++.|++ +||++++. | +++|++|++.+|++|+|+++++|+++++++.
T Consensus 338 ----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~~ 398 (406)
T PRK13393 338 ----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARLG 398 (406)
T ss_pred ----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhcC
Confidence 346778899987 59999751 3 7899999999999999999999999987764
No 92
>PRK00090 bioD dithiobiotin synthetase; Reviewed
Probab=99.97 E-value=4.1e-30 Score=267.75 Aligned_cols=203 Identities=29% Similarity=0.381 Sum_probs=169.4
Q ss_pred eEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCC---CCchHHHHHhccCCccccCCCcccccccc
Q 003466 39 TFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPH---DSDSRFLFTKLPSLSLRRNFPSSLILSNS 115 (818)
Q Consensus 39 ~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (818)
.|||+||+|++|||+||++|+++|+ ++|++|+|||||++|... +.|..++.+.+ ++
T Consensus 1 ~i~I~~t~t~~GKT~vs~~L~~~l~-----~~g~~v~~~KPv~~g~~~~~~~~d~~~~~~~~-~~--------------- 59 (222)
T PRK00090 1 RLFVTGTDTDVGKTVVTAALAQALR-----EAGYSVAGYKPVQSGCEETDRNGDALALQRLS-GL--------------- 59 (222)
T ss_pred CEEEEeCCCCcCHHHHHHHHHHHHH-----HcCCceEEEeeEecCCCCCCCcHHHHHHHHHc-CC---------------
Confidence 4899999999999999999999994 899999999999998652 34677666553 22
Q ss_pred hhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCCChh
Q 003466 116 ILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVVGDS 195 (818)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~~~~ 195 (818)
+.++ ..++++.|.+|+||++++..+ +..+..+
T Consensus 60 ----------------~~~~-------------------------------~~~~~~~~~~~~sp~~a~~~~-~~~~~~~ 91 (222)
T PRK00090 60 ----------------PLDY-------------------------------EDVNPYRFEEPLSPHLAAALE-GVAIDLE 91 (222)
T ss_pred ----------------CCCh-------------------------------hhcCceeeCCCCCHHHHHHHh-CCCCCHH
Confidence 1111 226789999999999999988 8788899
Q ss_pred HHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHH
Q 003466 196 KVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLK 275 (818)
Q Consensus 196 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~ 275 (818)
++.+.++++.++ +|++||||+||+.+|...+.+++|+++.+++|||+|++.+++++++++.+++.++
T Consensus 92 ~i~~~~~~l~~~-------------~D~viIEg~gg~~~~~~~~~~~adl~~~l~~pvilV~~~~~~~i~~~~~~i~~l~ 158 (222)
T PRK00090 92 KISAALRRLAQQ-------------YDLVLVEGAGGLLVPLTEDLTLADLAKQLQLPVILVVGVKLGCINHTLLTLEAIR 158 (222)
T ss_pred HHHHHHHHHHhh-------------CCEEEEECCCceeccCCCCCcHHHHHHHhCCCEEEEECCCCcHHHHHHHHHHHHH
Confidence 999999886655 9999999999999998777899999999999999999999999999999999999
Q ss_pred hCCCcEEEEEEccCCCC-------CHHHHHHhhcCCCCEEe-cCCCCCCCcchhhhhh
Q 003466 276 LRGYDVVAVVFEDHGLV-------NEVPLMSYLRNRVPVLV-LPPLPQDSSNDLMEWF 325 (818)
Q Consensus 276 ~~~~~v~gvi~N~~~~~-------~~~~l~~~~~~~~pvlg-iP~~~~~~~~~~~~~l 325 (818)
.+++++.|+|+|++... +.+.+++.+ ++|++| ||+++......+.+++
T Consensus 159 ~~~~~i~gvIlN~~~~~~~~~~~~~~~~l~~~~--gi~vlg~ip~~~~~~~~~~~~~~ 214 (222)
T PRK00090 159 ARGLPLAGWVANGIPPEPGLRHAENLATLERLL--PAPLLGELPYLAEAELAAAAEYL 214 (222)
T ss_pred HCCCCeEEEEEccCCCcchhHHHHHHHHHHHHc--CCCeEEecCCCCCcchHHHHhhC
Confidence 99999999999998432 455666666 999999 9997664433444443
No 93
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.97 E-value=1.9e-29 Score=285.67 Aligned_cols=311 Identities=9% Similarity=0.044 Sum_probs=229.4
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e 475 (818)
++|||+| |+|||.+.||+|++|+.+++++++... ..++.+..+.+|+++|+++++ .+.+++++||+.||.
T Consensus 103 ~~l~FsS---ndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g---~e~all~sSGy~AN~ 176 (476)
T PLN02955 103 KLLLFSG---NDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK---KEDCLVCPTGFAANM 176 (476)
T ss_pred eEEEeec---cCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC---CCcEEEECChHHHHH
Confidence 8999999 999999889999999999999998643 334567899999999999998 479999999999999
Q ss_pred HHHHHHHHHhhh---cccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCc
Q 003466 476 IALKMAFRKFSF---DHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPT 552 (818)
Q Consensus 476 ~ALklA~r~~t~---~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~ 552 (818)
+++... -.... ..+. ...++..+|..|...|.+...++.++....- .
T Consensus 177 ~~i~aL-~~~~~~~~~~~~----------~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~-a------------------ 226 (476)
T PLN02955 177 AAMVAI-GSVASLLAASGK----------PLKNEKVAIFSDALNHASIIDGVRLAERQGN-V------------------ 226 (476)
T ss_pred HHHHHH-hhcccccccccc----------ccCCCCcEEEEeccchHHHHHHHHhccccCC-c------------------
Confidence 999865 10000 0000 0023567899999999999998887632100 0
Q ss_pred ccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccC
Q 003466 553 VFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAA 632 (818)
Q Consensus 553 ~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~ 632 (818)
..+. +.|||+ +.|++.|+. ..++.+.||+|+| .++
T Consensus 227 -------~~~~--------------f~HND~------------------~~Le~~L~~-----~~~~~~~Vv~EgV-~Sm 261 (476)
T PLN02955 227 -------EVFV--------------YRHCDM------------------YHLNSLLSS-----CKMKRKVVVTDSL-FSM 261 (476)
T ss_pred -------eEEE--------------eCCCCH------------------HHHHHHHHh-----CCCCceEEEEeCC-CCC
Confidence 0000 128886 678888864 2345678999998 899
Q ss_pred CCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc--cchhcccCCCCcE----EEeccccc--CCccccceeecc
Q 003466 633 GGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV--ETTADLLGCVPDI----ACYGKLLT--GGVIPLAATLAT 704 (818)
Q Consensus 633 gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~--~~a~e~~gv~PDi----vtlgKgLg--gGy~PlsAvl~~ 704 (818)
.|.+.| +++|+++|++||++||+||+| |+|+.|+ .+..+++|+.||+ .||||++| ||| ++++
T Consensus 262 dGdiap----L~eL~~L~~~~ga~LiVDEAH-~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~GGf-----i~gs 331 (476)
T PLN02955 262 DGDFAP----MEELSQLRKKYGFLLVIDDAH-GTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHGGF-----IACS 331 (476)
T ss_pred CCCcCC----HHHHHHHHHHcCcEEEEcccc-cCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccCce-----eecH
Confidence 998887 999999999999999999999 6778888 5667899998876 69999999 887 8999
Q ss_pred hHHHhhccCChH---------------------H------HHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCch
Q 003466 705 NAVFDSFVGDSK---------------------L------WDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGS 757 (818)
Q Consensus 705 ~~i~~~l~~~~~---------------------~------~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~ 757 (818)
+++++.+...++ + .++++.++.+.+.......-...++.|.+.++
T Consensus 332 ~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~G~~~~sPI~pI~ig~~-------- 403 (476)
T PLN02955 332 KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALSGVDISSPIISLVVGNQ-------- 403 (476)
T ss_pred HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCH--------
Confidence 989888764332 1 11122222211111000000134455555433
Q ss_pred HHHHHHHHHHHhCCceEee--------cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 758 LYAASLLKKLREDGVYMRP--------LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 758 ~~a~~~~~~l~e~Gvlv~p--------~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
..+..++++|+++||++.+ +..++|++.++.||++||++++++|.++.+...
T Consensus 404 ~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 404 EKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 6788899999999999984 236899999999999999999999988866543
No 94
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.97 E-value=6.4e-29 Score=275.58 Aligned_cols=296 Identities=16% Similarity=0.126 Sum_probs=230.5
Q ss_pred CcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHHHhccCCCCCCcEEEeC
Q 003466 393 QKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELLLQGVGKGWASRAYFSD 468 (818)
Q Consensus 393 dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~ 468 (818)
+|+ +++||+| |++||.+.||+|++|+.+++++++... ...++++.+.+|+++|++++| .+++++++
T Consensus 37 ~~~----~~~nf~S---NdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g---~e~al~f~ 106 (388)
T COG0156 37 DGR----KVLNFCS---NDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG---AEAALLFS 106 (388)
T ss_pred CCc----eeEeeec---cCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEc
Confidence 477 9999999 999999989999999999999986543 235678999999999999998 47999999
Q ss_pred ChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCccc
Q 003466 469 NGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFL 548 (818)
Q Consensus 469 SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~ 548 (818)
||+.||.+++... .++.++|..|.-.|.+...++.+++...+++
T Consensus 107 SGy~AN~~~i~~l----------------------~~~~dli~~D~lnHASiidG~rls~a~~~~f-------------- 150 (388)
T COG0156 107 SGFVANLGLLSAL----------------------LKKGDLIFSDELNHASIIDGIRLSRAEVRRF-------------- 150 (388)
T ss_pred ccchhHHHHHHHh----------------------cCCCcEEEEechhhhhHHHHHHhCCCcEEEe--------------
Confidence 9999999999977 4457899999999999999999987664332
Q ss_pred CCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccc
Q 003466 549 DPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPV 628 (818)
Q Consensus 549 ~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV 628 (818)
.|||+ ++||+.|++.. ..++ +-..|++|.|
T Consensus 151 ------------------------------~HnD~------------------~~Le~~l~~~~-~~~~-~~~~IvtegV 180 (388)
T COG0156 151 ------------------------------KHNDL------------------DHLEALLEEAR-ENGA-RRKLIVTEGV 180 (388)
T ss_pred ------------------------------cCCCH------------------HHHHHHHHhhh-ccCC-CceEEEEecc
Confidence 17775 67888887521 0122 5679999998
Q ss_pred cccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc--cchhcccCCCCc---E--EEeccccc--CCccccc
Q 003466 629 VHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV--ETTADLLGCVPD---I--ACYGKLLT--GGVIPLA 699 (818)
Q Consensus 629 ~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~--~~a~e~~gv~PD---i--vtlgKgLg--gGy~Pls 699 (818)
.+|.|.+.| |++|.+||++||+.|++||+| |+|-.|+ .+.++++|+.|+ | .||||+|| |||
T Consensus 181 -fSMdGdiAp----L~~l~~L~~ky~a~L~VDEAH-a~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~---- 250 (388)
T COG0156 181 -FSMDGDIAP----LPELVELAEKYGALLYVDEAH-AVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGY---- 250 (388)
T ss_pred -ccCCCCcCC----HHHHHHHHHHhCcEEEEEccc-cccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCce----
Confidence 899999888 999999999999999999999 6777775 445678899765 3 39999999 566
Q ss_pred eeecchHHHhhccCChH---------------------HH------HHHHHHHH-------HcCCCeeEEEeeeeEEEEE
Q 003466 700 ATLATNAVFDSFVGDSK---------------------LW------DLELIQQI-------SSHRTVQRVVALGTLCAIE 745 (818)
Q Consensus 700 Avl~~~~i~~~l~~~~~---------------------~~------~~~l~~~l-------~~~~~v~~vrg~Gl~~~ie 745 (818)
+++++.+.+++...++ .+ ++++.+.. ...+.. .....-.++.+.
T Consensus 251 -v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~~-~~~s~s~I~pv~ 328 (388)
T COG0156 251 -IAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGLV-LLPSESPIIPVI 328 (388)
T ss_pred -eeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCc-cCCCCCCeeeeE
Confidence 9999999999877644 11 11111111 111111 112223345555
Q ss_pred EecCcccCCCchHHHHHHHHHHHhCCceEee-------c-CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 746 LQAAGCNAGYGSLYAASLLKKLREDGVYMRP-------L-GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 746 l~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p-------~-g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
+.++ ..+..++..|+++||++.+ . ..+||+++++.||++||++++++|.+.
T Consensus 329 ~gd~--------~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 329 LGDE--------ERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eCCH--------HHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 5543 6788999999999999984 2 389999999999999999999998764
No 95
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=1.7e-28 Score=283.22 Aligned_cols=324 Identities=13% Similarity=0.112 Sum_probs=225.1
Q ss_pred EEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC----CCCCChhHHHHHHHH
Q 003466 377 TVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF----PENVYEPALECAELL 452 (818)
Q Consensus 377 ~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~----~~~~~~~~~eLae~L 452 (818)
.++.++.|. +++ .+|+ +||||.|+ +++|+..||+|++|+++++++++..+. ..++++.+.+|+++|
T Consensus 94 ~~~~~~~G~--~i~-~~G~----~~id~~s~---~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~L 163 (481)
T PLN02822 94 PVLESAAGP--HTI-INGK----DVVNFASA---NYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKI 163 (481)
T ss_pred CceecCCCC--eEE-ECCc----eEEEeECC---CcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHH
Confidence 377788887 567 7999 99999984 456664499999999999999876322 235678999999999
Q ss_pred HhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCC
Q 003466 453 LQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPY 532 (818)
Q Consensus 453 ~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~ 532 (818)
+++++.+ +.++|+ +|+.++.+|++.. .++.++|.++..||+++..++.+++....
T Consensus 164 a~~~~~~--~~i~~s-~G~~a~~sai~a~----------------------~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~ 218 (481)
T PLN02822 164 AKFLGTP--DSILYS-YGLSTIFSVIPAF----------------------CKKGDIIVADEGVHWGIQNGLYLSRSTIV 218 (481)
T ss_pred HHHhCCC--CEEEEC-CHHHHHHHHHHHh----------------------CCCCCEEEEeCCccHHHHHHHHHcCCeEE
Confidence 9999853 456665 5666888887744 23457888999999998887777753211
Q ss_pred CCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCC
Q 003466 533 TGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNP 612 (818)
Q Consensus 533 ~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~ 612 (818)
. +.|||. +.++..+++..
T Consensus 219 ~--------------------------------------------~~~nd~------------------~~l~~~l~~~~ 236 (481)
T PLN02822 219 Y--------------------------------------------FKHNDM------------------ESLRNTLEKLT 236 (481)
T ss_pred E--------------------------------------------ECCCCH------------------HHHHHHHHHHh
Confidence 0 115553 12223332110
Q ss_pred CC-CCCCcE-EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc--CcccCCccchhcccCC---CCcEE
Q 003466 613 GL-KVSGCI-GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT--GFWRLGVETTADLLGC---VPDIA 685 (818)
Q Consensus 613 ~~-~~~~~i-AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T--GfGRtG~~~a~e~~gv---~PDiv 685 (818)
.. ....++ ++||+|++ +++.|.+.+ +++|+++|++||++||+||+|+ .+|++|.+ .++++|+ .|||+
T Consensus 237 ~~~~~~~~~~~~Ivve~i-~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~~v~~~~~dii 310 (481)
T PLN02822 237 AENKRKKKLRRYIVVEAI-YQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG-LSEHFGVPIEKIDII 310 (481)
T ss_pred hhhcccCCCcEEEEEecC-CCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCC-hHHHcCCCCCCCeEE
Confidence 00 001234 89999998 888998887 8999999999999999999998 56788876 5789998 78998
Q ss_pred E--eccccc--CCccccceeecchHHHhhccCChH---------------------HHH-------------HHHHHHHH
Q 003466 686 C--YGKLLT--GGVIPLAATLATNAVFDSFVGDSK---------------------LWD-------------LELIQQIS 727 (818)
Q Consensus 686 t--lgKgLg--gGy~PlsAvl~~~~i~~~l~~~~~---------------------~~~-------------~~l~~~l~ 727 (818)
+ |||++| ||| +++++++++.+..... .++ +.+.+.++
T Consensus 311 ~~s~sKalg~~GG~-----i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~ 385 (481)
T PLN02822 311 TAAMGHALATEGGF-----CTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLS 385 (481)
T ss_pred EecchhhhhhCCeE-----EEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 8 889998 775 8899999987653221 011 11223333
Q ss_pred cCCCeeEE-EeeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec----------CCEEEEECCCCChHHHHH
Q 003466 728 SHRTVQRV-VALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL----------GNVIYLMCGPCSSPEVCS 795 (818)
Q Consensus 728 ~~~~v~~v-rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~----------g~~ir~~ppl~~t~edId 795 (818)
+.+.+.-. -+.+.++.+.+........-+......+++.|+ ++||++.+. ...+|++.++.+|++||+
T Consensus 386 ~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~ 465 (481)
T PLN02822 386 DIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDIL 465 (481)
T ss_pred hcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHH
Confidence 33222111 134556666664220000012234677999998 889999963 136999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 003466 796 QLLLKLYQRLEEF 808 (818)
Q Consensus 796 ~~~~~l~~~l~~l 808 (818)
+++++|++++.++
T Consensus 466 ~~~~~l~~~~~~~ 478 (481)
T PLN02822 466 KASESLKRVAASV 478 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987664
No 96
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=3.1e-28 Score=275.47 Aligned_cols=300 Identities=15% Similarity=0.146 Sum_probs=217.4
Q ss_pred CcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC----CCCCChhHHHHHHHHHhccCCCCCCcEEEeC
Q 003466 393 QKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQGVGKGWASRAYFSD 468 (818)
Q Consensus 393 dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~----~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~ 468 (818)
+|+ ++++|.| |+|||.+.||+|++|+++|++++++... ..+.++.+.+|+++|+++++. +++++++
T Consensus 43 ~~~----~~~~~~s---n~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~---~~~l~~~ 112 (402)
T TIGR01821 43 GAK----DVTVWCS---NDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK---ESALVFT 112 (402)
T ss_pred CCe----eEEEeEc---cCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC---CeEEEEC
Confidence 457 9999999 9999998899999999999999876431 234578899999999999973 6789999
Q ss_pred ChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCccc
Q 003466 469 NGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFL 548 (818)
Q Consensus 469 SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~ 548 (818)
||++||+.|++++. .+ .+..+|..+..||+++..++..++.+...
T Consensus 113 sG~~an~~ai~~l~-~~-------------------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~--------------- 157 (402)
T TIGR01821 113 SGYVANDATLATLA-KI-------------------IPGCVIFSDELNHASMIEGIRHSGAEKFI--------------- 157 (402)
T ss_pred chHHHHHHHHHHhh-CC-------------------CCCCEEEEcchHhHHHHHHHHHcCCeEEE---------------
Confidence 99999999999882 11 02367888888999887776655432100
Q ss_pred CCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccc
Q 003466 549 DPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPV 628 (818)
Q Consensus 549 ~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV 628 (818)
++|+|. +.+++.++. ..++++++|++|++
T Consensus 158 -----------------------------~~~~d~------------------~~l~~~l~~----~~~~~~~~v~~e~~ 186 (402)
T TIGR01821 158 -----------------------------FRHNDV------------------AHLEKLLQS----VDPNRPKIIAFESV 186 (402)
T ss_pred -----------------------------ECCCCH------------------HHHHHHHHh----ccCCCCeEEEEcCC
Confidence 013432 345566653 12346789999998
Q ss_pred cccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-C-cccCCccchhcccCC--CCcEE--Eeccccc--CCccccce
Q 003466 629 VHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-G-FWRLGVETTADLLGC--VPDIA--CYGKLLT--GGVIPLAA 700 (818)
Q Consensus 629 ~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-G-fGRtG~~~a~e~~gv--~PDiv--tlgKgLg--gGy~PlsA 700 (818)
++..|.+.+ +++|+++|++||++||+||+|+ | +|++|.+. .+++++ .||++ ||||++| |||
T Consensus 187 -~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~~GG~----- 255 (402)
T TIGR01821 187 -YSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGGI-AERDGLMHRIDIIEGTLAKAFGVVGGY----- 255 (402)
T ss_pred -CCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCcc-chhccCCCCCeEEEEechhhhccCCce-----
Confidence 899998886 9999999999999999999997 5 35666533 466676 47887 9999998 665
Q ss_pred eecchHHHhhccCC----------hH-----------H------HH-------HHHHHHHHcCCCeeEEEeeeeEEEEEE
Q 003466 701 TLATNAVFDSFVGD----------SK-----------L------WD-------LELIQQISSHRTVQRVVALGTLCAIEL 746 (818)
Q Consensus 701 vl~~~~i~~~l~~~----------~~-----------~------~~-------~~l~~~l~~~~~v~~vrg~Gl~~~iel 746 (818)
+++++++++.+... .. . +. +.+.+.+++++. .-+...|.++.+.+
T Consensus 256 i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~i~~ 334 (402)
T TIGR01821 256 IAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALGI-PVIPNPSHIVPVII 334 (402)
T ss_pred eecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEe
Confidence 77888888765310 00 0 01 112333443322 11223566777755
Q ss_pred ecCcccCCCchHHHHHHHHHHHh-CCceEeec-------C-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 747 QAAGCNAGYGSLYAASLLKKLRE-DGVYMRPL-------G-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 747 ~~~~~~~~~~~~~a~~~~~~l~e-~Gvlv~p~-------g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
... ..+..+++.|++ +||++++. + +++|++|++.+|++||++++++|+++++++
T Consensus 335 ~~~--------~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 335 GDA--------ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCH--------HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 321 346678888875 59999762 3 689999999999999999999999998765
No 97
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=4.3e-28 Score=274.64 Aligned_cols=298 Identities=15% Similarity=0.103 Sum_probs=215.3
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC----CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~----~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e 475 (818)
++|||+| |++||++.||+|++|+.++++++++... ..+.++.+.+|+++|+++++. +++++++||++||+
T Consensus 47 ~~~~~~s---~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~---~~~~~~~sG~~an~ 120 (407)
T PRK09064 47 EVTVWCS---NDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK---EAALVFTSGYVSND 120 (407)
T ss_pred eEEEEEC---CCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC---CcEEEECcHHHHHH
Confidence 9999999 9999999899999999999999875321 123578899999999999873 67888999999999
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.|++++. .+ . +..+|..+..+|++...++...+.+...
T Consensus 121 ~ai~~l~-~~--~-----------------~~~~i~~~~~~h~s~~~~~~~~~~~~~~---------------------- 158 (407)
T PRK09064 121 ATLSTLA-KL--I-----------------PDCVIFSDELNHASMIEGIRRSRCEKHI---------------------- 158 (407)
T ss_pred HHHHHHh-CC--C-----------------CCCEEEEeCcchHHHHHHHHHcCCcEEE----------------------
Confidence 9999872 11 1 1357777777788776666554322100
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
++|+|+ +.+++.++. ..++++++|++|++ +++.|.
T Consensus 159 ----------------------~~~~d~------------------~~le~~l~~----~~~~~~~~v~~~~v-~s~~G~ 193 (407)
T PRK09064 159 ----------------------FRHNDV------------------AHLEELLAA----ADPDRPKLIAFESV-YSMDGD 193 (407)
T ss_pred ----------------------ECCCCH------------------HHHHHHHHh----ccCCCCeEEEEeCC-CCCCcc
Confidence 013442 456666653 12246789999998 899998
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeeccc-C-cccCCccchhcccCC--CCcEE--Eeccccc--CCccccceeecchHH
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFT-G-FWRLGVETTADLLGC--VPDIA--CYGKLLT--GGVIPLAATLATNAV 707 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~T-G-fGRtG~~~a~e~~gv--~PDiv--tlgKgLg--gGy~PlsAvl~~~~i 707 (818)
+.+ +++|+++|++||++||+||+|+ | ||++|.++ .+++++ .||++ ||||++| ||| +++++++
T Consensus 194 ~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~~GG~-----~~~~~~~ 263 (407)
T PRK09064 194 IAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGVMGGY-----IAGSAAL 263 (407)
T ss_pred ccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhccCce-----EecCHHH
Confidence 886 9999999999999999999998 7 69999865 566776 57988 9999998 665 7888888
Q ss_pred HhhccCC--------hH-------------HH-------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccC
Q 003466 708 FDSFVGD--------SK-------------LW-------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNA 753 (818)
Q Consensus 708 ~~~l~~~--------~~-------------~~-------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~ 753 (818)
++.+... +. .+ .+.+.+.+++.+. .-+...+.++.+.+...
T Consensus 264 ~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~iv~i~~~~~---- 338 (407)
T PRK09064 264 VDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAGI-PVMPNESHIVPVMVGDP---- 338 (407)
T ss_pred HHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEeCCH----
Confidence 7754311 00 00 0112333443321 11123355666655321
Q ss_pred CCchHHHHHHHHHHHh-CCceEeec-------C-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 754 GYGSLYAASLLKKLRE-DGVYMRPL-------G-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 754 ~~~~~~a~~~~~~l~e-~Gvlv~p~-------g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
..+..+++.|++ +||++++. + +++|++|++.+|++|+++++++|+++++++.
T Consensus 339 ----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~ 399 (407)
T PRK09064 339 ----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG 399 (407)
T ss_pred ----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 346778888875 59999752 2 6899999999999999999999999987653
No 98
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.95 E-value=2.3e-26 Score=259.52 Aligned_cols=313 Identities=13% Similarity=0.120 Sum_probs=209.6
Q ss_pred eecccccccccCCCCCCHHHHHHHHHhhhhcccccCC----CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHH
Q 003466 402 FDACASWWTQGPDATLQIELARDMGYTAARFGHVMFP----ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIA 477 (818)
Q Consensus 402 lD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~----~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~A 477 (818)
|||.| |++||.+.||++++|+.+++++++..+.. .+.+..+.+|+++|+++.+. +..++++||+.|+.++
T Consensus 1 ~~f~s---~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~---e~al~~~sG~~a~~~~ 74 (392)
T PLN03227 1 LNFAT---HDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT---ESAILYSDGASTTSST 74 (392)
T ss_pred CCCcC---cCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC---CcEEEecCcHHHHHHH
Confidence 57777 89999988999999999999998743311 22356899999999999984 5788889999999988
Q ss_pred HHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccC
Q 003466 478 LKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYN 557 (818)
Q Consensus 478 LklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 557 (818)
+... -+. .+.|..+...|+++..++.+++...
T Consensus 75 i~~l-----~~~-----------------GD~Vl~~~~~h~s~~~~~~l~~~~~-------------------------- 106 (392)
T PLN03227 75 VAAF-----AKR-----------------GDLLVVDRGVNEALLVGVSLSRANV-------------------------- 106 (392)
T ss_pred HHHh-----CCC-----------------CCEEEEeccccHHHHHHHHHcCCeE--------------------------
Confidence 7754 122 3456666677777766554432110
Q ss_pred cceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCC---CCCCcEEEEEEccccccCCC
Q 003466 558 SKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGL---KVSGCIGALIIEPVVHAAGG 634 (818)
Q Consensus 558 ~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~---~~~~~iAAVIvEPV~~g~gG 634 (818)
.. +.|||.+ .+ +.+.+.+...... ....+...|++||+ ++++|
T Consensus 107 ----~~--------------~~~~d~~----------~l-----~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v-~~~~G 152 (392)
T PLN03227 107 ----RW--------------FRHNDMK----------DL-----RRVLEQVRAQDVALKRKPTDQRRFLVVEGL-YKNTG 152 (392)
T ss_pred ----EE--------------eCCCCHH----------HH-----HHHHHHhhhhccccccccCCCcEEEEEcCC-cCCCC
Confidence 00 1144421 00 1111112100000 01235679999998 89999
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeeccc--CcccCCccchhcccCCCC----cEEEecccccCCcccc-ceeecchHH
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFT--GFWRLGVETTADLLGCVP----DIACYGKLLTGGVIPL-AATLATNAV 707 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~T--GfGRtG~~~a~e~~gv~P----DivtlgKgLggGy~Pl-sAvl~~~~i 707 (818)
.+++ +++++++|++||++||+||+|+ ++|++|. |+++++|+.| ||+++|++ .|+.|+ |++++++++
T Consensus 153 ~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~sls--k~~g~~gg~v~~~~~~ 225 (392)
T PLN03227 153 TLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLE--NAFGSVGGMTVGSEEV 225 (392)
T ss_pred cccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeech--hhhhccCcEEecCHHH
Confidence 9887 9999999999999999999997 4555665 6789999999 99988733 332245 456789888
Q ss_pred HhhccCCh----------H------------HH------------HHHHHHHHH--cCCCeeEEEee--------eeEEE
Q 003466 708 FDSFVGDS----------K------------LW------------DLELIQQIS--SHRTVQRVVAL--------GTLCA 743 (818)
Q Consensus 708 ~~~l~~~~----------~------------~~------------~~~l~~~l~--~~~~v~~vrg~--------Gl~~~ 743 (818)
++.+.... . .. .+.+.+.++ .++.+.++||. |.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~ 305 (392)
T PLN03227 226 VDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIY 305 (392)
T ss_pred HHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEE
Confidence 86553110 1 00 012333343 45667888884 45799
Q ss_pred EEEecCcccCCC-chHHHHHHHHHHHhCCceEeecC------------CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 744 IELQAAGCNAGY-GSLYAASLLKKLREDGVYMRPLG------------NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 744 iel~~~~~~~~~-~~~~a~~~~~~l~e~Gvlv~p~g------------~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+++.+......+ +...+..+++.|+++|+++.+.+ .+||++.++.||+||||+++++|+++++++.
T Consensus 306 i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 306 LRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred EEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 998653211111 11234688999999999997532 3567777777799999999999999998763
No 99
>PRK00784 cobyric acid synthase; Provisional
Probab=99.94 E-value=8.7e-27 Score=269.28 Aligned_cols=201 Identities=17% Similarity=0.081 Sum_probs=152.7
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCC--------CCCchHHHHHhccCCccccCCC
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYP--------HDSDSRFLFTKLPSLSLRRNFP 107 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~--------~~~d~~~~~~~~~~~~~~~~~~ 107 (818)
||++|||+||+||||||+||++|+++|+ ++|++|++||||++... +.+|..++++.+.++
T Consensus 1 m~~~ifItGT~T~vGKT~vt~~L~~~l~-----~~G~~v~~~Kpv~~~~~~~~~~dg~~~~Da~~l~~~~~~~------- 68 (488)
T PRK00784 1 MAKALMVQGTASDAGKSTLVAGLCRILA-----RRGYRVAPFKAQNMSLNSAVTADGGEIGRAQALQAEAAGV------- 68 (488)
T ss_pred CCceEEEEeCCCCCcHHHHHHHHHHHHH-----HCCCeEecccchhccccceECCCCCeeHHHHHHHHHhCCC-------
Confidence 5889999999999999999999999994 88999999999863211 123444444333221
Q ss_pred cccccccchhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHh-h
Q 003466 108 SSLILSNSILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAE-R 186 (818)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~-~ 186 (818)
.+ ...+||+.++ |.+|++++. .
T Consensus 69 -------------------------~~-------------------------------~~~i~P~~~~-~~sp~~a~~~~ 91 (488)
T PRK00784 69 -------------------------EP-------------------------------SVDMNPVLLK-PQSDRGSQVIV 91 (488)
T ss_pred -------------------------Cc-------------------------------hhccCCEEec-CCCCCcceEEE
Confidence 01 1226788664 788887652 1
Q ss_pred h-------------cCCCCChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCC-CcCC-CCCchhhHhhhCCC
Q 003466 187 E-------------SGGVVGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVA-SPGP-SGSLQCDLYRPFRL 251 (818)
Q Consensus 187 ~-------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~-~p~~-~~~~~~dla~~l~~ 251 (818)
+ .+..+..++|.+.++++.++ +|++||||+||++ .|+. .+.+++|||+.+++
T Consensus 92 ~g~~~~~l~a~~~~~~~~~~~~~I~~~~~~l~~~-------------~D~vIVEGaGg~~~~~L~~~~~~~~dlak~l~~ 158 (488)
T PRK00784 92 QGKPVGNMDARDYHDYKPRLLEAVLESLDRLAAE-------------YDVVVVEGAGSPAEINLRDRDIANMGFAEAADA 158 (488)
T ss_pred cCccccccCHHHHhhcchhhHHHHHHHHHHHHhc-------------CCEEEEECCCCccccCcccCCchhHHHHHHcCC
Confidence 1 03557788999999887655 9999999999999 5654 35789999999999
Q ss_pred CEEEEEcCCCC-hHHHHHHHHHHHHhC-CCcEEEEEEccCCCC------CHHHHHHhhcCCCCEEe-cCCCCCCCcch
Q 003466 252 PGILVGDGRLG-GISGTISAYESLKLR-GYDVVAVVFEDHGLV------NEVPLMSYLRNRVPVLV-LPPLPQDSSND 320 (818)
Q Consensus 252 pvilV~~~~~g-~i~~~~~~~~~l~~~-~~~v~gvi~N~~~~~------~~~~l~~~~~~~~pvlg-iP~~~~~~~~~ 320 (818)
|||||++.++| ++++++.+.+++..+ +++|+|||+|++..+ +.++|++.+ ++||+| ||+.+.+..+.
T Consensus 159 PVILV~~~~~g~~~~~i~~~~~~l~~~~~~~i~GvI~N~v~~~~~~~~~~~~~l~~~~--gipvLG~iP~~~~L~~~~ 234 (488)
T PRK00784 159 PVILVADIDRGGVFASLVGTLALLPPEERARVKGFIINKFRGDISLLEPGLDWLEELT--GVPVLGVLPYLDDLRLPA 234 (488)
T ss_pred CEEEEEeCCcCcHHHHHHHHHHhcChhhCCcEEEEEEECCCCCHHHHHHHHHHHHHhc--CCCEEEEcCCCcCCCcCh
Confidence 99999999998 488888888888754 479999999998532 233355555 999999 99999887554
No 100
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=1.6e-24 Score=245.61 Aligned_cols=305 Identities=13% Similarity=0.072 Sum_probs=209.8
Q ss_pred CeEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHH
Q 003466 375 AVTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAE 450 (818)
Q Consensus 375 ~~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae 450 (818)
.++++.++.|. +++|.+|+ +|||+. + ||+|++|+.+|+++++... ......+...+|++
T Consensus 44 ~~~~~~~~~g~--~~~~~~~~----~YL~l~----------~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~ 106 (407)
T PRK07179 44 KHLVLGKTPGP--DAIILQSN----DYLNLS----------G-HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEK 106 (407)
T ss_pred ceEEeecCCCC--cEEEeecC----CccCCC----------C-CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHH
Confidence 45566555555 68888888 888887 3 9999999999999874321 11122368899999
Q ss_pred HHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCC
Q 003466 451 LLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPS 530 (818)
Q Consensus 451 ~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~ 530 (818)
+|+++++. ++++|++||++||+.|++.+. ..| +.|..+.-.|.+...++...+..
T Consensus 107 ~la~~~g~---~~~~~~~sG~~An~~~l~~l~-----~~g-----------------~~v~~~~~~h~s~~~~~~~~g~~ 161 (407)
T PRK07179 107 KLAAFTGF---ESCLLCQSGWAANVGLLQTIA-----DPN-----------------TPVYIDFFAHMSLWEGVRAAGAQ 161 (407)
T ss_pred HHHHHhCC---CcEEEECCHHHHHHHHHHHhC-----CCC-----------------CEEEEECCcCHHHHHHHHHCCCe
Confidence 99999873 678999999999999999761 111 23344555665543333222111
Q ss_pred CCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhc
Q 003466 531 PYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQ 610 (818)
Q Consensus 531 ~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~ 610 (818)
.++ +.++|+ +.+++.+++
T Consensus 162 ------------------------------~~~--------------~~~~d~------------------~~l~~~l~~ 179 (407)
T PRK07179 162 ------------------------------AHP--------------FRHNDV------------------DHLRRQIER 179 (407)
T ss_pred ------------------------------EEE--------------ecCCCH------------------HHHHHHHHh
Confidence 000 013442 556677752
Q ss_pred CCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccC--cccCCccchhcccCCC--CcEEE
Q 003466 611 NPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTG--FWRLGVETTADLLGCV--PDIAC 686 (818)
Q Consensus 611 ~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TG--fGRtG~~~a~e~~gv~--PDivt 686 (818)
.+.++|++|++ ++..|.+.| +++|+++|++||++||+||+|+. +|++|..+ .+.+|+. +|+++
T Consensus 180 -------~~~~lV~v~~v-~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~vdi~~ 246 (407)
T PRK07179 180 -------HGPGIIVVDSV-YSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGL-VAELGLTSRVHFIT 246 (407)
T ss_pred -------cCCeEEEECCC-CCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHhcCCCCCCCEEE
Confidence 23578999998 899999887 89999999999999999999962 34555543 4567774 48864
Q ss_pred --ecccccCCccccceeecchHHHhhccC--------ChH-------------HH-------------HHHHHHHHHcCC
Q 003466 687 --YGKLLTGGVIPLAATLATNAVFDSFVG--------DSK-------------LW-------------DLELIQQISSHR 730 (818)
Q Consensus 687 --lgKgLggGy~PlsAvl~~~~i~~~l~~--------~~~-------------~~-------------~~~l~~~l~~~~ 730 (818)
++|++|+ ++|++++++++++.+.. ... .+ .+.+.+.+.+.+
T Consensus 247 ~S~sK~~g~---~~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g 323 (407)
T PRK07179 247 ASLAKAFAG---RAGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELG 323 (407)
T ss_pred eechHhhhc---cCeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 7999975 48889999988776531 100 00 012333444443
Q ss_pred CeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEe----ec----CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 731 TVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMR----PL----GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 731 ~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~----p~----g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
. .+++.|.++.+++... ..+..+.+.|.++||++. |. .+.+|++++..+|++||++++++|+
T Consensus 324 ~--~v~~~~~i~~l~~~~~--------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~ 393 (407)
T PRK07179 324 Y--NIRSESQIIALETGSE--------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCR 393 (407)
T ss_pred C--CCCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 2 3456788888876432 235667888999999843 32 3789999999999999999999999
Q ss_pred HHHHHHH
Q 003466 803 QRLEEFD 809 (818)
Q Consensus 803 ~~l~~l~ 809 (818)
+++++.+
T Consensus 394 ~~~~~~~ 400 (407)
T PRK07179 394 EARDEVD 400 (407)
T ss_pred HHHHhhC
Confidence 9887754
No 101
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.92 E-value=3.7e-24 Score=220.63 Aligned_cols=310 Identities=16% Similarity=0.162 Sum_probs=226.7
Q ss_pred EEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHH
Q 003466 377 TVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELL 452 (818)
Q Consensus 377 ~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L 452 (818)
.|+.+.+|..+.+.-.++ .+|.|++ |+|||.+.||+|++|.++++++++... +.+++..++..|+.+|
T Consensus 50 rVi~s~q~p~i~v~G~~k-----~ilnFca---NnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~ki 121 (417)
T KOG1359|consen 50 RVITSRQGPTIQVKGSDK-----KILNFCA---NNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKI 121 (417)
T ss_pred eEEeecccceEEEecccc-----ceeeecc---cccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHH
Confidence 378888898655443343 6999998 999999889999999999999987543 5677899999999999
Q ss_pred HhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCC
Q 003466 453 LQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPY 532 (818)
Q Consensus 453 ~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~ 532 (818)
+++.+. +..++++|+.+||.+++-..+ . ..+-|..|.-.|.+.++++.+.. .|
T Consensus 122 Aqfh~r---ED~ilypscfdANag~feail-----~-----------------pedAvfSDeLNhASIIdGirLck--ry 174 (417)
T KOG1359|consen 122 AQFHGR---EDTILYPSCFDANAGAFEAIL-----T-----------------PEDAVFSDELNHASIIDGIRLCK--RY 174 (417)
T ss_pred HHHhCC---CceEEeccccccchHHHHHhc-----C-----------------hhhhhhccccccchhhhhhHHHh--hh
Confidence 999874 788899999999999998761 1 12557778889999988887763 11
Q ss_pred CCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCC
Q 003466 533 TGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNP 612 (818)
Q Consensus 533 ~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~ 612 (818)
+. -|. -.++..+..
T Consensus 175 ~h----------------------------------------------~dv------------------~~l~~~l~~-- 188 (417)
T KOG1359|consen 175 RH----------------------------------------------VDV------------------FDLEHCLIS-- 188 (417)
T ss_pred cc----------------------------------------------chh------------------HHHHHHHHH--
Confidence 11 110 112222221
Q ss_pred CCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-C-cccCCccchhcccCC--CCcEE--E
Q 003466 613 GLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-G-FWRLGVETTADLLGC--VPDIA--C 686 (818)
Q Consensus 613 ~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-G-fGRtG~~~a~e~~gv--~PDiv--t 686 (818)
.-..+...|++|.+ .++.|.+.| |++|.+|+++||+||.+||.|. | ||.||. +..|.+|+ ++||+ |
T Consensus 189 --a~k~r~klv~TDg~-FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGr-Gt~E~~~vm~~vdiinsT 260 (417)
T KOG1359|consen 189 --ACKMRLKLVVTDGV-FSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGR-GTAEEFGVMGDVDIINST 260 (417)
T ss_pred --hhhheEEEEEecce-eccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCC-ChHHHhCCCCcceehhhh
Confidence 22457889999998 788998888 9999999999999999999985 4 366664 44578887 57776 9
Q ss_pred eccccc---CCccccceeecchHHHhhccCChH----------------------HHH--------HHHHHHHHcCCCee
Q 003466 687 YGKLLT---GGVIPLAATLATNAVFDSFVGDSK----------------------LWD--------LELIQQISSHRTVQ 733 (818)
Q Consensus 687 lgKgLg---gGy~PlsAvl~~~~i~~~l~~~~~----------------------~~~--------~~l~~~l~~~~~v~ 733 (818)
+||++| ||| +.+++++++.+++.++ ++. +...+++++.-...
T Consensus 261 LgKAlGga~GGy-----ttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 261 LGKALGGASGGY-----TTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred hhhhhcCCCCCC-----ccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999 466 8999999988876654 000 00111111111111
Q ss_pred EEEeee---eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee--------cCCEEEEECCCCChHHHHHHHHHHHH
Q 003466 734 RVVALG---TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP--------LGNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 734 ~vrg~G---l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p--------~g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
.+.-.| .+..+.+.+ ..++..+++.|+.+|+++.. +..+||+..++.||+||||++++++.
T Consensus 336 GftIsg~~hPI~pv~lGd--------a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~ 407 (417)
T KOG1359|consen 336 GFTISGASHPICPVMLGD--------ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFS 407 (417)
T ss_pred CceecCCCCCccceeccc--------HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHH
Confidence 122223 334444443 37899999999999999973 34899999999999999999999999
Q ss_pred HHHHHH
Q 003466 803 QRLEEF 808 (818)
Q Consensus 803 ~~l~~l 808 (818)
++.+-+
T Consensus 408 ~vgr~~ 413 (417)
T KOG1359|consen 408 EVGRFL 413 (417)
T ss_pred HHHHhh
Confidence 887654
No 102
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=1e-23 Score=239.31 Aligned_cols=302 Identities=13% Similarity=0.094 Sum_probs=207.8
Q ss_pred CcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHHHhccCCCCCCcEEEeC
Q 003466 393 QKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELLLQGVGKGWASRAYFSD 468 (818)
Q Consensus 393 dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~ 468 (818)
+|+ ++++|.| |+++|.+.||+|++|+.++++++++.. .....++.+.+|+++|++++|. +.+++++
T Consensus 44 ~~~----~~~~~~s---n~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~---~~~i~~~ 113 (410)
T PRK13392 44 GPR----RVTIWCS---NDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK---ESALLFT 113 (410)
T ss_pred CCc----eEEEEEC---CCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC---CCEEEEC
Confidence 467 8999998 899999779999999999999987532 1122355789999999999983 5788889
Q ss_pred ChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCccc
Q 003466 469 NGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFL 548 (818)
Q Consensus 469 SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~ 548 (818)
||++||+.+++...+. . + .++|..+..+|+++..++..+|.....
T Consensus 114 sG~~a~~~~i~~l~~~---~---------------~--g~~vi~~~~~h~s~~~~~~~~g~~~~~--------------- 158 (410)
T PRK13392 114 SGYVSNDAALSTLGKL---L---------------P--GCVILSDALNHASMIEGIRRSGAEKQV--------------- 158 (410)
T ss_pred cHHHHHHHHHHHHhcC---C---------------C--CCEEEEehhhhHHHHHHHHHcCCeEEE---------------
Confidence 9999999999955111 1 1 246777788999887766555432100
Q ss_pred CCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccc
Q 003466 549 DPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPV 628 (818)
Q Consensus 549 ~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV 628 (818)
++ ++|. +.+++.++. ...+++.+|++|++
T Consensus 159 ---------------~~--------------~~d~------------------~~l~~~l~~----~~~~~t~~v~i~~~ 187 (410)
T PRK13392 159 ---------------FR--------------HNDL------------------ADLEEQLAS----VDPDRPKLIAFESV 187 (410)
T ss_pred ---------------Ee--------------CCCH------------------HHHHHHHHh----ccCCCCEEEEEeCC
Confidence 00 2221 223444442 12346789999998
Q ss_pred cccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-Cc-ccCCccchhcccCC--CCcEE--EecccccCCccccceee
Q 003466 629 VHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GF-WRLGVETTADLLGC--VPDIA--CYGKLLTGGVIPLAATL 702 (818)
Q Consensus 629 ~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-Gf-GRtG~~~a~e~~gv--~PDiv--tlgKgLggGy~PlsAvl 702 (818)
++..|.+.+ +++|+++|++||+++|+||+|+ |+ |+.|.++ .++.++ .+|++ +++|++|+ +.|.++
T Consensus 188 -~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~---~GG~~~ 258 (410)
T PRK13392 188 -YSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGC---LGGYIA 258 (410)
T ss_pred -CCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhc---ccchhh
Confidence 899998886 9999999999999999999998 54 6777654 355565 57877 99999863 113367
Q ss_pred cchHHHhhccCCh-----------H-------HH----------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEec
Q 003466 703 ATNAVFDSFVGDS-----------K-------LW----------------DLELIQQISSHRTVQRVVALGTLCAIELQA 748 (818)
Q Consensus 703 ~~~~i~~~l~~~~-----------~-------~~----------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~ 748 (818)
+++++++.+.... . .+ .+.+.+.++..+. .-....+.++.+.+..
T Consensus 259 ~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~i~~~~ 337 (410)
T PRK13392 259 ASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANGI-PVMPSPSHIVPVMVGD 337 (410)
T ss_pred cCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEeCC
Confidence 7888877443110 0 00 0112233333321 1122345555554432
Q ss_pred CcccCCCchHHHHHHHHHHH-hCCceEeec-------C-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 749 AGCNAGYGSLYAASLLKKLR-EDGVYMRPL-------G-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 749 ~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
. ..+..++++|+ ++||++.+. + ..+|+++++.+|++|+|+++++|+++++++
T Consensus 338 ~--------~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 338 P--------TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred H--------HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 1 34667888887 679999862 2 689999999999999999999999988765
No 103
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=99.91 E-value=8.9e-24 Score=210.20 Aligned_cols=165 Identities=28% Similarity=0.399 Sum_probs=140.6
Q ss_pred EEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCC-CCchHHHHHhccCCccccCCCcccccccchhhh
Q 003466 41 QIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPH-DSDSRFLFTKLPSLSLRRNFPSSLILSNSILFS 119 (818)
Q Consensus 41 ~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (818)
||+||++|+|||+++++|+++|. ++|++|++|||++++... +.|..++.+.+ +.
T Consensus 1 fI~~t~~~~GKT~va~~L~~~l~-----~~g~~V~~~kP~~~~~~~~d~d~~~i~~~~-~~------------------- 55 (166)
T TIGR00347 1 FVTGTDTGVGKTVASSALAAKLK-----KAGYSVGYYKPVQTGIEKTNSDALLLQNIS-GT------------------- 55 (166)
T ss_pred CeecCCCCccHHHHHHHHHHHHH-----HCCCcEEEEEeeeeCCCCCchHHHHHHHHc-CC-------------------
Confidence 79999999999999999999994 899999999999998653 45566665543 11
Q ss_pred hHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCCChhHHHH
Q 003466 120 SLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVVGDSKVIE 199 (818)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~~~~~i~~ 199 (818)
..++ ...+++.+..|.+|+++...+ +.....+.+.+
T Consensus 56 ------------~~~~-------------------------------~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~i~~ 91 (166)
T TIGR00347 56 ------------ALDW-------------------------------DEVNPYAFALPLSPHIAADQE-GRPIDLEELSK 91 (166)
T ss_pred ------------CCch-------------------------------hccCCeeeCCCCChHHHHHHh-CCCCCHHHHHH
Confidence 0111 124577888899999988876 66788888999
Q ss_pred HHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCC
Q 003466 200 TLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGY 279 (818)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~ 279 (818)
.++++.++ +|++||||+||+.+|+....+++|+++.+++|||||++.+.++++++..+.+.++.+++
T Consensus 92 ~~~~l~~~-------------~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~~~~~~~~~~~~~~~l~~~~~ 158 (166)
T TIGR00347 92 HLRTLEQK-------------YDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRVKLGTINHTLLTVEHARQTGL 158 (166)
T ss_pred HHHHHHhc-------------CCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECCCCcHHHHHHHHHHHHHHCCC
Confidence 99887655 99999999999999988788999999999999999999999999999999999999999
Q ss_pred cEEEEEEc
Q 003466 280 DVVAVVFE 287 (818)
Q Consensus 280 ~v~gvi~N 287 (818)
++.|+|+|
T Consensus 159 ~i~gvv~N 166 (166)
T TIGR00347 159 TLAGVILN 166 (166)
T ss_pred CeEEEEeC
Confidence 99999998
No 104
>TIGR00313 cobQ cobyric acid synthase CobQ.
Probab=99.91 E-value=2.7e-24 Score=247.18 Aligned_cols=194 Identities=17% Similarity=0.093 Sum_probs=140.3
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCC----CC----CchHHHHHhccCCccccCCCcccc
Q 003466 40 FQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYP----HD----SDSRFLFTKLPSLSLRRNFPSSLI 111 (818)
Q Consensus 40 ~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~----~~----~d~~~~~~~~~~~~~~~~~~~~~~ 111 (818)
|||+||+|+||||+||++||+.| + ++|++|+||||+++... .+ ++...++..++++
T Consensus 1 ~~I~GT~t~vGKT~v~~~L~~~l----~-~~G~~v~~fKp~~~~~~s~~~~~~~e~~~a~~~qa~a~~~----------- 64 (475)
T TIGR00313 1 IMVVGTTSSAGKSTLTAGLCRIL----A-RRGYRVAPFKSQNMSLNSFVTKEGGEIAIAQATQALAAGI----------- 64 (475)
T ss_pred CEEeeCCCCCCHHHHHHHHHHHH----H-hCCCeEEEECCcccccCccccCCCchhHHHHHHHHHhCCC-----------
Confidence 69999999999999999999999 4 89999999999853211 11 1222222222111
Q ss_pred cccchhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceeccc-------------cc
Q 003466 112 LSNSILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEE-------------AV 178 (818)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 178 (818)
.|. ..+||+.|+. |+
T Consensus 65 ---------------------~~~-------------------------------~~~nPv~lk~~~~~~s~~i~~g~~~ 92 (475)
T TIGR00313 65 ---------------------EPS-------------------------------VHMNPILLKPKGNFTSQVIVHGRAV 92 (475)
T ss_pred ---------------------Cch-------------------------------hccCCEEeCcCCCCcCcEEEcCccc
Confidence 111 1134444444 45
Q ss_pred ChHHHHhhhc-CCCCChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCC--cCCCCCchhhHhhhCCCCEEE
Q 003466 179 SPHLAAERES-GGVVGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVAS--PGPSGSLQCDLYRPFRLPGIL 255 (818)
Q Consensus 179 ~p~~a~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~--p~~~~~~~~dla~~l~~pvil 255 (818)
+|+.+.+... +..+.+++|.+.+.++.++ +|++|||||||+++ +...+.+++++|+.+++||||
T Consensus 93 ~~~~a~~~~~~~~~~~~~~i~~~~~~l~~~-------------~D~vIIEGaGGl~~~~~~~~d~s~~~lA~~l~apVIL 159 (475)
T TIGR00313 93 GDMNYQEYYKNKVDFFLKAIKESLEILARE-------------YDYVVIEGAGSPAEINLLKRDLANMRIAELANADAIL 159 (475)
T ss_pred CcCCHHHHhhhhhHHHHHHHHHHHHHHHhc-------------CCEEEEECCCCccccccCcCCchHHHHHHHhCCCEEE
Confidence 5665543321 3356788899999887655 99999999999987 244678999999999999999
Q ss_pred EEcCCCCh-HHHHHHHHHHHHhC-CCcEEEEEEccCCC------CCHHHHHHhhcCCCCEEe-cCCCCCC
Q 003466 256 VGDGRLGG-ISGTISAYESLKLR-GYDVVAVVFEDHGL------VNEVPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 256 V~~~~~g~-i~~~~~~~~~l~~~-~~~v~gvi~N~~~~------~~~~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
|++.++|+ +++++.+++.+... +..++|||+|++.. ++.++|++++ ++|||| +|+.+.+
T Consensus 160 V~d~~~g~~~a~i~gt~~~l~~~~~~~i~GvIlNrv~~~~~~~~~~~~~l~e~~--gipvLG~ip~~~~l 227 (475)
T TIGR00313 160 VADIDRGGVFASIYGTLKLLPENWRKLIKGIVINKFRGNVDVLKSGIEKLEELT--GIPVLGVLPYDENL 227 (475)
T ss_pred EEeCCccHHHHHHHHHHHHhChhhcCceEEEEEeccCCcHHHHHHHHHHHHHhh--CCCEEEEecCCCcC
Confidence 99999885 56777788887754 36899999999843 2344556666 999999 9998876
No 105
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated
Probab=99.91 E-value=7e-24 Score=241.39 Aligned_cols=175 Identities=13% Similarity=0.124 Sum_probs=133.7
Q ss_pred CCCCCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHhccCCccccCCCccccc
Q 003466 33 LPLSHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTKLPSLSLRRNFPSSLIL 112 (818)
Q Consensus 33 ~~~~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 112 (818)
+.-+|++|||+||+||+|||+||++|+++|+ ++ |.+||| |+ +..| ..
T Consensus 234 ~~~~~~~i~Iagt~Tg~GKT~vt~~L~~al~-----~~---v~~fK~---Gp-D~id------~~--------------- 280 (476)
T PRK06278 234 ERNKPKGIILLATGSESGKTFLTTSIAGKLR-----GK---VFVAKI---GP-DVRD------IV--------------- 280 (476)
T ss_pred hhcCCCeEEEEeCCCCCCHHHHHHHHHHHHH-----hC---eEEEcC---CC-Chhh------cC---------------
Confidence 3355889999999999999999999999993 33 999995 42 1111 00
Q ss_pred ccchhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCC-
Q 003466 113 SNSILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGV- 191 (818)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~- 191 (818)
...+.|++|+||+.++..+ ...
T Consensus 281 --------------------------------------------------------p~~~~~~~~~sp~~a~n~~-~d~~ 303 (476)
T PRK06278 281 --------------------------------------------------------PSLYLLREKMTKYNSIKIG-DRGW 303 (476)
T ss_pred --------------------------------------------------------CcceecccccCChHHHhhc-CCcc
Confidence 2357899999999999976 333
Q ss_pred CChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCC---CchhhHhhhCCCCEEEEEcCCCChHHHHH
Q 003466 192 VGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSG---SLQCDLYRPFRLPGILVGDGRLGGISGTI 268 (818)
Q Consensus 192 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~---~~~~dla~~l~~pvilV~~~~~g~i~~~~ 268 (818)
+..++..+.++. ..+|++|||||||+++|...+ .+++|||+.+++|||||++.++|+++|++
T Consensus 304 ~~~~~~~~~~~~---------------~~~DivIIEGagGL~dg~~~~~~~~S~adlAk~l~~PVILV~~~~~g~i~~~~ 368 (476)
T PRK06278 304 SDVEEFLEFVKN---------------SDYDYYIIEGVMGAFTGALNKKNPYSGAEIAKALGFPVYIVSSCSKSGIEGAF 368 (476)
T ss_pred cCHHHHHHHHHh---------------cCCCEEEEECCCCcccccCCCCccccHHHHHHHhCCCEEEEEcCCCChHHHHH
Confidence 555555554321 138999999999999995333 58899999999999999999999999998
Q ss_pred HHH----HHHHhCCCcEEEEEEccCC-CCCHHHHHHhhcC-CCCEEecCC
Q 003466 269 SAY----ESLKLRGYDVVAVVFEDHG-LVNEVPLMSYLRN-RVPVLVLPP 312 (818)
Q Consensus 269 ~~~----~~l~~~~~~v~gvi~N~~~-~~~~~~l~~~~~~-~~pvlgiP~ 312 (818)
.++ ++++.++++|+|||+|++. ..+.+.+++.++. ++||+|+|+
T Consensus 369 ~~i~G~~~~l~~~~i~i~GVIlN~v~~~~~~~~~~~~le~~gvpVLG~~~ 418 (476)
T PRK06278 369 VESMAYYSLLKKMGVKVEGIILNKVYNMEIFEKVKKIAENSNINLIGVGK 418 (476)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEECCCcHHHHHHHHHHHHhcCCCEEEecc
Confidence 854 5666778999999999994 3344455554443 999999654
No 106
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=9.9e-23 Score=228.68 Aligned_cols=314 Identities=10% Similarity=0.049 Sum_probs=209.4
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHH
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAEL 451 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~ 451 (818)
|.++.+++|. +|+ .+|+ +||||.+ ++++||..+|++++++.+++++++... ...+..+...+++++
T Consensus 17 ~~~~~~~~g~--~~~-~~g~----~~id~~~---~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~ 86 (385)
T TIGR01825 17 IRVLESAQGP--RVR-VNGK----EVINLSS---NNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEK 86 (385)
T ss_pred ccccccCCCc--eEE-ECCc----eEEEeec---cCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHH
Confidence 4567788887 688 8999 9999987 456899339999999999998764321 223457889999999
Q ss_pred HHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC
Q 003466 452 LLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP 531 (818)
Q Consensus 452 L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~ 531 (818)
+++..+. +..++.+||++|++.|++.+. . +.+.|..+..+|+....++.+.+...
T Consensus 87 l~~~~g~---~~~i~~~sG~~a~~~a~~~~~-----~-----------------~gd~vi~~~~~~~~~~~~~~~~g~~~ 141 (385)
T TIGR01825 87 LAKFKKT---EAALVFQSGFNTNQGVLSALL-----R-----------------KGDIVLSDELNHASIIDGLRLTKATK 141 (385)
T ss_pred HHHHhCC---CcEEEECcHHHHHHHHHHHhC-----C-----------------CCCEEEEEccccHHHHHHHHhcCCce
Confidence 9998873 467778899999999888651 1 12456677788887765554443210
Q ss_pred CCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcC
Q 003466 532 YTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQN 611 (818)
Q Consensus 532 ~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~ 611 (818)
.. .+ +.|. +.+++.+.+
T Consensus 142 ~~------------------------------~~--------------~~d~------------------~~l~~~l~~- 158 (385)
T TIGR01825 142 KI------------------------------YK--------------HADM------------------DDLDRVLRE- 158 (385)
T ss_pred EE------------------------------eC--------------CCCH------------------HHHHHHHHh-
Confidence 00 00 1121 334555542
Q ss_pred CCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-C-cccCCccchhcccCCCCc----EE
Q 003466 612 PGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-G-FWRLGVETTADLLGCVPD----IA 685 (818)
Q Consensus 612 ~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-G-fGRtG~~~a~e~~gv~PD----iv 685 (818)
....+.++|+++++ ++..|.+.+ +++|.++|++||+++|+||+++ | ++++|. +...++++.+| +.
T Consensus 159 ---~~~~~~~~v~~~~v-~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~ 229 (385)
T TIGR01825 159 ---NPSYGKKLIVTDGV-FSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGR-GTVHHFGLEDKVDIQVG 229 (385)
T ss_pred ---hccCCCeEEEEecC-CcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-ccHhhcCCCcCCcEEEE
Confidence 11246789999998 888887775 8999999999999999999995 3 555554 33455666665 36
Q ss_pred EecccccCCccccceeecchHHHhhccCC-------h-H-------------HHH-------------HHHHHHHHcCCC
Q 003466 686 CYGKLLTGGVIPLAATLATNAVFDSFVGD-------S-K-------------LWD-------------LELIQQISSHRT 731 (818)
Q Consensus 686 tlgKgLggGy~PlsAvl~~~~i~~~l~~~-------~-~-------------~~~-------------~~l~~~l~~~~~ 731 (818)
+++|++++ +.|.+++++++++.+... . . .+. +.+.+.+++.+.
T Consensus 230 s~sK~~~~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 306 (385)
T TIGR01825 230 TLSKAIGV---VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKLGY 306 (385)
T ss_pred eccHHhhc---CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999963 235578888887755211 0 0 010 011222322211
Q ss_pred eeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee-------cC-CEEEEECCCCChHHHHHHHHHHHHH
Q 003466 732 VQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP-------LG-NVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 732 v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p-------~g-~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
.-+...+.++.+.+... ..+..+++.|+++||++.+ .+ +++|++|++.++++||++++++|++
T Consensus 307 -~~~~~~~~~~~~~~~~~--------~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 307 -DTGGSETPITPVVIGDE--------KAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred -CCCCCCCCEEEEEECCH--------HHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 11112233444443211 2356789999999999853 13 7899999999999999999999999
Q ss_pred HHHHH
Q 003466 804 RLEEF 808 (818)
Q Consensus 804 ~l~~l 808 (818)
+++++
T Consensus 378 ~~~~~ 382 (385)
T TIGR01825 378 VGKEL 382 (385)
T ss_pred HHHHh
Confidence 88654
No 107
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=7.5e-23 Score=229.29 Aligned_cols=300 Identities=14% Similarity=0.045 Sum_probs=201.7
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc-------cccCC----CCCChhHHHHHHHHHhccCCCCCCcEEEeC
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG-------HVMFP----ENVYEPALECAELLLQGVGKGWASRAYFSD 468 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~-------~~~~~----~~~~~~~~eLae~L~~~~~~~~l~~v~f~~ 468 (818)
++|||.| |+|||++.||++.+++.+++.+++ ..... .+.++.+.+++++|+++++. +.+++++
T Consensus 5 ~~~~~~s---~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~---~~~l~~~ 78 (370)
T PRK05937 5 LSIDFVT---NDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA---PEAFIVP 78 (370)
T ss_pred ceEEeEC---CCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC---CeEEEEC
Confidence 7899999 999999989999999999998872 22211 22568899999999999984 5789999
Q ss_pred ChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCccc
Q 003466 469 NGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFL 548 (818)
Q Consensus 469 SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~ 548 (818)
||+.||.+.+.. + .++.++|.++..+|+++..++...... .
T Consensus 79 sG~~a~~~~~~~----~------------------~~~~d~ii~d~~~H~sv~~~~~~~~~~--~--------------- 119 (370)
T PRK05937 79 SGYMANLGLCAH----L------------------SSVTDYVLWDEQVHISVVYSLSVISGW--H--------------- 119 (370)
T ss_pred ChHHHHHHHHHH----h------------------CCCCCEEEEEhhhhHHHHHHHHHcCCc--e---------------
Confidence 999999643332 1 123479999999999998877653210 0
Q ss_pred CCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccc
Q 003466 549 DPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPV 628 (818)
Q Consensus 549 ~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV 628 (818)
+.+| |+|+ +.+++.|+... ....+..+|+++++
T Consensus 120 -------------~~~~--------------~~d~------------------~~l~~~l~~~~--~~~~~~~~v~v~~v 152 (370)
T PRK05937 120 -------------QSFR--------------HNDL------------------DHLESLLESCR--QRSFGRIFIFVCSV 152 (370)
T ss_pred -------------EEec--------------CCCH------------------HHHHHHHHhhh--ccCCCcEEEEEecC
Confidence 0011 4543 45666665310 11133457889998
Q ss_pred cccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-C-cccCCccchhcccC---CCCcEEEecccccCCccccceeec
Q 003466 629 VHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-G-FWRLGVETTADLLG---CVPDIACYGKLLTGGVIPLAATLA 703 (818)
Q Consensus 629 ~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-G-fGRtG~~~a~e~~g---v~PDivtlgKgLggGy~PlsAvl~ 703 (818)
+++.|.+.| +++|.++|+++|++||+||+|+ | +|++|+++.. .++ +.+|+.|+||++|+. .+++++
T Consensus 153 -~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~-~~~~~~~~~~~~tlsK~~g~~---G~~vl~ 223 (370)
T PRK05937 153 -YSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCH-SLGYENFYAVLVTYSKALGSM---GAALLS 223 (370)
T ss_pred -CCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchHH-hhCCCCCcEEEEechhhhhcC---ceEEEc
Confidence 899999887 9999999999999999999997 4 6777765432 233 236889999999751 244677
Q ss_pred chHHHhhccC--Ch--------H-----------HHH-------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCC
Q 003466 704 TNAVFDSFVG--DS--------K-----------LWD-------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGY 755 (818)
Q Consensus 704 ~~~i~~~l~~--~~--------~-----------~~~-------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~ 755 (818)
.+++.+.+.. .. . .+. +++.+..+.+......++.|....+.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~~~~~~~i~~~~------- 296 (370)
T PRK05937 224 SSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAAPGCVQPIFLPG------- 296 (370)
T ss_pred CHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEeCC-------
Confidence 6765544321 00 0 111 11111111110000111223334444432
Q ss_pred chHHHHHHHHHHHhCCceEee----cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 756 GSLYAASLLKKLREDGVYMRP----LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 756 ~~~~a~~~~~~l~e~Gvlv~p----~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
..+..+.+.|.++||++.. ....+|++++..+|++|||+++++|.+.+++++
T Consensus 297 --~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 297 --ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred --hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 1245678889999999874 347899999999999999999999999998874
No 108
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.91 E-value=3e-22 Score=224.10 Aligned_cols=309 Identities=15% Similarity=0.133 Sum_probs=209.3
Q ss_pred EEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHHH
Q 003466 378 VIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELLL 453 (818)
Q Consensus 378 vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L~ 453 (818)
++++++|. ++++ +|+ +|||+.++ .++||..+|+|++|+++++++++... ...+..+...+++++++
T Consensus 25 ~~~~~~g~--~~~~-~g~----~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la 94 (385)
T PRK05958 25 PREGGAGR--WLVV-DGR----RMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELA 94 (385)
T ss_pred ccccCCCc--eeEe-CCc----eEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHH
Confidence 67788887 6887 999 99999985 46898328999999999998865321 11234677899999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
++++. +.++++++|++++..+++.. . . +.+.|.+...+|+.+..++.+.+....
T Consensus 95 ~~~~~---~~~i~~~~g~~~~~~~l~~~----~-~-----------------~gd~V~~~~~~~~~~~~~~~~~g~~~~- 148 (385)
T PRK05958 95 EWFGA---ERALLFSSGYAANLAVLTAL----A-G-----------------KGDLIVSDKLNHASLIDGARLSRARVR- 148 (385)
T ss_pred HHhCC---CcEEEECcHHHHHHHHHHHh----C-C-----------------CCCEEEEeCccCHHHHHHHHhcCCceE-
Confidence 98873 57788889999999887654 1 1 224566677889877666555432210
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
.+| .+| .+.+++.++.
T Consensus 149 -----------------------------~~~--------------~~d------------------~~~l~~~i~~--- 164 (385)
T PRK05958 149 -----------------------------RYP--------------HND------------------VDALEALLAK--- 164 (385)
T ss_pred -----------------------------EeC--------------CCC------------------HHHHHHHHHh---
Confidence 001 122 1455666652
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-C-cccCCccchh-cccCCCCc---EEEe
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-G-FWRLGVETTA-DLLGCVPD---IACY 687 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-G-fGRtG~~~a~-e~~gv~PD---ivtl 687 (818)
...+.++++++++ ++..|...+ +++|.++|++||+++|+||+|+ | +|++|..+.. ......+| +.++
T Consensus 165 --~~~~~~lvi~~~~-~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~ 237 (385)
T PRK05958 165 --WRAGRALIVTESV-FSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTL 237 (385)
T ss_pred --ccCCCeEEEEEec-ccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEec
Confidence 2235789999998 788887665 9999999999999999999994 3 4555554322 11233567 5689
Q ss_pred cccccCCccccceeecchHHHhhccCCh--------H----------HH---H-------------HHHHHHHHcCCCee
Q 003466 688 GKLLTGGVIPLAATLATNAVFDSFVGDS--------K----------LW---D-------------LELIQQISSHRTVQ 733 (818)
Q Consensus 688 gKgLggGy~PlsAvl~~~~i~~~l~~~~--------~----------~~---~-------------~~l~~~l~~~~~v~ 733 (818)
+|+++. +.|++++++++++.+.... . .+ . +.+.+.++..+ +.
T Consensus 238 sK~~~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~ 313 (385)
T PRK05958 238 GKALGS---SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-FQ 313 (385)
T ss_pred hhhccc---CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence 999973 2366888888776542110 0 00 0 01222333332 22
Q ss_pred EEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec--------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 734 RVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL--------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 734 ~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~--------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
-+...|.++.+.+... ..+.++++.|+++||++.+. .+.+|++|+..++++|+++++++|++++
T Consensus 314 ~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 314 LMDSQSAIQPLIVGDN--------ERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred cCCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 2345677777766421 34667999999999999752 2689999999999999999999997753
No 109
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=99.91 E-value=2.1e-23 Score=228.44 Aligned_cols=176 Identities=19% Similarity=0.242 Sum_probs=140.5
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHhccCCccccCCCcccccccchh
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTKLPSLSLRRNFPSSLILSNSIL 117 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (818)
++++|.||+||+||||||+||+++| + ++|.+|.+|| . +|+..|+.|+.... |.
T Consensus 1 ~~vvIAg~~SG~GKTTvT~glm~aL----~-~rg~~VqpfK---v-GPDYIDP~~H~~at-G~----------------- 53 (451)
T COG1797 1 PAVVIAGTSSGSGKTTVTLGLMRAL----R-RRGLKVQPFK---V-GPDYIDPGYHTAAT-GR----------------- 53 (451)
T ss_pred CceEEecCCCCCcHHHHHHHHHHHH----H-hcCCcccccc---c-CCCccCchhhhHhh-CC-----------------
Confidence 4799999999999999999999999 4 9999999999 3 46778988766553 43
Q ss_pred hhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCCChhHH
Q 003466 118 FSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVVGDSKV 197 (818)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~~~~~i 197 (818)
.|.|+..| ....+.|
T Consensus 54 -------------------------------------------------~srNLD~~----------------mm~~~~v 68 (451)
T COG1797 54 -------------------------------------------------PSRNLDSW----------------MMGEEGV 68 (451)
T ss_pred -------------------------------------------------ccCCCchh----------------hcCHHHH
Confidence 45667777 3455788
Q ss_pred HHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCC---CCCchhhHhhhCCCCEEEEEcCCCChH--HHHHHHHH
Q 003466 198 IETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGP---SGSLQCDLYRPFRLPGILVGDGRLGGI--SGTISAYE 272 (818)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~---~~~~~~dla~~l~~pvilV~~~~~g~i--~~~~~~~~ 272 (818)
.+.|.+..++ .|+.||||+||++++.. +..+.+++||.|++|||||+|++..+- .+.+.++.
T Consensus 69 ~~~f~~~~~~-------------adi~vIEGVMGLfDG~~~~~~~gSTA~lAk~l~~PVvLVid~~~~s~S~AAiv~G~~ 135 (451)
T COG1797 69 RALFARAAAD-------------ADIAVIEGVMGLFDGRGSATDTGSTADLAKLLGAPVVLVVDASGLSRSVAAIVKGFK 135 (451)
T ss_pred HHHHHHhcCC-------------CCEEEEeeccccccCCCCCcCCCCHHHHHHHhCCCEEEEEeCcchhHHHHHHHHHHH
Confidence 8888887765 89999999999999833 357999999999999999999885443 33333444
Q ss_pred HHHhCCCcEEEEEEccC-CCCCHHHHHHhhcC--CCCEEe-cCCCCCCCcc
Q 003466 273 SLKLRGYDVVAVVFEDH-GLVNEVPLMSYLRN--RVPVLV-LPPLPQDSSN 319 (818)
Q Consensus 273 ~l~~~~~~v~gvi~N~~-~~~~~~~l~~~~~~--~~pvlg-iP~~~~~~~~ 319 (818)
.+. .+++|.|||+|++ ++.+.+.+++.++. ++||+| ||..+++.-|
T Consensus 136 ~fd-p~v~iaGVIlNrVgserH~~llr~Ale~~~gv~vlG~lpr~~~l~lp 185 (451)
T COG1797 136 HFD-PDVNIAGVILNRVGSERHYELLRDALEEYTGVPVLGYLPRDDDLELP 185 (451)
T ss_pred hcC-CCCceEEEEEecCCCHHHHHHHHHHhhhcCCCcEEEEecCCcccCCc
Confidence 443 3589999999999 56777777766653 799999 9999988866
No 110
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional
Probab=99.90 E-value=3.1e-23 Score=233.93 Aligned_cols=174 Identities=18% Similarity=0.216 Sum_probs=132.5
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHhccCCccccCCCcccccccch
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTKLPSLSLRRNFPSSLILSNSI 116 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (818)
|++|||+||+||+|||+||++|+++| + ++|.+|.+||| | ++..|+.++.+.. +.
T Consensus 1 m~~~~i~~~~s~~GKT~vt~gl~~~l----~-~~g~~v~~~K~---G-pd~iD~~~~~~~~-g~---------------- 54 (433)
T PRK13896 1 MKGFVLGGTSSGVGKTVATLATIRAL----E-DAGYAVQPAKA---G-PDFIDPSHHEAVA-GR---------------- 54 (433)
T ss_pred CceEEEEeCCCCCCHHHHHHHHHHHH----H-HCCCeeEEEee---C-CCCCCHHHHHHHh-CC----------------
Confidence 67899999999999999999999999 4 89999999997 5 4467888776653 32
Q ss_pred hhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCCChhH
Q 003466 117 LFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVVGDSK 196 (818)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~~~~~ 196 (818)
.+.|+ +|+++. .+.
T Consensus 55 --------------------------------------------------~~~nl-------d~~~~~---------~~~ 68 (433)
T PRK13896 55 --------------------------------------------------PSRTL-------DPWLSG---------EDG 68 (433)
T ss_pred --------------------------------------------------CcccC-------ChhhCC---------HHH
Confidence 11121 222221 234
Q ss_pred HHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCCh--HHHHHHHHHHH
Q 003466 197 VIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGG--ISGTISAYESL 274 (818)
Q Consensus 197 i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~--i~~~~~~~~~l 274 (818)
|.+.+.+ ..+|++||||+||++++ ...+++|||+.+++|||||++.++|+ ++++++++..+
T Consensus 69 i~~~~~~---------------~~~d~~vIEG~gGl~dg--~~~s~adla~~l~~PviLVv~~~~g~~s~aa~l~g~~~~ 131 (433)
T PRK13896 69 MRRNYYR---------------GEGDICVVEGVMGLYDG--DVSSTAMVAEALDLPVVLVVDAKAGMESVAATALGFRAY 131 (433)
T ss_pred HHHHHHh---------------hcCCEEEEECCCccccC--CCCCHHHHHHHHCCCEEEEEcCcccHHHHHHHHHHHHHH
Confidence 5554432 12899999999999976 34789999999999999999999995 66668887444
Q ss_pred Hh---CCCcEEEEEEccCC-CCCHHHHHHhhcCCCCEEe-cCCCCCCCcc
Q 003466 275 KL---RGYDVVAVVFEDHG-LVNEVPLMSYLRNRVPVLV-LPPLPQDSSN 319 (818)
Q Consensus 275 ~~---~~~~v~gvi~N~~~-~~~~~~l~~~~~~~~pvlg-iP~~~~~~~~ 319 (818)
.. ++++|+|||+|++. +.+.+.+++.+++++||+| ||..+++.-+
T Consensus 132 ~~~~~~~~~i~GvIlN~~~~~~h~~~l~~~~~~~i~vlG~lP~~~~~~~~ 181 (433)
T PRK13896 132 ADRIGRDIDVAGVIAQRAHGGRHADGIRDALPDELTYFGRIPPRDDLEIP 181 (433)
T ss_pred HHhccCCCcEEEEEEECCCcHHHHHHHHHhhhhcCceeEecccCCCCCCC
Confidence 33 57999999999995 4456666776655799999 9999887654
No 111
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism]
Probab=99.90 E-value=9.3e-25 Score=243.30 Aligned_cols=216 Identities=18% Similarity=0.111 Sum_probs=172.0
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCC--CCchHHHHHhccCCccccCCCccccccc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPH--DSDSRFLFTKLPSLSLRRNFPSSLILSN 114 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (818)
|+.+||.||.|++|||++++||||.| . ++|.+|++|||++...+. ..+...+.+.
T Consensus 1 ~~~iMv~GT~S~~GKS~~~aglcRi~----~-~~G~~V~PFK~QNMsLNs~it~~G~EIgra------------------ 57 (486)
T COG1492 1 MKAIMVQGTTSDAGKSFLVAGLCRIL----A-RRGYRVAPFKSQNMSLNSAITPGGGEIGRA------------------ 57 (486)
T ss_pred CCccEEEeccCCcchhhhhhhhhHHH----H-hcCCccCCCchhhcccccEECCCCcEEehh------------------
Confidence 56899999999999999999999999 4 999999999998775543 2232323332
Q ss_pred chhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCccccccccccee-cccccChHHHHhhhcCCCCC
Q 003466 115 SILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFA-WEEAVSPHLAAERESGGVVG 193 (818)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~a~~~~~~~~~~ 193 (818)
|..|+.+|...+...|+|+.++|. +|..+|+...++.....+. -. |.+ ++...
T Consensus 58 -----Q~~QA~Aa~i~p~v~mNPvLLKP~-sd~~sQVIv~G~~~G~~s~--------~~yy~~------------~~~~l 111 (486)
T COG1492 58 -----QALQALAAGIEPSVHMNPVLLKPC-SDTGSQVIVMGKDIGRKSA--------VEYYQE------------GKGLL 111 (486)
T ss_pred -----hhHHHHHcCCCCccccCCEEEeec-CCCceEEEEecccccccCh--------HHHHHH------------HHHHH
Confidence 566778888889999999999998 9999999998887777332 22 111 33456
Q ss_pred hhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCc--CCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHH-H
Q 003466 194 DSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASP--GPSGSLQCDLYRPFRLPGILVGDGRLGGISGTIS-A 270 (818)
Q Consensus 194 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p--~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~-~ 270 (818)
+..+.+.+.++.+. +|+|++||||+-+.. ...+..|+.+|+..++|||||+|++.|++++.+. |
T Consensus 112 ~~~v~~s~~~l~~~-------------~d~Vv~EGAGSpaEiNlr~~Di~Nm~~a~~~dapvILV~DIdRGGvfAsl~GT 178 (486)
T COG1492 112 WVAVKESLERLDRE-------------YDVVVIEGAGSPAEINLRDRDIANMGVAEIADAPVILVGDIDRGGVFASLYGT 178 (486)
T ss_pred HHHHHHHHHHhhhc-------------ccEEEEecCCChhhcCcccccccceeeehhcCCCEEEEEeecccceeeeeeeh
Confidence 77888888887766 999999999965543 3367899999999999999999999988888777 6
Q ss_pred HHHHHh-CCCcEEEEEEccC------CCCCHHHHHHhhcCCCCEEe-cCCCCCC
Q 003466 271 YESLKL-RGYDVVAVVFEDH------GLVNEVPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 271 ~~~l~~-~~~~v~gvi~N~~------~~~~~~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
+++|.. ...+|+|+|+|++ -.+..++|++.+ ++|||| +||++..
T Consensus 179 ~~lL~~~~r~~VkG~iINkFRGd~~ll~~gik~Le~~t--g~~vlGv~P~~~~~ 230 (486)
T COG1492 179 LALLPESDRALVKGFIINKFRGDESLLDPGLKWLEELT--GVPVLGVLPYLKDA 230 (486)
T ss_pred heecCHhHhcceeEEEEeeeCCCHHHHhhHHHHHHHhh--CCeeEeeccccccc
Confidence 666653 3467999999999 245688899998 999999 9998874
No 112
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase. This model describes cobyrinic acid a,c-diamide synthase, the cobB (cbiA in Salmonella) protein of cobalamin biosynthesis. It is responsible for the amidation of carboxylic groups at positions A and C of either cobyrinic acid or hydrogenobrynic acid. NH(2) groups are provided by glutamine and one molecule of ATP hydrogenolyzed for each amidation.
Probab=99.89 E-value=1.6e-22 Score=231.60 Aligned_cols=172 Identities=16% Similarity=0.217 Sum_probs=129.7
Q ss_pred eEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHhccCCccccCCCcccccccchhh
Q 003466 39 TFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTKLPSLSLRRNFPSSLILSNSILF 118 (818)
Q Consensus 39 ~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (818)
+|||+||+||||||+||++|+++| + ++|++|++||| | ++..|..++.... +.
T Consensus 1 ~~~I~gT~t~vGKT~vt~~L~~~L----~-~~G~~V~~fK~---g-~d~~D~~~~~~~~-g~------------------ 52 (449)
T TIGR00379 1 RVVIAGTSSGVGKTTISTGIMKAL----S-RRKLRVQPFKV---G-PDYIDPMFHTQAT-GR------------------ 52 (449)
T ss_pred CEEEEeCCCCCcHHHHHHHHHHHH----H-HCCCceeEEcc---C-CCCCCHHHHHHHh-CC------------------
Confidence 489999999999999999999999 4 89999999998 3 3445766654442 21
Q ss_pred hhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCCChhHHH
Q 003466 119 SSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVVGDSKVI 198 (818)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~~~~~i~ 198 (818)
.+.++..| .+..+.|.
T Consensus 53 ------------------------------------------------~~~~ld~~----------------~~~~~~i~ 68 (449)
T TIGR00379 53 ------------------------------------------------PSRNLDSF----------------FMSEAQIQ 68 (449)
T ss_pred ------------------------------------------------chhhCCcc----------------cCCHHHHH
Confidence 00111111 13467888
Q ss_pred HHHHHHHhccccccccccccCCCCEEEEeCCCCCC---CcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHH--H
Q 003466 199 ETLGKCLRDGLESESESERGKMEILCIVETAGGVA---SPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYE--S 273 (818)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~---~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~--~ 273 (818)
+.|.++.++ +|++||||+||++ +|.....+++|||+.+++|||||++.+ ++++++.++. +
T Consensus 69 ~~~~~~~~~-------------~D~viVEGagGl~~g~~p~~~~~s~adlAk~l~~pVILV~~~~--~~~~t~~al~~~~ 133 (449)
T TIGR00379 69 ECFHRHSKG-------------TDYSIIEGVRGLYDGISAITDYGSTASVAKALDAPIVLVMNCQ--RLSRSAAAIVLGY 133 (449)
T ss_pred HHHHHhccc-------------CCEEEEecCCccccCCCCCCCCccHHHHHHHhCCCEEEEECCc--hHHHHHHHHHHHH
Confidence 888887655 8999999999999 566667899999999999999999987 4666666643 1
Q ss_pred -HHhCCCcEEEEEEccCCCC-----CHHHHHHhhcCCCCEEe-cCCCCCCCcc
Q 003466 274 -LKLRGYDVVAVVFEDHGLV-----NEVPLMSYLRNRVPVLV-LPPLPQDSSN 319 (818)
Q Consensus 274 -l~~~~~~v~gvi~N~~~~~-----~~~~l~~~~~~~~pvlg-iP~~~~~~~~ 319 (818)
...++++|+|||+|++..+ +.+.+++.+ ++||+| ||+.+.+..+
T Consensus 134 ~~~~~~i~i~GvIlN~v~~~~~~~~~~~~i~~~~--gipvLG~IP~~~~l~~p 184 (449)
T TIGR00379 134 RSFDPGVKLKGVILNRVGSERHLEKLKIAVEPLR--GIPILGVIPRQQDLKVP 184 (449)
T ss_pred HhhCCCCCEEEEEEECCCCHHHHHHHHHHHHHhC--CCCEEEEecCccccCCC
Confidence 2245899999999999432 233455555 999999 9999887654
No 113
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=99.89 E-value=1.8e-22 Score=231.53 Aligned_cols=178 Identities=17% Similarity=0.217 Sum_probs=132.9
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHhccCCccccCCCcccccccc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTKLPSLSLRRNFPSSLILSNS 115 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (818)
+|++|||+||+||+|||++|++|+++|+ ++|++|.+||| | ++..|+.++.... +...
T Consensus 2 ~m~~i~I~gt~s~~GKT~it~~L~~~L~-----~~G~~V~~fK~---G-pd~~d~~~~~~~~-g~~~------------- 58 (451)
T PRK01077 2 RMPALVIAAPASGSGKTTVTLGLMRALR-----RRGLRVQPFKV---G-PDYIDPAYHTAAT-GRPS------------- 58 (451)
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHH-----hCCCCcceeec---C-CCcccHHHHHHHh-CCCc-------------
Confidence 4789999999999999999999999994 89999999998 4 3446766555432 2100
Q ss_pred hhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCCChh
Q 003466 116 ILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVVGDS 195 (818)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~~~~ 195 (818)
...+++. ...+
T Consensus 59 ---------------------------------------------------~~ld~~~------------------~~~~ 69 (451)
T PRK01077 59 ---------------------------------------------------RNLDSWM------------------MGEE 69 (451)
T ss_pred ---------------------------------------------------ccCCcee------------------CCHH
Confidence 0011222 2356
Q ss_pred HHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcC---CCCCchhhHhhhCCCCEEEEEcCCCCh--HHHHHHH
Q 003466 196 KVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPG---PSGSLQCDLYRPFRLPGILVGDGRLGG--ISGTISA 270 (818)
Q Consensus 196 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~---~~~~~~~dla~~l~~pvilV~~~~~g~--i~~~~~~ 270 (818)
.|.+.|.++.++ +|++||||+||++++. ....+++|||+.+++|||||++.+..+ +++++.+
T Consensus 70 ~v~~~~~~~~~~-------------~D~vlVEGagGl~~g~~~~~~~~s~adiA~~l~~pviLV~~~~~~~~~~a~l~~~ 136 (451)
T PRK01077 70 LVRALFARAAQG-------------ADIAVIEGVMGLFDGAGSDPDEGSTADIAKLLGAPVVLVVDASGMAQSAAALVLG 136 (451)
T ss_pred HHHHHHHHhccc-------------CCEEEEECCCccccCCccCCCCCCHHHHHHHhCCCEEEEECCchHHHHHHHHHHH
Confidence 888888877655 8999999999999963 356889999999999999999988644 5555556
Q ss_pred HHHHHhCCCcEEEEEEccCCC-CCHHHHHHhhcC-CCCEEe-cCCCCCCCcc
Q 003466 271 YESLKLRGYDVVAVVFEDHGL-VNEVPLMSYLRN-RVPVLV-LPPLPQDSSN 319 (818)
Q Consensus 271 ~~~l~~~~~~v~gvi~N~~~~-~~~~~l~~~~~~-~~pvlg-iP~~~~~~~~ 319 (818)
+..+ .++++|+|||+|++.. ...+.+.+.++. ++||+| ||+.+.+..+
T Consensus 137 ~~~~-~~~i~i~GvI~N~v~~~~~~~~l~~~l~~~gipvLG~IP~~~~l~~p 187 (451)
T PRK01077 137 FATF-DPDVRIAGVILNRVGSERHYQLLREALERCGIPVLGALPRDAALALP 187 (451)
T ss_pred HHHh-CCCCCEEEEEEECCCChhHHHHHHHHHHhcCCCEEEEeeCCcccCCC
Confidence 6655 3478999999999943 333444444433 899999 9999887644
No 114
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.87 E-value=1.4e-20 Score=212.06 Aligned_cols=316 Identities=15% Similarity=0.149 Sum_probs=207.1
Q ss_pred EEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccc-c---CCCCCChhHHHHHHHHH
Q 003466 378 VIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHV-M---FPENVYEPALECAELLL 453 (818)
Q Consensus 378 vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~-~---~~~~~~~~~~eLae~L~ 453 (818)
++.++.|. ++++.+|+ +||||.+ ++++|++.+|++++++.+++.+++.. + +..+..+.+.+|.+.|+
T Consensus 23 ~~~~~~~~--~~~~~~g~----~~i~~~~---~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia 93 (393)
T TIGR01822 23 IITSPQGA--DIRVADGR----EVLNFCA---NNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIA 93 (393)
T ss_pred ccccCCCc--eEEecCCc----eEEEeeC---CCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHH
Confidence 45566666 57888999 9999999 47899988999999999999886432 1 11234677899999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
++++. +.++.++||++|+.+++.... ..| +.|..+.-+|.+...++.+.+....
T Consensus 94 ~~~g~---~~~ii~~~~~~a~~~~~~~l~-----~~g-----------------d~vi~~~~~~~s~~~~~~~~~~~~~- 147 (393)
T TIGR01822 94 AFLGT---EDTILYASCFDANGGLFETLL-----GAE-----------------DAIISDALNHASIIDGVRLCKAKRY- 147 (393)
T ss_pred HHhCC---CcEEEECchHHHHHHHHHHhC-----CCC-----------------CEEEEeccccHHHHHHHHhcCCceE-
Confidence 99984 567777999999997776441 122 3344455566655444333221100
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
. +.++|+ +.+++.+.+..
T Consensus 148 -----------------------------~--------------~~~~d~------------------~~l~~~i~~~~- 165 (393)
T TIGR01822 148 -----------------------------R--------------YANNDM------------------ADLEAQLKEAR- 165 (393)
T ss_pred -----------------------------E--------------eCCCCH------------------HHHHHHHHhhh-
Confidence 0 002332 34555554310
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-Cc-ccCCccchhcccCC--CCcEE--Ee
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GF-WRLGVETTADLLGC--VPDIA--CY 687 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-Gf-GRtG~~~a~e~~gv--~PDiv--tl 687 (818)
....++..|+++++ ++..|.+.+ +++|.++|++||++||+||+|. |+ |..|.. ..+..++ .+|++ ++
T Consensus 166 -~~~~~~~~v~~~~v-~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~~~~~~~di~~~s~ 238 (393)
T TIGR01822 166 -AAGARHRLIATDGV-FSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRG-SHELCGVMGRVDIITGTL 238 (393)
T ss_pred -hcCCCceEEEEeCC-ccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCCc-hHHhcCCCCCCeEEEEEC
Confidence 11236789999998 788888775 8999999999999999999993 32 333332 2344555 36777 78
Q ss_pred cccccCCccccceeecchHHHhhccCChH---------------------HHH-------------HHHHHHHHcCCCee
Q 003466 688 GKLLTGGVIPLAATLATNAVFDSFVGDSK---------------------LWD-------------LELIQQISSHRTVQ 733 (818)
Q Consensus 688 gKgLggGy~PlsAvl~~~~i~~~l~~~~~---------------------~~~-------------~~l~~~l~~~~~v~ 733 (818)
+|+++| .++|.+++++++++.+..... .+. +.+.+.++..+. .
T Consensus 239 sK~l~g--~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~ 315 (393)
T TIGR01822 239 GKALGG--ASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAAGF-D 315 (393)
T ss_pred hHHhhC--CCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-C
Confidence 999986 367888899888875532100 010 112222333221 1
Q ss_pred EEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee-------cC-CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 734 RVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP-------LG-NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 734 ~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p-------~g-~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
-....+.++.+.+.+. ..+..+++.|.++||++.. .+ .++|++++..+|++||++++++|.+++
T Consensus 316 ~~~~~~~~~~i~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 316 IKPADHPIIPVMLYDA--------VLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred CCCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 1112344555544321 3466789999999999863 12 579999999999999999999999887
Q ss_pred HHH
Q 003466 806 EEF 808 (818)
Q Consensus 806 ~~l 808 (818)
+++
T Consensus 388 ~~~ 390 (393)
T TIGR01822 388 REL 390 (393)
T ss_pred HHh
Confidence 654
No 115
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.87 E-value=2.2e-20 Score=210.03 Aligned_cols=316 Identities=16% Similarity=0.127 Sum_probs=206.5
Q ss_pred EEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHHH
Q 003466 378 VIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELLL 453 (818)
Q Consensus 378 vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L~ 453 (818)
.+++++|. ++||.+|+ .|||++++ .++||..+|++.++++++++++++.. +..+..+...++++.|+
T Consensus 27 ~~~~~~~~--~~~~~~g~----~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la 97 (397)
T PRK06939 27 VITSPQGA--DITVADGK----EVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLA 97 (397)
T ss_pred cccCCCCc--eEEecCCC----eEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHH
Confidence 34567776 69999999 99999884 56899549999999999998765321 12345678889999999
Q ss_pred hccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCC
Q 003466 454 QGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYT 533 (818)
Q Consensus 454 ~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~ 533 (818)
++++. +..+++++|++|+..+++... ..| ..||+.+ .+|.+...++...+...
T Consensus 98 ~~~g~---~~~i~~tsG~~a~~~~~~~l~-----~~g----------------d~vi~~~-~~~~~~~~~~~~~~~~~-- 150 (397)
T PRK06939 98 KFLGT---EDAILYSSCFDANGGLFETLL-----GKE----------------DAIISDA-LNHASIIDGVRLCKAKR-- 150 (397)
T ss_pred HHhCC---CcEEEEcChHHHHHHHHHHhC-----CCC----------------CEEEEEh-hhhHHHHHHHHhcCCce--
Confidence 98873 456677789999999887551 122 2455544 45544333333222110
Q ss_pred CcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCC
Q 003466 534 GFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPG 613 (818)
Q Consensus 534 ~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~ 613 (818)
+.+| ++|+ +.+++.+.+..
T Consensus 151 ----------------------------~~~~--------------~~d~------------------~~l~~~i~~~~- 169 (397)
T PRK06939 151 ----------------------------YRYA--------------NNDM------------------ADLEAQLKEAK- 169 (397)
T ss_pred ----------------------------EEeC--------------CCCH------------------HHHHHHHHhhh-
Confidence 0011 1221 33444443210
Q ss_pred CCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-Cc-ccCCccchhcccCC--CCcEE--Ee
Q 003466 614 LKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GF-WRLGVETTADLLGC--VPDIA--CY 687 (818)
Q Consensus 614 ~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-Gf-GRtG~~~a~e~~gv--~PDiv--tl 687 (818)
....++++|+++++ ++..|...+ +++|.++|++||+++|+||++. |+ ++.|.. ....+++ .+|++ ++
T Consensus 170 -~~~~~~~~v~~~~v-~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~~~~~~~~i~~~S~ 242 (397)
T PRK06939 170 -EAGARHKLIATDGV-FSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRG-TVEHFGVMDRVDIITGTL 242 (397)
T ss_pred -ccCCCCeEEEEecC-cCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCC-HHHHcCCCCCCcEEEEEC
Confidence 11236789999998 788787544 9999999999999999999994 43 444442 3344565 46787 89
Q ss_pred cccccCCccccceeecchHHHhhccCC--------h--H-----------HHH-------------HHHHHHHHcCCCee
Q 003466 688 GKLLTGGVIPLAATLATNAVFDSFVGD--------S--K-----------LWD-------------LELIQQISSHRTVQ 733 (818)
Q Consensus 688 gKgLggGy~PlsAvl~~~~i~~~l~~~--------~--~-----------~~~-------------~~l~~~l~~~~~v~ 733 (818)
+|+++|+ ++|.+++++++++.+... . . .+. +.+.+.++.++. .
T Consensus 243 sK~~~g~--r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~ 319 (397)
T PRK06939 243 GKALGGA--SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAGF-T 319 (397)
T ss_pred HHHhCcc--CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-C
Confidence 9999754 688899999888765321 0 0 000 012233333321 1
Q ss_pred EEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec--------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 734 RVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL--------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 734 ~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~--------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
.+.+.|.++.+.+... ..+..+++.|.++||.+.+. .+.+|+.++..++++||++++++|.+++
T Consensus 320 ~~~~~~~~~~~~~~~~--------~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 320 LGPGEHPIIPVMLGDA--------KLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred cCCCCCCEEEEEECCH--------HHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 1224455554443211 24667899999999998742 2579999999999999999999999988
Q ss_pred HHH
Q 003466 806 EEF 808 (818)
Q Consensus 806 ~~l 808 (818)
+++
T Consensus 392 ~~~ 394 (397)
T PRK06939 392 KEL 394 (397)
T ss_pred HHh
Confidence 664
No 116
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.87 E-value=5.1e-22 Score=211.85 Aligned_cols=291 Identities=14% Similarity=0.077 Sum_probs=215.4
Q ss_pred cccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHh
Q 003466 410 TQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKF 485 (818)
Q Consensus 410 ~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~ 485 (818)
|.|||.+.||+|.+|+.+.++++|... ..++++..+++|++.|+++..+ +.+++++|-+-||+..|-..-+
T Consensus 179 NDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK---~aALlFsSCfVANDstLftLak-- 253 (570)
T KOG1360|consen 179 NDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQK---EAALLFSSCFVANDSTLFTLAK-- 253 (570)
T ss_pred CccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcC---cceeeeeeeeeccchHHHHHHH--
Confidence 556776669999999999999987643 3456688899999999999874 6788888999999999987622
Q ss_pred hhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCc
Q 003466 486 SFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLP 565 (818)
Q Consensus 486 t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P 565 (818)
.. ..-+|..|.+.|.+++.++.-++.+.+.+
T Consensus 254 -~l-----------------pgcei~SD~gNHASMI~GIrns~v~K~IF------------------------------- 284 (570)
T KOG1360|consen 254 -KL-----------------PGCEIFSDEGNHASMIQGIRNSRVPKHIF------------------------------- 284 (570)
T ss_pred -HC-----------------CCcEEeccccchHHHHHHhhhcCCcceee-------------------------------
Confidence 11 23689999999999988777765443221
Q ss_pred chhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHH
Q 003466 566 EWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRI 645 (818)
Q Consensus 566 ~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~ 645 (818)
.|||+ ++|+++|+. ..+.....|-+|.| .++.|.+.| +++
T Consensus 285 -------------rHND~------------------~hL~~lL~~----~~~svPKivAFEtV-hSM~Gavcp----lee 324 (570)
T KOG1360|consen 285 -------------RHNDL------------------DHLEQLLQS----SPKSVPKIVAFETV-HSMDGAVCP----LEE 324 (570)
T ss_pred -------------ccCCH------------------HHHHHHHHh----CCCCCCceEEEeee-eccCCCcCC----HHH
Confidence 27885 688889986 33455568889998 899999998 999
Q ss_pred HHHHHHhcCCcEEEeecccCcccCCccch--hcccCC--CCcEE--Eeccccc--CCccccceeecchHHHhhccCChH-
Q 003466 646 LVKECQNRKIPVIFDEVFTGFWRLGVETT--ADLLGC--VPDIA--CYGKLLT--GGVIPLAATLATNAVFDSFVGDSK- 716 (818)
Q Consensus 646 LreLc~~~gilLI~DEV~TGfGRtG~~~a--~e~~gv--~PDiv--tlgKgLg--gGy~PlsAvl~~~~i~~~l~~~~~- 716 (818)
|.+++++||++..+|||| ..|-.|..++ -++-|| +-||+ |+||+.| ||| ++++..++|.++..+.
T Consensus 325 lcDvah~yGAiTFlDEVH-AVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGY-----IAat~~LvDmiRSyAaG 398 (570)
T KOG1360|consen 325 LCDVAHKYGAITFLDEVH-AVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGY-----IAATRKLVDMIRSYAAG 398 (570)
T ss_pred HHHHHHHhCceeeeehhh-hhccccCCCCCccccCCcchhhhhcccchhhhcccccce-----ehhhhhHHHHHHHhcCc
Confidence 999999999999999999 4666777543 567787 56887 8999999 898 8899999988765432
Q ss_pred --------------------HHH-H--------------HHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHH
Q 003466 717 --------------------LWD-L--------------ELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAA 761 (818)
Q Consensus 717 --------------------~~~-~--------------~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~ 761 (818)
++. + .+++.+.+.++. -+..-..++.+.+. +..++.
T Consensus 399 FIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiP-Vi~~pSHIiPv~vg--------da~l~~ 469 (570)
T KOG1360|consen 399 FIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIP-VIPNPSHIIPVRVG--------DAALAK 469 (570)
T ss_pred eEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCc-ccCCCcceeeeecc--------CHHHHH
Confidence 110 0 011222222211 01112223333333 236778
Q ss_pred HHHHHHH-hCCceEee-------cC-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 762 SLLKKLR-EDGVYMRP-------LG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 762 ~~~~~l~-e~Gvlv~p-------~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
.++..|+ ++|||+.. .| .++|+.|+..||++-++.+++.+..++.++.
T Consensus 470 ~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 470 QASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred HHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 8888887 77999974 34 8999999999999999999999999998874
No 117
>PLN02483 serine palmitoyltransferase
Probab=99.86 E-value=7.1e-20 Score=212.20 Aligned_cols=303 Identities=12% Similarity=0.076 Sum_probs=200.3
Q ss_pred ceeecccccccccCCCCC-CHHHHHHHHHhhhhcccccC----CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHH
Q 003466 400 QQFDACASWWTQGPDATL-QIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAI 474 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~-hp~V~eAi~~q~~~~~~~~~----~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~ 474 (818)
++|+|.| +++||.+. ++.+.+++.+++++++..+. ..+.++.+.+|+++|+++++. +..+++++|+.+|
T Consensus 101 ~~~n~~s---~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~---~~ai~~~~G~~an 174 (489)
T PLN02483 101 RCLNLGS---YNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK---PAAIVFGMGYATN 174 (489)
T ss_pred eEEEeec---CCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC---CcEEEECCHHHHH
Confidence 8999999 99999873 57789999999999875321 123578999999999999984 4566668999999
Q ss_pred HHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccc
Q 003466 475 EIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVF 554 (818)
Q Consensus 475 e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~ 554 (818)
..++... -. +.+.|..+..+|.+...++..+|....
T Consensus 175 ~~~i~al-----~~-----------------~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~---------------------- 210 (489)
T PLN02483 175 STIIPAL-----IG-----------------KGGLIISDSLNHNSIVNGARGSGATIR---------------------- 210 (489)
T ss_pred HHHHHHh-----CC-----------------CCCEEEEcchhhHHHHHHHHHcCCeEE----------------------
Confidence 9877754 11 224566777777776665555443211
Q ss_pred ccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCC-CCCCCCcEEEEEEccccccCC
Q 003466 555 MYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNP-GLKVSGCIGALIIEPVVHAAG 633 (818)
Q Consensus 555 ~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~-~~~~~~~iAAVIvEPV~~g~g 633 (818)
.+ ++||++ .+ .+.+++.+.... ....+.....|++|++ .++.
T Consensus 211 --------~~--------------~~~d~~----------~l----e~~l~~~i~~~~p~t~~p~~k~livve~v-~s~~ 253 (489)
T PLN02483 211 --------VF--------------QHNTPS----------HL----EEVLREQIAEGQPRTHRPWKKIIVIVEGI-YSME 253 (489)
T ss_pred --------EE--------------eCCCHH----------HH----HHHHHhhhhccccccccCCceEEEEECCC-CCCC
Confidence 01 134320 11 122222221100 0011223468999998 7888
Q ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEeeccc--CcccCCccchhcccCCCC---cEE--Eeccccc--CCccccceeecc
Q 003466 634 GMHMVDPLFQRILVKECQNRKIPVIFDEVFT--GFWRLGVETTADLLGCVP---DIA--CYGKLLT--GGVIPLAATLAT 704 (818)
Q Consensus 634 G~~~~p~~fl~~LreLc~~~gilLI~DEV~T--GfGRtG~~~a~e~~gv~P---Div--tlgKgLg--gGy~PlsAvl~~ 704 (818)
|.+.+ +++|.++|++||++||+||+|+ .+|++|.+ ..+++++.| ||+ +++|++| ||| ++++
T Consensus 254 G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G~g-~~~~~~v~~~~~dI~~~SfSKs~g~~GG~-----i~~~ 323 (489)
T PLN02483 254 GELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRG-VCELLGVDPADVDIMMGTFTKSFGSCGGY-----IAGS 323 (489)
T ss_pred CcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCCCc-hHHhcCCCcccCcEEEEecchhcccCceE-----EEcC
Confidence 87775 9999999999999999999996 25666654 457778765 666 9999997 554 8889
Q ss_pred hHHHhhccCCh--------H----------HH---H-H-----------H-------HHHHHHcCCCeeEEE--eeeeEE
Q 003466 705 NAVFDSFVGDS--------K----------LW---D-L-----------E-------LIQQISSHRTVQRVV--ALGTLC 742 (818)
Q Consensus 705 ~~i~~~l~~~~--------~----------~~---~-~-----------~-------l~~~l~~~~~v~~vr--g~Gl~~ 742 (818)
+++++.+.... . .+ . + + +.+.|++.+. .+. ..+.+.
T Consensus 324 ~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~--~v~~~~~sp~~ 401 (489)
T PLN02483 324 KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGF--EVLGDNDSPVM 401 (489)
T ss_pred HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCC--cccCCCCCCEE
Confidence 98888765310 0 01 0 0 0 1222333321 111 113444
Q ss_pred EEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------C-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 743 AIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------G-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 743 ~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
.+.+... .....+++.|+++||++.+. + .++|+++++.+|+|||++++++|+++++.+.
T Consensus 402 ~l~l~~~--------~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 402 PIMLYNP--------AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred EEEECCH--------HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 4444322 34557899999999999842 1 6899999999999999999999999887764
No 118
>cd03109 DTBS Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms. The enzyme catalyzes formation of the ureido ring of dethiobiotin from (7R,8S)-7,8-diaminononanoic acid (DAPA) and carbon dioxide. The enzyme utilizes carbon dioxide instead of hydrogen carbonate as substrate and is dependent on ATP and divalent metal ions as cofactors.
Probab=99.85 E-value=7.4e-21 Score=183.09 Aligned_cols=88 Identities=26% Similarity=0.368 Sum_probs=79.8
Q ss_pred CEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCC------CCHH
Q 003466 222 ILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGL------VNEV 295 (818)
Q Consensus 222 d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~------~~~~ 295 (818)
|++|||||||+++|...+.+++|+|+.+++|+|+|++.++|+++|++.+++.++.+|+.+.|||.|++.. .+.+
T Consensus 40 d~vliEGaGg~~~p~~~~~~~~d~~~~~~~~vllV~~~~~g~i~~a~~~~~~l~~~g~~i~gvi~N~~~~~~~~~~~~~~ 119 (134)
T cd03109 40 DFVLVEGAGGLCVPLKEDFTNADVAKELNLPAILVTSAGLGSINHAFLTIEAARIKGIILNGVLGNVIVEKEGLATLNVE 119 (134)
T ss_pred CEEEEECCCccccCCCCCCCHHHHHHHhCCCEEEEEcCCCCcHhHHHHHHHHHHhcCCceeEEEEccCCCccchhhhhHH
Confidence 6799999999999999999999999999999999999999999999999999999999999999999732 2355
Q ss_pred HHHHhhcCCCCEEe-cC
Q 003466 296 PLMSYLRNRVPVLV-LP 311 (818)
Q Consensus 296 ~l~~~~~~~~pvlg-iP 311 (818)
.+++.+ ++|++| ||
T Consensus 120 ~i~~~~--gip~LG~IP 134 (134)
T cd03109 120 TIERLT--GIPVLGIVP 134 (134)
T ss_pred HHHHhc--CCCEEEeCC
Confidence 666666 999999 77
No 119
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=99.85 E-value=4.3e-21 Score=230.09 Aligned_cols=187 Identities=16% Similarity=0.102 Sum_probs=140.8
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHhccCCccccCCCcccccccc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTKLPSLSLRRNFPSSLILSNS 115 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (818)
||++|||+||+|++|||+||+||+++|. ++|.+|+|||||++++- +........
T Consensus 1 m~k~l~I~~T~t~~GKT~vslgL~~~L~-----~~G~~Vg~fKPi~~~p~---~~~~~~~~~------------------ 54 (684)
T PRK05632 1 MSRSIYLAPTGTGVGLTSVSLGLMRALE-----RKGVKVGFFKPIAQPPL---TMSEVEALL------------------ 54 (684)
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHHH-----hCCCeEEEeCCcccCCC---CHHHHHHHH------------------
Confidence 5789999999999999999999999994 89999999999998621 111110000
Q ss_pred hhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhhcCCCCChh
Q 003466 116 ILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERESGGVVGDS 195 (818)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~~~~~~~~ 195 (818)
. .. +....++
T Consensus 55 -------------------------------------------------------------------~--~~-~~~~~~~ 64 (684)
T PRK05632 55 -------------------------------------------------------------------A--SG-QLDELLE 64 (684)
T ss_pred -------------------------------------------------------------------h--cc-CChHHHH
Confidence 0 00 1234567
Q ss_pred HHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCCh----HHHHHHHH
Q 003466 196 KVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGG----ISGTISAY 271 (818)
Q Consensus 196 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~----i~~~~~~~ 271 (818)
+|.+.|+++.++ +|++||||++|.........+|+|||+.|++|||||++.+.++ ++++..+.
T Consensus 65 ~I~~~~~~l~~~-------------~D~VLIEGa~~~~~~~~~~~~na~iA~~L~~pVILV~~~~~~si~d~~~~i~~~~ 131 (684)
T PRK05632 65 EIVARYHALAKD-------------CDVVLVEGLDPTRKHPFEFSLNAEIAKNLGAEVVLVSSGGNDTPEELAERIELAA 131 (684)
T ss_pred HHHHHHHHhccC-------------CCEEEEeCcCCCCcCcccCchHHHHHHHhCCCEEEEECCCCCChHHHHHHHHHHH
Confidence 888888776654 9999999998877655566789999999999999999999887 56777788
Q ss_pred HHHH-hCCCcEEEEEEcc--CCCCCHHHHHHhh------------------c-CCCCEEe-cCCCCCCCcchhhhhhhhh
Q 003466 272 ESLK-LRGYDVVAVVFED--HGLVNEVPLMSYL------------------R-NRVPVLV-LPPLPQDSSNDLMEWFDES 328 (818)
Q Consensus 272 ~~l~-~~~~~v~gvi~N~--~~~~~~~~l~~~~------------------~-~~~pvlg-iP~~~~~~~~~~~~~l~~~ 328 (818)
+.+. .++.++.|||+|+ +..+..+.+.+.+ . .++|++| ||+.+.+.++++.+..+.+
T Consensus 132 ~~l~~~~~~~v~GVIvNr~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~LG~IP~d~~L~~~t~~~i~~~L 211 (684)
T PRK05632 132 SSFGGAKNANILGVIINKLNAPVDEQGRTRPDLSEIFDDSSKANVDPSKLFASSPLPLLGVVPWSPDLIAPRVIDIAKHL 211 (684)
T ss_pred HHhccCCCCcEEEEEEECCCCCHHHHHHHHHHHHhhhccccccchhcchhhhcCCCceEEEccCccccCCCCHHHHHHHc
Confidence 8877 7789999999999 4333322222222 1 2899999 9999999999777666655
Q ss_pred hhh
Q 003466 329 HNV 331 (818)
Q Consensus 329 ~~~ 331 (818)
...
T Consensus 212 ~~~ 214 (684)
T PRK05632 212 GAT 214 (684)
T ss_pred CCE
Confidence 433
No 120
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.85 E-value=1.3e-19 Score=200.71 Aligned_cols=304 Identities=13% Similarity=0.098 Sum_probs=198.2
Q ss_pred EeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC----CCCCChhHHHHHHHHHhc
Q 003466 380 DSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF----PENVYEPALECAELLLQG 455 (818)
Q Consensus 380 ~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~----~~~~~~~~~eLae~L~~~ 455 (818)
+++.|. ++. .+|+ +||||.++ +++|+..||+|++|+.+++.+++.... ..+..+...++.+.|+++
T Consensus 4 ~~~~~~--~~~-~~g~----~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 73 (360)
T TIGR00858 4 DRGPGP--EVV-RDGR----RLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEW 73 (360)
T ss_pred ccCCCC--eEE-ECCc----eEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHH
Confidence 456665 454 6899 99999996 579963299999999999988654211 112356788899999998
Q ss_pred cCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCc
Q 003466 456 VGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGF 535 (818)
Q Consensus 456 ~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~ 535 (818)
.+. +..+++++|++++..+++.+ . .+ .+.|.....+|+....++...+....
T Consensus 74 ~~~---~~~i~~~~G~~~~~~~l~~~----~-~~-----------------gd~v~~~~~~~~~~~~~~~~~g~~~~--- 125 (360)
T TIGR00858 74 KGT---EAALLFSSGYLANVGVISAL----V-GK-----------------GDLILSDALNHASLIDGCRLSGARVR--- 125 (360)
T ss_pred hCC---CCEEEECchHHHHHHHHHHh----C-CC-----------------CCEEEEEccccHHHHHHHHhcCCceE---
Confidence 863 46777789999999887654 1 11 23445556677766554443322100
Q ss_pred CCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCC
Q 003466 536 LQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLK 615 (818)
Q Consensus 536 ~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~ 615 (818)
.+| .+|. +.+++.+.. .
T Consensus 126 ---------------------------~~~--------------~~d~------------------~~l~~~~~~----~ 142 (360)
T TIGR00858 126 ---------------------------RYR--------------HNDV------------------EHLERLLEK----N 142 (360)
T ss_pred ---------------------------Eec--------------CCCH------------------HHHHHHHHH----c
Confidence 001 1121 445666652 1
Q ss_pred CCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc--chhcccCCCCc-----EEEec
Q 003466 616 VSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE--TTADLLGCVPD-----IACYG 688 (818)
Q Consensus 616 ~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~--~a~e~~gv~PD-----ivtlg 688 (818)
...+.++|+++++ .+..|...+ +++|.++|++||+++|+||+++ +|+.+.. .....+++.|| +.+++
T Consensus 143 ~~~~~~~v~~~~~-~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~i~s~s 216 (360)
T TIGR00858 143 RGERRKLIVTDGV-FSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLGEDGRGTLEHFGLKPEPVDIQVGTLS 216 (360)
T ss_pred ccCCCeEEEEeCC-ccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcCCCCCchHHhcCCCccCCcEEEEech
Confidence 1135789999997 777786665 8999999999999999999995 5555432 23445677666 66999
Q ss_pred ccccCCccccceeecchHHHhhccCC--------hH----------HHH----------------HHHHHHHHcCCCeeE
Q 003466 689 KLLTGGVIPLAATLATNAVFDSFVGD--------SK----------LWD----------------LELIQQISSHRTVQR 734 (818)
Q Consensus 689 KgLggGy~PlsAvl~~~~i~~~l~~~--------~~----------~~~----------------~~l~~~l~~~~~v~~ 734 (818)
|++++ +.|++++++++++.+... .. .++ +.+.+.+++++. .-
T Consensus 217 K~~~~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~ 292 (360)
T TIGR00858 217 KALGS---YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALGF-TL 292 (360)
T ss_pred hhhhc---cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcCC-cc
Confidence 99875 225688888877654210 00 000 112233444432 11
Q ss_pred EEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec--------CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 735 VVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL--------GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 735 vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~--------g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
....|.++.+.+... ..+.++++.|.++||++.+. ++.+|++++..++++|+++++++|+
T Consensus 293 ~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 293 MPSCTPIVPVIIGDN--------ASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 123455666665321 23567899999999999741 2589999999999999999998763
No 121
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.79 E-value=1.1e-17 Score=184.92 Aligned_cols=296 Identities=13% Similarity=0.073 Sum_probs=186.3
Q ss_pred cceeecccccccccCCCCCCHHHHHHHHHhhhhccccc----CCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHH
Q 003466 399 GQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM----FPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAI 474 (818)
Q Consensus 399 ~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~----~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~ 474 (818)
|+||.|+| +.+|||.+||+|.+|++++++++++.. ...+..+...++.+.|+++++. +..++++||++|+
T Consensus 1 ~~~~~~~~---~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~iv~~sg~~a~ 74 (349)
T cd06454 1 KKVLNFCS---NDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK---EAALVFSSGYAAN 74 (349)
T ss_pred CCceeccc---CCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC---CCEEEeccHHHHH
Confidence 37999998 999999989999999999998865321 1124577889999999999874 4678889999999
Q ss_pred HHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccc
Q 003466 475 EIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVF 554 (818)
Q Consensus 475 e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~ 554 (818)
..+++.+. ..| ..|++ ...+|+....++...|...
T Consensus 75 ~~~~~~~~-----~~g----------------d~Vl~-~~~~~~~~~~~~~~~g~~~----------------------- 109 (349)
T cd06454 75 DGVLSTLA-----GKG----------------DLIIS-DSLNHASIIDGIRLSGAKK----------------------- 109 (349)
T ss_pred HHHHHHhc-----CCC----------------CEEEE-ehhhhHHHHHHHHHcCCce-----------------------
Confidence 98887551 122 24444 5556765443332222110
Q ss_pred ccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCC
Q 003466 555 MYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGG 634 (818)
Q Consensus 555 ~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG 634 (818)
+.+| ..| .+.+++.+.+. .++.+.++|+++++ ++..|
T Consensus 110 -------~~~~--------------~~~------------------~~~le~~i~~~---~~~~~~~~v~~~~~-~~~tG 146 (349)
T cd06454 110 -------RIFK--------------HND------------------MEDLEKLLREA---RRPYGKKLIVTEGV-YSMDG 146 (349)
T ss_pred -------EEec--------------CCC------------------HHHHHHHHHHh---hccCCCeEEEEecc-ccCCC
Confidence 0001 011 13455555431 11356789999997 78888
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccC---CCCcEE--EecccccCCccccceeecchHHH
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLG---CVPDIA--CYGKLLTGGVIPLAATLATNAVF 708 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~g---v~PDiv--tlgKgLggGy~PlsAvl~~~~i~ 708 (818)
...+ +++|.++|++||+++|+||++ ++|..+..+ ....++ ..+|++ +++|.++. +.|.++++++++
T Consensus 147 ~~~~----~~~i~~~~~~~~~~livD~a~-~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~i~~~~~~~ 218 (349)
T cd06454 147 DIAP----LPELVDLAKKYGAILFVDEAH-SVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA---VGGYIAGSKELI 218 (349)
T ss_pred CccC----HHHHHHHHHHcCCEEEEEccc-cccccCCCCCChhhhccccccCcEEEeechhhhcc---cCCEEECCHHHH
Confidence 7765 899999999999999999999 455443211 111222 235765 68999874 335578888876
Q ss_pred hhccCCh-------H--------------HH-------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCC
Q 003466 709 DSFVGDS-------K--------------LW-------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAG 754 (818)
Q Consensus 709 ~~l~~~~-------~--------------~~-------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~ 754 (818)
+.+.... . .+ .+.+.+.+.+++.. .+...+.++......+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~~~~~~~~~~~----- 292 (349)
T cd06454 219 DYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELGFP-VGGSPSHIIPPLIGDD----- 292 (349)
T ss_pred HHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCc-ccCCCCCcEEEEeCCC-----
Confidence 5432210 0 00 01122233333211 1111122222212211
Q ss_pred CchHHHHHHHHHHHhCCceEeec--------CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 755 YGSLYAASLLKKLREDGVYMRPL--------GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 755 ~~~~~a~~~~~~l~e~Gvlv~p~--------g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
...+.++.+.|.++||.+.+. ++.+|+.++...+++|+++++++|+++
T Consensus 293 --~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 293 --PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred --hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 134567889999999999752 368999999989999999999999764
No 122
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.73 E-value=2.6e-16 Score=177.56 Aligned_cols=293 Identities=14% Similarity=0.068 Sum_probs=178.6
Q ss_pred cccccccCCCCCCHHHHHHHHHhhhhc-ccccC-----CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 406 ASWWTQGPDATLQIELARDMGYTAARF-GHVMF-----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 406 sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~-----~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
++++....||+ +|++++++..|+ .. .+... ..+..+...+++++|+++++.+ .+.++++++|+++.+.+++
T Consensus 23 ~~l~~g~~~~~-~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~-~~~v~~~~~g~~~~~~~~~ 99 (398)
T cd00613 23 SFLGSGTYKHN-PPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMD-VANASLQDEATAAAEAAGL 99 (398)
T ss_pred ccccccccCCc-CcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC-ccceeccCchHHHHHHHHH
Confidence 45667789999 999999988877 32 11111 2234467789999999988743 3478888888888898888
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
.+ +.. +++.+.|.+...|||++..++...+... .. ..
T Consensus 100 ~~-~~~------------------~~~gd~Vl~~~~~h~~~~~~~~~~~~~~--g~----------------------~~ 136 (398)
T cd00613 100 AA-IRA------------------YHKRNKVLVPDSAHPTNPAVARTRGEPL--GI----------------------EV 136 (398)
T ss_pred HH-Hhc------------------ccCCCEEEEcCccCcchHHHHHHhcccC--Cc----------------------EE
Confidence 87 321 1123466678889999988887765321 00 00
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
..++.++.+ ..| .+.+++.+. +++++|++++. . ..|.+.
T Consensus 137 ~~v~~~~~~-----------~~d------------------~~~l~~~i~--------~~t~~viv~~~-~-~~G~~~-- 175 (398)
T cd00613 137 VEVPSDEGG-----------TVD------------------LEALKEEVS--------EEVAALMVQYP-N-TLGVFE-- 175 (398)
T ss_pred EEeccCCCC-----------CcC------------------HHHHHHhcC--------CCeEEEEEECC-C-CCceec--
Confidence 011111000 001 144555553 46889999986 5 567763
Q ss_pred HHHHHHHHHHHHhcCCcEEEeecccC---cccCCccchhcccCCCCcEEE--ecc---cccCCccccceee-cchHHHhh
Q 003466 640 PLFQRILVKECQNRKIPVIFDEVFTG---FWRLGVETTADLLGCVPDIAC--YGK---LLTGGVIPLAATL-ATNAVFDS 710 (818)
Q Consensus 640 ~~fl~~LreLc~~~gilLI~DEV~TG---fGRtG~~~a~e~~gv~PDivt--lgK---gLggGy~PlsAvl-~~~~i~~~ 710 (818)
.++++|+++|++||+++|+|++|++ ++++|. + .+|+++ ++| .+|+| .|.++++ +++++++.
T Consensus 176 -~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~------~--~~d~~~~s~~K~~~p~g~G-gp~~g~l~~~~~~~~~ 245 (398)
T cd00613 176 -DLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGE------Y--GADIVVGNLQKTGVPHGGG-GPGAGFFAVKKELVRF 245 (398)
T ss_pred -chHHHHHHHHHhcCCEEEEEeccccccCCCChHH------c--CCCEEEeeccccCCCCCCC-CCceeEEEEhhhhHhh
Confidence 5789999999999999999998853 223332 2 378876 344 45555 3655555 55667665
Q ss_pred ccC------------------------------C-h------H--------------------------HHHHHHHHHHH
Q 003466 711 FVG------------------------------D-S------K--------------------------LWDLELIQQIS 727 (818)
Q Consensus 711 l~~------------------------------~-~------~--------------------------~~~~~l~~~l~ 727 (818)
+.. . . . .+.+.+.+.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~ 325 (398)
T cd00613 246 LPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLK 325 (398)
T ss_pred CCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 311 0 0 0 00011233444
Q ss_pred cCCCeeEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee----cCCEEEEECCCCChHHHHHHHHHHH
Q 003466 728 SHRTVQRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP----LGNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 728 ~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p----~g~~ir~~ppl~~t~edId~~~~~l 801 (818)
+.+...... .....+.+.+... ....+..+++.|+++||++.. .++.+|++|++.+|++|||+++++|
T Consensus 326 ~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 326 EVGGVLPFNGPFFHEFVLRLPPL------YGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred hcCCcccCCCCeeEEEEEEcCCc------chHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 444321010 0111122333210 013467789999999999875 3589999999999999999999864
No 123
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=2e-15 Score=164.64 Aligned_cols=325 Identities=11% Similarity=0.055 Sum_probs=210.3
Q ss_pred EEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCC-CHHHHHHHHHhhhhcccccCC----CCCChhHHHHHHH
Q 003466 377 TVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATL-QIELARDMGYTAARFGHVMFP----ENVYEPALECAEL 451 (818)
Q Consensus 377 ~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~-hp~V~eAi~~q~~~~~~~~~~----~~~~~~~~eLae~ 451 (818)
.++++-.-++=|-|--.|+ ..+.|++.| =++||+++ +-...+++.+.++++++.... .++++.+.++++.
T Consensus 116 ~l~dR~S~D~n~tfk~tG~--~~~~lNlgS---YNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l 190 (519)
T KOG1357|consen 116 DLMDRVSDDYNWTFKYTGT--RSRCLNLGS---YNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEEL 190 (519)
T ss_pred EeeeeeccCCCceEEeccc--eeeeeeecc---cccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHH
Confidence 3444433322233444454 123455555 44666431 445667777777888765422 2457899999999
Q ss_pred HHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC
Q 003466 452 LLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP 531 (818)
Q Consensus 452 L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~ 531 (818)
.+++++. +.++.++.|..+|..-+... ..+...|..+.-.|++...++.++|+..
T Consensus 191 ~A~f~g~---e~a~vF~mGf~TNs~~~p~l----------------------~~~gsLIiSDelNHaSi~~GaRLSgAti 245 (519)
T KOG1357|consen 191 VARFLGV---EDAIVFSMGFATNSMNIPSL----------------------LGKGSLIISDELNHASLITGARLSGATT 245 (519)
T ss_pred HHHhcCC---cceEEEeccccccccCccee----------------------ecCCcceeeccccchheeccccccCceE
Confidence 9999985 56666678888777666644 2345678889999999999888887653
Q ss_pred CCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcC
Q 003466 532 YTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQN 611 (818)
Q Consensus 532 ~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~ 611 (818)
..+ .|||+ +.||++|.+.
T Consensus 246 RVf--------------------------------------------kHNdm------------------~~LEr~Lrd~ 263 (519)
T KOG1357|consen 246 RVF--------------------------------------------RHNDM------------------QGLERLLRDA 263 (519)
T ss_pred EEE--------------------------------------------ecCCH------------------HHHHHHHHHH
Confidence 221 27886 4455555542
Q ss_pred C----CCC-CCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccC--cccCCccchhcccCCCC--
Q 003466 612 P----GLK-VSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTG--FWRLGVETTADLLGCVP-- 682 (818)
Q Consensus 612 ~----~~~-~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TG--fGRtG~~~a~e~~gv~P-- 682 (818)
+ -.. .+.+.-.||+|.+ .++.|.++- |+++.++|++|.+.|++||+|++ .|++| .+.++++|+.|
T Consensus 264 I~~gqP~Thrp~kki~iivegi-ysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tG-rgvce~~g~d~~d 337 (519)
T KOG1357|consen 264 IVYGQPKTHRPWKKILICVEGI-YSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATG-RGVCEYFGVDPED 337 (519)
T ss_pred HhcCCCCcCCcchheeeeeccc-eeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCC-cceeeccCCCchh
Confidence 1 111 2556779999998 888898887 89999999999999999999983 45666 45678888866
Q ss_pred -cEE--Eeccccc--CCccccceeecchHHHhhccCChH-----------HH------------------HHHHHHHHHc
Q 003466 683 -DIA--CYGKLLT--GGVIPLAATLATNAVFDSFVGDSK-----------LW------------------DLELIQQISS 728 (818)
Q Consensus 683 -Div--tlgKgLg--gGy~PlsAvl~~~~i~~~l~~~~~-----------~~------------------~~~l~~~l~~ 728 (818)
||+ |+-|+.| ||| +.++++++++++..+. +. .++..+++.+
T Consensus 338 vDImMGtftKSfga~GGy-----iagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ 412 (519)
T KOG1357|consen 338 VDIMMGTFTKSFGAAGGY-----IAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAE 412 (519)
T ss_pred heeecceehhhcccccce-----ecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHh
Confidence 554 8999887 677 8999999998875543 00 0112223322
Q ss_pred CCCe--eEEEeeeeEEEEEEecCcccCC----CchHHHHHHHHHHHhCCceEee----c----CCEEEEECCCCChHHHH
Q 003466 729 HRTV--QRVVALGTLCAIELQAAGCNAG----YGSLYAASLLKKLREDGVYMRP----L----GNVIYLMCGPCSSPEVC 794 (818)
Q Consensus 729 ~~~v--~~vrg~Gl~~~iel~~~~~~~~----~~~~~a~~~~~~l~e~Gvlv~p----~----g~~ir~~ppl~~t~edI 794 (818)
.... ...+..|+++ ...+.++-. +...+...+.+.|+++++-+.. . ..+.||+.++.||.|++
T Consensus 413 ns~yfr~~l~~~gfiv---yG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~l 489 (519)
T KOG1357|consen 413 NSRYFRWELQKMGFIV---YGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDL 489 (519)
T ss_pred hhHHHHHhhhcCcEEE---ecCCCCCcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHH
Confidence 2221 2233333322 222211111 1223345678889988665542 1 25779999999999999
Q ss_pred HHHHHHHHHHHHH
Q 003466 795 SQLLLKLYQRLEE 807 (818)
Q Consensus 795 d~~~~~l~~~l~~ 807 (818)
|++++.+++.-+.
T Consensus 490 d~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 490 DRALEVIDRVGDE 502 (519)
T ss_pred HHHHHHHhhhchh
Confidence 9999998776533
No 124
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.61 E-value=3.5e-14 Score=158.03 Aligned_cols=194 Identities=12% Similarity=0.035 Sum_probs=133.7
Q ss_pred cccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcc
Q 003466 410 TQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDH 489 (818)
Q Consensus 410 ~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~ 489 (818)
+++||.+.||+|++|+.+++++++ +.++.+.+|+++|+++.+.+ .+.+++++||++||..++.... ..
T Consensus 27 ~~ylgl~~~~~~~~~~~~~~~~~~------g~~~~~~~Le~~lA~~~g~~-~e~ilv~~gg~~a~~~~~~al~-----~~ 94 (346)
T TIGR03576 27 YDLTGLAGGFKIDEEDLELLETYV------GPAIFEEKVQELGREHLGGP-EEKILVFNRTSSAILATILALE-----PP 94 (346)
T ss_pred cccccCCCChhHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHcCCC-cceEEEECCHHHHHHHHHHHhC-----CC
Confidence 568888779999999999999985 35689999999999998743 2789999999999999998661 22
Q ss_pred cccccccCCCccccccceEEEE--EcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcch
Q 003466 490 EVLVDFLGKDTTEKCIELKVLA--LKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEW 567 (818)
Q Consensus 490 G~~~~~~~~~~~~~~~r~~II~--~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~ 567 (818)
| ..|+. .+..+|.+...++.+.|...+.
T Consensus 95 g----------------d~Vli~~~d~p~~~s~~~~~~l~ga~~~~---------------------------------- 124 (346)
T TIGR03576 95 G----------------RKVVHYLPEKPAHPSIPRSCKLAGAEYFE---------------------------------- 124 (346)
T ss_pred C----------------CEEEECCCCCCCchhHHHHHHHcCCEEec----------------------------------
Confidence 2 24443 3456888766666555432100
Q ss_pred hhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHH
Q 003466 568 LYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILV 647 (818)
Q Consensus 568 ~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~Lr 647 (818)
++|+ +.++. . .+..+|++++. ++.|.+. +...+++|.
T Consensus 125 ------------~~~l------------------~~l~~-~---------~~~~lIiitg~--s~~G~v~-~~~~L~~i~ 161 (346)
T TIGR03576 125 ------------SDEL------------------SELKK-I---------DGTSLVVITGS--TMDLKVV-SEEDLKRVI 161 (346)
T ss_pred ------------cCCH------------------HHHhh-C---------cCceEEEEECC--CCCCccc-CHHHHHHHH
Confidence 1111 11211 1 12356777773 5667766 578899999
Q ss_pred HHHHhcCCcEEEeecccCcccCCcc--chhcccCCCCcEE--EecccccCCccccceeecchHHHhhccC
Q 003466 648 KECQNRKIPVIFDEVFTGFWRLGVE--TTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNAVFDSFVG 713 (818)
Q Consensus 648 eLc~~~gilLI~DEV~TGfGRtG~~--~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~i~~~l~~ 713 (818)
++|++||+++|+||++ +.|..|.. +....++ +|++ ++||+|+|. -+|.+++++++++.+..
T Consensus 162 ~la~~~~~~livDEAy-~~~~~~~~~~~~~~~~~--~divv~s~SKalaG~--r~G~v~~~~~li~~l~~ 226 (346)
T TIGR03576 162 KQAKSKEAIVLVDDAS-GARVRRLYGQPPALDLG--ADLVVTSTDKLMDGP--RGGLLAGRKELVDKIKS 226 (346)
T ss_pred HHHHHcCCEEEEECCc-cccccccCCCCCHHHcC--CcEEEeccchhcccc--ceEEEEeCHHHHHHHHH
Confidence 9999999999999999 44443321 1122334 4654 899998663 36679999999887654
No 125
>PLN02721 threonine aldolase
Probab=99.61 E-value=1.1e-13 Score=153.19 Aligned_cols=306 Identities=14% Similarity=0.060 Sum_probs=181.9
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
+++|+.++.+. .. +|.+.+|+.+. +..... .+..+...+|.+.|+++++. +.+++++||++++..++.
T Consensus 6 ~~~~~~~~~~~----~~-~~~~~~a~~~~--~~~~~~--~~~~~~~~~l~~~la~~~~~---~~~~~~~~Gs~a~~~~l~ 73 (353)
T PLN02721 6 RVVDLRSDTVT----KP-TDAMRAAMANA--EVDDDV--LGYDPTALRLEEEMAKIFGK---EAALFVPSGTMGNLISVL 73 (353)
T ss_pred hhhhhhccccc----CC-CHHHHHHHHhc--cCCCcc--cCCCHHHHHHHHHHHHHhCC---ceeEEecCccHHHHHHHH
Confidence 67899886655 35 89999999864 111111 12356678999999999973 568899999999988887
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCcc-c-cccccCCCCCCCcCCCCcccCCCcccCCCcccccC
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTL-G-AMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYN 557 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~-~-als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 557 (818)
... ...| ..|+..+.+|.+... + .....|..
T Consensus 74 ~~~----~~~g----------------d~Vl~~~~~~~~~~~~~~~~~~~g~~--------------------------- 106 (353)
T PLN02721 74 VHC----DVRG----------------SEVILGDNSHIHLYENGGISTLGGVH--------------------------- 106 (353)
T ss_pred HHc----cCCC----------------CeEEEcCccceehhcccchhhhcCce---------------------------
Confidence 651 1122 256766665421110 0 01111110
Q ss_pred cceeecCcchhhhhccccccccc-cCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcc
Q 003466 558 SKWILSLPEWLYSKIVEHKDITF-CSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMH 636 (818)
Q Consensus 558 ~~~~v~~P~~~~~~~~~~~~~~~-nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~ 636 (818)
.+.+|... + + .| .+.+++.+.+.. ..+..+.++|+++++ ++..|..
T Consensus 107 ---~~~v~~~~--------~--~~~d------------------~~~l~~~i~~~~-~~~~~~~~~v~l~~~-~~np~G~ 153 (353)
T PLN02721 107 ---PRTVKNNE--------D--GTMD------------------LDAIEAAIRPKG-DDHFPTTRLICLENT-HANCGGR 153 (353)
T ss_pred ---eEecCCCc--------C--CCcC------------------HHHHHHHHHhcc-CCCCCcceEEEEecc-ccccCCc
Confidence 00011000 0 0 01 145666664210 012246789999997 5554444
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCc--EEEecccccCCccccce-eecchHHHhhcc
Q 003466 637 MVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPD--IACYGKLLTGGVIPLAA-TLATNAVFDSFV 712 (818)
Q Consensus 637 ~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PD--ivtlgKgLggGy~PlsA-vl~~~~i~~~l~ 712 (818)
.+|.+++++|.++|++||+++|+||++. ++-..... .........| +++++|++++ |+|+ +++++++++.+.
T Consensus 154 ~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~ 229 (353)
T PLN02721 154 CLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIVGSKSFIRKAK 229 (353)
T ss_pred cccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhCCEEEEecccccCC---ceeeEEecCHHHHHhHH
Confidence 5589999999999999999999999984 33211000 0000111234 4689999974 5665 567777766421
Q ss_pred ---C----C----hH--------------HH------HHHHHHHHHcCCCee-EE-EeeeeEEEEEEecCcccCCCchHH
Q 003466 713 ---G----D----SK--------------LW------DLELIQQISSHRTVQ-RV-VALGTLCAIELQAAGCNAGYGSLY 759 (818)
Q Consensus 713 ---~----~----~~--------------~~------~~~l~~~l~~~~~v~-~v-rg~Gl~~~iel~~~~~~~~~~~~~ 759 (818)
. . .. .+ .+.+.+.+++.+.+. .+ ...+.++.+.+.... ...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 303 (353)
T PLN02721 230 RLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS------RIT 303 (353)
T ss_pred HHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc------ccc
Confidence 1 0 00 00 012334445554331 11 222445556554210 012
Q ss_pred HHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
+..+++.|.++||.+++.+ +.+|+++++.++++|+++++++|++++..
T Consensus 304 ~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 304 AEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred HHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 5678999999999999876 78999999899999999999999988754
No 126
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.56 E-value=1.5e-13 Score=154.21 Aligned_cols=295 Identities=13% Similarity=0.048 Sum_probs=170.5
Q ss_pred HHHHHHHHhhhhcccccC----C-----CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccc
Q 003466 420 ELARDMGYTAARFGHVMF----P-----ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHE 490 (818)
Q Consensus 420 ~V~eAi~~q~~~~~~~~~----~-----~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G 490 (818)
.+.+|+.+++++++..+. . ...++...++.|.|+++++ .+.+.++++|++|+..++.... ..|
T Consensus 19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g---~~~~~i~~g~~~a~~~~~~~l~-----~~g 90 (370)
T TIGR02539 19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG---MDEARVTHGAREGKFAVMHALC-----KEG 90 (370)
T ss_pred CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC---CCceEEECChHHHHHHHHHHhh-----CCC
Confidence 456667777776654321 1 1224467788888999998 4678889999999999887651 111
Q ss_pred ccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhh
Q 003466 491 VLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYS 570 (818)
Q Consensus 491 ~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~ 570 (818)
..|+ .+..-|.+.+.++...|.+... +|....
T Consensus 91 ----------------d~Vl-~~~~~h~s~~~~~~~~g~~~~~------------------------------~~~~~~- 122 (370)
T TIGR02539 91 ----------------DWVV-LDGLAHYTSYVAAERAGLNVKE------------------------------VPHTGH- 122 (370)
T ss_pred ----------------CEEE-ECCcccHHHHHHHHHcCCEEEE------------------------------EecCCc-
Confidence 2444 4555555555544444332111 110000
Q ss_pred hccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHH
Q 003466 571 KIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKEC 650 (818)
Q Consensus 571 ~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc 650 (818)
.+. ..| .+.+++.+.... .....+..+|+++-+ .+..|...+ +++|.++|
T Consensus 123 -----~~~-~~d------------------~~~l~~~l~~~~-~~~~~~~~lv~~~~p-~~~~G~~~~----l~~i~~la 172 (370)
T TIGR02539 123 -----PEY-KVD------------------PEGYGEVIEEVE-DESGKPPVLALLTHV-DGEYGNLPD----AGKVAKVC 172 (370)
T ss_pred -----ccC-CcC------------------HHHHHHHHHHhh-hccCCCcEEEEEECC-CCCCccccC----HHHHHHHH
Confidence 000 011 145556664210 001134567777754 677787776 89999999
Q ss_pred HhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCccccceeecchHHHhhccCCh-------------
Q 003466 651 QNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNAVFDSFVGDS------------- 715 (818)
Q Consensus 651 ~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~i~~~l~~~~------------- 715 (818)
++||+++|+||+|. +|..+.-+. ...+|++ +++|++++| .|+|.+++++++++.+....
T Consensus 173 ~~~~~~livDea~~-~g~~~~~~~----~~~~di~v~s~sK~~~~~-g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~ 246 (370)
T TIGR02539 173 REKGVPLLLNCAYT-VGRMPVSAK----EIGADFIVGSGHKSMAAS-GPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGC 246 (370)
T ss_pred HHcCCeEEEECccc-cCCcCCCHH----HcCCCEEEeeCcccccCC-CCEEEEEECHHHHhhhcccccCCccceeeeecc
Confidence 99999999999994 554332211 1236765 899999876 58899999999988765421
Q ss_pred -----H------HH---H-------------HHHHHHHHcCCCe-eEE-EeeeeEEEEEEecCcccCCCchHHHHHHHHH
Q 003466 716 -----K------LW---D-------------LELIQQISSHRTV-QRV-VALGTLCAIELQAAGCNAGYGSLYAASLLKK 766 (818)
Q Consensus 716 -----~------~~---~-------------~~l~~~l~~~~~v-~~v-rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~ 766 (818)
. .+ . +.+.+.|++.+.. ..+ .....++.+++.........+...+..+.+.
T Consensus 247 ~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~ 326 (370)
T TIGR02539 247 TSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEE 326 (370)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHH
Confidence 0 01 0 1122333333321 001 1112222233210000000011234568899
Q ss_pred HHhCCce-EeecC-CEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 767 LREDGVY-MRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 767 l~e~Gvl-v~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
|+++||+ +++.. +.+|++. ..+|++|+++++++|++.+++
T Consensus 327 L~e~GI~~ir~~~~~~iRis~-~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 327 LKKRGIHGIRSGQTKYFKLSV-YGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHhCCCccccCCcceEEEEEe-cCCCHHHHHHHHHHHHHHHHh
Confidence 9999998 66643 5899997 468999999999999988765
No 127
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.56 E-value=5.5e-13 Score=150.64 Aligned_cols=305 Identities=11% Similarity=0.018 Sum_probs=180.8
Q ss_pred ccCCCCCCHHHHHHHHHhhhhcccc-----cCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHh
Q 003466 411 QGPDATLQIELARDMGYTAARFGHV-----MFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKF 485 (818)
Q Consensus 411 ~~lGh~~hp~V~eAi~~q~~~~~~~-----~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~ 485 (818)
.-+|.- .+++++|+.+....++.. .......+...++.++++++++. +.++|+++|++|+..|++...
T Consensus 27 ~~~~p~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~---~~~~~~~g~t~a~~~al~~l~--- 99 (387)
T PRK09331 27 QRGGIL-TPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM---DEARVTHGAREGKFAVMHSLC--- 99 (387)
T ss_pred hcCCCC-CHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHhc---
Confidence 457877 899999999887544321 11122356788999999999984 678999999999999998661
Q ss_pred hhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCc
Q 003466 486 SFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLP 565 (818)
Q Consensus 486 t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P 565 (818)
.+| .+|++- ...|-+...++...|.... .++.+
T Consensus 100 --~~g----------------d~Vlv~-~~~h~s~~~~~~~~G~~~~----------------------------~v~~~ 132 (387)
T PRK09331 100 --KKG----------------DYVVLD-GLAHYTSYVAAERAGLNVR----------------------------EVPKT 132 (387)
T ss_pred --CCC----------------CEEEEC-CCchHHHHHHHHHcCCEEE----------------------------EEeCc
Confidence 222 245554 4455555444433332110 01110
Q ss_pred -c-hhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHH
Q 003466 566 -E-WLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQ 643 (818)
Q Consensus 566 -~-~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl 643 (818)
+ .+ ..| .+.+++.+.... .....++.+|+++.+ .+..|...+ +
T Consensus 133 ~~~~~-----------~~d------------------~~~l~~~l~~~~-~~~~~~~~lV~l~~~-~~~tG~~~~----l 177 (387)
T PRK09331 133 GYPEY-----------KIT------------------PEAYAEKIEEVK-EETGKPPALALLTHV-DGNYGNLAD----A 177 (387)
T ss_pred cCcCC-----------CcC------------------HHHHHHHHHHhh-hccCCCCEEEEEECC-CCCCccccc----H
Confidence 0 00 111 145556664200 011246788888876 777787765 9
Q ss_pred HHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC---------
Q 003466 644 RILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD--------- 714 (818)
Q Consensus 644 ~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~--------- 714 (818)
++|.++|++||+++|+|++| ++|..+.- ...+|+.-.+.++.|.++++ .++|.+++++++++.+...
T Consensus 178 ~~I~~la~~~g~~livD~a~-~~g~~~~~--~~~~g~D~~~~s~~K~l~~~-~~~G~l~~~~~~i~~~~~~~~~~~~~~~ 253 (387)
T PRK09331 178 KKVAKVAHEYGIPFLLNGAY-TVGRMPVD--GKKLGADFIVGSGHKSMAAS-APSGVLATTEEYADKVFRTSRKFGVKEV 253 (387)
T ss_pred HHHHHHHHHcCCEEEEECCc-ccCCcCCC--HHHcCCCEEEeeCcccccCC-CCEEEEEECHHHHhhcccccCCCcccce
Confidence 99999999999999999999 45543321 12345533345789999876 5889899999988765331
Q ss_pred ------h---H---------HHH-------------HHHHHHHHcCCCeeEE---EeeeeEEEEEEecCcccCCCchHHH
Q 003466 715 ------S---K---------LWD-------------LELIQQISSHRTVQRV---VALGTLCAIELQAAGCNAGYGSLYA 760 (818)
Q Consensus 715 ------~---~---------~~~-------------~~l~~~l~~~~~v~~v---rg~Gl~~~iel~~~~~~~~~~~~~a 760 (818)
. . .+. +.+.+.+++.+.+.-+ .....++.++...-..........+
T Consensus 254 ~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 333 (387)
T PRK09331 254 ELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRG 333 (387)
T ss_pred eeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccc
Confidence 0 0 000 1122334444322211 1112223333210000000001124
Q ss_pred HHHHHHHHhCCceEe-ecCCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 761 ASLLKKLREDGVYMR-PLGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 761 ~~~~~~l~e~Gvlv~-p~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
..+.+.|.++||+.. +....++...+..+|++|+++++++|+++++++
T Consensus 334 ~~~~~~L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 334 FFLYEELKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred hhHHHHHHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 568899999999954 344555555556689999999999999887764
No 128
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.55 E-value=2.2e-13 Score=149.42 Aligned_cols=173 Identities=16% Similarity=0.113 Sum_probs=120.8
Q ss_pred CCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch----hcccCCCCcEEEeccccc
Q 003466 617 SGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT----ADLLGCVPDIACYGKLLT 692 (818)
Q Consensus 617 ~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a----~e~~gv~PDivtlgKgLg 692 (818)
..++++|++++. ++..|.+. |.+.+++|.++|+++|+++|+||++++++..|.... ....+....+.+++|.++
T Consensus 130 ~~~~~~v~i~~~-~~~tG~~~-~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~ 207 (350)
T cd00609 130 TPKTKLLYLNNP-NNPTGAVL-SEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFG 207 (350)
T ss_pred CccceEEEEECC-CCCCCccc-CHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccC
Confidence 357899999995 88888866 788999999999999999999999998876665432 222222222347999998
Q ss_pred -CCccccceeecch-HHHhhccCChH--------------------H-------------HHHHHHHHHHcCCCee-EEE
Q 003466 693 -GGVIPLAATLATN-AVFDSFVGDSK--------------------L-------------WDLELIQQISSHRTVQ-RVV 736 (818)
Q Consensus 693 -gGy~PlsAvl~~~-~i~~~l~~~~~--------------------~-------------~~~~l~~~l~~~~~v~-~vr 736 (818)
+| .++|++++++ ++.+.+..... . ..+.+.+.+++.+... ...
T Consensus 208 ~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 286 (350)
T cd00609 208 LPG-LRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKP 286 (350)
T ss_pred Ccc-cceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC
Confidence 77 6999999999 77776543211 0 0012334445544332 334
Q ss_pred eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 737 ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 737 g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
..|.++.+.+... ..+..+.+.|.++||++.+. ++.+|+.++.. ++||++++++|+
T Consensus 287 ~~g~~~~~~~~~~--------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 287 SGGFFLWLDLPEG--------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred CccEEEEEecCCC--------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 5566666666432 12445666777889999864 37899999987 899999999885
No 129
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.54 E-value=1.1e-12 Score=146.55 Aligned_cols=289 Identities=15% Similarity=0.080 Sum_probs=166.4
Q ss_pred CCCCCHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccccc
Q 003466 414 DATLQIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVL 492 (818)
Q Consensus 414 Gh~~hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~ 492 (818)
-|. ||++++|+.++++... .........+...++.++|+++++.+ -..++|+++|++||+.|++.+ +....+
T Consensus 30 ~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~~~~~ggt~a~~~a~~~~-~~~~~~---- 102 (371)
T PRK13520 30 TEP-HPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLP-DAYGYITSGGTEANIQAVRAA-RNLAKA---- 102 (371)
T ss_pred cCc-hHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCC-CCCeEEecCcHHHHHHHHHHH-HhhccC----
Confidence 456 9999999999887632 22111123444578889999988743 235788999999999999987 322111
Q ss_pred ccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhc
Q 003466 493 VDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKI 572 (818)
Q Consensus 493 ~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~ 572 (818)
++.+||..+.++.. ...++...|.. ...++.+..+
T Consensus 103 ------------~~~~vl~~~~~h~s-~~~~~~~~g~~----------------------------~~~v~~~~~~---- 137 (371)
T PRK13520 103 ------------EKPNIVVPESAHFS-FDKAADMLGVE----------------------------LRRAPLDDDY---- 137 (371)
T ss_pred ------------CCceEEecCcchHH-HHHHHHHcCce----------------------------EEEecCCCCC----
Confidence 12367776654432 21111111111 0111111100
Q ss_pred cccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHh
Q 003466 573 VEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQN 652 (818)
Q Consensus 573 ~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~ 652 (818)
..| .+.+++.+.. +....+++.+ .+..|.+.+ +++|.++|++
T Consensus 138 -------~~d------------------~~~l~~~i~~-------~~~~vi~~~~--~~~tG~~~~----l~~I~~l~~~ 179 (371)
T PRK13520 138 -------RVD------------------VKAVEDLIDD-------NTIGIVGIAG--TTELGQVDP----IPELSKIALE 179 (371)
T ss_pred -------cCC------------------HHHHHHHHhh-------CCEEEEEEcC--CcCCcccCC----HHHHHHHHHH
Confidence 111 2566777752 2223344444 355677776 9999999999
Q ss_pred cCCcEEEeecccCcc----cCCccchhcccCCCCcEEEe--cccccCCccccceeec-chHHHhhccCC-----------
Q 003466 653 RKIPVIFDEVFTGFW----RLGVETTADLLGCVPDIACY--GKLLTGGVIPLAATLA-TNAVFDSFVGD----------- 714 (818)
Q Consensus 653 ~gilLI~DEV~TGfG----RtG~~~a~e~~gv~PDivtl--gKgLggGy~PlsAvl~-~~~i~~~l~~~----------- 714 (818)
||+++|+||+|+|+. +.+..+.....+ .|.+++ -|.+.+| .|+|+++. ++++++.+...
T Consensus 180 ~g~~livD~a~~~~~~~~~~~~~~~~~~~~~--vd~~~~s~~K~~~a~-~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~ 256 (371)
T PRK13520 180 NGIFLHVDAAFGGFVIPFLDDPPNFDFSLPG--VDSITIDPHKMGLAP-IPAGGILFRDESYLDALAVDTPYLTSKKQAT 256 (371)
T ss_pred cCCCEEEEecchhHHHHhhcCCCCccccCCC--CceEEECCccccCcc-CCceEEEEcCHHHHHhhcccCccccCCCCcc
Confidence 999999999998652 222112222222 465553 3644445 68887776 45565543210
Q ss_pred -------hH---------HH-H--------------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHH
Q 003466 715 -------SK---------LW-D--------------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASL 763 (818)
Q Consensus 715 -------~~---------~~-~--------------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~ 763 (818)
.. .+ . +.+.+.+++.+.-.-+.....++.+.+. + +..+
T Consensus 257 ~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~-~----------~~~v 325 (371)
T PRK13520 257 LTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEPVLNIVAFDDP-N----------PDEV 325 (371)
T ss_pred eEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCceEEEEecC-C----------HHHH
Confidence 00 00 0 1122333333211011112234444432 1 4578
Q ss_pred HHHHHhCCceEeec--CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 764 LKKLREDGVYMRPL--GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 764 ~~~l~e~Gvlv~p~--g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
.+.|.++||++.+. +..+|++++..+|++||++++++|+++++
T Consensus 326 ~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 326 REKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 88999999999875 36799988878999999999999988764
No 130
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.53 E-value=1.6e-12 Score=145.63 Aligned_cols=294 Identities=14% Similarity=0.116 Sum_probs=176.2
Q ss_pred eeecccccccccCCCCCCHHHHHHHHHhhhhc----ccccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHH
Q 003466 401 QFDACASWWTQGPDATLQIELARDMGYTAARF----GHVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIE 475 (818)
Q Consensus 401 ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~----~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e 475 (818)
.||+..+ .+.++ . .|.+++|+.+++... ..+.. .+..+....+++.+.+..+.+ .-+.+++++++++|..
T Consensus 28 ~i~l~~~--~~~~~-~-~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~ 102 (368)
T PRK03317 28 PVRLNTN--ENPYP-P-SPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQ 102 (368)
T ss_pred eeEecCC--CCCCC-C-CHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHH
Confidence 4665542 12333 3 789999999886532 11111 122334555566655432311 1257999999999998
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.+++.. .+.| ..|+...-+|++....+ ...|..
T Consensus 103 ~~~~~~-----~~~g----------------d~v~v~~P~y~~~~~~~-~~~g~~------------------------- 135 (368)
T PRK03317 103 QLLQAF-----GGPG----------------RTALGFVPSYSMHPIIA-RGTHTE------------------------- 135 (368)
T ss_pred HHHHHh-----cCCC----------------CEEEEeCCChHHHHHHH-HhcCCe-------------------------
Confidence 888865 1222 25888888887643221 111111
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
.+++|..- +. -.| .+.+++.+.. .+..+|++... ++..|.
T Consensus 136 -----~~~~~~~~--------~~-~~d------------------~~~l~~~~~~-------~~~~~i~l~~p-~NPtG~ 175 (368)
T PRK03317 136 -----WVEGPRAA--------DF-TLD------------------VDAAVAAIAE-------HRPDVVFLTSP-NNPTGT 175 (368)
T ss_pred -----eEEcccCC--------CC-CCC------------------HHHHHHHHhc-------cCCCEEEEeCC-CCCCCC
Confidence 01111000 00 001 1456666642 12334444443 787888
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCccccceeecchHHHhhc
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVIPLAATLATNAVFDSF 711 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~PlsAvl~~~~i~~~l 711 (818)
+.+ .++++++|+.+++++|+||++++|++.|.....+.++..|+++ +|||++| .| +++|++++++++++.+
T Consensus 176 ~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~~~~~~~~~~l 250 (368)
T PRK03317 176 ALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAG-GRLGYLAAAPAVVDAL 250 (368)
T ss_pred CCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccch-hhhhhhhCCHHHHHHH
Confidence 886 7788888888899999999999998777655555556678877 8999998 68 7999999999998876
Q ss_pred cCChH--------------HH------H----------HHHHHHHHcCCCeeEEEeeeeEEEE-EEecCcccCCCchHHH
Q 003466 712 VGDSK--------------LW------D----------LELIQQISSHRTVQRVVALGTLCAI-ELQAAGCNAGYGSLYA 760 (818)
Q Consensus 712 ~~~~~--------------~~------~----------~~l~~~l~~~~~v~~vrg~Gl~~~i-el~~~~~~~~~~~~~a 760 (818)
..... .+ . +.+.+.++.++. .-....|.++-+ .+ . .+
T Consensus 251 ~~~~~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~-~----------~~ 318 (368)
T PRK03317 251 RLVRLPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRELGL-RVAPSDANFVLFGRF-A----------DR 318 (368)
T ss_pred HhcCCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCC-EeCCCCCcEEEEecc-C----------CH
Confidence 53211 00 0 112233333332 112223333322 11 1 14
Q ss_pred HHHHHHHHhCCceEeecC--CEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 761 ASLLKKLREDGVYMRPLG--NVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 761 ~~~~~~l~e~Gvlv~p~g--~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
..+++.|+++||++.+.+ +.+|++. .+++++++++++|+++++
T Consensus 319 ~~~~~~l~~~Gv~v~~~~~~~~iRi~~---~~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 319 HAVWQGLLDRGVLIRDVGIPGWLRVTI---GTPEENDAFLAALAEVLA 363 (368)
T ss_pred HHHHHHHHHCCEEEEeCCCCCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence 568889999999999854 6888885 367899999999988764
No 131
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.52 E-value=1.5e-12 Score=148.53 Aligned_cols=286 Identities=10% Similarity=0.037 Sum_probs=163.6
Q ss_pred CHHHHHHHHHhh-hhccccc----CCCCCChhHHHHHH----HHHhccCCCCCCcE-EEeCChhHHHHHHHHHHHHHhhh
Q 003466 418 QIELARDMGYTA-ARFGHVM----FPENVYEPALECAE----LLLQGVGKGWASRA-YFSDNGSTAIEIALKMAFRKFSF 487 (818)
Q Consensus 418 hp~V~eAi~~q~-~~~~~~~----~~~~~~~~~~eLae----~L~~~~~~~~l~~v-~f~~SGseA~e~ALklA~r~~t~ 487 (818)
||++++|+..++ .+++... ..++ ++.+.+|++ +++++++. +.+ ++++||+.||.+++....
T Consensus 41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~---~~alv~~~SG~~A~~~~l~al~----- 111 (416)
T PRK13034 41 SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGC---DYANVQPHSGSQANGAVYLALL----- 111 (416)
T ss_pred CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCC---CceEEecCCcHHHHHHHHHHhc-----
Confidence 899999999995 8886532 1223 688899998 99999984 566 456999999999998651
Q ss_pred cccccccccCCCccccccceEEEEEcCCCCCC-ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcc
Q 003466 488 DHEVLVDFLGKDTTEKCIELKVLALKGSYHGD-TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPE 566 (818)
Q Consensus 488 ~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~-t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~ 566 (818)
.+| ..||+-+. .||. ...++..+... .++.. ..++. -+.
T Consensus 112 ~~G----------------D~Vl~~~~-~~~~~~~~g~~~~~~~--------~~~~~--~~~~~-------------~~~ 151 (416)
T PRK13034 112 KPG----------------DTILGMSL-SHGGHLTHGAKVSLSG--------KWYNA--VQYGV-------------DRL 151 (416)
T ss_pred CCC----------------CEEEEcCc-cceeeeecCCcceecc--------ceeee--EEccc-------------ccc
Confidence 222 24555555 4543 22121111000 00000 00000 000
Q ss_pred hhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCCcccCCHHHHHH
Q 003466 567 WLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALII-EPVVHAAGGMHMVDPLFQRI 645 (818)
Q Consensus 567 ~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG~~~~p~~fl~~ 645 (818)
. ..+|+ +.+++.+.. .+..+|++ +++ .+ +..+ +++
T Consensus 152 ~-----------~~~d~------------------~~le~~l~~-------~~~klVi~~~~~-~g---~~~d----l~~ 187 (416)
T PRK13034 152 T-----------GLIDY------------------DEVEELAKE-------HKPKLIIAGFSA-YP---RELD----FAR 187 (416)
T ss_pred c-----------CCcCH------------------HHHHHHHhh-------cCCeEEEECCCc-cc---cccC----HHH
Confidence 0 01221 456666642 12457777 575 34 3333 889
Q ss_pred HHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCccccceeecchH-HHhhcc---CCh----
Q 003466 646 LVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNA-VFDSFV---GDS---- 715 (818)
Q Consensus 646 LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~-i~~~l~---~~~---- 715 (818)
|.++|++||++||+|++| ++|-+|.......++ ..|++ +++|.|+|+ ..|+++++++ +.+.+. ..+
T Consensus 188 l~~la~~~g~~livD~Ah-a~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~~~~~~~~~~~~ 263 (416)
T PRK13034 188 FREIADEVGALLMVDMAH-IAGLVAAGEHPNPFP-HAHVVTTTTHKTLRGP--RGGMILTNDEEIAKKINSAVFPGLQGG 263 (416)
T ss_pred HHHHHHHcCCEEEEeCcc-cccCcccCCCCCCCC-CceEEEEeCcccCCCC--CCeEEEECcHHHHHHHHhhcCCcccCC
Confidence 999999999999999999 677776532111112 36766 678999764 2455666543 333221 111
Q ss_pred -H-------------HH-------HH-------HHHHHHHcCCCeeEEE--eeeeEEEEEEecCcccCCCchHHHHHHHH
Q 003466 716 -K-------------LW-------DL-------ELIQQISSHRTVQRVV--ALGTLCAIELQAAGCNAGYGSLYAASLLK 765 (818)
Q Consensus 716 -~-------------~~-------~~-------~l~~~l~~~~~v~~vr--g~Gl~~~iel~~~~~~~~~~~~~a~~~~~ 765 (818)
. .+ .+ .+.+.+++.+. .-+. ....+..+.+.... .....+.+
T Consensus 264 ~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~-~~~~~~~~t~i~~v~~~~~~-------~~~~~~~~ 335 (416)
T PRK13034 264 PLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGY-DLVSGGTDNHLLLVDLRPKG-------LSGKDAEQ 335 (416)
T ss_pred ccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCC-EeccCCCCCcEEEEEcCCCC-------CCHHHHHH
Confidence 0 11 11 12222332221 1010 12344444444321 12344567
Q ss_pred HHHhCCceEee-----------cCCEEEEECCC----CChHHHHHHHHHHHHHHHHHH
Q 003466 766 KLREDGVYMRP-----------LGNVIYLMCGP----CSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 766 ~l~e~Gvlv~p-----------~g~~ir~~ppl----~~t~edId~~~~~l~~~l~~l 808 (818)
.|.++||++.+ ....||+.++. .++++||++++++|++++...
T Consensus 336 ~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 336 ALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred HHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 88899999974 12579999888 788999999999999998753
No 132
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.50 E-value=4e-12 Score=143.09 Aligned_cols=305 Identities=12% Similarity=0.120 Sum_probs=183.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
.+||+..+ .+.++ . +|++.+|+.+++.......+ ....-..+|.+.+++.++-. .+.++++++|++|+..+++
T Consensus 29 ~~i~l~~~--~~~~~-~-~~~~~~a~~~~~~~~~~~~y--~~~~g~~~lr~~ia~~l~~~-~~~v~~~~g~t~al~~~~~ 101 (380)
T PRK06225 29 EMIWMGQN--TNHLG-P-HEEVREAMIRCIEEGEYCKY--PPPEGFPELRELILKDLGLD-DDEALITAGATESLYLVMR 101 (380)
T ss_pred CeEEccCC--CCCCC-C-CHHHHHHHHHHHhcCCCCCC--CCCcchHHHHHHHHHhcCCC-CCcEEEeCCHHHHHHHHHH
Confidence 67777653 23444 4 79999999998875321111 11223466778888877643 3589999999999999988
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
... ..| ..|+..+.+|+... ..+...|..
T Consensus 102 ~~~-----~~g----------------d~vl~~~p~y~~~~-~~~~~~g~~----------------------------- 130 (380)
T PRK06225 102 AFL-----SPG----------------DNAVTPDPGYLIID-NFASRFGAE----------------------------- 130 (380)
T ss_pred Hhc-----CCC----------------CEEEEcCCCCcchH-HHHHHhCce-----------------------------
Confidence 651 111 35888888777432 112222211
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEE-EEEccccccCCCcccC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGA-LIIEPVVHAAGGMHMV 638 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV~~g~gG~~~~ 638 (818)
.+.+|-. ++. ..+. -+ .+.+++.+. +++.+ +++.| +...|...
T Consensus 131 -~~~v~~~-------------~~~-~~~~--~d--------~~~l~~~~~--------~~~~~v~l~~p--~NptG~~~- 174 (380)
T PRK06225 131 -VIEVPIY-------------SEE-CNYK--LT--------PELVKENMD--------ENTRLIYLIDP--LNPLGSSY- 174 (380)
T ss_pred -EEeeccc-------------ccc-CCcc--CC--------HHHHHhhcC--------CCceEEEEeCC--CCCCCcCC-
Confidence 0111100 000 0000 00 134554443 23444 45667 46667766
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcc-cCCCCcEEEeccccc-CCccccceeecchHHHhhccCChH
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADL-LGCVPDIACYGKLLT-GGVIPLAATLATNAVFDSFVGDSK 716 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~-~gv~PDivtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~~ 716 (818)
+.+.+++|.++|++||+++|+||++..|. .+....... .....++.++||.+| .| +.+|++++++++++.+.....
T Consensus 175 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~i~~~s~SK~~g~~G-~RiG~i~~~~~l~~~~~~~~~ 252 (380)
T PRK06225 175 TEEEIKEFAEIARDNDAFLLHDCTYRDFA-REHTLAAEYAPEHTVTSYSFSKIFGMAG-LRIGAVVATPDLIEVVKSIVI 252 (380)
T ss_pred CHHHHHHHHHHHHHCCcEEEEehhHHHHh-ccCCchhhcCCCCEEEEeechhhcCCcc-ceeEEEecCHHHHHHHHHHHh
Confidence 78899999999999999999999998763 222111111 011234668999997 67 799999999998876542110
Q ss_pred ---------------HH------HH-----------HHHHHHHcCCCe--eEEEeeeeEEEEEEecCcccCCCchHHHHH
Q 003466 717 ---------------LW------DL-----------ELIQQISSHRTV--QRVVALGTLCAIELQAAGCNAGYGSLYAAS 762 (818)
Q Consensus 717 ---------------~~------~~-----------~l~~~l~~~~~v--~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~ 762 (818)
.+ .+ .+.+.+++++.+ ......|.++.+++.... .....
T Consensus 253 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~ 325 (380)
T PRK06225 253 NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG-------IDPED 325 (380)
T ss_pred cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc-------CCHHH
Confidence 00 00 122334443332 223345667777764321 12456
Q ss_pred HHHHHHhCCceEeec-------C-CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 763 LLKKLREDGVYMRPL-------G-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 763 ~~~~l~e~Gvlv~p~-------g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+++.|.++||+++++ + +.+|+.. ..+++++++++++|.++++++.
T Consensus 326 l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~--~~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 326 LVEYLLERKIFVRQGTYTSKRFGDRYIRVSF--SIPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred HHHHHHHCCEEEcCCcccCcCCCCceEEEEe--CCCHHHHHHHHHHHHHHHHHhh
Confidence 888899999999873 1 4677775 4578999999999999988764
No 133
>COG0857 Pta BioD-like N-terminal domain of phosphotransacetylase [General function prediction only]
Probab=99.50 E-value=1.6e-13 Score=151.08 Aligned_cols=198 Identities=20% Similarity=0.190 Sum_probs=128.2
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceec--cCCCCCCchHHHHHhccCCccccCCCcccccc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQ--TGYPHDSDSRFLFTKLPSLSLRRNFPSSLILS 113 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~--~g~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 113 (818)
||++|||.+|++++|||.|++||.++|. ++|.+|+|||||. +|...+.....+.+...
T Consensus 1 m~~~l~l~p~~~~~G~tsi~lgLl~~l~-----~k~~kva~~kPI~~~~~~~~~~~~e~~~~~~~--------------- 60 (354)
T COG0857 1 MSRTLLLIPTETGVGKTSISLGLLRALE-----QKGLKVAYFKPIGTRTGKDADDLTEEDIRATS--------------- 60 (354)
T ss_pred CcceEEEeccCCCccHHHHHHHHHHHHH-----HcCceeEEEeccccccCCccchhHHHHHHHhh---------------
Confidence 6899999999999999999999999994 8999999999997 45433333332222210
Q ss_pred cchhhhhHHHHhhhccCCCCCCCCcccccccccccccccccccCCCCCcccccccccceecccccChHHHHhhh-c-CCC
Q 003466 114 NSILFSSLFAAKSFLSSRDLPFQPQKFNSEMYDLNFREENRISGEEDSSVSELVCKTLFAWEEAVSPHLAAERE-S-GGV 191 (818)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~-~-~~~ 191 (818)
-++.+.+ +..+.. +.... + ..+
T Consensus 61 -----------------~~l~~~~---------------------------------~~~~~~------ae~L~~~~~~d 84 (354)
T COG0857 61 -----------------SSLTYAE---------------------------------PLVLSF------AEVLLSTGQDD 84 (354)
T ss_pred -----------------hhcccCc---------------------------------ccchhh------HHHHhccccch
Confidence 0011100 111111 11111 0 113
Q ss_pred CChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHH--
Q 003466 192 VGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTIS-- 269 (818)
Q Consensus 192 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~-- 269 (818)
..+++|.+.+.++.+. +|++++||-==..........|++||+.|+++++||++..+-+..+...
T Consensus 85 ~l~e~i~~~y~e~~~~-------------~~~vv~~g~~~~~~~~~~~~ln~~iA~~Lna~~vlva~~~~~~~~~~~~~i 151 (354)
T COG0857 85 VLLEEILANYAELAKD-------------ADVVVVEGDVPTREGPYALDLNYEIAKNLNAAAVLVARALLVTPYELKSRV 151 (354)
T ss_pred HHHHHHHHHHHHHhcc-------------CceEEeccceeccccCccccccHHHHhhcCcchhhccccccCChhhhhhHH
Confidence 3456777777666543 8999999932111112245799999999999999999988766554444
Q ss_pred --HHHHHHhCCCcEEEEEEccCC----CCCHHHHHHhhcC-CCCEEe-cCCCCCCCcchhh
Q 003466 270 --AYESLKLRGYDVVAVVFEDHG----LVNEVPLMSYLRN-RVPVLV-LPPLPQDSSNDLM 322 (818)
Q Consensus 270 --~~~~l~~~~~~v~gvi~N~~~----~~~~~~l~~~~~~-~~pvlg-iP~~~~~~~~~~~ 322 (818)
....+...+.++.|||+|+.. ....+.+++.+++ +..+++ +|..+-+.+..+.
T Consensus 152 ~~~~~~~~~~~~~l~gVv~N~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ll~~~~v~ 212 (354)
T COG0857 152 ELALAAFGAAGNNLAGVVINNAPVDEAGRTEDLLAEFLESSGIAVVGVLPPNRLLRSSPVR 212 (354)
T ss_pred HHHHHHhcccCCceEEEEecCCChhhhhhhhhHHHHHhhhccccccccCCHHHHhcCCcHH
Confidence 444444445589999999762 2234556666655 889999 8987776655444
No 134
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.48 E-value=6.2e-12 Score=138.50 Aligned_cols=292 Identities=13% Similarity=0.053 Sum_probs=167.1
Q ss_pred ecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHH
Q 003466 403 DACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAF 482 (818)
Q Consensus 403 D~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~ 482 (818)
||+| .+++| . +|++.+|+.+.+.... . .+..+...++++.++++++. +.++++++|++|+..+++..+
T Consensus 1 ~~~~---~~~~~-~-~~~v~~a~~~~~~~~~--~--~~~~~~~~~l~~~~a~~~g~---~~~~~~~~gt~a~~~~~~~l~ 68 (338)
T cd06502 1 DFRS---DTVTG-P-TPEMLEAMAAANVGDD--V--YGEDPTTAKLEARAAELFGK---EAALFVPSGTAANQLALAAHT 68 (338)
T ss_pred Cccc---ccCCC-C-CHHHHHHHHhcccCCc--c--cCCCHHHHHHHHHHHHHhCC---CeEEEecCchHHHHHHHHHhc
Confidence 4555 56677 4 7999999988654321 1 12356688999999998872 578889999999999888651
Q ss_pred HHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccc---cccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 483 RKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAM---EAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 483 r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~al---s~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
..| ..|+ ....+|.....+. .+.|.+.
T Consensus 69 -----~~g----------------d~v~-~~~~~~~~~~~~~~~~~~~g~~~---------------------------- 98 (338)
T cd06502 69 -----QPG----------------GSVI-CHETAHIYTDEAGAPEFLSGVKL---------------------------- 98 (338)
T ss_pred -----CCC----------------CeEE-EecCcceeeecCCcHHHHcCceE----------------------------
Confidence 112 2444 5556665433211 1111110
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
..++... + ..| .+.+++.+.+.. ..+..+.++|+++.. .+.||+. +
T Consensus 99 ~~v~~~~-~-----------~~d------------------~~~l~~~i~~~~-~~~~~~~~~v~l~~p-~n~g~~~--~ 144 (338)
T cd06502 99 LPVPGEN-G-----------KLT------------------PEDLEAAIRPRD-DIHFPPPSLVSLENT-TEGGTVY--P 144 (338)
T ss_pred EeecCCC-C-----------cCC------------------HHHHHHHhhccC-CCcCCcceEEEEEee-cCCcccc--C
Confidence 0011000 0 011 145666664210 011235677888865 5655533 7
Q ss_pred HHHHHHHHHHHHhcCCcEEEeecccCc--ccCCccchhcccCCCCcEE--EecccccCCccccce-eecchHHHhhccCC
Q 003466 640 PLFQRILVKECQNRKIPVIFDEVFTGF--WRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAA-TLATNAVFDSFVGD 714 (818)
Q Consensus 640 ~~fl~~LreLc~~~gilLI~DEV~TGf--GRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsA-vl~~~~i~~~l~~~ 714 (818)
...+++|.++|++||+++|+||++.-+ +-.|. ....+...+|++ +++|.++. |.|+ +++++++++.+...
T Consensus 145 ~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~---~~g~~~~~~~~~~~~~~~~ 219 (338)
T cd06502 145 LDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA---PVGAVVVGNRDFIARARRR 219 (338)
T ss_pred HHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC---ccceEEECCHHHHHHHHHH
Confidence 889999999999999999999987311 11122 112222346665 78888763 3344 45688876654321
Q ss_pred h-------H-----------H-----H----------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHH
Q 003466 715 S-------K-----------L-----W----------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAA 761 (818)
Q Consensus 715 ~-------~-----------~-----~----------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~ 761 (818)
. . . + .+.+.+.++.++.. .....+-+..+.+... .....
T Consensus 220 ~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~v~~~~~-------~~~~~ 291 (338)
T cd06502 220 RKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGGL-ESEVQTNIVLLDPVEA-------NAVFV 291 (338)
T ss_pred HHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCC-cccccCCeEEEecCCc-------cHHHH
Confidence 0 0 0 0 01223334444331 0111222333333211 12333
Q ss_pred HHHHHHH---hCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHH
Q 003466 762 SLLKKLR---EDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 762 ~~~~~l~---e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
.+.+.+. ++|+++.+.+ +.+|++|++.+|++|++++++++++
T Consensus 292 ~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 292 ELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 4455554 7899998764 8999999999999999999998864
No 135
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.40 E-value=6.8e-11 Score=132.89 Aligned_cols=298 Identities=13% Similarity=0.043 Sum_probs=171.6
Q ss_pred eeecccccccccCCCCCCHHHHHHHHHhhhhc-ccccCCCC----CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHH
Q 003466 401 QFDACASWWTQGPDATLQIELARDMGYTAARF-GHVMFPEN----VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIE 475 (818)
Q Consensus 401 ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~~~~----~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e 475 (818)
|||..+ .|-- ++.|.+|+.+.++.. +....... ..+...++.++++++++.. .+.++|+++|++|+.
T Consensus 2 yld~aa------~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~i~~t~~~t~a~~ 73 (379)
T TIGR03402 2 YLDNNA------TTRV-DPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAE-PDEIIFTSGGTESDN 73 (379)
T ss_pred cCCCcC------CCCC-CHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCcHHHHHH
Confidence 666554 4445 899999999887643 21110000 1234556778888888754 367999999999999
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.|++.+. ... +++..||.....|++.. .....-.. .|..
T Consensus 74 ~al~~~~-~~~-----------------~~~~~vv~~~~~~~s~~-~~~~~~~~--------------~G~~-------- 112 (379)
T TIGR03402 74 TAIKSAL-AAQ-----------------PEKRHIITTAVEHPAVL-SLCQHLEK--------------QGYK-------- 112 (379)
T ss_pred HHHHHHH-Hhc-----------------CCCCeEEEcccccHHHH-HHHHHHHH--------------cCCE--------
Confidence 9999762 111 11235665555555321 11111000 0000
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
...++.+... ..| .+.+++.+. +++..|++.-+ ++..|.
T Consensus 113 ---v~~v~~~~~g-----------~~~------------------~~~l~~~i~--------~~~~lv~i~~~-~n~tG~ 151 (379)
T TIGR03402 113 ---VTYLPVDEEG-----------RLD------------------LEELRAAIT--------DDTALVSVMWA-NNETGT 151 (379)
T ss_pred ---EEEEccCCCC-----------cCC------------------HHHHHHhcC--------CCcEEEEEEcc-cCCeee
Confidence 0011111000 001 145666553 24567777776 788898
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHHHh--hc
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFD--SF 711 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~--~l 711 (818)
+.+ +++|.++|++||+++|+|++|+ +|.. -.+.....+|++++| | +.|. ..+|++..+++..- .+
T Consensus 152 ~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~~~~s~~K-~~gp-~G~g~l~v~~~~~~~p~~ 220 (379)
T TIGR03402 152 IFP----IEEIGEIAKERGALFHTDAVQA-VGKI----PIDLKEMNIDMLSLSGHK-LHGP-KGVGALYIRKGTRFRPLL 220 (379)
T ss_pred ccc----HHHHHHHHHHcCCEEEEECccc-cccc----ccCcccCCCCEEEEcHHH-cCCC-CceEEEEECCCCCCCCcc
Confidence 886 7899999999999999999994 4422 112223457999999 9 6543 34666666654310 01
Q ss_pred ---------cCChH-------------HH--------------HHHHHHHHHc-CCCeeEEEe----e-eeEEEEEEecC
Q 003466 712 ---------VGDSK-------------LW--------------DLELIQQISS-HRTVQRVVA----L-GTLCAIELQAA 749 (818)
Q Consensus 712 ---------~~~~~-------------~~--------------~~~l~~~l~~-~~~v~~vrg----~-Gl~~~iel~~~ 749 (818)
..+.. ++ .+.+.+.++. .+.+. +-+ . ..++.+.+...
T Consensus 221 ~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 299 (379)
T TIGR03402 221 RGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDAR-LNGDPTKRLPNTVNISFEYI 299 (379)
T ss_pred cCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEE-EeCCCccCCCCEEEEEecCC
Confidence 10000 00 0122233332 44321 111 1 11233333211
Q ss_pred cccCCCchHHHHHHHHHHHhCCceEeec------------------------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 750 GCNAGYGSLYAASLLKKLREDGVYMRPL------------------------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 750 ~~~~~~~~~~a~~~~~~l~e~Gvlv~p~------------------------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
.+..+...|.++||.++++ .+.+|+++....|++|||++++.|++++
T Consensus 300 ---------~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~ 370 (379)
T TIGR03402 300 ---------EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPII 370 (379)
T ss_pred ---------CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 1346777888999999752 2579999999999999999999999988
Q ss_pred HHHH
Q 003466 806 EEFD 809 (818)
Q Consensus 806 ~~l~ 809 (818)
+++.
T Consensus 371 ~~~~ 374 (379)
T TIGR03402 371 ARLR 374 (379)
T ss_pred HHHH
Confidence 7755
No 136
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.37 E-value=1.3e-10 Score=130.58 Aligned_cols=306 Identities=14% Similarity=0.090 Sum_probs=176.9
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIA 477 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~A 477 (818)
..|++..|... ++ . .+.+.+++++.+.... .+....+..+....+++.+.+..+.. ..+.++++++|++|+..+
T Consensus 25 ~~i~l~~g~~~--~~-~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~ 100 (382)
T PRK06108 25 GVLPLWFGESD--LP-T-PDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLA 100 (382)
T ss_pred CeEEecCCCCC--CC-C-CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHH
Confidence 34555553321 22 2 5789999988776522 12222345567778888887654411 125899999999999988
Q ss_pred HHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccC
Q 003466 478 LKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYN 557 (818)
Q Consensus 478 LklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 557 (818)
++... ..| ..|++.+.+|.+.. ..+...|..
T Consensus 101 ~~~l~-----~~g----------------d~vl~~~p~y~~~~-~~~~~~g~~--------------------------- 131 (382)
T PRK06108 101 AQALV-----GPG----------------DEVVAVTPLWPNLV-AAPKILGAR--------------------------- 131 (382)
T ss_pred HHHhc-----CCC----------------CEEEEeCCCccchH-HHHHHCCCE---------------------------
Confidence 88651 112 35777777665432 111111111
Q ss_pred cceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCccc
Q 003466 558 SKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHM 637 (818)
Q Consensus 558 ~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~ 637 (818)
.+.+|... .+ ..|. -+ .+.+++.+. .++.+|++... ++..|.+.
T Consensus 132 ---~~~v~~~~------------~~--~~~~--~d--------~~~l~~~~~--------~~~~~i~l~~p-~NPtG~~~ 175 (382)
T PRK06108 132 ---VVCVPLDF------------GG--GGWT--LD--------LDRLLAAIT--------PRTRALFINSP-NNPTGWTA 175 (382)
T ss_pred ---EEEeeCCC------------CC--CCcc--CC--------HHHHHHhcC--------ccceEEEEECC-CCCCCccc
Confidence 01111000 00 0000 00 144555543 24556666553 77778775
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEeecccCcccC-Cccc-h-hcccCCCCc---EEEeccccc-CCccccceeecchHHHhh
Q 003466 638 VDPLFQRILVKECQNRKIPVIFDEVFTGFWRL-GVET-T-ADLLGCVPD---IACYGKLLT-GGVIPLAATLATNAVFDS 710 (818)
Q Consensus 638 ~p~~fl~~LreLc~~~gilLI~DEV~TGfGRt-G~~~-a-~e~~gv~PD---ivtlgKgLg-gGy~PlsAvl~~~~i~~~ 710 (818)
+.+.+++|.++|++||+++|+||++.+|... +... . ....+..+. +.+|||.+| .| +.+|.+++++++++.
T Consensus 176 -~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~~~~~~~~~~~ 253 (382)
T PRK06108 176 -SRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTG-WRLGWLVAPPALGQV 253 (382)
T ss_pred -CHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcc-cceeeeeCCHHHHHH
Confidence 8999999999999999999999999877332 1111 1 111111122 237999987 57 799999999888765
Q ss_pred ccCC--------hH--------HH-----------------HHHHHHHHHcCCCeeEEEeeee-EEEEEEecCcccCCCc
Q 003466 711 FVGD--------SK--------LW-----------------DLELIQQISSHRTVQRVVALGT-LCAIELQAAGCNAGYG 756 (818)
Q Consensus 711 l~~~--------~~--------~~-----------------~~~l~~~l~~~~~v~~vrg~Gl-~~~iel~~~~~~~~~~ 756 (818)
+... .. .+ .+.+.+.++.++.+..+...|. ++-+.+...
T Consensus 254 ~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~------- 326 (382)
T PRK06108 254 LEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGV------- 326 (382)
T ss_pred HHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCC-------
Confidence 4311 00 00 0112334444444333333433 334445322
Q ss_pred hHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 757 SLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 757 ~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
..+..+++.|+ ++||++.|+ .+.+|++... +++++++++++|.++++
T Consensus 327 -~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 327 -TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred -CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 12456788776 579999872 2679998886 89999999999988764
No 137
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.35 E-value=8.8e-11 Score=131.36 Aligned_cols=292 Identities=13% Similarity=0.156 Sum_probs=172.4
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
++||+.++. +.+| . +|.+.+++.+.++.+..+. .....+|.+.++++++-. .+.++++++++++...++.
T Consensus 33 ~~i~l~~~~--~~~~-~-~~~~~~a~~~~~~~~~~y~-----~~~~~~lr~~ia~~~~~~-~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 33 DIIKLASNE--NPLG-P-SPKAIEAIRAAADELHRYP-----DGSGFELKAALAEKFGVD-PERIILGNGSDEILELLAR 102 (367)
T ss_pred ceEEecCCC--CCCC-C-CHHHHHHHHHHHHhhcCCC-----CCcHHHHHHHHHHHhCcC-HHHEEEcCCHHHHHHHHHH
Confidence 899998742 3566 3 6889999998876543221 112346777777776532 2578888777777666555
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
.. . +.| ..|+..+.+|.+.... ....|..
T Consensus 103 ~l----~-~~g----------------d~vl~~~p~y~~~~~~-~~~~g~~----------------------------- 131 (367)
T PRK02731 103 AY----L-GPG----------------DEVIYSEHGFAVYPIA-AQAVGAK----------------------------- 131 (367)
T ss_pred Hh----c-CCC----------------CEEEEecCCHHHHHHH-HHHcCCe-----------------------------
Confidence 43 1 112 3577777777543221 1111111
Q ss_pred eeecCcc-hhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccC
Q 003466 560 WILSLPE-WLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMV 638 (818)
Q Consensus 560 ~~v~~P~-~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~ 638 (818)
.+.+|. .+ ..| .+.+++.+. ++..+|++... ++..|.+.+
T Consensus 132 -~~~~~~~~~-----------~~~------------------~~~l~~~~~--------~~~~~v~l~~p-~nptG~~~~ 172 (367)
T PRK02731 132 -PVEVPAKDY-----------GHD------------------LDAMLAAVT--------PRTRLVFIANP-NNPTGTYLP 172 (367)
T ss_pred -EEEecccCC-----------CCC------------------HHHHHHHhC--------CCCcEEEEeCC-CCCCCcCCC
Confidence 011110 00 001 144555553 23455665554 788888774
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccCCc-cchhcccCCCCcEE---Eeccccc-CCccccceeecchHHHhhccC
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-ETTADLLGCVPDIA---CYGKLLT-GGVIPLAATLATNAVFDSFVG 713 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~~a~e~~gv~PDiv---tlgKgLg-gGy~PlsAvl~~~~i~~~l~~ 713 (818)
.+-+.++.+.|+ +|+++|+||++..+...+. ..+...++..++++ ++||.+| .| +.+|.+++++++++.+..
T Consensus 173 -~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~l~~~~~~~~~l~~ 249 (367)
T PRK02731 173 -AEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAG-LRVGYGIAPPEIIDALNR 249 (367)
T ss_pred -HHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcc-cceeeeeCCHHHHHHHHH
Confidence 444444444443 4999999999987644332 22233333345555 8999987 67 699999999988876642
Q ss_pred Ch------H--------------HH----------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHH
Q 003466 714 DS------K--------------LW----------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASL 763 (818)
Q Consensus 714 ~~------~--------------~~----------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~ 763 (818)
.. . .+ .+.+.+.+++++. ......|.++.+.+... ..+..+
T Consensus 250 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~g~~~~i~~~~~--------~~~~~~ 320 (367)
T PRK02731 250 VRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELGL-EYIPSVGNFILVDFDDG--------KDAAEA 320 (367)
T ss_pred ccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCceEEEEECCCC--------CCHHHH
Confidence 11 0 00 0123344454432 22234577777776322 125678
Q ss_pred HHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 764 LKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 764 ~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
++.|.++||++++. .+.+|++.. +.+++++++++|+++++
T Consensus 321 ~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 321 YQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 89999999999984 257888864 68899999999988764
No 138
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.34 E-value=7e-11 Score=131.39 Aligned_cols=280 Identities=16% Similarity=0.064 Sum_probs=162.8
Q ss_pred CHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccC
Q 003466 418 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLG 497 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~ 497 (818)
++++.+|+.+.+.... .....+...++.+.|+++++.+..+.+++++||++|+..++.... ..|
T Consensus 11 ~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~-----~~g------- 74 (356)
T cd06451 11 PPRVLKAMNRPMLGHR----SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL-----EPG------- 74 (356)
T ss_pred CHHHHHHhCCCccCCC----CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC-----CCC-------
Confidence 6777777764432111 011235577888999998875322357899999999988887541 122
Q ss_pred CCccccccceEEEEEcCCCCCCccc-cccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccc
Q 003466 498 KDTTEKCIELKVLALKGSYHGDTLG-AMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHK 576 (818)
Q Consensus 498 ~~~~~~~~r~~II~~~~sYHG~t~~-als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~ 576 (818)
..|++...+|++.... .....|.+. ..++....+
T Consensus 75 ---------~~vl~~~~~~~~~~~~~~~~~~g~~~----------------------------~~v~~~~~~-------- 109 (356)
T cd06451 75 ---------DKVLVGVNGVFGDRWADMAERYGADV----------------------------DVVEKPWGE-------- 109 (356)
T ss_pred ---------CEEEEecCCchhHHHHHHHHHhCCCe----------------------------EEeecCCCC--------
Confidence 3577776655553211 111111110 001100000
Q ss_pred cccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCc
Q 003466 577 DITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIP 656 (818)
Q Consensus 577 ~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gil 656 (818)
..| .+.+++.+. +.++++|++-.. +...|.+.+ +++|.++|+++|++
T Consensus 110 ---~~~------------------~~~l~~~i~-------~~~~~~v~i~~~-~~~~G~~~~----~~~i~~~a~~~~~~ 156 (356)
T cd06451 110 ---AVS------------------PEEIAEALE-------QHDIKAVTLTHN-ETSTGVLNP----LEGIGALAKKHDAL 156 (356)
T ss_pred ---CCC------------------HHHHHHHHh-------ccCCCEEEEecc-CCCcccccC----HHHHHHHHHhcCCE
Confidence 111 255666664 124556666554 667888775 88999999999999
Q ss_pred EEEeecccCcccCCccchhcccCCCCcEEEe--cccccCCccccceeecchHHHhhccC---------------------
Q 003466 657 VIFDEVFTGFWRLGVETTADLLGCVPDIACY--GKLLTGGVIPLAATLATNAVFDSFVG--------------------- 713 (818)
Q Consensus 657 LI~DEV~TGfGRtG~~~a~e~~gv~PDivtl--gKgLggGy~PlsAvl~~~~i~~~l~~--------------------- 713 (818)
+|+|++| ++|.. .+....++ +|+++. .|.++++ ..+|+++.+++.++.+..
T Consensus 157 li~D~~~-~~g~~--~~~~~~~~--~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T cd06451 157 LIVDAVS-SLGGE--PFRMDEWG--VDVAYTGSQKALGAP-PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEG 230 (356)
T ss_pred EEEeeeh-hccCc--cccccccC--ccEEEecCchhccCC-CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhccc
Confidence 9999998 46532 12222233 576654 6999875 357889898887665431
Q ss_pred --C--hH-------------HHH---------------HHHHHHHHcCCC--eeEEEe-eeeEEEEEEecCcccCCCchH
Q 003466 714 --D--SK-------------LWD---------------LELIQQISSHRT--VQRVVA-LGTLCAIELQAAGCNAGYGSL 758 (818)
Q Consensus 714 --~--~~-------------~~~---------------~~l~~~l~~~~~--v~~vrg-~Gl~~~iel~~~~~~~~~~~~ 758 (818)
. .. .+. +.+.+.+...+. +....+ .+.+..+.+... .
T Consensus 231 ~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--------~ 302 (356)
T cd06451 231 YSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEG--------V 302 (356)
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCC--------C
Confidence 0 00 000 112233333321 111111 112222222211 1
Q ss_pred HHHHHHHHHHhC-CceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 759 YAASLLKKLRED-GVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 759 ~a~~~~~~l~e~-Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
....+++.|.++ ||++.+. ++.+|+++...+|++||++++++|++++
T Consensus 303 ~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 303 DGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred CHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 256789999998 9999852 4689999999999999999999998876
No 139
>PRK07682 hypothetical protein; Validated
Probab=99.34 E-value=2e-10 Score=129.09 Aligned_cols=293 Identities=14% Similarity=0.116 Sum_probs=172.4
Q ss_pred CHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCCC-C-CcEEEeCChhHHHHHHHHHHHHHhhhccccccc
Q 003466 418 QIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKGW-A-SRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVD 494 (818)
Q Consensus 418 hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~~-l-~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~ 494 (818)
.+.+.+++.++++.. ..+....+..+....+++.+.+..+... . +.++++++|++|+..+++... ..|
T Consensus 35 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~-----~~g---- 105 (378)
T PRK07682 35 PWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAII-----NPG---- 105 (378)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC-----CCC----
Confidence 567888888877642 1121123445677788888876533210 1 379999999999999887651 222
Q ss_pred ccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccc
Q 003466 495 FLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVE 574 (818)
Q Consensus 495 ~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~ 574 (818)
..|++.+.+|++.... ....|... +.+|...
T Consensus 106 ------------d~vl~~~p~y~~~~~~-~~~~g~~~------------------------------~~~~~~~------ 136 (378)
T PRK07682 106 ------------DEVLIVEPSFVSYAPL-VTLAGGVP------------------------------VPVATTL------ 136 (378)
T ss_pred ------------CEEEEeCCCchhhHHH-HHHcCCEE------------------------------EEeecCC------
Confidence 3788899998853321 11121110 0111000
Q ss_pred cccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcC
Q 003466 575 HKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRK 654 (818)
Q Consensus 575 ~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~g 654 (818)
.+ .|. .+ .+.+++.+. +++.++++... ++..|.+. +.+.+++|.++|++||
T Consensus 137 ------~~---~~~--~d--------~~~l~~~~~--------~~~~~v~~~~p-~NPtG~~~-s~~~~~~l~~~~~~~~ 187 (378)
T PRK07682 137 ------EN---EFK--VQ--------PAQIEAAIT--------AKTKAILLCSP-NNPTGAVL-NKSELEEIAVIVEKHD 187 (378)
T ss_pred ------cc---CCC--CC--------HHHHHhhcC--------cccEEEEEECC-CCCcCcCc-CHHHHHHHHHHHHHcC
Confidence 00 000 00 245555553 24556655443 67778755 7899999999999999
Q ss_pred CcEEEeecccCcccCCccch-hcccCCCCc---EEEeccccc-CCccccceeecchHHHhhccCCh--------H-----
Q 003466 655 IPVIFDEVFTGFWRLGVETT-ADLLGCVPD---IACYGKLLT-GGVIPLAATLATNAVFDSFVGDS--------K----- 716 (818)
Q Consensus 655 ilLI~DEV~TGfGRtG~~~a-~e~~gv~PD---ivtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~--------~----- 716 (818)
+++|+||++..|...+.... ....+..+. +.+|||.++ .| +.+|.+++++++++.+.... .
T Consensus 188 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a 266 (378)
T PRK07682 188 LIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTG-WRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFA 266 (378)
T ss_pred cEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChh-hhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHH
Confidence 99999999988755443221 121222222 448999998 67 78999999998887653211 0
Q ss_pred ---HHH-----------------HHHHHHHHcCCCeeEEEeeeeEEE-EEEecCcccCCCchHHHHHHHHHHH-hCCceE
Q 003466 717 ---LWD-----------------LELIQQISSHRTVQRVVALGTLCA-IELQAAGCNAGYGSLYAASLLKKLR-EDGVYM 774 (818)
Q Consensus 717 ---~~~-----------------~~l~~~l~~~~~v~~vrg~Gl~~~-iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv 774 (818)
.++ +.+.+.|++++. .-....|.++. +.+.... ..+..+++.|+ ++||++
T Consensus 267 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~g~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v 338 (378)
T PRK07682 267 ALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGL-TCHVPGGAFYAFPSISSTG-------LSSEEFAEQLLLEEKVAV 338 (378)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCeeEEEEEeccCCC-------CCHHHHHHHHHHhCCEEE
Confidence 110 012233444432 21223343333 3332211 12456787776 789999
Q ss_pred eec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 775 RPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 775 ~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.|+ .+.+|++.. .+++++++.+++|.++++++
T Consensus 339 ~pg~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 339 VPGSVFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred cCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhhc
Confidence 873 267888765 46899999999999887653
No 140
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.34 E-value=8.1e-11 Score=130.47 Aligned_cols=284 Identities=13% Similarity=0.129 Sum_probs=166.6
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
+.||+++|.. .++ . +|++++|++++++....+. .+...++.+.++++++-. .+.+++++++++++..+++
T Consensus 20 ~~i~l~~~~~--~~~-~-~~~~~~a~~~~~~~~~~y~-----~~~~~~lr~~ia~~~~~~-~~~i~~~~G~~~~l~~~~~ 89 (346)
T TIGR01141 20 EVIKLNSNEN--PFG-P-PPKAKEALRAEADKLHRYP-----DPDPAELKQALADYYGVD-PEQILLGNGSDEIIELLIR 89 (346)
T ss_pred ceEEccCCCC--CCC-C-CHHHHHHHHHhHHHhhcCC-----CCCHHHHHHHHHHHhCcC-hHHEEEcCCHHHHHHHHHH
Confidence 7899987432 344 2 7999999999875432221 122356777777776532 3579999999999988877
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
... +.| .+|+..+.+|.... ......|..
T Consensus 90 ~l~-----~~g----------------d~v~~~~p~y~~~~-~~~~~~g~~----------------------------- 118 (346)
T TIGR01141 90 AFL-----EPG----------------DAVLVPPPTYSMYE-ISAKIHGAE----------------------------- 118 (346)
T ss_pred Hhc-----CCC----------------CEEEEcCCCHHHHH-HHHHHcCCe-----------------------------
Confidence 651 122 36777776663211 111111110
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
.+.+|... + -..| .+.+++.+. .++++|++... ++..|...+
T Consensus 119 -~~~~~~~~--------~-~~~d------------------~~~l~~~~~--------~~~~~v~l~~p-~NptG~~~~- 160 (346)
T TIGR01141 119 -VVKVPLDE--------D-GQLD------------------LEDILVAID--------DKPKLVFLCSP-NNPTGNLLS- 160 (346)
T ss_pred -EEEeccCC--------C-CCCC------------------HHHHHHhcC--------CCCCEEEEeCC-CCCCCCCCC-
Confidence 00111000 0 0011 134444332 34566776654 777888885
Q ss_pred HHHHHHHHHHHHhc--CCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCccccceeecchHHHhhccC
Q 003466 640 PLFQRILVKECQNR--KIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVIPLAATLATNAVFDSFVG 713 (818)
Q Consensus 640 ~~fl~~LreLc~~~--gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~PlsAvl~~~~i~~~l~~ 713 (818)
.++++++|+.+ |+++|+||++..|...+... ......++++ +++|.+| .| +.+|.+++++++.+.+..
T Consensus 161 ---~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~g~~G-~r~G~~~~~~~~~~~~~~ 234 (346)
T TIGR01141 161 ---RSDIEAVLERTPEDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLSKAFGLAG-LRIGYAIANAEIIDALNK 234 (346)
T ss_pred ---HHHHHHHHHhCCCCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhhHhhhchh-hhceeeecCHHHHHHHHh
Confidence 44555555544 99999999998775332221 1112234543 7899995 46 689999999998876642
Q ss_pred Ch------H--------H------H----------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHH
Q 003466 714 DS------K--------L------W----------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASL 763 (818)
Q Consensus 714 ~~------~--------~------~----------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~ 763 (818)
.. . . + .+.+.+.++.++.+.-+...|.++.+++.. .+.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~----------~~~~~ 304 (346)
T TIGR01141 235 VRAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVYPSDANFVLIRFPR----------DADAL 304 (346)
T ss_pred ccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCCEEEEecCC----------CHHHH
Confidence 11 0 0 0 112334455554433223356666666542 14578
Q ss_pred HHHHHhCCceEeec------CCEEEEECCCCChHHHHHHHHHHH
Q 003466 764 LKKLREDGVYMRPL------GNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 764 ~~~l~e~Gvlv~p~------g~~ir~~ppl~~t~edId~~~~~l 801 (818)
++.|.++||++.+. .+.+|+... +++|+++++++|
T Consensus 305 ~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 305 FEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred HHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHh
Confidence 88999999999984 367888854 789999999876
No 141
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.32 E-value=2.5e-10 Score=126.41 Aligned_cols=283 Identities=14% Similarity=0.105 Sum_probs=164.8
Q ss_pred CHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCC-CcEEEeCChhHHHHHHHHHHHHHhhhccccccccc
Q 003466 418 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWA-SRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFL 496 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l-~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~ 496 (818)
.|.|.+|+... +.+.. ....+...++.++|+++++.+.- ..++++.+|++|++.++....
T Consensus 11 ~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-------------- 71 (355)
T TIGR03301 11 SATVRDAMLVD---WCHWD--SEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-------------- 71 (355)
T ss_pred CHHHHHHhhhh---ccCCC--HHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------------
Confidence 56666666652 22211 11236677888999998874321 257789999999999998761
Q ss_pred CCCccccccceEEEEEcCCCCCCccccc-cccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcccc
Q 003466 497 GKDTTEKCIELKVLALKGSYHGDTLGAM-EAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEH 575 (818)
Q Consensus 497 ~~~~~~~~~r~~II~~~~sYHG~t~~al-s~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~ 575 (818)
..+.++|....+++|.....+ ...|.+. ..++.++.+
T Consensus 72 -------~~~~~vi~~~~~~~~~~~~~~a~~~g~~~----------------------------~~i~~~~~~------- 109 (355)
T TIGR03301 72 -------PRDGKLLVLINGAYGERLAKICEYLGIPH----------------------------TDLNFSEYE------- 109 (355)
T ss_pred -------CCCCeEEEECCCchhhHHHHHHHHcCCce----------------------------EEEecCCCC-------
Confidence 112467777777777532111 1111110 011111000
Q ss_pred ccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEE-EccccccCCCcccCCHHHHHHHHHHHHhcC
Q 003466 576 KDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALI-IEPVVHAAGGMHMVDPLFQRILVKECQNRK 654 (818)
Q Consensus 576 ~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVI-vEPV~~g~gG~~~~p~~fl~~LreLc~~~g 654 (818)
..| .+.+++.+.+ + .++..|+ +-+ ....|...+ +++|.++|++||
T Consensus 110 ----~~d------------------~~~l~~~l~~-----~-~~~~~v~~~~~--~~~~G~~~~----~~~i~~l~~~~~ 155 (355)
T TIGR03301 110 ----PPD------------------LNRIEEALAA-----D-PDITHVATVHH--ETTTGILNP----LEAIAKVARSHG 155 (355)
T ss_pred ----CCC------------------HHHHHHHHHh-----C-CCceEEEEEec--CCcccchhH----HHHHHHHHHHcC
Confidence 011 2566677652 2 2333333 322 445677765 899999999999
Q ss_pred CcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCC--------------------
Q 003466 655 IPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGD-------------------- 714 (818)
Q Consensus 655 ilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~-------------------- 714 (818)
+++|+|++++ ||.. .+....+++..-+.+++|.++|+ .-+|.+++++++++.+...
T Consensus 156 ~~livD~~~s-~g~~--~~~~~~~~~d~~~~s~~K~l~~~-~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (355)
T TIGR03301 156 AVLIVDAMSS-FGAI--PIDIEELDVDALIASANKCLEGV-PGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGK 231 (355)
T ss_pred CEEEEEeccc-cCCc--ccchhhcCccEEEecCCcccccC-CceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCC
Confidence 9999999984 6532 23333344433345899998764 1258888999887665410
Q ss_pred -----hH------------H-----HH----------HHHHHHHHcCCC-e-e-EEEeeeeEEEEEEecCcccCCCchHH
Q 003466 715 -----SK------------L-----WD----------LELIQQISSHRT-V-Q-RVVALGTLCAIELQAAGCNAGYGSLY 759 (818)
Q Consensus 715 -----~~------------~-----~~----------~~l~~~l~~~~~-v-~-~vrg~Gl~~~iel~~~~~~~~~~~~~ 759 (818)
.. + +. +.+.+.+++++. + . .....|.++.+.+.... ...
T Consensus 232 ~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~ 305 (355)
T TIGR03301 232 WRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDP------DFD 305 (355)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCC------cch
Confidence 00 0 00 011223333332 1 1 11233455555553210 012
Q ss_pred HHHHHHHHHhCCceEeecC----CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPLG----NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~g----~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+..+.+.|.++||++.+.+ +.+|+.+...++++|++++++.|++++
T Consensus 306 ~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 306 FDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred HHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 4578899999999998753 689999988899999999999998753
No 142
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.30 E-value=7.1e-10 Score=124.16 Aligned_cols=284 Identities=9% Similarity=0.044 Sum_probs=169.3
Q ss_pred cCCCCCCHHHHHHHHHhhhhcccccCCCC------CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHh
Q 003466 412 GPDATLQIELARDMGYTAARFGHVMFPEN------VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKF 485 (818)
Q Consensus 412 ~lGh~~hp~V~eAi~~q~~~~~~~~~~~~------~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~ 485 (818)
..|-- .+.+.+|+.+.++.+......+. ......++.+.|+++++....+.++++++|++|+..+++.+.. -
T Consensus 7 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~-~ 84 (373)
T cd06453 7 ATSQK-PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGR-A 84 (373)
T ss_pred cccCC-CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhh-c
Confidence 35655 78899999887755422110001 1234556778888888743124799999999999999987621 0
Q ss_pred hhcccccccccCCCccccccceEEEEEcCCCCCCcccccc----ccCCCCCCCcCCCCcccCCCcccCCCcccccCccee
Q 003466 486 SFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAME----AQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWI 561 (818)
Q Consensus 486 t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als----~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~ 561 (818)
... ..+||+.+.+|-+ ...... ..|.. ...
T Consensus 85 -~~~----------------g~~vl~~~~~~~~-~~~~~~~~~~~~g~~----------------------------~~~ 118 (373)
T cd06453 85 -NKP----------------GDEIVTSVMEHHS-NIVPWQQLAERTGAK----------------------------LKV 118 (373)
T ss_pred -CCC----------------CCEEEECcchhHH-HHHHHHHHHhhcCcE----------------------------EEE
Confidence 001 2356665544433 211110 11110 001
Q ss_pred ecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHH
Q 003466 562 LSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPL 641 (818)
Q Consensus 562 v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~ 641 (818)
++..... .-| .+.+++.+. +++.+|++.-+ ....|...+
T Consensus 119 v~~~~~~-----------~~d------------------~~~l~~~l~--------~~~~~v~~~~~-~~~tG~~~~--- 157 (373)
T cd06453 119 VPVDDDG-----------QLD------------------LEALEKLLT--------ERTKLVAVTHV-SNVLGTINP--- 157 (373)
T ss_pred eecCCCC-----------CcC------------------HHHHHHHhc--------CCceEEEEeCc-ccccCCcCC---
Confidence 1100000 001 255666664 25667777665 667788776
Q ss_pred HHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHHHhhccCC-----
Q 003466 642 FQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSFVGD----- 714 (818)
Q Consensus 642 fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l~~~----- 714 (818)
+++|.++|++||+++|+|++++ +|... +... ...+|+++++ |.+++ ..+|.+++++++++.+...
T Consensus 158 -~~~i~~~~~~~~~~li~D~a~~-~~~~~--~~~~--~~~~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~ 229 (373)
T cd06453 158 -VKEIGEIAHEAGVPVLVDGAQS-AGHMP--VDVQ--DLGCDFLAFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGGGE 229 (373)
T ss_pred -HHHHHHHHHHcCCEEEEEhhhh-cCcee--eecc--ccCCCEEEeccccccCC--CCcEEEEEchHHhhcCCCeecCCC
Confidence 7999999999999999999985 43321 1111 2357999988 99886 3478888888887654320
Q ss_pred ----------------------hH-------------HHH---------------HHHHHHHHcCCCeeEE---EeeeeE
Q 003466 715 ----------------------SK-------------LWD---------------LELIQQISSHRTVQRV---VALGTL 741 (818)
Q Consensus 715 ----------------------~~-------------~~~---------------~~l~~~l~~~~~v~~v---rg~Gl~ 741 (818)
.. .+. +.+.+.+++++.+.-+ ...+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 309 (373)
T cd06453 230 MIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGV 309 (373)
T ss_pred ccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCe
Confidence 00 000 1122344555543322 234556
Q ss_pred EEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------------CCEEEEECCCCChHHHHHHHHHHH
Q 003466 742 CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------------GNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 742 ~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------------g~~ir~~ppl~~t~edId~~~~~l 801 (818)
+.+.+... .+.++.+.|.++||.+.+. ++.+|+++...+|++|+|+++++|
T Consensus 310 ~~~~~~~~---------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 310 VSFNLEGI---------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EEEEECCc---------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 66665321 2457888999999998642 368999999999999999999864
No 143
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.30 E-value=3.2e-10 Score=126.23 Aligned_cols=182 Identities=19% Similarity=0.216 Sum_probs=119.3
Q ss_pred HHHHHHHhcCCCCCCCC-cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc-c-h-hcc
Q 003466 602 SYISQNLLQNPGLKVSG-CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-T-T-ADL 677 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~-~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-~-a-~e~ 677 (818)
+.|++.+++. .... ++.+|++... ++..|... +.+.+++|.++|++||+++|+||++..+ ..+.. + . ...
T Consensus 133 ~~l~~~l~~~---~~~~~~~~~v~~~~p-~nPtG~~~-~~~~l~~l~~~~~~~~~~ii~De~y~~~-~~~~~~~~~~~~~ 206 (363)
T PF00155_consen 133 EALEEALDEL---PSKGPRPKAVLICNP-NNPTGSVL-SLEELRELAELAREYNIIIIVDEAYSDL-IFGDPDFGPIRSL 206 (363)
T ss_dssp HHHHHHHHTS---HTTTETEEEEEEESS-BTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTG-BSSSSHTHHHHGH
T ss_pred cccccccccc---cccccccceeeeccc-cccccccc-ccccccchhhhhcccccceeeeeceecc-ccCCCccCccccc
Confidence 5677777642 1122 4567777765 77788766 8899999999999999999999999766 44432 1 1 222
Q ss_pred cCCCCc-EE--Eeccccc-CCccccceeecchHHHhhccCChH--------------------H---HH-----------
Q 003466 678 LGCVPD-IA--CYGKLLT-GGVIPLAATLATNAVFDSFVGDSK--------------------L---WD----------- 719 (818)
Q Consensus 678 ~gv~PD-iv--tlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~~--------------------~---~~----------- 719 (818)
..-.++ ++ ++||++| -| +.+|++++++++++.+..... . +.
T Consensus 207 ~~~~~~vi~~~S~SK~~g~~G-lRvG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~ 285 (363)
T PF00155_consen 207 LDEDDNVIVVGSLSKSFGLPG-LRVGYIVAPPELIERLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENR 285 (363)
T ss_dssp HTTTSTEEEEEESTTTTTSGG-GTEEEEEEEHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccceeeeeccccccccc-cccccccchhhhhhhhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHH
Confidence 233344 33 7999997 57 688999999988876643211 0 10
Q ss_pred HHHHHHHHcCCCeeEEEe-eeeEEEEEEecCcccCCCchHHHHHHHHHHHhC-CceEeec-----CCEEEEECCCCChHH
Q 003466 720 LELIQQISSHRTVQRVVA-LGTLCAIELQAAGCNAGYGSLYAASLLKKLRED-GVYMRPL-----GNVIYLMCGPCSSPE 792 (818)
Q Consensus 720 ~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~-Gvlv~p~-----g~~ir~~ppl~~t~e 792 (818)
+.+.+.+++.+ +.-... .|.++-+.+.. ..+..+++.|+++ ||++.|. .+.+|++. ..++++
T Consensus 286 ~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e 354 (363)
T PF00155_consen 286 DLLREALEEIG-ITVLPPEAGFFLWVRLDP---------NDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEE 354 (363)
T ss_dssp HHHHHHHHHTT-SEEEHHSBSSEEEEEESH---------HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHH
T ss_pred HHHHHHHHHhh-hheeeccCccEEEEEccc---------chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHH
Confidence 11233344442 222222 34444444432 1467789999998 9999983 36899999 789999
Q ss_pred HHHHHHHHH
Q 003466 793 VCSQLLLKL 801 (818)
Q Consensus 793 dId~~~~~l 801 (818)
++++++++|
T Consensus 355 ~~~~~~~~l 363 (363)
T PF00155_consen 355 DLEEALERL 363 (363)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhC
Confidence 999999876
No 144
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=6.6e-11 Score=127.77 Aligned_cols=324 Identities=14% Similarity=0.127 Sum_probs=197.6
Q ss_pred eEEEEeecCCeeEEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC----CCCCChhHHHHHHH
Q 003466 376 VTVIDSRCGENFSVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF----PENVYEPALECAEL 451 (818)
Q Consensus 376 ~~vi~~~~G~~~~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~----~~~~~~~~~eLae~ 451 (818)
+.++++.-+.+ ..+||+ .++++.| ++.+|+..++++.+.+...+.+||.+.. +-++-+.|..|+++
T Consensus 78 ~~v~e~~~~~~---~~i~G~----~~~N~aS---~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~ 147 (467)
T KOG1358|consen 78 TPVLESVMLPH---VTIDGK----DVLNFAS---ANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKR 147 (467)
T ss_pred CcccccccCCc---eEecCc----eeecccc---hhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHH
Confidence 34567777764 336899 9999999 7788877799999999999999976531 12346789999999
Q ss_pred HHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCC
Q 003466 452 LLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSP 531 (818)
Q Consensus 452 L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~ 531 (818)
|+.++|- +..+..+-|-.+++.++..- ..|.+||+.+..-|=...-++.++...
T Consensus 148 iakF~G~---E~aivYs~gF~ti~S~ipaf----------------------sKrGDIi~~de~~nfaIq~GlqlSRS~- 201 (467)
T KOG1358|consen 148 IAKFMGT---EDAIVYSYGFSTIESAIPAF----------------------SKRGDIIFVDEAVNFAIQKGLQLSRST- 201 (467)
T ss_pred HHHhhCC---cceeeeccccchhhhcchhh----------------------hccCcEEEEehhhhHHHHHHHhhhhhe-
Confidence 9999984 55555568899999998853 334578888776553222222222111
Q ss_pred CCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcC
Q 003466 532 YTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQN 611 (818)
Q Consensus 532 ~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~ 611 (818)
..+ +.|||+ +.+|+.+.+.
T Consensus 202 -------------i~~------------------------------Fkhndm------------------~~lerll~E~ 220 (467)
T KOG1358|consen 202 -------------ISY------------------------------FKHNDM------------------EDLERLLPEQ 220 (467)
T ss_pred -------------eEE------------------------------ecCCCH------------------HHHHHhccCc
Confidence 000 126776 3444444332
Q ss_pred CCC--CCCCc---EEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc--cchhcccCCCC--
Q 003466 612 PGL--KVSGC---IGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV--ETTADLLGCVP-- 682 (818)
Q Consensus 612 ~~~--~~~~~---iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~--~~a~e~~gv~P-- 682 (818)
... +++.+ ..-+++|.+ ....|.+.| +++|.++..||..-+|+||-.+ ||-.|+ .+..+|+|+.+
T Consensus 221 ~~~~~K~~k~~~~Rrfiv~EGl-~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~S-fG~lg~~GrGvteH~~v~~~~ 294 (467)
T KOG1358|consen 221 EDEDQKNPKKALTRRFIVVEGL-YANTGDICP----LPEIVKLKNKYKFRVILDESLS-FGVLGKTGRGVTEHFGVPITD 294 (467)
T ss_pred chhhhhccccccceEEEEEEee-ccCCCcccc----cHHHHHHHhhheEEEEEecccc-cccccccCccccccCCCCccc
Confidence 100 22222 468999998 677788887 9999999999999999999985 666666 56679999864
Q ss_pred -cEEEe--ccccc--CCccccceeecchHHHhh--ccCChH--------HHH-------------HHHHHHHH-----cC
Q 003466 683 -DIACY--GKLLT--GGVIPLAATLATNAVFDS--FVGDSK--------LWD-------------LELIQQIS-----SH 729 (818)
Q Consensus 683 -Divtl--gKgLg--gGy~PlsAvl~~~~i~~~--l~~~~~--------~~~-------------~~l~~~l~-----~~ 729 (818)
|+++. .-+|+ ||+ ++++.-+.+. +.+.+. ++. .+..+.+. .|
T Consensus 295 iDiv~~sm~~alas~GgF-----c~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H 369 (467)
T KOG1358|consen 295 IDIVTASMETALASGGGF-----CAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFH 369 (467)
T ss_pred eeeeeecccccccccCce-----eecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccc
Confidence 56543 33443 454 5555444432 111111 111 01111111 11
Q ss_pred CCee-----EEEee--eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee-----------cCCEEEEECCCCChH
Q 003466 730 RTVQ-----RVVAL--GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP-----------LGNVIYLMCGPCSSP 791 (818)
Q Consensus 730 ~~v~-----~vrg~--Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p-----------~g~~ir~~ppl~~t~ 791 (818)
+... .+.|. ..++-+.+........-....-..++..|+.+|+++.. -...||++....+++
T Consensus 370 ~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~se 449 (467)
T KOG1358|consen 370 AALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSE 449 (467)
T ss_pred hhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCH
Confidence 1111 11111 11222222211000000112355678888877988863 125899999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 003466 792 EVCSQLLLKLYQRLEE 807 (818)
Q Consensus 792 edId~~~~~l~~~l~~ 807 (818)
|||+++.+.+++...+
T Consensus 450 eel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 450 EELERAAELIKEVASA 465 (467)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999877543
No 145
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.29 E-value=1.5e-09 Score=123.01 Aligned_cols=299 Identities=9% Similarity=0.037 Sum_probs=175.5
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCC------CChhHHHHHHHHHhccCCCCCCcEEEeCChhHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPEN------VYEPALECAELLLQGVGKGWASRAYFSDNGSTA 473 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~------~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA 473 (818)
-|||..+ .|.- .+.+.+|+.+.+.........+. ..+...++.+.++++++....+.++|++++++|
T Consensus 18 iyld~a~------~~~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~ 90 (398)
T TIGR03392 18 VYLDSAA------TALK-PQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTES 90 (398)
T ss_pred EEeeCcc------ccCC-CHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHH
Confidence 6788654 5655 78999999887754321110000 123345677788888874223579999999999
Q ss_pred HHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccc---cccCCCCCCCcCCCCcccCCCcccCC
Q 003466 474 IEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAM---EAQAPSPYTGFLQQPWYSGRGLFLDP 550 (818)
Q Consensus 474 ~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~al---s~tg~~~~~~~~~~p~~~~~~~~~~~ 550 (818)
+..++... ....-.. ..+||+.+..|++...... ...|..
T Consensus 91 l~~~~~~~-~~~~~~~----------------gd~Vl~~~~~~~s~~~~~~~~~~~~g~~-------------------- 133 (398)
T TIGR03392 91 INLVAQSY-ARPRLQP----------------GDEIIVSEAEHHANLIPWLMVAQQTGAK-------------------- 133 (398)
T ss_pred HHHHHHHh-hhccCCC----------------CCEEEECCcchhHHHHHHHHHHHHcCcE--------------------
Confidence 99988754 1000011 1368887777776321111 111110
Q ss_pred CcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccc
Q 003466 551 PTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVH 630 (818)
Q Consensus 551 p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~ 630 (818)
...++.+..+ ..| .+.+++.+. +++.+|++.-+ +
T Consensus 134 --------v~~v~~~~~~-----------~~~------------------~~~l~~~i~--------~~t~lv~i~~~-~ 167 (398)
T TIGR03392 134 --------VVKLPIGADL-----------LPD------------------IRQLPELLT--------PRTRILALGQM-S 167 (398)
T ss_pred --------EEEEecCCCC-----------CcC------------------HHHHHHHhc--------cCceEEEEECc-c
Confidence 0011111000 001 145666664 23456666654 7
Q ss_pred cCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHHH
Q 003466 631 AAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVF 708 (818)
Q Consensus 631 g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~ 708 (818)
...|.+.+ +++|.++|++||+++|+|++|. +|.. . .......+|++++| |.+|- .-+|.+.++++++
T Consensus 168 n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~-~---~~~~~~~~d~~~~s~~K~~gp--~G~G~l~~~~~~~ 236 (398)
T TIGR03392 168 NVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG-P---PDVQALDIDFYAFSGHKLYGP--TGIGVLYGKTELL 236 (398)
T ss_pred ccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC-C---CChhhcCCCEEEEecccccCC--CceEEEEEcHHHH
Confidence 77888876 8999999999999999999994 4322 1 11122347999999 96542 1267788888876
Q ss_pred hhccC---------------------------ChH-------------HH---------------HHHHHHHHHcCCCee
Q 003466 709 DSFVG---------------------------DSK-------------LW---------------DLELIQQISSHRTVQ 733 (818)
Q Consensus 709 ~~l~~---------------------------~~~-------------~~---------------~~~l~~~l~~~~~v~ 733 (818)
+.+.. +.. .+ .+.+.+.+...+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~ 316 (398)
T TIGR03392 237 EAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFR 316 (398)
T ss_pred hhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 54421 000 11 111223344444332
Q ss_pred EEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------------CCEEEEECCCCChHHHHHHHHH
Q 003466 734 RVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------------GNVIYLMCGPCSSPEVCSQLLL 799 (818)
Q Consensus 734 ~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------------g~~ir~~ppl~~t~edId~~~~ 799 (818)
-.. ....++.+.+... .+..+.+.|.++||.++++ ++.+|+++....|++||+++++
T Consensus 317 ~~~~~~~~i~~~~~~~~---------~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~ 387 (398)
T TIGR03392 317 SFRCPGSSLLAFDFAGV---------HHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVD 387 (398)
T ss_pred EeCCCCCcEEEEEeCCc---------CHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHH
Confidence 111 1233454444321 1346778889999999852 2579999999999999999999
Q ss_pred HHHHHHHHH
Q 003466 800 KLYQRLEEF 808 (818)
Q Consensus 800 ~l~~~l~~l 808 (818)
+|+++++.+
T Consensus 388 ~l~~~~~~~ 396 (398)
T TIGR03392 388 AVGAALELL 396 (398)
T ss_pred HHHHHHHHh
Confidence 999987754
No 146
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.29 E-value=2.4e-10 Score=127.59 Aligned_cols=289 Identities=9% Similarity=0.021 Sum_probs=167.7
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
.+||+.++.. .+| . +|.+.+|+.++++.+.+... .-..+|.+.+++.++-. .+.+++++++++|...+++
T Consensus 30 ~~i~l~~n~~--~~~-~-~~~v~~a~~~~~~~~~~~p~-----~g~~~lr~~ia~~~~~~-~~~i~~t~G~~~~l~~~~~ 99 (359)
T PRK03158 30 KIVKLASNEN--PYG-P-SPKVKEAIAAHLDELALYPD-----GYAPELRTKVAKHLGVD-EEQLLFGAGLDEVIQMISR 99 (359)
T ss_pred ceEEecCCCC--CCC-C-CHHHHHHHHHHHHHhhcCCC-----CcHHHHHHHHHHHhCCC-HHHEEECCCHHHHHHHHHH
Confidence 6788877432 355 3 79999999998876543321 12345556666655422 3689999999998887766
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
... +.| ..|++.+.+|++....+ ...|...
T Consensus 100 ~~~-----~~g----------------d~v~~~~p~y~~~~~~~-~~~g~~~---------------------------- 129 (359)
T PRK03158 100 ALL-----NPG----------------TNTVMAEPTFSQYRHNA-IIEGAEV---------------------------- 129 (359)
T ss_pred HHh-----CCC----------------CEEEEcCCCHHHHHHHH-HHcCCeE----------------------------
Confidence 541 122 36888888888733211 1111110
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
..++..+ + ..| .+.+++.+. .++.++++... ++..|.+.+
T Consensus 130 ~~~~~~~-~-----------~~d------------------~~~l~~~~~--------~~~~~v~i~~p-~NPtG~~~~- 169 (359)
T PRK03158 130 REVPLKD-G-----------GHD------------------LEAMLKAID--------EQTKIVWICNP-NNPTGTYVN- 169 (359)
T ss_pred EEEecCC-C-----------CcC------------------HHHHHHhcC--------CCCCEEEEeCC-CCCCCCCCC-
Confidence 0111100 0 001 134444442 24456666554 888998885
Q ss_pred HHHHHHHHHHHHhcCCcEEEeecccCcccCCc-cchhcccCCCC-cEE--Eeccccc-CCccccceeecchHHHhhccCC
Q 003466 640 PLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-ETTADLLGCVP-DIA--CYGKLLT-GGVIPLAATLATNAVFDSFVGD 714 (818)
Q Consensus 640 ~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~~a~e~~gv~P-Div--tlgKgLg-gGy~PlsAvl~~~~i~~~l~~~ 714 (818)
.+-+.++.+.|+ +|+++|+||++..|-..+. .......+-.+ .++ +|||.+| .| +.+|.+++++++++.+...
T Consensus 170 ~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~v~~~~~~~~~~~~ 247 (359)
T PRK03158 170 HEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAA-LRVGYGIASEELIEKLNIA 247 (359)
T ss_pred HHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcc-hhhehhcCCHHHHHHHHHh
Confidence 443444444442 6999999999976522111 11111111112 233 8999998 67 7999999999988765321
Q ss_pred hH--------------HH----------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHH
Q 003466 715 SK--------------LW----------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLL 764 (818)
Q Consensus 715 ~~--------------~~----------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~ 764 (818)
.. .+ .+.+.+.+++++ +..+...|.++-+.+..+ +..++
T Consensus 248 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~~~~~~----------~~~~~ 316 (359)
T PRK03158 248 RPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFVDTGRD----------ANELF 316 (359)
T ss_pred cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEEECCCC----------HHHHH
Confidence 10 00 011223344443 323445566666655311 45688
Q ss_pred HHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 765 KKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 765 ~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
+.|.++||++.|+ .+.+|+... +++|+++++++|+++
T Consensus 317 ~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 317 EALLKKGYIVRSGAALGFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 8999999999983 367888754 789999999999775
No 147
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.29 E-value=4.3e-10 Score=125.71 Aligned_cols=300 Identities=11% Similarity=0.018 Sum_probs=164.8
Q ss_pred CCCCCHHHHHHHHHhhhhcccccCCC-----CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhc
Q 003466 414 DATLQIELARDMGYTAARFGHVMFPE-----NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFD 488 (818)
Q Consensus 414 Gh~~hp~V~eAi~~q~~~~~~~~~~~-----~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~ 488 (818)
|+- .|++++++.+....++...+.. ..++...++.+++++++| .+.++++++|++|+..++.... .
T Consensus 11 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g---~~~i~~~~g~t~al~~~l~~~~-----~ 81 (361)
T cd06452 11 GRL-TPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG---MDEARVTPGAREGKFAVMHSLC-----E 81 (361)
T ss_pred CCC-CHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC---CceEEEeCCHHHHHHHHHHHhc-----C
Confidence 556 7787777777664443322111 124678899999999987 3789999999999999887651 1
Q ss_pred ccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchh
Q 003466 489 HEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWL 568 (818)
Q Consensus 489 ~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~ 568 (818)
+| .+|++...+|.+ ...++...|... +.+|...
T Consensus 82 ~g----------------d~Vl~~~~~~~~-~~~~~~~~g~~~------------------------------~~v~~~~ 114 (361)
T cd06452 82 KG----------------DWVVVDGLAHYT-SYVAAERAGLNV------------------------------REVPNTG 114 (361)
T ss_pred CC----------------CEEEEcCCcchH-HHHHHHhcCCEE------------------------------EEEecCC
Confidence 22 245555444433 332222222110 0011000
Q ss_pred hhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHH
Q 003466 569 YSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVK 648 (818)
Q Consensus 569 ~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~Lre 648 (818)
. ++. ..| .+.+++.+.+.. .....++.+|++... .+..|...+ +++|.+
T Consensus 115 ~------~~~-~~d------------------~~~l~~~l~~~~-~~~~~~~~lv~l~~p-~n~tG~~~~----~~~i~~ 163 (361)
T cd06452 115 H------PEY-HIT------------------PEGYAEVIEEVK-DEFGKPPALALLTHV-DGNYGNLHD----AKKIAK 163 (361)
T ss_pred C------CCc-ccC------------------HHHHHHHHHHHh-hccCCCceEEEEECC-CCCCeeecc----HHHHHH
Confidence 0 000 001 144555554200 000135667776654 566676554 899999
Q ss_pred HHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCccccceeecchHHHhhccCCh-------------
Q 003466 649 ECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVIPLAATLATNAVFDSFVGDS------------- 715 (818)
Q Consensus 649 Lc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~------------- 715 (818)
+|+++|+++|+||++. +|... +....+|..-.+.+++|.++++ .++|.+++++++++.+....
T Consensus 164 ~~~~~~~~vivD~a~~-~g~~~--~~~~~~~~d~~~~s~~K~l~~~-~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 239 (361)
T cd06452 164 VCHEYGVPLLLNGAYT-VGRMP--VSGKELGADFIVGSGHKSMAAS-APIGVLATTEEWADIVFRTSQMFKIKEVELLGC 239 (361)
T ss_pred HHHHcCCeEEEECCcc-cCCcC--CCHHHcCCCEEEecCCccccCC-CCeEEEEECHHHHHHHhccccccccceeeeecc
Confidence 9999999999999994 44322 2223345422344788999876 48899999998887753210
Q ss_pred ------H--------HHH-------------HHHHHHHHcCCCeeEE---EeeeeEEEEEEecCcccCCCchHHHHHHHH
Q 003466 716 ------K--------LWD-------------LELIQQISSHRTVQRV---VALGTLCAIELQAAGCNAGYGSLYAASLLK 765 (818)
Q Consensus 716 ------~--------~~~-------------~~l~~~l~~~~~v~~v---rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~ 765 (818)
. .+. +.+.+.+++.+.+.-+ .+...++.++...-..........+..+.+
T Consensus 240 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (361)
T cd06452 240 TLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYS 319 (361)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHH
Confidence 0 000 1223334444332111 011123333321000000000112346889
Q ss_pred HHHhCCceEeecC--CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 766 KLREDGVYMRPLG--NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 766 ~l~e~Gvlv~p~g--~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
.|+++||+....+ ..+|+.. +-+|++|++.++++|++++
T Consensus 320 ~L~~~gI~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 320 ELKKRGIHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred HHHHcCceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 9999999975433 4566665 4479999999999998653
No 148
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.29 E-value=1.3e-09 Score=123.46 Aligned_cols=298 Identities=10% Similarity=0.060 Sum_probs=176.8
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCC------CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPE------NVYEPALECAELLLQGVGKGWASRAYFSDNGSTA 473 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~------~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA 473 (818)
-|||-.+ .|-- .+.+.+|+.+.++........+ ...+...++.++|+++++....+.++|+++++++
T Consensus 21 ~yld~a~------~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~ 93 (401)
T PRK10874 21 VYLDSAA------TALK-PQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTES 93 (401)
T ss_pred EEEeCCc------ccCC-CHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHH
Confidence 6788554 5555 7889999988776532111000 0133455677788888875224679999999999
Q ss_pred HHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccc---cCCCCCCCcCCCCcccCCCcccCC
Q 003466 474 IEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEA---QAPSPYTGFLQQPWYSGRGLFLDP 550 (818)
Q Consensus 474 ~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~---tg~~~~~~~~~~p~~~~~~~~~~~ 550 (818)
+..+++.... -.-+.| .+||+.+..|++....-..+ .|..
T Consensus 94 i~~~~~~~~~-~~~~~g----------------d~vl~~~~~~~s~~~~~~~~~~~~g~~-------------------- 136 (401)
T PRK10874 94 INLVAQSYAR-PRLQPG----------------DEIIVSEAEHHANLVPWLMVAQQTGAK-------------------- 136 (401)
T ss_pred HHHHHHHhhh-ccCCCc----------------CEEEECCcchHHHHHHHHHHHHHhCCE--------------------
Confidence 9998876510 000111 36888888777632111111 1110
Q ss_pred CcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccc
Q 003466 551 PTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVH 630 (818)
Q Consensus 551 p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~ 630 (818)
...++.+..+ ..| .+.+++.+. .++.+|++.-+ +
T Consensus 137 --------v~~v~~~~~~-----------~~d------------------~~~l~~~i~--------~~t~lv~i~~~-~ 170 (401)
T PRK10874 137 --------VVKLPLGADR-----------LPD------------------VDLLPELIT--------PRTRILALGQM-S 170 (401)
T ss_pred --------EEEEecCCCC-----------cCC------------------HHHHHHhcC--------cCcEEEEEeCC-c
Confidence 0011111000 001 245666553 24456666665 7
Q ss_pred cCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--cccc-CCccccceeecchHH
Q 003466 631 AAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLT-GGVIPLAATLATNAV 707 (818)
Q Consensus 631 g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLg-gGy~PlsAvl~~~~i 707 (818)
...|.+.+ +++|.++|+++|+++|+|++|. +|..- .......+|+++++ |.+| .| +|.+.+++++
T Consensus 171 n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~~gp~G---~G~l~~~~~~ 238 (401)
T PRK10874 171 NVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHFP----ADVQALDIDFYAFSGHKLYGPTG---IGVLYGKSEL 238 (401)
T ss_pred ccccCcCC----HHHHHHHHHHcCCEEEEECCcc-ccccc----CCchhcCCCEEEEecccccCCCc---cEEEEEchHH
Confidence 77888876 8999999999999999999994 43321 11122347988777 9654 23 4777888887
Q ss_pred HhhccC---------------------------ChH-------------HH---------------HHHHHHHHHcCCCe
Q 003466 708 FDSFVG---------------------------DSK-------------LW---------------DLELIQQISSHRTV 732 (818)
Q Consensus 708 ~~~l~~---------------------------~~~-------------~~---------------~~~l~~~l~~~~~v 732 (818)
++.+.. +.. .+ .+.+.+.+++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~ 318 (401)
T PRK10874 239 LEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGF 318 (401)
T ss_pred HhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 765420 000 01 11123344455443
Q ss_pred eEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------------CCEEEEECCCCChHHHHHHHH
Q 003466 733 QRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------------GNVIYLMCGPCSSPEVCSQLL 798 (818)
Q Consensus 733 ~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------------g~~ir~~ppl~~t~edId~~~ 798 (818)
.-+. ..+.++.+.+... .+..+.+.|.++||.++++ .+.+|+++....|++|||+++
T Consensus 319 ~~~~~~~~~i~~~~~~~~---------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll 389 (401)
T PRK10874 319 RSFRCQDSSLLAFDFAGV---------HHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALV 389 (401)
T ss_pred EEeCCCCCcEEEEEECCc---------CHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHH
Confidence 3221 1233455544321 1356778889999999762 257999999999999999999
Q ss_pred HHHHHHHHHH
Q 003466 799 LKLYQRLEEF 808 (818)
Q Consensus 799 ~~l~~~l~~l 808 (818)
++|+++++.+
T Consensus 390 ~al~~~~~~~ 399 (401)
T PRK10874 390 NAVDRALELL 399 (401)
T ss_pred HHHHHHHHHh
Confidence 9999987754
No 149
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.28 E-value=2.6e-10 Score=128.14 Aligned_cols=295 Identities=12% Similarity=0.121 Sum_probs=169.9
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
.+|++..+ ..++..+|++.+|+.+.+.....+. .+...+|.+.|++..+-. -+.++++++.+++...+++
T Consensus 33 ~~~~l~~~----~~~~~~~~~~~~a~~~~~~~~~~Y~-----~~~~~~Lr~~ia~~~~~~-~~~I~it~G~~~~l~~~~~ 102 (369)
T PRK08153 33 FRARIGAN----ESGFGPSPSVIAAMREAAAEIWKYG-----DPENHDLRHALAAHHGVA-PENIMVGEGIDGLLGLIVR 102 (369)
T ss_pred ceeEecCC----CCCCCCCHHHHHHHHHHHHHhhcCC-----CCccHHHHHHHHHHhCCC-HHHEEEcCCHHHHHHHHHH
Confidence 35677653 2244447899999998765432211 111456777777766532 2578988888888887777
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
.. ...| ..|++.+.+|.+....+ ...|..
T Consensus 103 ~~-----~~~g----------------d~vlv~~p~y~~~~~~~-~~~g~~----------------------------- 131 (369)
T PRK08153 103 LY-----VEPG----------------DPVVTSLGAYPTFNYHV-AGFGGR----------------------------- 131 (369)
T ss_pred Hh-----cCCC----------------CEEEECCCcchHHHHHH-HHcCCe-----------------------------
Confidence 54 1122 25666666666533111 111111
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEE-EEccccccCCCcccC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGAL-IIEPVVHAAGGMHMV 638 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAV-IvEPV~~g~gG~~~~ 638 (818)
.+.+|. .++. . . .+.+++.+. ..++.+| +..| +...|.+.
T Consensus 132 -~~~vp~-------------~~~~-------~---~-----~~~l~~~~~-------~~~~~~i~l~~P--~NPtG~~~- 172 (369)
T PRK08153 132 -LVTVPY-------------RDDR-------E---D-----LDALLDAAR-------RENAPLVYLANP--DNPMGSWH- 172 (369)
T ss_pred -EEEeeC-------------CCCC-------C---C-----HHHHHHHhc-------ccCCcEEEEeCC--CCCCCCCC-
Confidence 111120 0110 0 0 123333332 2234444 4477 45557766
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcE---EEeccccc-CCccccceeecchHHHhhccCC
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDI---ACYGKLLT-GGVIPLAATLATNAVFDSFVGD 714 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDi---vtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~ 714 (818)
+.+.++++.++|++ |+++|+||++..|+..|...... ...|++ -+|||.+| .| +.+|.+++++++++.+...
T Consensus 173 ~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~~SfSK~~g~~G-lRiG~~v~~~~~~~~l~~~ 248 (369)
T PRK08153 173 PAADIVAFIEALPE-TTLLVLDEAYCETAPAGAAPPID--TDDPNVIRMRTFSKAYGLAG-ARVGYAIGAPGTIKAFDKV 248 (369)
T ss_pred CHHHHHHHHHhCCC-CcEEEEeCchhhhcCcccchhhh--hcCCCEEEEecchHhccCcc-hheeeeecCHHHHHHHHHh
Confidence 66677777777764 99999999998886544322111 123453 38999998 78 7999999999988765321
Q ss_pred hH--------------HH----------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHH
Q 003466 715 SK--------------LW----------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLL 764 (818)
Q Consensus 715 ~~--------------~~----------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~ 764 (818)
.. .+ .+.+.+.++.++. ......|.++-+.+..+ ...+..+.
T Consensus 249 ~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~~~~~~-------~~~a~~l~ 320 (369)
T PRK08153 249 RNHFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAIDCGRD-------GAFARAVL 320 (369)
T ss_pred hcCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEEECCCC-------cccHHHHH
Confidence 10 00 0112233444432 11223455555544321 13467889
Q ss_pred HHHHhCCceEe-ec----CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 765 KKLREDGVYMR-PL----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 765 ~~l~e~Gvlv~-p~----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+.|+++||+++ |. .+.+|++.. +++|++.++++|++++..++
T Consensus 321 ~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 321 DGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred HHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 99999999996 42 256787754 68999999999999886543
No 150
>PRK10534 L-threonine aldolase; Provisional
Probab=99.27 E-value=3.3e-10 Score=125.06 Aligned_cols=292 Identities=13% Similarity=0.050 Sum_probs=167.0
Q ss_pred eeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHH
Q 003466 401 QFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKM 480 (818)
Q Consensus 401 ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALkl 480 (818)
+||+.| +.+-| - +|.+.+|+.+.......+ +..+...+|.++|++..| .+.+.++++|++|+..++..
T Consensus 1 ~~~~~~---~~~~~-p-~~~~~~a~~~~~~~~~~Y----~~~~~~~~L~~~la~~~g---~~~~~v~~~g~~a~~~~l~~ 68 (333)
T PRK10534 1 MIDLRS---DTVTR-P-SRAMLEAMMAAPVGDDVY----GDDPTVNALQDYAAELSG---KEAALFLPTGTQANLVALLS 68 (333)
T ss_pred Cccccc---ccCCC-C-CHHHHHHHHhccCCCccc----CCCHHHHHHHHHHHHHhC---CCeEEEeCchHHHHHHHHHH
Confidence 478888 66667 6 899999998755433211 145678899999999987 46778899999999888875
Q ss_pred HHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCcccc--ccccCCCCCCCcCCCCcccCCCcccCCCcccccCc
Q 003466 481 AFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGA--MEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNS 558 (818)
Q Consensus 481 A~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~a--ls~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~ 558 (818)
. -..| .+|+... .+|...+.+ ....+..
T Consensus 69 ~-----~~~g----------------d~vi~~~-~~~~~~~~~~~~~~~~~~---------------------------- 98 (333)
T PRK10534 69 H-----CERG----------------EEYIVGQ-AAHNYLYEAGGAAVLGSI---------------------------- 98 (333)
T ss_pred h-----cCCC----------------CeeEEec-hhhhhHhcCCchHHhcCc----------------------------
Confidence 4 1122 2455433 333221111 0111100
Q ss_pred ceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccC
Q 003466 559 KWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMV 638 (818)
Q Consensus 559 ~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~ 638 (818)
..+.+|... +. ..| .+.+++.+.... .+..+..+|+++.- . .|.+.
T Consensus 99 -~~~~~~~~~--------~~-~~d------------------~~~l~~~i~~~~--~~~~~~~lv~l~np-~--~G~v~- 144 (333)
T PRK10534 99 -QPQPIDAAA--------DG-TLP------------------LDKVAAKIKPDD--IHFARTRLLSLENT-H--NGKVL- 144 (333)
T ss_pred -eEEeecCCC--------CC-CCC------------------HHHHHHhhcccC--cCcccceEEEEecC-C--CCeec-
Confidence 000011000 00 011 144555553100 01114567777743 3 36666
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccC---CccchhcccCCCCc--EEEecccccCCccccc-eeecchHHHhhcc
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRL---GVETTADLLGCVPD--IACYGKLLTGGVIPLA-ATLATNAVFDSFV 712 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRt---G~~~a~e~~gv~PD--ivtlgKgLggGy~Pls-Avl~~~~i~~~l~ 712 (818)
+.+.++++.++|++||+++|+||++. |+.. |.... ...-.+| +++|||+.+. ++| ++++++++++.+.
T Consensus 145 ~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~~--~~~~~~~~~~~s~SK~~~~---~~G~~~~~~~~~i~~~~ 218 (333)
T PRK10534 145 PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCELK--EITQYCDSFTICLSKGLGT---PVGSLLVGNRDYIKRAR 218 (333)
T ss_pred CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCHH--HHHhcCCEEEEEeEcCCCC---cccceEEcCHHHHHHHH
Confidence 68888999999999999999999875 5322 21111 0001224 4589997663 466 4778888877653
Q ss_pred CCh-----------H-------HHH-------------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHH
Q 003466 713 GDS-----------K-------LWD-------------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAA 761 (818)
Q Consensus 713 ~~~-----------~-------~~~-------------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~ 761 (818)
... . .++ +.+.+.|++.+. .-....+.++-+.+.. ..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~nfv~~~~~~---------~~~~ 288 (333)
T PRK10534 219 RWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLREAGA-DVMRQDTNMLFVRVGE---------EQAA 288 (333)
T ss_pred HHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC-ccCCCCceEEEEECCc---------hhHH
Confidence 210 0 111 112333444432 1112234444444321 1245
Q ss_pred HHHHHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 762 SLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 762 ~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
.+.+.|+++||++++. ..+|+...+.+|++++++++++|++.+
T Consensus 289 ~~~~~l~~~gi~v~~~-~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 289 ALGEYMRERNVLINAS-PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred HHHHHHHHcCeeecCC-ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 6788999999999875 457777766789999999999998665
No 151
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.26 E-value=6.9e-10 Score=123.80 Aligned_cols=288 Identities=12% Similarity=0.100 Sum_probs=162.6
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCCh-hHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNG-STAIEIAL 478 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SG-seA~e~AL 478 (818)
++||+.++. +.+| . .|.+.+++.+.+..+... ..+...+|.+.++++++-. .+.++++.+| ++++..++
T Consensus 35 ~~i~l~~~~--~~~~-~-~~~~~~~~~~~~~~~~~y-----~~~~~~~lr~~ia~~~~~~-~~~i~~~~~Ga~~~i~~~~ 104 (361)
T PRK00950 35 SIIKLGSNE--NPLG-P-SPKAVEAIEKELSKIHRY-----PEPDAPELREALSKYTGVP-VENIIVGGDGMDEVIDTLM 104 (361)
T ss_pred ceEEccCCC--CCCC-C-CHHHHHHHHHHHHhhcCC-----CCCCHHHHHHHHHHHhCCC-HHHEEEeCCCHHHHHHHHH
Confidence 788887642 3566 3 689999998877654321 1222367778888877532 2578874455 56667776
Q ss_pred HHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCc
Q 003466 479 KMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNS 558 (818)
Q Consensus 479 klA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~ 558 (818)
+.. .+.| ..|++.+.+|..... ++...|...
T Consensus 105 ~~~-----~~~g----------------d~vlv~~p~y~~~~~-~~~~~g~~~--------------------------- 135 (361)
T PRK00950 105 RTF-----IDPG----------------DEVIIPTPTFSYYEI-SAKAHGAKP--------------------------- 135 (361)
T ss_pred HHh-----cCCC----------------CEEEEcCCChHHHHH-HHHHcCCEE---------------------------
Confidence 654 1122 256666666654221 111111110
Q ss_pred ceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCCccc
Q 003466 559 KWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALII-EPVVHAAGGMHM 637 (818)
Q Consensus 559 ~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG~~~ 637 (818)
..++.+..+ -.| .+.+++.+. .++.++++ .| ++..|.+.
T Consensus 136 -~~~~~~~~~-----------~~~------------------~~~l~~~~~--------~~~~~v~~~~p--~nptG~~~ 175 (361)
T PRK00950 136 -VYAKREEDF-----------SLD------------------VDSVLNAIT--------EKTKVIFLCTP--NNPTGNLI 175 (361)
T ss_pred -EEeecCCCC-----------CcC------------------HHHHHHHhc--------cCCCEEEEeCC--CCCCCCCc
Confidence 001000000 000 144555553 23344444 55 67778877
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch-hcccCCCCcEEEeccccc-CCccccceeecchHHHhhccCCh
Q 003466 638 VDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT-ADLLGCVPDIACYGKLLT-GGVIPLAATLATNAVFDSFVGDS 715 (818)
Q Consensus 638 ~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a-~e~~gv~PDivtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~ 715 (818)
+ .+++.++|+++|+++|+||++.+|. .+.... ...++-.--+.+|||.+| .| +.+|.+++++++++.+....
T Consensus 176 ~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~ 249 (361)
T PRK00950 176 P----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRTFSKVFGLAG-LRIGYGFVPEWLIDYYMRAK 249 (361)
T ss_pred C----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEeehHhhcCch-hhcchhcCCHHHHHHHHHhc
Confidence 6 5688899999999999999998774 122111 111111111338999998 67 78899999998886553211
Q ss_pred H--------------------HHHH------HHHHHH-HcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHH
Q 003466 716 K--------------------LWDL------ELIQQI-SSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLR 768 (818)
Q Consensus 716 ~--------------------~~~~------~l~~~l-~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~ 768 (818)
. .+.+ +.++.+ +... +.-....|.++-+.+. . ..+..+++.|.
T Consensus 250 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~-~~~~~~~~~~i~~~~~-~--------~~~~~~~~~l~ 319 (361)
T PRK00950 250 TPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP-FKVYPSEANFVLVDVT-P--------MTAKEFCEELL 319 (361)
T ss_pred CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC-eeECCCcceEEEEECC-C--------CCHHHHHHHHH
Confidence 0 0110 111112 1122 1111223444445552 1 12567889999
Q ss_pred hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 769 EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 769 e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
++||+++++ .+.+|++.. +++++++++++|++++
T Consensus 320 ~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 320 KRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred HCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 999999862 247888865 6789999999998765
No 152
>PRK02948 cysteine desulfurase; Provisional
Probab=99.25 E-value=9.6e-10 Score=123.71 Aligned_cols=299 Identities=11% Similarity=0.070 Sum_probs=170.2
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCC-----CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPEN-----VYEPALECAELLLQGVGKGWASRAYFSDNGSTAI 474 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~-----~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~ 474 (818)
-|+|..+ .|.- ++.+++|+.+.++.......... ..+...++.+.|+++++.. -+.++|++++++|+
T Consensus 2 ~yld~a~------~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~i~~~~g~t~a~ 73 (381)
T PRK02948 2 IYLDYAA------TTPM-SKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGE-EQGIYFTSGGTESN 73 (381)
T ss_pred EeccCCC------CCCC-CHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCcHHHHH
Confidence 3677543 5556 89999999987765321111001 1245667778888888643 36799999999999
Q ss_pred HHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccc
Q 003466 475 EIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVF 554 (818)
Q Consensus 475 e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~ 554 (818)
..+++.+.+... ++.+.|......|.+........... |..
T Consensus 74 ~~~~~~~~~~~~------------------~~g~~vv~~~~~h~s~~~~~~~~~~~--------------g~~------- 114 (381)
T PRK02948 74 YLAIQSLLNALP------------------QNKKHIITTPMEHASIHSYFQSLESQ--------------GYT------- 114 (381)
T ss_pred HHHHHHHHHhcc------------------CCCCEEEECCcccHHHHHHHHHHHhC--------------CCE-------
Confidence 999887632110 11234555566666543332211000 000
Q ss_pred ccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCC
Q 003466 555 MYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGG 634 (818)
Q Consensus 555 ~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG 634 (818)
...++..... ..| .+.+++.+. ++...|+++-+ .+..|
T Consensus 115 ----v~~v~~~~~~-----------~~d------------------~~~l~~~l~--------~~~~lv~~~~~-~n~tG 152 (381)
T PRK02948 115 ----VTEIPVDKSG-----------LIR------------------LVDLERAIT--------PDTVLASIQHA-NSEIG 152 (381)
T ss_pred ----EEEEeeCCCC-----------CCC------------------HHHHHHhcC--------CCCEEEEEECC-cCCcE
Confidence 0001110000 111 245555553 23467778876 78889
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCccccceeecchHH-Hhhc
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNAV-FDSF 711 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~i-~~~l 711 (818)
.+.+ +++|.++|+++|+++|+|++| .||.... ..+.++ .|++ +++|.+|- .-+|++++++++ +...
T Consensus 153 ~~~~----~~~I~~l~~~~~~~vivD~~~-~~g~~~~--~~~~~~--~d~~~~s~~K~~gp--~G~G~l~~~~~~~~~~~ 221 (381)
T PRK02948 153 TIQP----IAEIGALLKKYNVLFHSDCVQ-TFGKLPI--DVFEMG--IDSLSVSAHKIYGP--KGVGAVYINPQVRWKPV 221 (381)
T ss_pred eehh----HHHHHHHHHHcCCEEEEEChh-hcccccc--CcccCC--CCEEEecHHhcCCC--CcEEEEEEcCCCCCCCc
Confidence 8886 889999999999999999988 5765432 122333 5765 68897651 115667667654 1111
Q ss_pred ----------cCChH-------------H--------------HHHHHHHHHHcCCC-eeEEEe-----eeeEEEEEEec
Q 003466 712 ----------VGDSK-------------L--------------WDLELIQQISSHRT-VQRVVA-----LGTLCAIELQA 748 (818)
Q Consensus 712 ----------~~~~~-------------~--------------~~~~l~~~l~~~~~-v~~vrg-----~Gl~~~iel~~ 748 (818)
..... . +.+.+.+.++..+. +. ..+ ...++++.+..
T Consensus 222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~-~~~~~~~~~~~i~~~~~~~ 300 (381)
T PRK02948 222 FPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIE-VEGHSTSCLPHIIGVTIKG 300 (381)
T ss_pred ccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEE-EeCCCccCcCCEEEEEeCC
Confidence 11110 0 01122333444432 21 111 01122222221
Q ss_pred CcccCCCchHHHHHHHHHHHhCCceEeec------------------------CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 749 AGCNAGYGSLYAASLLKKLREDGVYMRPL------------------------GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 749 ~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~------------------------g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
..+..+...|.++||.++.+ ++.+|+++...+|++|+|++++.|.++
T Consensus 301 ---------~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~ 371 (381)
T PRK02948 301 ---------IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI 371 (381)
T ss_pred ---------CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 11345666788999999841 258999999999999999999999988
Q ss_pred HHHH
Q 003466 805 LEEF 808 (818)
Q Consensus 805 l~~l 808 (818)
++++
T Consensus 372 ~~~~ 375 (381)
T PRK02948 372 GNQF 375 (381)
T ss_pred HHHH
Confidence 6543
No 153
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.25 E-value=1.1e-09 Score=124.41 Aligned_cols=179 Identities=13% Similarity=0.069 Sum_probs=113.7
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCV 681 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~ 681 (818)
+.+++.++. ..+++++|++..+ ++..|.+.| +++|.++|++||+++|+|++|+ +|..- +-.+.+|+.
T Consensus 159 ~~l~~~~~~-----~~~~t~lv~~~~v-~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~~--id~~~~gvD 225 (406)
T TIGR01814 159 EDILDTIEK-----NGDDIAVILLSGV-QYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNVP--LDLHDWGVD 225 (406)
T ss_pred HHHHHHHHh-----cCCCeEEEEEecc-ccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCcc--cccccCCCC
Confidence 345555542 2357889999998 888999987 9999999999999999999994 54442 223445554
Q ss_pred CcEEEecccccCCccccceeecchHHHhhccC-----------------------------ChH-------------HH-
Q 003466 682 PDIACYGKLLTGGVIPLAATLATNAVFDSFVG-----------------------------DSK-------------LW- 718 (818)
Q Consensus 682 PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~-----------------------------~~~-------------~~- 718 (818)
..+.+.-|.|.|| |-+++..+++..+.+.. +.. .+
T Consensus 226 ~~~~s~hK~l~g~--pG~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~ 303 (406)
T TIGR01814 226 FACWCTYKYLNAG--PGAGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFD 303 (406)
T ss_pred EEEEcCccccCCC--CCeEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHH
Confidence 4455778999877 33443443332211100 000 01
Q ss_pred --------------HHHHHHHHHcC----CCee-----EEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEe
Q 003466 719 --------------DLELIQQISSH----RTVQ-----RVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMR 775 (818)
Q Consensus 719 --------------~~~l~~~l~~~----~~v~-----~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~ 775 (818)
.+.+.+.+++. +.+. +.+..+.++.+.+. . .+..+.+.|.++||++.
T Consensus 304 ~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~---------~~~~~~~~L~~~gi~v~ 373 (406)
T TIGR01814 304 QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V---------PGKAVFQALIKRGVIGD 373 (406)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C---------CHHHHHHHHHHCCEEEe
Confidence 11222333332 1121 11223445666553 1 14567888999999987
Q ss_pred ecC-CEEEEEC-CCCChHHHHHHHHHHHHHHH
Q 003466 776 PLG-NVIYLMC-GPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 776 p~g-~~ir~~p-pl~~t~edId~~~~~l~~~l 805 (818)
..+ ..+|++| +...|++|||+++++|++++
T Consensus 374 ~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 374 KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 644 6899999 78899999999999998764
No 154
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.23 E-value=1.6e-09 Score=121.32 Aligned_cols=286 Identities=14% Similarity=0.086 Sum_probs=158.6
Q ss_pred CHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccccccccc
Q 003466 418 QIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFL 496 (818)
Q Consensus 418 hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~ 496 (818)
+|.+.+|+....... +.........+...++.++|+++++.+ -+.++++++|++|+..++..+ +..... +
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~~~~~g~~~~~~~~~~~~-~~~~~~-~------ 103 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLP-DAYGYIVSGGTEANIQAVRAA-KNLARE-E------ 103 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCC-CCCeEEeccHHHHHHHHHHHH-HHHHhc-c------
Confidence 788888887765442 222111223455678889999988743 246788999999999998876 322110 0
Q ss_pred CCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccc
Q 003466 497 GKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHK 576 (818)
Q Consensus 497 ~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~ 576 (818)
.....|+..+.+|.+ ...++...|... ..++.+..+
T Consensus 104 -------~~g~~vl~~~~~h~~-~~~~~~~~G~~~----------------------------~~v~~~~~~-------- 139 (373)
T TIGR03812 104 -------KRTPNIIVPESAHFS-FEKAAEMLGLEL----------------------------RYAPLDEDY-------- 139 (373)
T ss_pred -------CCCcEEEECCcchHH-HHHHHHHcCCeE----------------------------EEEeeCCCC--------
Confidence 001256665554443 222222222110 001111000
Q ss_pred cccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCc
Q 003466 577 DITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIP 656 (818)
Q Consensus 577 ~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gil 656 (818)
..| .+.+++.+.+ ...+.+++.|. ...|.+.+ +++|.++|+++|++
T Consensus 140 ---~~d------------------~~~l~~~l~~-------~~~~vv~~~~~--~~tG~~~~----~~~i~~l~~~~~~~ 185 (373)
T TIGR03812 140 ---TVD------------------VKDVEDLIDD-------NTIGIVGIAGT--TELGQIDD----IEELSKIALENGIY 185 (373)
T ss_pred ---CcC------------------HHHHHHHHhh-------CcEEEEEECCC--CCCCccCC----HHHHHHHHHHcCCe
Confidence 011 2556666642 23556777763 55677765 89999999999999
Q ss_pred EEEeecccCcccCC--ccc-hhcccCC---CCcEEEe--cccccCCccccceee-cchHHHhhccC------C-------
Q 003466 657 VIFDEVFTGFWRLG--VET-TADLLGC---VPDIACY--GKLLTGGVIPLAATL-ATNAVFDSFVG------D------- 714 (818)
Q Consensus 657 LI~DEV~TGfGRtG--~~~-a~e~~gv---~PDivtl--gKgLggGy~PlsAvl-~~~~i~~~l~~------~------- 714 (818)
+|+|++|.++ -.+ .++ ......+ ..|.+++ -|-+.++ .|.|+++ .++++.+.+.. .
T Consensus 186 livD~a~~~~-~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~-~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 263 (373)
T TIGR03812 186 LHVDAAFGGF-VIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSP-IPAGGILFRSKSYLKYLSVDAPYLTVKKQATIT 263 (373)
T ss_pred EEEEcCchhH-HHHHHhcCCCCCCccccCCCCCEEEECccccCCCc-CCceEEEEeCHHHHhhhcccCcccCCCCCcceE
Confidence 9999999644 211 000 0001111 2355554 3733334 5777666 56776654310 0
Q ss_pred -hH-------------H---------------HHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHH
Q 003466 715 -SK-------------L---------------WDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLK 765 (818)
Q Consensus 715 -~~-------------~---------------~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~ 765 (818)
.+ . +.+.+.+.+++.+...-+.....++.+.+. + ...+.+
T Consensus 264 gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~-~----------~~~v~~ 332 (373)
T TIGR03812 264 GTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLNIVAFEVD-D----------PEEVRK 332 (373)
T ss_pred eechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCceEEEEEeC-C----------HHHHHH
Confidence 00 0 011233344444432111112223333221 1 236888
Q ss_pred HHHhCCceEeec--CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 766 KLREDGVYMRPL--GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 766 ~l~e~Gvlv~p~--g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
.|.++||+++.. ++.+|++++..+|++|+|+++++|++
T Consensus 333 ~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 333 KLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred HHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 999999999875 46899999999999999999999865
No 155
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.23 E-value=1.5e-09 Score=122.65 Aligned_cols=310 Identities=13% Similarity=0.046 Sum_probs=172.4
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIA 477 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~A 477 (818)
..+|+.+|... ++ . ++++.+++.+.++... .+....+..+....+++.+....+.+ ..+.+++++++++|+..+
T Consensus 32 ~~~~l~~~~~~--~~-~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 107 (393)
T PRK05764 32 DVISLGAGEPD--FD-T-PEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNA 107 (393)
T ss_pred CEEEeCCCCCC--CC-C-CHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHH
Confidence 56666665432 22 4 7899999988776422 11111223445556666665433311 125799999999999988
Q ss_pred HHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccC
Q 003466 478 LKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYN 557 (818)
Q Consensus 478 LklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 557 (818)
+.... +.| ..|+..+.+|.+.. .+....|.+.
T Consensus 108 ~~~~~-----~~g----------------d~vl~~~p~y~~~~-~~~~~~g~~~-------------------------- 139 (393)
T PRK05764 108 FMALL-----DPG----------------DEVIIPAPYWVSYP-EMVKLAGGVP-------------------------- 139 (393)
T ss_pred HHHhc-----CCC----------------CEEEecCCCCcchH-HHHHHcCCEE--------------------------
Confidence 88651 112 25777666665432 2222222110
Q ss_pred cceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEE-EEEccccccCCCcc
Q 003466 558 SKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGA-LIIEPVVHAAGGMH 636 (818)
Q Consensus 558 ~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV~~g~gG~~ 636 (818)
+.+|... +..|. -| .+.+++.+. .++.+ ++..| ++..|.+
T Consensus 140 ----~~~~~~~---------------~~~~~--~d--------~~~l~~~l~--------~~~~~v~~~~p--~NPtG~~ 180 (393)
T PRK05764 140 ----VFVPTGE---------------ENGFK--LT--------VEQLEAAIT--------PKTKALILNSP--SNPTGAV 180 (393)
T ss_pred ----EEEecCc---------------ccCCc--CC--------HHHHHHhhC--------ccceEEEEECC--CCCCCcc
Confidence 0011000 00000 00 144555553 13344 44445 5667776
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcc--cCCC-CcEE--Eeccccc-CCccccceeecchHHHh
Q 003466 637 MVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADL--LGCV-PDIA--CYGKLLT-GGVIPLAATLATNAVFD 709 (818)
Q Consensus 637 ~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~--~gv~-PDiv--tlgKgLg-gGy~PlsAvl~~~~i~~ 709 (818)
. +.+.+++|.++|++||+++|+||++..|.-.|..+ .... .+.. .+++ ++||.+| .| +.+|++++++++++
T Consensus 181 ~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G-~RiG~i~~~~~~~~ 258 (393)
T PRK05764 181 Y-SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTG-WRLGYAAGPKELIK 258 (393)
T ss_pred c-CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCcc-ceeEEEecCHHHHH
Confidence 5 67899999999999999999999997653223211 1111 1222 2233 5999998 77 68999999998877
Q ss_pred hccCCh--------H--------HHH-----------------HHHHHHHHcCCCeeEEEeee-eEEEEEEecCcccCCC
Q 003466 710 SFVGDS--------K--------LWD-----------------LELIQQISSHRTVQRVVALG-TLCAIELQAAGCNAGY 755 (818)
Q Consensus 710 ~l~~~~--------~--------~~~-----------------~~l~~~l~~~~~v~~vrg~G-l~~~iel~~~~~~~~~ 755 (818)
.+.... . .+. +.+.+.+++++.+.-....| .++-+.+.......
T Consensus 259 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~-- 336 (393)
T PRK05764 259 AMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKS-- 336 (393)
T ss_pred HHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccc--
Confidence 553210 0 110 11234455554433333444 33334443211000
Q ss_pred chHHHHHHHHHHH-hCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 756 GSLYAASLLKKLR-EDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 756 ~~~~a~~~~~~l~-e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
...+.+++..|+ ++||.+.++ .+.+|++.. ++++++++++++|.+++++
T Consensus 337 -~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~--~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 337 -ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA--TSLEDLEEGLERIERFLES 391 (393)
T ss_pred -cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 001356777776 579999873 267888754 5799999999999988764
No 156
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.23 E-value=1.2e-09 Score=118.47 Aligned_cols=296 Identities=16% Similarity=0.124 Sum_probs=164.7
Q ss_pred eecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHH
Q 003466 402 FDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 481 (818)
Q Consensus 402 lD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA 481 (818)
+||.|..|+ | . +|++.+|+.++-.... .. -+..+...+++++++++++. ..++|+.||+.||..||...
T Consensus 2 ~~f~SDn~~---g-~-~~~m~eam~~a~~~~~-~~--YG~D~~~~~~e~~~ae~~g~---~a~~Fv~sGT~aN~lal~~~ 70 (342)
T COG2008 2 IDFRSDNVA---G-P-TPEMREALAAANAVGD-DV--YGEDPTTNALEQRIAELFGK---EAALFVPSGTQANQLALAAH 70 (342)
T ss_pred CccccCccC---C-C-CHHHHHHHHhccccCC-CC--CCCCHHHHHHHHHHHHHhCC---ceEEEecCccHHHHHHHHHh
Confidence 456553332 2 4 8999999998664211 11 13467788999999999984 79999999999999999976
Q ss_pred HHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCccee
Q 003466 482 FRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWI 561 (818)
Q Consensus 482 ~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~ 561 (818)
. ++| ..+.....-|=.+..+- +...+... ..
T Consensus 71 ~-----~~~-----------------~~vi~~~~aHi~~~E~G---a~~~~~~~------------------------~~ 101 (342)
T COG2008 71 C-----QPG-----------------ESVICHETAHIYTDECG---APEFFGGG------------------------QK 101 (342)
T ss_pred c-----CCC-----------------CeEEEeccccceecccC---cHHHHcCC------------------------ce
Confidence 1 222 22333333343222211 11111000 00
Q ss_pred ecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHH
Q 003466 562 LSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPL 641 (818)
Q Consensus 562 v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~ 641 (818)
++.+.. .+- .-+ .+.++..+..- +.+......++.|.- ..++|.+. |.+
T Consensus 102 ~~~~~g--------~~G-klt------------------~e~v~~~i~~~--d~~~~~~~~~~~e~~-~te~GtVy-~l~ 150 (342)
T COG2008 102 LPIVPG--------ADG-KLT------------------PEDVEAAIRPD--DIHHAPTPLAVLENT-ATEGGTVY-PLD 150 (342)
T ss_pred eccCCC--------CCC-CcC------------------HHHHHHhhcCC--CcccCCCceEEEeec-cCCCceec-CHH
Confidence 000000 000 001 24566656531 123445667777775 66777665 899
Q ss_pred HHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC-------CCcEE--EecccccCCccccceee-cchHHHhhc
Q 003466 642 FQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC-------VPDIA--CYGKLLTGGVIPLAATL-ATNAVFDSF 711 (818)
Q Consensus 642 fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv-------~PDiv--tlgKgLggGy~PlsAvl-~~~~i~~~l 711 (818)
.++.+.++|++||+.|.+| |- |... +.-.+|+ --|.+ |++|+++ .|.++++ ++.+.+..+
T Consensus 151 el~~i~~~~k~~~l~LHmD----GA-R~~n--A~valg~~~~~~~~~~D~v~~~~tK~g~---~~~gAiv~gn~~~~~~a 220 (342)
T COG2008 151 ELEAISAVCKEHGLPLHMD----GA-RLAN--ALVALGVALKTIKSYVDSVSFCLTKGGG---APVGAIVFGNRDFAKRA 220 (342)
T ss_pred HHHHHHHHHHHhCCceeec----hH-HHHH--HHHHcCCCHHHHHhhCCEEEEecccCCc---ceeeeEEEcCHHHHHHH
Confidence 9999999999999999999 43 3322 1112221 23555 5556544 4677766 566666544
Q ss_pred cCChH------------------HHHH---------------HHHHHHHcCCCeeEEE-eeeeEEEEEEecCcccCCCch
Q 003466 712 VGDSK------------------LWDL---------------ELIQQISSHRTVQRVV-ALGTLCAIELQAAGCNAGYGS 757 (818)
Q Consensus 712 ~~~~~------------------~~~~---------------~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~~ 757 (818)
...-+ ++++ .|.+.+...+.+.-.. ..--++-+.+... .
T Consensus 221 ~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~-------~ 293 (342)
T COG2008 221 RRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPES-------A 293 (342)
T ss_pred HHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChH-------H
Confidence 21100 1111 1222222222211110 1111222222211 1
Q ss_pred HHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 758 LYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 758 ~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
..+......+++.|++..+.+..+||..+..+|++||++++..+++.+
T Consensus 294 i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 IEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 234455667778888887766789999999999999999999887653
No 157
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.22 E-value=4.8e-09 Score=118.84 Aligned_cols=169 Identities=10% Similarity=0.038 Sum_probs=109.2
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEE--ecccccCCcc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIAC--YGKLLTGGVI 696 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgKgLggGy~ 696 (818)
++.+|++.-+ +...|...+ +++|.++|++||+++|+|++|. +|..- .... ...+|+++ +.|.+|. .
T Consensus 159 ~~~lv~~~~~-~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~~--~~~~--~~~~d~~~~s~~K~~gp--~ 226 (403)
T TIGR01979 159 KTKLVAITHV-SNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHMP--VDVQ--ALDCDFYVFSGHKMYGP--T 226 (403)
T ss_pred CCeEEEEEcc-cccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCccc--cCcc--ccCCCEEEEecccccCC--C
Confidence 4567777765 777888886 8999999999999999999994 43211 1112 23478875 5597642 1
Q ss_pred ccceeecchHHHhhccC---------------------------ChH-------------HHH---------------HH
Q 003466 697 PLAATLATNAVFDSFVG---------------------------DSK-------------LWD---------------LE 721 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~---------------------------~~~-------------~~~---------------~~ 721 (818)
-+|++.+++++.+.+.. +.. .+. +.
T Consensus 227 G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~ 306 (403)
T TIGR01979 227 GIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAY 306 (403)
T ss_pred CceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 26778888887664320 000 010 11
Q ss_pred HHHHHHcCCCeeEEE-----eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------------CCEEEE
Q 003466 722 LIQQISSHRTVQRVV-----ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------------GNVIYL 783 (818)
Q Consensus 722 l~~~l~~~~~v~~vr-----g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------------g~~ir~ 783 (818)
+.+.++..+.+.-+. ..+.++.+.+... ....+.+.|.++||.++++ +..+|+
T Consensus 307 l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRi 377 (403)
T TIGR01979 307 ALERLGEIPGLRIYGPRDAEDRGGIISFNVEGV---------HPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRA 377 (403)
T ss_pred HHHHHhcCCCEEEeCCCCccccCceEEEEeCCc---------CHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEE
Confidence 223344444332111 1255666665322 1345778888999999752 357999
Q ss_pred ECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 784 MCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 784 ~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+++...|++|+++++++|+++++.+
T Consensus 378 S~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 378 SFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EeccCCCHHHHHHHHHHHHHHHHHh
Confidence 9999899999999999999887664
No 158
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.22 E-value=1e-09 Score=121.52 Aligned_cols=252 Identities=15% Similarity=0.132 Sum_probs=148.6
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCcc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTL 521 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~ 521 (818)
.+...+++++|+++++. +.+++++||++|++.+++.+ +. .. ..+||+...+||+...
T Consensus 17 ~~~~~~~~~~la~~~~~---~~~~~~~sgt~al~~~l~~l-~~---~~----------------gd~vl~~~~~~~~~~~ 73 (352)
T cd00616 17 GPKVREFEKAFAEYLGV---KYAVAVSSGTAALHLALRAL-GI---GP----------------GDEVIVPSFTFVATAN 73 (352)
T ss_pred CHHHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHHc-CC---CC----------------CCEEEeCCcchHHHHH
Confidence 56788999999999973 57889999999999999876 11 11 2368888888886432
Q ss_pred ccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcc-hhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 522 GAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPE-WLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 522 ~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~-~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
++...|... ..++.+. .+ ..|
T Consensus 74 -~~~~~g~~~----------------------------~~~~~~~~~~-----------~~d------------------ 95 (352)
T cd00616 74 -AILLLGATP----------------------------VFVDIDPDTY-----------NID------------------ 95 (352)
T ss_pred -HHHHcCCeE----------------------------EEEecCCCcC-----------CcC------------------
Confidence 222111110 0011100 00 011
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
.+.+++.+. .++++|++..+ .|...+ +++|+++|++||+++|+|++|+ +|.. +.....|.
T Consensus 96 ~~~l~~~i~--------~~~~~v~~~~~----~G~~~~----~~~i~~l~~~~~i~li~D~a~~-~g~~---~~~~~~~~ 155 (352)
T cd00616 96 PELIEAAIT--------PRTKAIIPVHL----YGNPAD----MDAIMAIAKRHGLPVIEDAAQA-LGAT---YKGRKVGT 155 (352)
T ss_pred HHHHHHhcC--------cCCeEEEEECC----CCCcCC----HHHHHHHHHHcCCeEEEECCCC-CCCe---ECCEEccc
Confidence 144555553 34677776654 344443 8999999999999999999995 4332 11122344
Q ss_pred CCcEEEec----ccccCCccccceeecc-hHHHhhccC--------------------ChH--------------H----
Q 003466 681 VPDIACYG----KLLTGGVIPLAATLAT-NAVFDSFVG--------------------DSK--------------L---- 717 (818)
Q Consensus 681 ~PDivtlg----KgLggGy~PlsAvl~~-~~i~~~l~~--------------------~~~--------------~---- 717 (818)
..|+.++| |.+++| +.|+++++ +++.+.+.. ... .
T Consensus 156 ~~d~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~ 233 (352)
T cd00616 156 FGDAGAFSFHPTKNLTTG--EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEI 233 (352)
T ss_pred CcceeEEcCCCCCCCccc--CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHH
Confidence 46888877 999655 45667665 455442210 000 0
Q ss_pred ------HHHHHHHHHHcCCCeeEE------EeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee----c----
Q 003466 718 ------WDLELIQQISSHRTVQRV------VALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP----L---- 777 (818)
Q Consensus 718 ------~~~~l~~~l~~~~~v~~v------rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p----~---- 777 (818)
..+.+.+.|+..+.+.-+ .....++.+.+... .......+.+.|.++||.++. .
T Consensus 234 ~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~ 307 (352)
T cd00616 234 IARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE------AGESRDELIEALKEAGIETRVHYPPLHHQP 307 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc------CCCCHHHHHHHHHHCCCCeeeecCccccCH
Confidence 001223344444432211 12334555555321 002355788899999997762 0
Q ss_pred --------------------CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 778 --------------------GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 778 --------------------g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
...+|+.+....|++||++++++|+
T Consensus 308 ~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 308 PYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred hhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1467887788899999999998873
No 159
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.20 E-value=4.4e-09 Score=119.49 Aligned_cols=207 Identities=12% Similarity=0.047 Sum_probs=123.7
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCC-------ChhHHHHHHHHHhccCCCCCCcEEEeCChhH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENV-------YEPALECAELLLQGVGKGWASRAYFSDNGST 472 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~-------~~~~~eLae~L~~~~~~~~l~~v~f~~SGse 472 (818)
-|||..+ .+-- ++.|.+|+.+.++...... .... .+...++.++|+++++.+ .+.++|+++|++
T Consensus 5 ~yld~aa------~~~~-~~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~~~g~t~ 75 (402)
T TIGR02006 5 IYLDYAA------TTPV-DPRVAEKMMPYLTEKFGNP-ASRSHSFGWEAEEAVENARNQVAELIGAD-SREIVFTSGATE 75 (402)
T ss_pred EEeeCCc------CCCC-CHHHHHHHHHHHHhcCCCC-ChhhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHH
Confidence 6888765 3445 8999999988775432111 1111 134556677888888743 357999999999
Q ss_pred HHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCc
Q 003466 473 AIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPT 552 (818)
Q Consensus 473 A~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~ 552 (818)
|+..+++.+ ..+....| ..||+. ...|.+...+....... |.
T Consensus 76 a~~~~l~~l-~~~~~~~g----------------~~Vi~~-~~~h~s~~~~~~~~~~~--------------g~------ 117 (402)
T TIGR02006 76 SNNLAIKGI-AHFYKSKG----------------NHIITS-KTEHKAVLDTCRYLERE--------------GF------ 117 (402)
T ss_pred HHHHHHHHH-HHhhcCCC----------------CEEEEC-CCccHHHHHHHHHHHhc--------------CC------
Confidence 999999876 32211111 244444 45566544332211000 00
Q ss_pred ccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccC
Q 003466 553 VFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAA 632 (818)
Q Consensus 553 ~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~ 632 (818)
....++..... ..| .+.+++.+. +++.+|++..+ ++.
T Consensus 118 -----~v~~v~~~~~~-----------~~d------------------~~~l~~~l~--------~~~~lv~v~~~-~n~ 154 (402)
T TIGR02006 118 -----EVTYLPPKSNG-----------LID------------------LEELKAAIR--------DDTILVSIMHV-NNE 154 (402)
T ss_pred -----EEEEEccCCCC-----------cCC------------------HHHHHHhcC--------CCCEEEEEECC-CcC
Confidence 00011111000 001 145555553 24578888886 888
Q ss_pred CCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHH
Q 003466 633 GGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAV 707 (818)
Q Consensus 633 gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i 707 (818)
.|.+.+ +++|.++|++||+++|+|++|+ +|... .+..+..+|+++++ |.+|. ..+|+++++++.
T Consensus 155 tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~~----~~~~~~~~D~~~~s~~K~~gp--~G~G~l~~~~~~ 220 (402)
T TIGR02006 155 IGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKIP----INVNELKVDLMSISGHKIYGP--KGIGALYVRRKP 220 (402)
T ss_pred ceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCcc----cCccccCCCEEEEehhhhcCC--CceEEEEEccCC
Confidence 898886 8999999999999999999994 54331 12224568999999 96542 237777777643
No 160
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.20 E-value=4e-10 Score=126.64 Aligned_cols=171 Identities=13% Similarity=0.058 Sum_probs=111.8
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.+++++||++|+..+++... ..| ..|++....||+.
T Consensus 37 ~~~p~~~~le~~la~l~g~---~~a~~~~sG~~Ai~~~l~~l~-----~~g----------------d~Vl~~~~~y~~~ 92 (369)
T cd00614 37 IGNPTVDALEKKLAALEGG---EAALAFSSGMAAISTVLLALL-----KAG----------------DHVVASDDLYGGT 92 (369)
T ss_pred CCChhHHHHHHHHHHHHCC---CCEEEEcCHHHHHHHHHHHHc-----CCC----------------CEEEECCCCcchH
Confidence 4578899999999999873 678888999999999998761 122 2577777777663
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
. ..+.... . . .|.. ...++ ++|
T Consensus 93 ~-~~~~~~~-~--~----------~g~~-------------~~~v~--------------~~d----------------- 114 (369)
T cd00614 93 Y-RLFERLL-P--K----------LGIE-------------VTFVD--------------PDD----------------- 114 (369)
T ss_pred H-HHHHHHH-h--h----------cCeE-------------EEEeC--------------CCC-----------------
Confidence 2 2111000 0 0 0000 00000 111
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .++.+|++|.+ ++..|.+.+ +++|.++|++||+++|+||++. .+... ....
T Consensus 115 -~~~l~~~i~--------~~~~~v~~e~~-~np~g~~~d----l~~i~~la~~~g~~livD~t~~-~~~~~-----~~~~ 174 (369)
T cd00614 115 -PEALEAAIK--------PETKLVYVESP-TNPTLKVVD----IEAIAELAHEHGALLVVDNTFA-TPYLQ-----RPLE 174 (369)
T ss_pred -HHHHHHhcC--------CCCeEEEEECC-CCCCCeecC----HHHHHHHHHHcCCEEEEECCCc-chhcC-----Chhh
Confidence 144555553 25779999997 888888776 8999999999999999999984 32221 1123
Q ss_pred CCCcEE--EecccccC-Cccccceeecch-HHHhhcc
Q 003466 680 CVPDIA--CYGKLLTG-GVIPLAATLATN-AVFDSFV 712 (818)
Q Consensus 680 v~PDiv--tlgKgLgg-Gy~PlsAvl~~~-~i~~~l~ 712 (818)
..+|++ +++|.++| |-...|++++++ ++++.+.
T Consensus 175 ~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~ 211 (369)
T cd00614 175 LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLR 211 (369)
T ss_pred hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHH
Confidence 346877 78999986 324678888877 7766554
No 161
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.20 E-value=4.8e-09 Score=118.59 Aligned_cols=288 Identities=11% Similarity=0.034 Sum_probs=167.6
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCC-----CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPEN-----VYEPALECAELLLQGVGKGWASRAYFSDNGSTAI 474 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~-----~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~ 474 (818)
.|+|..+ .|.- ++.+.+|+.+.+..........+ ..+...++.+.++++++.. .+.++|++++++++
T Consensus 19 ~yl~~~~------~~~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~-~~~v~~~~~~t~~l 90 (397)
T TIGR01976 19 VFFDNPA------GTQI-PQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNAD-PPEVVFGANATSLT 90 (397)
T ss_pred EEecCCc------cCCC-CHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCC-CCeEEEeCCHHHHH
Confidence 6777554 4555 88999999998875432110011 1244678889999988743 24699999999988
Q ss_pred HHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccc----cccCCCCCCCcCCCCcccCCCcccCC
Q 003466 475 EIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAM----EAQAPSPYTGFLQQPWYSGRGLFLDP 550 (818)
Q Consensus 475 e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~al----s~tg~~~~~~~~~~p~~~~~~~~~~~ 550 (818)
..++... ... ..+| .+|+..+..|++. .... ...|...
T Consensus 91 ~~~~~~~-~~~-~~~g----------------d~vl~~~~~~~s~-~~~~~~~~~~~g~~~------------------- 132 (397)
T TIGR01976 91 FLLSRAI-SRR-WGPG----------------DEVIVTRLDHEAN-ISPWLQAAERAGAKV------------------- 132 (397)
T ss_pred HHHHHHH-Hhc-CCCC----------------CEEEEcCCchHhH-HHHHHHHHHhcCCEE-------------------
Confidence 7666544 111 1111 2566666555442 2111 1111110
Q ss_pred CcccccCcceeecCcc-hhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEcccc
Q 003466 551 PTVFMYNSKWILSLPE-WLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVV 629 (818)
Q Consensus 551 p~~~~~~~~~~v~~P~-~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~ 629 (818)
..++.+. .+ ..| .+.+++.+. +++.+|+++-+
T Consensus 133 ---------~~~~~~~~~~-----------~~~------------------~~~l~~~i~--------~~~~lv~i~~~- 165 (397)
T TIGR01976 133 ---------KWARVDEATG-----------ELH------------------PDDLASLLS--------PRTRLVAVTAA- 165 (397)
T ss_pred ---------EEEeccccCC-----------CcC------------------HHHHHHhcC--------CCceEEEEeCC-
Confidence 0011100 00 001 245665553 24567777765
Q ss_pred ccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCccccceeecchHH
Q 003466 630 HAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNAV 707 (818)
Q Consensus 630 ~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~i 707 (818)
.+..|.+.+ +++|.++|++||+++|+||+|. +| .+. ..... ..+|++ ++.|.+| .++|.+++++++
T Consensus 166 ~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~-~~~-~~~~~--~~~d~~~~s~~K~~g---~~~G~l~~~~~~ 233 (397)
T TIGR01976 166 SNTLGSIVD----LAAITELVHAAGALVVVDAVHY-AP-HGL-IDVQA--TGADFLTCSAYKFFG---PHMGILWGRPEL 233 (397)
T ss_pred CCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-cc-ccC-CCHHH--cCCCEEEEechhhcC---CceEEEEEcHHH
Confidence 777888876 9999999999999999999994 32 111 11122 246876 6789874 357888899988
Q ss_pred HhhccCCh----------------H-------------HHH-----------------------------HHHHHHHHcC
Q 003466 708 FDSFVGDS----------------K-------------LWD-----------------------------LELIQQISSH 729 (818)
Q Consensus 708 ~~~l~~~~----------------~-------------~~~-----------------------------~~l~~~l~~~ 729 (818)
++.+.... . .+. +.+.+.+++.
T Consensus 234 ~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~ 313 (397)
T TIGR01976 234 LMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDL 313 (397)
T ss_pred HhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 76543210 0 010 0111223333
Q ss_pred CCeeEEE-----eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec----------------CCEEEEECCCC
Q 003466 730 RTVQRVV-----ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL----------------GNVIYLMCGPC 788 (818)
Q Consensus 730 ~~v~~vr-----g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~----------------g~~ir~~ppl~ 788 (818)
+.+.-+. ..+.++.+.+.. ..+..+.++|.++||+++.+ +..+|+++...
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 384 (397)
T TIGR01976 314 PGVTLYGVARLAARVPTVSFTVHG---------LPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHY 384 (397)
T ss_pred CCEEEeCCCCccCCCceEEEEeCC---------cCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeecc
Confidence 3221111 122344443321 12456888999999999853 35799999999
Q ss_pred ChHHHHHHHHHHH
Q 003466 789 SSPEVCSQLLLKL 801 (818)
Q Consensus 789 ~t~edId~~~~~l 801 (818)
+|++|+++++++|
T Consensus 385 ~t~~di~~l~~~l 397 (397)
T TIGR01976 385 NTAEEVDRLLEAL 397 (397)
T ss_pred CCHHHHHHHHHhC
Confidence 9999999999864
No 162
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.20 E-value=6.7e-09 Score=116.59 Aligned_cols=301 Identities=14% Similarity=0.111 Sum_probs=161.7
Q ss_pred ceeecccccccccCCCC-CCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHH
Q 003466 400 QQFDACASWWTQGPDAT-LQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIAL 478 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~-~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~AL 478 (818)
.+|++++-. .++|-+ ..+++++|+++.++.+. ...+...+++++++++++. +.++++++|++|+..|+
T Consensus 9 ~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~~------~~~~~~~~~~~~~a~~~g~---~~~~~~~g~t~al~~al 77 (363)
T TIGR01437 9 KVINASGKM--TILGVSTVSDEVADAQKRGAQNYF------EIKELVNKTGEYIANLLGV---EDAVIVSSASAGIAQSV 77 (363)
T ss_pred eEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHHhhCC---CeEEEEcCHHHHHHHHH
Confidence 455555443 345522 17889999999876542 2356788999999999874 58899999999999999
Q ss_pred HHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC--c-cccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 479 KMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD--T-LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 479 klA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~--t-~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
+.+. ..|+-.=. ..-+...-....||.....|.-. + ..++.++|.
T Consensus 78 ~al~-----~~Gd~~~~-~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~-------------------------- 125 (363)
T TIGR01437 78 AAVI-----TRGNRYLV-ENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGG-------------------------- 125 (363)
T ss_pred HHHh-----cCCCcchh-hcccccccccceEEEECccchhcCCchHHHHHhcCC--------------------------
Confidence 9762 12210000 00000000011333333222110 0 001111110
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEE-EccccccCCC
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALI-IEPVVHAAGG 634 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVI-vEPV~~g~gG 634 (818)
..+.++..+ ..| .+.+++.|. ++..+++ +..- .+..|
T Consensus 126 ----~~v~v~~~~-----------~~d------------------~~~le~ai~--------~~t~ai~~v~~~-~~~~g 163 (363)
T TIGR01437 126 ----KVVEAGYAN-----------ECS------------------AEQLEAAIT--------EKTAAILYIKSH-HCVQK 163 (363)
T ss_pred ----eEEEEcCCC-----------CCC------------------HHHHHHhcC--------hhceEEEEEecC-CCCcC
Confidence 000000000 001 256677664 2333444 4432 23345
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHHHhhcc
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSFV 712 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l~ 712 (818)
.+.+ +++|.++|++||+++|+|++|. . .. .....+| .|++++| |.|+|. ..|++++++++++.+.
T Consensus 164 ~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~~--~~~~~~g--~D~~~~S~~K~l~gp--~~G~l~~~~~~i~~~~ 230 (363)
T TIGR01437 164 SMLS----VEDAAQVAQEHNLPLIVDAAAE-E--DL--QKYYRLG--ADLVIYSGAKAIEGP--TSGLVLGKKKYIEWVK 230 (363)
T ss_pred CcCC----HHHHHHHHHHcCCeEEEECCCC-C--ch--HHHHHcC--CCEEEEeCCcccCCC--ceEEEEEcHHHHHHHH
Confidence 5554 7899999999999999999995 2 11 1111234 4888655 988764 3777888877776531
Q ss_pred C---C-hH-----------------H--------H------HHHHHHHHHcCCCeeEEE--e-eee---EEEEEEecCcc
Q 003466 713 G---D-SK-----------------L--------W------DLELIQQISSHRTVQRVV--A-LGT---LCAIELQAAGC 751 (818)
Q Consensus 713 ~---~-~~-----------------~--------~------~~~l~~~l~~~~~v~~vr--g-~Gl---~~~iel~~~~~ 751 (818)
. . .. . + .+.+.+.|++.+.+.-.. . .+. ...+.+....
T Consensus 231 ~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~- 309 (363)
T TIGR01437 231 LQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESE- 309 (363)
T ss_pred hccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccC-
Confidence 1 1 00 0 0 012344455555432221 1 111 1223333210
Q ss_pred cCCCchHHHHHHHHHHHhCC--ceEee---cCCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 752 NAGYGSLYAASLLKKLREDG--VYMRP---LGNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 752 ~~~~~~~~a~~~~~~l~e~G--vlv~p---~g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
. .....++.+.|.++| |++++ ..+.+++.|.. .+++|++.++++|.+.
T Consensus 310 -~---g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 310 -L---GMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred -C---CCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 0 012567888898877 78875 23688888885 6699999999999875
No 163
>PRK07324 transaminase; Validated
Probab=99.19 E-value=1.7e-09 Score=121.68 Aligned_cols=177 Identities=20% Similarity=0.186 Sum_probs=112.3
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch-hcccCCCCcEEEeccccc-CCcc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT-ADLLGCVPDIACYGKLLT-GGVI 696 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a-~e~~gv~PDivtlgKgLg-gGy~ 696 (818)
++.+|++... ++..|.+. +++.+++|.++|++||+++|+||++.++...++... .+.++-.--+.+|||.+| .| +
T Consensus 153 ~~kli~i~~p-~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G-~ 229 (373)
T PRK07324 153 NTKLICINNA-NNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPG-I 229 (373)
T ss_pred CCcEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCcc-c
Confidence 3456666543 67777666 789999999999999999999999988754443211 111111112348999998 67 7
Q ss_pred ccceeecchHHHhhccCCh--------H--------H-------HH----------HHHHHHHHcCCCeeEEEeeeeEEE
Q 003466 697 PLAATLATNAVFDSFVGDS--------K--------L-------WD----------LELIQQISSHRTVQRVVALGTLCA 743 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~~~--------~--------~-------~~----------~~l~~~l~~~~~v~~vrg~Gl~~~ 743 (818)
.+|.+++++++++.+.... . . +. +.+.+.++.++.+..+...|.+..
T Consensus 230 RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~ 309 (373)
T PRK07324 230 RVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTS 309 (373)
T ss_pred eeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEE
Confidence 8999999988877553210 0 0 00 011222344555544555554332
Q ss_pred -EEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 744 -IELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 744 -iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+.+... .....++++|+ ++||++.|+ .+.+|+... .+++.+++.+++|.+.+++.
T Consensus 310 ~i~~~~~--------~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~--~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 310 FVKLDVD--------MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYC--CDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred EEEeCCC--------CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 333211 12456788875 779999984 257777754 56899999999999988653
No 164
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.19 E-value=5.3e-09 Score=117.15 Aligned_cols=279 Identities=15% Similarity=0.107 Sum_probs=158.2
Q ss_pred CHHHHHHHHHhhhhcc-cccCCCCC-----ChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccc
Q 003466 418 QIELARDMGYTAARFG-HVMFPENV-----YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEV 491 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~-~~~~~~~~-----~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~ 491 (818)
.+.+.+|+.+.++++. ......+. .+...++.+.|+++++....+.++|+++|++|+..++... . +.|
T Consensus 13 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~---~--~~g- 86 (376)
T TIGR01977 13 PDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL---L--KEG- 86 (376)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc---c--CCC-
Confidence 5789999998887753 11111111 2556788889999887432247999999999998887643 1 111
Q ss_pred cccccCCCccccccceEEEEEcCCCCCCcccccc-cc---CCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcch
Q 003466 492 LVDFLGKDTTEKCIELKVLALKGSYHGDTLGAME-AQ---APSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEW 567 (818)
Q Consensus 492 ~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als-~t---g~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~ 567 (818)
..|++...+ |++....+. +. |.. ...++....
T Consensus 87 ---------------d~vl~~~~~-~~~~~~~~~~~~~~~g~~----------------------------~~~v~~~~~ 122 (376)
T TIGR01977 87 ---------------DHVITTPME-HNSVARPLECLKEQIGVE----------------------------ITIVKCDNE 122 (376)
T ss_pred ---------------CEEEECcch-hhHHHHHHHHHHHHcCcE----------------------------EEEEecCCC
Confidence 256655444 443322111 00 100 000110000
Q ss_pred hhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHH
Q 003466 568 LYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILV 647 (818)
Q Consensus 568 ~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~Lr 647 (818)
+ +.| .+.+++.+. .++++|++..+ ++..|.+.+ +++|.
T Consensus 123 ~-----------~~d------------------~~~l~~~~~--------~~~~~v~~~~~-~n~tG~~~~----~~~i~ 160 (376)
T TIGR01977 123 G-----------LIS------------------PERIKRAIK--------TNTKLIVVSHA-SNVTGTILP----IEEIG 160 (376)
T ss_pred C-----------CcC------------------HHHHHHhcC--------CCCeEEEEECC-CCCccccCC----HHHHH
Confidence 0 111 144555553 24567777765 788888886 88999
Q ss_pred HHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHH-HhhccC-----------
Q 003466 648 KECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAV-FDSFVG----------- 713 (818)
Q Consensus 648 eLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i-~~~l~~----------- 713 (818)
++|+++|+++|+|++| ++|...- ..+. ..+|+++++ |.++|. -..|++..+++. +..+..
T Consensus 161 ~l~~~~~~~livD~a~-~~g~~~~--~~~~--~~~D~~~~s~~K~l~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
T TIGR01977 161 ELAQENGIFFILDAAQ-TAGVIPI--DMTE--LAIDMLAFTGHKGLLGP-QGTGGLYIREGIKLKPLKSGGTGSHSALID 234 (376)
T ss_pred HHHHHcCCEEEEEhhh-ccCccCC--Cchh--cCCCEEEecccccccCC-CCceEEEEcCCcCcCceecCCCcccccccc
Confidence 9999999999999999 5654421 1122 246887655 888753 124455554442 111110
Q ss_pred -----------ChH-------------HH---------------HHHHHHHHHcCCCeeEE-----EeeeeEEEEEEecC
Q 003466 714 -----------DSK-------------LW---------------DLELIQQISSHRTVQRV-----VALGTLCAIELQAA 749 (818)
Q Consensus 714 -----------~~~-------------~~---------------~~~l~~~l~~~~~v~~v-----rg~Gl~~~iel~~~ 749 (818)
+.. .+ .+.+.+.+.+.+.+.-+ ...+.++.+.+...
T Consensus 235 ~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 314 (376)
T TIGR01977 235 QPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI 314 (376)
T ss_pred ccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC
Confidence 000 00 01123334434432111 11244555555311
Q ss_pred cccCCCchHHHHHHHHHHHhC-CceEeec---------------CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 750 GCNAGYGSLYAASLLKKLRED-GVYMRPL---------------GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 750 ~~~~~~~~~~a~~~~~~l~e~-Gvlv~p~---------------g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
....+.+.|.++ ||.++.+ ...+|+.+...+|++||++++++|++
T Consensus 315 ---------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 315 ---------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ---------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 245678888887 8888642 26899999999999999999999865
No 165
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.18 E-value=1.1e-08 Score=116.52 Aligned_cols=318 Identities=14% Similarity=0.097 Sum_probs=187.5
Q ss_pred cCccccceeecccccccccCCCCCCHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-CC-CcEEEeCC
Q 003466 394 KNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-WA-SRAYFSDN 469 (818)
Q Consensus 394 G~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~l-~~v~f~~S 469 (818)
|.++.+..+|+..|.-+ .++ - +|.+.+++.+.+.+... +....+..+....+++.+.+..+.. .- +.++++++
T Consensus 34 ~~~~~~~~i~l~~g~~~-~~~-p-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~G 110 (405)
T PRK06207 34 GEPLPGRPVDFSHGDVD-AHE-P-TPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPG 110 (405)
T ss_pred CCcCCCCceecCCcCCC-CCC-C-CHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCC
Confidence 44455577888765332 222 3 57889998887765321 1112344567778888888765531 12 57999999
Q ss_pred hhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccC
Q 003466 470 GSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLD 549 (818)
Q Consensus 470 GseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~ 549 (818)
+++|+..+++... ..| ..|++..-+|.+.... +...|...
T Consensus 111 a~~al~~~~~~l~-----~~G----------------d~Vlv~~P~y~~~~~~-~~~~g~~v------------------ 150 (405)
T PRK06207 111 TQGALFLAVAATV-----ARG----------------DKVAIVQPDYFANRKL-VEFFEGEM------------------ 150 (405)
T ss_pred cHHHHHHHHHHhc-----CCC----------------CEEEEeCCCchhHHHH-HHHcCCEE------------------
Confidence 9999998888651 222 3688888888764321 11212110
Q ss_pred CCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEE-EEEccc
Q 003466 550 PPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGA-LIIEPV 628 (818)
Q Consensus 550 ~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV 628 (818)
+++|-. +.+.+..+. -+ .+.|++.+.. ++.+ ++.-|
T Consensus 151 ------------~~v~~~------------~~~~~~~~~--~d--------~~~l~~~~~~--------~~k~v~l~~P- 187 (405)
T PRK06207 151 ------------VPVQLD------------YLSADKRAG--LD--------LDQLEEAFKA--------GVRVFLFSNP- 187 (405)
T ss_pred ------------EEEecc------------ccCcccCCC--cC--------HHHHHHhhhh--------cCeEEEECCC-
Confidence 011100 000000000 00 1455655541 2334 45556
Q ss_pred cccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCc----EEEeccccc-CCccccceee
Q 003466 629 VHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPD----IACYGKLLT-GGVIPLAATL 702 (818)
Q Consensus 629 ~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PD----ivtlgKgLg-gGy~PlsAvl 702 (818)
++-.|.+. +.+-+++|.++|++||+++|.||++.-|--.|..+ ....+...+| +.+|||.++ .| +-+|.++
T Consensus 188 -~NPTG~~~-s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpG-lRiG~ii 264 (405)
T PRK06207 188 -NNPAGVVY-SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSG-YRLGVAF 264 (405)
T ss_pred -CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcc-cceEEEE
Confidence 67778777 78899999999999999999999998763334321 1111222334 226899998 77 7999999
Q ss_pred cchHHHhhccCChH----------------HHH-----------------HHHHHHHHcCCCeeEEEe-eeeEEEEEEec
Q 003466 703 ATNAVFDSFVGDSK----------------LWD-----------------LELIQQISSHRTVQRVVA-LGTLCAIELQA 748 (818)
Q Consensus 703 ~~~~i~~~l~~~~~----------------~~~-----------------~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~ 748 (818)
+++++++.+..... .+. +.+.+.+++++.+.-... .|.++-+.+..
T Consensus 265 ~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~ 344 (405)
T PRK06207 265 GSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPR 344 (405)
T ss_pred cCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcc
Confidence 99988776532100 111 112233444433322223 35566566542
Q ss_pred CcccCCCchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 749 AGCNAGYGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 749 ~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
.. ..+..+++.|+ ++||.+.|+ .+.+|++... +++++++.+++|.+++++++
T Consensus 345 ~~-------~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 345 LA-------VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred cC-------CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhh
Confidence 10 12456888887 689999973 2568887763 68999999999999887653
No 166
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.18 E-value=1e-08 Score=116.58 Aligned_cols=299 Identities=10% Similarity=-0.021 Sum_probs=170.9
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCC------CChhHHHHHHHHHhccCCCCCCcEEEeCChhHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPEN------VYEPALECAELLLQGVGKGWASRAYFSDNGSTA 473 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~------~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA 473 (818)
-|||..+ .|.- .+.+.+|+.+.+.........+. ..+...++.++|+++++....+.++|+++++++
T Consensus 25 iYld~a~------~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~ 97 (406)
T PRK09295 25 AYLDSAA------SAQK-PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEG 97 (406)
T ss_pred EEEeCcc------cccC-CHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHH
Confidence 6888665 4445 78899999887765321110011 124455677788888764213689999999999
Q ss_pred HHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcc
Q 003466 474 IEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTV 553 (818)
Q Consensus 474 ~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~ 553 (818)
+..+++.. ....-+.| ..||+.+..||+....-..+.. ..|.
T Consensus 98 l~~~~~~~-~~~~~~~g----------------d~vl~~~~~~~s~~~~~~~~~~--------------~~g~------- 139 (406)
T PRK09295 98 INLVANSW-GNSNVRAG----------------DNIIISEMEHHANIVPWQMLCA--------------RVGA------- 139 (406)
T ss_pred HHHHHHHh-hhhcCCCc----------------CEEEECcchhhHHHHHHHHHHH--------------HcCc-------
Confidence 98888753 11011111 3677777777663211111100 0000
Q ss_pred cccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCC
Q 003466 554 FMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAG 633 (818)
Q Consensus 554 ~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~g 633 (818)
....++.+... ..| .+.+++.+. .++.+|++.-+ +...
T Consensus 140 ----~v~~v~~~~~~-----------~~d------------------~~~l~~~i~--------~~t~lv~l~~~-~n~t 177 (406)
T PRK09295 140 ----ELRVIPLNPDG-----------TLQ------------------LETLPALFD--------ERTRLLAITHV-SNVL 177 (406)
T ss_pred ----EEEEEecCCCC-----------CCC------------------HHHHHHhcC--------CCcEEEEEecc-hhcc
Confidence 00011111000 001 145555553 24566666665 7888
Q ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHHHhhc
Q 003466 634 GMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSF 711 (818)
Q Consensus 634 G~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l 711 (818)
|.+.+ +++|.++|+++|+++|+|++| ++|..- .-.+ ...+|++++| |.+|- .-+|.+.+++++.+.+
T Consensus 178 G~~~~----~~~i~~~~~~~~~~vivD~a~-~~g~~~--~~~~--~~~~D~~~~s~~K~~gp--~G~G~l~~~~~~~~~~ 246 (406)
T PRK09295 178 GTENP----LAEMIALAHQHGAKVLVDGAQ-AVMHHP--VDVQ--ALDCDFYVFSGHKLYGP--TGIGILYVKEALLQEM 246 (406)
T ss_pred cccCC----HHHHHHHHHHcCCEEEEEccc-ccCccc--cCch--hcCCCEEEeehhhccCC--CCcEEEEEchHhHhhC
Confidence 98886 899999999999999999999 454331 1112 2347898777 95541 1257788888775432
Q ss_pred c----------------------------CChH-------------HH---------------HHHHHHHHHcCCCeeEE
Q 003466 712 V----------------------------GDSK-------------LW---------------DLELIQQISSHRTVQRV 735 (818)
Q Consensus 712 ~----------------------------~~~~-------------~~---------------~~~l~~~l~~~~~v~~v 735 (818)
. .+.. .+ .+.+.+.+...+.+.-+
T Consensus 247 ~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~ 326 (406)
T PRK09295 247 PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLY 326 (406)
T ss_pred CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 1 0000 00 01123334444433211
Q ss_pred E--eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------------CCEEEEECCCCChHHHHHHHHHH
Q 003466 736 V--ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------------GNVIYLMCGPCSSPEVCSQLLLK 800 (818)
Q Consensus 736 r--g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------------g~~ir~~ppl~~t~edId~~~~~ 800 (818)
. ..+.++.+.+... ....+.+.|.++||.++.+ ...+|+++....|++|||+++++
T Consensus 327 ~~~~~~~iv~~~~~~~---------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~ 397 (406)
T PRK09295 327 GPQNRLGVIAFNLGKH---------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAG 397 (406)
T ss_pred CCCCCceEEEEEECCc---------CHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHH
Confidence 0 1233555544321 1345677788999999742 14799999999999999999999
Q ss_pred HHHHH
Q 003466 801 LYQRL 805 (818)
Q Consensus 801 l~~~l 805 (818)
|++..
T Consensus 398 l~~i~ 402 (406)
T PRK09295 398 LQRIH 402 (406)
T ss_pred HHHHH
Confidence 98764
No 167
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.16 E-value=3.7e-09 Score=122.41 Aligned_cols=180 Identities=11% Similarity=0.011 Sum_probs=102.2
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALII-EPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
+.+++.+.+ .. ...||+ |.+ .++- .+ +++|+++|++||++|++|++| ++|-.|..+....++
T Consensus 173 d~Le~~l~~-----~~--pklIv~~~S~-~s~~---~D----~a~i~~ia~~~ga~LlvD~AH-~~Gli~~~~~~~p~~- 235 (475)
T PLN03226 173 DKLEKKAML-----FR--PKLIIAGASA-YPRD---WD----YARMRKIADKVGALLMCDMAH-ISGLVAAQEAASPFE- 235 (475)
T ss_pred HHHHHHHhh-----cC--CeEEEEecCc-CCCc---cC----HHHHHHHHHHcCCEEEEEchh-hhCcccCCCCCCCCC-
Confidence 567777753 12 223444 776 4433 32 779999999999999999999 566666543222222
Q ss_pred CCcEE--EecccccCCccccceeecchHHH-----------hh--ccCC--------hH-------------H-------
Q 003466 681 VPDIA--CYGKLLTGGVIPLAATLATNAVF-----------DS--FVGD--------SK-------------L------- 717 (818)
Q Consensus 681 ~PDiv--tlgKgLggGy~PlsAvl~~~~i~-----------~~--l~~~--------~~-------------~------- 717 (818)
..|++ |+.|+|.|- +-|.+++++++. ++ ..+. +. .
T Consensus 236 ~~Div~~t~hK~L~GP--~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~ 313 (475)
T PLN03226 236 YCDVVTTTTHKSLRGP--RGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFK 313 (475)
T ss_pred CCeEEEecCcccccCC--CceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHH
Confidence 46876 677999652 123356666433 22 1111 10 0
Q ss_pred -HHH-------HHHHHHHcCCCeeEEEe--eeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec----------
Q 003466 718 -WDL-------ELIQQISSHRTVQRVVA--LGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL---------- 777 (818)
Q Consensus 718 -~~~-------~l~~~l~~~~~v~~vrg--~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~---------- 777 (818)
+.+ .+.+.+.+.+. .-+.+ ...+..+++.... .....+.+.|.+.||++..+
T Consensus 314 ~~~~~~~~na~~L~~~L~~~G~-~l~~~~t~~hi~lv~~~~~g-------i~~~~~~~~L~~~~I~~nk~~~p~~~~~~~ 385 (475)
T PLN03226 314 AYQKQVKANAAALANRLMSKGY-KLVTGGTDNHLVLWDLRPLG-------LTGSRVEKVLDLAHITLNKNAVPGDSSALV 385 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-EEEcCCCCCCEEEEEccCCC-------CCHHHHHHHHHHCCCEECCCCCCCCcccCC
Confidence 111 12233333222 11111 1234444543221 12445677788899998642
Q ss_pred CCEEEE----ECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 778 GNVIYL----MCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 778 g~~ir~----~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
...+|+ .....++++|++++.+.|.++++..
T Consensus 386 ~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 386 PGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIA 420 (475)
T ss_pred CCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 245777 4556788999999999999999843
No 168
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.15 E-value=3.4e-09 Score=117.21 Aligned_cols=285 Identities=14% Similarity=0.020 Sum_probs=151.3
Q ss_pred CChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 441 VYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 441 ~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..+...+++++++++++.+ .-..++|+++|++|+..|+..++..+..+... ....++...+|.....+|.+
T Consensus 36 ~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~--------~~~~~~~~~~v~~~~~~h~~ 107 (345)
T cd06450 36 ATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKA--------GGGRGIDKLVIVCSDQAHVS 107 (345)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhc--------ccccccCCeEEEEcCcchhH
Confidence 3455666777777777642 12468999999999999999883222110000 00001123467777778876
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
...++...|.... .++..... ..|
T Consensus 108 ~~~~~~~~g~~~~----------------------------~v~~~~~~-----------~~d----------------- 131 (345)
T cd06450 108 VEKAAAYLDVKVR----------------------------LVPVDEDG-----------RMD----------------- 131 (345)
T ss_pred HHHHHHHHhcCeE----------------------------EeeeCCCC-----------CcC-----------------
Confidence 5444333222110 01100000 011
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEE-EEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGA-LIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL 678 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~ 678 (818)
.+.|++.+.+.. ....+..+ ++..| ....|.+.+ +++|.++|++||+++++|+++.++.-..........
T Consensus 132 -~~~l~~~i~~~~--~~~~~~~~v~~~~~--~~~tG~~~~----~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 202 (345)
T cd06450 132 -PEALEAAIDEDK--AEGLNPIMVVATAG--TTDTGAIDP----LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDF 202 (345)
T ss_pred -HHHHHHHHHHHH--HCCCCcEEEEEecc--cCCCCCCCC----HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhc
Confidence 144555554200 11223344 44555 455677654 899999999999999999999654211111110011
Q ss_pred CC-CCcEE--EecccccCCccccceeecc----hHHHhhccCChH--------HHHHHHHHHHHcCCCeeEEE-eeeeEE
Q 003466 679 GC-VPDIA--CYGKLLTGGVIPLAATLAT----NAVFDSFVGDSK--------LWDLELIQQISSHRTVQRVV-ALGTLC 742 (818)
Q Consensus 679 gv-~PDiv--tlgKgLggGy~PlsAvl~~----~~i~~~l~~~~~--------~~~~~l~~~l~~~~~v~~vr-g~Gl~~ 742 (818)
++ ..|.+ ++.|.++++ ...|+++.+ ...++.+..... .+.+.+.+.+++.+.+.-+. ..+.++
T Consensus 203 ~~~~~d~~~~s~~K~l~~p-~g~g~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv 281 (345)
T cd06450 203 GIERVDSISVDPHKYGLVP-LGCSAVLVRALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLV 281 (345)
T ss_pred CccccCEEEEchhHhhCCC-cchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEE
Confidence 11 35744 688988765 355555444 011111111110 22234455566665442221 234455
Q ss_pred EEEEecCcccCCCchHHHHHHHHHHHhCCceEee-----cCCEEEEECCCCC-hHHHHHHHHHHHHH
Q 003466 743 AIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP-----LGNVIYLMCGPCS-SPEVCSQLLLKLYQ 803 (818)
Q Consensus 743 ~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p-----~g~~ir~~ppl~~-t~edId~~~~~l~~ 803 (818)
.+.+.... -....+..+.++|.++|+++.+ .+..+|+.+...+ |++|+|++++.|++
T Consensus 282 ~f~~~~~~----~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 282 CFRLKPSV----KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEECCcc----hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 56554310 0012356788999999655443 1368999998765 99999999999865
No 169
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.15 E-value=1.1e-09 Score=123.50 Aligned_cols=172 Identities=16% Similarity=0.115 Sum_probs=108.8
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
.+.++...+|+++|+++.+. +.+++++||++|+..+++... +.| .+||+. ..+||
T Consensus 50 r~~~p~~~~le~~la~l~g~---~~~~~~~sG~~Ai~~al~al~-----~~G----------------d~Vl~~-~~~~~ 104 (380)
T TIGR01325 50 RYANPTVAAFEERIAALEGA---ERAVATATGMSAIQAALMTLL-----QAG----------------DHVVAS-RSLFG 104 (380)
T ss_pred cCCCchHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHHHHh-----CCC----------------CEEEEe-cCCcc
Confidence 34577789999999998873 678899999999999997541 112 245554 55667
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
.+...+.-. ....+. ...+++ .+|
T Consensus 105 ~t~~~~~~~-------------~~~~g~-----------~v~~v~----------------~~d---------------- 128 (380)
T TIGR01325 105 STVGFISEI-------------LPRFGI-----------EVSFVD----------------PTD---------------- 128 (380)
T ss_pred hHHHHHHHH-------------HHHhCC-----------EEEEEC----------------CCC----------------
Confidence 654322110 000000 000000 111
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL 678 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~ 678 (818)
.+.+++.+. .++++|++|.. .+..|.+.+ +++|.++|+++|+++|+||+++.+ ... .-.
T Consensus 129 --~~~l~~~i~--------~~tklV~le~p-~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~-~~~-----~pl 187 (380)
T TIGR01325 129 --LNAWEAAVK--------PNTKLVFVETP-SNPLGELVD----IAALAELAHAIGALLVVDNVFATP-VLQ-----QPL 187 (380)
T ss_pred --HHHHHHhcC--------CCceEEEEECC-CCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-ccC-----Cch
Confidence 134555443 35689999986 777777665 899999999999999999998532 111 112
Q ss_pred CCCCcEEE--ecccccCCcccc-ceeecchHHHhhcc
Q 003466 679 GCVPDIAC--YGKLLTGGVIPL-AATLATNAVFDSFV 712 (818)
Q Consensus 679 gv~PDivt--lgKgLggGy~Pl-sAvl~~~~i~~~l~ 712 (818)
...+|+++ ++|.++|.-..+ |++++++++++.+.
T Consensus 188 ~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~ 224 (380)
T TIGR01325 188 KLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVA 224 (380)
T ss_pred hhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHH
Confidence 33478885 899998732344 67778888766554
No 170
>PRK08960 hypothetical protein; Provisional
Probab=99.14 E-value=1.8e-08 Score=113.83 Aligned_cols=289 Identities=14% Similarity=0.074 Sum_probs=169.0
Q ss_pred CHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccc
Q 003466 418 QIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDF 495 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~ 495 (818)
.+.+.+++.+.+.... .+....+..+....+++.+....+.+ ..+.+++++++++|...++.+. ...|
T Consensus 47 ~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~-----~~~g----- 116 (387)
T PRK08960 47 AEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLL-----VDPG----- 116 (387)
T ss_pred CHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHh-----cCCC-----
Confidence 6889999988776421 11112234455666777766532211 1368999999999999888755 1222
Q ss_pred cCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcccc
Q 003466 496 LGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEH 575 (818)
Q Consensus 496 ~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~ 575 (818)
..|++.+-+|.+...... ..|.. ...+++...
T Consensus 117 -----------d~vlv~~p~y~~~~~~~~-~~g~~----------------------------~~~v~~~~~-------- 148 (387)
T PRK08960 117 -----------KHWLLADPGYPCNRHFLR-LVEGA----------------------------AQLVPVGPD-------- 148 (387)
T ss_pred -----------CEEEEcCCCCcchHHHHH-hcCCe----------------------------EEEEecCcc--------
Confidence 368888888876442221 11111 001111000
Q ss_pred ccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCC
Q 003466 576 KDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKI 655 (818)
Q Consensus 576 ~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gi 655 (818)
++ |. .+ .+.+++.+. ......++..| ++-.|... +.+.+++|.++|++||+
T Consensus 149 -----~~----~~--~d--------~~~l~~~~~-------~~~~~i~i~~p--~NPtG~~~-~~~~~~~l~~~~~~~~~ 199 (387)
T PRK08960 149 -----SR----YQ--LT--------PALVERHWN-------ADTVGALVASP--ANPTGTLL-SRDELAALSQALRARGG 199 (387)
T ss_pred -----cC----CC--CC--------HHHHHHHhC-------ccceEEEEECC--CCCCCcCc-CHHHHHHHHHHHHHcCC
Confidence 00 00 00 144555554 23445667777 67788777 78899999999999999
Q ss_pred cEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCccccceeecchHHHhhccCC--------hH-------
Q 003466 656 PVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVIPLAATLATNAVFDSFVGD--------SK------- 716 (818)
Q Consensus 656 lLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~PlsAvl~~~~i~~~l~~~--------~~------- 716 (818)
++|+||++..|--.+... ....+.++++ +|||.+| .| +.+|.+++++++++.+... +.
T Consensus 200 ~li~De~Y~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~ 276 (387)
T PRK08960 200 HLVVDEIYHGLTYGVDAA--SVLEVDDDAFVLNSFSKYFGMTG-WRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAAL 276 (387)
T ss_pred EEEEEccccccccCCCCC--ChhhccCCEEEEeecccccCCcc-cEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHH
Confidence 999999998773222211 1233456665 5999997 67 7999999999887755321 00
Q ss_pred -HHH------------------HHHHHHHHcCCCeeEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEe
Q 003466 717 -LWD------------------LELIQQISSHRTVQRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMR 775 (818)
Q Consensus 717 -~~~------------------~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~ 775 (818)
.+. +.+.+.++.++....+. .-|.++-+++.... .....+++.|+ ++||++.
T Consensus 277 ~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~-------~~~~~~~~~ll~~~gi~v~ 349 (387)
T PRK08960 277 ACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFG-------GDAFAFCRHFLETEHVAFT 349 (387)
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccC-------CCHHHHHHHHHHhCCEEEc
Confidence 110 11223344454321122 23555555553210 11456777766 6899999
Q ss_pred ec--------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 776 PL--------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 776 p~--------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
|+ ++.+|++... +.+++.+++++|.+++
T Consensus 350 pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 350 PGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred CchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 73 2578888764 5677888887777655
No 171
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.13 E-value=1.4e-08 Score=115.75 Aligned_cols=179 Identities=10% Similarity=0.040 Sum_probs=101.7
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALII-EPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
+.+++.+.. .+..+|++ .++ .|...+ +++|.++|++||+++|+||+|. +|.++........+
T Consensus 155 ~~l~~~i~~-------~~~k~v~~~~~~----~~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~~~~- 217 (416)
T PRK00011 155 DEVEKLALE-------HKPKLIIAGASA----YSRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPSPVP- 217 (416)
T ss_pred HHHHHHHHh-------cCCCEEEECCCc----CCCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCCCCC-
Confidence 556666752 13344555 454 233333 8999999999999999999984 44343211111122
Q ss_pred CCcEE--EecccccCCccccceeecc-hHHHhhccCCh---------H------------HHH--------------HHH
Q 003466 681 VPDIA--CYGKLLTGGVIPLAATLAT-NAVFDSFVGDS---------K------------LWD--------------LEL 722 (818)
Q Consensus 681 ~PDiv--tlgKgLggGy~PlsAvl~~-~~i~~~l~~~~---------~------------~~~--------------~~l 722 (818)
..|++ +++|+++| .+.|+++++ +++.+.+.... . .+. +.+
T Consensus 218 ~~di~~~S~~K~l~g--~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l 295 (416)
T PRK00011 218 HADVVTTTTHKTLRG--PRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKAL 295 (416)
T ss_pred CCcEEEecCCcCCCC--CCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 35765 68999965 467778885 67766543110 0 000 112
Q ss_pred HHHHHcCCCeeEEE--eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee----c-------CCEEEEECC---
Q 003466 723 IQQISSHRTVQRVV--ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP----L-------GNVIYLMCG--- 786 (818)
Q Consensus 723 ~~~l~~~~~v~~vr--g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p----~-------g~~ir~~pp--- 786 (818)
.+.|+..+. .-.. ....++.+.+.+.. .....+.+.|.++||.++. . ...+|+...
T Consensus 296 ~~~L~~~g~-~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~ 367 (416)
T PRK00011 296 AEALAERGF-RVVSGGTDNHLVLVDLRSKG-------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAIT 367 (416)
T ss_pred HHHHHhCCC-eeeecCCCCeEEEEeCcccC-------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHh
Confidence 223333332 1111 11233334442210 1234577888899999972 1 245777432
Q ss_pred -CCChHHHHHHHHHHHHHHHHH
Q 003466 787 -PCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 787 -l~~t~edId~~~~~l~~~l~~ 807 (818)
..+|++|++++++.|++++..
T Consensus 368 ~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 368 TRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred hcCcCHHHHHHHHHHHHHHHhc
Confidence 257899999999999998776
No 172
>PRK07777 aminotransferase; Validated
Probab=99.12 E-value=1.7e-08 Score=113.89 Aligned_cols=305 Identities=12% Similarity=0.078 Sum_probs=170.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCCC-C-CcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKGW-A-SRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~~-l-~~v~f~~SGseA~e~ 476 (818)
..+|+..|.-. .. . ++.+.+++.+.+... ..+....+..+....+++.+.+..+... . +.++++++|++|+..
T Consensus 25 ~~i~l~~g~p~--~~-~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 100 (387)
T PRK07777 25 GAVNLGQGFPD--ED-G-PPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAA 100 (387)
T ss_pred CeEEccCCCCC--CC-C-CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH
Confidence 45666655422 11 2 567788877766532 1121122334555666666655444210 1 269999999999998
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
++... -..| ..|+....+|++.. .++...|...
T Consensus 101 ~~~~~-----~~~g----------------d~vli~~p~y~~~~-~~~~~~g~~~------------------------- 133 (387)
T PRK07777 101 AVLGL-----VEPG----------------DEVLLIEPYYDSYA-AVIAMAGAHR------------------------- 133 (387)
T ss_pred HHHHh-----cCCC----------------CEEEEeCCCchhhH-HHHHHCCCEE-------------------------
Confidence 88744 1112 36787777777643 2222222110
Q ss_pred CcceeecCcchhhhhccccccccc-cCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITF-CSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~-nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
+.+|..-. +-.| .| .+.+++.+. .++.+|++... ++..|.
T Consensus 134 -----~~~~~~~~-------~~~~~~d------------------~~~l~~~~~--------~~~~~v~l~~p-~NPtG~ 174 (387)
T PRK07777 134 -----VPVPLVPD-------GRGFALD------------------LDALRAAVT--------PRTRALIVNSP-HNPTGT 174 (387)
T ss_pred -----EEeecCCc-------cCCCcCC------------------HHHHHHhcC--------cccEEEEEcCC-CCCCCc
Confidence 00110000 0000 01 144555443 24567777764 788888
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc-chhccc-CCC-Cc--EEEeccccc-CCccccceeecchHHHh
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-TTADLL-GCV-PD--IACYGKLLT-GGVIPLAATLATNAVFD 709 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-~a~e~~-gv~-PD--ivtlgKgLg-gGy~PlsAvl~~~~i~~ 709 (818)
.. +.+.+++|.++|++||+++|+||++.+|.-.+.. .....+ +.. .+ +.++||.+| .| +.+|++++++++++
T Consensus 175 ~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~~ 252 (387)
T PRK07777 175 VL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTG-WKIGWACGPAPLIA 252 (387)
T ss_pred cC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcC-ceeEEEecCHHHHH
Confidence 66 7899999999999999999999999876322321 111111 211 12 337999998 67 79999999998876
Q ss_pred hccCCh--------H--------HH------H-----------HHHHHHHHcCCCeeEEEee-eeEEEEEEecCcccCCC
Q 003466 710 SFVGDS--------K--------LW------D-----------LELIQQISSHRTVQRVVAL-GTLCAIELQAAGCNAGY 755 (818)
Q Consensus 710 ~l~~~~--------~--------~~------~-----------~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~ 755 (818)
.+.... . .+ . +.+.+.++.++. .-.... |.++-+.+....
T Consensus 253 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~~~~~~~~~~----- 326 (387)
T PRK07777 253 AVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGF-EVHDSAGTYFLCADPRPLG----- 326 (387)
T ss_pred HHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCC-CccCCCcceEEEecccccC-----
Confidence 543210 0 00 0 112233333321 111122 333444543210
Q ss_pred chHHHHHHHHHHH-hCCceEeec----------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 756 GSLYAASLLKKLR-EDGVYMRPL----------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 756 ~~~~a~~~~~~l~-e~Gvlv~p~----------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
...+..+++.|+ ++||++.|+ .+.+|+... .+++++++.+++|.+..
T Consensus 327 -~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~--~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 327 -YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC--KRDDTLDEAIRRLRALR 384 (387)
T ss_pred -CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 012567888887 579999873 136788765 46899999999887654
No 173
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.12 E-value=2.7e-08 Score=114.16 Aligned_cols=182 Identities=15% Similarity=0.101 Sum_probs=115.2
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhc-CCcEEEeecccCcccCCccchhcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNR-KIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~-gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
+.+++.+.. ++.++++=|-.++-.|.+. +.+.+++|.++|++| ++++|.||++.-|...+..-... ..
T Consensus 202 ~~l~~~~~~--------~~k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~--~~ 270 (431)
T PRK15481 202 EKLERALAQ--------GARAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIP--QT 270 (431)
T ss_pred HHHHHHHhc--------CCCEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCc--CC
Confidence 456666641 3445555443478888877 789999999999999 99999999997663222110010 11
Q ss_pred CCcE---EEecccccCCccccceeecchHHHhhccCC--------hH--------HHH-------------------HHH
Q 003466 681 VPDI---ACYGKLLTGGVIPLAATLATNAVFDSFVGD--------SK--------LWD-------------------LEL 722 (818)
Q Consensus 681 ~PDi---vtlgKgLggGy~PlsAvl~~~~i~~~l~~~--------~~--------~~~-------------------~~l 722 (818)
.+.+ -+|||.++.| +-+|.+++++++++.+... +. .+. +.+
T Consensus 271 ~~~vi~~~SfSK~~~~G-lRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~ 349 (431)
T PRK15481 271 TQRWALIRSVSKALGPD-LRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKL 349 (431)
T ss_pred CCCEEEEeeeccccCCC-ceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH
Confidence 2332 3899999988 7999999998887765321 00 010 012
Q ss_pred HHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec--------CCEEEEECCCCChHHHH
Q 003466 723 IQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL--------GNVIYLMCGPCSSPEVC 794 (818)
Q Consensus 723 ~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~--------g~~ir~~ppl~~t~edI 794 (818)
.+.++.++........|.++-+.+..+ ...+++.|.++||.+.|+ ++.+|++... .+++++
T Consensus 350 ~~~L~~~~~~~~~p~gg~f~~~~l~~~----------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i 418 (431)
T PRK15481 350 ARALQQYGIAIPSPGDGLNLWLPLDTD----------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEI 418 (431)
T ss_pred HHHHHHcCCccccCCCeEEEEEECCCC----------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHH
Confidence 233344432111123355555554321 346788888999999972 1468888754 568999
Q ss_pred HHHHHHHHHHHH
Q 003466 795 SQLLLKLYQRLE 806 (818)
Q Consensus 795 d~~~~~l~~~l~ 806 (818)
++++++|.+++.
T Consensus 419 ~~~~~~l~~~~~ 430 (431)
T PRK15481 419 NRLAADLHQALN 430 (431)
T ss_pred HHHHHHHHHHhc
Confidence 999999988763
No 174
>PRK07550 hypothetical protein; Provisional
Probab=99.11 E-value=1.4e-08 Score=114.51 Aligned_cols=302 Identities=14% Similarity=0.059 Sum_probs=169.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ 476 (818)
.+||+.++... +...+.+.+++.+.+..... +....+..+....+++.+.+..+.. ..+.+++++++++|+..
T Consensus 30 ~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 105 (386)
T PRK07550 30 PLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWA 105 (386)
T ss_pred CeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 67788775532 22257888888876643111 1111234555677777777653321 12578888888899888
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
+++.. ...| .+|++-.-+|.+.. ..+...|..
T Consensus 106 ~~~~l-----~~~g----------------d~Vlv~~p~y~~~~-~~~~~~g~~-------------------------- 137 (386)
T PRK07550 106 AMVTL-----AGAG----------------DEVILPLPWYFNHK-MWLDMLGIR-------------------------- 137 (386)
T ss_pred HHHHh-----cCCC----------------CEEEEcCCCCcchH-HHHHhcCCE--------------------------
Confidence 87765 1222 25777766665432 111111111
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEE-EEEccccccCCCc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGA-LIIEPVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV~~g~gG~ 635 (818)
.+.+|..- + +. + ..+ .+.+++.++. ++.+ +++-| ++..|.
T Consensus 138 ----~~~v~~~~--------~---~~----~--~~~--------~~~l~~~~~~--------~~~~v~~~~P--~NPtG~ 178 (386)
T PRK07550 138 ----PVYLPCDE--------G---PG----L--LPD--------PAAAEALITP--------RTRAIALVTP--NNPTGV 178 (386)
T ss_pred ----EEEEecCC--------C---cC----C--CCC--------HHHHHHHhcc--------cCcEEEEeCC--CCCCCc
Confidence 01111000 0 00 0 000 1456666641 3334 55555 566777
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc---hhcccCC---CCcEEEeccccc-CCccccceeecchHHH
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET---TADLLGC---VPDIACYGKLLT-GGVIPLAATLATNAVF 708 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~---a~e~~gv---~PDivtlgKgLg-gGy~PlsAvl~~~~i~ 708 (818)
.. +.+.+++|.++|++||+++|.||++..| +.+... .....+- ...+.+|||.+| .| +.+|+++++++++
T Consensus 179 ~~-~~~~~~~i~~~~~~~~~~iI~Dd~y~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~RiG~i~~~~~~~ 255 (386)
T PRK07550 179 VY-PPELLHELYDLARRHGIALILDETYRDF-DSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTG-HRVGAVVASPARI 255 (386)
T ss_pred cc-CHHHHHHHHHHHHHcCeEEEEeccchhh-ccCCCCCcchhhCCCccccEEEEecchhhccCcc-cceEeeecCHHHH
Confidence 66 7899999999999999999999999776 322110 1111111 122448999998 67 6999999998887
Q ss_pred hhccCCh--------H--------HH--------------H---HHHHHHHHcCCCeeEEEeeeeE-EEEEEecCcccCC
Q 003466 709 DSFVGDS--------K--------LW--------------D---LELIQQISSHRTVQRVVALGTL-CAIELQAAGCNAG 754 (818)
Q Consensus 709 ~~l~~~~--------~--------~~--------------~---~~l~~~l~~~~~v~~vrg~Gl~-~~iel~~~~~~~~ 754 (818)
+.+.... . .+ . +.+.+.++.++.+ .+...|.+ +-+.+....
T Consensus 256 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~~~~~~~~~~---- 330 (386)
T PRK07550 256 AEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGW-ELLASGAYFAYVRHPFPD---- 330 (386)
T ss_pred HHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-eeCCCceEEEEecCCCCC----
Confidence 6543210 0 00 0 1122334444332 23333433 333333211
Q ss_pred CchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 755 YGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 755 ~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
..+.+++..|. ++||.+.|+ ++.+|++... .+++++++++++|.+.
T Consensus 331 ---~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 331 ---RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred ---CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 12556888765 689999873 2578888854 5689999999988753
No 175
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.11 E-value=2.4e-08 Score=114.23 Aligned_cols=299 Identities=12% Similarity=0.057 Sum_probs=173.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCC-------ChhHHHHHHHHHhccCCCCCCcEEEeCChhH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENV-------YEPALECAELLLQGVGKGWASRAYFSDNGST 472 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~-------~~~~~eLae~L~~~~~~~~l~~v~f~~SGse 472 (818)
-|||..+ .|-- .+.|.+|+.+.+..+.... .... .+...++-+.|+++++...-+.|+|++++++
T Consensus 34 iyLd~a~------~~~~-p~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 34 VYLDNAA------TSQK-PAAVLDALQDYYEEYNSNV-HRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE 105 (424)
T ss_pred EEeeCcc------ccCC-CHHHHHHHHHHHHhcCCCC-CCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence 6778643 4545 7889999988776543211 0111 1234566678888877531258999999999
Q ss_pred HHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccc---cCCCCCCCcCCCCcccCCCcccC
Q 003466 473 AIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEA---QAPSPYTGFLQQPWYSGRGLFLD 549 (818)
Q Consensus 473 A~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~---tg~~~~~~~~~~p~~~~~~~~~~ 549 (818)
|+..+++.. ....-+.| ..|++....|++....-..+ .|..
T Consensus 106 al~~i~~~~-~~~~~~~g----------------d~vl~~~~~~~s~~~~~~~~a~~~g~~------------------- 149 (424)
T PLN02855 106 AINLVAYTW-GLANLKPG----------------DEVILSVAEHHSNIVPWQLVAQKTGAV------------------- 149 (424)
T ss_pred HHHHHHHHh-hhhcCCCc----------------CEEEECCCccHHHHHHHHHHHHHcCCE-------------------
Confidence 998888743 10001111 35777666665432111111 1100
Q ss_pred CCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEcccc
Q 003466 550 PPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVV 629 (818)
Q Consensus 550 ~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~ 629 (818)
...++..... ..| .+.+++.+. .++.+|++.-+
T Consensus 150 ---------v~~v~~~~~~-----------~~~------------------~~~l~~~i~--------~~t~lv~i~~~- 182 (424)
T PLN02855 150 ---------LKFVGLTPDE-----------VLD------------------VEQLKELLS--------EKTKLVATHHV- 182 (424)
T ss_pred ---------EEEEecCCCC-----------CcC------------------HHHHHHHhc--------cCceEEEEeCc-
Confidence 0011110000 001 145666553 24567777765
Q ss_pred ccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCccccceeecchHH
Q 003466 630 HAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNAV 707 (818)
Q Consensus 630 ~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~i 707 (818)
+...|.+.+ +++|.++|+++|+++|+|++| ++|..- .-.+ ...+|++ .+.| +.|. --+|.+.+++++
T Consensus 183 ~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~-~~g~~~--~~~~--~~~~d~~~~s~~K-~~gp-~G~G~l~~~~~~ 251 (424)
T PLN02855 183 SNVLGSILP----VEDIVHWAHAVGAKVLVDACQ-SVPHMP--VDVQ--TLGADFLVASSHK-MCGP-TGIGFLWGKSDL 251 (424)
T ss_pred cccccccCC----HHHHHHHHHHcCCEEEEEhhh-hcCCcC--CCch--hcCCCEEEeeccc-ccCC-CccEEEEEchhh
Confidence 788888886 789999999999999999999 454321 1112 2346877 5789 4331 126778888877
Q ss_pred HhhccCC--------------------h-------H-------------H---------------HHHHHHHHHHcCCCe
Q 003466 708 FDSFVGD--------------------S-------K-------------L---------------WDLELIQQISSHRTV 732 (818)
Q Consensus 708 ~~~l~~~--------------------~-------~-------------~---------------~~~~l~~~l~~~~~v 732 (818)
.+.+... . . . +.+.+.+.+++.+.+
T Consensus 252 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~ 331 (424)
T PLN02855 252 LESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGV 331 (424)
T ss_pred hhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 6543210 0 0 0 011223344444433
Q ss_pred eEE-------EeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhC-CceEeec-------------CCEEEEECCCCChH
Q 003466 733 QRV-------VALGTLCAIELQAAGCNAGYGSLYAASLLKKLRED-GVYMRPL-------------GNVIYLMCGPCSSP 791 (818)
Q Consensus 733 ~~v-------rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~-Gvlv~p~-------------g~~ir~~ppl~~t~ 791 (818)
.-+ ...+.++.+.+... .+..+.+.|.++ ||.++.+ ...+|++++...|+
T Consensus 332 ~i~~~~~~~~~~r~~~v~~~~~~~---------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~ 402 (424)
T PLN02855 332 RIYGPKPSEGVGRAALCAFNVEGI---------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTK 402 (424)
T ss_pred EEeCCCcccccCcccEEEEEECCc---------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCH
Confidence 211 01234555555321 144678888887 9998742 25799999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003466 792 EVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 792 edId~~~~~l~~~l~~l~ 809 (818)
+||++++++|+++++.+.
T Consensus 403 ~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 403 EEVDAFIHALKDTIAFFS 420 (424)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999887754
No 176
>PLN00175 aminotransferase family protein; Provisional
Probab=99.11 E-value=2.8e-08 Score=113.46 Aligned_cols=304 Identities=13% Similarity=0.088 Sum_probs=173.7
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCCC-CC-cEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKGW-AS-RAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~~-l~-~v~f~~SGseA~e~ 476 (818)
..||+..|.. ++...+.+.+++.+.+++. ..+....+..+....+++.+.+..+... -+ .+++++++++|+..
T Consensus 55 ~~i~l~~G~P----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~ 130 (413)
T PLN00175 55 GAINLGQGFP----NFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAA 130 (413)
T ss_pred CeEecCCCCC----CCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHH
Confidence 4566655432 2232678899998887652 1122222344566777777766443210 13 58888888999888
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
++.... ..| ..|++.+-+|.+.. ..+...|...
T Consensus 131 ~~~~l~-----~~g----------------d~Vlv~~P~y~~~~-~~~~~~g~~~------------------------- 163 (413)
T PLN00175 131 TILGLI-----NPG----------------DEVILFAPFYDSYE-ATLSMAGAKI------------------------- 163 (413)
T ss_pred HHHHhC-----CCC----------------CEEEEeCCCchhHH-HHHHHcCCEE-------------------------
Confidence 877541 222 36788777775532 2222222110
Q ss_pred CcceeecCc-chhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 557 NSKWILSLP-EWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P-~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
..+++. +.+ -.| .+.+++.+. .++.+|++... ++..|.
T Consensus 164 ---~~v~~~~~~~-----------~~~------------------~~~l~~~~~--------~~~k~i~i~~p-~NPtG~ 202 (413)
T PLN00175 164 ---KTVTLRPPDF-----------AVP------------------EDELKAAFT--------SKTRAILINTP-HNPTGK 202 (413)
T ss_pred ---EEEECCcccC-----------CCC------------------HHHHHHhcC--------cCceEEEecCC-CCCCCc
Confidence 001110 000 000 144555553 24566676654 777887
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch-hcccCCCCc-E--EEeccccc-CCccccceeecchHHHhh
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT-ADLLGCVPD-I--ACYGKLLT-GGVIPLAATLATNAVFDS 710 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a-~e~~gv~PD-i--vtlgKgLg-gGy~PlsAvl~~~~i~~~ 710 (818)
+. +.+.+++|.++|++||+++|.||++..|-..+.... .+..+..+. | -+|||.++ .| +.+|.+++++++++.
T Consensus 203 ~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G-~RiG~~v~~~~l~~~ 280 (413)
T PLN00175 203 MF-TREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTG-WKIGWAIAPPHLTWG 280 (413)
T ss_pred CC-CHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcc-hheeeeEeCHHHHHH
Confidence 66 799999999999999999999999976632232211 111122222 2 37999998 67 799999999988775
Q ss_pred ccCChH----------------HHH-----------------HHHHHHHHcCCCeeEEEeeee-EEEEEEecCcccCCCc
Q 003466 711 FVGDSK----------------LWD-----------------LELIQQISSHRTVQRVVALGT-LCAIELQAAGCNAGYG 756 (818)
Q Consensus 711 l~~~~~----------------~~~-----------------~~l~~~l~~~~~v~~vrg~Gl-~~~iel~~~~~~~~~~ 756 (818)
+..... .+. +.+.+.++.++ +.-....|. ++-+.+...+ .
T Consensus 281 l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~~f~~~~~~~~~----~- 354 (413)
T PLN00175 281 VRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-FKVYPSSGTYFVMVDHTPFG----F- 354 (413)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeEEEEEeccccC----C-
Confidence 532110 110 11223344443 222223343 3444432110 0
Q ss_pred hHHHHHHHHHHH-hCCceEeec----------CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 757 SLYAASLLKKLR-EDGVYMRPL----------GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 757 ~~~a~~~~~~l~-e~Gvlv~p~----------g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
.....+++.|+ ++||.+.|+ .+.+|++.. .+++++++.+++|.+.++
T Consensus 355 -~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 355 -ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred -CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 11456788886 569999872 146888775 478999999999988764
No 177
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.10 E-value=1.1e-08 Score=114.52 Aligned_cols=161 Identities=12% Similarity=0.078 Sum_probs=99.9
Q ss_pred ccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCccccceeecchHH
Q 003466 630 HAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNAV 707 (818)
Q Consensus 630 ~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~i 707 (818)
.+..|++.+ +++|.++|++||+++|+|.+| ++|... .....+ .+|++ ++.|.|+|+ .-+|.++++++.
T Consensus 139 ~~~tG~~~~----i~~I~~l~~~~g~~livD~~~-~~g~~~--~~~~~~--~~D~~~~s~~K~l~~p-~G~G~l~~~~~~ 208 (363)
T TIGR02326 139 ETTTGILNP----IEAVAKLAHRHGKVTIVDAMS-SFGGIP--IDIAEL--HIDYLISSANKCIQGV-PGFGFVIARQAE 208 (363)
T ss_pred cCCccccCc----HHHHHHHHHHcCCEEEEEccc-cccCcc--cchhhc--CccEEEecCccccccC-CcceEEEECHHH
Confidence 345678876 899999999999999999998 465432 222333 46766 688998764 235778898877
Q ss_pred HhhccC--------------------C----hH-------------HH-H---------------HHHHHHHHcCCC--e
Q 003466 708 FDSFVG--------------------D----SK-------------LW-D---------------LELIQQISSHRT--V 732 (818)
Q Consensus 708 ~~~l~~--------------------~----~~-------------~~-~---------------~~l~~~l~~~~~--v 732 (818)
++.+.. + .. .+ . +.+.+.+++++. +
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 288 (363)
T TIGR02326 209 LAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPL 288 (363)
T ss_pred HHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeec
Confidence 654311 0 00 00 0 012222333321 1
Q ss_pred eEE-EeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec----CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 733 QRV-VALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL----GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 733 ~~v-rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~----g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
..- ...+.+..+.+.... ......+.+.|.++||.+++. .+.+|+.+...++.+|+++++++|++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 289 LDDEIQSPIITSFYSPEDP------DYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred cCcccCCceEEEEECCCCC------CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 100 012233344433210 012456888999999999875 37899998777899999999999988763
No 178
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.09 E-value=6e-09 Score=109.32 Aligned_cols=185 Identities=17% Similarity=0.132 Sum_probs=117.6
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC-
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC- 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv- 680 (818)
+.+|+.+..-..+.+..-...|.+|-. +...|-.+.|.+|+.++.+||++||+.|.+|-+- . |-+.-..||
T Consensus 137 edIe~~ir~~~GD~H~p~T~LIclENT-~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGAR-----i--~NAavasgV~ 208 (384)
T KOG1368|consen 137 EDIEAAIRVPKGDCHMPPTKLICLENT-HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGAR-----I--FNAAVASGVP 208 (384)
T ss_pred HHHHHhhcCCCCCccCCCceEEEeecc-ccccCceEeeHHHHHHHHHHHhccCCeeecchhh-----h--hhHHHHcCCC
Confidence 677877763221234445789999997 5655555669999999999999999999999432 1 233333333
Q ss_pred ------CCcE--EEecccccCCccccc-eeecchHHHhhcc-------CChH------------------HHH------H
Q 003466 681 ------VPDI--ACYGKLLTGGVIPLA-ATLATNAVFDSFV-------GDSK------------------LWD------L 720 (818)
Q Consensus 681 ------~PDi--vtlgKgLggGy~Pls-Avl~~~~i~~~l~-------~~~~------------------~~~------~ 720 (818)
..|- +|||||||. |+| .++++++.++... ++-+ .+. .
T Consensus 209 vk~i~~~fDSVsiCLSKglgA---PVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~~~L~~dHk~A~ 285 (384)
T KOG1368|consen 209 VKKICSAFDSVSICLSKGLGA---PVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENVPLLRADHKRAK 285 (384)
T ss_pred HHHHHHhhhhhhhhhhccCCC---CcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence 2343 599999997 444 4667887765321 1111 010 1
Q ss_pred HHHHHHHcCCCe-eEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHH
Q 003466 721 ELIQQISSHRTV-QRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQL 797 (818)
Q Consensus 721 ~l~~~l~~~~~v-~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~ 797 (818)
.+.+.+...+.+ ..|- ..--|..+++.... ..+..+++.+.++||++.+.. .++|+...--+|+++++.+
T Consensus 286 ~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~-------~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~ 358 (384)
T KOG1368|consen 286 ELAEYINTPEEIRVEVPAVETNIVNMVLCQAR-------LTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYV 358 (384)
T ss_pred HHHHHhccccceeeecchhhcceeeeeccccc-------CCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHH
Confidence 122222222211 2222 22334445553332 347789999999999998753 7899999999999999999
Q ss_pred HHHHHHH
Q 003466 798 LLKLYQR 804 (818)
Q Consensus 798 ~~~l~~~ 804 (818)
+..+++.
T Consensus 359 ~~~~~k~ 365 (384)
T KOG1368|consen 359 KSVLSKK 365 (384)
T ss_pred HHHHHHH
Confidence 9999543
No 179
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.09 E-value=2.1e-08 Score=113.42 Aligned_cols=306 Identities=12% Similarity=0.101 Sum_probs=170.3
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIA 477 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~A 477 (818)
.+||+..+. ..++. ++.+.+++.+.++... .+....+..+....+++.+....+.+ ..+.++++++|++|+..+
T Consensus 34 ~~i~l~~~~--~~~~~--~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 34 NVISLGIGE--PDFDT--PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred CeEEcCCCC--CCCCC--CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 466765543 22332 5788898888765421 11111233445556666665433311 125899999999999998
Q ss_pred HHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccC
Q 003466 478 LKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYN 557 (818)
Q Consensus 478 LklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 557 (818)
++... ..| ..|++-+.+|.+.. ..+...|...
T Consensus 110 ~~~l~-----~~g----------------~~Vlv~~p~y~~~~-~~~~~~g~~~-------------------------- 141 (391)
T PRK08361 110 FESLL-----EEG----------------DEVIIPDPAFVCYV-EDAKIAEAKP-------------------------- 141 (391)
T ss_pred HHHhc-----CCC----------------CEEEEcCCCCcccH-HHHHHcCCEE--------------------------
Confidence 87651 122 25777776665532 2222222210
Q ss_pred cceeecCcchhhhhccccccccc-cCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcc
Q 003466 558 SKWILSLPEWLYSKIVEHKDITF-CSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMH 636 (818)
Q Consensus 558 ~~~~v~~P~~~~~~~~~~~~~~~-nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~ 636 (818)
+.+|..- +-.| .| .+.+++.+. .++.++++... ++..|..
T Consensus 142 ----~~v~~~~--------~~~~~~d------------------~~~l~~~i~--------~~~~~v~i~~p-~NPtG~~ 182 (391)
T PRK08361 142 ----IRIPLRE--------ENEFQPD------------------PDELLELIT--------KRTRMIVINYP-NNPTGAT 182 (391)
T ss_pred ----EEEecCC--------ccCCCCC------------------HHHHHHhcc--------cccEEEEEeCC-CCCCCcC
Confidence 0111000 0000 11 144555553 13445555532 6777876
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc-cchhcccCCCCcEE--Eeccccc-CCccccceeecchHHHhhcc
Q 003466 637 MVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-ETTADLLGCVPDIA--CYGKLLT-GGVIPLAATLATNAVFDSFV 712 (818)
Q Consensus 637 ~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~~a~e~~gv~PDiv--tlgKgLg-gGy~PlsAvl~~~~i~~~l~ 712 (818)
. |.+-+++|.++|+++++++|+||++..|--.+. ......+....+++ ++||.+| .| +-+|.+++++++++.+.
T Consensus 183 ~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G-lRiG~~~~~~~~~~~~~ 260 (391)
T PRK08361 183 L-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTG-WRLGFVIAPEQVIKDMI 260 (391)
T ss_pred c-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcH-hhhhhhccCHHHHHHHH
Confidence 6 788899999999999999999999976622221 11111111122333 7999997 67 68888999988876542
Q ss_pred CC--------hH--------H---------HH----------HHHHHHHHcCCCeeEEEee-eeEEEEEEecCcccCCCc
Q 003466 713 GD--------SK--------L---------WD----------LELIQQISSHRTVQRVVAL-GTLCAIELQAAGCNAGYG 756 (818)
Q Consensus 713 ~~--------~~--------~---------~~----------~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~~ 756 (818)
.. .. . +. +.+.+.++.++.+.-.... |+++-+.+....
T Consensus 261 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~------ 334 (391)
T PRK08361 261 KLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETG------ 334 (391)
T ss_pred HHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCC------
Confidence 11 00 0 00 1123444555444323333 444444554211
Q ss_pred hHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 757 SLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 757 ~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
..+.++++.|+ ++||++.|+ .+.+|+... .+++++++++++|.+.+++
T Consensus 335 -~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 335 -MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred -CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 11445777776 579999872 256788765 4678899999999887754
No 180
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.08 E-value=4.7e-08 Score=112.97 Aligned_cols=201 Identities=11% Similarity=0.057 Sum_probs=114.8
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccC----cccC---Cccch
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTG----FWRL---GVETT 674 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TG----fGRt---G~~~a 674 (818)
+.|++.+.. .+++++++|+++.. ++..|..+.+.+.+++|+++|++||+++|.|+++.. |+.. |....
T Consensus 164 e~Le~~i~~----~~~~~tk~Ivl~~p-~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~ 238 (460)
T PRK13238 164 EKLEALIEE----VGAENVPFIVMTIT-NNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDK 238 (460)
T ss_pred HHHHHHHhh----cCCCceeEEEEecC-CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCC
Confidence 667777763 23467899999875 666554566899999999999999999999998742 1110 10000
Q ss_pred h--cc---cCCCCcEEEecccccCCccccceeec-c-hHHHhhccCC-----hH-------------------------H
Q 003466 675 A--DL---LGCVPDIACYGKLLTGGVIPLAATLA-T-NAVFDSFVGD-----SK-------------------------L 717 (818)
Q Consensus 675 ~--e~---~gv~PDivtlgKgLggGy~PlsAvl~-~-~~i~~~l~~~-----~~-------------------------~ 717 (818)
. +. .+=-.|+++++ +--.|+.|.|.+++ + +++++.+... +. +
T Consensus 239 si~~i~~~~~s~~D~~~~S-g~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~ 317 (460)
T PRK13238 239 SIKEIAREMFSYADGLTMS-AKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDY 317 (460)
T ss_pred CHHHHhhhhcccCcEEEEe-cccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHH
Confidence 0 00 01126777766 33345567666666 4 4666544221 00 0
Q ss_pred H------HHHHHHHHHcCCCeeEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec------------
Q 003466 718 W------DLELIQQISSHRTVQRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL------------ 777 (818)
Q Consensus 718 ~------~~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~------------ 777 (818)
+ .+.+.+.|...+. .-+. ..|..+-+++..-..+.......+..++.+|+ +.||-+.|.
T Consensus 318 ~~~~~~~~~~l~~~L~~~G~-~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~ 396 (460)
T PRK13238 318 LAYRIGQVEYLGEGLEEAGV-PIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTG 396 (460)
T ss_pred HHHHHHHHHHHHHHHHHCCC-CeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCc
Confidence 0 0112333444332 1122 22344444443211111111111455776666 779988651
Q ss_pred ------CCEEEEECCC-CChHHHHHHHHHHHHHHHHHHH
Q 003466 778 ------GNVIYLMCGP-CSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 778 ------g~~ir~~ppl-~~t~edId~~~~~l~~~l~~l~ 809 (818)
-+.+||..|- +.|.+++|.+.++|.+..+.-+
T Consensus 397 ~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~ 435 (460)
T PRK13238 397 EQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRE 435 (460)
T ss_pred cccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhHh
Confidence 1678998886 5699999999999988775544
No 181
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.08 E-value=6.8e-08 Score=109.39 Aligned_cols=307 Identities=14% Similarity=0.117 Sum_probs=174.8
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCC--CCCcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKG--WASRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~--~l~~v~f~~SGseA~e~ 476 (818)
.+||+..|... ++. .+.+.+++.+.+... ..+....+..+....+++.+....+.. .-+.++++++|++|+..
T Consensus 31 ~~i~l~~~~~~--~~~--~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 31 GILKLTLGEPD--FTT--PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CeEEcCCCCCC--CCC--CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 56777665432 332 577888888877542 112112233445556666665433311 01579999999999999
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
++.... ..| ..|+.-..+|.+.. ......|...
T Consensus 107 ~~~~~~-----~~g----------------d~vl~~~p~y~~~~-~~~~~~g~~~------------------------- 139 (391)
T PRK07309 107 SLTAIL-----EPG----------------DKVLLPAPAYPGYE-PIVNLVGAEI------------------------- 139 (391)
T ss_pred HHHHhc-----CCC----------------CEEEEeCCCCcchH-HHHHHcCCEE-------------------------
Confidence 888651 122 36788888887743 2222222110
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEc-cccccCCCc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIE-PVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvE-PV~~g~gG~ 635 (818)
..++.+.. .|. + + .+.+++.+.. ..+++.+|++. | ++..|.
T Consensus 140 ---~~~~~~~~-----------~~~-~--------d--------~~~l~~~~~~-----~~~~~~~i~l~~P--~NPtG~ 181 (391)
T PRK07309 140 ---VEIDTTEN-----------DFV-L--------T--------PEMLEKAILE-----QGDKLKAVILNYP--ANPTGV 181 (391)
T ss_pred ---EEEecCCc-----------CCc-C--------C--------HHHHHHHhhc-----cCCCeEEEEEECC--CCCCCc
Confidence 00110000 000 0 0 1456666652 23456677766 5 567777
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc-chhcccCCCCc--E--EEeccccc-CCccccceeecchHHHh
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-TTADLLGCVPD--I--ACYGKLLT-GGVIPLAATLATNAVFD 709 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-~a~e~~gv~PD--i--vtlgKgLg-gGy~PlsAvl~~~~i~~ 709 (818)
.. +.+-+++|.++|++||+++|+||++..|--.|.. .....+ .+| + -++||.+| .| +-+|.+++++++++
T Consensus 182 ~~-s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~G-lRvG~~v~~~~~~~ 257 (391)
T PRK07309 182 TY-SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQTILINGLSKSHAMTG-WRIGLIFAPAEFTA 257 (391)
T ss_pred Cc-CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh--ccCCEEEEecChhhccCcc-ceeEEEEeCHHHHH
Confidence 66 6788999999999999999999999766322421 111111 233 2 27999997 67 78999999998877
Q ss_pred hccCChH----------------HHH-----------------HHHHHHHHcCCCeeEEEee-eeEEEEEEecCcccCCC
Q 003466 710 SFVGDSK----------------LWD-----------------LELIQQISSHRTVQRVVAL-GTLCAIELQAAGCNAGY 755 (818)
Q Consensus 710 ~l~~~~~----------------~~~-----------------~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~ 755 (818)
.+..... .+. +.+.+.++.++ +.-.... |.++-+.+....
T Consensus 258 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~p~gg~~~~~~l~~~~----- 331 (391)
T PRK07309 258 QLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-FKIIKPDGAFYIFAKIPAGY----- 331 (391)
T ss_pred HHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCeeEEEEEECCCCC-----
Confidence 6542110 110 01223334443 2212222 344434443210
Q ss_pred chHHHHHHHHH-HHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 756 GSLYAASLLKK-LREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 756 ~~~~a~~~~~~-l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
. .....+++. +.++||++.|+ ++.+|+... .+++++++++++|.++++++
T Consensus 332 ~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 332 N-QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 0 124456765 45789999873 257888766 36789999999999888664
No 182
>PRK09082 methionine aminotransferase; Validated
Probab=99.07 E-value=2.6e-08 Score=112.53 Aligned_cols=302 Identities=17% Similarity=0.113 Sum_probs=170.4
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCCC-C-CcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKGW-A-SRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~~-l-~~v~f~~SGseA~e~ 476 (818)
.+||+..|.. .++ . ++.+.+++.+.++... .+....+..+...++++.+.+..+... . +.++++++|++|+..
T Consensus 31 ~~i~l~~g~~--~~~-~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 31 GAINLSQGFP--DFD-G-PPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CEEEecCCCC--CCC-C-CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 5677766532 233 3 6889999888765421 111223345667788888877655321 1 268899999999999
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
+++... ..| ..|+..+-+|.+. ..++...|..
T Consensus 107 ~~~~~~-----~~g----------------d~Vli~~p~y~~~-~~~~~~~g~~-------------------------- 138 (386)
T PRK09082 107 AILALV-----RPG----------------DEVIVFDPSYDSY-APAIELAGGR-------------------------- 138 (386)
T ss_pred HHHHHc-----CCC----------------CEEEEeCCCchhh-HHHHHHcCCE--------------------------
Confidence 888651 222 2566666655442 2222222211
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMH 636 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~ 636 (818)
.+.+|.... + |+ .+ .+.+++.+. .++.+|++... ++..|..
T Consensus 139 ----~~~~~~~~~-------~--~~---------~d--------~~~l~~~~~--------~~~~~v~l~~p-~NPtG~~ 179 (386)
T PRK09082 139 ----AVRVALQPP-------D--FR---------VD--------WQRFAAAIS--------PRTRLIILNTP-HNPSGTV 179 (386)
T ss_pred ----EEEEecCcc-------c--cc---------CC--------HHHHHHhcC--------ccceEEEEeCC-CCCCCcC
Confidence 011110000 0 00 00 144555553 24556666554 6777776
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc--hhcccCCCCcE---EEeccccc-CCccccceeecchHHHhh
Q 003466 637 MVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET--TADLLGCVPDI---ACYGKLLT-GGVIPLAATLATNAVFDS 710 (818)
Q Consensus 637 ~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~--a~e~~gv~PDi---vtlgKgLg-gGy~PlsAvl~~~~i~~~ 710 (818)
. +++-+++|.++|++||+++|+||++..+--.+..+ .....+..+.+ -+|||.+| .| +-+|.+++++++++.
T Consensus 180 ~-~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~iv~~~~l~~~ 257 (386)
T PRK09082 180 W-SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG-WKVGYCVAPAALSAE 257 (386)
T ss_pred C-CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh-hhhhhhhCCHHHHHH
Confidence 6 68899999999999999999999986542222211 11222322222 27999997 56 788899999988876
Q ss_pred ccCChH----------------HHH-----------------HHHHHHHHcCCCeeEEE-eeeeEEEEEEecCcccCCCc
Q 003466 711 FVGDSK----------------LWD-----------------LELIQQISSHRTVQRVV-ALGTLCAIELQAAGCNAGYG 756 (818)
Q Consensus 711 l~~~~~----------------~~~-----------------~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~ 756 (818)
+..... ++. +.+.+.++.+. +.-.. ..|+++-+.+.+-.
T Consensus 258 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~g~~~~~~~~~~~~------ 330 (386)
T PRK09082 258 FRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR-FKLLPCEGTYFQLVDYSAIS------ 330 (386)
T ss_pred HHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCeeEEEEEeccccC------
Confidence 543210 111 01122333332 21111 23455555654210
Q ss_pred hHHHHHHHHHH-HhCCceEeec---------CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 757 SLYAASLLKKL-REDGVYMRPL---------GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 757 ~~~a~~~~~~l-~e~Gvlv~p~---------g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
......+++.| .++||.+.|+ .+.+|++.. .+++++++.+++|.+
T Consensus 331 ~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 331 DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 01245677776 5779999873 146888765 478889998888764
No 183
>PRK14012 cysteine desulfurase; Provisional
Probab=99.07 E-value=4.2e-08 Score=111.53 Aligned_cols=204 Identities=14% Similarity=0.091 Sum_probs=121.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhh---hcccccCCCC-----CChhHHHHHHHHHhccCCCCCCcEEEeCChh
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAA---RFGHVMFPEN-----VYEPALECAELLLQGVGKGWASRAYFSDNGS 471 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~---~~~~~~~~~~-----~~~~~~eLae~L~~~~~~~~l~~v~f~~SGs 471 (818)
-|+|..+ .+-- ++.+.+|+.+.+. .++....... ..+...++.++++++++.+ .+.++|+++|+
T Consensus 5 iyld~a~------~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~-~~~v~~~~g~t 76 (404)
T PRK14012 5 IYLDYSA------TTPV-DPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD-PREIVFTSGAT 76 (404)
T ss_pred EEecCcC------CCCC-CHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC-cCeEEEeCCHH
Confidence 6788665 3555 8999999988775 2221110000 0134567778888888743 35699999999
Q ss_pred HHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCcccccccc---CCCCCCCcCCCCcccCCCccc
Q 003466 472 TAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQ---APSPYTGFLQQPWYSGRGLFL 548 (818)
Q Consensus 472 eA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~t---g~~~~~~~~~~p~~~~~~~~~ 548 (818)
+|+..+++.+.+.+. ..| ..||+-... |.+...+.... |..
T Consensus 77 ~al~~~l~~l~~~~~-~~g----------------d~Vi~~~~~-~~s~~~~~~~~~~~g~~------------------ 120 (404)
T PRK14012 77 ESDNLAIKGAAHFYQ-KKG----------------KHIITSKTE-HKAVLDTCRQLEREGFE------------------ 120 (404)
T ss_pred HHHHHHHHHHHHhhc-CCC----------------CEEEEecCc-cHHHHHHHHHHHhCCCE------------------
Confidence 999999987622221 111 245555554 44333322110 100
Q ss_pred CCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccc
Q 003466 549 DPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPV 628 (818)
Q Consensus 549 ~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV 628 (818)
...++.+..+ ..| .+.+++.|. .+..+|++..+
T Consensus 121 ----------~~~v~~~~~g-----------~~d------------------~~~l~~~i~--------~~t~lv~~~~~ 153 (404)
T PRK14012 121 ----------VTYLDPQSNG-----------IID------------------LEKLEAAMR--------DDTILVSIMHV 153 (404)
T ss_pred ----------EEEEccCCCC-----------cCC------------------HHHHHHhcC--------CCCEEEEEECc
Confidence 0011111000 001 255666664 24567878876
Q ss_pred cccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchH
Q 003466 629 VHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNA 706 (818)
Q Consensus 629 ~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~ 706 (818)
++..|.+.+ +++|.++|++||+++|+|++|+ +|..- . ......+|+++++ |.+|.+ .+|+++++++
T Consensus 154 -~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~--~--~~~~~~~D~~~~s~~K~~gp~--g~G~l~~~~~ 221 (404)
T PRK14012 154 -NNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP--I--DLSKLKVDLMSFSAHKIYGPK--GIGALYVRRK 221 (404)
T ss_pred -CCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc--c--CcccCCCCEEEEehhhccCCC--ceEEEEEecC
Confidence 788888876 8999999999999999999995 43331 1 1112358999888 976532 3667777654
No 184
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.06 E-value=6.7e-08 Score=109.35 Aligned_cols=176 Identities=18% Similarity=0.204 Sum_probs=109.4
Q ss_pred cEEEEE-EccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hh-cccCCCCcEE---Eeccccc
Q 003466 619 CIGALI-IEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TA-DLLGCVPDIA---CYGKLLT 692 (818)
Q Consensus 619 ~iAAVI-vEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~-e~~gv~PDiv---tlgKgLg 692 (818)
++.+|+ .-| +...|.+. +.+-+++|.++|+++|+++|+||++.+|...|... .. ...+..+.++ +|||.++
T Consensus 162 ~~~~v~i~~p--~NPtG~~~-~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~ 238 (397)
T PRK07568 162 KTKAILISNP--GNPTGVVY-TKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYS 238 (397)
T ss_pred cceEEEEECC--CCCCCccC-CHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhcc
Confidence 344554 455 56677655 77889999999999999999999999885555321 11 1122233343 7999998
Q ss_pred C-Cccccceeecc-hHHHhhccC---C----hH--------HHH-----------------HHHHHHHHcCCCeeEEEee
Q 003466 693 G-GVIPLAATLAT-NAVFDSFVG---D----SK--------LWD-----------------LELIQQISSHRTVQRVVAL 738 (818)
Q Consensus 693 g-Gy~PlsAvl~~-~~i~~~l~~---~----~~--------~~~-----------------~~l~~~l~~~~~v~~vrg~ 738 (818)
. | +.+|.++++ +++++.+.. . +. .+. +.+.+.|+.++.+.-....
T Consensus 239 ~~G-~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (397)
T PRK07568 239 ACG-ARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPK 317 (397)
T ss_pred CCC-cceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC
Confidence 4 7 799999884 667654321 0 00 110 1123444555443323334
Q ss_pred ee-EEEEEEecCcccCCCchHHHHHHHHHHHh------CCceEeec----------CCEEEEECCCCChHHHHHHHHHHH
Q 003466 739 GT-LCAIELQAAGCNAGYGSLYAASLLKKLRE------DGVYMRPL----------GNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 739 Gl-~~~iel~~~~~~~~~~~~~a~~~~~~l~e------~Gvlv~p~----------g~~ir~~ppl~~t~edId~~~~~l 801 (818)
|. ++-+.+... .+..+++.|.+ +||++.|+ ++.+|++.. .+++++++++++|
T Consensus 318 g~~~~~~~l~~~---------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l 386 (397)
T PRK07568 318 GAFYIIAKLPVD---------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEIL 386 (397)
T ss_pred cceEEEEecCCC---------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHH
Confidence 43 333444321 13456677764 69999872 147888754 5689999999999
Q ss_pred HHHHHHHH
Q 003466 802 YQRLEEFD 809 (818)
Q Consensus 802 ~~~l~~l~ 809 (818)
.+++++..
T Consensus 387 ~~~l~~~~ 394 (397)
T PRK07568 387 KEALEKYN 394 (397)
T ss_pred HHHHHHhh
Confidence 99887643
No 185
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.06 E-value=2.5e-08 Score=113.13 Aligned_cols=300 Identities=12% Similarity=0.056 Sum_probs=171.8
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccC-CCCCChhHHHHHHHHHhccCCC-CC-CcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMF-PENVYEPALECAELLLQGVGKG-WA-SRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~-~~~~~~~~~eLae~L~~~~~~~-~l-~~v~f~~SGseA~e~ 476 (818)
.+||+..|.. .++ - .+.+.+++.+.+........ ..+..+....+++.+....+.. .. +.+++++++++|...
T Consensus 33 ~~i~l~~g~p--~~~-~-~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~ 108 (399)
T PRK07681 33 KMIDLSIGNP--DMP-P-ADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVH 108 (399)
T ss_pred CeEEeCCCCC--CCC-C-CHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHH
Confidence 6778776532 233 2 67889998887654221111 1344556677777776543321 12 478999999998888
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
+++.. -..| ..|++.+-+|.+....+. ..|..
T Consensus 109 ~~~~~-----~~~G----------------d~Vlv~~P~y~~~~~~~~-~~G~~-------------------------- 140 (399)
T PRK07681 109 LPMVY-----ANPG----------------DIILVPDPGYTAYETGIQ-MAGAT-------------------------- 140 (399)
T ss_pred HHHHh-----CCCC----------------CEEEECCCCccchHHHHH-hcCCE--------------------------
Confidence 77654 1222 367887888876432221 11111
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEc-cccccCCCc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIE-PVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvE-PV~~g~gG~ 635 (818)
.+++|-.- -+ .|. .+ .+.+++.+. .++.+|++- | ++-.|.
T Consensus 141 ----~~~v~~~~-----------~~----~~~--~d--------~~~l~~~~~--------~~~k~v~l~~P--~NPTG~ 181 (399)
T PRK07681 141 ----SYYMPLKK-----------EN----DFL--PD--------LELIPEEIA--------DKAKMMILNFP--GNPVPA 181 (399)
T ss_pred ----EEEEecCC-----------CC----CCc--CC--------HHHHHHhcc--------ccceEEEEeCC--CCCcCc
Confidence 11111000 00 000 00 133444442 234555554 7 677787
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-h-hcccCC---CCcEEEeccccc-CCccccceeecchHHHh
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-T-ADLLGC---VPDIACYGKLLT-GGVIPLAATLATNAVFD 709 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a-~e~~gv---~PDivtlgKgLg-gGy~PlsAvl~~~~i~~ 709 (818)
+. +.+-+++|.++|++||+++|.||++..|--.+... . .+..+. .-.+-+|||.+| .| +-+|.+++++++++
T Consensus 182 ~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~~i~~~~l~~ 259 (399)
T PRK07681 182 MA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAG-SRIGYMIGNEEIVR 259 (399)
T ss_pred CC-CHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCcc-ceeEEEecCHHHHH
Confidence 76 78889999999999999999999998662222211 1 111111 112348999997 67 68899999998887
Q ss_pred hccCCh--------H--------HH-------H----------HHHHHHHHcCCCeeEEEe-eeeEEEEEEecCcccCCC
Q 003466 710 SFVGDS--------K--------LW-------D----------LELIQQISSHRTVQRVVA-LGTLCAIELQAAGCNAGY 755 (818)
Q Consensus 710 ~l~~~~--------~--------~~-------~----------~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~ 755 (818)
.+.... . .+ . +.+.+.++.++ +.-... .|.++-+.+...
T Consensus 260 ~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~~g~f~~~~l~~~------ 332 (399)
T PRK07681 260 ALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFG-WNVDKPAGSMFVWAEIPKG------ 332 (399)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCeeeEEEEECCCC------
Confidence 653211 0 00 0 11233444443 221122 255555555322
Q ss_pred chHHHHHHHHHHHh-CCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 756 GSLYAASLLKKLRE-DGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 756 ~~~~a~~~~~~l~e-~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
..+.+++..|++ +||++.|+ .+.+|+... .+++++++++++|.+
T Consensus 333 --~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 333 --WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred --CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 124568888887 89999873 146788765 568999999999987
No 186
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.05 E-value=8.9e-08 Score=107.89 Aligned_cols=170 Identities=12% Similarity=0.082 Sum_probs=103.7
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCcc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVI 696 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~ 696 (818)
+..+|++..+ ++..|.+.+ +++|.++|++||+++|+|++|. +|.. - .......+|+++++ |-+| .
T Consensus 140 ~t~lv~~~~~-~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~--~--~~~~~~~~D~~~~s~~K~~g---p 206 (382)
T TIGR03403 140 KTALVSVMWA-NNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI--P--VDVQKAGVDFLSFSAHKFHG---P 206 (382)
T ss_pred CCeEEEEEcc-cCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC--c--cCccccCCCEEEEcchhhCC---C
Confidence 3466777765 788898886 7899999999999999999985 4321 1 11112347899888 9533 1
Q ss_pred c-cceeecchHHH--hhcc---------CChH---------------------------HHHHHHHHHHHcCCCeeEEEe
Q 003466 697 P-LAATLATNAVF--DSFV---------GDSK---------------------------LWDLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 697 P-lsAvl~~~~i~--~~l~---------~~~~---------------------------~~~~~l~~~l~~~~~v~~vrg 737 (818)
| +|++..++... ..+. .+.. .+.+.+.+.++..+.+.-+..
T Consensus 207 ~G~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 286 (382)
T TIGR03403 207 KGVGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGD 286 (382)
T ss_pred CceEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECC
Confidence 2 45554444321 1110 0000 011123334444444322211
Q ss_pred e----eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec------------------------CCEEEEECCCCC
Q 003466 738 L----GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL------------------------GNVIYLMCGPCS 789 (818)
Q Consensus 738 ~----Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~------------------------g~~ir~~ppl~~ 789 (818)
. ..++.+.+... .+..+.+.|.++||.++.+ +..+|+++....
T Consensus 287 ~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~ 357 (382)
T TIGR03403 287 REHRVPNTILISIKGV---------EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFT 357 (382)
T ss_pred CCCCcCCEEEEEeCCC---------CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCC
Confidence 1 22333444221 1445666788999999841 246999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 003466 790 SPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 790 t~edId~~~~~l~~~l~~l~~ 810 (818)
|++|||+++++|+++++++..
T Consensus 358 t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 358 TEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998887654
No 187
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.04 E-value=5.5e-08 Score=108.41 Aligned_cols=302 Identities=12% Similarity=0.029 Sum_probs=168.1
Q ss_pred eeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHHHHH
Q 003466 401 QFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIEIAL 478 (818)
Q Consensus 401 ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e~AL 478 (818)
.+|+.+|.. .++- .|++.+++++.+.....+....+..+....+++.+....+-. ..+ .+++++++++|...++
T Consensus 2 ~~~~~~g~p--~~~~--~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~ 77 (350)
T TIGR03537 2 LFDFGTGDP--KEPT--PPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred eEeccCCCC--CCCC--CHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 567776543 3442 578999998876543322222233455666777765543321 023 7999999999887776
Q ss_pred HHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCc
Q 003466 479 KMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNS 558 (818)
Q Consensus 479 klA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~ 558 (818)
... ...|+ ....|+.-+-+|.+....+.. .|.+
T Consensus 78 ~~~-----~~~g~-------------~~d~Vl~~~p~y~~~~~~~~~-~g~~---------------------------- 110 (350)
T TIGR03537 78 LVF-----IDPEE-------------DRRRVIFGTPGYPVYERGALF-AGGE---------------------------- 110 (350)
T ss_pred HHH-----cCCCC-------------CCceEEEcCCCCcchHHHHHh-cCCE----------------------------
Confidence 644 11110 113788888888765433221 1111
Q ss_pred ceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccC
Q 003466 559 KWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMV 638 (818)
Q Consensus 559 ~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~ 638 (818)
.+.+|.... ++ |. + + .+.+++.+.+ ++.++++.+- ++-.|.+.
T Consensus 111 --~~~v~~~~~------~~--~~-~--------d--------~~~l~~~~~~--------~~~~i~i~~p-~NPtG~~~- 153 (350)
T TIGR03537 111 --PTAVKLKKE------DG--FL-L--------R--------LEKVEKSILE--------ETKIVWINYP-HNPTGATA- 153 (350)
T ss_pred --EEEcccCcc------cC--Cc-c--------C--------HHHHHHhhhh--------ccEEEEEeCC-CCCcCccc-
Confidence 011110000 00 00 0 0 1445555541 3445555543 67778665
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccCCc-cchhcccCCCCcEE--Eeccccc-CCccccceeecchHHHhhccCC
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-ETTADLLGCVPDIA--CYGKLLT-GGVIPLAATLATNAVFDSFVGD 714 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~~a~e~~gv~PDiv--tlgKgLg-gGy~PlsAvl~~~~i~~~l~~~ 714 (818)
+.+-+++|.++|++||+++|.||++.-+ ..+. ......++....++ ++||.+| .| +-+|.+++++++.+.+...
T Consensus 154 ~~~~~~~l~~~a~~~~~~ii~De~y~~~-~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G-lRiG~~~~~~~~~~~~~~~ 231 (350)
T TIGR03537 154 PRSYLKETIAMCREHGIILCSDECYTEI-YFGEPPHSALEVGIENVLAFHSLSKRSGMTG-YRSGFVAGDEKLISFLRKL 231 (350)
T ss_pred CHHHHHHHHHHHHHcCcEEEEecccccc-ccCCCCCchhhcCcCCEEEEeecccccCCcc-ccceeeecCHHHHHHHHHH
Confidence 8899999999999999999999998543 2222 11111122111233 6899986 45 6788888888877655321
Q ss_pred hH----------------------HH---H-------HHHHHHHHcCCCeeEEEee-eeEEEEEEecCcccCCCchHHHH
Q 003466 715 SK----------------------LW---D-------LELIQQISSHRTVQRVVAL-GTLCAIELQAAGCNAGYGSLYAA 761 (818)
Q Consensus 715 ~~----------------------~~---~-------~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~~~~~a~ 761 (818)
.. .+ . +.+.+.++.++. .-.... |+++-+++... ..+.
T Consensus 232 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g~-~~~~~~g~~~~~~~~~~~--------~~~~ 302 (350)
T TIGR03537 232 RANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVGL-EYLYPDATFYLWVKVPSG--------IDAK 302 (350)
T ss_pred HHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCeEEEEEEECCCC--------CCHH
Confidence 00 00 0 112233344432 111222 44455555432 1245
Q ss_pred HHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 762 SLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 762 ~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
.+++.|.++||++.|+ .+.+|+... .+++++++++++|.+
T Consensus 303 ~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 303 DYALRLLENGIVVAPGENFGSGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred HHHHHHHHCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 7889999999999862 256787653 568889988887754
No 188
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.03 E-value=2.6e-08 Score=112.83 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=91.9
Q ss_pred HHHHHHHHHhcCCcEEEeecc-cCcccCCccchhcccCCCCcEE--EecccccCCccccceeecch-HHHhhccCC----
Q 003466 643 QRILVKECQNRKIPVIFDEVF-TGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATN-AVFDSFVGD---- 714 (818)
Q Consensus 643 l~~LreLc~~~gilLI~DEV~-TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~-~i~~~l~~~---- 714 (818)
+++|.++|++||+++|+||+| .|+--.|... ..+. ..|++ +++|+++| .+.|++++++ ++++.+...
T Consensus 178 ~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~--~~~~-~~dv~~~s~sK~l~G--~~gg~i~~~~~~~~~~l~~~~~~~ 252 (402)
T cd00378 178 FKRFREIADEVGAYLLVDMAHVAGLVAGGVFP--NPLP-GADVVTTTTHKTLRG--PRGGLILTRKGELAKKINSAVFPG 252 (402)
T ss_pred HHHHHHHHHhcCCEEEEEccchhhhhhcccCC--Cccc-CCcEEEeccccCCCC--CCceEEEeccHHHHHHHHHHhCcc
Confidence 899999999999999999997 3431122111 1111 35765 68899944 4677788876 776544210
Q ss_pred ----hH-------------HHH--------------HHHHHHHHcCCCeeEE-E-eeeeEEEEEEecCcccCCCchHHHH
Q 003466 715 ----SK-------------LWD--------------LELIQQISSHRTVQRV-V-ALGTLCAIELQAAGCNAGYGSLYAA 761 (818)
Q Consensus 715 ----~~-------------~~~--------------~~l~~~l~~~~~v~~v-r-g~Gl~~~iel~~~~~~~~~~~~~a~ 761 (818)
.. ... +.+.+.|.+++. .-+ . ..+.++-+.+.... ....
T Consensus 253 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~v~v~~~~~~-------~~~~ 324 (402)
T cd00378 253 LQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGF-KVVSGGTDNHLVLVDLRPKG-------ITGK 324 (402)
T ss_pred ccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC-eEeecCCCCeEEEEeCCccC-------CCHH
Confidence 00 000 012233444432 111 1 12444445543221 1123
Q ss_pred HHHHHHHhCCceEee-----------cCCEEEEECCCC----ChHHHHHHHHHHHHHHHHHHH
Q 003466 762 SLLKKLREDGVYMRP-----------LGNVIYLMCGPC----SSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 762 ~~~~~l~e~Gvlv~p-----------~g~~ir~~ppl~----~t~edId~~~~~l~~~l~~l~ 809 (818)
.+.+.|.++||++.+ ..+.+|+.+... ++++||+++++.|.+++.+-+
T Consensus 325 ~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 325 AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 556678889999963 225789877663 479999999999999887655
No 189
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.03 E-value=4.9e-08 Score=110.48 Aligned_cols=292 Identities=14% Similarity=0.114 Sum_probs=168.6
Q ss_pred CHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-C-CCcEEEeCChhHHHHHHHHHHHHHhhhcccccc
Q 003466 418 QIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-W-ASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLV 493 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~-l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~ 493 (818)
++.+.+|+.+.+..... +....+..+....+++.|++..+.. . .+.+++++++++|...++.... ..|
T Consensus 42 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~-----~~g--- 113 (389)
T PRK05957 42 PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAIT-----DPG--- 113 (389)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhc-----CCC---
Confidence 67889999887654321 1122344566778888888876532 0 2468888888888877776541 122
Q ss_pred cccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcc
Q 003466 494 DFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIV 573 (818)
Q Consensus 494 ~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~ 573 (818)
..|++-+.+|-+... .....|.. .+.+|..
T Consensus 114 -------------d~Vlv~~P~y~~~~~-~~~~~g~~------------------------------~~~v~~~------ 143 (389)
T PRK05957 114 -------------DEIILNTPYYFNHEM-AITMAGCQ------------------------------PILVPTD------ 143 (389)
T ss_pred -------------CEEEEeCCCCcCHHH-HHHhcCCE------------------------------EEEeecC------
Confidence 257776666643211 11111111 1111100
Q ss_pred ccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhc
Q 003466 574 EHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNR 653 (818)
Q Consensus 574 ~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~ 653 (818)
++ +. .+ .+.+++.+. +++.+|++-.. +...|.+. |.+-+++|.++|++|
T Consensus 144 -------~~----~~--~d--------~~~l~~~i~--------~~~klv~~~~p-~NPtG~~~-~~~~~~~i~~~a~~~ 192 (389)
T PRK05957 144 -------DN----YQ--LQ--------PEAIEQAIT--------PKTRAIVTISP-NNPTGVVY-PEALLRAVNQICAEH 192 (389)
T ss_pred -------CC----CC--cC--------HHHHHHhcC--------cCceEEEEeCC-CCCCCcCc-CHHHHHHHHHHHHHc
Confidence 00 00 00 145555553 23445555443 77788777 788999999999999
Q ss_pred CCcEEEeecccCcccCCcc-ch-hcccCCCC---cEEEeccccc-CCccccceeecchHHHhhccCChH-----------
Q 003466 654 KIPVIFDEVFTGFWRLGVE-TT-ADLLGCVP---DIACYGKLLT-GGVIPLAATLATNAVFDSFVGDSK----------- 716 (818)
Q Consensus 654 gilLI~DEV~TGfGRtG~~-~a-~e~~gv~P---DivtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~~----------- 716 (818)
|+++|.||++..|--.+.- .. ....+..+ .+.+|||.+| .| +-+|.+++++++++.+.....
T Consensus 193 ~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q 271 (389)
T PRK05957 193 GIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFAS-WRIGYMVIPIHLLEAIKKIQDTILICPPVVSQ 271 (389)
T ss_pred CcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCcc-ceeEEEecCHHHHHHHHHHHhhcccCCCcHHH
Confidence 9999999999766322211 11 11112222 2447999997 67 789999999998876642110
Q ss_pred ------------HHH----------HHHHHHHHcCCCeeEE-Eee-eeEEEEEEecCcccCCCchHHHHHHHHHHH-hCC
Q 003466 717 ------------LWD----------LELIQQISSHRTVQRV-VAL-GTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDG 771 (818)
Q Consensus 717 ------------~~~----------~~l~~~l~~~~~v~~v-rg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~G 771 (818)
.++ +.+.+.++.++.+..+ ... |+++-+++... ....++++.|+ ++|
T Consensus 272 ~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~--------~~~~~~~~~l~~~~g 343 (389)
T PRK05957 272 YAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD--------LNDFELVKQLIREYR 343 (389)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCC--------CChHHHHHHHHHHCC
Confidence 011 0122334444332111 122 44444555322 12556888887 589
Q ss_pred ceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 772 VYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 772 vlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
|++.|+ ++.+|+.... .+++++++.+++|.+.++++
T Consensus 344 v~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 344 VAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred EEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHhh
Confidence 999983 2468887644 47889999999998888764
No 190
>PRK03321 putative aminotransferase; Provisional
Probab=99.02 E-value=1.5e-08 Score=112.76 Aligned_cols=168 Identities=13% Similarity=0.149 Sum_probs=107.9
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHh--cCCcEEEeecccCcccCCcc-chhcccCCCCcEE---Eeccccc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQN--RKIPVIFDEVFTGFWRLGVE-TTADLLGCVPDIA---CYGKLLT 692 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~--~gilLI~DEV~TGfGRtG~~-~a~e~~gv~PDiv---tlgKgLg 692 (818)
+..+|++... +...|.+.+ .+++.++|++ +|+++|+||++..|-..+.. .....+.-.++++ +|||.+|
T Consensus 145 ~~~~v~l~~p-~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 219 (352)
T PRK03321 145 RTRLIFVCNP-NNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYG 219 (352)
T ss_pred CCCEEEEeCC-CCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhh
Confidence 3445555543 777888875 4455666655 69999999999877444432 1222223345655 6899998
Q ss_pred -CCccccceeecchHHHhhccCChH--------------------HH----------HHHHHHHHHcCCCeeEEEeeeeE
Q 003466 693 -GGVIPLAATLATNAVFDSFVGDSK--------------------LW----------DLELIQQISSHRTVQRVVALGTL 741 (818)
Q Consensus 693 -gGy~PlsAvl~~~~i~~~l~~~~~--------------------~~----------~~~l~~~l~~~~~v~~vrg~Gl~ 741 (818)
.| +.+|.+++++++++.+..... .+ ...+.+.++..+. ......|.+
T Consensus 220 ~~G-lRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~~g~~ 297 (352)
T PRK03321 220 LAG-LRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAGW-TVPPSQANF 297 (352)
T ss_pred hHH-HhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCCCE
Confidence 67 688999999999887643211 00 0112333444432 112234666
Q ss_pred EEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 742 CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 742 ~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+-+.+... +..+++.|.++||++.+.+ +.||+.. .++++.++++++|++++.
T Consensus 298 i~i~l~~~----------~~~~~~~l~~~gI~v~~~~~~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 298 VWLPLGER----------TADFAAAAAEAGVVVRPFAGEGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred EEEeCCCC----------HHHHHHHHHHCCEEEEccCCCcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 65655321 4578889999999999864 5688885 578999999999988754
No 191
>PRK08068 transaminase; Reviewed
Probab=99.02 E-value=6.3e-08 Score=109.51 Aligned_cols=300 Identities=11% Similarity=0.040 Sum_probs=167.1
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc--cccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG--HVMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~--~~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e 475 (818)
.+||+..+. .-... +|.+.+++.+.++... .+....+..+...++++.+....+.+ ..+ .++.+++|+++..
T Consensus 33 ~~i~l~~~~---p~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~ 108 (389)
T PRK08068 33 DVINLGQGN---PDQPT-PEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLV 108 (389)
T ss_pred CeEEecCCC---CCCCC-CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence 567776642 22345 7889999998876421 11111233456666777665433321 124 6888888889888
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.++... -..| ..|+..+-+|.+.... +...|..
T Consensus 109 ~~~~~~-----~~~g----------------d~vlv~~P~y~~~~~~-~~~~g~~------------------------- 141 (389)
T PRK08068 109 ELPQCL-----MNPG----------------DTILVPDPGYPDYLSG-VALARAQ------------------------- 141 (389)
T ss_pred HHHHHh-----CCCC----------------CEEEEcCCCCcchHHH-HHhcCCE-------------------------
Confidence 776654 1122 3577777777543221 1111111
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCC
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALII-EPVVHAAGG 634 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG 634 (818)
.+.+|..- + + .|. .| .+.+++.+. .++.+|++ .| ++-.|
T Consensus 142 -----~~~i~~~~--------~---~----~~~--~d--------~~~l~~~~~--------~~~~~v~l~~P--~NPTG 181 (389)
T PRK08068 142 -----FETMPLIA--------E---N----NFL--PD--------YTKIPEEVA--------EKAKLMYLNYP--NNPTG 181 (389)
T ss_pred -----EEEeeccc--------c---c----CCC--CC--------HHHHHHhcc--------ccceEEEEECC--CCCCC
Confidence 01111000 0 0 000 00 134444442 13444444 46 67778
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc-c-chhcccCCCC---cEEEeccccc-CCccccceeecchHHH
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-E-TTADLLGCVP---DIACYGKLLT-GGVIPLAATLATNAVF 708 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~-~a~e~~gv~P---DivtlgKgLg-gGy~PlsAvl~~~~i~ 708 (818)
.+. +.+-+++|.++|++||+++|+||++..|...+. . ......+..+ .+-+|||.+| .| +-+|.++++++++
T Consensus 182 ~~~-s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~l~ 259 (389)
T PRK08068 182 AVA-TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAG-WRVAFAVGNESVI 259 (389)
T ss_pred CcC-CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCcc-ceeEeEecCHHHH
Confidence 766 889999999999999999999999976644442 1 1112222222 2348999997 67 7889999999888
Q ss_pred hhccCChH----------------HH----------H-------HHHHHHHHcCCCeeEEEeee-eEEEEEEecCcccCC
Q 003466 709 DSFVGDSK----------------LW----------D-------LELIQQISSHRTVQRVVALG-TLCAIELQAAGCNAG 754 (818)
Q Consensus 709 ~~l~~~~~----------------~~----------~-------~~l~~~l~~~~~v~~vrg~G-l~~~iel~~~~~~~~ 754 (818)
+.+..... .+ . +.+.+.++.++. .-....| .++-+.+...
T Consensus 260 ~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~~~~g~~~~~v~~~~~----- 333 (389)
T PRK08068 260 EAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGW-EVDAPKGSFFAWMPVPKG----- 333 (389)
T ss_pred HHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCeeEEEEEECCCC-----
Confidence 76532100 00 0 112333444432 2223344 4444555322
Q ss_pred CchHHHHHHHHHHHh-CCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 755 YGSLYAASLLKKLRE-DGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 755 ~~~~~a~~~~~~l~e-~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
..+..+++.|++ +||++.|+ .+.+|++.. ..++.+.+.+++|.+
T Consensus 334 ---~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 334 ---YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred ---CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 124578889986 69999872 257888774 456677777776654
No 192
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.01 E-value=7.9e-09 Score=116.96 Aligned_cols=139 Identities=12% Similarity=0.106 Sum_probs=91.6
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCcc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVI 696 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~ 696 (818)
+..+|++|.. .+..|.+.+ +++|.++|+++|+++|+||+++ .+-.+... .+| .|++ +++|.++|.-.
T Consensus 146 ~tklV~lesp-~NptG~v~d----l~~I~~la~~~g~~vivD~a~a-~~~~~~pl---~~g--~Div~~S~sK~l~g~g~ 214 (386)
T PRK06767 146 NTKLIFVETP-INPTMKLID----LKQVIRVAKRNGLLVIVDNTFC-SPYLQRPL---ELG--CDAVVHSATKYIGGHGD 214 (386)
T ss_pred CceEEEEeCC-CCCCceecC----HHHHHHHHHHcCCEEEEECCCc-ccccCCch---hcC--CcEEEecCcceecCCCC
Confidence 4678899976 777787775 8999999999999999999984 22222211 123 4776 45699987225
Q ss_pred cc-ceeecchHHHhhccCC------h---H---------------H------HHHHHHHHHHcCCCeeEEE---------
Q 003466 697 PL-AATLATNAVFDSFVGD------S---K---------------L------WDLELIQQISSHRTVQRVV--------- 736 (818)
Q Consensus 697 Pl-sAvl~~~~i~~~l~~~------~---~---------------~------~~~~l~~~l~~~~~v~~vr--------- 736 (818)
++ |+++++++.++.+... . . . ....+.+.|+++|.|..|.
T Consensus 215 ~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~ 294 (386)
T PRK06767 215 VVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASR 294 (386)
T ss_pred ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHH
Confidence 65 6788888766543210 0 0 1 1123456678888877655
Q ss_pred ---eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEe
Q 003466 737 ---ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMR 775 (818)
Q Consensus 737 ---g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~ 775 (818)
+.|.|+.+++.... +.+.+|.+.|...++.+.
T Consensus 295 ~~~~~gg~vsf~l~~~~-------~~~~~f~~~l~~~~~~~s 329 (386)
T PRK06767 295 QMKRGGGVISFSIKGGK-------EETQAFINDLHFITIAVS 329 (386)
T ss_pred hCCCCCceEEEEEcCCH-------HHHHHHHHhCCccEEecC
Confidence 67889999986331 346678888876665554
No 193
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.00 E-value=4.6e-08 Score=110.91 Aligned_cols=291 Identities=16% Similarity=0.137 Sum_probs=181.9
Q ss_pred CHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCCC-CCc-EEEeCChhHHHHHHHHHHHHHhhhccccccc
Q 003466 418 QIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKGW-ASR-AYFSDNGSTAIEIALKMAFRKFSFDHEVLVD 494 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~~-l~~-v~f~~SGseA~e~ALklA~r~~t~~~G~~~~ 494 (818)
++.+.+|+.+++.... ++....+.-+....+++++....+-.. .+. |+.++++++|+-.++... -..|+
T Consensus 43 p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~-----~~pGD--- 114 (393)
T COG0436 43 PEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLAL-----LNPGD--- 114 (393)
T ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHh-----cCCCC---
Confidence 6789999999998764 443445667778888888888654210 124 999999999999998876 22332
Q ss_pred ccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecC--c-chhhhh
Q 003466 495 FLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSL--P-EWLYSK 571 (818)
Q Consensus 495 ~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~--P-~~~~~~ 571 (818)
.||..+-+|-........+++... .+++ + ..|
T Consensus 115 -------------eVlip~P~Y~~y~~~~~~~gg~~v-----------------------------~v~l~~~~~~f--- 149 (393)
T COG0436 115 -------------EVLIPDPGYPSYEAAVKLAGGKPV-----------------------------PVPLDEEENGF--- 149 (393)
T ss_pred -------------EEEEeCCCCcCHHHHHHhcCCEEE-----------------------------EEeCCcCccCC---
Confidence 588888888654322222222110 0000 0 011
Q ss_pred ccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCCcccCCHHHHHHHHHHH
Q 003466 572 IVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALII-EPVVHAAGGMHMVDPLFQRILVKEC 650 (818)
Q Consensus 572 ~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG~~~~p~~fl~~LreLc 650 (818)
..| .+.|++.+. + ++.+|++ -| .+-.|.+. +++.+++|.++|
T Consensus 150 --------~~d------------------~~~l~~~i~-------~-ktk~i~ln~P--~NPTGav~-~~~~l~~i~~~a 192 (393)
T COG0436 150 --------KPD------------------LEDLEAAIT-------P-KTKAIILNSP--NNPTGAVY-SKEELKAIVELA 192 (393)
T ss_pred --------cCC------------------HHHHHhhcC-------c-cceEEEEeCC--CCCcCcCC-CHHHHHHHHHHH
Confidence 011 255666664 2 5556666 55 67777766 899999999999
Q ss_pred HhcCCcEEEeecccCcccCCc-cc-hhcccCC---CCcEEEeccccc-CCccccceeecc-hHHHhhccCC-------hH
Q 003466 651 QNRKIPVIFDEVFTGFWRLGV-ET-TADLLGC---VPDIACYGKLLT-GGVIPLAATLAT-NAVFDSFVGD-------SK 716 (818)
Q Consensus 651 ~~~gilLI~DEV~TGfGRtG~-~~-a~e~~gv---~PDivtlgKgLg-gGy~PlsAvl~~-~~i~~~l~~~-------~~ 716 (818)
++||+.+|.|||..+|--.|. .- ..+..+- .--+-.|||..+ -| +-+|.++++ +++++.+..- ..
T Consensus 193 ~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtG-wRvG~~v~~~~~l~~~~~~~~~~~~~~~~ 271 (393)
T COG0436 193 REHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTG-WRIGWVVGPPEELIAALRKLKSYLTSCAP 271 (393)
T ss_pred HHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccc-cceeEeecChHHHHHHHHHHHHhcccCCC
Confidence 999999999999999977774 22 2222221 112337999887 45 788889998 7676654310 00
Q ss_pred ---------------H--H--------H---HHHHHHHHcCCCeeEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHH
Q 003466 717 ---------------L--W--------D---LELIQQISSHRTVQRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKL 767 (818)
Q Consensus 717 ---------------~--~--------~---~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l 767 (818)
. + . +-+.+.+.+.+.+..+. ..|.+..+--.+.. .....|+.+|
T Consensus 272 ~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~-------~d~~~f~~~L 344 (393)
T COG0436 272 TPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL-------LDSEEFAKKL 344 (393)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-------CCHHHHHHHH
Confidence 0 0 0 11233445555455455 45666665433321 2256788888
Q ss_pred Hh-CCceEeec---C-----CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 768 RE-DGVYMRPL---G-----NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 768 ~e-~Gvlv~p~---g-----~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
++ .||.+.|+ | +.+|++ +..++++++++++++.+.++..
T Consensus 345 l~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 345 LEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred HHhCCEEEecccccCCCCCCCeEEEE--EecCHHHHHHHHHHHHHHHHhc
Confidence 75 58999983 2 356664 4566699999999999887653
No 194
>PLN02242 methionine gamma-lyase
Probab=98.99 E-value=2.6e-08 Score=113.77 Aligned_cols=172 Identities=19% Similarity=0.256 Sum_probs=109.0
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.+++++||++|+..++.... +.| ..||.....|.+
T Consensus 73 ~~~Pt~~~LE~~lA~l~g~---~~~l~~~sG~~Ai~~al~al~-----~~G----------------D~Vl~~~~~Y~~- 127 (418)
T PLN02242 73 HFNPTVLNLGRQMAALEGT---EAAYCTASGMSAISSVLLQLC-----SSG----------------GHVVASNTLYGG- 127 (418)
T ss_pred CCChhHHHHHHHHHHHhCC---CeEEEEccHHHHHHHHHHHHh-----CCC----------------CEEEEcCCcHHH-
Confidence 4578899999999999873 688899999999999998652 222 256666655533
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
+...+...... . .+.. +.|.|.. +
T Consensus 128 ~~~~~~~~~~~---~---------~G~~------------------------------~~~~d~~-------d------- 151 (418)
T PLN02242 128 THALLAHFLPR---K---------CNIT------------------------------TTFVDIT-------D------- 151 (418)
T ss_pred HHHHHHHhhhh---c---------cCce------------------------------EEEcCCC-------C-------
Confidence 21111100000 0 0000 0011110 0
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. +.+..+|++|.. ++..|.+.+ +++|.++|++||+++|+||+++.+ .... ..+|
T Consensus 152 -~e~l~~~i~-------~~~tklV~lesp-~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~-~~~~----~~~g 213 (418)
T PLN02242 152 -LEAVKKAVV-------PGKTKVLYFESI-SNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPM-VLSP----ARLG 213 (418)
T ss_pred -HHHHHHhcC-------cCCCEEEEEecC-CCCCCcccC----HHHHHHHHHHhCCEEEEECCCCcc-CCCH----HHcC
Confidence 145666553 224789999986 787887664 899999999999999999999643 2211 1234
Q ss_pred CCCcEE--EecccccCCcccc-ceeecchHHHhhcc
Q 003466 680 CVPDIA--CYGKLLTGGVIPL-AATLATNAVFDSFV 712 (818)
Q Consensus 680 v~PDiv--tlgKgLggGy~Pl-sAvl~~~~i~~~l~ 712 (818)
.|++ +++|.++|+-..+ |++++++++++.+.
T Consensus 214 --~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~ 247 (418)
T PLN02242 214 --ADVVVHSISKFISGGADIIAGAVCGPAELVNSMM 247 (418)
T ss_pred --CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHH
Confidence 4665 7999998643454 77888888766543
No 195
>PRK09148 aminotransferase; Validated
Probab=98.99 E-value=7.5e-08 Score=109.63 Aligned_cols=313 Identities=11% Similarity=0.037 Sum_probs=176.5
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc--ccccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF--GHVMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~--~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e 475 (818)
.+||+..| ...++. .+.+.+++.+.++.- ..+....+..+....+++.+....|.. .-+ .+++++++++|..
T Consensus 31 ~~i~l~~~--~p~~~~--~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 106 (405)
T PRK09148 31 DIIDLGMG--NPDLPT--PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA 106 (405)
T ss_pred CeEEcCCC--CCCCCC--CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 67887653 222332 577888888766431 111112233456667777776543321 013 6999999999988
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.++.... ..| ..|+..+-+|.+....... .|..
T Consensus 107 ~~~~~l~-----~~g----------------d~Vl~~~P~y~~~~~~~~~-~g~~------------------------- 139 (405)
T PRK09148 107 NMAQAIT-----APG----------------DVILCPNPSYPIHAFGFIM-AGGV------------------------- 139 (405)
T ss_pred HHHHHhc-----CCC----------------CEEEEcCCCCcccHHHHHh-cCCE-------------------------
Confidence 8877651 222 3688888888774322111 1111
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
.+++|... + .++ .+.+++.+.. ..+.....++.-| ++-.|.
T Consensus 140 -----v~~v~~~~--------~--~~~------------------~~~l~~~~~~----~~~~~~~v~l~~P--~NPtG~ 180 (405)
T PRK09148 140 -----IRSVPAEP--------D--EEF------------------FPALERAVRH----SIPKPIALIVNYP--SNPTAY 180 (405)
T ss_pred -----EEEEeCCC--------C--CCC------------------ccCHHHHHhh----ccccceEEEEeCC--CCCCCc
Confidence 11111000 0 000 0223334432 1122233444445 677787
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch-hcccCCCCc----EEEeccccc-CCccccceeecchHHHh
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT-ADLLGCVPD----IACYGKLLT-GGVIPLAATLATNAVFD 709 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a-~e~~gv~PD----ivtlgKgLg-gGy~PlsAvl~~~~i~~ 709 (818)
+. +.+-+++|.++|++||+++|.||++..|--.+..+. ...+.-.+| +-+|||.+| -| +-+|.+++++++++
T Consensus 181 ~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pG-lR~G~~v~~~~~i~ 258 (405)
T PRK09148 181 VA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAG-WRMGFAVGNERLIA 258 (405)
T ss_pred CC-CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcc-hheeeeeCCHHHHH
Confidence 76 789999999999999999999999976522222111 111111123 347999998 67 78899999998887
Q ss_pred hccCCh--------H--------HHH-----------------HHHHHHHHcCCCeeEEEe-eeeEEEEEEecCcccCCC
Q 003466 710 SFVGDS--------K--------LWD-----------------LELIQQISSHRTVQRVVA-LGTLCAIELQAAGCNAGY 755 (818)
Q Consensus 710 ~l~~~~--------~--------~~~-----------------~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~ 755 (818)
.+.... . .+. +.+.+.+++++. .-... .|+++-+.+...-
T Consensus 259 ~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~p~~g~f~~~~l~~~~----- 332 (405)
T PRK09148 259 ALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGW-DIPPPAASMFAWAPIPEAF----- 332 (405)
T ss_pred HHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccCCCCeeEEEEEECCCcc-----
Confidence 653210 0 110 112333444432 21222 3445555543210
Q ss_pred chHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhH
Q 003466 756 GSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVE 812 (818)
Q Consensus 756 ~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~ 812 (818)
+......+++.|+ ++||.+.|+ .+.+|+... .+++++++++++|.+++.+..++.
T Consensus 333 ~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~~~ 395 (405)
T PRK09148 333 RHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADETL 395 (405)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012356777766 789999983 257888775 578999999999999998877553
No 196
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=98.99 E-value=1.5e-08 Score=111.98 Aligned_cols=161 Identities=16% Similarity=0.165 Sum_probs=104.9
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCc-EE--Eeccccc-CCcc
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPD-IA--CYGKLLT-GGVI 696 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD-iv--tlgKgLg-gGy~ 696 (818)
+.+++.| +...|..+ +.+.+++|.++|++||+++|+||++.+|....... ...+-.++ ++ +++|.+| .| +
T Consensus 128 ~v~i~~p--~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~~i~~~S~SK~~g~~G-~ 201 (330)
T TIGR01140 128 VLVLCNP--NNPTGRLI-PPETLLALAARLRARGGWLVVDEAFIDFTPDASLA--PQAARFPGLVVLRSLTKFFGLAG-L 201 (330)
T ss_pred EEEEeCC--CCCCCCCC-CHHHHHHHHHHhHhcCCEEEEECcccccCCccchh--hHhccCCCEEEEEecchhhcCch-h
Confidence 4556666 56667655 89999999999999999999999998774321111 11122233 33 8999998 77 7
Q ss_pred ccceeecchHHHhhccCChH------------------------------HHHHHHHHHHHcCCCeeEEEeeeeEEEEEE
Q 003466 697 PLAATLATNAVFDSFVGDSK------------------------------LWDLELIQQISSHRTVQRVVALGTLCAIEL 746 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~~~~------------------------------~~~~~l~~~l~~~~~v~~vrg~Gl~~~iel 746 (818)
.+|++++++++++.+..... ...+.+.+.+++++.+....+.|.++-+.+
T Consensus 202 R~G~i~~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~ 281 (330)
T TIGR01140 202 RLGFVVAHPALLARLREALGPWTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRT 281 (330)
T ss_pred hhhheeCCHHHHHHHHhcCCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEc
Confidence 99999999998876643210 011223445566664433334455555544
Q ss_pred ecCcccCCCchHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHH
Q 003466 747 QAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 747 ~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l 801 (818)
.. ...+++.|.++||++.|+ ++.+|+.... ..++ ++++++|
T Consensus 282 ~~-----------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~--~~~~-~~~~~~l 329 (330)
T TIGR01140 282 PD-----------AAALHEALARRGILIRDFDNFPGLDPRYLRFALPT--DEEN-DRLEEAL 329 (330)
T ss_pred CC-----------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC--HHHH-HHHHHhh
Confidence 21 346889999999999983 1578887753 3344 7766655
No 197
>PRK08912 hypothetical protein; Provisional
Probab=98.98 E-value=1.1e-07 Score=107.30 Aligned_cols=305 Identities=13% Similarity=0.093 Sum_probs=169.8
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e~ 476 (818)
..||+..|.-. .+ . ++.+.+++.+.+... ..+....+..+....+++.+.+..+.. .-+ .+++++++++|...
T Consensus 27 ~~i~l~~g~p~--~~-~-p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 102 (387)
T PRK08912 27 GAINLGQGFPD--DP-G-PEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA 102 (387)
T ss_pred CeEEccCCCCC--CC-C-CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH
Confidence 45666665432 33 3 688888888776431 112212233456667777776543311 124 79999999999988
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
++.... ..| ..|+..+-+|.+... .+...|...
T Consensus 103 ~~~~~~-----~~g----------------d~Vlv~~p~y~~~~~-~~~~~g~~~------------------------- 135 (387)
T PRK08912 103 ALLALV-----EPG----------------DEVVLFQPLYDAYLP-LIRRAGGVP------------------------- 135 (387)
T ss_pred HHHHhc-----CCC----------------CEEEEeCCCchhhHH-HHHHcCCEE-------------------------
Confidence 777541 112 257777777755322 111111110
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEE-EEEccccccCCCc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGA-LIIEPVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV~~g~gG~ 635 (818)
..++++. ++ +. -+ .+.+++.+. .++.+ ++..| ++-.|.
T Consensus 136 ---~~~~~~~--------------~~----~~--~~--------~~~l~~~~~--------~~~~~v~l~~p--~NPtG~ 174 (387)
T PRK08912 136 ---RLVRLEP--------------PH----WR--LP--------RAALAAAFS--------PRTKAVLLNNP--LNPAGK 174 (387)
T ss_pred ---EEEecCc--------------cc----Cc--CC--------HHHHHHHhC--------ccceEEEEeCC--CCCcCc
Confidence 0111100 00 00 00 144555553 13334 44445 677787
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc--hhcccCCC-CcEE--Eeccccc-CCccccceeecchHHHh
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET--TADLLGCV-PDIA--CYGKLLT-GGVIPLAATLATNAVFD 709 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~--a~e~~gv~-PDiv--tlgKgLg-gGy~PlsAvl~~~~i~~ 709 (818)
+. +.+-+++|.++|++||+++|+||++..|--.+..+ .....+.. .+++ ++||.+| .| +-+|.+++++++++
T Consensus 175 ~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-lRiG~~~~~~~~~~ 252 (387)
T PRK08912 175 VF-PREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTG-WKVGFVCAAPPLLR 252 (387)
T ss_pred cc-CHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcC-ceeEEEecCHHHHH
Confidence 66 67889999999999999999999996552222111 11111221 2233 7899998 78 78999999998877
Q ss_pred hccCCh--------H--------HH-----------------HHHHHHHHHcCCCeeEEEee-eeEEEEEEecCcccCCC
Q 003466 710 SFVGDS--------K--------LW-----------------DLELIQQISSHRTVQRVVAL-GTLCAIELQAAGCNAGY 755 (818)
Q Consensus 710 ~l~~~~--------~--------~~-----------------~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~ 755 (818)
.+.... . .+ .+.+.+.++.++ +.-.... |.++-+.+.... .
T Consensus 253 ~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~l~~~l~~~~--~-- 327 (387)
T PRK08912 253 VLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQGTYFLTVDLAPLG--L-- 327 (387)
T ss_pred HHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEecccccC--C--
Confidence 653210 0 00 011223344443 2112222 445555554310 0
Q ss_pred chHHHHHHHHHHH-hCCceEeec---------CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 756 GSLYAASLLKKLR-EDGVYMRPL---------GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 756 ~~~~a~~~~~~l~-e~Gvlv~p~---------g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
......+++.|+ ++||++.|+ .+.+|++... .++++++.+++|.++++
T Consensus 328 -~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 328 -AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAARR 385 (387)
T ss_pred -CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 012456788876 579999872 2567877664 58899999999988765
No 198
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=98.98 E-value=1.1e-07 Score=107.24 Aligned_cols=299 Identities=12% Similarity=0.060 Sum_probs=167.5
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc--cccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG--HVMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~--~~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e 475 (818)
..+|+.+|. ..++ - .+.+.+++.+.+.... .+....+..+....+++.+....+.+ ..+ .+++++++++|..
T Consensus 30 ~~~~l~~~~--~~~~-~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~ 105 (383)
T TIGR03540 30 DVISLGIGD--PDLP-T-PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIA 105 (383)
T ss_pred CeEEeCCCC--CCCC-C-CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHH
Confidence 566766643 2233 2 5788999888765321 11111233455666777666543321 013 5888888899988
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.+++.. -..| ..|++.+-+|.+....+.. .|..
T Consensus 106 ~~~~~~-----~~~g----------------d~vlv~~P~y~~~~~~~~~-~G~~------------------------- 138 (383)
T TIGR03540 106 HIPLAF-----VNPG----------------DIVLVPDPGYPVYRIGTLF-AGGE------------------------- 138 (383)
T ss_pred HHHHHh-----CCCC----------------CEEEEeCCCCcchHHHHHh-cCCE-------------------------
Confidence 888765 1222 3688888888764332211 1111
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEc-cccccCCC
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIE-PVVHAAGG 634 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvE-PV~~g~gG 634 (818)
.+.+|... +..+. .+ .+.+++.+. .++.+|++- | ++-.|
T Consensus 139 -----v~~v~~~~---------------~~g~~--~d--------~~~l~~~~~--------~~~~~v~i~~P--~NPtG 178 (383)
T TIGR03540 139 -----PYEMPLKE---------------ENGFL--PD--------FDAIPEDIA--------KKAKLMFINYP--NNPTG 178 (383)
T ss_pred -----EEEEecCc---------------ccCCc--cC--------HHHHHhhcc--------ccceEEEEeCC--CCCcC
Confidence 01111000 00000 00 134444443 244566655 5 67788
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hh-ccc---CCCCcEEEeccccc-CCccccceeecchHHH
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TA-DLL---GCVPDIACYGKLLT-GGVIPLAATLATNAVF 708 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~-e~~---gv~PDivtlgKgLg-gGy~PlsAvl~~~~i~ 708 (818)
... +.+-+++|.++|++||+++|.||++..+-..+... .. ... +..-.+.+|||.+| .| +-+|.++++++++
T Consensus 179 ~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~G-lRiG~~i~~~~l~ 256 (383)
T TIGR03540 179 AVA-PLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTG-WRIGMAVGNADLI 256 (383)
T ss_pred ccC-CHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCcc-ceeeEEeCCHHHH
Confidence 776 89999999999999999999999997553223211 11 111 11223458999996 56 6888899999887
Q ss_pred hhccCCh--------H--------HH-------H----------HHHHHHHHcCCCeeEEEe-eeeEEEEEEecCcccCC
Q 003466 709 DSFVGDS--------K--------LW-------D----------LELIQQISSHRTVQRVVA-LGTLCAIELQAAGCNAG 754 (818)
Q Consensus 709 ~~l~~~~--------~--------~~-------~----------~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~ 754 (818)
+.+.... . .+ . +.+.+.|++++ +.-+.. .|.++-+.+.+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~l~~~----- 330 (383)
T TIGR03540 257 AGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDVEKPKATFYVWVPVPEG----- 330 (383)
T ss_pred HHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEecCCCcceEEEEECCCC-----
Confidence 7553210 0 00 0 11233344443 221222 244455555322
Q ss_pred CchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 755 YGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 755 ~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
..+..++..|+ ++||++.|+ .+.+|+... .+++++.+.+++|.
T Consensus 331 ---~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 331 ---YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIK 381 (383)
T ss_pred ---CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHHh
Confidence 12456888875 689999973 246888775 56778888777765
No 199
>PRK07683 aminotransferase A; Validated
Probab=98.98 E-value=1.8e-07 Score=105.88 Aligned_cols=305 Identities=11% Similarity=0.049 Sum_probs=167.6
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e~ 476 (818)
.++|+..|.. .++ . .+.+.+++.+.++... .+....+..+...++++.+....+-+ ..+ .+++++++++|+..
T Consensus 29 ~~i~l~~~~p--~~~-~-~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 29 NLISLTIGQP--DFP-T-PSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CeEEecCCCC--CCC-C-CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 4567665432 122 2 5788999998876432 11111234455666777665432211 124 79999999999998
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
+++... ..| ..|+.-.-+|.+..... ...|...
T Consensus 105 ~~~~l~-----~~g----------------d~Vl~~~p~y~~~~~~~-~~~g~~~------------------------- 137 (387)
T PRK07683 105 AFRTIL-----EPG----------------TEVILPAPIYPGYEPII-RLCGAKP------------------------- 137 (387)
T ss_pred HHHHhC-----CCC----------------CEEEEcCCCccchHHHH-HHcCCEE-------------------------
Confidence 887651 122 25777777777643222 1111110
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMH 636 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~ 636 (818)
+.+|.. -++ +. -+ .+.+++.+. .++.++++.-. ++-.|..
T Consensus 138 -----~~~~~~------------~~~----~~--~~--------~~~l~~~~~--------~~~~~i~i~~p-~NPtG~~ 177 (387)
T PRK07683 138 -----VFIDTR------------STG----FR--LT--------AEALENAIT--------EKTRCVVLPYP-SNPTGVT 177 (387)
T ss_pred -----EEeecC------------ccc----CC--CC--------HHHHHHhcC--------cCceEEEEeCC-CCCCCcC
Confidence 011100 000 00 00 134555443 12344444432 6677776
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch-hcccCCCCc-E--EEeccccc-CCccccceeecchHHHhhc
Q 003466 637 MVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT-ADLLGCVPD-I--ACYGKLLT-GGVIPLAATLATNAVFDSF 711 (818)
Q Consensus 637 ~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a-~e~~gv~PD-i--vtlgKgLg-gGy~PlsAvl~~~~i~~~l 711 (818)
. +.+.+++|.++|+++|+++|+||++..+-..+.... ....+.... + .+|||.+| .| +-+|.+++++++++.+
T Consensus 178 ~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pG-lRiG~i~~~~~l~~~~ 255 (387)
T PRK07683 178 L-SKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTG-WRIGFLFAPSYLAKHI 255 (387)
T ss_pred C-CHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCcc-ceeEEEEcCHHHHHHH
Confidence 6 888999999999999999999999976622222111 111122112 2 37999998 77 7999999999887765
Q ss_pred cCC--------hH--------HHH-----------------HHHHHHHHcCCCeeEEEeee-eEEEEEEecCcccCCCch
Q 003466 712 VGD--------SK--------LWD-----------------LELIQQISSHRTVQRVVALG-TLCAIELQAAGCNAGYGS 757 (818)
Q Consensus 712 ~~~--------~~--------~~~-----------------~~l~~~l~~~~~v~~vrg~G-l~~~iel~~~~~~~~~~~ 757 (818)
... .. .+. +.+.+.+...+ +.-....| .++-+.+....
T Consensus 256 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------- 327 (387)
T PRK07683 256 LKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVEKPTGAFYLFPSIGHFT------- 327 (387)
T ss_pred HHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCeeEEEEEecccCC-------
Confidence 321 00 110 01122233332 22122333 33333333210
Q ss_pred HHHHHHHHH-HHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 758 LYAASLLKK-LREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 758 ~~a~~~~~~-l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
.....++.. +.++||.+.|+ .+.+|+... .+++++.+++++|.+.+.+
T Consensus 328 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 328 MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 113346655 56789999873 257777665 5788999999999887753
No 200
>PRK09105 putative aminotransferase; Provisional
Probab=98.98 E-value=7.6e-08 Score=108.32 Aligned_cols=288 Identities=14% Similarity=0.098 Sum_probs=167.1
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
.++|+..+. +.+| - +|.+.+|+.+.+.....+. .+...+|-+.+++..+-. -+.|++++++++|...++.
T Consensus 44 ~~i~l~~~~--~~~~-~-~~~~~~a~~~~~~~~~~Y~-----~~~~~~Lr~aia~~~~v~-~e~I~it~Gs~~ai~~~~~ 113 (370)
T PRK09105 44 GAVFLNANE--CPLG-P-SPAARDAAARSAALSGRYD-----LELEDDLRTLFAAQEGLP-ADHVMAYAGSSEPLNYAVL 113 (370)
T ss_pred CcEEecCCC--CCCC-C-CHHHHHHHHHHHHHhcCCC-----CchHHHHHHHHHHHhCcC-hhhEEEcCChHHHHHHHHH
Confidence 566665532 2344 2 6899999988775433221 122556777777766533 3689999999999998887
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
... ..| .+|+..+-+|.+.... ....|.+.
T Consensus 114 ~l~-----~~g----------------d~Vli~~P~y~~~~~~-~~~~g~~~---------------------------- 143 (370)
T PRK09105 114 AFT-----SPT----------------AGLVTADPTYEAGWRA-ADAQGAPV---------------------------- 143 (370)
T ss_pred HHc-----CCC----------------CEEEEeCCChHHHHHH-HHHcCCeE----------------------------
Confidence 551 122 3688887777654321 11111110
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
+.+|... + |. .+ .+.+++.. +.....++..| ++..|.+. +
T Consensus 144 --~~v~~~~--------~--~~---------~d--------~~~l~~~~--------~~~~~v~l~nP--~NPTG~~~-~ 183 (370)
T PRK09105 144 --AKVPLRA--------D--GA---------HD--------VKAMLAAD--------PNAGLIYICNP--NNPTGTVT-P 183 (370)
T ss_pred --EEecCCC--------C--CC---------CC--------HHHHHhcC--------CCCCEEEEeCC--CCCCCcCc-C
Confidence 1111000 0 00 00 12232221 12223555666 67788876 6
Q ss_pred HHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCccccceeecchHHHhhccCCh
Q 003466 640 PLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVIPLAATLATNAVFDSFVGDS 715 (818)
Q Consensus 640 ~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~ 715 (818)
.+.++++.+.|+ +|+++|+||++..|+.. . ...+..+..++++ +|||.+| .| +.+|.+++++++++.+....
T Consensus 184 ~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~-~-s~~~~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~~i~~l~~~~ 259 (370)
T PRK09105 184 RADIEWLLANKP-AGSVLLVDEAYIHFSDA-P-SVVDLVAQRKDLIVLRTFSKLYGMAG-MRLGLAAARPDLLAKLARFG 259 (370)
T ss_pred HHHHHHHHHhCC-CCcEEEEECchHHhccC-c-chHHHHhhCCCEEEEecccHhhcCCc-cceeeeecCHHHHHHHHhcC
Confidence 777788877764 59999999999767431 1 1122222245544 7899997 67 78999999998887654321
Q ss_pred H-------------HH----------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHH
Q 003466 716 K-------------LW----------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKK 766 (818)
Q Consensus 716 ~-------------~~----------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~ 766 (818)
. .+ .+.+.+.++.++. .-....|.++.+.+..+ ...+++.
T Consensus 260 ~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~~f~~~~~~~~----------~~~l~~~ 328 (370)
T PRK09105 260 HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQANCFMVDVKRP----------AKAVADA 328 (370)
T ss_pred CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCCcEEEEeCCCC----------HHHHHHH
Confidence 0 00 0122334444432 22233455554544311 4578899
Q ss_pred HHhCCceEee----cCCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 767 LREDGVYMRP----LGNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 767 l~e~Gvlv~p----~g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
|.++||+++. ..+.+|++.. +++++++++++|++.+
T Consensus 329 L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 329 MAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 9999999952 1367888864 5788999998887764
No 201
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=98.97 E-value=2.2e-07 Score=103.92 Aligned_cols=170 Identities=15% Similarity=0.198 Sum_probs=104.4
Q ss_pred cEEEEEE-ccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--Eeccccc-CC
Q 003466 619 CIGALII-EPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLT-GG 694 (818)
Q Consensus 619 ~iAAVIv-EPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLg-gG 694 (818)
++.+|++ .| ++-.|.. .+.+.+++|.++|++||+++|+||++..|-..+..+.........+++ ++||.+| .|
T Consensus 142 ~~k~v~l~~p--~NPTG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 218 (356)
T PRK08056 142 DLDCLFLCTP--NNPTGLL-PERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPG 218 (356)
T ss_pred CCCEEEEeCC--cCCCCCC-CCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcc
Confidence 3445555 45 6778875 489999999999999999999999998773333211111111112233 7999999 78
Q ss_pred ccccceeecc-hHHHhhccCC----h--H--------HH-----H-----------HHHHHHHHcCCCeeEEEeeeeEEE
Q 003466 695 VIPLAATLAT-NAVFDSFVGD----S--K--------LW-----D-----------LELIQQISSHRTVQRVVALGTLCA 743 (818)
Q Consensus 695 y~PlsAvl~~-~~i~~~l~~~----~--~--------~~-----~-----------~~l~~~l~~~~~v~~vrg~Gl~~~ 743 (818)
+.+|.++++ +++++.+... . . .+ . +.+.+.++.++.+.-....|.++-
T Consensus 219 -~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~ 297 (356)
T PRK08056 219 -LRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLF 297 (356)
T ss_pred -hhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEE
Confidence 799999874 5665544321 0 0 00 0 112333444443322222344443
Q ss_pred EEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 744 IELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 744 iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+.+..+ ...+++.|.++||+++++ ++.+|++.. ++++.+.++++|++.+
T Consensus 298 ~~~~~~----------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 298 LRCERP----------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred EEcCCC----------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 433211 346888999999999873 146888753 6788899998887764
No 202
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=98.97 E-value=1.6e-08 Score=114.14 Aligned_cols=225 Identities=17% Similarity=0.119 Sum_probs=135.9
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.+++++||++|+..++.... +.| ..||+.+..||+.
T Consensus 47 ~gnPt~~~lE~~lA~l~g~---~~~~~~~sG~~Ai~~al~all-----~~G----------------D~Vl~~~~~y~~t 102 (377)
T TIGR01324 47 RGTLTHFALQDAMCELEGG---AGCYLYPSGLAAVTNSILAFV-----KAG----------------DHVLMVDSAYEPT 102 (377)
T ss_pred CCCccHHHHHHHHHHHhCC---CcEEEECcHHHHHHHHHHHhc-----CCC----------------CEEEEcCCCcHHH
Confidence 3467788999999998873 688899999999999997541 222 3688888888874
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
....-... + + .+.. +.+.|. .+
T Consensus 103 ~~~~~~~~--~--~----------~gi~------------------------------v~~~d~-------~~------- 124 (377)
T TIGR01324 103 RYFCDIVL--K--R----------MGVD------------------------------ITYYDP-------LI------- 124 (377)
T ss_pred HHHHHHHH--H--h----------cCcE------------------------------EEEECC-------CC-------
Confidence 31100000 0 0 0000 001111 00
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .++.+|++|.+ .+..|.+. .+++|.++|++||+++|+||++. +|-.+.. ..+
T Consensus 125 -~e~l~~~i~--------~~tklV~lesp-~Np~g~~~----dl~~I~~la~~~g~~livD~t~a-~g~~~~p---l~~- 185 (377)
T TIGR01324 125 -GEDIATLIQ--------PNTKVLFLEAP-SSITFEIQ----DIPAIAKAARNPGIVIMIDNTWA-AGLLFKP---LEH- 185 (377)
T ss_pred -HHHHHHhcC--------CCceEEEEECC-CCCCCcHH----HHHHHHHHHHHcCCEEEEECCCc-cccccCc---ccc-
Confidence 034555553 35679999986 66666554 49999999999999999999994 4444332 123
Q ss_pred CCCcEEEe--cccccCCc-cccceeecchHHHhhccCChH-----------------------HHH------HHHHHHHH
Q 003466 680 CVPDIACY--GKLLTGGV-IPLAATLATNAVFDSFVGDSK-----------------------LWD------LELIQQIS 727 (818)
Q Consensus 680 v~PDivtl--gKgLggGy-~PlsAvl~~~~i~~~l~~~~~-----------------------~~~------~~l~~~l~ 727 (818)
-.|+++. .|.++|-- .=.|+++++++.++.+..... .++ ..+.+.|+
T Consensus 186 -gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~ 264 (377)
T TIGR01324 186 -GVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTLGVRLKQHQESSLAIAKWLS 264 (377)
T ss_pred -CceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4688754 89998520 224567777776654431100 111 12345567
Q ss_pred cCCCeeEEE------------------eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCc
Q 003466 728 SHRTVQRVV------------------ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGV 772 (818)
Q Consensus 728 ~~~~v~~vr------------------g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv 772 (818)
++|.|..|. |.|.|+.|++.... .+.+..|.+.|.-.++
T Consensus 265 ~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~------~~~~~~~~~~l~~~~~ 321 (377)
T TIGR01324 265 EQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT------QKQVHAFLDHLQLFGL 321 (377)
T ss_pred hCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC------HHHHHHHHHhCCcceE
Confidence 777665542 66889999996421 1345667776654333
No 203
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=98.97 E-value=9.5e-08 Score=106.96 Aligned_cols=286 Identities=12% Similarity=0.054 Sum_probs=160.0
Q ss_pred CHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCC-CCcEEEeCChhHHHHHHHHHHHHHhhhccccccccc
Q 003466 418 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGW-ASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFL 496 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~-l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~ 496 (818)
.|.+.+|+.+.. ++.. ....+...++.++|+++++.+. .+.++++.||++|++.++.... ..
T Consensus 17 ~~~~~~a~~~~~---~~~~--~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~-----~~------- 79 (368)
T PRK13479 17 SRTVREAMLRDW---GSWD--DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV-----PR------- 79 (368)
T ss_pred CHHHHHHhCCCC---CCCC--hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc-----CC-------
Confidence 566666666543 2211 0123567788888888876431 1347799999999999998761 11
Q ss_pred CCCccccccceEEEEEcCCCCCCcc-ccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcccc
Q 003466 497 GKDTTEKCIELKVLALKGSYHGDTL-GAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEH 575 (818)
Q Consensus 497 ~~~~~~~~~r~~II~~~~sYHG~t~-~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~ 575 (818)
..++++...+|.|... ......|.+ ...++.+...
T Consensus 80 ---------~~~vlv~~~~~~~~~~~~~~~~~g~~----------------------------~~~i~~~~~~------- 115 (368)
T PRK13479 80 ---------DGKVLVPDNGAYGARIAQIAEYLGIA----------------------------HVVLDTGEDE------- 115 (368)
T ss_pred ---------CCeEEEEeCCchHHHHHHHHHHcCCc----------------------------EEEEECCCCC-------
Confidence 2356666666665421 111111111 0111111000
Q ss_pred ccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCC
Q 003466 576 KDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKI 655 (818)
Q Consensus 576 ~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gi 655 (818)
..| .+.+++.+.+ + .++..|.+--+ .+..|...+ +++|.++|+++|+
T Consensus 116 ----~~d------------------~~~l~~~l~~-----~-~~~~~v~~~~~-~~~tG~~~~----~~~i~~l~~~~~~ 162 (368)
T PRK13479 116 ----PPD------------------AAEVEAALAA-----D-PRITHVALVHC-ETTTGILNP----LDEIAAVAKRHGK 162 (368)
T ss_pred ----CCC------------------HHHHHHHHHh-----C-CCCcEEEEEcc-cCccccccC----HHHHHHHHHHcCC
Confidence 011 1456666652 1 23333333332 455777776 8999999999999
Q ss_pred cEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCccccceeecchHHHhhccCCh------------------
Q 003466 656 PVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNAVFDSFVGDS------------------ 715 (818)
Q Consensus 656 lLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~i~~~l~~~~------------------ 715 (818)
++|+|.++ +||... ..... ..+|++ ++.|.+.|. .-+|.+++++++.+.+....
T Consensus 163 ~livDa~~-~~g~~~--~~~~~--~~~d~~v~s~~K~l~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T PRK13479 163 RLIVDAMS-SFGAIP--IDIAE--LGIDALISSANKCIEGV-PGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTG 236 (368)
T ss_pred EEEEEccc-ccCCcc--ccccc--cCceEEEecCccccccC-CCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccC
Confidence 99999887 665322 22222 246765 678988653 22577889888765432210
Q ss_pred --------------H----HH-H---------------HHHHHHHHcCCCee--E-EEeeeeEEEEEEecCcccCCCchH
Q 003466 716 --------------K----LW-D---------------LELIQQISSHRTVQ--R-VVALGTLCAIELQAAGCNAGYGSL 758 (818)
Q Consensus 716 --------------~----~~-~---------------~~l~~~l~~~~~v~--~-vrg~Gl~~~iel~~~~~~~~~~~~ 758 (818)
. .+ . +.+.+.+++++... . ......+..+.+.... ..
T Consensus 237 ~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~ 310 (368)
T PRK13479 237 QWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADP------AY 310 (368)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCC------Cc
Confidence 0 01 0 11223333333210 0 0011122333322110 01
Q ss_pred HHHHHHHHHHhCCceEeec----CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 759 YAASLLKKLREDGVYMRPL----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 759 ~a~~~~~~l~e~Gvlv~p~----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
....+.+.|.++||.++++ .+.+|+......+++|+++++++|+++++++.
T Consensus 311 ~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 311 DFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 2456888999999999874 25789987556789999999999999987653
No 204
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=98.96 E-value=1.2e-07 Score=111.42 Aligned_cols=314 Identities=11% Similarity=0.071 Sum_probs=173.1
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIAL 478 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~AL 478 (818)
..|++..|.- +.+|+...+++++++.+++.....+....+..+....+++.+...-+.+ ..+.+++++++++|...++
T Consensus 147 ~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~ 225 (517)
T PRK13355 147 HILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSM 225 (517)
T ss_pred CeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHH
Confidence 5566655432 2456643678999999887654333322334556667777765432211 1357999999999998888
Q ss_pred HHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCc
Q 003466 479 KMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNS 558 (818)
Q Consensus 479 klA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~ 558 (818)
+.. -..| ..|+..+-+|......+. ..|...
T Consensus 226 ~~l-----~~~G----------------d~Vli~~P~y~~y~~~~~-~~g~~~--------------------------- 256 (517)
T PRK13355 226 SAL-----LDDG----------------DEVLIPSPDYPLWTACVN-LAGGTA--------------------------- 256 (517)
T ss_pred HHh-----CCCC----------------CEEEEcCCCCcCHHHHHH-HCCCEE---------------------------
Confidence 765 1222 368888888876543222 212110
Q ss_pred ceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccC
Q 003466 559 KWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMV 638 (818)
Q Consensus 559 ~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~ 638 (818)
+.+|- +.+..|. .| .+.+++.+. +..-+.+|+-| ++-.|.+.
T Consensus 257 ---v~~~~---------------~~~~~~~--~d--------~~~l~~~~~-------~~~k~i~i~nP--~NPTG~v~- 298 (517)
T PRK13355 257 ---VHYRC---------------DEQSEWY--PD--------IDDIRSKIT-------SRTKAIVIINP--NNPTGALY- 298 (517)
T ss_pred ---EEeec---------------CcccCCC--CC--------HHHHHHhcC-------cCceEEEEECC--CCCCCcCc-
Confidence 00000 0000000 00 144555553 22334556677 67778776
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcE--E---Eeccccc-CCccccceeecc--hH----
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDI--A---CYGKLLT-GGVIPLAATLAT--NA---- 706 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDi--v---tlgKgLg-gGy~PlsAvl~~--~~---- 706 (818)
+.+.+++|.++|++||+++|.||++..|--.|..+. ......||. + +|||..+ .| +-+|.++++ ++
T Consensus 299 ~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~-s~~~~~~~~~vi~~~S~SK~~~~~G-~RiG~~i~~~~~~~~~~ 376 (517)
T PRK13355 299 PREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT-SIASLAPDLFCVTFSGLSKSHMIAG-YRIGWMILSGNKRIAKD 376 (517)
T ss_pred CHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc-cHHHhCCCCeEEEEecchhhccCcc-cceEEEEeeCchhhHHH
Confidence 799999999999999999999999976622232111 001123553 2 4799864 45 678888743 33
Q ss_pred HHhhc---cCC----hH--------HH----------H---------HHHHHHHHcCCCeeEEEeeeeEEEE-EEecCcc
Q 003466 707 VFDSF---VGD----SK--------LW----------D---------LELIQQISSHRTVQRVVALGTLCAI-ELQAAGC 751 (818)
Q Consensus 707 i~~~l---~~~----~~--------~~----------~---------~~l~~~l~~~~~v~~vrg~Gl~~~i-el~~~~~ 751 (818)
+++.+ ... .. .+ . +.+.+.|++.+.+.-....|.++.+ .+.....
T Consensus 377 ~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~ 456 (517)
T PRK13355 377 YIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDVKKF 456 (517)
T ss_pred HHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCcccC
Confidence 22211 000 00 00 0 1122334444444434455655544 4432100
Q ss_pred cCCCchHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 752 NAGYGSLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 752 ~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.. . .....+.+.|.++||.+.|+ .+.+|++. ..++++|++.+++|.+.+...
T Consensus 457 ~~-~--~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~--~~~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 457 NI-H--DDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVY--LPRLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred CC-C--CHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEe--CCCHHHHHHHHHHHHHHHHHh
Confidence 00 0 01222345567889999873 25677776 467899999999999988654
No 205
>PRK12414 putative aminotransferase; Provisional
Probab=98.96 E-value=2.4e-07 Score=104.72 Aligned_cols=301 Identities=13% Similarity=0.097 Sum_probs=170.2
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCCC--CCcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKGW--ASRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~~--l~~v~f~~SGseA~e~ 476 (818)
.+||+..|.. .++ - .+.+.+++.+.+.+. ..+....+..+...++++.+.+..|... -+.++.+++|++|...
T Consensus 30 ~~i~l~~g~p--~~~-~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~ 105 (384)
T PRK12414 30 DALNLSQGAP--NFA-P-DPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYA 105 (384)
T ss_pred CeEEcCCCCC--CCC-C-CHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHH
Confidence 5677776543 344 2 688999988766542 1111123445677888888888766321 1469999999999998
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
+++... ..| .+|++.+-+|.+.. ..+...|..
T Consensus 106 ~~~~l~-----~~g----------------d~Vlv~~p~y~~~~-~~~~~~g~~-------------------------- 137 (384)
T PRK12414 106 AISALV-----HPG----------------DEVIYFEPSFDSYA-PIVRLQGAT-------------------------- 137 (384)
T ss_pred HHHHhc-----CCC----------------CEEEEeCCCccchH-HHHHHcCCE--------------------------
Confidence 887551 222 36888887776532 111111111
Q ss_pred CcceeecCcchhhhhccccccccc-cCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITF-CSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~-nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
.+.+|-.. ++ + -| .+.+++.+. .++.+|++... +.-.|.
T Consensus 138 ----~~~v~~~~-------~~--~~~d------------------~~~l~~~l~--------~~~~~v~i~~p-~NPTG~ 177 (384)
T PRK12414 138 ----PVAIKLSP-------ED--FRVN------------------WDEVAAAIT--------PRTRMIIVNTP-HNPSAT 177 (384)
T ss_pred ----EEEEecCc-------cc--cccC------------------HHHHHhhcC--------cccEEEEEcCC-CCCCCc
Confidence 01111000 00 0 01 144555553 24555665543 677787
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-h-hcccCCCCcE---EEeccccc-CCccccceeecchHHHh
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-T-ADLLGCVPDI---ACYGKLLT-GGVIPLAATLATNAVFD 709 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a-~e~~gv~PDi---vtlgKgLg-gGy~PlsAvl~~~~i~~ 709 (818)
+. +++.+++|.++|++||+++|+||++.-|--.|... . ....+....+ -+|||.+| .| +-+|.+++++++++
T Consensus 178 ~~-s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG-lRiG~~v~~~~l~~ 255 (384)
T PRK12414 178 VF-SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTG-WRVGYCLAPAELMD 255 (384)
T ss_pred CC-CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCcc-ceEEEEecCHHHHH
Confidence 66 68889999999999999999999996542123211 1 1111222122 27999997 67 78899999998876
Q ss_pred hccCCh--------H--------HH---------H-------HHHHHHHHcCCCeeEEEeee-eEEEEEEecCcccCCCc
Q 003466 710 SFVGDS--------K--------LW---------D-------LELIQQISSHRTVQRVVALG-TLCAIELQAAGCNAGYG 756 (818)
Q Consensus 710 ~l~~~~--------~--------~~---------~-------~~l~~~l~~~~~v~~vrg~G-l~~~iel~~~~~~~~~~ 756 (818)
.+.... . .+ . +.+.+.+++++ +.-....| +++-+.+..-. .
T Consensus 256 ~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~~~~~~~~~~~-----~ 329 (384)
T PRK12414 256 EIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-FELLPSEGSFFMLARFRHFS-----D 329 (384)
T ss_pred HHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCcceEEEEcccccC-----C
Confidence 553211 0 01 0 11223344443 22122334 34333443210 0
Q ss_pred hHHHHHHH-HHHHhCCceEeec---------CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 757 SLYAASLL-KKLREDGVYMRPL---------GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 757 ~~~a~~~~-~~l~e~Gvlv~p~---------g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
.....++ +.|.++||.+.|+ .+.+|++.. .+++++++.+++|.+
T Consensus 330 -~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 330 -ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred -CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 0123444 5566889999872 246888776 368899999988853
No 206
>PRK06836 aspartate aminotransferase; Provisional
Probab=98.95 E-value=3.9e-07 Score=103.33 Aligned_cols=173 Identities=15% Similarity=0.118 Sum_probs=108.0
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHh------cCCcEEEeecccCcccCCccch--hcccCCCCcEE--Eec
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQN------RKIPVIFDEVFTGFWRLGVETT--ADLLGCVPDIA--CYG 688 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~------~gilLI~DEV~TGfGRtG~~~a--~e~~gv~PDiv--tlg 688 (818)
++.+|++-.. +.-.|... |.+.+++|.++|++ ||+++|.||++..|-..|.... ...++ -.++ +||
T Consensus 168 ~~~~v~~~~p-~NPtG~~~-~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~i~~~S~S 243 (394)
T PRK06836 168 KTKAVIINSP-NNPTGVVY-SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYD--NSIVVYSFS 243 (394)
T ss_pred CceEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccC--cEEEEecch
Confidence 4556665553 67777776 78889999999999 9999999999977632232111 11111 1233 599
Q ss_pred cccc-CCccccceeecchHHHhh------cc---------CChH--------HH---------H---HHHHHHHHcCCCe
Q 003466 689 KLLT-GGVIPLAATLATNAVFDS------FV---------GDSK--------LW---------D---LELIQQISSHRTV 732 (818)
Q Consensus 689 KgLg-gGy~PlsAvl~~~~i~~~------l~---------~~~~--------~~---------~---~~l~~~l~~~~~v 732 (818)
|.+| .| +-+|.+++++++.+. +. .... .+ . +.+.+.|+.++.
T Consensus 244 K~~~~pG-lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~r~~l~~~L~~~g~- 321 (394)
T PRK06836 244 KSLSLPG-ERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATVDVSIYKRNRDLLYDGLTELGF- 321 (394)
T ss_pred hhccCcc-eeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHhCCC-
Confidence 9998 67 688999998765321 10 1111 11 0 112334444432
Q ss_pred eEEEee-eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 733 QRVVAL-GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 733 ~~vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
.-.... |+.+-+.+... .+..+++.|.++||.+.|+ ++.+|+... .+++++++.+++|.++++
T Consensus 322 ~~~~~~gg~~~~~~~~~~---------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~ 390 (394)
T PRK06836 322 ECVKPQGAFYLFPKSPEE---------DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAK 390 (394)
T ss_pred EeecCCceEEEEEeCCCC---------CHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 212222 44443433211 1445778889999999985 367888775 589999999999999887
Q ss_pred HH
Q 003466 807 EF 808 (818)
Q Consensus 807 ~l 808 (818)
+.
T Consensus 391 ~~ 392 (394)
T PRK06836 391 EY 392 (394)
T ss_pred Hh
Confidence 64
No 207
>PRK08175 aminotransferase; Validated
Probab=98.95 E-value=1.4e-07 Score=107.06 Aligned_cols=190 Identities=9% Similarity=0.032 Sum_probs=117.2
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch-hcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT-ADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a-~e~~gv 680 (818)
+.+++.++. ...++.+|++... ++..|... +.+-+++|.++|++||+++|.||++..+--.|.... ...+.-
T Consensus 152 ~~l~~~l~~-----~~~~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~ 224 (395)
T PRK08175 152 NELERAIRE-----SYPKPKMMILGFP-SNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG 224 (395)
T ss_pred HHHHHHHhh-----ccCCceEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC
Confidence 456666652 2235667776632 67777766 888899999999999999999999976522222111 101110
Q ss_pred CCc----EEEeccccc-CCccccceeecchHHHhhccCCh--------H--------HH----------H-------HHH
Q 003466 681 VPD----IACYGKLLT-GGVIPLAATLATNAVFDSFVGDS--------K--------LW----------D-------LEL 722 (818)
Q Consensus 681 ~PD----ivtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~--------~--------~~----------~-------~~l 722 (818)
.+| +.+|||.+| .| +-+|.+++++++++.+.... . .+ . +.+
T Consensus 225 ~~~~~i~~~S~SK~~g~pG-lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (395)
T PRK08175 225 AKDVAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVL 303 (395)
T ss_pred cccCEEEEeeccccccCcc-hhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 123 247999996 56 67888999998887653210 0 00 0 112
Q ss_pred HHHHHcCCCeeEE-EeeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHH
Q 003466 723 IQQISSHRTVQRV-VALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEV 793 (818)
Q Consensus 723 ~~~l~~~~~v~~v-rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~ed 793 (818)
.+.++..+. .-. -..|.++-+++.... ....+..++.+|+ ++||++.|+ .+.+|+... .+++.
T Consensus 304 ~~~L~~~~~-~~~~p~~g~~i~i~l~~~~-----~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~--~~~~~ 375 (395)
T PRK08175 304 VKGLHEAGW-MVEMPKASMYVWAKIPEPY-----AAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI--ENRDR 375 (395)
T ss_pred HHHHHHcCC-cccCCCEEEEEEEECCccc-----CCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC--CCHHH
Confidence 333444432 212 124666667665331 0011456777766 689999984 247888764 57889
Q ss_pred HHHHHHHHHHHHHH
Q 003466 794 CSQLLLKLYQRLEE 807 (818)
Q Consensus 794 Id~~~~~l~~~l~~ 807 (818)
+.+++++|.+.+.+
T Consensus 376 ~~~al~~l~~~l~~ 389 (395)
T PRK08175 376 IRQAIRGIKAMFRA 389 (395)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999888764
No 208
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.95 E-value=3.4e-07 Score=104.09 Aligned_cols=315 Identities=11% Similarity=0.061 Sum_probs=177.2
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc--ccccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF--GHVMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~--~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e 475 (818)
.++|+..|.. -+.. .+.+.+++.+.+... ..+....+..+....+|+.+.+..+.. ..+ .+++++++.+|..
T Consensus 34 ~~~~l~~g~p---~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~ 109 (403)
T PRK08636 34 DIIDFSMGNP---DGPT-PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYV 109 (403)
T ss_pred CEEEcCCcCC---CCCC-CHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHH
Confidence 6777766422 2323 566778777765431 111112334456777888886643321 124 6999999999988
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.++++. ...| ..|++-+-+|.+.... ....|..
T Consensus 110 ~~~~~l-----~~~g----------------d~Vlv~~P~y~~~~~~-~~~~g~~------------------------- 142 (403)
T PRK08636 110 HLVQAI-----TNPG----------------DVAIVPDPAYPIHSQA-FILAGGN------------------------- 142 (403)
T ss_pred HHHHHh-----CCCC----------------CEEEEcCCCCcchHHH-HHhcCCE-------------------------
Confidence 888865 1222 3688888888764322 1222211
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEc-cccccCCC
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIE-PVVHAAGG 634 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvE-PV~~g~gG 634 (818)
.+++|-.. ++ .+. -|.+. ..+.+++.++. +..++.++++- | +.-.|
T Consensus 143 -----~~~v~~~~------------~~---~~~--~d~~~----l~~~l~~~~~~-----~~~~~~~i~~~~P--~NPTG 189 (403)
T PRK08636 143 -----VHKMPLEY------------NE---DFE--LDEDQ----FFENLEKALRE-----SSPKPKYVVVNFP--HNPTT 189 (403)
T ss_pred -----EEEEeccc------------cc---cCc--cChhh----hhhHHHHHHhh-----ccCCceEEEEeCC--CCCCC
Confidence 01111000 00 000 00001 12445666652 23345566655 5 67778
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCcE----EEeccccc-CCccccceeecchHHH
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPDI----ACYGKLLT-GGVIPLAATLATNAVF 708 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PDi----vtlgKgLg-gGy~PlsAvl~~~~i~ 708 (818)
.+. +.+-+++|.++|++|++++|.||++..|--.+... ....+.-.+|. .+|||.+| .| +-+|.++++++++
T Consensus 190 ~~~-s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-lRiG~iv~~~~li 267 (403)
T PRK08636 190 ATV-EKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAG-WRVGFVVGNKKLV 267 (403)
T ss_pred ccC-CHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCcc-ceeeeeeCCHHHH
Confidence 777 78889999999999999999999997652122211 11111112332 35899996 67 7999999999987
Q ss_pred hhccCCh--------H--------HH----------H-------HHHHHHHHcCCCeeEEE-eeeeEEEEEEecCcccCC
Q 003466 709 DSFVGDS--------K--------LW----------D-------LELIQQISSHRTVQRVV-ALGTLCAIELQAAGCNAG 754 (818)
Q Consensus 709 ~~l~~~~--------~--------~~----------~-------~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~ 754 (818)
+.+.... . .+ . +.+.+.++.++ +.-.. ..|+++-+.+....
T Consensus 268 ~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~p~~g~~~~~~l~~~~---- 342 (403)
T PRK08636 268 GALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAG-WELQKPRASMFVWAKIPEPA---- 342 (403)
T ss_pred HHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCCcceEEEEECCCcc----
Confidence 7543210 0 00 0 11223344433 22222 24555555553210
Q ss_pred CchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 755 YGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 755 ~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.......++..++ ++||.+.|+ .+.+|+... .+++++++.+++|.++++..
T Consensus 343 -~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 343 -RHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred -CCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 0011456776655 689999873 256888774 57899999999999888653
No 209
>PRK08363 alanine aminotransferase; Validated
Probab=98.95 E-value=3.3e-07 Score=103.95 Aligned_cols=309 Identities=11% Similarity=0.019 Sum_probs=163.6
Q ss_pred ceeeccccccc-ccCCCCCCHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWT-QGPDATLQIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~-~~lGh~~hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ 476 (818)
.+||+..|.-. ..++ - ++.+.+++.+.+.... .+....+..+....+++.+....+.+ .-+.+++++++++|+..
T Consensus 31 ~~i~l~~g~p~~~~~~-p-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 108 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQ-P-PEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQL 108 (398)
T ss_pred CeEEEeCCCCCcCCCC-C-CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 56666655422 1233 2 6889999988775421 11112233444555555554432311 12579999999999998
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
++... -..| ..|++.+-+|.+....+.. .|..
T Consensus 109 ~~~~~-----~~~g----------------d~Vl~~~p~y~~~~~~~~~-~g~~-------------------------- 140 (398)
T PRK08363 109 IFGAL-----LDPG----------------DEILIPGPSYPPYTGLVKF-YGGV-------------------------- 140 (398)
T ss_pred HHHHh-----CCCC----------------CEEEEcCCCCcchHHHHHH-cCCE--------------------------
Confidence 88765 1222 2577777666654322111 1110
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEE-EccccccCCCc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALI-IEPVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVI-vEPV~~g~gG~ 635 (818)
.+.+|... .+ .+. + + .+.+++.+. .++.+|+ +.| ++-.|.
T Consensus 141 ----~v~~~~~~-------~~-~~~-~--------d--------~~~l~~~~~--------~~~~~v~l~~p--~NPtG~ 181 (398)
T PRK08363 141 ----PVEYRTIE-------EE-GWQ-P--------D--------IDDIRKKIT--------EKTKAIAVINP--NNPTGA 181 (398)
T ss_pred ----EEEecccc-------cc-CCc-C--------C--------HHHHHhhCC--------cceEEEEEECC--CCCCCc
Confidence 00110000 00 000 0 0 134554443 1334444 445 666777
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcE---EEecccc-cCCccccceeec--chHHHh
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDI---ACYGKLL-TGGVIPLAATLA--TNAVFD 709 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDi---vtlgKgL-ggGy~PlsAvl~--~~~i~~ 709 (818)
.. +.+-+++|.++|++||+++|.||++..|--.+..-....+.-...+ -+|||.. ..| +-+|.+++ ++++++
T Consensus 182 ~~-~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~~~~~~~~~~~~ 259 (398)
T PRK08363 182 LY-EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATG-WRLGYIYFVDPEGKLA 259 (398)
T ss_pred Cc-CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCcc-ceEEEEEEeCcHHHHH
Confidence 66 7888999999999999999999998765222322111111111223 3799995 456 68888886 544332
Q ss_pred hcc-----------CChH--------HHH-----------------HHHHHHHHcCCCeeEEEeeeeEEEE-EEecCccc
Q 003466 710 SFV-----------GDSK--------LWD-----------------LELIQQISSHRTVQRVVALGTLCAI-ELQAAGCN 752 (818)
Q Consensus 710 ~l~-----------~~~~--------~~~-----------------~~l~~~l~~~~~v~~vrg~Gl~~~i-el~~~~~~ 752 (818)
.+. ..+. .+. +.+.+.++.++.+.-....|.++.+ .+....
T Consensus 260 ~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~-- 337 (398)
T PRK08363 260 EVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGP-- 337 (398)
T ss_pred HHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCC--
Confidence 211 0110 010 1133445555443322344554444 443210
Q ss_pred CCCchHHHHHH-HHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 753 AGYGSLYAASL-LKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 753 ~~~~~~~a~~~-~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
. .....+ .+.|.++||.+.|+ .+.+|++.. .+++++++.+++|.+.+.+
T Consensus 338 -~---~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 338 -W---KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred -C---CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 0 012234 45567899999873 246787763 5689999999999988765
No 210
>PRK06348 aspartate aminotransferase; Provisional
Probab=98.95 E-value=2e-07 Score=105.22 Aligned_cols=172 Identities=17% Similarity=0.182 Sum_probs=104.0
Q ss_pred EEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchh-cccCCCCc---EEEeccccc-CC
Q 003466 620 IGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTA-DLLGCVPD---IACYGKLLT-GG 694 (818)
Q Consensus 620 iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~-e~~gv~PD---ivtlgKgLg-gG 694 (818)
+.+|++..- ++-.|.+. +.+.+++|.++|++||+++|.||++..|--.+..-.. ...+..+. +.+|||.++ .|
T Consensus 163 ~~~v~l~~p-~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G 240 (384)
T PRK06348 163 TKAIILNSP-NNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTG 240 (384)
T ss_pred ccEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCcc
Confidence 344444432 67778766 7899999999999999999999999876322221111 11122222 237999998 67
Q ss_pred ccccceeecchHHHhhccCCh--------H--------HH----------H-------HHHHHHHHcCCCeeEEEee-ee
Q 003466 695 VIPLAATLATNAVFDSFVGDS--------K--------LW----------D-------LELIQQISSHRTVQRVVAL-GT 740 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~--------~--------~~----------~-------~~l~~~l~~~~~v~~vrg~-Gl 740 (818)
+-+|.+++++++++.+.... . .+ . +.+.+.++..+.+.-.... |+
T Consensus 241 -lRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~ 319 (384)
T PRK06348 241 -WRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSI 319 (384)
T ss_pred -ccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeE
Confidence 79999999998876543210 0 00 0 0122333333332212232 44
Q ss_pred EEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 741 LCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 741 ~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
++-+.+.... .....+++.|+ +.||.+.|+ .+.+|++.. .+++++++.+++|.+
T Consensus 320 ~~~~~~~~~~-------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 381 (384)
T PRK06348 320 YAFINIKKTG-------LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEK 381 (384)
T ss_pred EEEEecccCC-------CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHh
Confidence 4444543211 12456788876 569999872 257888864 578899999888754
No 211
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.95 E-value=1.6e-07 Score=105.16 Aligned_cols=169 Identities=12% Similarity=0.026 Sum_probs=105.4
Q ss_pred CcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch-hcc--cCCCCc----EEEeccc
Q 003466 618 GCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT-ADL--LGCVPD----IACYGKL 690 (818)
Q Consensus 618 ~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a-~e~--~gv~PD----ivtlgKg 690 (818)
.++.+|++... ++..|.+. +.+-+++|.++|++||+++|.||++..|.-.|.... ... .+...+ +-+|||.
T Consensus 147 ~~~~~v~~~~p-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 224 (364)
T PRK07865 147 QRPALIWLNSP-SNPTGRVL-GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQ 224 (364)
T ss_pred ccceEEEEcCC-CCCCCccC-CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhc
Confidence 35567777764 78888777 688899999999999999999999986643333211 111 011112 2379999
Q ss_pred cc-CCccccceeecchHHHhhccCCh--------H--------------HH----------HHHHHHHHHcCCCeeEEEe
Q 003466 691 LT-GGVIPLAATLATNAVFDSFVGDS--------K--------------LW----------DLELIQQISSHRTVQRVVA 737 (818)
Q Consensus 691 Lg-gGy~PlsAvl~~~~i~~~l~~~~--------~--------------~~----------~~~l~~~l~~~~~v~~vrg 737 (818)
++ .| +-+|.+++++++++.+.... . .+ .+.+.+.++.++. .-...
T Consensus 225 ~~~~G-lRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~ 302 (364)
T PRK07865 225 SNLAG-YRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAGF-RVDHS 302 (364)
T ss_pred cCCCc-eeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcCC-cccCC
Confidence 85 45 67888999998877653210 0 00 0112334444432 11123
Q ss_pred e-eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 738 L-GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 738 ~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
. |+++-+.+..+ +..+++.|.++||++.|+ .+.+|+.... +++++++++++|.
T Consensus 303 ~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 303 EAGLYLWATRGED----------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred CccEEEEEeCCCC----------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 3 33333333211 345778899999999872 2568887654 5899999998874
No 212
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=98.94 E-value=1.5e-07 Score=106.29 Aligned_cols=170 Identities=11% Similarity=0.039 Sum_probs=103.9
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc----chhcc-cCCCCcEEEeccccc-
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE----TTADL-LGCVPDIACYGKLLT- 692 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~----~a~e~-~gv~PDivtlgKgLg- 692 (818)
++.+|++..- ++-.|.+. +.+-+++|.++|++||+++|+||++..|--.|.. ..... .+..-.+.+|||.+|
T Consensus 166 ~~~~v~l~~p-~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 243 (385)
T PRK09276 166 KAKLMFINYP-NNPTGAVA-DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNM 243 (385)
T ss_pred cceEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCC
Confidence 4456666632 67778766 8889999999999999999999999766322221 11111 122223458999996
Q ss_pred CCccccceeecchHHHhhccCCh---------H-------HH-----------------HHHHHHHHHcCCCeeEEEee-
Q 003466 693 GGVIPLAATLATNAVFDSFVGDS---------K-------LW-----------------DLELIQQISSHRTVQRVVAL- 738 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~l~~~~---------~-------~~-----------------~~~l~~~l~~~~~v~~vrg~- 738 (818)
.| +-+|.+++++++++.+.... . .+ .+.+.+.++.++ +.-....
T Consensus 244 ~G-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~ 321 (385)
T PRK09276 244 TG-WRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-LEVEPPKA 321 (385)
T ss_pred cc-hhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCc
Confidence 56 67888999998877653210 0 00 011233344443 2212222
Q ss_pred eeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 739 GTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 739 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
|.++-+.+... ..+..+++.|+ ++||++.|+ .+.+|+... .+++++.+++++|.
T Consensus 322 ~~~~~v~~~~~--------~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~ 383 (385)
T PRK09276 322 TFYVWAPVPKG--------YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERIK 383 (385)
T ss_pred ceEEEEECCCC--------CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHh
Confidence 44445555322 12456788877 579999984 257888765 46778888877764
No 213
>PRK06107 aspartate aminotransferase; Provisional
Probab=98.94 E-value=2.9e-07 Score=104.66 Aligned_cols=314 Identities=12% Similarity=0.026 Sum_probs=172.3
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc-cccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG-HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIA 477 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~-~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~A 477 (818)
..+|+..|.. .++ - +|.+.+++.+.+++.. .+....+..+....+++.+.+..+.. ..+.+++++++++|+..+
T Consensus 34 ~~i~l~~g~p--~~~-~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (402)
T PRK06107 34 SIVDLTVGEP--DFD-T-PDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLA 109 (402)
T ss_pred CEEEcCCCCC--CCC-C-CHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH
Confidence 5566655432 222 2 6889999998876421 12222344566778888887765431 125799998899999999
Q ss_pred HHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccC
Q 003466 478 LKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYN 557 (818)
Q Consensus 478 LklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 557 (818)
++.. -..| ..|+..+.+|.+.. ..+...+...
T Consensus 110 ~~~~-----~~~g----------------d~vl~~~p~y~~y~-~~~~~~~~~~-------------------------- 141 (402)
T PRK06107 110 LMAT-----LEAG----------------DEVIIPAPYWVSYP-DMVLANDGTP-------------------------- 141 (402)
T ss_pred HHHh-----cCCC----------------CEEEEecCCCcCHH-HHHHHcCCEE--------------------------
Confidence 8743 1112 25666666665532 2121111100
Q ss_pred cceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEc-cccccCCCcc
Q 003466 558 SKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIE-PVVHAAGGMH 636 (818)
Q Consensus 558 ~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvE-PV~~g~gG~~ 636 (818)
..++.+... .|+ + + .+.+++.+. .++.+|++. | ++-.|..
T Consensus 142 --~~v~~~~~~----------~~~-~--------~--------~~~l~~~~~--------~~~~~v~l~~p--~NPtG~~ 182 (402)
T PRK06107 142 --VIVACPEEQ----------GFK-L--------T--------PEALEAAIT--------PRTRWLILNAP--SNPTGAV 182 (402)
T ss_pred --EEecCCccc----------CCC-C--------C--------HHHHHhhcC--------cCceEEEEECC--CCCCCcC
Confidence 001110000 000 0 0 144555443 234444444 5 5667765
Q ss_pred cCCHHHHHHHHHHHHhc-CCcEEEeecccCcccCCccch-hccc--CCCCcEE---Eeccccc-CCccccceeecchHHH
Q 003466 637 MVDPLFQRILVKECQNR-KIPVIFDEVFTGFWRLGVETT-ADLL--GCVPDIA---CYGKLLT-GGVIPLAATLATNAVF 708 (818)
Q Consensus 637 ~~p~~fl~~LreLc~~~-gilLI~DEV~TGfGRtG~~~a-~e~~--gv~PDiv---tlgKgLg-gGy~PlsAvl~~~~i~ 708 (818)
. +.+-++++.++|++| |+++|.||++..+.-.+..+. .... +....++ .|||.++ .| +-+|.+++++++.
T Consensus 183 ~-s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG-lRiG~~~~~~~~~ 260 (402)
T PRK06107 183 Y-SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTG-WRIGYAAGPADLI 260 (402)
T ss_pred c-CHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcc-cceeeeecCHHHH
Confidence 5 888999999999998 999999999976532332111 1111 1222344 4699997 77 6889999999888
Q ss_pred hhccCChH----------------HH--------------H---HHHHHHHHcCCCeeEEEeeee-EEEEEEecCcccCC
Q 003466 709 DSFVGDSK----------------LW--------------D---LELIQQISSHRTVQRVVALGT-LCAIELQAAGCNAG 754 (818)
Q Consensus 709 ~~l~~~~~----------------~~--------------~---~~l~~~l~~~~~v~~vrg~Gl-~~~iel~~~~~~~~ 754 (818)
+.+..... .+ . +.+.+.++.++.+.-....|. ++-+.+..-.....
T Consensus 261 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~ 340 (402)
T PRK06107 261 AAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTT 340 (402)
T ss_pred HHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeeccccccccc
Confidence 75532110 11 0 112334444433332233343 33333321000000
Q ss_pred Cch---HHHHHHHHHH-HhCCceEeec---C--CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 755 YGS---LYAASLLKKL-REDGVYMRPL---G--NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 755 ~~~---~~a~~~~~~l-~e~Gvlv~p~---g--~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+.. .....++..| .++||.+.|+ | +.+|++.. .+++++++.+++|.+.++++
T Consensus 341 ~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 341 PEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA--TSLETLEEACARIERAVAAL 401 (402)
T ss_pred ccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhc
Confidence 000 1133455555 5789999984 2 56777776 46899999999999888654
No 214
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=98.93 E-value=1.2e-07 Score=110.39 Aligned_cols=303 Identities=12% Similarity=0.040 Sum_probs=162.6
Q ss_pred CHHHHHHHHHhhhhcccccC-----CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccccc
Q 003466 418 QIELARDMGYTAARFGHVMF-----PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVL 492 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~~-----~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~ 492 (818)
.|.|.+++.+......+..+ ..+..+...++.+++++++|-+ +..++.++|+.+...++.++ |.+...+|+
T Consensus 83 ~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~-r~~~~~~Gd- 158 (481)
T PRK04366 83 NPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMI-RAYHEARGD- 158 (481)
T ss_pred CHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHH-HHHhhccCc-
Confidence 68888888875322222111 2233466788889999988742 33556678888887777666 443333221
Q ss_pred ccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhc
Q 003466 493 VDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKI 572 (818)
Q Consensus 493 ~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~ 572 (818)
.+|.+||+.+. .|.+...++...|.... .++....+
T Consensus 159 -----------~~~~~Vlv~~~-~hp~~~~~~~~~G~~vv----------------------------~v~~~~~~---- 194 (481)
T PRK04366 159 -----------TKRTEVIVPDS-AHGTNPASAAMAGFKVV----------------------------EIPSNEDG---- 194 (481)
T ss_pred -----------CCCCEEEEcCC-ccHhHHHHHHHcCCEEE----------------------------EeecCCCC----
Confidence 13456666665 66665554433332110 11110000
Q ss_pred cccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHh
Q 003466 573 VEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQN 652 (818)
Q Consensus 573 ~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~ 652 (818)
..| .+.+++.+. +++++|++--- . ..|.+ ..-+++|.++|++
T Consensus 195 -------~~D------------------~e~L~~~i~--------~~t~~V~v~~P-n-~tG~~---~~dl~eI~~~a~~ 236 (481)
T PRK04366 195 -------LVD------------------LEALKAAVG--------EDTAALMLTNP-N-TLGLF---ERNILEIAEIVHE 236 (481)
T ss_pred -------CcC------------------HHHHHhhcc--------cCCeEEEEeCC-C-Ccccc---chHHHHHHHHHHH
Confidence 011 245555553 24455555321 3 44543 1238999999999
Q ss_pred cCCcEEEeecccCcccCCccchhcccCCCCcEEEe--cccccC----Cccc-cceeecchHHHhhcc-------------
Q 003466 653 RKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACY--GKLLTG----GVIP-LAATLATNAVFDSFV------------- 712 (818)
Q Consensus 653 ~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl--gKgLgg----Gy~P-lsAvl~~~~i~~~l~------------- 712 (818)
+|+++|+|.++. .+-+|.. ....+| .|+++. -|.|++ | -| +|.+.+++++.+.+.
T Consensus 237 ~gal~iVD~a~~-~~~~g~~-~~~~~G--aD~~~~~~hK~l~~P~g~G-gp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l 311 (481)
T PRK04366 237 AGGLLYYDGANL-NAILGKA-RPGDMG--FDVVHLNLHKTFSTPHGGG-GPGSGPVGVKEELAPFLPVPVVEKDGDRYRL 311 (481)
T ss_pred cCCEEEEEecCh-hhhcccC-CccccC--CCEEEEechhhcCCCCCCC-CCCeeeeeehhhhHhhCCCCeeeccCCceee
Confidence 999999999984 2333322 122334 488754 387762 2 13 334455665554431
Q ss_pred ----CCh--H----------------H---HH---------------HHHHHHHHcCCCeeEEEeeeeE-EEEEEecCcc
Q 003466 713 ----GDS--K----------------L---WD---------------LELIQQISSHRTVQRVVALGTL-CAIELQAAGC 751 (818)
Q Consensus 713 ----~~~--~----------------~---~~---------------~~l~~~l~~~~~v~~vrg~Gl~-~~iel~~~~~ 751 (818)
... + + +. +.+.+.|++...+. . .+.. ..+-+...
T Consensus 312 ~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~-~--~~~~~~~~~~~~~-- 386 (481)
T PRK04366 312 DYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLP-Y--DRPCMHEFVLSGK-- 386 (481)
T ss_pred cccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCccc-C--CCCeeEEEEEECc--
Confidence 000 0 0 00 11222333321111 0 1111 11111100
Q ss_pred cCCCchHHHHHHHHHHHhCCceEee------cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhHHHhh
Q 003466 752 NAGYGSLYAASLLKKLREDGVYMRP------LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVEEKLK 816 (818)
Q Consensus 752 ~~~~~~~~a~~~~~~l~e~Gvlv~p------~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~~~~~ 816 (818)
........+..+.++|.++|+++.. ..+.+|+++...+|++|||+++++|.++.+++..--+.+|
T Consensus 387 ~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~~~~~~~ 457 (481)
T PRK04366 387 KLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKENPELVK 457 (481)
T ss_pred cccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHhCcHhHh
Confidence 0000001356789999999998752 2468999999999999999999999999988875544444
No 215
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=98.93 E-value=1.6e-07 Score=104.75 Aligned_cols=275 Identities=12% Similarity=0.122 Sum_probs=159.2
Q ss_pred CHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccC
Q 003466 418 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLG 497 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~ 497 (818)
.+.+.+|+.+.+...... .+..+...+|.+.++++.+-. -+.++++++.++|+..+++.. -+.|
T Consensus 37 p~~~~~a~~~~~~~~~~~---~y~~~~~~~lr~~ia~~~~~~-~~~i~it~G~~~~l~~~~~~l-----~~~g------- 100 (351)
T PRK14807 37 PEEVIKNIQEIVKSSQVN---IYPDPTAEKLREELARYCSVV-PTNIFVGNGSDEIIHLIMLAF-----INKG------- 100 (351)
T ss_pred CHHHHHHHHHHhhcCccc---CCCCccHHHHHHHHHHHhCCC-cccEEEecCHHHHHHHHHHHh-----cCCC-------
Confidence 689999998877532111 122233466778888876532 357888888888888777754 1222
Q ss_pred CCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcccccc
Q 003466 498 KDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKD 577 (818)
Q Consensus 498 ~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~ 577 (818)
..|++.+.+|.+... .....|... +.+|..- +
T Consensus 101 ---------d~Vlv~~p~y~~~~~-~~~~~g~~~------------------------------~~v~~~~--------~ 132 (351)
T PRK14807 101 ---------DVVIYPHPSFAMYSV-YSKIAGAVE------------------------------IPVKLKE--------D 132 (351)
T ss_pred ---------CEEEEeCCChHHHHH-HHHHcCCeE------------------------------EEeecCC--------C
Confidence 368888887765321 112222110 1111000 0
Q ss_pred ccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcE
Q 003466 578 ITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPV 657 (818)
Q Consensus 578 ~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilL 657 (818)
+. -+ .+.+++.+. ..++.+|++... ++-.|...+ .+++.++|++++.++
T Consensus 133 --~~---------~d--------~~~l~~~~~-------~~~~k~v~l~~p-~NPtG~~~~----~~~l~~l~~~~~~~~ 181 (351)
T PRK14807 133 --YT---------YD--------VGSFIKVIE-------KYQPKLVFLCNP-NNPTGSVIE----REDIIKIIEKSRGIV 181 (351)
T ss_pred --CC---------CC--------HHHHHHHhh-------ccCCCEEEEeCC-CCCCCCCCC----HHHHHHHHHhCCCEE
Confidence 00 00 144555554 224556665553 777888776 677888888888999
Q ss_pred EEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCccccceeecchHHHhhccCCh--H------------HH-
Q 003466 658 IFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVIPLAATLATNAVFDSFVGDS--K------------LW- 718 (818)
Q Consensus 658 I~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~--~------------~~- 718 (818)
|+||++..|. |.... ...+-.+.++ +|||.+| .| +.+|.+++++++++.+.... . .+
T Consensus 182 ivDe~y~~~~--~~~~~-~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 257 (351)
T PRK14807 182 VVDEAYFEFY--GNTIV-DVINEFENLIVLRTLSKAFGLAG-LRVGYAVANENILKYLNLVKSPYNINSLSQVIALKVLR 257 (351)
T ss_pred EEeCcchhhc--ccchH-HHhhhCCCEEEEecchHhcccch-hceeeeecCHHHHHHHHHccCCCCcCHHHHHHHHHHHh
Confidence 9999997762 32111 1111112333 7999998 78 79999999999888664311 0 11
Q ss_pred ----H----------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC------
Q 003466 719 ----D----------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG------ 778 (818)
Q Consensus 719 ----~----------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g------ 778 (818)
. +.+.+.+++.+.+.-....|.++-+.+. + ...+++.|.++||.+++..
T Consensus 258 ~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~i~~~-~----------~~~~~~~l~~~gV~v~~~~~~~~~~ 326 (351)
T PRK14807 258 TGVLKERVNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK-D----------ADYVYQGLLERGILVRDFSKVEGLE 326 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccEEEEEcC-C----------HHHHHHHHHHCCEEEEECCCCCCCC
Confidence 0 1123334444433222233444434442 1 3467888999999998731
Q ss_pred CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 779 NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 779 ~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+.+|+... ++++.+++++.|++.+
T Consensus 327 ~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 327 GALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred CeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 56788764 4678888888887643
No 216
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.93 E-value=1.2e-07 Score=106.71 Aligned_cols=172 Identities=15% Similarity=0.178 Sum_probs=109.7
Q ss_pred CcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCc---EEEeccccc-C
Q 003466 618 GCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPD---IACYGKLLT-G 693 (818)
Q Consensus 618 ~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD---ivtlgKgLg-g 693 (818)
.++.+|++-+- ++-.|... +.+-++.+.++| +++++|.||++..|...... ....-.+. +-+|||.+| .
T Consensus 167 ~~~k~i~l~~P-~NPTG~~~-s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~---~~~~~~~~~ivi~SfSK~~g~~ 239 (374)
T PRK02610 167 PPVRVVFVVHP-NSPTGNPL-TAAELEWLRSLP--EDILVVIDEAYFEFSQTTLV---GELAQHPNWVILRTFSKAFRLA 239 (374)
T ss_pred CCceEEEEeCC-CCCCCCCC-CHHHHHHHHhcc--CCcEEEEeccccccCccchH---HHHhcCCCEEEEEecchhccCc
Confidence 45666665553 88888887 666788888887 49999999999777311111 11111233 337999995 6
Q ss_pred CccccceeecchHHHhhccCCh------H--------------HH----------HHHHHHHHHcCCCeeEEEeeeeEEE
Q 003466 694 GVIPLAATLATNAVFDSFVGDS------K--------------LW----------DLELIQQISSHRTVQRVVALGTLCA 743 (818)
Q Consensus 694 Gy~PlsAvl~~~~i~~~l~~~~------~--------------~~----------~~~l~~~l~~~~~v~~vrg~Gl~~~ 743 (818)
| +.+|.+++++++++.+.... . .+ .+.+.+.++.++.+......|.++-
T Consensus 240 G-lRiG~~v~~~~l~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~ 318 (374)
T PRK02610 240 A-HRVGYAIGHPELIAVLEKVRLPYNLPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVWPSAANFLY 318 (374)
T ss_pred c-cceeeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCCcceEEE
Confidence 7 79999999998887653211 0 00 0112334444444322223344444
Q ss_pred EEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 744 IELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 744 iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+.+... ..+..+++.|.++||++++..+.+|++.. +++++++++++|.+++..+
T Consensus 319 ~~l~~~--------~~~~~~~~~l~~~gi~v~~~~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 319 LRLSQD--------AALAALHQALKAQGTLVRHTGGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred EeCCCC--------CCHHHHHHHHHHCCEEEEeCCCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 444321 12456888899999999987778888854 3577899999998887654
No 217
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=98.93 E-value=9.1e-08 Score=107.56 Aligned_cols=292 Identities=8% Similarity=0.047 Sum_probs=169.6
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
..||+..+ .+.+|. +|++++++.+.+.....+. ..-..+|-+.|++.++-. .+.++++++++|++..+++
T Consensus 30 ~~i~l~~n--en~~~~--~~~v~~a~~~~~~~~~~Yp-----~~g~~~Lr~aia~~~~~~-~~~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 30 SFVKLASN--ENPFGC--SPRVLDELQKSWLDHALYP-----DGGATTLRQTIANKLHVK-MEQVLCGSGLDEVIQIISR 99 (366)
T ss_pred ceEEeCCC--CCCCCC--CHHHHHHHHHHHHhcCcCC-----CCCHHHHHHHHHHHhCCC-cceEEECCCHHHHHHHHHH
Confidence 67787653 334554 6899999988765543221 112345666666655432 3689999999999888888
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
... +.| ..|++.+-+|.+....+ ...|..
T Consensus 100 ~l~-----~~g----------------d~vlv~~P~y~~~~~~~-~~~g~~----------------------------- 128 (366)
T PRK01533 100 AVL-----KAG----------------DNIVTAGATFPQYRHHA-IIEGCE----------------------------- 128 (366)
T ss_pred Hhc-----CCC----------------CEEEEcCCcHHHHHHHH-HHcCCE-----------------------------
Confidence 651 222 25777777776533221 111111
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
.+.+|... + ..| .+.+++.+.. ..-..+|..| ++-.|.+. +
T Consensus 129 -v~~v~~~~--------~--~~d------------------~~~l~~~~~~-------~~~~v~i~~P--~NPTG~~~-~ 169 (366)
T PRK01533 129 -VKEVALNN--------G--VYD------------------LDEISSVVDN-------DTKIVWICNP--NNPTGTYV-N 169 (366)
T ss_pred -EEEeecCC--------C--CcC------------------HHHHHHHhCc-------CCcEEEEeCC--CCCCCCCc-C
Confidence 01111000 0 001 1455555531 1223444555 78888877 7
Q ss_pred HHHHHHHHHHHHhcCCcEEEeecccCcccCCcc-chhcccCCCCcEE---Eeccccc-CCccccceeecchHHHhhccCC
Q 003466 640 PLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-TTADLLGCVPDIA---CYGKLLT-GGVIPLAATLATNAVFDSFVGD 714 (818)
Q Consensus 640 ~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-~a~e~~gv~PDiv---tlgKgLg-gGy~PlsAvl~~~~i~~~l~~~ 714 (818)
.+-+++|.++|++++ ++|+||++..|-..+.. .......-.+.++ +|||.+| .| +-+|.+++++++++.+...
T Consensus 170 ~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G-lRiG~~i~~~~~~~~l~~~ 247 (366)
T PRK01533 170 DRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLAS-FRVGYAVGHEELIEKLNVV 247 (366)
T ss_pred HHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChH-HHHhHHhCCHHHHHHHHHh
Confidence 788889999998877 57789999766322211 0111111122333 7999998 67 6888899999888765321
Q ss_pred hH-------------------HHH-----------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHH
Q 003466 715 SK-------------------LWD-----------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLL 764 (818)
Q Consensus 715 ~~-------------------~~~-----------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~ 764 (818)
.. .+. +.+.+.++.++ +.-....|.++-+.+. + +..+.
T Consensus 248 ~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~~~~~-~----------~~~~~ 315 (366)
T PRK01533 248 RLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIFLPVE-N----------GGEIY 315 (366)
T ss_pred cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEEEeCC-C----------HHHHH
Confidence 10 010 11112233332 1112334555545442 2 34688
Q ss_pred HHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 765 KKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 765 ~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+.|.++||++++..+.+|++. -+.+|.++++++|++.++..
T Consensus 316 ~~l~~~GI~Vr~~~~~iRis~---~~~~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 316 EACAHAGFIIRPFPNGVRITV---GTREQNEGVISVLQQHFENK 356 (366)
T ss_pred HHHHHCCcEEccCCCceEEeC---CCHHHHHHHHHHHHHHHHhc
Confidence 899999999998777788875 56899999999998876443
No 218
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.93 E-value=1.9e-07 Score=104.43 Aligned_cols=285 Identities=12% Similarity=0.010 Sum_probs=164.8
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCC--CCCcEEEeCChhHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG--WASRAYFSDNGSTAIEIA 477 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~--~l~~v~f~~SGseA~e~A 477 (818)
.+||+.+|. ..... .|.+.+++.+......+.. ..+..+...++++.+.+..+.. ..+.++.++++++|...+
T Consensus 22 ~~i~l~~~~---p~~~~-~~~~~~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~ 96 (357)
T TIGR03539 22 GIVDLSVGT---PVDPV-PPLIRAALAAAADAPGYPQ-TWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWL 96 (357)
T ss_pred CeEEccCCC---CCCCC-CHHHHHHHHHHHhhCCCCc-ccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHH
Confidence 678887753 22334 6788888887655433321 2344566778888887653311 136889998999988777
Q ss_pred HHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccC
Q 003466 478 LKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYN 557 (818)
Q Consensus 478 LklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 557 (818)
+.+. ....| ..|++-+-+|.+....+ ...|..
T Consensus 97 ~~~l----~~~~g----------------d~Vl~~~p~y~~~~~~~-~~~g~~--------------------------- 128 (357)
T TIGR03539 97 PTLL----GLGPG----------------DTVVIPELAYPTYEVGA-LLAGAT--------------------------- 128 (357)
T ss_pred HHHH----cCCCC----------------CEEEECCCCcHHHHHHH-HhcCCE---------------------------
Confidence 6643 01222 25777777776532111 111110
Q ss_pred cceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCccc
Q 003466 558 SKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHM 637 (818)
Q Consensus 558 ~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~ 637 (818)
.+. ++|. + .+. ..++.+|++... ++..|...
T Consensus 129 ---~~~----------------v~~~------------------~----~l~-------~~~~~~v~~~~p-~NPtG~~~ 159 (357)
T TIGR03539 129 ---PVA----------------ADDP------------------T----ELD-------PVGPDLIWLNSP-GNPTGRVL 159 (357)
T ss_pred ---Eec----------------cCCh------------------h----hcC-------ccCccEEEEeCC-CCCcCccC
Confidence 000 0010 1 121 235567777664 78888777
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchh-cc--cCC--CCcEE--Eeccccc-CCccccceeecchHHHh
Q 003466 638 VDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTA-DL--LGC--VPDIA--CYGKLLT-GGVIPLAATLATNAVFD 709 (818)
Q Consensus 638 ~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~-e~--~gv--~PDiv--tlgKgLg-gGy~PlsAvl~~~~i~~ 709 (818)
+.+.+++|.++|++||+++|.||++..|...+..... .. .+. ..-++ +|||.++ .| +-+|.+++++++++
T Consensus 160 -~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-~R~G~~i~~~~~~~ 237 (357)
T TIGR03539 160 -SVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAG-YRAGFVAGDPALVA 237 (357)
T ss_pred -CHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCc-eeEEEEecCHHHHH
Confidence 7888999999999999999999999766544432111 10 010 11233 7999975 45 67888999988877
Q ss_pred hccCCh--------H--------------HH----------HHHHHHHHHcCCCeeEEEee-eeEEEEEEecCcccCCCc
Q 003466 710 SFVGDS--------K--------------LW----------DLELIQQISSHRTVQRVVAL-GTLCAIELQAAGCNAGYG 756 (818)
Q Consensus 710 ~l~~~~--------~--------------~~----------~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~~ 756 (818)
.+.... . .+ .+.+.+.+.+++. .-.... |.++-+.+..
T Consensus 238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g~-~~~~p~~~~~~~~~~~~-------- 308 (357)
T TIGR03539 238 ELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAGF-RIDHSEAGLYLWATRGE-------- 308 (357)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCcCCCccEEEEEECCC--------
Confidence 553110 0 00 0112233444331 111222 3333333321
Q ss_pred hHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHH
Q 003466 757 SLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 757 ~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l 801 (818)
.+..+.+.|.++||.+.|+ .+.+|++... +++++++++++|
T Consensus 309 --~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 309 --DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred --CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC--CHHHHHHHHHhh
Confidence 1446788899999999873 2678888764 578999988765
No 219
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.92 E-value=1e-07 Score=109.54 Aligned_cols=182 Identities=11% Similarity=-0.032 Sum_probs=111.5
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC-
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC- 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv- 680 (818)
+.+++.+.. .+ ..|++=.. ..-++ ..+ +++++++|++||++|++|++| ++|-.|-....+.++.
T Consensus 210 d~l~~~~~~-------~~-plvii~g~-S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH-~~Gligg~~~~~~~~~~ 274 (493)
T PRK13580 210 DEIAALARE-------FK-PLILVAGY-SAYPR-RVN----FAKLREIADEVGAVLMVDMAH-FAGLVAGKVFTGDEDPV 274 (493)
T ss_pred HHHHHHHhh-------cC-CEEEEeCc-cccCC-CcC----HHHHHHHHHHcCCEEEEECch-hhceeccccchhhcCCC
Confidence 556666652 22 23333343 34444 444 999999999999999999999 5666662221122211
Q ss_pred -CCcEE--EecccccCCccccceeecchHHHhhccCChH--------------------H-------HHHH-------HH
Q 003466 681 -VPDIA--CYGKLLTGGVIPLAATLATNAVFDSFVGDSK--------------------L-------WDLE-------LI 723 (818)
Q Consensus 681 -~PDiv--tlgKgLggGy~PlsAvl~~~~i~~~l~~~~~--------------------~-------~~~~-------l~ 723 (818)
..|++ |++|+|.|- ..|.+++++++.+.+..... . +.++ +.
T Consensus 275 ~~~D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La 352 (493)
T PRK13580 275 PHADIVTTTTHKTLRGP--RGGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALA 352 (493)
T ss_pred CCCcEEEeCChhhccCC--CeEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 46765 789999552 13457788888876621110 0 1111 22
Q ss_pred HHHHcCCC-eeEEEeeeeEEEEEEecCcccCCCchHH-HHHHHHHHHhCCceEee-------c----CCEEEEECCC---
Q 003466 724 QQISSHRT-VQRVVALGTLCAIELQAAGCNAGYGSLY-AASLLKKLREDGVYMRP-------L----GNVIYLMCGP--- 787 (818)
Q Consensus 724 ~~l~~~~~-v~~vrg~Gl~~~iel~~~~~~~~~~~~~-a~~~~~~l~e~Gvlv~p-------~----g~~ir~~ppl--- 787 (818)
+.+.+.+. +..-.....++.+.+.+. .. ...+.+.|.++||++.+ . ..+||+.++.
T Consensus 353 ~~L~~~G~~vv~ggTdshIV~V~lg~~--------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~tt 424 (493)
T PRK13580 353 EGFLKRGARLVTGGTDNHLVLIDVTSF--------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTT 424 (493)
T ss_pred HHHHhcCCCccCCCCCCCEEEEEeCCH--------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhh
Confidence 33433332 100001235666666543 22 33667799999999973 2 4689999999
Q ss_pred -CChHHHHHHHHHHHHHHHHHH
Q 003466 788 -CSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 788 -~~t~edId~~~~~l~~~l~~l 808 (818)
.++++||+++++.|.++++..
T Consensus 425 rg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 425 LGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHhh
Confidence 557999999999999988754
No 220
>PLN02656 tyrosine transaminase
Probab=98.91 E-value=6.1e-07 Score=102.35 Aligned_cols=315 Identities=12% Similarity=0.046 Sum_probs=169.4
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcc--cccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFG--HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~--~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ 476 (818)
.+|++..|.-.....+...+.+.+++.+.+..-. .+....+..+....+++.+....|.+ ..+.+++++++++|+..
T Consensus 32 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~ 111 (409)
T PLN02656 32 RVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDV 111 (409)
T ss_pred eeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHH
Confidence 6666655432222223226889999988776521 11111233455566666665533211 12579999999999888
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
++.... ..| ..|+.-+-+|.+.. ......|...
T Consensus 112 ~~~~l~-----~~g----------------d~Vlv~~p~y~~~~-~~~~~~g~~~------------------------- 144 (409)
T PLN02656 112 ALSMLA-----RPG----------------ANILLPRPGFPIYE-LCAAFRHLEV------------------------- 144 (409)
T ss_pred HHHHHh-----CCC----------------CeEEEeCCCCCcHH-HHHHHcCCEE-------------------------
Confidence 887651 222 25777777764321 1111111110
Q ss_pred CcceeecC-c-chhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCC
Q 003466 557 NSKWILSL-P-EWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGG 634 (818)
Q Consensus 557 ~~~~~v~~-P-~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG 634 (818)
..++. + +.+. .| .+.+++.+. ....+.+++-| ++-.|
T Consensus 145 ---~~i~~~~~~~~~-----------~d------------------~~~l~~~~~-------~~~~~v~l~~P--~NPtG 183 (409)
T PLN02656 145 ---RYVDLLPEKGWE-----------VD------------------LDAVEALAD-------QNTVALVIINP--GNPCG 183 (409)
T ss_pred ---EEEeCCCcCCCC-----------CC------------------HHHHHHHhc-------cCceEEEEECC--CCCCC
Confidence 00110 0 0000 01 144555553 23455666667 56677
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCc---EEEeccc-ccCCccccceeecc-----
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPD---IACYGKL-LTGGVIPLAATLAT----- 704 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PD---ivtlgKg-LggGy~PlsAvl~~----- 704 (818)
.+. +.+.+++|.++|++||+++|.||++..|--.|+.+ ....++-... +-.|||. ...| +-+|.++++
T Consensus 184 ~~~-s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG-lRiG~~i~~~~~~~ 261 (409)
T PLN02656 184 NVY-SYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPG-WRLGWFVTTDPSGS 261 (409)
T ss_pred CCC-CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcc-eeEEEEEEeCcccc
Confidence 766 78889999999999999999999998773333221 1111111111 2379998 4456 689989883
Q ss_pred ---hHHHhhccC-------ChH--------HHH------------------HHHHHHHHcCCCee-EEEeee-eEEEEEE
Q 003466 705 ---NAVFDSFVG-------DSK--------LWD------------------LELIQQISSHRTVQ-RVVALG-TLCAIEL 746 (818)
Q Consensus 705 ---~~i~~~l~~-------~~~--------~~~------------------~~l~~~l~~~~~v~-~vrg~G-l~~~iel 746 (818)
+++++.+.. .+. .+. +.+.+.|+.++... .++..| +++-+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l 341 (409)
T PLN02656 262 FRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKL 341 (409)
T ss_pred cccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEec
Confidence 455543321 111 111 01223344444322 123334 4444454
Q ss_pred ecCcccCCCchHHHHHHHHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 747 QAAGCNAGYGSLYAASLLKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 747 ~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.... ..... .....+.+.|.++||++.|+ .+.+|++.. .+++++++.+++|.+++...
T Consensus 342 ~~~~-~~~~~-~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 342 NLSL-LEDIS-DDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred chhh-cCCCC-CHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 3110 00000 01122346677899999984 257788776 37899999999999887643
No 221
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=98.90 E-value=3.5e-08 Score=112.86 Aligned_cols=163 Identities=12% Similarity=0.065 Sum_probs=107.6
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.+++++||++|+..++.... ..| .+||+....|+|.
T Consensus 54 ~~~p~~~~le~~lA~l~g~---~~~v~~~sG~~Ai~~al~~l~-----~~G----------------d~Vl~~~~~y~~t 109 (418)
T TIGR01326 54 LMNPTTDVLEQRIAALEGG---VAALAVASGQAAITYAILNLA-----QAG----------------DNIVSSSYLYGGT 109 (418)
T ss_pred CCChhHHHHHHHHHHHhCC---CeEEEEccHHHHHHHHHHHHh-----CCC----------------CEEEEECCCcHHH
Confidence 4567789999999999873 688999999999999998652 122 3688888888763
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
. ....-. .. ..| ...+.+| .+|
T Consensus 110 ~-~~~~~~-~~------------~~G-------------~~v~~v~--------------~~d----------------- 131 (418)
T TIGR01326 110 Y-NLFKHT-LK------------RLG-------------IEVRFVD--------------PDD----------------- 131 (418)
T ss_pred H-HHHHHH-HH------------HcC-------------cEEEEEC--------------CCC-----------------
Confidence 2 211000 00 000 0000001 111
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. +++++|++|.. ++..|.+.+ +++|.++|++||+++|+||++. .|. ......
T Consensus 132 -~~~l~~~l~--------~~t~~V~le~p-~NPtg~v~d----l~~I~~la~~~~i~livD~t~~-~~~-----~~~~l~ 191 (418)
T TIGR01326 132 -PEEFEKAID--------ENTKAVFAETI-GNPAINVPD----IEAIAEVAHAHGVPLIVDNTFA-TPY-----LCRPID 191 (418)
T ss_pred -HHHHHHhcC--------cCCeEEEEECC-CCCCCeecC----HHHHHHHHHHcCCEEEEECCCc-hhh-----cCCchh
Confidence 145666553 35678999986 777777665 8999999999999999999984 221 112223
Q ss_pred CCCcEE--EecccccC-Cccccceeecch
Q 003466 680 CVPDIA--CYGKLLTG-GVIPLAATLATN 705 (818)
Q Consensus 680 v~PDiv--tlgKgLgg-Gy~PlsAvl~~~ 705 (818)
..+|++ +++|.++| | ..+|.+++++
T Consensus 192 ~g~Divv~S~sK~l~g~G-~~lGg~v~~~ 219 (418)
T TIGR01326 192 HGADIVVHSATKYIGGHG-TAIGGVIVDG 219 (418)
T ss_pred cCCeEEEECccccccCCc-cceEEEEEec
Confidence 347887 68999997 6 6888877753
No 222
>PRK06290 aspartate aminotransferase; Provisional
Probab=98.90 E-value=3.1e-07 Score=104.82 Aligned_cols=313 Identities=13% Similarity=0.107 Sum_probs=176.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-C-CC-cEEEeCChhHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-W-AS-RAYFSDNGSTAI 474 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~-l~-~v~f~~SGseA~ 474 (818)
..||+.+|. ..++. .|.+.+++.+.+..... +. ..+..+....+++.+.+..+-. - .+ .+++++++.+|.
T Consensus 45 ~~i~L~~g~--p~~~~--~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al 119 (410)
T PRK06290 45 ELIDMGVGE--PDEMA--DESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPAL 119 (410)
T ss_pred CeEEcCCCC--CCCCC--CHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHH
Confidence 788887754 34442 57788888876643211 11 1344566667777776543311 0 13 588888888888
Q ss_pred HHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccc
Q 003466 475 EIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVF 554 (818)
Q Consensus 475 e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~ 554 (818)
..++... -..| ..|+...-+|.+....+ ...|..
T Consensus 120 ~~~~~~~-----~~~g----------------d~Vlv~~P~y~~~~~~~-~~~g~~------------------------ 153 (410)
T PRK06290 120 AMLPSCF-----INPG----------------DVTLMTVPGYPVTGTHT-KYYGGE------------------------ 153 (410)
T ss_pred HHHHHHh-----CCCC----------------CEEEEeCCCCccHHHHH-HHcCCE------------------------
Confidence 7777754 1222 36888888887643221 111111
Q ss_pred ccCcceeecCcchhhhhccccccccc-cCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEc-cccccC
Q 003466 555 MYNSKWILSLPEWLYSKIVEHKDITF-CSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIE-PVVHAA 632 (818)
Q Consensus 555 ~~~~~~~v~~P~~~~~~~~~~~~~~~-nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvE-PV~~g~ 632 (818)
.+.+|-.- +-.| .| .+.+++.+. .++.+|++. | ++-
T Consensus 154 ------v~~v~~~~--------~~~~~~d------------------~~~l~~~~~--------~~~k~i~l~nP--~NP 191 (410)
T PRK06290 154 ------VYNLPLLE--------ENNFLPD------------------LDSIPKDIK--------EKAKLLYLNYP--NNP 191 (410)
T ss_pred ------EEEEecCC--------CcCCcCC------------------HHHHHHhhc--------ccceEEEEECC--CCC
Confidence 01111000 0000 01 134444443 245566666 6 787
Q ss_pred CCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchh-cccCC-CCcE--EEeccccc-CCccccceeecchHH
Q 003466 633 GGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTA-DLLGC-VPDI--ACYGKLLT-GGVIPLAATLATNAV 707 (818)
Q Consensus 633 gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~-e~~gv-~PDi--vtlgKgLg-gGy~PlsAvl~~~~i 707 (818)
.|.+. +.+-+++|.++|++||+++|.||++..|--.+..-.+ +..+. ..+| -+|||.+| .| +-+|.+++++++
T Consensus 192 TG~v~-s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~G-lRiG~ii~~~~l 269 (410)
T PRK06290 192 TGAVA-TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTG-WRLAFVVGNELI 269 (410)
T ss_pred CCcCC-CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCch-hheEeEEeCHHH
Confidence 88777 8999999999999999999999999765211221111 11111 1123 38999996 56 688889999988
Q ss_pred HhhccCC-------h-H--------HH---------H-------HHHHHHHHcCCCeeEEEeeeeEE-EEEEecCcccCC
Q 003466 708 FDSFVGD-------S-K--------LW---------D-------LELIQQISSHRTVQRVVALGTLC-AIELQAAGCNAG 754 (818)
Q Consensus 708 ~~~l~~~-------~-~--------~~---------~-------~~l~~~l~~~~~v~~vrg~Gl~~-~iel~~~~~~~~ 754 (818)
++.+... . . .+ . +.+.+.|++++. .-....|.++ -+.+..... ..
T Consensus 270 ~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~p~g~f~l~v~lp~~~~-~~ 347 (410)
T PRK06290 270 VKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVGF-KAEMPGGTFYLYVKAPKGTK-SG 347 (410)
T ss_pred HHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCeeeEEEEECCCccc-cC
Confidence 8765321 0 0 00 0 112233444432 2122334443 345532200 00
Q ss_pred CchHHHHHHHHHHHhCCceE-eec---CCEEEEECCC-CChHHHHHHHHHHHHHHHHHHH
Q 003466 755 YGSLYAASLLKKLREDGVYM-RPL---GNVIYLMCGP-CSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 755 ~~~~~a~~~~~~l~e~Gvlv-~p~---g~~ir~~ppl-~~t~edId~~~~~l~~~l~~l~ 809 (818)
.....+..+++.|+++|+++ .|. ++.+|++... ..++++-++++++|++.|..++
T Consensus 348 ~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 348 IKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred CCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 00013567899999887554 453 3568887754 4678899999999999987664
No 223
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.90 E-value=1.7e-07 Score=108.34 Aligned_cols=178 Identities=11% Similarity=0.030 Sum_probs=99.9
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALII-EPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
+.+++.++. ...++ |++ ++ ..|+..+ +++|.++|+++|+++++|++| ++|..+.........
T Consensus 172 ~~L~~~l~~-----~~~~l--vi~~~s----~~g~~~d----i~~I~~i~~~~ga~l~vDaaq-~~G~i~~~~~~~~~~- 234 (452)
T PTZ00094 172 DKLEELAKA-----FRPKL--IIAGAS----AYPRDID----YKRFREICDSVGAYLMADIAH-TSGLVAAGVLPSPFP- 234 (452)
T ss_pred HHHHHHHHH-----hCCCE--EEEeCC----CCCCccC----HHHHHHHHHHcCCEEEEeccc-hhccccCCCCCCCCC-
Confidence 567777752 12233 333 44 3456665 899999999999999999999 677765421111111
Q ss_pred CCcEEEec--ccccCCccccceeecchHHHhh--------ccC----ChH------------HH---------------H
Q 003466 681 VPDIACYG--KLLTGGVIPLAATLATNAVFDS--------FVG----DSK------------LW---------------D 719 (818)
Q Consensus 681 ~PDivtlg--KgLggGy~PlsAvl~~~~i~~~--------l~~----~~~------------~~---------------~ 719 (818)
..|+++++ |.|+|-. .|.+++++++.+. +.. ... .+ .
T Consensus 235 ~~D~l~~S~hK~l~GP~--Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~ 312 (452)
T PTZ00094 235 YADVVTTTTHKSLRGPR--SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNA 312 (452)
T ss_pred CCcEEEcCCccCCCCCC--ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHH
Confidence 46888655 9887631 2445556544321 111 111 00 0
Q ss_pred HHHHHHHHcCCCeeEEEeee---eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee----------cCCEEEEECC
Q 003466 720 LELIQQISSHRTVQRVVALG---TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP----------LGNVIYLMCG 786 (818)
Q Consensus 720 ~~l~~~l~~~~~v~~vrg~G---l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p----------~g~~ir~~pp 786 (818)
+.+.+.|.+.+. .+.+.+ .+..+.+.... .....+...|.++||++.. ....+|+.++
T Consensus 313 ~~l~~~L~~~g~--~v~~~~~~~~~~~v~~~~~~-------~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~ 383 (452)
T PTZ00094 313 KALAAALEKRGY--DLVTGGTDNHLVLVDLRPFG-------ITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTP 383 (452)
T ss_pred HHHHHHHHhCCc--EEecCCCCCceEeecCCcCC-------CCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCH
Confidence 122233333221 121111 12222222111 1244566777778999952 1268999996
Q ss_pred CCCh----HHHHHHHHHHHHHHHHH
Q 003466 787 PCSS----PEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 787 l~~t----~edId~~~~~l~~~l~~ 807 (818)
...| ++||+++++.|.+++..
T Consensus 384 ~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 384 ALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 6554 99999999999999875
No 224
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.89 E-value=1.4e-07 Score=114.70 Aligned_cols=279 Identities=13% Similarity=0.078 Sum_probs=165.0
Q ss_pred CChhHHHHHHHHHhccCCCCCCcE-EEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 441 VYEPALECAELLLQGVGKGWASRA-YFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 441 ~~~~~~eLae~L~~~~~~~~l~~v-~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
+.+...+|++.|++++| ++.+ ++-+||+.|+.+++... |.|+..+|+ ++|+ +|....+-||+
T Consensus 541 ~lq~i~elq~~l~eLtG---md~~Sl~p~sGA~gE~A~Lmai-r~yh~~~Ge------------~~r~-~vLIp~saHgt 603 (954)
T PRK12566 541 YRAMIDELEAWLCAITG---FDAICMQPNSGAQGEYAGLLAI-RRYHRSRGQ------------SQRD-ICLIPSSAHGT 603 (954)
T ss_pred HHHHHHHHHHHHHHHHC---CCeEeecCCchHHHHHHHHHHH-HHHHHhcCC------------CCCC-EEEeccccccc
Confidence 34567799999999998 4555 45558999988888877 777776665 4454 45556688887
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
....+...|.. .+.+|..- -..+ |
T Consensus 604 Npasa~~~Gie------------------------------Vv~Vp~D~-----------~G~i--------D------- 627 (954)
T PRK12566 604 NPASAQMAGMR------------------------------VVIVECDP-----------DGNV--------D------- 627 (954)
T ss_pred CHHHHHHCCCE------------------------------EEEeccCC-----------CCCc--------C-------
Confidence 65443333221 11111000 0000 0
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-CcccCCccchhccc
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GFWRLGVETTADLL 678 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-GfGRtG~~~a~e~~ 678 (818)
.+.|++.+. ++.+++++|++--. ... |++. ..+++|.++|+++|+++++|=++. +.+.... -..
T Consensus 628 -le~L~a~I~-----~~~~~laaVmiT~P-nt~-Gv~e---~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~---Pg~- 692 (954)
T PRK12566 628 -LDDLKAKAA-----AAGDRLSCLMITYP-STH-GVYE---EGIREICEVVHQHGGQVYMDGANLNAQVGLAR---PAD- 692 (954)
T ss_pred -HHHHHHHhh-----ccCCCEEEEEEEec-CcC-ceec---chHHHHHHHHHHcCCEEEEEeeChhhccCCCC---hhh-
Confidence 256777775 34568888877653 343 4332 338999999999999999998885 2211111 112
Q ss_pred CCCCcEEEec--cccc----CCccc-cceeecchHHHhhccCC---------hH--------------------HHH---
Q 003466 679 GCVPDIACYG--KLLT----GGVIP-LAATLATNAVFDSFVGD---------SK--------------------LWD--- 719 (818)
Q Consensus 679 gv~PDivtlg--KgLg----gGy~P-lsAvl~~~~i~~~l~~~---------~~--------------------~~~--- 719 (818)
+-.|+++++ |.++ +| .| +|.+.+++.+...+... .+ ++.
T Consensus 693 -~GADi~~~s~HKtf~~P~G~G-GP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG 770 (954)
T PRK12566 693 -IGADVSHMNLHKTFCIPHGGG-GPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMG 770 (954)
T ss_pred -cCCCEEEecCCcccCcCccCC-CCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHC
Confidence 235888775 8664 45 35 45556677555444321 00 100
Q ss_pred --------------HHHHHHHHcCCCeeEEEee-e---eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEe----ec
Q 003466 720 --------------LELIQQISSHRTVQRVVAL-G---TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMR----PL 777 (818)
Q Consensus 720 --------------~~l~~~l~~~~~v~~vrg~-G---l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~----p~ 777 (818)
.-+.++|.+...+.. .+. | .-+.+.+..-+.. ....+..++++|++.||+.. |.
T Consensus 771 ~eLk~aa~~ailnAnYla~rL~~~~~v~~-~~~~~~~~hEfii~~~~l~~~---~g~~~~dvakRL~d~Gihapt~~fPv 846 (954)
T PRK12566 771 PQLADASEVAILSANYLANQLGGAFPVLY-RGRNERVAHECILDLRPLKAQ---TGISEEDVAKRLMDYGFHAPTMSFPV 846 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhCCCCc-CCCCCCeeeEEEEEccccccc---cCCCHHHHHHHHHHCCcEEeEEeecc
Confidence 012233333211211 111 1 1122222211100 00124668999999999875 44
Q ss_pred CCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhHH
Q 003466 778 GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVEE 813 (818)
Q Consensus 778 g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~~ 813 (818)
.+.+++.|.-..|++|||++++++....++++++.+
T Consensus 847 ~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~v~~ 882 (954)
T PRK12566 847 PGTLMVEPTESESKAELDRFVEAMLSIRAEIGKVQE 882 (954)
T ss_pred CCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 688999999999999999999999999999887754
No 225
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=98.89 E-value=2.9e-08 Score=97.01 Aligned_cols=165 Identities=18% Similarity=0.139 Sum_probs=105.4
Q ss_pred HHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCcccccc
Q 003466 446 LECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAME 525 (818)
Q Consensus 446 ~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als 525 (818)
.++.++++++++.+ .+.++++++|++|++.+++.+ + ..+.+|+..+..|||.......
T Consensus 3 ~~~~~~l~~~~~~~-~~~~~~~~~~t~a~~~~~~~~-~--------------------~~~~~v~~~~~~~~~~~~~~~~ 60 (170)
T cd01494 3 EELEEKLARLLQPG-NDKAVFVPSGTGANEAALLAL-L--------------------GPGDEVIVDANGHGSRYWVAAE 60 (170)
T ss_pred HHHHHHHHHHcCCC-CCcEEEeCCcHHHHHHHHHHh-C--------------------CCCCEEEEeecccceehhhHHH
Confidence 57788888888322 468999999999999999987 1 1134788888888876522111
Q ss_pred ccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHH
Q 003466 526 AQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYIS 605 (818)
Q Consensus 526 ~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le 605 (818)
..+... ..++.+... +.+ .. .+.++
T Consensus 61 ~~g~~~----------------------------~~v~~~~~~-----------~~~-------------~~---~~~~~ 85 (170)
T cd01494 61 LAGAKP----------------------------VPVPVDDAG-----------YGG-------------LD---VAILE 85 (170)
T ss_pred hcCCEE----------------------------EEeccCCCC-----------ccc-------------hh---hhhhh
Confidence 111110 001100000 000 00 01122
Q ss_pred HHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE
Q 003466 606 QNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA 685 (818)
Q Consensus 606 ~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv 685 (818)
+. ....+++++++++. +..+|...+ .++|.++|+++|+++|+||++.++...... .......+|++
T Consensus 86 ~~-------~~~~~~~~v~~~~~-~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~~~~~d~~ 151 (170)
T cd01494 86 EL-------KAKPNVALIVITPN-TTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG--VLIPEGGADVV 151 (170)
T ss_pred hc-------cccCceEEEEEecC-cCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc--cccccccCCEE
Confidence 21 23567899999997 788887775 499999999999999999999877554433 12223458999
Q ss_pred Eec--ccccCCccccceeec
Q 003466 686 CYG--KLLTGGVIPLAATLA 703 (818)
Q Consensus 686 tlg--KgLggGy~PlsAvl~ 703 (818)
+.| |.+++ .+.|.+++
T Consensus 152 ~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 152 TFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred EEEcccccCC--CceEEEEe
Confidence 888 99987 46666654
No 226
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.88 E-value=2.2e-07 Score=105.05 Aligned_cols=305 Identities=10% Similarity=0.031 Sum_probs=169.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e 475 (818)
.+||+..|.. .++ ..+.+.+++.+.+..... +....+..+....+++.+....|.+ ..+ .|+.++++.+|..
T Consensus 31 ~~i~l~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~ 106 (388)
T PRK07366 31 ELIDLSLGSS--DLP--APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTA 106 (388)
T ss_pred CeEEeCCCCC--CCC--CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHH
Confidence 6677765432 233 268899999887753211 1111233456666777776543321 124 5888888899988
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.++++. -..| ..|++.+-+|.+....+.. .|..
T Consensus 107 ~~~~~l-----~~~g----------------d~Vlv~~P~y~~~~~~~~~-~g~~------------------------- 139 (388)
T PRK07366 107 HLPLAV-----LNPG----------------DFALLLDPGYPSHAGGVYL-AGGQ------------------------- 139 (388)
T ss_pred HHHHHh-----CCCC----------------CEEEEcCCCCcchHHHHHh-cCCE-------------------------
Confidence 887765 1222 3688888888765422221 1111
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
.+++|-.. + + .|. .+ .+.+++.+. .+..+|++-+- ++-.|.
T Consensus 140 -----~~~v~~~~--------~---~----~~~--~d--------~~~l~~~~~--------~~~k~i~l~~p-~NPTG~ 180 (388)
T PRK07366 140 -----IYPMPLRA--------E---N----DFL--PV--------FADIPTEVL--------AQARLMVLSYP-HNPTTA 180 (388)
T ss_pred -----EEEEECCC--------c---c----CCC--CC--------HHHHHHhhc--------ccceEEEEeCC-CCCCCc
Confidence 01111000 0 0 000 00 123333332 12345555553 788888
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc-c-hhcccCCCCc--E--EEeccccc-CCccccceeecchHHH
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-T-TADLLGCVPD--I--ACYGKLLT-GGVIPLAATLATNAVF 708 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-~-a~e~~gv~PD--i--vtlgKgLg-gGy~PlsAvl~~~~i~ 708 (818)
+. +.+-+++|.++|++||+++|.||++.-|--.+.. . ....+.-.-+ | -+|||.+| .| +-+|.++++++++
T Consensus 181 ~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G-lRiG~~v~~~~li 258 (388)
T PRK07366 181 IA-PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG-FRIGFAIGNAQLI 258 (388)
T ss_pred cC-CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcc-hhheehcCCHHHH
Confidence 76 7889999999999999999999999766322321 1 1111111112 2 38999997 67 7899999999887
Q ss_pred hhccCC---------hH-------HHH-----------------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCC
Q 003466 709 DSFVGD---------SK-------LWD-----------------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGY 755 (818)
Q Consensus 709 ~~l~~~---------~~-------~~~-----------------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~ 755 (818)
+.+... .. .+. +.+.+.+++++........|.++-+.+...-
T Consensus 259 ~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~----- 333 (388)
T PRK07366 259 QALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPW----- 333 (388)
T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCccc-----
Confidence 755311 10 000 1122334444321111234555555553210
Q ss_pred chHHHHHHHHHH-HhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 756 GSLYAASLLKKL-REDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 756 ~~~~a~~~~~~l-~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
. ..+..++..| .++||++.|+ .+.+|++.. .+++++++.+++|.+.
T Consensus 334 ~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 334 Q-GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred C-CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 0 0134577666 4679999973 256787764 4689999999998764
No 227
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.88 E-value=8e-07 Score=102.12 Aligned_cols=317 Identities=15% Similarity=0.073 Sum_probs=171.5
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ 476 (818)
.+|++..|.-...-.+...+++.+|+.++++.... +....+..+....+++.+....+.+ .-+.|++++++++|...
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l 132 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEI 132 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHH
Confidence 67776654222211233357899999988865221 1112234455566666665432211 12579999999999998
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
+++.. ...| ..|+..+-+|......+ ...|...
T Consensus 133 ~~~~l-----~~~G----------------d~Vlv~~P~y~~y~~~~-~~~g~~~------------------------- 165 (430)
T PLN00145 133 IMSVL-----AQPG----------------ANILLPRPGYPLYEARA-VFSGLEV------------------------- 165 (430)
T ss_pred HHHHh-----cCCC----------------CEEEEcCCCCccHHHHH-HHcCCEE-------------------------
Confidence 88865 1222 26788777777633221 1111110
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMH 636 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~ 636 (818)
..++++.. ++ |. .| .+.+++.+. ....+.+++-| .+..|.+
T Consensus 166 ---~~~~~~~~-------------~~----~~--~d--------~~~l~~~~~-------~~~~~i~i~~P--~NPtG~v 206 (430)
T PLN00145 166 ---RHFDLLPE-------------RG----WE--VD--------LEGVEALAD-------ENTVAMVIINP--NNPCGSV 206 (430)
T ss_pred ---EEeeCCcc-------------cC----Cc--CC--------HHHHHHHhC-------cCceEEEEeCC--CCCCCCC
Confidence 00110000 00 00 00 145555553 23456777777 5667775
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCcE---EEeccc-ccCCccccceeecc--hHHH-
Q 003466 637 MVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPDI---ACYGKL-LTGGVIPLAATLAT--NAVF- 708 (818)
Q Consensus 637 ~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PDi---vtlgKg-LggGy~PlsAvl~~--~~i~- 708 (818)
. +.+.+++|.++|++||+++|.||++..|--.+.-+ ....++-...+ -.|||. +.-| +-+|.+++. +.++
T Consensus 207 ~-~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG-~RlG~iv~~~~~~~~~ 284 (430)
T PLN00145 207 Y-SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPG-WRLGWIATCDPNGILK 284 (430)
T ss_pred C-CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCC-eeEEEEEEecchhhhh
Confidence 5 88999999999999999999999997663222211 11111111122 279999 4456 688888862 2221
Q ss_pred -----hhc---cC----ChH--------HHH------------------HHHHHHHHcCCCeeE-EEeeeeEEE-EEEec
Q 003466 709 -----DSF---VG----DSK--------LWD------------------LELIQQISSHRTVQR-VVALGTLCA-IELQA 748 (818)
Q Consensus 709 -----~~l---~~----~~~--------~~~------------------~~l~~~l~~~~~v~~-vrg~Gl~~~-iel~~ 748 (818)
+.+ .. ... .+. +.+.+.|+.++.+.. .+..|.++. +.+..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~ 364 (430)
T PLN00145 285 ETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDL 364 (430)
T ss_pred hhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccCh
Confidence 111 00 000 110 112334455554432 234455443 33321
Q ss_pred CcccCCCchHHHHHHHHHH-HhCCceEeec---C--CEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 749 AGCNAGYGSLYAASLLKKL-REDGVYMRPL---G--NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 749 ~~~~~~~~~~~a~~~~~~l-~e~Gvlv~p~---g--~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
.. ..+......++.+| .++||++.|+ | +.+|++.. .+++++++.+++|.+.+.+..
T Consensus 365 ~~---~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~--~~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 365 SC---LSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA--IDPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred hh---cCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhc
Confidence 10 00000134566555 4779999984 2 67888776 478899999999998887654
No 228
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=98.88 E-value=2.3e-07 Score=102.87 Aligned_cols=305 Identities=15% Similarity=0.122 Sum_probs=175.3
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc-cccc-CCCC---CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF-GHVM-FPEN---VYEPALECAELLLQGVGKGWASRAYFSDNGSTAI 474 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~-~~~~---~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~ 474 (818)
-|+|..+..- - +|++.+++...+... +.-+ ...+ .....++.-+.++++++.. -+.++|+++|+|+|
T Consensus 3 iYlD~~ATTp------~-~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~-~~eIiFTSG~TEsn 74 (386)
T COG1104 3 IYLDNAATTP------V-DPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGAD-PEEIIFTSGATESN 74 (386)
T ss_pred ccccccccCC------C-CHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCC-CCeEEEecCCcHHH
Confidence 4777765222 1 799999999988875 3211 0000 1234445556777777754 37999999999999
Q ss_pred HHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccc
Q 003466 475 EIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVF 554 (818)
Q Consensus 475 e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~ 554 (818)
-.||+-++..+..+ .+++.||+-.- =|=....++.--. ..|.
T Consensus 75 NlaI~g~~~a~~~~---------------~~~~HIIts~i-EH~aVl~~~~~Le--------------~~g~-------- 116 (386)
T COG1104 75 NLAIKGAALAYRNA---------------QKGKHIITSAI-EHPAVLNTCRYLE--------------RQGF-------- 116 (386)
T ss_pred HHHHHhhHHhhhcc---------------cCCCeEEEccc-ccHHHHHHHHHHH--------------hcCC--------
Confidence 99999763333221 12234554333 2322222221110 0000
Q ss_pred ccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCC
Q 003466 555 MYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGG 634 (818)
Q Consensus 555 ~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG 634 (818)
+++|-+.+. + .. .-.+.|++.|. +++..|-+=-+ +++-|
T Consensus 117 ----------------------~Vtyl~V~~------~--G~--v~~e~L~~al~--------~~T~LVSim~a-NnE~G 155 (386)
T COG1104 117 ----------------------EVTYLPVDS------N--GL--VDLEQLEEALR--------PDTILVSIMHA-NNETG 155 (386)
T ss_pred ----------------------eEEEeCCCC------C--Ce--EcHHHHHHhcC--------CCceEEEEEec-ccCee
Confidence 011111100 0 00 00266777775 34556666666 88899
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEecc-cccCCccccceeecchHHHhh-c-
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGK-LLTGGVIPLAATLATNAVFDS-F- 711 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK-gLggGy~PlsAvl~~~~i~~~-l- 711 (818)
.+.| +++|.++|+++|++|.+|=|| .+|+.-- +......|+++||- -++|- =.+|++..++.+.=. +
T Consensus 156 ~IQp----I~ei~~i~k~~~i~fHvDAvQ-a~Gkipi----~~~~~~vD~ls~SaHK~~Gp-kGiGaLyv~~~~~~~p~i 225 (386)
T COG1104 156 TIQP----IAEIGEICKERGILFHVDAVQ-AVGKIPI----DLEELGVDLLSFSAHKFGGP-KGIGALYVRPGVRLEPLI 225 (386)
T ss_pred eccc----HHHHHHHHHHcCCeEEEehhh-hcCceec----cccccCcceEEeehhhccCC-CceEEEEECCCCccCcee
Confidence 9998 999999999999999999999 6766521 11222368998875 23331 235566655543211 1
Q ss_pred cCChH------------------------------------HHHHHHHHHHHcC-CCeeEEEe-----eeeEEEEEEecC
Q 003466 712 VGDSK------------------------------------LWDLELIQQISSH-RTVQRVVA-----LGTLCAIELQAA 749 (818)
Q Consensus 712 ~~~~~------------------------------------~~~~~l~~~l~~~-~~v~~vrg-----~Gl~~~iel~~~ 749 (818)
.++++ .+++.+.+.+... |.+. +.| .--.+.+-|..-
T Consensus 226 ~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~-~~g~~~~rlP~~~~~~f~gv 304 (386)
T COG1104 226 HGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVY-LNGDDEPRLPNILNFSFPGV 304 (386)
T ss_pred ccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEE-EcCCcccCCCCeEEEEeCCC
Confidence 11111 1223344444433 3321 111 122333333322
Q ss_pred cccCCCchHHHHHHHHHHHhCCceEee------------------------cCCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 750 GCNAGYGSLYAASLLKKLREDGVYMRP------------------------LGNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 750 ~~~~~~~~~~a~~~~~~l~e~Gvlv~p------------------------~g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
.+..+...|-.+||.+.. ....|||+.....|++|||.+++.|.+++
T Consensus 305 ---------~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i 375 (386)
T COG1104 305 ---------EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEII 375 (386)
T ss_pred ---------cHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 255566666677998863 12689999999999999999999999999
Q ss_pred HHHHHh
Q 003466 806 EEFDKV 811 (818)
Q Consensus 806 ~~l~~~ 811 (818)
+.++..
T Consensus 376 ~~lr~~ 381 (386)
T COG1104 376 KRLREL 381 (386)
T ss_pred HHHhhh
Confidence 888754
No 229
>PRK06234 methionine gamma-lyase; Provisional
Probab=98.88 E-value=1.1e-07 Score=108.23 Aligned_cols=171 Identities=14% Similarity=0.052 Sum_probs=105.9
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
+.++...+|+++|+++.+. +.++.++||++|+..++.... +.| ..||+... +|+.
T Consensus 61 ~~~p~~~~Le~~iA~~~g~---~~~l~~~sG~~Ai~~al~~ll-----~~G----------------d~Vl~~~~-~y~~ 115 (400)
T PRK06234 61 LGNPTSTEVENKLALLEGG---EAAVVAASGMGAISSSLWSAL-----KAG----------------DHVVASDT-LYGC 115 (400)
T ss_pred CCCccHHHHHHHHHHHhCC---CcEEEEcCHHHHHHHHHHHHh-----CCC----------------CEEEEecC-ccch
Confidence 3466778999999999873 578899999999988876441 222 25665554 5554
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
+....... ... .| .....++ .+|
T Consensus 116 ~~~~~~~~-~~~------------~G-------------~~v~~vd--------------~~d----------------- 138 (400)
T PRK06234 116 TFALLNHG-LTR------------YG-------------VEVTFVD--------------TSN----------------- 138 (400)
T ss_pred HHHHHHHH-Hhh------------CC-------------eEEEEEC--------------CCC-----------------
Confidence 43322110 000 00 0000000 111
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhc--CCcEEEeecccCcccCCccchhcc
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNR--KIPVIFDEVFTGFWRLGVETTADL 677 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~--gilLI~DEV~TGfGRtG~~~a~e~ 677 (818)
.+.+++.+. .+..+|++|.. .+..|.+.+ +++|.++|++| |+++|+||++. .+-.+..
T Consensus 139 -~e~l~~~i~--------~~tklI~iesP-~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~-~~~~~~~----- 198 (400)
T PRK06234 139 -LEEVRNALK--------ANTKVVYLETP-ANPTLKVTD----IKAISNIAHENNKECLVFVDNTFC-TPYIQRP----- 198 (400)
T ss_pred -HHHHHHHhc--------cCCeEEEEECC-CCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCC-chhcCCc-----
Confidence 144566553 24678999976 777787765 99999999997 99999999984 2222221
Q ss_pred cCCCCcEE--EecccccCCcccc-ceeecchHHHhhcc
Q 003466 678 LGCVPDIA--CYGKLLTGGVIPL-AATLATNAVFDSFV 712 (818)
Q Consensus 678 ~gv~PDiv--tlgKgLggGy~Pl-sAvl~~~~i~~~l~ 712 (818)
.+...|++ .++|.++|.-..+ |++++++++++.+.
T Consensus 199 l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~ 236 (400)
T PRK06234 199 LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVK 236 (400)
T ss_pred hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHH
Confidence 12246776 5779997621343 66888888877654
No 230
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.88 E-value=4.6e-07 Score=101.26 Aligned_cols=164 Identities=15% Similarity=0.208 Sum_probs=103.0
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCcEEEeccccc-CCcccc
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPDIACYGKLLT-GGVIPL 698 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PDivtlgKgLg-gGy~Pl 698 (818)
.+|++-.. ++-.|.+. +.+-+++|.++|++ ++++|.||++..|...+... ..+..+-..-+-+|||.++ .| +.+
T Consensus 156 k~i~l~~p-~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRi 231 (357)
T PRK14809 156 RIVYLTSP-HNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAG-LRL 231 (357)
T ss_pred cEEEEeCC-CCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcc-hhh
Confidence 34444443 78888877 66667778888765 78999999998775433211 1111111122448999998 67 799
Q ss_pred ceeecchHHHhhccCChH--------------H------HH----------HHHHHHHHcCCCeeEEEeeeeEEEEEEec
Q 003466 699 AATLATNAVFDSFVGDSK--------------L------WD----------LELIQQISSHRTVQRVVALGTLCAIELQA 748 (818)
Q Consensus 699 sAvl~~~~i~~~l~~~~~--------------~------~~----------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~ 748 (818)
|.+++++++++.+..... . +. +.+.+.+... .....|.++-+.+.
T Consensus 232 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~g~f~~~~~~- 306 (357)
T PRK14809 232 GYAVVPEEWADAYARVNTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP----TWESAGNFVLAEVG- 306 (357)
T ss_pred eeeecCHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc----cCCCCCCEEEEECC-
Confidence 999999988876642110 0 00 0011222211 12345666666552
Q ss_pred CcccCCCchHHHHHHHHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 749 AGCNAGYGSLYAASLLKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 749 ~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+ +..+++.|.++||++.++ .+.+|+... +++++++++++|.++++
T Consensus 307 ~----------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 D----------ASAVAEAAQERGVIVRDCTSFGLPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred C----------HHHHHHHHHHCCEEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 1 346778889999999984 257888743 47899999999988764
No 231
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=98.88 E-value=7.3e-07 Score=102.67 Aligned_cols=193 Identities=16% Similarity=0.158 Sum_probs=113.7
Q ss_pred CHHHHHHHHHhhhhccccc--C-CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccccccc
Q 003466 418 QIELARDMGYTAARFGHVM--F-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVD 494 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~--~-~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~ 494 (818)
++++++|+.+.+..+.... + .+...+....++++|+++++. +.+++++||+.|+..++... ..|
T Consensus 94 ~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~ga---e~alvv~sg~aAi~l~l~~l------~~G---- 160 (454)
T TIGR00474 94 AEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGA---EDALVVNNNAAAVLLALNTL------AKG---- 160 (454)
T ss_pred CHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHHHh------CCc----
Confidence 6999999999888764211 1 122345578899999999984 56778899999998888533 112
Q ss_pred ccCCCccccccceEEEEEcCCC---CCCccc--cccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhh
Q 003466 495 FLGKDTTEKCIELKVLALKGSY---HGDTLG--AMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLY 569 (818)
Q Consensus 495 ~~~~~~~~~~~r~~II~~~~sY---HG~t~~--als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~ 569 (818)
..||+.++.+ .|+... .+..+|.. .+.++
T Consensus 161 ------------deVIvs~~e~v~~ggs~~i~~~~~~~G~~------------------------------~~~v~---- 194 (454)
T TIGR00474 161 ------------KEVIVSRGELVEIGGSFRIPDVMEQSGAK------------------------------LVEVG---- 194 (454)
T ss_pred ------------CEEEECCChhhhhcchhhHHHHHHHcCCE------------------------------EEEeC----
Confidence 3677766653 221100 01111100 00000
Q ss_pred hhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEcccccc--CCC--cccCCHHHHHH
Q 003466 570 SKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHA--AGG--MHMVDPLFQRI 645 (818)
Q Consensus 570 ~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g--~gG--~~~~p~~fl~~ 645 (818)
+++. .. .+.+++.+. .++++|+++-. .. ..| ..++ +++
T Consensus 195 ----------~~~~----------~~-----l~dle~aI~--------~~T~lv~~~h~-sN~~~~G~~~~~d----l~~ 236 (454)
T TIGR00474 195 ----------TTNR----------TH-----LKDYEDAIT--------ENTALLLKVHT-SNYRIVGFTEEVS----IAE 236 (454)
T ss_pred ----------CCCC----------CC-----HHHHHHhcC--------cCCEEEEEEcc-CcccccCCCCCCC----HHH
Confidence 1110 00 144555553 34667676654 22 234 2444 999
Q ss_pred HHHHHHhcCCcEEEeecccCcccCCcc---ch------hcccCCCCcEEEec--ccccCCccccceeecchHHHhhcc
Q 003466 646 LVKECQNRKIPVIFDEVFTGFWRLGVE---TT------ADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSFV 712 (818)
Q Consensus 646 LreLc~~~gilLI~DEV~TGfGRtG~~---~a------~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l~ 712 (818)
|.++|++||+++|+|- |+|-.|.. +. .+....-.|++++| |.|+|.. .|+++++++.++.+.
T Consensus 237 I~~la~~~g~~vivD~---~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~--~G~i~g~~~~i~~l~ 309 (454)
T TIGR00474 237 LVALGREHGLPVMEDL---GSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ--AGIIVGKKELIERLK 309 (454)
T ss_pred HHHHHHHcCCeEEEEC---CCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe--EEEEEECHHHHHhhh
Confidence 9999999999999995 44444332 11 11122347999999 9998742 566788888776543
No 232
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=98.87 E-value=9.7e-07 Score=100.38 Aligned_cols=300 Identities=11% Similarity=0.063 Sum_probs=185.4
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhccccc-CCC-----CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVM-FPE-----NVYEPALECAELLLQGVGKGWASRAYFSDNGSTA 473 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~-~~~-----~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA 473 (818)
-|+|..+ .+.. +..|.+|+.+...++.... ... ..+....+.-++++++++....+.+.|+.+-++|
T Consensus 24 vylD~aa------~~~~-p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 24 VYLDNAA------TSQK-PQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred EEecCcc------cccC-CHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH
Confidence 4777554 3445 7889999998876543211 101 1123445555667777765323679999999999
Q ss_pred HHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcc
Q 003466 474 IEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTV 553 (818)
Q Consensus 474 ~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~ 553 (818)
.-.......+.. . ++ ..||+.+--+|....--..+... .|..
T Consensus 97 ln~va~~l~~~~--~---------------~g-deIv~s~~EH~sn~~pw~~~~~~--------------~Ga~------ 138 (405)
T COG0520 97 LNLVARGLGRSL--K---------------PG-DEIVVSDLEHHSNIVPWQELAKR--------------TGAK------ 138 (405)
T ss_pred HHHHHHHhhhhh--c---------------CC-CEEEEccCcchhhHHHHHHHHHh--------------cCcE------
Confidence 877766441111 1 12 47888888888755322222200 0100
Q ss_pred cccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCC
Q 003466 554 FMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAG 633 (818)
Q Consensus 554 ~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~g 633 (818)
+..+++.+. ..++ .+.++..+ .+++..|.+--+ ++.-
T Consensus 139 -----v~~i~~~~~-----------------g~~~------------~~~~~~~i--------~~~Tklvais~v-Sn~t 175 (405)
T COG0520 139 -----VRVIPLDDD-----------------GLLD------------LDALEKLI--------TPKTKLVALSHV-SNVT 175 (405)
T ss_pred -----EEEEecCCC-----------------CCcC------------HHHHHHhc--------CCCceEEEEECc-cccc
Confidence 001111000 0000 14455544 357788888887 8888
Q ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHHHhhc
Q 003466 634 GMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSF 711 (818)
Q Consensus 634 G~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l 711 (818)
|.+.| +++|.++|+++|+++++|=+|+ +|- . -.+.-.+..|+++|| |.|.|- .-+|+..+++++.+.+
T Consensus 176 G~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h-~---~idv~~l~~Df~afsgHKwl~gP-~GiGvLy~r~~~l~~l 245 (405)
T COG0520 176 GTVNP----VKEIAELAHEHGALVLVDAAQA-AGH-L---PIDVQELGCDFLAFSGHKWLLGP-TGIGVLYVRKELLEEL 245 (405)
T ss_pred cccch----HHHHHHHHHHcCCEEEEECccc-cCc-c---CCCchhcCCCEEEEcccccccCC-CceEEEEEchHHHhhc
Confidence 99988 9999999999999999999984 321 1 111122347888877 767764 3478888999998766
Q ss_pred cCChH--------------------------------------------------------HHHHHHHHHHHcCCCeeEE
Q 003466 712 VGDSK--------------------------------------------------------LWDLELIQQISSHRTVQRV 735 (818)
Q Consensus 712 ~~~~~--------------------------------------------------------~~~~~l~~~l~~~~~v~~v 735 (818)
.+... .+.+.+.+.++..+.+.-.
T Consensus 246 ~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~ 325 (405)
T COG0520 246 EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIY 325 (405)
T ss_pred CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 22100 0112234556666654322
Q ss_pred E----eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-------------CEEEEECCCCChHHHHHHHH
Q 003466 736 V----ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-------------NVIYLMCGPCSSPEVCSQLL 798 (818)
Q Consensus 736 r----g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-------------~~ir~~ppl~~t~edId~~~ 798 (818)
. ..+.++.+.+... .+..++..|-++||.++.+. ..+|+++.+-.|+||||+++
T Consensus 326 g~~~~~r~~~vsF~v~~~---------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~ 396 (405)
T COG0520 326 GPPDADRGGIVSFNVKGI---------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLL 396 (405)
T ss_pred cCCcccCceEEEEEeCCC---------CHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHH
Confidence 1 2566666666543 25678899999998888642 23999999999999999999
Q ss_pred HHHHHHHH
Q 003466 799 LKLYQRLE 806 (818)
Q Consensus 799 ~~l~~~l~ 806 (818)
++|++..+
T Consensus 397 ~aL~~~~~ 404 (405)
T COG0520 397 EALKKALA 404 (405)
T ss_pred HHHHHHhh
Confidence 99988764
No 233
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=98.87 E-value=2.6e-07 Score=102.77 Aligned_cols=162 Identities=16% Similarity=0.258 Sum_probs=96.7
Q ss_pred EEEEccccccCCCcccCCHHHHHHHHHHHHhc-CCcEEEeecccCcccCCccchhcccCCCC-cEE--Eeccccc-CCcc
Q 003466 622 ALIIEPVVHAAGGMHMVDPLFQRILVKECQNR-KIPVIFDEVFTGFWRLGVETTADLLGCVP-DIA--CYGKLLT-GGVI 696 (818)
Q Consensus 622 AVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~-gilLI~DEV~TGfGRtG~~~a~e~~gv~P-Div--tlgKgLg-gGy~ 696 (818)
.++..| +.-.|.+.+ . +++.++|+.+ |+++|+||++..|+. .... ...+..+ .++ +|||.+| .| +
T Consensus 148 v~~~~P--~NPtG~~~~-~---~~~~~l~~~~~~~~livDe~y~~~~~--~~~~-~~~~~~~~~i~~~S~SK~~~~~G-l 217 (353)
T PRK05387 148 IIFPNP--NAPTGIALP-L---AEIERILAANPDSVVVIDEAYVDFGG--ESAI-PLIDRYPNLLVVQTFSKSRSLAG-L 217 (353)
T ss_pred EEEeCC--CCCCCCCCC-H---HHHHHHHHhCCCcEEEEeCcccccCC--cchH-HHHhhCCCEEEEEehhHhhcchh-h
Confidence 566677 677888775 4 4445555544 999999999976742 1110 1111112 233 6999987 66 5
Q ss_pred ccceeecchHHHhhccCC-------h--H--------H------H----------HHHHHHHHHcCCCeeEEEeeeeEEE
Q 003466 697 PLAATLATNAVFDSFVGD-------S--K--------L------W----------DLELIQQISSHRTVQRVVALGTLCA 743 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~~-------~--~--------~------~----------~~~l~~~l~~~~~v~~vrg~Gl~~~ 743 (818)
.+|.+++++++.+.+... . . . + .+.+.+.+++++. .-....|.++-
T Consensus 218 R~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~ 296 (353)
T PRK05387 218 RVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALGF-EVLPSKANFVF 296 (353)
T ss_pred hceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC-eECCCcCcEEE
Confidence 888899998887654211 0 0 0 0 0112334444432 11122333433
Q ss_pred EEEecCcccCCCchHHHHHHHHHHHhCCceEeecC-----CEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 744 IELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG-----NVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 744 iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g-----~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+.+.. ..+..+++.|.++||++++.+ +.+|+... +++++++++++|.+++.
T Consensus 297 ~~~~~---------~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 297 ARHPS---------HDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred EECCC---------CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 33321 125578889999999997632 56888764 67999999999988754
No 234
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=98.86 E-value=2.9e-07 Score=103.92 Aligned_cols=287 Identities=12% Similarity=0.075 Sum_probs=161.1
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
..||+..|. +.+| - .|.+.+++.+. ....++ ..+...+|-++|++.++-. .+.|++++++++++..+++
T Consensus 53 ~~i~l~~n~--~p~~-~-~~~v~~a~~~~-~~~~~Y-----p~~~~~~lr~~ia~~~~~~-~~~I~~t~Ga~~~i~~~~~ 121 (380)
T PLN03026 53 DIVKLDANE--NPYG-P-PPEVLEALGNM-KFPYVY-----PDPESRRLRAALAEDSGLE-SENILVGCGADELIDLLMR 121 (380)
T ss_pred ceEEccCCC--CCCC-C-CHHHHHHHHhh-HhhccC-----CCCCHHHHHHHHHHHhCcC-hhhEEEcCCHHHHHHHHHH
Confidence 678877632 2344 3 68888888652 211111 1222456777787776532 3679999989999988877
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
.. -..| ..|+..+-+|..... .....|.+.
T Consensus 122 ~~-----~~~g----------------d~Vlv~~P~y~~y~~-~~~~~g~~~---------------------------- 151 (380)
T PLN03026 122 CV-----LDPG----------------DKIIDCPPTFGMYVF-DAAVNGAEV---------------------------- 151 (380)
T ss_pred Hh-----cCCC----------------CEEEEcCCChHHHHH-HHHHcCCEE----------------------------
Confidence 54 1222 257777777753211 111111110
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
..++....+ -.| .+.+++.+. ..++.+|++... ++..|.+.+
T Consensus 152 ~~v~~~~~~-----------~~d------------------~~~l~~~~~-------~~~~~~v~l~~P-~NPTG~~~~- 193 (380)
T PLN03026 152 IKVPRTPDF-----------SLD------------------VPRIVEAVE-------THKPKLLFLTSP-NNPDGSIIS- 193 (380)
T ss_pred EEeecCCCC-----------CcC------------------HHHHHHHHh-------ccCCcEEEEeCC-CCCCCCCCC-
Confidence 001100000 001 144555552 124456666654 788888875
Q ss_pred HHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCc-E--EEeccccc-CCccccceeecchHHHhhccCCh
Q 003466 640 PLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPD-I--ACYGKLLT-GGVIPLAATLATNAVFDSFVGDS 715 (818)
Q Consensus 640 ~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD-i--vtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~ 715 (818)
.+++.++++.. +++|+||++..|...+... ....-.+. + -+|||.+| .| +-+|.+++++++++.+....
T Consensus 194 ---~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~--~~~~~~~~viv~~SfSK~~glaG-lRiGy~~~~~~~i~~l~~~~ 266 (380)
T PLN03026 194 ---DDDLLKILELP-ILVVLDEAYIEFSTQESRM--KWVKKYDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAK 266 (380)
T ss_pred ---HHHHHHHHhcC-CEEEEECcchhhcCCcchH--HHHHhCCCEEEEecchHhhcCcc-ccceeeecCHHHHHHHHHhc
Confidence 45666666654 8999999998774322211 11111222 2 38999998 77 68899999998887653211
Q ss_pred --H------------HH----------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHH
Q 003466 716 --K------------LW----------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLK 765 (818)
Q Consensus 716 --~------------~~----------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~ 765 (818)
. .+ ++.+.+.|+.++.+.-....|.++-+.+... ..+..+++
T Consensus 267 ~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~--------~~~~~~~~ 338 (380)
T PLN03026 267 QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSG--------RDAKKLKE 338 (380)
T ss_pred CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCC--------CCHHHHHH
Confidence 0 00 0123344555543321223455555554321 12456888
Q ss_pred HHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 766 KLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 766 ~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
.|.++||++++. .+.+|++.. ++++.++++++|++
T Consensus 339 ~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~ 378 (380)
T PLN03026 339 DLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQ 378 (380)
T ss_pred HHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHH
Confidence 999999999874 257888765 57788888888865
No 235
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.86 E-value=2.5e-07 Score=102.47 Aligned_cols=165 Identities=16% Similarity=0.143 Sum_probs=106.7
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcE---EEeccccc-CCcc
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDI---ACYGKLLT-GGVI 696 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDi---vtlgKgLg-gGy~ 696 (818)
..+++-| ++-.|.+. +.+.+++|.++|+++|+++|.||++..|....... .+.-.+.+ -+|||.+| .| +
T Consensus 127 ~v~l~nP--~NPTG~~~-s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~---~~~~~~~vi~~~SfSK~~gl~G-l 199 (330)
T PRK05664 127 VLVVVNP--NNPTGRRF-DPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLA---ACAHRPGLIVLRSFGKFFGLAG-A 199 (330)
T ss_pred EEEEeCC--cCCCCCcc-CHHHHHHHHHHHHhcCCEEEEECCcccCCCccccc---ccccCCCEEEEeeccccccCCC-c
Confidence 4677888 56778766 77889999999999999999999997663211111 11112333 38999998 78 7
Q ss_pred ccceeecchHHHhhccCCh------H--------HH----------------HHHHHHHHHcCCCeeEEEe-eeeEEEEE
Q 003466 697 PLAATLATNAVFDSFVGDS------K--------LW----------------DLELIQQISSHRTVQRVVA-LGTLCAIE 745 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~~~------~--------~~----------------~~~l~~~l~~~~~v~~vrg-~Gl~~~ie 745 (818)
-+|.+++++++++.+.... . .+ ++.+.+.+++++. .+.+ .+.++-+.
T Consensus 200 RiG~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~~~~~~f~~~~ 277 (330)
T PRK05664 200 RLGFVLAEPALLRALAELLGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHGL--TPAGGCALFQWVR 277 (330)
T ss_pred ceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCCC--cccCCcceEEEEe
Confidence 9999999998887654211 0 00 0123334444432 1112 11232222
Q ss_pred EecCcccCCCchHHHHHHHHHHHhCCceEeecC--CEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 746 LQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG--NVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 746 l~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g--~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
+ . .+..+++.|.++||+++..+ +.+|++... ++++.++++++|++..++
T Consensus 278 ~--~---------~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 278 T--E---------DAAALHEFLARRGILTRLFEQPASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred c--C---------CHHHHHHHHHHCCeEEEECCCCCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 2 1 14578889999999998743 678887653 578888888888776554
No 236
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.86 E-value=1.2e-07 Score=108.76 Aligned_cols=161 Identities=14% Similarity=0.157 Sum_probs=104.9
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.|. +.+++++||+.|+..+++... +.| ..||+....|+|.
T Consensus 60 ~~~p~~~~le~~lA~l~g~---~~al~~~SG~~Ai~~al~all-----~pG----------------d~VIv~~~~y~~t 115 (427)
T PRK05994 60 ITNPTNAVLEERVAALEGG---TAALAVASGHAAQFLVFHTLL-----QPG----------------DEFIAARKLYGGS 115 (427)
T ss_pred CCCccHHHHHHHHHHHhCC---CcEEEEcCHHHHHHHHHHHHh-----CCC----------------CEEEEecCcchhH
Confidence 3466788999999999874 578899999999999998652 122 3688888888774
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
... +... ....|. ..+.++ .+|
T Consensus 116 ~~~-~~~~-------------~~~~G~-------------~v~~vd--------------~~d----------------- 137 (427)
T PRK05994 116 INQ-FGHA-------------FKSFGW-------------QVRWAD--------------ADD----------------- 137 (427)
T ss_pred HHH-HHHH-------------HHhcCc-------------EEEEEC--------------CCC-----------------
Confidence 211 0000 000000 000000 011
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .++.+|++|.+ .+..|.+.+ +++|.++|++||+++|+||+++. |. ....+.
T Consensus 138 -~~~l~~ai~--------~~tklV~vesp-~NptG~v~d----l~~I~~la~~~gi~livD~a~a~----~~--~~~pl~ 197 (427)
T PRK05994 138 -PASFERAIT--------PRTKAIFIESI-ANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLAS----PY--LIRPIE 197 (427)
T ss_pred -HHHHHHhcC--------cCCeEEEEECC-CCCCCeecC----HHHHHHHHHHcCCEEEEECCccc----cc--cCCccc
Confidence 144555553 35789999986 788888775 89999999999999999999952 21 123344
Q ss_pred CCCcEEE--ecccccC-Cccccceeec
Q 003466 680 CVPDIAC--YGKLLTG-GVIPLAATLA 703 (818)
Q Consensus 680 v~PDivt--lgKgLgg-Gy~PlsAvl~ 703 (818)
.-+|+++ +.|.+|| | -++|++++
T Consensus 198 ~gaDivv~S~tK~lgg~~-~~~gG~v~ 223 (427)
T PRK05994 198 HGADIVVHSLTKFLGGHG-NSMGGIIV 223 (427)
T ss_pred cCCcEEEEcCccccCCCC-CcEEEEEE
Confidence 5688875 8899986 3 35665554
No 237
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=98.85 E-value=8.8e-07 Score=101.12 Aligned_cols=321 Identities=14% Similarity=0.057 Sum_probs=173.8
Q ss_pred EeCCcCccccceeeccccccccc--CCCCCCHHHHHHHHHhhhhc--ccccCCCCCChhHHHHHHHHHhccC------CC
Q 003466 390 YQDQKNKFIGQQFDACASWWTQG--PDATLQIELARDMGYTAARF--GHVMFPENVYEPALECAELLLQGVG------KG 459 (818)
Q Consensus 390 ~D~dG~~~~~~ylD~~sg~~~~~--lGh~~hp~V~eAi~~q~~~~--~~~~~~~~~~~~~~eLae~L~~~~~------~~ 459 (818)
.+..|+ .+||+..|.-... +- - .+.+.+++.+.+... ..+.-..+..+....+++.+.+..+ ..
T Consensus 28 ~~~~~~----~~i~l~~g~p~~~~~~~-p-~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~ 101 (412)
T PTZ00433 28 PSPSPK----SIIKLSVGDPTLDGNLL-T-PAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKST 101 (412)
T ss_pred cCCCCC----CeeecCCcCCCCcCCCC-C-CHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCC
Confidence 334666 7888877643211 11 2 678899988877641 1111112344556666666654321 00
Q ss_pred -CCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCC
Q 003466 460 -WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQ 538 (818)
Q Consensus 460 -~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~ 538 (818)
..+.+++++++++|+..+++.. ...| ..|++..-+|.+.... ....|...
T Consensus 102 ~~~~~i~it~G~~~al~~~~~~~-----~~~g----------------d~vlv~~P~y~~~~~~-~~~~g~~~------- 152 (412)
T PTZ00433 102 IKKDNVVLCSGVSHAILMALTAL-----CDEG----------------DNILVPAPGFPHYETV-CKAYGIEM------- 152 (412)
T ss_pred CChhhEEEeCChHHHHHHHHHHh-----cCCC----------------CEEEEccCCcccHHHH-HHHcCCEE-------
Confidence 0257999999999999988865 1122 2677777777763321 11111110
Q ss_pred CcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCC
Q 003466 539 PWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSG 618 (818)
Q Consensus 539 p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~ 618 (818)
..++.... ++ |. -+ .+.+++.+. .
T Consensus 153 ---------------------~~i~~~~~-------------~~----~~--~d--------~~~l~~~~~--------~ 176 (412)
T PTZ00433 153 ---------------------RFYNCRPE-------------KD----WE--AD--------LDEIRRLVD--------D 176 (412)
T ss_pred ---------------------EEEecCcc-------------cc----Cc--CC--------HHHHHHHhc--------c
Confidence 00111000 00 00 00 144555543 1
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc-chhcccCCC-CcEE--Eeccccc-C
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-TTADLLGCV-PDIA--CYGKLLT-G 693 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-~a~e~~gv~-PDiv--tlgKgLg-g 693 (818)
++.+|++..- ++-.|... +.+-+++|.++|++||+++|.||++..|-..|.. .....+.-. +-++ +|||.+| .
T Consensus 177 ~~~~i~~~~p-~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p 254 (412)
T PTZ00433 177 RTKALIMTNP-SNPCGSNF-SRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVP 254 (412)
T ss_pred CceEEEEeCC-CCCCCccc-CHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCC
Confidence 3445555332 67778666 7888999999999999999999999876323321 111111111 1232 7899985 5
Q ss_pred Cccccceeec------chHHHhhccC-------ChH--------HHH------------------HHHHHHHHcCCCeeE
Q 003466 694 GVIPLAATLA------TNAVFDSFVG-------DSK--------LWD------------------LELIQQISSHRTVQR 734 (818)
Q Consensus 694 Gy~PlsAvl~------~~~i~~~l~~-------~~~--------~~~------------------~~l~~~l~~~~~v~~ 734 (818)
| +-+|.+++ .+++++.+.. ... .+. +.+.+.|+.+..+.-
T Consensus 255 G-lRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 333 (412)
T PTZ00433 255 G-WRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSP 333 (412)
T ss_pred C-eeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 6 78888886 2445543321 011 110 012233333322322
Q ss_pred EEee-eeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 735 VVAL-GTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 735 vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
+... |.++-+.+.... . .+.....++++.|+ ++||++.|+ .+.+|++.. ..++++++.+++|.++++.
T Consensus 334 ~~p~gg~f~~~~l~~~~--~-~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 334 TMPRGSMFLMSRLDLEK--F-RDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS--RPVEVLREAVERIKAFCER 408 (412)
T ss_pred cCCCeeEEEEEEechhh--c-CCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 3333 444444553210 0 00001456888887 579999984 256777765 3478999999999998876
Q ss_pred HH
Q 003466 808 FD 809 (818)
Q Consensus 808 l~ 809 (818)
..
T Consensus 409 ~~ 410 (412)
T PTZ00433 409 HK 410 (412)
T ss_pred hc
Confidence 54
No 238
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.84 E-value=2.9e-07 Score=102.96 Aligned_cols=290 Identities=16% Similarity=0.162 Sum_probs=167.6
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
+++|+..+ .+.+|. +|.+.+|+.+.+..+..+. .+...+|-+.++++++-. -+.++++++++++...+++
T Consensus 20 ~~~~l~~~--~~~~~~--p~~~~~a~~~~~~~~~~Y~-----~~~~~~lr~~ia~~~~~~-~~~i~it~Ga~~~l~~~~~ 89 (354)
T PRK06358 20 MILDFSAN--INPLGV--PESLKQAITENLDKLVEYP-----DPDYLELRKRIASFEQLD-LENVILGNGATELIFNIVK 89 (354)
T ss_pred ceEEecCC--CCCCCC--CHHHHHHHHHHHHhhhcCC-----CccHHHHHHHHHHHhCCC-hhhEEECCCHHHHHHHHHH
Confidence 57888653 234454 6899999998776543222 112345556666655432 3689999999999888877
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
.. . + ..|+..+-+|+.....+ ...|...
T Consensus 90 ~~-----~----------------~--~~v~i~~P~y~~~~~~~-~~~g~~~---------------------------- 117 (354)
T PRK06358 90 VT-----K----------------P--KKVLILAPTFAEYERAL-KAFDAEI---------------------------- 117 (354)
T ss_pred Hh-----C----------------C--CcEEEecCChHHHHHHH-HHcCCee----------------------------
Confidence 53 1 1 26788888887643222 1111110
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEE-EEEccccccCCCcccC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGA-LIIEPVVHAAGGMHMV 638 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV~~g~gG~~~~ 638 (818)
+.+|- ++ +..|. .| .+.++ .+. . ++.+ ++.-| ++-.|...
T Consensus 118 --~~~~~--------------~~-~~~~~--~d--------~~~~~-~~~-------~-~~~~v~~~~P--~NPtG~~~- 158 (354)
T PRK06358 118 --EYAEL--------------TE-ETNFA--AN--------EIVLE-EIK-------E-EIDLVFLCNP--NNPTGQLI- 158 (354)
T ss_pred --EEEeC--------------cc-ccCCC--cc--------HHHHH-hhc-------c-CCCEEEEeCC--CCCCCCcc-
Confidence 01110 00 00000 00 01112 222 1 2333 46677 67778766
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCcE---EEeccccc-CCccccceeecc-hHHHhhcc
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPDI---ACYGKLLT-GGVIPLAATLAT-NAVFDSFV 712 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PDi---vtlgKgLg-gGy~PlsAvl~~-~~i~~~l~ 712 (818)
+.+-+++|.++|++||+++|.||+...|-..+... .....+-.+.+ -+|||.+| .| +.+|.++++ +.+++.+.
T Consensus 159 ~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~ 237 (354)
T PRK06358 159 SKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPG-LRLGYGLTSNKNLAEKLL 237 (354)
T ss_pred CHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcc-hhheeeecCCHHHHHHHH
Confidence 88999999999999999999999998774333211 11122222333 37999998 78 799999874 66655443
Q ss_pred CCh--H------------HH----------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHH
Q 003466 713 GDS--K------------LW----------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAAS 762 (818)
Q Consensus 713 ~~~--~------------~~----------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~ 762 (818)
... . .+ .+.+.+.|++++.+.-....|.++-+.+.. ...
T Consensus 238 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~~-----------~~~ 306 (354)
T PRK06358 238 QMREPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLEK-----------PID 306 (354)
T ss_pred HhCCCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcCc-----------hHH
Confidence 210 0 11 012334455554433233445544444421 246
Q ss_pred HHHHHHhCCceEeec----C---CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 763 LLKKLREDGVYMRPL----G---NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 763 ~~~~l~e~Gvlv~p~----g---~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+++.|.++||.++++ + +.+|+.. -++++.++++++|++.+
T Consensus 307 ~~~~l~~~gI~v~~~~~f~~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 307 LRKELLKKGILIRSCSNYRGLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHCCeEEEECCCCCCCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 888999999999983 1 4577774 45789999999987764
No 239
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=98.84 E-value=1.2e-06 Score=99.26 Aligned_cols=302 Identities=10% Similarity=0.007 Sum_probs=168.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCC--CC-CcEEEeCChhHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG--WA-SRAYFSDNGSTAIEI 476 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~--~l-~~v~f~~SGseA~e~ 476 (818)
.+||+..|.. .++ - .+.+.+++.+.+.....+.-..+..+....+++.+.+..+-. .. +.++.++++++|...
T Consensus 30 ~~i~l~~~~p--~~~-~-~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~ 105 (396)
T PRK09147 30 PPISLSIGEP--KHP-T-PAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFA 105 (396)
T ss_pred CeEecCCCCC--CCC-C-CHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHH
Confidence 7888876542 233 2 578888888766543322222334556677777776543421 01 378899999999988
Q ss_pred HHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccccc
Q 003466 477 ALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMY 556 (818)
Q Consensus 477 ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~ 556 (818)
+++... ..| .....|++..-+|.+.... ....|.+
T Consensus 106 ~~~~l~-----~~~-------------~~gd~vlv~~P~y~~~~~~-~~~~g~~-------------------------- 140 (396)
T PRK09147 106 FAQTVI-----DRD-------------GPGPLVVCPNPFYQIYEGA-ALLAGAE-------------------------- 140 (396)
T ss_pred HHHHHc-----CCC-------------CCCCEEEEcCCCccchHHH-HHhcCCE--------------------------
Confidence 888651 110 0023677777777653221 1111111
Q ss_pred CcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCCc
Q 003466 557 NSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALII-EPVVHAAGGM 635 (818)
Q Consensus 557 ~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG~ 635 (818)
.+.+|-.. +..|. .| .+.+++.+. .++.++++ .| ++-.|.
T Consensus 141 ----~~~vp~~~---------------~~~~~--~d--------~~~l~~~~~--------~~~k~i~l~nP--~NPTG~ 181 (396)
T PRK09147 141 ----PYFLNCDP---------------ANNFA--PD--------FDAVPAEVW--------ARTQLLFVCSP--GNPTGA 181 (396)
T ss_pred ----EEEeccCc---------------cccCc--cC--------HHHHHHHHh--------hccEEEEEcCC--CCCcCc
Confidence 11111000 00000 00 134444442 13445554 44 788888
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc--cch-h---cccCC-CCc----EEEeccccc-CCccccceeec
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV--ETT-A---DLLGC-VPD----IACYGKLLT-GGVIPLAATLA 703 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~--~~a-~---e~~gv-~PD----ivtlgKgLg-gGy~PlsAvl~ 703 (818)
+. +.+.+++|.++|++||+++|.||++.-|--.+. ... . ...+. ..| +-+|||.++ .| +-+|.+++
T Consensus 182 ~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G-lRiG~~~~ 259 (396)
T PRK09147 182 VL-PLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG-LRSGFVAG 259 (396)
T ss_pred cC-CHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCcc-ceeeeecC
Confidence 77 899999999999999999999999976521221 111 1 11111 112 237999754 45 78888999
Q ss_pred chHHHhhccCCh--------H--------HH-------------H---HHHHHHHHcCCCeeE-EEeeeeEEEEEEecCc
Q 003466 704 TNAVFDSFVGDS--------K--------LW-------------D---LELIQQISSHRTVQR-VVALGTLCAIELQAAG 750 (818)
Q Consensus 704 ~~~i~~~l~~~~--------~--------~~-------------~---~~l~~~l~~~~~v~~-vrg~Gl~~~iel~~~~ 750 (818)
++++++.+.... . .+ . +.+.+.+..+ +.- .-..|.++-+++..+
T Consensus 260 ~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~~~- 336 (396)
T PRK09147 260 DAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVPGD- 336 (396)
T ss_pred CHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECCCC-
Confidence 998877553110 0 00 0 0112223322 111 123455665655311
Q ss_pred ccCCCchHHHHHHHHHHH-hCCceEeec-------------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 751 CNAGYGSLYAASLLKKLR-EDGVYMRPL-------------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 751 ~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
...+++.|+ ++||.+.|+ .+.+|+... .+++++++++++|.+.+
T Consensus 337 ---------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 337 ---------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLAECVEAAERIVDFC 394 (396)
T ss_pred ---------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 345777776 679999763 246777665 45788999999888765
No 240
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=98.84 E-value=1.1e-07 Score=107.84 Aligned_cols=170 Identities=12% Similarity=0.084 Sum_probs=105.3
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
+.++...+|+++|+++.+. +.+++++||+.|+..++.... ..| ..||+-+. .||.
T Consensus 56 ~~~p~~~~le~~lA~l~g~---~~av~~~sG~~Ai~~~l~al~-----~~G----------------d~Vi~~~~-~y~~ 110 (391)
T TIGR01328 56 LGNPTVSNLEGRIAFLEGT---EAAVATSSGMGAIAATLLTIL-----KAG----------------DHLISDEC-LYGC 110 (391)
T ss_pred CCCchHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHHHHh-----CCC----------------CEEEEecC-cchH
Confidence 4567788999999999984 568899999999998886541 122 24665554 4454
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
+.......-.. .|.. +.|.|.+ +
T Consensus 111 t~~~~~~~~~~-------------~G~~------------------------------~~~vd~~-------d------- 133 (391)
T TIGR01328 111 TFALLEHALTK-------------FGIQ------------------------------VDFINMA-------I------- 133 (391)
T ss_pred HHHHHHHHHhc-------------CCeE------------------------------EEEECCC-------C-------
Confidence 43322111000 0000 0011210 0
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .++.+|++|.. .+..|.+.+ +++|.++|+++|+++|+||++. .+..+.. .+
T Consensus 134 -~e~l~~~i~--------~~tklV~le~p-~Np~G~v~d----l~~I~~la~~~gi~livD~a~a-~~~~~~~-----~~ 193 (391)
T TIGR01328 134 -PEEVKAHIK--------DNTKIVYFETP-ANPTMKLID----MERVCRDAHSQGVKVIVDNTFA-TPMLTNP-----VA 193 (391)
T ss_pred -HHHHHHhhc--------cCCeEEEEECC-CCCCCcccC----HHHHHHHHHHcCCEEEEECCCc-hhccCCc-----hh
Confidence 144555553 35678999976 677777665 8999999999999999999984 3233321 22
Q ss_pred CCCcEE--EecccccC-Cccc-cceeecchHHHhhcc
Q 003466 680 CVPDIA--CYGKLLTG-GVIP-LAATLATNAVFDSFV 712 (818)
Q Consensus 680 v~PDiv--tlgKgLgg-Gy~P-lsAvl~~~~i~~~l~ 712 (818)
.-.|++ +++|.+|| | .+ .|++++++++++.+.
T Consensus 194 ~g~Divv~S~sK~lgg~g-~~~gG~v~~~~~li~~l~ 229 (391)
T TIGR01328 194 LGVDVVVHSATKYIGGHG-DVVAGLICGKAELLQQIR 229 (391)
T ss_pred cCCCEEEccccccccCCC-CceEEEEEcCHHHHHHHH
Confidence 346776 57899986 3 34 356777888776543
No 241
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=98.84 E-value=1.5e-07 Score=106.83 Aligned_cols=81 Identities=16% Similarity=0.135 Sum_probs=55.6
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCcc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVI 696 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~ 696 (818)
++.+|++|.. .+..|.+.+ +++|.++|++||+++|+||++.. +...... .+| .|++ .++|.++|.-.
T Consensus 146 ~tklV~ie~p-~NptG~v~d----l~~I~~la~~~gi~livD~t~~~-~~~~~pl---~~g--~Divv~S~sK~~~g~g~ 214 (390)
T PRK08133 146 NTKLFFLETP-SNPLTELAD----IAALAEIAHAAGALLVVDNCFCT-PALQQPL---KLG--ADVVIHSATKYLDGQGR 214 (390)
T ss_pred CCeEEEEECC-CCCCCCcCC----HHHHHHHHHHcCCEEEEECCCcc-cccCCch---hhC--CcEEEeecceeecCCcc
Confidence 5678999976 677787765 89999999999999999999842 1111111 123 4776 57799976324
Q ss_pred cc-ceeecchHHHhh
Q 003466 697 PL-AATLATNAVFDS 710 (818)
Q Consensus 697 Pl-sAvl~~~~i~~~ 710 (818)
.+ |++++++++++.
T Consensus 215 ~~GG~vv~~~~~~~~ 229 (390)
T PRK08133 215 VLGGAVVGSKELMEE 229 (390)
T ss_pred eEeEEEEcCHHHHHH
Confidence 55 556677766543
No 242
>PRK06855 aminotransferase; Validated
Probab=98.84 E-value=9.2e-07 Score=101.72 Aligned_cols=302 Identities=14% Similarity=0.083 Sum_probs=165.7
Q ss_pred CHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhccccccc
Q 003466 418 QIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVD 494 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~ 494 (818)
++.+.+++.+.+..... +....+..+....+++.+.+..+.. ..+.|++++++.+|...++.++ ..|
T Consensus 50 p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~l~------~~G---- 119 (433)
T PRK06855 50 PDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGLL------RRE---- 119 (433)
T ss_pred CHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHHhc------CCC----
Confidence 66788888876643211 1112344566777888876643311 1257999999999988877532 122
Q ss_pred ccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccc
Q 003466 495 FLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVE 574 (818)
Q Consensus 495 ~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~ 574 (818)
..|++.+-+|++.........+.. .+.+|-...
T Consensus 120 ------------d~Vlv~~P~Y~~~~~~~~~~~g~~------------------------------~v~v~~~~~----- 152 (433)
T PRK06855 120 ------------ARVIGPSPAYSTHSSAEAAHAGYP------------------------------PVTYRLDPE----- 152 (433)
T ss_pred ------------CeEEEeCCCCchHHHHHHHhcCCe------------------------------EEEEecccc-----
Confidence 368999999998432111111111 000110000
Q ss_pred cccccc-cCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhc
Q 003466 575 HKDITF-CSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNR 653 (818)
Q Consensus 575 ~~~~~~-nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~ 653 (818)
++ | .| .+.+++.+.. ++..-+.+++.| ++-.|.+. +.+.+++|.++|++|
T Consensus 153 -~~--~~~d------------------~~~l~~~~~~-----~~~~~~i~l~~P--~NPTG~~~-s~~~~~~l~~~a~~~ 203 (433)
T PRK06855 153 -NN--WYPD------------------LDDLENKVKY-----NPSIAGILLINP--DNPTGAVY-PKEILREIVDIAREY 203 (433)
T ss_pred -cC--CCCC------------------HHHHHHHHhc-----CCCceEEEEECC--CCCCCcCC-CHHHHHHHHHHHHHc
Confidence 00 0 01 2556666642 222344566777 67778766 899999999999999
Q ss_pred CCcEEEeecccCcccCCccchhcccCCCCc---E--EEeccccc-CCccccceeecc-----h---HHHhhccC------
Q 003466 654 KIPVIFDEVFTGFWRLGVETTADLLGCVPD---I--ACYGKLLT-GGVIPLAATLAT-----N---AVFDSFVG------ 713 (818)
Q Consensus 654 gilLI~DEV~TGfGRtG~~~a~e~~gv~PD---i--vtlgKgLg-gGy~PlsAvl~~-----~---~i~~~l~~------ 713 (818)
|+++|.||++..|-..|..+.. ...+.+| | -.|||.++ .| +-+|.+++. + .+++.+..
T Consensus 204 ~~~II~De~Y~~l~~~~~~~~s-l~~~~~~~~~I~~~S~SK~~~~pG-lRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~ 281 (433)
T PRK06855 204 DLFIICDEIYNNIVYNGKKTVP-LSEVIGDVPGIALKGISKELPWPG-SRCGWIEVYNADKDEVFKKYINSILNAKMIEV 281 (433)
T ss_pred CCEEEEeccccccccCCCCCCC-HHHHcCcCCeEEEecCccccCCCc-ceEEEEEEeCCchhhHHHHHHHHHHHhhcccc
Confidence 9999999999877333421110 0111222 2 37999997 77 688888862 2 22221110
Q ss_pred C-hH-----------------HH-------H---HHHHHHHHcCCCeeEEEeee-eEEEEEEecCcc----cCCCch---
Q 003466 714 D-SK-----------------LW-------D---LELIQQISSHRTVQRVVALG-TLCAIELQAAGC----NAGYGS--- 757 (818)
Q Consensus 714 ~-~~-----------------~~-------~---~~l~~~l~~~~~v~~vrg~G-l~~~iel~~~~~----~~~~~~--- 757 (818)
. .. .+ . +.+.+.|+.++.+.-....| +++-+.+..... ....+.
T Consensus 282 ~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~ 361 (433)
T PRK06855 282 CSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEV 361 (433)
T ss_pred CCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhh
Confidence 0 00 01 0 11233444444332233444 444444432100 000000
Q ss_pred ------------HHHHHHHH-HHHhCCceEeec------CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 758 ------------LYAASLLK-KLREDGVYMRPL------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 758 ------------~~a~~~~~-~l~e~Gvlv~p~------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.....++. .+.++||.+.|+ ++.+|++... .++++|++.+++|.++++++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 362 KEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred HHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHHHH
Confidence 01234554 456889999874 2357887754 57999999999999998753
No 243
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.83 E-value=3.2e-07 Score=101.60 Aligned_cols=165 Identities=14% Similarity=0.150 Sum_probs=107.4
Q ss_pred EEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCccc
Q 003466 622 ALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVIP 697 (818)
Q Consensus 622 AVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~P 697 (818)
.++..| ++-.|.+. +.+-+++|.++|++||+++|.||+..-|.-.+........+-.+.++ +|||.+| .| +-
T Consensus 126 v~l~nP--~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G-lR 201 (332)
T PRK06425 126 IFIVSP--DNPLGNLI-SRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPS-LR 201 (332)
T ss_pred EEEeCC--CCCcCCcc-CHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCch-hh
Confidence 455566 77788766 78899999999999999999999998773222111111111123333 8999999 88 79
Q ss_pred cceeecchHHHhhccCChH----------HH-------------------HHHHHHHHHcCCCeeEE-EeeeeEEEEEEe
Q 003466 698 LAATLATNAVFDSFVGDSK----------LW-------------------DLELIQQISSHRTVQRV-VALGTLCAIELQ 747 (818)
Q Consensus 698 lsAvl~~~~i~~~l~~~~~----------~~-------------------~~~l~~~l~~~~~v~~v-rg~Gl~~~iel~ 747 (818)
+|.+++++++++.+..... .+ ++.+.+.+++++ +..+ ...|.++-+.+.
T Consensus 202 iGy~v~~~~li~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~g~f~~~~~~ 280 (332)
T PRK06425 202 IGYIATDDYNMKISRKITEPWSVCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAMG-FRAAGDPSANFITFMIP 280 (332)
T ss_pred heeeecCHHHHHHHHHcCCCCccCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCceEEEEEcC
Confidence 9999999998876542110 00 011233344443 2222 234555555443
Q ss_pred cCcccCCCchHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 748 AAGCNAGYGSLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 748 ~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+ +..+++.|.++||.+++. .+-+|++.. ++++.++++++|++.+
T Consensus 281 -~----------~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 281 -D----------AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred -C----------HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 2 456888999999999973 146787753 5789999999998764
No 244
>PRK05942 aspartate aminotransferase; Provisional
Probab=98.82 E-value=8.4e-07 Score=100.57 Aligned_cols=219 Identities=10% Similarity=-0.016 Sum_probs=125.9
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-CCC-cEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-WAS-RAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~l~-~v~f~~SGseA~e 475 (818)
.+||+..|. ..+-. ++++.+++.+++..... +....+..+...++++.+....+.+ .-+ .+++++++++|..
T Consensus 36 ~~i~l~~g~---p~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~ 111 (394)
T PRK05942 36 DLIDLGMGN---PDGAA-PQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLT 111 (394)
T ss_pred CeEEcCCCC---CCCCC-CHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHH
Confidence 677887642 22334 66788888877653211 1111233456667777776543321 013 4788888899988
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.++... -..| ..|++.+-+|.+....+ ...|..
T Consensus 112 ~~~~~~-----~~~g----------------d~Vlv~~P~y~~~~~~~-~~~g~~------------------------- 144 (394)
T PRK05942 112 HLALAY-----VNPG----------------DVVLVPSPAYPAHFRGP-LIAGAQ------------------------- 144 (394)
T ss_pred HHHHHh-----CCCC----------------CEEEEcCCCCcchHHHH-HHcCCE-------------------------
Confidence 887754 1222 36888888887643221 111111
Q ss_pred cCcceeecCcchhhhhccccccccc-cCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEc-cccccCC
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITF-CSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIE-PVVHAAG 633 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~-nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvE-PV~~g~g 633 (818)
.+++|-.. +..| .| .+.+++.+. .++.+|++- | ++-.
T Consensus 145 -----~~~v~~~~--------~~~~~~d------------------~~~l~~~~~--------~~~k~i~l~~P--~NPt 183 (394)
T PRK05942 145 -----IYPIILKP--------ENDWLID------------------LSSIPEEVA--------QQAKILYFNYP--SNPT 183 (394)
T ss_pred -----EEEeecCC--------ccCCccC------------------HHHHHHhcc--------ccceEEEEcCC--CCCC
Confidence 01111000 0000 01 134544442 245566655 6 6777
Q ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc----chhcc-cCCCCcEEEeccccc-CCccccceeecchHH
Q 003466 634 GMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE----TTADL-LGCVPDIACYGKLLT-GGVIPLAATLATNAV 707 (818)
Q Consensus 634 G~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~----~a~e~-~gv~PDivtlgKgLg-gGy~PlsAvl~~~~i 707 (818)
|.+. +.+-+++|.++|++||+++|.||++.-|-..|.. ..... .+..-.+.+|||.+| .| +-+|.+++++++
T Consensus 184 G~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~G-lRiG~i~~~~~l 261 (394)
T PRK05942 184 TATA-PREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAG-WRVGFVVGNRHI 261 (394)
T ss_pred CCcC-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChh-hheeeeecCHHH
Confidence 8766 8899999999999999999999998655322321 11110 112223457999886 56 688889999998
Q ss_pred Hhhcc
Q 003466 708 FDSFV 712 (818)
Q Consensus 708 ~~~l~ 712 (818)
++.+.
T Consensus 262 ~~~l~ 266 (394)
T PRK05942 262 IQGLR 266 (394)
T ss_pred HHHHH
Confidence 87664
No 245
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=98.82 E-value=4e-07 Score=101.61 Aligned_cols=289 Identities=15% Similarity=0.121 Sum_probs=159.3
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
.++|+..+ .+.++- .|++++++.+.+....... +..+-..+|-+.|+++++...-+.++++++++++...+++
T Consensus 27 ~~i~l~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~---Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 27 GMVKLDAM--ENPYRL--PAELRAELGERLAEVALNR---YPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CceeCcCC--CCCCCC--CHHHHHHHHHHhhcccccc---CCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHH
Confidence 67777653 234553 5899999998876422111 1112235666777776653211368888777788777777
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
+. ...| ..|++.+-+|.+... .....|..
T Consensus 100 ~~-----~~~g----------------d~vlv~~P~y~~~~~-~~~~~g~~----------------------------- 128 (356)
T PRK04870 100 AC-----AKPG----------------ATVLAPEPGFVMYRM-SAKLAGLE----------------------------- 128 (356)
T ss_pred Hh-----cCCC----------------CEEEECCCCHHHHHH-HHHHcCCE-----------------------------
Confidence 54 1222 367777777765321 11112211
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEc-cccccCCCcccC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIE-PVVHAAGGMHMV 638 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvE-PV~~g~gG~~~~ 638 (818)
.+.+|-.. +. -.| .+.+++.+.. .++.+|++- | +.-.|...
T Consensus 129 -~~~i~~~~--------~~-~~d------------------~~~l~~~~~~-------~~~~~v~l~~p--~NPtG~~~- 170 (356)
T PRK04870 129 -FVGVPLTA--------DF-TLD------------------LPAMLAAIAE-------HRPALVFLAYP--NNPTGNLF- 170 (356)
T ss_pred -EEEecCCC--------CC-CCC------------------HHHHHHHhhc-------CCCCEEEEcCC--CCCCCCCC-
Confidence 11111000 00 001 1456666641 234455544 5 67778877
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCcEEEeccccc-CCccccceeecchHHHhhccCCh-
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPDIACYGKLLT-GGVIPLAATLATNAVFDSFVGDS- 715 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PDivtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~- 715 (818)
+.+-++++.++| ++++|+||++..|.-. .+. ....++-.--+-+||| .+ .| +.+|.+++++++++.+....
T Consensus 171 ~~~~~~~i~~~~---~~~ii~De~y~~~~~~-~~~~~~~~~~~vi~~~S~SK-~~~~G-lRiG~~i~~~~~i~~~~~~~~ 244 (356)
T PRK04870 171 DDADVERIIEAA---PGLVVVDEAYQPFAGD-SWLPRLARFPNLLVMRTVSK-LGLAG-LRLGYLAGHPAWIAELDKVRP 244 (356)
T ss_pred CHHHHHHHHHHC---CCEEEEECCchhhcCc-chHHHHhhCCCEEEEecchh-hhhHH-HhhhhhhCCHHHHHHHHHccC
Confidence 566666666666 7899999999877421 111 1111110011237999 44 35 68888999998877653210
Q ss_pred -----H--------HH------H----------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHH
Q 003466 716 -----K--------LW------D----------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKK 766 (818)
Q Consensus 716 -----~--------~~------~----------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~ 766 (818)
. .+ + +.+.+.++..+.+.-....|.++-+.+. + ...+++.
T Consensus 245 ~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~ 313 (356)
T PRK04870 245 PYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP-D----------AAAVFDG 313 (356)
T ss_pred CCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC-C----------HHHHHHH
Confidence 0 00 0 1123344445443222334444444442 1 3457788
Q ss_pred HHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 767 LREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 767 l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
|.++||.+++. .+.+|+... +.++.++++++|+++
T Consensus 314 l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 314 LKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred HHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 99999999873 257888765 688999999988765
No 246
>PLN02409 serine--glyoxylate aminotransaminase
Probab=98.82 E-value=3.2e-07 Score=104.37 Aligned_cols=287 Identities=14% Similarity=0.025 Sum_probs=162.8
Q ss_pred CHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccC
Q 003466 418 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLG 497 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~ 497 (818)
+++|.+|+.+.... |. .....+...++.++|+++++.+.-+.+++.+||++|++.++...+ +.|
T Consensus 21 ~~~V~~a~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~-----~~G------- 84 (401)
T PLN02409 21 PERVLRAMNRPNED--HR--SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL-----SPG------- 84 (401)
T ss_pred CHHHHHHhcCCCCC--CC--CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC-----CCC-------
Confidence 56666666543311 21 112245667778888888765422468999999999999987541 122
Q ss_pred CCccccccceEEEEEcCCCCCCccccc-cccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccc
Q 003466 498 KDTTEKCIELKVLALKGSYHGDTLGAM-EAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHK 576 (818)
Q Consensus 498 ~~~~~~~~r~~II~~~~sYHG~t~~al-s~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~ 576 (818)
.+|++.+.+|.+....-+ ...|.. ...++.+...
T Consensus 85 ---------d~Vlv~~~~~~~~~~~~~~~~~g~~----------------------------v~~v~~~~~~-------- 119 (401)
T PLN02409 85 ---------DKVVSFRIGQFSLLWIDQMQRLNFD----------------------------VDVVESPWGQ-------- 119 (401)
T ss_pred ---------CEEEEeCCCchhHHHHHHHHHcCCc----------------------------eEEEECCCCC--------
Confidence 378888877765331110 000100 0011111000
Q ss_pred cccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHH--HHhcC
Q 003466 577 DITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKE--CQNRK 654 (818)
Q Consensus 577 ~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreL--c~~~g 654 (818)
..| .+.+++.+.. ....++.+|++-.+ ....|.+.+ ++++.++ |+++|
T Consensus 120 ---~~~------------------~~~l~~~l~~----~~~~~~k~v~~~~~-~~~tG~~~~----~~~i~~l~~~~~~g 169 (401)
T PLN02409 120 ---GAD------------------LDILKSKLRQ----DTNHKIKAVCVVHN-ETSTGVTND----LAGVRKLLDCAQHP 169 (401)
T ss_pred ---CCC------------------HHHHHHHHhh----CcCCCccEEEEEee-cccccccCC----HHHHHHHHhhhccC
Confidence 000 2556666752 00125666666554 556788886 7888888 99999
Q ss_pred CcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCccccceeecchHHHhhccC-------------------
Q 003466 655 IPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGVIPLAATLATNAVFDSFVG------------------- 713 (818)
Q Consensus 655 ilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy~PlsAvl~~~~i~~~l~~------------------- 713 (818)
+++|+|++++ +|.. -...+.+ ..|++ ...|.+++. .-+|.+.++++.++.+..
T Consensus 170 ~~~vvD~v~s-~g~~--~id~~~~--~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
T PLN02409 170 ALLLVDGVSS-IGAL--DFRMDEW--GVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKL 243 (401)
T ss_pred cEEEEEcccc-cCCc--ccccccc--CccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhc
Confidence 9999999995 4321 1112223 35666 467988764 137778888887654321
Q ss_pred C-----hH-------------HHH---------------HHHHHHHHcCCC--eeEE-E-eeeeEEEEEEecCcccCCCc
Q 003466 714 D-----SK-------------LWD---------------LELIQQISSHRT--VQRV-V-ALGTLCAIELQAAGCNAGYG 756 (818)
Q Consensus 714 ~-----~~-------------~~~---------------~~l~~~l~~~~~--v~~v-r-g~Gl~~~iel~~~~~~~~~~ 756 (818)
+ .. .+. +.+.+.++..+. +..- . ..+.+..+.+...
T Consensus 244 g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~------- 316 (401)
T PLN02409 244 GTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEG------- 316 (401)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCC-------
Confidence 0 00 000 112233333321 1110 0 1223333433211
Q ss_pred hHHHHHHHHHHH-hCCceEee-----cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 757 SLYAASLLKKLR-EDGVYMRP-----LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 757 ~~~a~~~~~~l~-e~Gvlv~p-----~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
..+..+.+.|. +.|+.+.. .+..+|+...-.++++|+..++++|+++|.++.
T Consensus 317 -~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 317 -IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred -CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 12345666665 66999985 357899999999999999999999999998764
No 247
>PRK09265 aminotransferase AlaT; Validated
Probab=98.82 E-value=1.1e-06 Score=100.03 Aligned_cols=312 Identities=11% Similarity=0.059 Sum_probs=167.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhcc--CCCCCCcEEEeCChhHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGV--GKGWASRAYFSDNGSTAIEIA 477 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~--~~~~l~~v~f~~SGseA~e~A 477 (818)
..+|+..|.- ..+++...+++.+++.+.+.....+....+..+....+|+.+.... +-. .+.+++++++++++..+
T Consensus 34 ~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~-~~~i~~t~G~~~~l~~~ 111 (404)
T PRK09265 34 KILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVD-VDDIYIGNGVSELIVMA 111 (404)
T ss_pred CeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCC-cccEEEeCChHHHHHHH
Confidence 5677766532 2456543678999988766543222212233345556666654321 111 35789998888988888
Q ss_pred HHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccC
Q 003466 478 LKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYN 557 (818)
Q Consensus 478 LklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~ 557 (818)
++.. -..| ..|++.+.+|.+.... +...|..
T Consensus 112 ~~~~-----~~~g----------------d~Vlv~~p~y~~~~~~-~~~~g~~--------------------------- 142 (404)
T PRK09265 112 MQAL-----LNNG----------------DEVLVPAPDYPLWTAA-VSLSGGK--------------------------- 142 (404)
T ss_pred HHHh-----CCCC----------------CEEEEeCCCCcChHHH-HHHcCCE---------------------------
Confidence 8755 1122 3688877777653321 1111111
Q ss_pred cceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEE-EEEccccccCCCcc
Q 003466 558 SKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGA-LIIEPVVHAAGGMH 636 (818)
Q Consensus 558 ~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV~~g~gG~~ 636 (818)
.+.+|. |.+..|. .+ .+.+++.+. .++.+ +++-| ++-.|.+
T Consensus 143 ---~v~~~~---------------~~~~~~~--~d--------~~~l~~~~~--------~~~~~v~l~~P--~NPtG~~ 184 (404)
T PRK09265 143 ---PVHYLC---------------DEEAGWF--PD--------LDDIRSKIT--------PRTKAIVIINP--NNPTGAV 184 (404)
T ss_pred ---EEEEec---------------ccccCCC--CC--------HHHHHHhcc--------ccceEEEEECC--CCCCCcC
Confidence 001110 0000000 00 144555443 23444 44555 6777876
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCc--E---EEeccccc-CCccccceeec--chH--
Q 003466 637 MVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPD--I---ACYGKLLT-GGVIPLAATLA--TNA-- 706 (818)
Q Consensus 637 ~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD--i---vtlgKgLg-gGy~PlsAvl~--~~~-- 706 (818)
. +.+-+++|.++|++||+++|.||++..|-..+.... ......++ + -+|||.++ .| +-+|.+++ +++
T Consensus 185 ~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~vi~~~S~SK~~~~pG-lRiG~~v~~~~~~~~ 261 (404)
T PRK09265 185 Y-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI-SIASLAPDLLCVTFNGLSKAYRVAG-FRVGWMVLSGPKKHA 261 (404)
T ss_pred C-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC-CHHHcCCCceEEEEecchhhccCcc-cceEEEEEeCchHHH
Confidence 6 778899999999999999999999987632232110 00112233 2 25899995 56 78888885 332
Q ss_pred --HHhhcc---C----C-h--H-----HHH-------------------HHHHHHHHcCCCeeEEEee-eeEEEEEEecC
Q 003466 707 --VFDSFV---G----D-S--K-----LWD-------------------LELIQQISSHRTVQRVVAL-GTLCAIELQAA 749 (818)
Q Consensus 707 --i~~~l~---~----~-~--~-----~~~-------------------~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~ 749 (818)
+.+.+. . . . . .+. +.+.+.++.++.+.-+... |+++-+.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~ 341 (404)
T PRK09265 262 KGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPK 341 (404)
T ss_pred HHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEeccc
Confidence 322211 0 0 0 0 000 0122334444433222233 45554555422
Q ss_pred cccCCCchHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 750 GCNAGYGSLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 750 ~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
... .. .....+.+.|.++||++.|+ .+.+|+.. ..+++++++.+++|.++++..
T Consensus 342 ~~~-~~--~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 342 VYP-IH--DDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred ccC-CC--CHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHHh
Confidence 000 00 12334667788999999873 25677776 367899999999999888654
No 248
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=98.81 E-value=9.5e-07 Score=98.81 Aligned_cols=289 Identities=15% Similarity=0.157 Sum_probs=176.1
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
..+|+.++ -+.+|-. |++.+++.+.++.+..+ ..+...+|.+.+++..+....+.|+.+|+..|..+..++
T Consensus 23 ~~i~LssN--enP~gp~--~~~~~~~~~~~~~~~rY-----Pd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~ 93 (356)
T COG0079 23 GIIKLSSN--ENPYGPP--PKVIEAIRAALDKLNRY-----PDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVR 93 (356)
T ss_pred cceeecCC--CCCCCCC--HHHHHHHHHHHHhhccC-----CCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHH
Confidence 46777663 4456643 89999999887744322 233467888888887762113578888888888887777
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
+. ...| .+|+....+|.-....+...+ .+ .
T Consensus 94 ~~-----~~~g----------------d~vl~~~Ptf~~Y~~~a~~~g-~~----------------------------~ 123 (356)
T COG0079 94 AF-----VEPG----------------DTVLIPEPTFSMYEIAAQLAG-AE----------------------------V 123 (356)
T ss_pred Hh-----hcCC----------------CEEEEcCCChHHHHHHHHhcC-Ce----------------------------E
Confidence 65 1111 478888777754332222211 11 0
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcE-EEEEEccccccCCCcccC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCI-GALIIEPVVHAAGGMHMV 638 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~i-AAVIvEPV~~g~gG~~~~ 638 (818)
+.++..+ |. .| .+.+...+. ++. ..+|..| .+-.|...
T Consensus 124 ~~v~~~~-~~-----------~d------------------~~~~~~~~~--------~~~~lv~i~nP--NNPTG~~~- 162 (356)
T COG0079 124 VKVPLKE-FR-----------LD------------------LDAILAAIR--------DKTKLVFLCNP--NNPTGTLL- 162 (356)
T ss_pred EEecccc-cc-----------cC------------------HHHHHHhhh--------cCCCEEEEeCC--CCCCCCCC-
Confidence 1111111 10 01 122323332 123 3666678 46677766
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCc-EE---Eeccccc-CCccccceeecchHHHhhccC
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPD-IA---CYGKLLT-GGVIPLAATLATNAVFDSFVG 713 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD-iv---tlgKgLg-gGy~PlsAvl~~~~i~~~l~~ 713 (818)
+.+-++++.+.|.+ ++++|+||+..-|+. --...... .++ ++ ||||+.| .| +-+|.+++++++++.+..
T Consensus 163 ~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~---~~~~~l~~-~~~nlivlRTfSKa~gLAG-lRlGy~ia~~~~i~~l~~ 236 (356)
T COG0079 163 PREELRALLEALPE-GGLVVIDEAYIEFSP---ESSLELLK-YPPNLIVLRTFSKAFGLAG-LRVGYAIANPELIAALNK 236 (356)
T ss_pred CHHHHHHHHHhCCC-CcEEEEeCchhhcCC---chhhhhcc-CCCCEEEEEecHHhhhcch-hceeeccCCHHHHHHHHH
Confidence 67777888888888 999999999988855 11222222 344 44 8999777 45 688889999999987753
Q ss_pred ChH------------------------------HHHHHHHHHHHcCCCeeEEEe-eeeEEEEEEecCcccCCCchHHHHH
Q 003466 714 DSK------------------------------LWDLELIQQISSHRTVQRVVA-LGTLCAIELQAAGCNAGYGSLYAAS 762 (818)
Q Consensus 714 ~~~------------------------------~~~~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~ 762 (818)
-.. ..++++.+.++.++ +..|.. .+-++-+.+... . +..
T Consensus 237 vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~--------~-~~~ 306 (356)
T COG0079 237 VRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDA--------E-AAA 306 (356)
T ss_pred hcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCc--------c-HHH
Confidence 211 11123455566665 332322 244444444321 4 567
Q ss_pred HHHHHHhCCceEeecC------CEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 763 LLKKLREDGVYMRPLG------NVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 763 ~~~~l~e~Gvlv~p~g------~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
+.+.|+++||+++... +.+|++.. |++|-++++++|.++++.
T Consensus 307 l~~~L~~~giivR~~~~~~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 307 LAEALLKKGILVRDCSSVGLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHCCEEEEeCCCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 8999999999999753 37888764 577779999999888754
No 249
>PRK07337 aminotransferase; Validated
Probab=98.80 E-value=1.5e-06 Score=98.21 Aligned_cols=174 Identities=17% Similarity=0.200 Sum_probs=106.1
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCcc
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVI 696 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~ 696 (818)
+.++.-| +.-.|... +.+-+++|.++|++||+++|+||+..+|.-.+.... .....++++ ++||.++ .| +
T Consensus 166 ~v~l~~p--~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~vi~~~S~SK~~~~~G-~ 239 (388)
T PRK07337 166 GVLLASP--SNPTGTSI-APDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVS--ALSLGDDVITINSFSKYFNMTG-W 239 (388)
T ss_pred EEEEECC--CCCCCcCc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcC--hhhccCCEEEEEechhhcCCch-h
Confidence 3444445 67777666 788899999999999999999999987754443111 112234554 6899996 56 6
Q ss_pred ccceeecchHHHhhccCCh--------H--------H--------HH----------HHHHHHHHcCCCeeEEE-eeeeE
Q 003466 697 PLAATLATNAVFDSFVGDS--------K--------L--------WD----------LELIQQISSHRTVQRVV-ALGTL 741 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~~~--------~--------~--------~~----------~~l~~~l~~~~~v~~vr-g~Gl~ 741 (818)
-+|.+++++++++.+.... . . +. +.+.+.++.++....+. ..|.+
T Consensus 240 RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f 319 (388)
T PRK07337 240 RLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFY 319 (388)
T ss_pred heeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEE
Confidence 7888999988876553211 0 0 00 11223344443321122 34566
Q ss_pred EEEEEecCcccCCCchHHHHHHHHHH-HhCCceEeec--------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 742 CAIELQAAGCNAGYGSLYAASLLKKL-REDGVYMRPL--------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 742 ~~iel~~~~~~~~~~~~~a~~~~~~l-~e~Gvlv~p~--------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+-+++..... ++......++..+ .++||.+.|+ .+.+|++... +++++.+.+++|.+++
T Consensus 320 ~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 320 VYADCRGVAH---PAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred EEEecccccC---CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 6666643100 0001245677665 5789999862 2467777763 6888999998887754
No 250
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=98.80 E-value=1.8e-07 Score=106.35 Aligned_cols=171 Identities=15% Similarity=0.095 Sum_probs=106.2
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
...++...+|+++|+++.|. +.++.++||.+|+..++.... +.| ..||+....|++
T Consensus 60 r~~~p~~~~le~~lA~l~g~---~~~i~~ssG~~Ai~~~l~all-----~~G----------------D~Vi~~~~~y~~ 115 (398)
T PRK08249 60 RNTNPTVQAFEEKVRILEGA---EAATAFSTGMAAISNTLYTFL-----KPG----------------DRVVSIKDTYGG 115 (398)
T ss_pred CCCChHHHHHHHHHHHHhCC---CeEEEeCChHHHHHHHHHHhc-----CCC----------------CEEEEcCCchHH
Confidence 34578889999999999874 578888999999998887541 222 268888888765
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
.. ..+... .+ ..|.. ...++ ..|
T Consensus 116 ~~-~~~~~~-~~------------~~Gi~-------------v~~vd--------------~~d---------------- 138 (398)
T PRK08249 116 TN-KIFTEF-LP------------RMGVD-------------VTLCE--------------TGD---------------- 138 (398)
T ss_pred HH-HHHHHH-Hh------------hCCeE-------------EEEcC--------------CCC----------------
Confidence 31 111000 00 00000 00000 011
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL 678 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~ 678 (818)
.+.+++.|. .++.+|++|.. .+..|.+.+ +++|.++|++||+++|+||++..+ -.+. ..
T Consensus 139 --~e~l~~~i~--------~~tklV~ie~p-~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~-~~~~-----~l 197 (398)
T PRK08249 139 --HEQIEAEIA--------KGCDLLYLETP-TNPTLKIVD----IERLAAAAKKVGALVVVDNTFATP-INQN-----PL 197 (398)
T ss_pred --HHHHHHhcC--------CCCeEEEEECC-CCCCCccCC----HHHHHHHHHHcCCEEEEECCcCcc-ccCC-----ch
Confidence 144555553 24678999875 677787775 899999999999999999998632 1111 11
Q ss_pred CCCCcEE--EecccccCCcccc-ceeecchHHHhhc
Q 003466 679 GCVPDIA--CYGKLLTGGVIPL-AATLATNAVFDSF 711 (818)
Q Consensus 679 gv~PDiv--tlgKgLggGy~Pl-sAvl~~~~i~~~l 711 (818)
....|++ .++|.++|.-..+ |++++++++++.+
T Consensus 198 ~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l 233 (398)
T PRK08249 198 ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQV 233 (398)
T ss_pred hhCCCEEeccCceecCCCCCceEEEEECCHHHHHHH
Confidence 2246766 5789998621223 5566778777654
No 251
>PRK04311 selenocysteine synthase; Provisional
Probab=98.80 E-value=2.4e-06 Score=98.78 Aligned_cols=279 Identities=17% Similarity=0.154 Sum_probs=158.6
Q ss_pred CHHHHHHHHHhhhhccccc--C-CCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccccccc
Q 003466 418 QIELARDMGYTAARFGHVM--F-PENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVD 494 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~--~-~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~ 494 (818)
.+++.+|+.+.+..+.... . .+...+...++++.|++++|. +.+++++||+.|+..++... ..|
T Consensus 99 ~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga---e~a~vv~sgtaAl~l~l~~l------~~G---- 165 (464)
T PRK04311 99 SEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA---EDALVVNNNAAAVLLALNAL------AAG---- 165 (464)
T ss_pred CHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHHh------CCC----
Confidence 6889999999887654211 1 112234567889999999884 57889999999998888543 112
Q ss_pred ccCCCccccccceEEEEEcCC-CC-CCccc---cccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhh
Q 003466 495 FLGKDTTEKCIELKVLALKGS-YH-GDTLG---AMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLY 569 (818)
Q Consensus 495 ~~~~~~~~~~~r~~II~~~~s-YH-G~t~~---als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~ 569 (818)
..||+.++. || |.+.. .+...|.. .+.++
T Consensus 166 ------------deVIvs~~e~~~~ggs~~i~~~~~~~G~~------------------------------l~~v~---- 199 (464)
T PRK04311 166 ------------KEVIVSRGELVEIGGAFRIPDVMRQAGAR------------------------------LVEVG---- 199 (464)
T ss_pred ------------CEEEEcchhhhhcCcchhhHHHHHHCCcE------------------------------EEEEC----
Confidence 357776653 43 22110 01111100 00000
Q ss_pred hhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEcccccc--CCC--cccCCHHHHHH
Q 003466 570 SKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHA--AGG--MHMVDPLFQRI 645 (818)
Q Consensus 570 ~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g--~gG--~~~~p~~fl~~ 645 (818)
+++. .. .+.+++.|. +++++|+++-. .+ ..| ..++ +++
T Consensus 200 ----------~~~~----------t~-----~~dle~aI~--------~~TklV~~vh~-sN~~i~G~~~~~d----l~e 241 (464)
T PRK04311 200 ----------TTNR----------TH-----LRDYEQAIN--------ENTALLLKVHT-SNYRIEGFTKEVS----LAE 241 (464)
T ss_pred ----------CCCC----------CC-----HHHHHHhcC--------ccCeEEEEEcC-CCccccccCCcCC----HHH
Confidence 1110 00 144566663 34677777764 32 123 2333 999
Q ss_pred HHHHHHhcCCcEEEeecccCcccCC---ccc------hhcccCCCCcEEEec--ccccCCccccceeecchHHHhhccCC
Q 003466 646 LVKECQNRKIPVIFDEVFTGFWRLG---VET------TADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSFVGD 714 (818)
Q Consensus 646 LreLc~~~gilLI~DEV~TGfGRtG---~~~------a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l~~~ 714 (818)
|.++|++||+++|+|.. .|-.| .++ ..+....-.|++++| |.|||.. .|++++++++++.+...
T Consensus 242 I~~lak~~gi~vivD~g---sG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~--~G~i~g~~~li~~l~~~ 316 (464)
T PRK04311 242 LAALGKEHGLPVVYDLG---SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ--AGIIVGKKELIARLKKH 316 (464)
T ss_pred HHHHHHHcCCeEEEECC---CcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc--eEEEEEcHHHHHHHhhc
Confidence 99999999999999984 33333 221 111122347999998 9998752 66688899888766531
Q ss_pred hH--------------------H------H-------------------HHHHHHHHHcCC--Ce-eEEE------eeee
Q 003466 715 SK--------------------L------W-------------------DLELIQQISSHR--TV-QRVV------ALGT 740 (818)
Q Consensus 715 ~~--------------------~------~-------------------~~~l~~~l~~~~--~v-~~vr------g~Gl 740 (818)
.. + + .+.+.+.|+.++ .+ ..+. |-|.
T Consensus 317 ~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs 396 (464)
T PRK04311 317 PLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGS 396 (464)
T ss_pred hhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCC
Confidence 11 0 0 011223333332 11 1111 2222
Q ss_pred E-------EEEEEecCcccCCCchHHHHHHHHHHHh--CCceEeecCCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 741 L-------CAIELQAAGCNAGYGSLYAASLLKKLRE--DGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 741 ~-------~~iel~~~~~~~~~~~~~a~~~~~~l~e--~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+ +++.+... ...+..+.++|++ -.|+.+...+.+.+-+ -++.++|++.+++++.+.+.
T Consensus 397 ~p~~~~~~~~v~~~~~-------~~~~~~l~~~lr~~~~~i~~r~~~~~~~ld~-r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 397 LPVDRLPSAAVTLTPK-------DRSLEALAARLRLLPPPVIGRIEDGRLLLDL-RTLEEEDEERLAAALLEALN 463 (464)
T ss_pred CcCCCCCeEEEEEeCC-------CCCHHHHHHHHhcCCCCEEEEEECCEEEEEe-CcCCHHHHHHHHHHHHHHhh
Confidence 2 22222211 1235677788875 5688888778887765 45678999999999988753
No 252
>PRK08354 putative aminotransferase; Provisional
Probab=98.80 E-value=8.8e-07 Score=97.19 Aligned_cols=270 Identities=15% Similarity=0.104 Sum_probs=156.2
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
.+||+..+. +.+ . +|.+.+|+.+.++..... +....|.+.+++..+ +.++.++++++|...++.
T Consensus 9 ~~i~l~~~~--np~--~-p~~~~~a~~~~~~~~~~y-------p~~~~l~~~ia~~~~----~~I~vt~G~~~al~~~~~ 72 (311)
T PRK08354 9 GLIDFSASV--NPY--P-PEWLDEMFERAKEISGRY-------TYYEWLEEEFSKLFG----EPIVITAGITEALYLIGI 72 (311)
T ss_pred ceeEecCCC--CCC--C-CHHHHHHHHHHHHHhhcC-------CChHHHHHHHHHHHC----CCEEECCCHHHHHHHHHH
Confidence 688988642 344 4 789999998876653221 123567788888776 478999999999887664
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
+. . .| ..|++.+-+|.+....+. ..|...
T Consensus 73 ~~-----~-~g----------------d~vlv~~P~y~~~~~~~~-~~g~~~---------------------------- 101 (311)
T PRK08354 73 LA-----L-RD----------------RKVIIPRHTYGEYERVAR-FFAARI---------------------------- 101 (311)
T ss_pred hh-----C-CC----------------CeEEEeCCCcHHHHHHHH-HcCCEE----------------------------
Confidence 33 1 22 367777777766432211 111110
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
+..| .| .+.+++.+. ..+ ..++.-| ++-.|... +
T Consensus 102 --~~~~---------------~d------------------~~~l~~~~~-------~~~-~vi~~~P--~NPTG~~~-~ 135 (311)
T PRK08354 102 --IKGP---------------ND------------------PEKLEELVE-------RNS-VVFFCNP--NNPDGKFY-N 135 (311)
T ss_pred --eecC---------------CC------------------HHHHHHhhc-------CCC-EEEEecC--CCCCCCcc-C
Confidence 0000 01 134444442 122 4777788 67778766 7
Q ss_pred HHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCc-E---EEeccccc-CCccccceeecchHHHhhccCC
Q 003466 640 PLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPD-I---ACYGKLLT-GGVIPLAATLATNAVFDSFVGD 714 (818)
Q Consensus 640 ~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD-i---vtlgKgLg-gGy~PlsAvl~~~~i~~~l~~~ 714 (818)
.+-+++|.++|++||+++|.||++..|..-+.. ..++ + -+|||.++ .| +.+|.+++-.+.+......
T Consensus 136 ~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~-------~~~~~vi~~~S~SK~~~l~G-lRiG~~v~~~~~l~~~~~~ 207 (311)
T PRK08354 136 FKELKPLLDAVEDRNALLILDEAFIDFVKKPES-------PEGENIIKLRTFTKSYGLPG-IRVGYVKGFEEAFRSVRMP 207 (311)
T ss_pred HHHHHHHHHHhhhcCcEEEEeCcchhccccccc-------cCCCcEEEEeccHhhcCCcc-ceeeeeeehHHHHHHcCCC
Confidence 899999999999999999999999887322211 1122 2 37999998 77 6888888733333222111
Q ss_pred ---hH--------HHHH---H-------HHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCce
Q 003466 715 ---SK--------LWDL---E-------LIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVY 773 (818)
Q Consensus 715 ---~~--------~~~~---~-------l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvl 773 (818)
.. .+.. . +.+..+...........|.++-+++. + +..+++.|.++||+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~----------~~~~~~~l~~~gv~ 276 (311)
T PRK08354 208 WSIGSTGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKALYVKSDANFFIKDVG-D----------AEKFVEFLKRNGIL 276 (311)
T ss_pred ccCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEECC-C----------HHHHHHHHHHCCeE
Confidence 00 1100 0 11111111111112234444434432 1 34678889999999
Q ss_pred EeecC-----CEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 774 MRPLG-----NVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 774 v~p~g-----~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
++++. +.+|+... +.++.+++++++++.
T Consensus 277 v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 277 VRDCTSFGLPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred EEecccCCCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 99842 56777664 355667777666553
No 253
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=98.79 E-value=4.4e-07 Score=101.85 Aligned_cols=284 Identities=15% Similarity=0.086 Sum_probs=173.7
Q ss_pred cCCCCCCHHHHHHHHHhhhhccccc---CCCC---CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHh
Q 003466 412 GPDATLQIELARDMGYTAARFGHVM---FPEN---VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKF 485 (818)
Q Consensus 412 ~lGh~~hp~V~eAi~~q~~~~~~~~---~~~~---~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~ 485 (818)
..|.. .+.|.+++.+.+..+.... .... ..+...+..+.|+++++.+.-+.++|++++++|++.++.......
T Consensus 7 ~~~~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~ 85 (371)
T PF00266_consen 7 GTGPM-PKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPL 85 (371)
T ss_dssp SS-B--BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHG
T ss_pred CccCC-CHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccc
Confidence 35666 8899999999877643211 1111 134556777888888875421579999999999999998772111
Q ss_pred hhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCc
Q 003466 486 SFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLP 565 (818)
Q Consensus 486 t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P 565 (818)
....+|++....|++.......+.. + .|. .+..++.+
T Consensus 86 ------------------~~g~~vl~~~~~~~s~~~~~~~~~~----~----------~g~-----------~v~~i~~~ 122 (371)
T PF00266_consen 86 ------------------KPGDEVLVTSNEHPSNRYPWEEIAK----R----------KGA-----------EVRVIPAD 122 (371)
T ss_dssp ------------------TTTCEEEEEESSHHHHHHHHHHHHH----H----------TTE-----------EEEEEEEG
T ss_pred ------------------ccccccccccccccccccccccccc----c----------chh-----------hhcccccc
Confidence 1234788988888875411111110 0 000 00011111
Q ss_pred chhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHH
Q 003466 566 EWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRI 645 (818)
Q Consensus 566 ~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~ 645 (818)
.. .. .+ .+.+++.|. .++..|++--+ ....|.+.| +++
T Consensus 123 ~~-------------~~--------~~--------~~~~~~~l~--------~~~~lv~~~~~-~~~tG~~~p----i~~ 160 (371)
T PF00266_consen 123 PG-------------GS--------LD--------LEDLEEALN--------PDTRLVSISHV-ENSTGVRNP----IEE 160 (371)
T ss_dssp TT-------------SS--------CS--------HHHHHHHHH--------TTESEEEEESB-ETTTTBBSS----HHH
T ss_pred cc-------------ch--------hh--------hhhhhhhhc--------cccceEEeecc-cccccEEee----ece
Confidence 00 00 00 255666664 46777877776 777899887 999
Q ss_pred HHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEE--ecccccCCccccceeecchHHHhhccCC----h----
Q 003466 646 LVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIAC--YGKLLTGGVIPLAATLATNAVFDSFVGD----S---- 715 (818)
Q Consensus 646 LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgKgLggGy~PlsAvl~~~~i~~~l~~~----~---- 715 (818)
|.++|+++|+++++|=+| ++|..- .-.+. ..+|+++ .-| |+|+ --+|.+..+++..+.+.+. .
T Consensus 161 I~~~~~~~~~~~~vD~~~-~~g~~~--id~~~--~~~D~~~~s~~K-l~gp-~G~g~l~v~~~~~~~~~p~~~~~~~~~~ 233 (371)
T PF00266_consen 161 IAKLAHEYGALLVVDAAQ-SAGCVP--IDLDE--LGADFLVFSSHK-LGGP-PGLGFLYVRPEAIERLRPAKPGGGYLDF 233 (371)
T ss_dssp HHHHHHHTTSEEEEE-TT-TTTTSS----TTT--TTESEEEEESTS-TTSS-STEEEEEEEHHHHHHHHTSSSSSSTTTH
T ss_pred ehhhhhccCCceeEechh-cccccc--ccccc--cccceeeecccc-cCCC-Cchhhheehhhhhhcccccccccccccc
Confidence 999999999999999998 454331 22233 3468875 458 8876 3478888899777655210 0
Q ss_pred -------------------H-------------HH---------------HHHHHHHHHcCCCeeE-----EEeeeeEEE
Q 003466 716 -------------------K-------------LW---------------DLELIQQISSHRTVQR-----VVALGTLCA 743 (818)
Q Consensus 716 -------------------~-------------~~---------------~~~l~~~l~~~~~v~~-----vrg~Gl~~~ 743 (818)
. .+ .+.+.+.+.+.+.+.- -...+.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 313 (371)
T PF00266_consen 234 PSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVS 313 (371)
T ss_dssp HHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEE
T ss_pred ccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEE
Confidence 0 01 1123445555665321 123466777
Q ss_pred EEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------------CCEEEEECCCCChHHHHHHH
Q 003466 744 IELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------------GNVIYLMCGPCSSPEVCSQL 797 (818)
Q Consensus 744 iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------------g~~ir~~ppl~~t~edId~~ 797 (818)
+.+... .+..+.+.|.++||.++.+ +..+|+++....|++|||++
T Consensus 314 ~~~~~~---------~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 314 FNLPGS---------DADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEETTS---------SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred EeecCC---------CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 777332 2467888899899999872 26999999999999999975
No 254
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.79 E-value=4.6e-06 Score=95.18 Aligned_cols=296 Identities=13% Similarity=0.031 Sum_probs=164.0
Q ss_pred CHHHHHHHHHhhhhc--ccccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhccccccc
Q 003466 418 QIELARDMGYTAARF--GHVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVD 494 (818)
Q Consensus 418 hp~V~eAi~~q~~~~--~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~ 494 (818)
.|.+.+|+.+.++.. ..+....+..+....+++.+....+.+ .-+.+++++++++|...+++.. ...|
T Consensus 51 p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l-----~~~g---- 121 (409)
T PLN00143 51 TNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVL-----ARPE---- 121 (409)
T ss_pred CHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHH-----cCCC----
Confidence 677889888877642 222122344566677777776543211 1257999999999999988865 1222
Q ss_pred ccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecC-c-chhhhhc
Q 003466 495 FLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSL-P-EWLYSKI 572 (818)
Q Consensus 495 ~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~-P-~~~~~~~ 572 (818)
..|+..+-+|.+....+. ..|... ..+++ + +.+.
T Consensus 122 ------------d~v~v~~P~y~~~~~~~~-~~g~~~----------------------------~~~~~~~~~~~~--- 157 (409)
T PLN00143 122 ------------ANILLPRPGFPDVETYAI-FHHLEI----------------------------RHFDLLPEKGWE--- 157 (409)
T ss_pred ------------CEEEEcCCCCcCHHHHHH-HcCCEE----------------------------EEEeccCCCCCc---
Confidence 368888888876432211 111110 00000 0 0000
Q ss_pred cccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHh
Q 003466 573 VEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQN 652 (818)
Q Consensus 573 ~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~ 652 (818)
-| .+.+++.+. ....+.+++-| ++-.|.+. +.+-+++|.++|++
T Consensus 158 --------~d------------------~~~l~~~~~-------~~~~~~~~~nP--~NPTG~~~-s~~~~~~l~~~a~~ 201 (409)
T PLN00143 158 --------VD------------------LDAVEAIAD-------ENTIAMVIINP--GNPCGSVY-SYEHLNKIAETARK 201 (409)
T ss_pred --------CC------------------HHHHHHhcc-------cCCEEEEEECC--CCCCCCcc-CHHHHHHHHHHHHH
Confidence 01 145555543 23456777778 67778777 78899999999999
Q ss_pred cCCcEEEeecccCcccCCccc-hhcccCCCCcE---EEecccc-cCCccccceeecc-h-HH------Hhhcc------C
Q 003466 653 RKIPVIFDEVFTGFWRLGVET-TADLLGCVPDI---ACYGKLL-TGGVIPLAATLAT-N-AV------FDSFV------G 713 (818)
Q Consensus 653 ~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PDi---vtlgKgL-ggGy~PlsAvl~~-~-~i------~~~l~------~ 713 (818)
||+++|.||++..|-..|..+ ....+.-.+.+ -+|||.. ..| +-+|.++++ + .+ ++.+. .
T Consensus 202 ~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG-lRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 280 (409)
T PLN00143 202 LGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPG-WGLGWLVTCDPSGLLQICEIADSIKKALNPAP 280 (409)
T ss_pred cCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCc-cceEEEEeeCchhhhhhHHHHHHHHHHHhccC
Confidence 999999999998763333321 11112111122 3799994 456 789988883 2 22 22111 0
Q ss_pred C-hH--------HHH-------H-----------HHHHHHHcCCCeeE-EEe-eeeEEEEEEecCcccCCCchHHHHHHH
Q 003466 714 D-SK--------LWD-------L-----------ELIQQISSHRTVQR-VVA-LGTLCAIELQAAGCNAGYGSLYAASLL 764 (818)
Q Consensus 714 ~-~~--------~~~-------~-----------~l~~~l~~~~~v~~-vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~ 764 (818)
. .. .+. + .+.+.+.+++.... ... -|.++-+.+.... . .+......++
T Consensus 281 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~-~--~~~~~~~~~~ 357 (409)
T PLN00143 281 FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLL-L--EDIEDDMEFC 357 (409)
T ss_pred CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhh-c--CCCCCHHHHH
Confidence 0 00 111 0 11222333332211 122 2555555553210 0 0000133454
Q ss_pred -HHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 765 -KKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 765 -~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
+.+.++||++.|+ .+.+|+... .+++++++.+++|.+.++..
T Consensus 358 ~~ll~~~gV~v~pg~~f~~~~~iRi~~~--~~~~~l~~al~rl~~~l~~~ 405 (409)
T PLN00143 358 LKLAKEESLIILPGVTVGLKNWLRITFA--VEQSSLEDGLGRLKSFCGRH 405 (409)
T ss_pred HHHHHhCCEEEeCccccCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHHh
Confidence 4457899999984 256777765 45899999999999887653
No 255
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=98.79 E-value=2.4e-06 Score=96.99 Aligned_cols=178 Identities=12% Similarity=0.115 Sum_probs=105.4
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCc--E---EEeccccc-CC
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPD--I---ACYGKLLT-GG 694 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD--i---vtlgKgLg-gG 694 (818)
.+|++.-- ++-.|... +.+-+++|.++|+++|+++|+||++..|-..|..+. ......|+ + -+|||..+ .|
T Consensus 170 ~~v~~~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~G 246 (401)
T TIGR01264 170 AALIVNNP-SNPCGSVF-SRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFE-PLASLSSTVPILSCGGLAKRWLVPG 246 (401)
T ss_pred eEEEEcCC-CCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccc-cHHHcCCCCcEEEEccCcccCCCcc
Confidence 45555432 67777765 788999999999999999999999988744443211 11122232 3 37999843 55
Q ss_pred ccccceeecch------HHHhhccC------C-hH--------HHH------------------HHHHHHHHcCCCeeEE
Q 003466 695 VIPLAATLATN------AVFDSFVG------D-SK--------LWD------------------LELIQQISSHRTVQRV 735 (818)
Q Consensus 695 y~PlsAvl~~~------~i~~~l~~------~-~~--------~~~------------------~~l~~~l~~~~~v~~v 735 (818)
+-+|.+++++ ++++.+.. . .. .+. +.+.+.|+.++.+.-+
T Consensus 247 -lRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~ 325 (401)
T TIGR01264 247 -WRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPV 325 (401)
T ss_pred -ceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 6888888763 34332210 0 00 111 1123344555433222
Q ss_pred -EeeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 736 -VALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 736 -rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
-..|.++-+.+.... .++......++..|+ ++||++.|+ .+.+|++.. ..++++++.+++|.+.+++
T Consensus 326 ~p~~g~f~~~~~~~~~---~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 326 MPSGAMYMMVGIEMEH---FPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLT--VPVVMMEEACSRIQEFCER 399 (401)
T ss_pred CCCeeeEEEEEecccc---cCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEc--CCHHHHHHHHHHHHHHHhc
Confidence 234666666654210 000012356777776 789999873 266777765 4588999999999888754
No 256
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=98.78 E-value=2.3e-07 Score=105.10 Aligned_cols=169 Identities=15% Similarity=0.119 Sum_probs=103.2
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++++++.+. +.++.++||++|+..++...+ ..| ..||+...+|++
T Consensus 50 ~~np~~~~lE~~lA~l~g~---~~~l~~~sG~~Ai~~~l~~ll-----~~G----------------D~Vlv~~~~y~~- 104 (385)
T PRK08574 50 EENPTLRPLEEALAKLEGG---VDALAFNSGMAAISTLFFSLL-----KAG----------------DRVVLPMEAYGT- 104 (385)
T ss_pred CCCccHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHHh-----CCC----------------CEEEEcCCCchh-
Confidence 4467788999999999874 577888999999999987551 122 256766666655
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
+...+... .. . +. . + .+-+. +
T Consensus 105 ~~~~~~~~--~~--~----------g~----~----------v----------------~~~~~--------d------- 125 (385)
T PRK08574 105 TLRLLKSL--EK--F----------GV----K----------V----------------VLAYP--------S------- 125 (385)
T ss_pred HHHHHHHh--hc--c----------Cc----E----------E----------------EEECC--------C-------
Confidence 32222110 00 0 00 0 0 00000 0
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. +.++.+|++|.. ++..|.+.+ +++|.++|++||+++|+||+++ .|-..+.. .+|
T Consensus 126 -~~~l~~~i~-------~~~tklV~ie~p-~NPtG~v~d----l~~I~~la~~~gi~livD~t~a-~~~~~~~l---~~G 188 (385)
T PRK08574 126 -TEDIIEAIK-------EGRTKLVFIETM-TNPTLKVID----VPEVAKAAKELGAILVVDNTFA-TPLLYRPL---RHG 188 (385)
T ss_pred -HHHHHHhcC-------ccCceEEEEECC-CCCCCEecC----HHHHHHHHHHcCCEEEEECCCC-ccccCChh---hhC
Confidence 144555553 225778999986 777787775 8899999999999999999993 22121111 234
Q ss_pred CCCcEE--EecccccC-Cccccceeec-chHHHhhc
Q 003466 680 CVPDIA--CYGKLLTG-GVIPLAATLA-TNAVFDSF 711 (818)
Q Consensus 680 v~PDiv--tlgKgLgg-Gy~PlsAvl~-~~~i~~~l 711 (818)
.|++ .++|.++| |-.-.|++++ ++++++.+
T Consensus 189 --aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~ 222 (385)
T PRK08574 189 --ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEEL 222 (385)
T ss_pred --CcEEEeeCceeecCCCCceeEEEEECcHHHHHHH
Confidence 4766 68899976 3112343444 56666543
No 257
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.77 E-value=2.7e-07 Score=105.75 Aligned_cols=162 Identities=13% Similarity=0.115 Sum_probs=105.3
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.+++++||++|+..++.... +.| ..||+....|+|.
T Consensus 55 ~~~pt~~~Le~~lA~l~g~---~~~l~~ssG~~Ai~~al~al~-----~~G----------------d~Vl~~~~~Y~~t 110 (425)
T PRK06084 55 IMNPTNDVLEQRVAALEGG---VGALAVASGMAAITYAIQTIA-----EAG----------------DNIVSVAKLYGGT 110 (425)
T ss_pred CCCchHHHHHHHHHHHhCC---CceeEehhHHHHHHHHHHHHh-----CCC----------------CEEEEeCCCcchH
Confidence 4467788999999998873 577888999999999998652 222 2688888889873
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
...+... .+ + .+. . + ..+ ..+|
T Consensus 111 -~~~~~~~-l~--~----------~gi----~-v------~~~----------------d~~d----------------- 132 (425)
T PRK06084 111 -YNLLAHT-LP--R----------IGI----E-T------RFA----------------AHDD----------------- 132 (425)
T ss_pred -HHHHHHh-cc--c----------cee----E-E------EEE----------------CCCC-----------------
Confidence 2322210 00 0 000 0 0 000 0112
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .++.+|++|.. ++..|.+.+ +++|.++|++||+++|+||++. .+... ....
T Consensus 133 -~e~le~ai~--------~~tklV~lesp-~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a-~~~~~-----~p~~ 192 (425)
T PRK06084 133 -IAALEALID--------ERTKAVFCESI-GNPAGNIID----IQALADAAHRHGVPLIVDNTVA-TPVLC-----RPFE 192 (425)
T ss_pred -HHHHHHHhc--------cCCcEEEEeCC-CCCCCeecC----HHHHHHHHHHcCCEEEEECCCc-ccccC-----Chhh
Confidence 145666664 24678999986 788888775 8999999999999999999994 32222 1223
Q ss_pred CCCcEE--EecccccCCccccceeec
Q 003466 680 CVPDIA--CYGKLLTGGVIPLAATLA 703 (818)
Q Consensus 680 v~PDiv--tlgKgLggGy~PlsAvl~ 703 (818)
.-+|++ .++|.++|.--.+|.+++
T Consensus 193 ~gaDivv~S~tK~l~G~g~~~gG~v~ 218 (425)
T PRK06084 193 HGADIVVHSLTKYIGGHGTSIGGIVV 218 (425)
T ss_pred cCCCEEEECchhcccccccceeEEEE
Confidence 347776 689999863245665555
No 258
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.75 E-value=5.7e-07 Score=100.04 Aligned_cols=169 Identities=15% Similarity=0.147 Sum_probs=111.6
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCcc
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVI 696 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~ 696 (818)
..+++-| ++-.|.+. +.+.++++.+.|.++++++|+||++..|.. ..- .....+ .++++ +|||.+| .| +
T Consensus 133 ~v~l~nP--nNPTG~~~-s~~~l~~l~~~~~~~~~~vI~DEay~~~~~-~~s-~~~~~~-~~~vi~l~SfSK~~gl~G-l 205 (339)
T PRK06959 133 HLIVVNP--NNPTAERL-PAARLLRWHAQLAARGGTLIVDEAFADTLP-AAS-LAAHTD-RPGLVVLRSVGKFFGLAG-V 205 (339)
T ss_pred EEEEeCC--CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEECCCccCCC-ccc-chhccC-CCCEEEEecChhhcCCcc-h
Confidence 4778888 57778766 677788898889999999999999977632 111 111111 24433 8999998 77 7
Q ss_pred ccceeecchHHHhhccCChH--------------H----------------HHHHHHHHHHcCCCeeEEEeeeeEEEEEE
Q 003466 697 PLAATLATNAVFDSFVGDSK--------------L----------------WDLELIQQISSHRTVQRVVALGTLCAIEL 746 (818)
Q Consensus 697 PlsAvl~~~~i~~~l~~~~~--------------~----------------~~~~l~~~l~~~~~v~~vrg~Gl~~~iel 746 (818)
-+|.+++++++++.+..... . .++.+.+.+++++. .+...+.++-+.+
T Consensus 206 RiGy~v~~~~li~~l~~~~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~--~~~~~~~f~~~~~ 283 (339)
T PRK06959 206 RAGFVLAAPALLAALRDALGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHGF--AVHATPLFSWTDD 283 (339)
T ss_pred heEEEecCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC--CccCcceEEEEeC
Confidence 99999999999886643211 0 01123344555432 1222343333332
Q ss_pred ecCcccCCCchHHHHHHHHHHHhCCceEeecC--CEEEEECCCCChHHHHHHHHHHHHHHHHHHHHh
Q 003466 747 QAAGCNAGYGSLYAASLLKKLREDGVYMRPLG--NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKV 811 (818)
Q Consensus 747 ~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g--~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~ 811 (818)
. + +..+.+.|.++||+++..+ +.+|++.. -+++|.++++++|++.++.+++.
T Consensus 284 ~-~----------~~~l~~~l~~~GI~vr~~~~~~~lRisi~--~~~~e~~~l~~al~~~~~~~~~~ 337 (339)
T PRK06959 284 P-R----------AAALHAALARRGIWTRYFAPPPSVRFGLP--ADEAEWQRLEDALAECVPTLAAA 337 (339)
T ss_pred C-C----------HHHHHHHHHhCCeEEEECCCCCeEEEECC--CCHHHHHHHHHHHHHHHHHHhhc
Confidence 1 1 4568899999999999754 57787743 46789999999999988887653
No 259
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.75 E-value=1.1e-06 Score=109.07 Aligned_cols=278 Identities=14% Similarity=0.138 Sum_probs=156.3
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEE-EeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 442 YEPALECAELLLQGVGKGWASRAY-FSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~-f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.+...++.++|++++|. +.+. ..++|+.|+.++|..+ |.|...+|+ .+ +.+|....+-||+.
T Consensus 541 l~~i~e~q~~l~eltG~---d~~sl~~~~ga~ge~agL~a~-r~~~~~~G~------------~~-r~~vlis~~aH~sn 603 (954)
T PRK05367 541 RELIDQLEAWLAEITGY---DAVSLQPNAGAQGEYAGLLAI-RAYHESRGE------------GH-RDVCLIPSSAHGTN 603 (954)
T ss_pred HHHHHHHHHHHHHHHCC---CCEEECccHHHHHHHHHHHHH-HHHhhccCC------------CC-CCEEEEEchhhhhh
Confidence 35567889999999984 4454 4557888888888655 766554443 22 34566778889877
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
..++...|.+.. .++.... ..+ |
T Consensus 604 p~sa~~~G~~vv----------------------------~v~~d~~-------------G~i--------D-------- 626 (954)
T PRK05367 604 PASAVMAGMKVV----------------------------VVACDEN-------------GNI--------D-------- 626 (954)
T ss_pred HHHHHHCCCEEE----------------------------EECCCCC-------------CCc--------C--------
Confidence 665544432210 0110000 000 0
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
.+.|++.+. .+..++++|++--- ...|+...+ +++|.++|+++|+++++|-++.+ +-.|.. .-..+|
T Consensus 627 ~~~L~~~i~-----~~~~~la~V~it~p-st~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~-al~~l~-~pg~~G- 693 (954)
T PRK05367 627 LDDLRAKAE-----EHADNLAAIMITYP-STHGVFEET----IREICEIVHEHGGQVYLDGANMN-AQVGLA-RPGDIG- 693 (954)
T ss_pred HHHHHHHHh-----ccCCCeEEEEEEcC-CCCeeecCC----HHHHHHHHHHcCCEEEEECcChh-hccCCC-ChhhcC-
Confidence 256677775 23346666655431 233333344 89999999999999999999952 112211 011223
Q ss_pred CCcEEEec--cccc----CCccc-cceeecchHHHhhccCCh----------------H------------HH-------
Q 003466 681 VPDIACYG--KLLT----GGVIP-LAATLATNAVFDSFVGDS----------------K------------LW------- 718 (818)
Q Consensus 681 ~PDivtlg--KgLg----gGy~P-lsAvl~~~~i~~~l~~~~----------------~------------~~------- 718 (818)
.|+++++ |.++ +| -| +|.+.+++.+...+-+.. . ++
T Consensus 694 -ADi~~~s~HK~f~~P~G~G-GPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~G 771 (954)
T PRK05367 694 -ADVSHLNLHKTFCIPHGGG-GPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEG 771 (954)
T ss_pred -CCEEEecCcccCCCCcCCC-CCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHH
Confidence 6888776 8765 33 24 334555555443322110 0 00
Q ss_pred -----------HHHHHHHHHcCCCeeEEEee-ee-E--EEEEEecCcccCCCchHHHHHHHHHHHhCCceEee----cCC
Q 003466 719 -----------DLELIQQISSHRTVQRVVAL-GT-L--CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP----LGN 779 (818)
Q Consensus 719 -----------~~~l~~~l~~~~~v~~vrg~-Gl-~--~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p----~g~ 779 (818)
.+.+.++|+.+-.+. ..+. |. + +.+++..-+.. ....+..+.++|.+.|+.... ..+
T Consensus 772 lr~~a~~~~~~A~Yl~~~L~~~~~~~-~~~~~~~~~~e~i~~~~~~~~~---~g~~~~di~krL~d~G~~~~t~~~pv~~ 847 (954)
T PRK05367 772 LRQATEVAILNANYIAKRLKDHYPVL-YTGANGRVAHECILDLRPLKES---TGITVDDIAKRLIDYGFHAPTMSFPVAG 847 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCcc-ccCCCCCcccceEEEeeccccc---CCCCHHHHHHHHHHCCCeEeecCCccCC
Confidence 011223333321111 0110 00 1 11122110000 012356799999999998864 357
Q ss_pred EEEEECCCCChHHHHHHHHHHHHHHHHHHHHhH
Q 003466 780 VIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVE 812 (818)
Q Consensus 780 ~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~ 812 (818)
.+++.|.-..|++|||++++++....+++.++.
T Consensus 848 ~l~i~ptE~~s~~elDr~~~al~~i~~e~~~~~ 880 (954)
T PRK05367 848 TLMVEPTESESKAELDRFCDAMIAIRAEIDEVE 880 (954)
T ss_pred EEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999998887743
No 260
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.75 E-value=1.7e-06 Score=107.23 Aligned_cols=280 Identities=13% Similarity=0.056 Sum_probs=160.4
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEEeCChh-HHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYFSDNGS-TAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f~~SGs-eA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.+...++.++|++++| .+.|.|.++.+ .+-++-+.++ +.|.+.+|+ . ++++|....+-||+-
T Consensus 567 ~~~~~~~r~~la~i~g---~~~v~f~pnaga~ge~a~~~vi-~~~~~~~Gd------------~-~r~~vli~~~aH~sn 629 (993)
T PLN02414 567 QEMFEDLGDLLCEITG---FDSFSLQPNAGAAGEYAGLMVI-RAYHLSRGD------------H-HRNVCIIPVSAHGTN 629 (993)
T ss_pred HHHHHHHHHHHHHHhC---CCeEEEcCCCcHHHHHHHHHHH-HHHHhccCC------------C-CCCEEEeCCCcCccC
Confidence 3556789999999998 47888776655 3333333333 455444343 2 345677788999977
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
.....+.|.+. ..++..... .-|
T Consensus 630 ~a~a~~~G~~v----------------------------v~v~~d~~G-----------~vD------------------ 652 (993)
T PLN02414 630 PASAAMCGMKI----------------------------VVVGTDAKG-----------NIN------------------ 652 (993)
T ss_pred HHHHHHCCCEE----------------------------EEeccCCCC-----------CcC------------------
Confidence 65554433221 011110000 001
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
.+.|++.+. .+.+++++|++--. ...||...+ +++|.++|+++|+++++|=++.- +-.| -..-...
T Consensus 653 le~L~~~i~-----~~~~~ta~V~vt~p-Sn~gg~e~~----I~eI~~iah~~Galv~vDgAq~~-a~~~---l~~p~~~ 718 (993)
T PLN02414 653 IEELRKAAE-----AHKDNLAALMVTYP-STHGVYEEG----IDEICDIIHDNGGQVYMDGANMN-AQVG---LTSPGFI 718 (993)
T ss_pred HHHHHHHHh-----ccCCCeEEEEEECC-Cccccccch----HHHHHHHHHHcCCEEEEEecCHH-hccC---cCCcccc
Confidence 256777776 33457888877654 677887776 99999999999999999998841 1111 1111122
Q ss_pred CCcEEEe--ccccc----CCccccceeecchHHHhhccCC------------------hH----------------HHH-
Q 003466 681 VPDIACY--GKLLT----GGVIPLAATLATNAVFDSFVGD------------------SK----------------LWD- 719 (818)
Q Consensus 681 ~PDivtl--gKgLg----gGy~PlsAvl~~~~i~~~l~~~------------------~~----------------~~~- 719 (818)
-.|++++ .|.++ +|---+|.+.+++.+...+-+. .. ++.
T Consensus 719 GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~ 798 (993)
T PLN02414 719 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAM 798 (993)
T ss_pred CCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHH
Confidence 3588766 67665 2312256666666665433210 00 000
Q ss_pred -----------------HHHHHHHHcCCCeeEEEeeee---EEEEEEecCcccCCCchHHHHHHHHHHHhCCceEe----
Q 003466 720 -----------------LELIQQISSHRTVQRVVALGT---LCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMR---- 775 (818)
Q Consensus 720 -----------------~~l~~~l~~~~~v~~vrg~Gl---~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~---- 775 (818)
.-+.++|++...+......|. -+.+.+..-+... ...+..++++|++.|++..
T Consensus 799 lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~---g~~~~di~krL~d~Gihapt~~~ 875 (993)
T PLN02414 799 MGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTA---GIEPEDVAKRLMDYGFHAPTMSW 875 (993)
T ss_pred HCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecccccccc---CCCHHHHHHHHHHcCcEEeeecc
Confidence 112233333211111111121 1112222100000 0124678999999999875
Q ss_pred ecCCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhH
Q 003466 776 PLGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVE 812 (818)
Q Consensus 776 p~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~ 812 (818)
|..+.+++.|+-..|++|||++++++.....+.+++.
T Consensus 876 pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~~~ 912 (993)
T PLN02414 876 PVPGTLMIEPTESESKAELDRFCDALISIREEIADIE 912 (993)
T ss_pred ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3468899999999999999999999999998887643
No 261
>PLN02187 rooty/superroot1
Probab=98.74 E-value=2e-06 Score=99.70 Aligned_cols=300 Identities=13% Similarity=0.042 Sum_probs=163.8
Q ss_pred HHHHHHHHHhhhhccccc--CCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccc
Q 003466 419 IELARDMGYTAARFGHVM--FPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDF 495 (818)
Q Consensus 419 p~V~eAi~~q~~~~~~~~--~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~ 495 (818)
+++.+++.+.++...... ...+..+....+|+.+....+.+ .-+.+++++++++|...++... ...|
T Consensus 86 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l-----~~pG----- 155 (462)
T PLN02187 86 IEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESL-----ARPN----- 155 (462)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHh-----cCCC-----
Confidence 568888888776422111 11223345556666665432211 1258999999999999998865 1233
Q ss_pred cCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcccc
Q 003466 496 LGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEH 575 (818)
Q Consensus 496 ~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~ 575 (818)
..|++.+-+|.+....+ ...|... ..++++..
T Consensus 156 -----------d~Vlv~~P~y~~y~~~~-~~~g~~~----------------------------~~~~l~~~-------- 187 (462)
T PLN02187 156 -----------ANILLPRPGFPHYDARA-AYSGLEV----------------------------RKFDLLPE-------- 187 (462)
T ss_pred -----------CEEEEeCCCCccHHHHH-HHcCCEE----------------------------EEEeCccc--------
Confidence 36888888888643221 1112110 01111000
Q ss_pred ccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCC
Q 003466 576 KDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKI 655 (818)
Q Consensus 576 ~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gi 655 (818)
++ |. .| .+.+++.+. ....+.+++-| +.-.|.+. +.+.+++|.++|++||+
T Consensus 188 -----~~----~~--~d--------~~~l~~~~~-------~~~~~v~i~nP--~NPTG~v~-s~e~l~~i~~~a~~~~i 238 (462)
T PLN02187 188 -----KE----WE--ID--------LEGIEAIAD-------ENTVAMVVINP--NNPCGNVY-SHDHLKKVAETARKLGI 238 (462)
T ss_pred -----cC----Cc--cC--------HHHHHHhcC-------CCcEEEEEeCC--CCCCCCcc-CHHHHHHHHHHHHHCCC
Confidence 00 00 00 145555543 23456777788 57777766 78999999999999999
Q ss_pred cEEEeecccCcccCCccc-hhccc-CCCCcE--EEeccccc-CCccccceeecc-h-HH---Hhhc---c----C--C-h
Q 003466 656 PVIFDEVFTGFWRLGVET-TADLL-GCVPDI--ACYGKLLT-GGVIPLAATLAT-N-AV---FDSF---V----G--D-S 715 (818)
Q Consensus 656 lLI~DEV~TGfGRtG~~~-a~e~~-gv~PDi--vtlgKgLg-gGy~PlsAvl~~-~-~i---~~~l---~----~--~-~ 715 (818)
++|.||++..|--.|..+ ....+ +..+=+ -+|||..+ .| +-+|.+++. + .+ ++.+ . - . .
T Consensus 239 ~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pG-lRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s 317 (462)
T PLN02187 239 MVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPG-WKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPA 317 (462)
T ss_pred EEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcc-ceeEEEEecCchhHHHHHHHHHHHHHhccccCCCC
Confidence 999999998752223221 11111 111212 27999944 67 789988873 2 21 1111 0 0 0 0
Q ss_pred H--------HHH------------------HHHHHHHHcCCCeeE-EEee-eeEEEEEEecCcccCCCchHHHHHHH-HH
Q 003466 716 K--------LWD------------------LELIQQISSHRTVQR-VVAL-GTLCAIELQAAGCNAGYGSLYAASLL-KK 766 (818)
Q Consensus 716 ~--------~~~------------------~~l~~~l~~~~~v~~-vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~-~~ 766 (818)
. .+. +.+.+.|+.++.+.. .... |.++-+.+.... .... .....++ +.
T Consensus 318 ~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~-~~~~--~~~~~~~~~l 394 (462)
T PLN02187 318 TIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSL-MDNI--KDDIDFCVKL 394 (462)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhh-CCCC--CCHHHHHHHH
Confidence 1 110 112334455553321 1223 455544443210 0000 0122344 45
Q ss_pred HHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHh
Q 003466 767 LREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKV 811 (818)
Q Consensus 767 l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~ 811 (818)
+.++||++.|+ .+.+|+... ..++.+++.+++|.+.++...+.
T Consensus 395 l~~~gV~v~pG~~fg~~~~iRis~~--~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 395 AREENLVFLPGDALGLKNWMRITIG--VEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred HhhCCEEEECccccCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHHhhhc
Confidence 57899999984 267788765 46899999999999998776543
No 262
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=98.74 E-value=1.3e-06 Score=97.76 Aligned_cols=165 Identities=18% Similarity=0.222 Sum_probs=97.5
Q ss_pred EEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch-hcccCCCCcEE---Eeccccc-CC
Q 003466 620 IGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT-ADLLGCVPDIA---CYGKLLT-GG 694 (818)
Q Consensus 620 iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a-~e~~gv~PDiv---tlgKgLg-gG 694 (818)
...++..| ++-.|.+.. -++|.++|+++++ +|+||++..|-..+..-. ....+-.+.++ +|||.++ .|
T Consensus 150 ~~~~l~nP--~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~G 222 (360)
T PRK07392 150 DGLLLNNP--HNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPG 222 (360)
T ss_pred CEEEEeCC--CCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCc
Confidence 34556666 788888875 4678888999986 666999988854443211 11112223333 7999999 88
Q ss_pred ccccceeecchHHHhhccCCh--H------------H-----H-----------HHHHHHHHHcCCCeeEEEeeeeEEEE
Q 003466 695 VIPLAATLATNAVFDSFVGDS--K------------L-----W-----------DLELIQQISSHRTVQRVVALGTLCAI 744 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~--~------------~-----~-----------~~~l~~~l~~~~~v~~vrg~Gl~~~i 744 (818)
+.+|.+++++++++.+.... . . + .+.+.+.++.++.+.-..+.|.++-+
T Consensus 223 -lRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~ 301 (360)
T PRK07392 223 -LRLGYAIAHPDRLQRWQQWRDPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLV 301 (360)
T ss_pred -hheeeeeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEE
Confidence 79999999998887654211 0 0 0 01133444554443322334555544
Q ss_pred EEecCcccCCCchHHHHHHHHHHH-hCCceEeec---C----CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 745 ELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL---G----NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 745 el~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~---g----~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
.+.. .+.+++..++ ++||++.|+ + +.+|+.... .++.+++.+.+++.+
T Consensus 302 ~~~~----------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~~~l~~al~~~~ 357 (360)
T PRK07392 302 QSQG----------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT---EAENQRLLEALAAIL 357 (360)
T ss_pred EcCC----------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC---HHHHHHHHHHHHHHh
Confidence 4422 1456777764 679999973 1 467877543 344455555555443
No 263
>PLN02651 cysteine desulfurase
Probab=98.74 E-value=7.8e-07 Score=99.71 Aligned_cols=209 Identities=11% Similarity=0.076 Sum_probs=119.9
Q ss_pred eeecccccccccCCCCCCHHHHHHHHHhhhhc-ccccC-C----CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHH
Q 003466 401 QFDACASWWTQGPDATLQIELARDMGYTAARF-GHVMF-P----ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAI 474 (818)
Q Consensus 401 ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~-~----~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~ 474 (818)
|||..+ .+-- ++++.+|+.+.+... +.... . ....+...++.++|+++++.. .+.++|+++|++|+
T Consensus 2 Yld~a~------~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~t~~~t~a~ 73 (364)
T PLN02651 2 YLDMQA------TTPI-DPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGAD-PKEIIFTSGATESN 73 (364)
T ss_pred cccCcC------CCCC-CHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHHHH
Confidence 566543 4445 889999998877542 21110 0 001244567778888888753 35799999999999
Q ss_pred HHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccc
Q 003466 475 EIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVF 554 (818)
Q Consensus 475 e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~ 554 (818)
..+++.+++.+. +. ..+||+....|++ ....+..-.. .+.
T Consensus 74 ~~~l~~~~~~~~-~~----------------g~~vl~~~~~h~s-~~~~~~~~~~--------------~g~-------- 113 (364)
T PLN02651 74 NLAIKGVMHFYK-DK----------------KKHVITTQTEHKC-VLDSCRHLQQ--------------EGF-------- 113 (364)
T ss_pred HHHHHHHHHhcc-CC----------------CCEEEEcccccHH-HHHHHHHHHh--------------cCC--------
Confidence 999987733221 11 1356665544433 3222111000 000
Q ss_pred ccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCC
Q 003466 555 MYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGG 634 (818)
Q Consensus 555 ~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG 634 (818)
....++.+... -.| .+.+++.|. +++.+|++..+ ++..|
T Consensus 114 ---~v~~v~~~~~~-----------~~d------------------~~~l~~~i~--------~~t~lv~v~~~-~n~tG 152 (364)
T PLN02651 114 ---EVTYLPVKSDG-----------LVD------------------LDELAAAIR--------PDTALVSVMAV-NNEIG 152 (364)
T ss_pred ---EEEEEccCCCC-----------cCC------------------HHHHHHhcC--------CCcEEEEEECC-CCCce
Confidence 00011111000 000 145666664 24677888876 78889
Q ss_pred cccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEe--cccccCCccccceeecchHHHh
Q 003466 635 MHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACY--GKLLTGGVIPLAATLATNAVFD 709 (818)
Q Consensus 635 ~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl--gKgLggGy~PlsAvl~~~~i~~ 709 (818)
.+.+ +++|.++|++||+++++|.+|+ +|.. .+-.+.+ .+|++++ -| ++|. ..+|++.++++..+
T Consensus 153 ~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~--~~~~~~~--~~D~~~~s~hK-~~gp-~G~g~l~v~~~~~~ 218 (364)
T PLN02651 153 VIQP----VEEIGELCREKKVLFHTDAAQA-VGKI--PVDVDDL--GVDLMSISGHK-IYGP-KGVGALYVRRRPRV 218 (364)
T ss_pred eccc----HHHHHHHHHHcCCEEEEEcchh-hCCc--ccCcccC--CCCEEEechhh-hCCC-CceEEEEEcCCCCC
Confidence 8887 8999999999999999999995 4321 1222333 3698865 46 5432 33677777876544
No 264
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.73 E-value=4.4e-06 Score=94.65 Aligned_cols=300 Identities=10% Similarity=0.017 Sum_probs=164.0
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCC---CC-CcEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG---WA-SRAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~---~l-~~v~f~~SGseA~e 475 (818)
.+||+..|. ..++ - .+.+.+|+.+.+.....+....+..+....+|+.+.+..+.+ .- +.+++++++++|..
T Consensus 29 ~~i~l~~~~--p~~~-~-~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~ 104 (393)
T TIGR03538 29 PPIALSIGE--PKHP-T-PAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALF 104 (393)
T ss_pred CeEEecCCC--CCCC-C-CHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHH
Confidence 778877643 2233 3 688999999876543322222334556777777776643311 12 35888999999999
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccce-EEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIEL-KVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVF 554 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~-~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~ 554 (818)
.++++.. . ++.. .|++-+-+|-+.... ....|..
T Consensus 105 ~~~~~l~-----~---------------~gd~~~vlv~~P~y~~~~~~-~~~~g~~------------------------ 139 (393)
T TIGR03538 105 AFAQAVI-----N---------------PGQAPLVVMPNPFYQIYEGA-ALLAGAE------------------------ 139 (393)
T ss_pred HHHHHHc-----C---------------CCCcceEEecCCCCcchHHH-HHhcCCe------------------------
Confidence 8888651 1 2222 366655566542211 1111111
Q ss_pred ccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEE-ccccccCC
Q 003466 555 MYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALII-EPVVHAAG 633 (818)
Q Consensus 555 ~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~g 633 (818)
.+.+|-.- + + .|. .+ .+.+++.+. .++.+|++ .| ++-.
T Consensus 140 ------~~~v~~~~--------~---~----~~~--~d--------~~~l~~~~~--------~~~k~i~l~~p--~NPt 178 (393)
T TIGR03538 140 ------PYFLNCTA--------E---N----GFL--PD--------FDAVPESVW--------RRCQLLFVCSP--GNPT 178 (393)
T ss_pred ------EEEeeccc--------c---C----CCC--CC--------HHHHHHHHh--------hcceEEEEeCC--CCCc
Confidence 11111000 0 0 000 00 134444443 13455544 44 7878
Q ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCC--ccc----hhcccCC--CCcE---EEeccccc-CCcccccee
Q 003466 634 GMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLG--VET----TADLLGC--VPDI---ACYGKLLT-GGVIPLAAT 701 (818)
Q Consensus 634 G~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG--~~~----a~e~~gv--~PDi---vtlgKgLg-gGy~PlsAv 701 (818)
|.+. +.+.+++|.++|++||+++|.||++..|-..+ ... .....+. .+.+ -+|||.++ .| +-+|.+
T Consensus 179 G~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G-lRvG~~ 256 (393)
T TIGR03538 179 GAVL-SLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG-LRSGFV 256 (393)
T ss_pred Cccc-CHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc-cceEEE
Confidence 8866 78999999999999999999999997653222 111 1111221 1122 37999754 45 788899
Q ss_pred ecchHHHhhccCC--------hH--------------HHH----------HHHHHHHHcCCCeeEEEeeeeEEEEEEecC
Q 003466 702 LATNAVFDSFVGD--------SK--------------LWD----------LELIQQISSHRTVQRVVALGTLCAIELQAA 749 (818)
Q Consensus 702 l~~~~i~~~l~~~--------~~--------------~~~----------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~ 749 (818)
++++++++.+... .. .+. +.+.+.++.+-.+ ..-..|.++-+.+..+
T Consensus 257 i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~-~~p~gg~f~~~~~~~~ 335 (393)
T TIGR03538 257 AGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQVLDL-ELPDAGFYLWPKVPGD 335 (393)
T ss_pred ecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhhCcc-cCCCeeEEEEEECCCC
Confidence 9998887654311 00 010 0122223322001 1122355555555311
Q ss_pred cccCCCchHHHHHHHHHHH-hCCceEeec-------------CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 750 GCNAGYGSLYAASLLKKLR-EDGVYMRPL-------------GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 750 ~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------------g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
...+++.|+ ++||.+.|+ .+.+|++.. .+++++++++++|.+.
T Consensus 336 ----------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 336 ----------DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV--APLEECVEAAERIRSF 392 (393)
T ss_pred ----------HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec--CCHHHHHHHHHHHHHh
Confidence 345777776 579999752 146777654 3688999999888763
No 265
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=98.72 E-value=4.5e-07 Score=103.30 Aligned_cols=206 Identities=18% Similarity=0.135 Sum_probs=125.8
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
+.++...+|+++|+++.+. +.+++++||+.|+..++.... ..| ..||+.+. .||.
T Consensus 67 ~~~p~~~~le~~lA~l~g~---~~al~~~sG~~Ai~~~l~all-----~~G----------------d~Vl~~~~-~~~~ 121 (403)
T PRK07810 67 YGNPTVSMFEERLRLIEGA---EACFATASGMSAVFTALGALL-----GAG----------------DRLVAARS-LFGS 121 (403)
T ss_pred CCCchHHHHHHHHHHHhCC---CcEEEECChHHHHHHHHHHHh-----CCC----------------CEEEEccC-Ccch
Confidence 4567788999999999873 688999999999999887541 222 25665544 5555
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
++...... ....|.. ...++ .+|
T Consensus 122 t~~~~~~~-------------~~~~G~~-------------v~~vd--------------~~d----------------- 144 (403)
T PRK07810 122 CFVVCNEI-------------LPRWGVE-------------TVFVD--------------GED----------------- 144 (403)
T ss_pred HHHHHHHH-------------HHHcCcE-------------EEEEC--------------CCC-----------------
Confidence 43322110 0000000 00000 111
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .++.+|++|.. .+..|.+.+ +++|.++|+++|+++|+||++. .+-.... . .+|
T Consensus 145 -~~~l~~ai~--------~~tklV~~esp-~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a-~~~~~~~--~-~~g 206 (403)
T PRK07810 145 -LSQWEEALS--------VPTQAVFFETP-SNPMQSLVD----IAAVSELAHAAGAKVVLDNVFA-TPLLQRG--L-PLG 206 (403)
T ss_pred -HHHHHHhcC--------cCceEEEEECC-CCCCCeecC----HHHHHHHHHHcCCEEEEECCCC-ccccCCh--h-hcC
Confidence 145666664 24678999976 677777665 9999999999999999999984 2222111 1 234
Q ss_pred CCCcEE--EecccccC-Ccccc-ceeecchHHHhh-cc----CCh-H------------------HHH------HHHHHH
Q 003466 680 CVPDIA--CYGKLLTG-GVIPL-AATLATNAVFDS-FV----GDS-K------------------LWD------LELIQQ 725 (818)
Q Consensus 680 v~PDiv--tlgKgLgg-Gy~Pl-sAvl~~~~i~~~-l~----~~~-~------------------~~~------~~l~~~ 725 (818)
.|++ .++|.++| | -.+ |+++++++.+.. +. ..+ . .++ ..+.+.
T Consensus 207 --aDivv~S~tK~l~g~g-~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~ 283 (403)
T PRK07810 207 --ADVVVYSGTKHIDGQG-RVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLETLALRVRHSNASALRIAEF 283 (403)
T ss_pred --CcEEEccCCceecCCc-CceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH
Confidence 4776 57898875 4 234 567777765431 21 100 0 111 124455
Q ss_pred HHcCCCeeEEE------------------eeeeEEEEEEec
Q 003466 726 ISSHRTVQRVV------------------ALGTLCAIELQA 748 (818)
Q Consensus 726 l~~~~~v~~vr------------------g~Gl~~~iel~~ 748 (818)
|+.+|.|..|. |.|.|+.+++..
T Consensus 284 L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 284 LEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred HhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 77888887776 789999999964
No 266
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=98.72 E-value=8.9e-07 Score=100.06 Aligned_cols=182 Identities=15% Similarity=0.114 Sum_probs=107.7
Q ss_pred HHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCC
Q 003466 419 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGK 498 (818)
Q Consensus 419 p~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~ 498 (818)
++-.+++.+.+..... ...+...+|+++|+++++. +.+++++||++|+..|++.. . -..|
T Consensus 14 ~~e~~~~~~~l~~~~~-----~~g~~~~~le~~la~~~g~---~~~v~~~sgt~al~lal~al-~---~~~G-------- 73 (379)
T PRK11658 14 DEELAAVKEVLRSGWI-----TTGPKNQALEQAFCQLTGN---QHAIAVSSATAGMHITLMAL-G---IGPG-------- 73 (379)
T ss_pred HHHHHHHHHHHHcCCc-----cCCHhHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHHc-C---CCCC--------
Confidence 4557777776654321 1245678999999999974 57888999999999999865 1 0122
Q ss_pred CccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCc-chhhhhcccccc
Q 003466 499 DTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLP-EWLYSKIVEHKD 577 (818)
Q Consensus 499 ~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P-~~~~~~~~~~~~ 577 (818)
..||+...+|.+.. .++...|... ..+++. +.
T Consensus 74 --------d~Viv~~~~~~~~~-~~~~~~G~~~----------------------------v~vd~~~~~---------- 106 (379)
T PRK11658 74 --------DEVITPSLTWVSTL-NMIVLLGATP----------------------------VMVDVDRDT---------- 106 (379)
T ss_pred --------CEEEECCCcHHHHH-HHHHHcCCEE----------------------------EEEecCCCc----------
Confidence 36777777776643 2222222110 001100 00
Q ss_pred cccc-CccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCc
Q 003466 578 ITFC-SRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIP 656 (818)
Q Consensus 578 ~~~n-d~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gil 656 (818)
++ | .+.+++.+. .++.+|+ |+ .. .|...+ +++|.++|++||++
T Consensus 107 --~~~d------------------~~~l~~~i~--------~~tkav~--~~-~~-~G~~~d----~~~i~~~a~~~gi~ 150 (379)
T PRK11658 107 --LMVT------------------PEAIEAAIT--------PRTKAII--PV-HY-AGAPAD----LDAIRAIGERYGIP 150 (379)
T ss_pred --CCcC------------------HHHHHHhcc--------cCCeEEE--Ee-CC-CCCcCC----HHHHHHHHHHcCCe
Confidence 10 1 145666553 2455665 43 32 455443 78999999999999
Q ss_pred EEEeeccc-CcccCCccchhcccCCCCcEEEec--ccccCCccccceeecc-hHHHh
Q 003466 657 VIFDEVFT-GFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLAT-NAVFD 709 (818)
Q Consensus 657 LI~DEV~T-GfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~-~~i~~ 709 (818)
+|.|++|+ |.-..|+.. ..+|+ |+..|+ |.|++| ..|+++++ +++++
T Consensus 151 vi~D~a~a~g~~~~~~~~--g~~g~--~~~Sf~~~K~l~~g--~GG~v~~~~~~~~~ 201 (379)
T PRK11658 151 VIEDAAHAVGTYYKGRHI--GARGT--AIFSFHAIKNITCA--EGGLVVTDDDELAD 201 (379)
T ss_pred EEEECCCccCCeECCeec--CCCCC--EEEeCCCCCcCccc--CceEEEECCHHHHH
Confidence 99999996 432223221 12343 566655 788776 46666664 56544
No 267
>PTZ00376 aspartate aminotransferase; Provisional
Probab=98.72 E-value=1.8e-06 Score=98.26 Aligned_cols=180 Identities=11% Similarity=0.124 Sum_probs=103.9
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc---cchhccc
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV---ETTADLL 678 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~---~~a~e~~ 678 (818)
+.+++.+++ ...+..++++-. .++-.|.+. +.+-+++|.++|++||+++|.||+...|-.-+. .-....+
T Consensus 164 ~~l~~~~~~-----~~~~~~~~~~~~-p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 236 (404)
T PTZ00376 164 DGMLEDLRT-----APNGSVVLLHAC-AHNPTGVDP-TEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLF 236 (404)
T ss_pred HHHHHHHHh-----CCCCCEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHH
Confidence 445566642 112223444433 278888877 899999999999999999999999987733221 1011111
Q ss_pred -CCCCcE---EEeccccc-CCcccccee---ecchHHHh----hcc-------CC-hH--------HHH---------H-
Q 003466 679 -GCVPDI---ACYGKLLT-GGVIPLAAT---LATNAVFD----SFV-------GD-SK--------LWD---------L- 720 (818)
Q Consensus 679 -gv~PDi---vtlgKgLg-gGy~PlsAv---l~~~~i~~----~l~-------~~-~~--------~~~---------~- 720 (818)
...+.+ .+|||.++ .| +-+|.+ ++++++.+ .+. .. .. .+. +
T Consensus 237 ~~~~~~vi~i~SfSK~~~~~G-lRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 315 (404)
T PTZ00376 237 AERGVEFLVAQSFSKNMGLYG-ERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSE 315 (404)
T ss_pred HhcCCcEEEEEeCCCcccccc-cccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHH
Confidence 111222 37999999 78 789987 56765332 211 00 10 110 0
Q ss_pred -------------HHHHHHHcCCC---eeEEEeeeeEEEE-EEecCcccCCCchHHHHHHHHHHHhC-CceEeecCCEEE
Q 003466 721 -------------ELIQQISSHRT---VQRVVALGTLCAI-ELQAAGCNAGYGSLYAASLLKKLRED-GVYMRPLGNVIY 782 (818)
Q Consensus 721 -------------~l~~~l~~~~~---v~~vrg~Gl~~~i-el~~~~~~~~~~~~~a~~~~~~l~e~-Gvlv~p~g~~ir 782 (818)
.+.+.+++++. ...+...|.++.+ .+ ...++++|.++ ||++.|++ |
T Consensus 316 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~-------------~~~~~~~L~~~~~v~v~p~~---R 379 (404)
T PTZ00376 316 LKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGL-------------TKEQVERLIEKYHIYLLDNG---R 379 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCC-------------CHHHHHHHHHhCCEeecCCC---e
Confidence 01122333321 1112233433322 22 12577788866 99999875 5
Q ss_pred EECCCCChHHHHHHHHHHHHHHHH
Q 003466 783 LMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 783 ~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
++... .+++++++++++|.+++.
T Consensus 380 is~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 380 ISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred EEEec-cCHHhHHHHHHHHHHHHh
Confidence 55433 778999999999998764
No 268
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=98.71 E-value=1.7e-06 Score=99.13 Aligned_cols=199 Identities=13% Similarity=0.046 Sum_probs=110.9
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccC-CCcccCCHHHHHHHHHHHHhcCCcEEEeecccCc----------ccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAA-GGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGF----------WRLG 670 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~-gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGf----------GRtG 670 (818)
+.|++.|.+ .+..++++|+++-- ... ||. +.+.+.+++++++|++||+.||.|+++.-. |..+
T Consensus 139 e~Le~~I~~----~~~~~~~~I~v~~p-~N~~gG~-~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~ 212 (431)
T cd00617 139 AKLEKLIDE----VGAENIPYIVLTIT-NNTAGGQ-PVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRD 212 (431)
T ss_pred HHHHHHhCc----ccCCCccEEEEECC-cCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccC
Confidence 677777763 22456888888732 343 454 558999999999999999999999997421 1222
Q ss_pred ccch---hcccCCCCcEEEec--ccccCCccccc-eeecch-HHHhhccCCh--------------H--------H----
Q 003466 671 VETT---ADLLGCVPDIACYG--KLLTGGVIPLA-ATLATN-AVFDSFVGDS--------------K--------L---- 717 (818)
Q Consensus 671 ~~~a---~e~~gv~PDivtlg--KgLggGy~Pls-Avl~~~-~i~~~l~~~~--------------~--------~---- 717 (818)
+-.+ .+.+. --|..+|+ |..+. |+| .+++++ ++++.+.... + +
T Consensus 213 ~si~ei~~e~~s-~sd~~~mS~~K~~~~---~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~ 288 (431)
T cd00617 213 KSIAEIAREMFS-YADGCTMSAKKDGLV---NIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV 288 (431)
T ss_pred CCHHHHHHHhhc-cCCEEEEEeecCCCC---ccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc
Confidence 2111 01111 24555554 43332 333 477765 5766554210 0 0
Q ss_pred ----HH------HHHHHHHHcCCCeeEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEee---------
Q 003466 718 ----WD------LELIQQISSHRTVQRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRP--------- 776 (818)
Q Consensus 718 ----~~------~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p--------- 776 (818)
+. +.+.+.|++.+.. -+. .-|..+-++...-..+..+...-+..++.+|+ +.||.+.-
T Consensus 289 ~~~~l~~~~~~r~~l~~~L~~~G~~-v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~ 367 (431)
T cd00617 289 EEDYLRHRVEQVRYLGDRLDEAGVP-IVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD 367 (431)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCCC-ccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccC
Confidence 00 1123444444321 122 23334444433211111111113556775555 66787541
Q ss_pred --c-------CCEEEEECCC-CChHHHHHHHHHHHHHHHHHHHHh
Q 003466 777 --L-------GNVIYLMCGP-CSSPEVCSQLLLKLYQRLEEFDKV 811 (818)
Q Consensus 777 --~-------g~~ir~~ppl-~~t~edId~~~~~l~~~l~~l~~~ 811 (818)
. -+.+|+..|- +.|.+++|.+.+++.++++..+.+
T Consensus 368 ~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~~ 412 (431)
T cd00617 368 PNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERREDI 412 (431)
T ss_pred CCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhhC
Confidence 1 1578998887 789999999999999998876543
No 269
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=98.71 E-value=6.9e-07 Score=101.20 Aligned_cols=170 Identities=14% Similarity=0.086 Sum_probs=103.2
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
+.++...+|+++|+++.+. +.+++++||++|+..++.... +.| ..|++.+..|+|.
T Consensus 49 ~~~pt~~~L~~~lA~l~g~---~~~i~~~sg~~Ai~~~l~~l~-----~~G----------------D~Vl~~~~~y~~~ 104 (386)
T PRK08045 49 RGNPTRDVVQRALAELEGG---AGAVLTNTGMSAIHLVTTVFL-----KPG----------------DLLVAPHDCYGGS 104 (386)
T ss_pred CCCccHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHHHc-----CCC----------------CEEEEcCCCcHHH
Confidence 4567788999999998873 479999999999998887541 222 3677777777653
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
......+.... +. .+ .+.|. .+
T Consensus 105 ~~~~~~~~~~~--------------gi--------------~v----------------~~vd~-------~d------- 126 (386)
T PRK08045 105 YRLFDSLAKRG--------------CY--------------RV----------------LFVDQ-------GD------- 126 (386)
T ss_pred HHHHHHHHhhC--------------Ce--------------EE----------------EEeCC-------CC-------
Confidence 21111111000 00 00 00000 00
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .++.+|++|.. .+..|.+.+ +++|.++|+++|+++|+||++... -.. ....
T Consensus 127 -~e~l~~~l~--------~~tklV~l~sP-~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~-~~~-----~pl~ 186 (386)
T PRK08045 127 -EQALRAALA--------EKPKLVLVESP-SNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSP-ALQ-----NPLA 186 (386)
T ss_pred -HHHHHHhcc--------cCCeEEEEECC-CCCCCEecC----HHHHHHHHHHcCCEEEEECCCCcc-ccC-----Cchh
Confidence 134555553 24578888875 777787775 899999999999999999998532 111 1122
Q ss_pred CCCcEE--EecccccCC-ccccceeec-chHHHhhc
Q 003466 680 CVPDIA--CYGKLLTGG-VIPLAATLA-TNAVFDSF 711 (818)
Q Consensus 680 v~PDiv--tlgKgLggG-y~PlsAvl~-~~~i~~~l 711 (818)
.-.|++ .+.|-++|. =.-.|++++ ++++.+.+
T Consensus 187 ~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l 222 (386)
T PRK08045 187 LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTEL 222 (386)
T ss_pred hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHH
Confidence 234776 589988751 023556655 46555433
No 270
>PRK05968 hypothetical protein; Provisional
Probab=98.71 E-value=8.3e-07 Score=100.66 Aligned_cols=135 Identities=14% Similarity=0.144 Sum_probs=84.4
Q ss_pred EEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccC-Ccc
Q 003466 620 IGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTG-GVI 696 (818)
Q Consensus 620 iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLgg-Gy~ 696 (818)
..+|++|.. .+..+ +...+++|.++|++||+++|+|+++..+ -.... . .+|+ |++ +++|.++| | -
T Consensus 148 tklV~ie~p-t~~~~----~~~dl~~i~~la~~~gi~vivD~a~a~~-~~~~p--~-~~g~--Divv~S~tK~l~g~~-~ 215 (389)
T PRK05968 148 AKLLYLESP-TSWVF----ELQDVAALAALAKRHGVVTMIDNSWASP-VFQRP--I-TLGV--DLVIHSASKYLGGHS-D 215 (389)
T ss_pred CCEEEEECC-CCCCC----cHHHHHHHHHHHHHcCCEEEEECCCcch-hccCc--h-hcCC--cEEEeeccccccCCC-C
Confidence 457888864 44333 4566999999999999999999998432 22221 1 1343 766 68899986 3 2
Q ss_pred c-cceeecchHHHhhccC------ChH------------------HH------HHHHHHHHHcCCCeeEEE---------
Q 003466 697 P-LAATLATNAVFDSFVG------DSK------------------LW------DLELIQQISSHRTVQRVV--------- 736 (818)
Q Consensus 697 P-lsAvl~~~~i~~~l~~------~~~------------------~~------~~~l~~~l~~~~~v~~vr--------- 736 (818)
+ .|++++++++++.+.. +.. .+ .+.+.+.|+.+|.|..|.
T Consensus 216 ~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~ 295 (389)
T PRK05968 216 TVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPP 295 (389)
T ss_pred eEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChH
Confidence 2 3556677876654431 100 11 123456677888876665
Q ss_pred ----eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceE
Q 003466 737 ----ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYM 774 (818)
Q Consensus 737 ----g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv 774 (818)
|.|.++.|++... ..+.+|++.|...++-+
T Consensus 296 ~~~~g~g~~~sf~~~~~--------~~~~~f~~~L~~~~~~~ 329 (389)
T PRK05968 296 AGLSGTSGLFSFIFREG--------IDVRAFADALKLFRLGV 329 (389)
T ss_pred HhCCCCceEEEEEECCH--------HHHHHHHHhCCccEEec
Confidence 5677999998632 33567777776655433
No 271
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.71 E-value=4.7e-06 Score=96.59 Aligned_cols=309 Identities=19% Similarity=0.208 Sum_probs=194.2
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccc-----cCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHV-----MFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTA 473 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~-----~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA 473 (818)
..+||..|+- .. .+--...+.+++.+.+...... ....+..+....+++.+...-|-. ..+.++.+++..+|
T Consensus 90 ~~i~f~~g~p-~~-~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~a 167 (459)
T COG1167 90 SVIDFAGGLP-DP-SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQA 167 (459)
T ss_pred ceecCCCCCC-Cc-ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHH
Confidence 6788887662 22 2221456666666655433221 112344566778888887322211 12579999888889
Q ss_pred HHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcc
Q 003466 474 IEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTV 553 (818)
Q Consensus 474 ~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~ 553 (818)
.+...++. -..| ..|++=+-+|||.. .++...|.+
T Consensus 168 l~l~~~~l-----~~pG----------------d~v~vE~PtY~~~~-~~~~~~g~~----------------------- 202 (459)
T COG1167 168 LDLLLRLL-----LDPG----------------DTVLVEDPTYPGAL-QALEALGAR----------------------- 202 (459)
T ss_pred HHHHHHHh-----CCCC----------------CEEEEcCCCcHHHH-HHHHHcCCc-----------------------
Confidence 88777766 1233 26777778899743 112211111
Q ss_pred cccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCC
Q 003466 554 FMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAG 633 (818)
Q Consensus 554 ~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~g 633 (818)
.+++|-.- + .-+ .+.|++.++. .++.++.+-|..|.-.
T Consensus 203 -------~~~vp~d~------------~--------G~~--------~e~le~~~~~-------~~~k~~y~~P~~qNPt 240 (459)
T COG1167 203 -------VIPVPVDE------------D--------GID--------PEALEEALAQ-------WKPKAVYVTPTFQNPT 240 (459)
T ss_pred -------EEecCCCC------------C--------CCC--------HHHHHHHHhh-------cCCcEEEECCCCCCCC
Confidence 12222100 0 001 2667777762 3788999999999999
Q ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-----hhcccCCCCcEEEecccccCCccccceeecchHHH
Q 003466 634 GMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-----TADLLGCVPDIACYGKLLTGGVIPLAATLATNAVF 708 (818)
Q Consensus 634 G~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-----a~e~~gv~PDivtlgKgLggGy~PlsAvl~~~~i~ 708 (818)
|..+ +.+==++|.++|++||+.+|=||+..=| +....- +....+-.-=+-+|||.|.=| +-+|.++++++++
T Consensus 241 G~tm-s~~rR~~Ll~lA~~~~~~IIEDD~y~el-~~~~~p~~~l~~ld~~~rViy~gSFSK~l~Pg-lRlG~vv~p~~~~ 317 (459)
T COG1167 241 GVTM-SLERRKALLALAEKYDVLIIEDDYYGEL-RYDGPPPPPLKALDAPGRVIYLGSFSKTLAPG-LRLGYVVAPPELI 317 (459)
T ss_pred CCcc-CHHHHHHHHHHHHHcCCeEEeeCcchhh-hcCCCCCCChHhhCCCCCEEEEeeehhhcccc-cceeeeeCCHHHH
Confidence 9888 7888999999999999999999999655 333211 111111111245999999988 7999999999988
Q ss_pred hhccCChH----------------H-----H--------------HHHHHHHHHcC-C-CeeEEE-eeeeEEEEEEecCc
Q 003466 709 DSFVGDSK----------------L-----W--------------DLELIQQISSH-R-TVQRVV-ALGTLCAIELQAAG 750 (818)
Q Consensus 709 ~~l~~~~~----------------~-----~--------------~~~l~~~l~~~-~-~v~~vr-g~Gl~~~iel~~~~ 750 (818)
+.+..... . + ++.+.+.+.++ + .+.-.. ..|+++-+++...
T Consensus 318 ~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~- 396 (459)
T COG1167 318 EKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG- 396 (459)
T ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCC-
Confidence 76643211 0 0 01233445444 3 222222 3378887877654
Q ss_pred ccCCCchHHHHHHHHHHHhCCceEeec----------CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 751 CNAGYGSLYAASLLKKLREDGVYMRPL----------GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 751 ~~~~~~~~~a~~~~~~l~e~Gvlv~p~----------g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
..+..+..+++++|+.+.|. .+.+|+.... .++++|++.+..|.+++.+..
T Consensus 397 -------~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 397 -------IDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred -------CCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHHh
Confidence 23667889999999999871 2578988876 458999999999999987754
No 272
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=98.70 E-value=8.7e-07 Score=99.68 Aligned_cols=205 Identities=15% Similarity=0.099 Sum_probs=120.3
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
.+.++...+|+++|+++.+. +..+.++||++|+..++.+. ..| .+||+.+..|++
T Consensus 48 r~~~pt~~~le~~la~l~g~---~~~~~~~sG~~ai~~~~~ll------~~G----------------d~Vl~~~~~y~~ 102 (366)
T PRK08247 48 RTGNPTRGVLEQAIADLEGG---DQGFACSSGMAAIQLVMSLF------RSG----------------DELIVSSDLYGG 102 (366)
T ss_pred CCCCchHHHHHHHHHHHhCC---CcEEEEcCHHHHHHHHHHHh------CCC----------------CEEEEecCCcCc
Confidence 34567789999999999874 56788999999998776433 122 378888888887
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
......... . ..|.. ...++ ..|
T Consensus 103 t~~~~~~~~--~------------~~G~~-------------v~~vd--------------~~d---------------- 125 (366)
T PRK08247 103 TYRLFEEHW--K------------KWNVR-------------FVYVN--------------TAS---------------- 125 (366)
T ss_pred HHHHHHHHh--h------------ccCce-------------EEEEC--------------CCC----------------
Confidence 321100000 0 00000 00000 111
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-CcccCCccchhcc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GFWRLGVETTADL 677 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-GfGRtG~~~a~e~ 677 (818)
.+.+++.+. +++.+|++|.. .+..| +...+++|.++|++||+++|+||++. ++ .+..
T Consensus 126 --~~~l~~~i~--------~~tklv~le~P-~NP~~----~~~dl~~I~~la~~~g~~lIvD~t~~~~~--~~~p----- 183 (366)
T PRK08247 126 --LKAIEQAIT--------PNTKAIFIETP-TNPLM----QETDIAAIAKIAKKHGLLLIVDNTFYTPV--LQRP----- 183 (366)
T ss_pred --HHHHHHhcc--------cCceEEEEECC-CCCCC----cHHHHHHHHHHHHHcCCEEEEECCCcccc--ccCc-----
Confidence 144555553 25678888875 44333 55669999999999999999999983 22 1111
Q ss_pred cCCCCcEE--EecccccCC-ccccceeecc-hHHHhhccCC------h--H---------------HHH------HHHHH
Q 003466 678 LGCVPDIA--CYGKLLTGG-VIPLAATLAT-NAVFDSFVGD------S--K---------------LWD------LELIQ 724 (818)
Q Consensus 678 ~gv~PDiv--tlgKgLggG-y~PlsAvl~~-~~i~~~l~~~------~--~---------------~~~------~~l~~ 724 (818)
.....|++ .++|.++|. =+-.|+++++ +++++.+... . . .++ ..+.+
T Consensus 184 ~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~ 263 (366)
T PRK08247 184 LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAA 263 (366)
T ss_pred hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 11234665 689999851 1234556665 5555433210 0 0 001 12345
Q ss_pred HHHcCCCeeEEE--eeeeEEEEEEe
Q 003466 725 QISSHRTVQRVV--ALGTLCAIELQ 747 (818)
Q Consensus 725 ~l~~~~~v~~vr--g~Gl~~~iel~ 747 (818)
.|+.+|.+..|. +.|.++++++.
T Consensus 264 ~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 264 FLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred HHHhCCCeeEEecCCcCcEEEEEEC
Confidence 567788776543 46889999875
No 273
>PRK06460 hypothetical protein; Provisional
Probab=98.70 E-value=7.6e-07 Score=100.55 Aligned_cols=84 Identities=17% Similarity=0.127 Sum_probs=58.6
Q ss_pred CcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCC-
Q 003466 618 GCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGG- 694 (818)
Q Consensus 618 ~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggG- 694 (818)
.++.+|++|.. ++..|.+.+ +++|.++|++||+++|+||++..+ -... ...++ .|++ +++|.++|.
T Consensus 129 ~~tklV~l~sp-~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~-~~~~---~l~~~--~divv~S~sK~l~G~~ 197 (376)
T PRK06460 129 KRYDVVFVENI-TNPLLRVVD----ITELSKVCKENGSILIVDATFSTP-INQK---PLELG--ADIVVHSASKFLAGHN 197 (376)
T ss_pred CCceEEEEECC-CCCCCcccC----HHHHHHHHHHcCCEEEEECCcCcc-ccCC---hhhcC--CCEEEeecceeccCCC
Confidence 35678999986 788888776 678999999999999999998532 1111 01123 5766 789999741
Q ss_pred ccccceeecchHHHhhcc
Q 003466 695 VIPLAATLATNAVFDSFV 712 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~ 712 (818)
-.-.|.+++++++++.+.
T Consensus 198 ~~~~G~~~~~~~l~~~l~ 215 (376)
T PRK06460 198 DVIAGLAAGYGKLLNVID 215 (376)
T ss_pred CceEEEEecCHHHHHHHH
Confidence 012556788888877653
No 274
>PRK07503 methionine gamma-lyase; Provisional
Probab=98.70 E-value=1e-06 Score=100.41 Aligned_cols=83 Identities=16% Similarity=0.101 Sum_probs=59.0
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccC-Cc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTG-GV 695 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLgg-Gy 695 (818)
++.+|++|.. .+..|.+.+ +++|.++|++||+++|+|+++.. +..+.. .+.-.|++ .++|.++| |-
T Consensus 150 ~tklV~le~p-~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~-~~~~~~-----l~~g~Di~v~S~tK~l~g~gd 218 (403)
T PRK07503 150 KTRMVYFETP-ANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCT-PYLQRP-----LELGADLVVHSATKYLGGHGD 218 (403)
T ss_pred cCcEEEEeCC-CCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcc-cccCCc-----hhhCCCEEEccccccccCCCc
Confidence 5678888875 677787765 89999999999999999999952 222221 22345776 57899986 32
Q ss_pred cccceeecchHHHhhcc
Q 003466 696 IPLAATLATNAVFDSFV 712 (818)
Q Consensus 696 ~PlsAvl~~~~i~~~l~ 712 (818)
.=.|++++++++++.+.
T Consensus 219 ~~gG~v~~~~~l~~~l~ 235 (403)
T PRK07503 219 ITAGLVVGGKALADRIR 235 (403)
T ss_pred eeEEEEEcCHHHHHHHH
Confidence 33566777888776553
No 275
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=98.70 E-value=1.7e-06 Score=97.67 Aligned_cols=187 Identities=16% Similarity=0.161 Sum_probs=113.1
Q ss_pred HHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCC
Q 003466 419 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGK 498 (818)
Q Consensus 419 p~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~ 498 (818)
++..+|+.+.+..... .+..+...++++.+++..+ .+.+++++||++|...+++.+ . -..|
T Consensus 11 ~~e~~a~~~~~~~~~~----~~~g~~~~~~e~~la~~~g---~~~~v~~~sgt~aL~~~l~al-~---~~pG-------- 71 (376)
T TIGR02379 11 GQELEYIAEAISEGKL----SGDGPFSRRCETWLENRTG---TKKALLTPSCTAALEMAALLL-D---IQPG-------- 71 (376)
T ss_pred HHHHHHHHHHHHcCCc----cCCcHHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHc-C---CCCc--------
Confidence 4557788877765322 1235678899999999887 368999999999998888754 0 1112
Q ss_pred CccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccc
Q 003466 499 DTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDI 578 (818)
Q Consensus 499 ~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~ 578 (818)
..||+...+|.+.. .++...|... ..+++...
T Consensus 72 --------d~Viv~~~t~~~~~-~~~~~~G~~~----------------------------v~vd~d~~----------- 103 (376)
T TIGR02379 72 --------DEVIMPSYTFVSTA-NAFVLRGAKI----------------------------VFVDIRPD----------- 103 (376)
T ss_pred --------CEEEECCCCcHHHH-HHHHHcCCEE----------------------------EEEecCCC-----------
Confidence 36787777776532 2222222110 00110000
Q ss_pred cccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEE
Q 003466 579 TFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVI 658 (818)
Q Consensus 579 ~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI 658 (818)
+++ + | .+.+++.+. .++.+|+ |+ .. .|...+ +++|.++|++||+++|
T Consensus 104 ~~~-~--------d--------~~~le~~i~--------~~tk~Ii--p~-~~-~G~~~d----~~~I~~la~~~~i~vI 150 (376)
T TIGR02379 104 TMN-I--------D--------ETLIESAIT--------HRTKAIV--PV-HY-AGVACD----MDTIMALANKHQLFVI 150 (376)
T ss_pred cCC-C--------C--------HHHHHHhcC--------cCceEEE--Ee-CC-CCCccC----HHHHHHHHHHCCCEEE
Confidence 000 0 0 144565553 2455665 54 33 455444 7899999999999999
Q ss_pred EeecccCcccCCccchhcccCCCCcEEEec----ccccCCccccceeecc-hHHHhh
Q 003466 659 FDEVFTGFWRLGVETTADLLGCVPDIACYG----KLLTGGVIPLAATLAT-NAVFDS 710 (818)
Q Consensus 659 ~DEV~TGfGRtG~~~a~e~~gv~PDivtlg----KgLggGy~PlsAvl~~-~~i~~~ 710 (818)
.|++| ++|.. +.-...|..-|+.+|| |.++.| ...|++++. +++++.
T Consensus 151 eDaa~-~~g~~---~~~~~~g~~~~~~~fSf~~~K~l~~g-~~gG~v~~~~~~~~~~ 202 (376)
T TIGR02379 151 EDAAQ-GVMST---YKGRALGSIGHLGTFSFHETKNYTSG-GEGGALLINDQAFIER 202 (376)
T ss_pred EECcc-ccCCc---cCCcccCCCCCEEEEeCCCCCcCccc-CCceEEEECCHHHHHH
Confidence 99999 45432 1112334455899999 999866 467777775 566553
No 276
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.70 E-value=1.9e-06 Score=105.53 Aligned_cols=279 Identities=11% Similarity=0.062 Sum_probs=164.3
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCcc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTL 521 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~ 521 (818)
.+...++.++|++++|-+ ...++.++|+.|+-+++.++ |.|...+|+ . ++.+|....+-||+-.
T Consensus 529 lq~i~elq~~l~eltGmd--~~Sl~p~aGA~gE~agL~ai-R~y~~~rge------------~-~R~~vlip~saHgtnP 592 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFD--AISLQPNSGAQGEYAGLRVI-RSYHESRGE------------N-HRNICLIPVSAHGTNP 592 (939)
T ss_pred HHHHHHHHHHHHHHHCCC--CcccCCchHHHHHHHHHHHH-HHHHHhcCC------------C-CCCEEEEEccccCcCH
Confidence 356678999999999843 34567788888888888888 666655543 2 3467788889999875
Q ss_pred ccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHH
Q 003466 522 GAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYS 601 (818)
Q Consensus 522 ~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~ 601 (818)
.+....|.+. +.+|..- -..+ | .
T Consensus 593 asa~~~G~~V------------------------------v~V~~d~-----------~G~i--------D--------l 615 (939)
T TIGR00461 593 ASAAMAGMQV------------------------------VPVNCDQ-----------DGNI--------D--------L 615 (939)
T ss_pred HHHHHCCCEE------------------------------EEeccCC-----------CCCc--------C--------H
Confidence 5544443221 0111000 0000 0 2
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccC-cccCCccchhcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTG-FWRLGVETTADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TG-fGRtG~~~a~e~~gv 680 (818)
+.|++.+. .+++++++|++--. .. .|.+.++ +++|.++|+++|..+++|=++.. .+.. ...-..
T Consensus 616 e~L~~~i~-----~~~~~taaV~iT~p-st-~G~~e~~---I~eI~~iah~~G~~v~VDgAq~~al~~l-----~~Pg~~ 680 (939)
T TIGR00461 616 VDLKNKAE-----QHGDELAAVMVTYP-ST-HGVFEPT---IQHACDIVHSFGGQVYLDGANMNAQVGL-----TSPGDL 680 (939)
T ss_pred HHHHHHHh-----hcCCceEEEEEEeC-Cc-Cceeccc---HHHHHHHHHHcCCEEEEEecChhhCCCC-----CCcccc
Confidence 56777776 33467888877543 34 4555543 89999999999999999988853 2111 011123
Q ss_pred CCcEEEe--ccccc-----CCccccceeecchHHHhhccCC---------hH-----------------------HHH--
Q 003466 681 VPDIACY--GKLLT-----GGVIPLAATLATNAVFDSFVGD---------SK-----------------------LWD-- 719 (818)
Q Consensus 681 ~PDivtl--gKgLg-----gGy~PlsAvl~~~~i~~~l~~~---------~~-----------------------~~~-- 719 (818)
-.|++++ .|.|+ || -=+|.+++++.+...+-+. ++ ++.
T Consensus 681 GaDi~~~s~HKtf~~P~G~GG-Pg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~l 759 (939)
T TIGR00461 681 GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMM 759 (939)
T ss_pred CCCEEEecCCccCCCCCCCCC-CCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHH
Confidence 4699887 49777 44 2345566665543322100 00 000
Q ss_pred ----------------HHHHHHHHcCCCeeEEEeeee-E--EEEEEecCcccCCCchHHHHHHHHHHHhCCceEee----
Q 003466 720 ----------------LELIQQISSHRTVQRVVALGT-L--CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP---- 776 (818)
Q Consensus 720 ----------------~~l~~~l~~~~~v~~vrg~Gl-~--~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p---- 776 (818)
+-+.++|.++..+......|. + +.+++...+. .....+.+++++|.+.|++...
T Consensus 760 G~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~~~~~~~hEfv~~~~~~~~---~~g~~~~dIakrL~d~G~hapt~~~p 836 (939)
T TIGR00461 760 GNEGLPKASVVAILNANYMATRLKDHYPILFVGTLKHVAHECILDLRPLKA---KTGIEAIDVAKRLQDYGFHAPTLSFP 836 (939)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCcccccCCCCceeEEEEEeccchhh---hcCCCHHHHHHHHHhCCeeccccCCc
Confidence 112233433322211101112 1 2222221100 0012367899999999998743
Q ss_pred cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhH
Q 003466 777 LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVE 812 (818)
Q Consensus 777 ~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~ 812 (818)
....+.+.|+-..|++|||++++++.+.-++++++.
T Consensus 837 v~g~lmiepTE~eskeelD~f~~al~~I~~e~~~~~ 872 (939)
T TIGR00461 837 VPGTLMVEPTESESLEELDRFCDAMIAIKEEINALV 872 (939)
T ss_pred cCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 224888999999999999999999999988887743
No 277
>PRK07582 cystathionine gamma-lyase; Validated
Probab=98.69 E-value=1.6e-06 Score=97.48 Aligned_cols=160 Identities=16% Similarity=0.168 Sum_probs=97.7
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-CcccCCccchhcccCCCCcEE--EecccccC--
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GFWRLGVETTADLLGCVPDIA--CYGKLLTG-- 693 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-GfGRtG~~~a~e~~gv~PDiv--tlgKgLgg-- 693 (818)
++..|++|.. .+..|.+.+ +++|.++|+++|+++|+||++. .+|. .-....+|++ .++|.|+|
T Consensus 132 ~t~lV~le~p-~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~~~~-------~p~~~g~Divv~S~sK~l~G~~ 199 (366)
T PRK07582 132 GADLVLAETP-SNPGLDVCD----LAALAAAAHAAGALLVVDNTTATPLGQ-------RPLELGADLVVASDTKALTGHS 199 (366)
T ss_pred CceEEEEECC-CCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCcccc-------CchhcCCcEEEecccccccCCC
Confidence 4567888875 666675554 8999999999999999999983 3321 1112335776 68899976
Q ss_pred Cccccceeecc-hHHHhhccCCh--------H---------------HHH------HHHHHHHHcCCCeeEEE-------
Q 003466 694 GVIPLAATLAT-NAVFDSFVGDS--------K---------------LWD------LELIQQISSHRTVQRVV------- 736 (818)
Q Consensus 694 Gy~PlsAvl~~-~~i~~~l~~~~--------~---------------~~~------~~l~~~l~~~~~v~~vr------- 736 (818)
| +.+|+++++ +++++.+.... . .++ ..+.+.|+++|.|..|.
T Consensus 200 g-~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~ 278 (366)
T PRK07582 200 D-LLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGD 278 (366)
T ss_pred C-eeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCC
Confidence 4 346667764 66665443110 0 111 23445567888776665
Q ss_pred -----------eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEee--------------------cCCEEEEEC
Q 003466 737 -----------ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRP--------------------LGNVIYLMC 785 (818)
Q Consensus 737 -----------g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p--------------------~g~~ir~~p 785 (818)
|.|.++.|++.+. +.+.++. ...+++... ..+.||++.
T Consensus 279 p~~~~~~~~~~~~gg~~s~~~~~~--------~~~~~~~---~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~sv 347 (366)
T PRK07582 279 PAHEVAARQMRRFGGLVSFELADA--------AAAERFV---AASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSC 347 (366)
T ss_pred ccHHHHHhhCCCCcceEEEEeCCH--------HHHHHHH---HhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEe
Confidence 5788999999522 2232222 233444320 125789988
Q ss_pred CCCChHHHHHHHHHHHH
Q 003466 786 GPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 786 pl~~t~edId~~~~~l~ 802 (818)
-+-..++.|+.+.++|+
T Consensus 348 GlE~~~dli~dl~~al~ 364 (366)
T PRK07582 348 GIEDTDDLVADLERALD 364 (366)
T ss_pred ccCCHHHHHHHHHHHHh
Confidence 87666555555555543
No 278
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=98.69 E-value=3e-06 Score=95.63 Aligned_cols=187 Identities=11% Similarity=0.035 Sum_probs=106.8
Q ss_pred HHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCC
Q 003466 419 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGK 498 (818)
Q Consensus 419 p~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~ 498 (818)
++-.+++.+.+..... ...+...+|.+.++++++. +.+++++||++|+..+++.. . -..|
T Consensus 10 ~~~~~~v~~~~~~~~~-----~~g~~~~~le~~la~~~g~---~~~v~~~sgt~al~~~l~al-~---~~~G-------- 69 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL-----TQGPTVPAFEEALAEYVGA---KYAVAFNSATSALHIACLAL-G---VGPG-------- 69 (380)
T ss_pred HHHHHHHHHHHhcCCc-----cCChhHHHHHHHHHHHHCC---CeEEEEcCHHHHHHHHHHHc-C---CCCC--------
Confidence 4457777777765321 1235568899999999874 46677789999999999865 1 0112
Q ss_pred CccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecC-cchhhhhcccccc
Q 003466 499 DTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSL-PEWLYSKIVEHKD 577 (818)
Q Consensus 499 ~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~-P~~~~~~~~~~~~ 577 (818)
..||+....|++.. .++...|... ..+++ |+.+
T Consensus 70 --------d~Viv~~~~~~~~~-~~~~~~G~~~----------------------------~~~~~~~~~~--------- 103 (380)
T TIGR03588 70 --------DRVWTTPITFVATA-NCALYCGAKV----------------------------DFVDIDPDTG--------- 103 (380)
T ss_pred --------CEEEeCCcchHHHH-HHHHHcCCEE----------------------------EEEecCCCcC---------
Confidence 36777777776542 2222222110 00000 0000
Q ss_pred ccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcE
Q 003466 578 ITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPV 657 (818)
Q Consensus 578 ~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilL 657 (818)
..| .+.+++.+.+. ...++.+|++ + . ..|...+ +++|.++|++||+++
T Consensus 104 --~~d------------------~~~l~~~i~~~----~~~~t~~v~~--~-~-~~G~~~~----~~~i~~l~~~~~~~l 151 (380)
T TIGR03588 104 --NID------------------EDALEKKLAAA----KGKLPKAIVP--V-D-FAGKSVD----MQAIAALAKKHGLKI 151 (380)
T ss_pred --CcC------------------HHHHHHHhhcc----cCCCceEEEE--e-C-CCCccCC----HHHHHHHHHHcCCEE
Confidence 011 25566666521 1134556552 2 2 2354443 899999999999999
Q ss_pred EEeecccCcccCCccchhcccCC--CCcEEEec----ccccCCccccceeecc-hHHHh
Q 003466 658 IFDEVFTGFWRLGVETTADLLGC--VPDIACYG----KLLTGGVIPLAATLAT-NAVFD 709 (818)
Q Consensus 658 I~DEV~TGfGRtG~~~a~e~~gv--~PDivtlg----KgLggGy~PlsAvl~~-~~i~~ 709 (818)
|.|++|+ +|-+ +.-...|. --|+.++| |.++.| ..|+++.. +++.+
T Consensus 152 I~D~a~a-~g~~---~~~~~~g~~~~~d~~~~S~~~~K~~~~~--~GG~v~~~~~~~~~ 204 (380)
T TIGR03588 152 IEDASHA-LGAE---YGGKPVGNCRYADATVFSFHPVKIITTA--EGGAVTTNDEELAE 204 (380)
T ss_pred EEECCCc-ccCc---cCCEeCCCccccceEEEecCCCCccccc--CceEEEECCHHHHH
Confidence 9999995 4321 11122343 45999877 888754 34556653 44443
No 279
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=98.69 E-value=3.5e-06 Score=98.55 Aligned_cols=186 Identities=12% Similarity=0.106 Sum_probs=111.3
Q ss_pred CcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchh--cc---cC---CCCcE----E
Q 003466 618 GCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTA--DL---LG---CVPDI----A 685 (818)
Q Consensus 618 ~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~--e~---~g---v~PDi----v 685 (818)
.++.+|++-. .+.-.|.+. +.+-+++|.++|++||+++|.||++..+-..|..+.. +. ++ +.||. .
T Consensus 198 ~~~k~l~l~n-P~NPTG~~~-s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~ 275 (496)
T PLN02376 198 KKVKGLILTN-PSNPLGTML-DKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVY 275 (496)
T ss_pred CCeeEEEEcC-CCCCCCccC-CHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEE
Confidence 3566555443 277788766 8899999999999999999999999876333432211 11 11 23452 3
Q ss_pred Eeccccc-CCccccceeec-chHHHhhccC------ChH-------------HH-HH--------------HHHHHHHcC
Q 003466 686 CYGKLLT-GGVIPLAATLA-TNAVFDSFVG------DSK-------------LW-DL--------------ELIQQISSH 729 (818)
Q Consensus 686 tlgKgLg-gGy~PlsAvl~-~~~i~~~l~~------~~~-------------~~-~~--------------~l~~~l~~~ 729 (818)
+|||.+| .| +-+|.+++ .+.+.+.+.. .+. .+ .+ .+.+.++++
T Consensus 276 S~SK~~glpG-lRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~ 354 (496)
T PLN02376 276 SLSKDMGLPG-FRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA 354 (496)
T ss_pred eccccCCCCc-ceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7999997 77 79999998 4555443211 010 11 10 112233333
Q ss_pred CCeeEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHHh-CCceEeec-------CCEEEEECCCCChHHHHHHHHHH
Q 003466 730 RTVQRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLRE-DGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLK 800 (818)
Q Consensus 730 ~~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e-~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~ 800 (818)
+ +..+. ..|+++-+++...... .........+++.+++ .||.+.|+ .+.+|++... .+++++++.+++
T Consensus 355 g-i~~~~~~aG~flwi~l~~~~~~-~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~r 431 (496)
T PLN02376 355 D-IACLTSNAGLFAWMDLRHLLRD-RNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGR 431 (496)
T ss_pred C-CcccCCCceEEEEEEchhhhcc-CCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHH
Confidence 2 22222 3456666666432100 0011123567888876 59999983 2467777653 567999999999
Q ss_pred HHHHHHHHH
Q 003466 801 LYQRLEEFD 809 (818)
Q Consensus 801 l~~~l~~l~ 809 (818)
|.+++.+..
T Consensus 432 l~~~l~~~~ 440 (496)
T PLN02376 432 IQDFVSKNK 440 (496)
T ss_pred HHHHHHHhh
Confidence 999986543
No 280
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=98.68 E-value=4.5e-06 Score=96.40 Aligned_cols=185 Identities=12% Similarity=0.125 Sum_probs=111.0
Q ss_pred CCcEEEEEE-ccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchh--c---ccCC-C-Cc-E---
Q 003466 617 SGCIGALII-EPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTA--D---LLGC-V-PD-I--- 684 (818)
Q Consensus 617 ~~~iAAVIv-EPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~--e---~~gv-~-PD-i--- 684 (818)
+.++.++++ .| ++-.|... +++.+++|.++|++|++.+|.||++..+--.+..|.+ + ..+. . ++ +
T Consensus 198 ~~~vk~lll~nP--~NPtG~~~-s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi 274 (447)
T PLN02607 198 NIRVRGVLITNP--SNPLGATV-QRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIV 274 (447)
T ss_pred CCCeeEEEEeCC--CCCcCccc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEE
Confidence 346665555 45 66677755 7999999999999999999999999763111111211 1 1121 1 34 2
Q ss_pred EEeccccc-CCccccceeec-chHHHhhccCC------hH------------------HHH---H-------HHHHHHHc
Q 003466 685 ACYGKLLT-GGVIPLAATLA-TNAVFDSFVGD------SK------------------LWD---L-------ELIQQISS 728 (818)
Q Consensus 685 vtlgKgLg-gGy~PlsAvl~-~~~i~~~l~~~------~~------------------~~~---~-------~l~~~l~~ 728 (818)
..|||.+| .| +-+|++++ ++++.+.+... +. .+. + .+.+.|++
T Consensus 275 ~s~SK~fg~~G-lRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~ 353 (447)
T PLN02607 275 YSLSKDLGLPG-FRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRR 353 (447)
T ss_pred EcchhcCCCCc-ceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 37999998 78 79999887 56665433211 11 000 0 12233444
Q ss_pred CCCeeEEEe-eeeEEEEEEecCcccCCCchHHHHHHHHHHHh-CCceEeec-------CCEEEEECCCCChHHHHHHHHH
Q 003466 729 HRTVQRVVA-LGTLCAIELQAAGCNAGYGSLYAASLLKKLRE-DGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLL 799 (818)
Q Consensus 729 ~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e-~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~ 799 (818)
++ +..+.. .|+++-+++...- ..+.......+++++++ +||++.|+ .+.+|++... .+++++++.++
T Consensus 354 ~g-i~~~~~~ag~fvw~~L~~~~--~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~ 429 (447)
T PLN02607 354 AG-IECLKGNAGLFCWMNLSPLL--ETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALK 429 (447)
T ss_pred CC-CCcccCCeeEEEEEEchHhh--cCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHH
Confidence 43 222333 4667767764210 00111223467777765 69999873 1466666543 46899999999
Q ss_pred HHHHHHHHHH
Q 003466 800 KLYQRLEEFD 809 (818)
Q Consensus 800 ~l~~~l~~l~ 809 (818)
+|.+++++-+
T Consensus 430 Ri~~~l~~~~ 439 (447)
T PLN02607 430 RIHRFMDRRK 439 (447)
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 281
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=98.68 E-value=5.2e-06 Score=94.49 Aligned_cols=178 Identities=12% Similarity=0.119 Sum_probs=102.1
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc-chhcccCCCCcEE---Eeccccc-CCc
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-TTADLLGCVPDIA---CYGKLLT-GGV 695 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-~a~e~~gv~PDiv---tlgKgLg-gGy 695 (818)
..+++-| +...|... +.+-+++|.++|+++|+++|.||++..|-..+.. .....+.-.+.++ +|||.++ .|
T Consensus 172 ~v~i~~p--~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG- 247 (403)
T TIGR01265 172 AIVVINP--SNPCGSVF-SRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPG- 247 (403)
T ss_pred EEEEecC--CCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCc-
Confidence 3444555 56677655 7888999999999999999999999877444432 1222221112233 7999854 46
Q ss_pred cccceeecch--H-----HHhhcc-------CChH--------HHH------------------HHHHHHHHcCCCeeEE
Q 003466 696 IPLAATLATN--A-----VFDSFV-------GDSK--------LWD------------------LELIQQISSHRTVQRV 735 (818)
Q Consensus 696 ~PlsAvl~~~--~-----i~~~l~-------~~~~--------~~~------------------~~l~~~l~~~~~v~~v 735 (818)
+-+|.+++.. + +.+.+. .... .+. +.+.+.++.++.+..+
T Consensus 248 lRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 327 (403)
T TIGR01265 248 WRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCP 327 (403)
T ss_pred ceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 6888888731 1 222211 0000 111 1123334444433322
Q ss_pred Ee-eeeEEEEEEecCcccCCCchHHHHHHHHHH-HhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 736 VA-LGTLCAIELQAAGCNAGYGSLYAASLLKKL-REDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 736 rg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l-~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
.. .|.++-+++..... ........++..| .++||.+.|+ .+.+|++.. ..++.+++.+++|.+.+++
T Consensus 328 ~p~~g~f~~~~~~~~~~---~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 328 KPEGAMYLMVKLELELF---PEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITIT--VPESMLEEACSRIKEFCER 401 (403)
T ss_pred CCCceeEEEEecccccc---CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 33 35555555542210 0001244677775 5789999873 257787765 4578899999998887754
No 282
>PRK05839 hypothetical protein; Provisional
Probab=98.68 E-value=8.6e-06 Score=91.78 Aligned_cols=298 Identities=10% Similarity=0.028 Sum_probs=165.8
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIAL 478 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~AL 478 (818)
.+||+..|.. .++- .+.+.+++.+.......+....+..+....+++.+.+..+.+ .-+.+++++++.+|...++
T Consensus 25 ~~i~l~~~~p--~~~~--~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~ 100 (374)
T PRK05839 25 KGLDLTIGEP--QFET--PKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFP 100 (374)
T ss_pred CeEEcCCCCC--CCCC--CHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 7888887643 3442 578888888766543333322344466777888887754421 1357999888888887776
Q ss_pred HHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCc
Q 003466 479 KMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNS 558 (818)
Q Consensus 479 klA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~ 558 (818)
++.. . ... ...|++..-+|.+....+ ...|..
T Consensus 101 ~~~~--~-~~~----------------gd~vlv~~P~y~~~~~~~-~~~g~~---------------------------- 132 (374)
T PRK05839 101 QFVL--F-DKQ----------------NPTIAYPNPFYQIYEGAA-IASRAK---------------------------- 132 (374)
T ss_pred HHHh--c-CCC----------------CCEEEECCCCchhhHHHH-HhcCCE----------------------------
Confidence 6541 0 011 135667677776533222 111111
Q ss_pred ceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEE-EEEEccccccCCCccc
Q 003466 559 KWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIG-ALIIEPVVHAAGGMHM 637 (818)
Q Consensus 559 ~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iA-AVIvEPV~~g~gG~~~ 637 (818)
.+++|-.. +..|.. +..+..+. ++. .+|..| ++-.|.+.
T Consensus 133 --v~~v~~~~---------------~~~~~~------------d~~~~~~~---------~~k~v~i~nP--~NPTG~~~ 172 (374)
T PRK05839 133 --VLLMPLTK---------------ENDFTP------------SLNEKELQ---------EVDLVILNSP--NNPTGRTL 172 (374)
T ss_pred --EEEeeccc---------------ccCCcC------------Ccchhhhc---------cccEEEEeCC--CCCcCccc
Confidence 11111000 000000 00001111 233 444555 77788877
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc----CC-C-CcE---EEeccccc-CCccccceeecchHH
Q 003466 638 VDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL----GC-V-PDI---ACYGKLLT-GGVIPLAATLATNAV 707 (818)
Q Consensus 638 ~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~----gv-~-PDi---vtlgKgLg-gGy~PlsAvl~~~~i 707 (818)
+.+.+++|.++|++||+++|.||++..|...+........ +. . +.+ -+|||.++ .| +-+|.+++++++
T Consensus 173 -s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G-lRiG~ii~~~~~ 250 (374)
T PRK05839 173 -SLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG-LRSGFIAGDASI 250 (374)
T ss_pred -CHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc-ceeEEEecCHHH
Confidence 7889999999999999999999999776321222111110 00 1 222 37999865 56 799999999988
Q ss_pred HhhccCCh-------H---------HH---------HHHHH---HHHH-cCCCeeEEEeeeeEEEEEEecCcccCCCchH
Q 003466 708 FDSFVGDS-------K---------LW---------DLELI---QQIS-SHRTVQRVVALGTLCAIELQAAGCNAGYGSL 758 (818)
Q Consensus 708 ~~~l~~~~-------~---------~~---------~~~l~---~~l~-~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~ 758 (818)
++.+.... . .+ .+.+. +.+. ..+ +. .-..|.++-+.+. +
T Consensus 251 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~p~gg~fi~~~~~-~--------- 318 (374)
T PRK05839 251 LKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILG-IT-IPPATFYVWLPVD-N--------- 318 (374)
T ss_pred HHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcC-CC-CCCeeEEEEEeCC-C---------
Confidence 77543210 0 00 01111 1111 111 11 1122444444442 1
Q ss_pred HHHHHHHHHHh-CCceEeec---------CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 759 YAASLLKKLRE-DGVYMRPL---------GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 759 ~a~~~~~~l~e-~Gvlv~p~---------g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
...++++|++ +||.+.|+ .+.+|++.. .+++++.+++++|.+.++
T Consensus 319 -~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 319 -DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred -hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 2457788875 99999972 257888764 468999999999988764
No 283
>PRK07050 cystathionine beta-lyase; Provisional
Probab=98.66 E-value=9.5e-07 Score=100.36 Aligned_cols=171 Identities=15% Similarity=0.123 Sum_probs=105.2
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
.+.++...+|+++|+++.+. +.+++++||++|+..++.... +.| ..||+.+..|.+
T Consensus 61 r~~~pt~~~Le~~lA~l~g~---~~~l~~~sgt~Ai~~~l~al~-----~~G----------------D~Vl~~~~~y~~ 116 (394)
T PRK07050 61 LHATPTSLALAQRLAEIEGG---RHALLQPSGLAAISLVYFGLV-----KAG----------------DDVLIPDNAYGP 116 (394)
T ss_pred CCCCHHHHHHHHHHHHHhCC---CeEEEeccHHHHHHHHHHHHh-----CCC----------------CEEEEecCCccc
Confidence 34577789999999999873 689999999999999997651 233 267777777764
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
.. ..+... .. . .|. ... +-|. .+
T Consensus 117 ~~-~~~~~~-~~--~----------~Gi-------------~v~-----------------~vd~-------~~------ 139 (394)
T PRK07050 117 NR-DHGEWL-AR--D----------FGI-------------TVR-----------------FYDP-------LI------ 139 (394)
T ss_pred HH-HHHHHH-HH--h----------cCe-------------EEE-----------------EECC-------CC------
Confidence 32 111000 00 0 000 000 0000 00
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL 678 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~ 678 (818)
.+.+++.+. .+..+|++|.. .+..| +...+++|.++|+++|+++|+||++. .| ..+.-..+
T Consensus 140 --~~~l~~~i~--------~~tklV~le~p-~Np~~----~~~di~~I~~ia~~~gi~livD~a~a-~~---~~~~~l~~ 200 (394)
T PRK07050 140 --GAGIADLIQ--------PNTRLIWLEAP-GSVTM----EVPDVPAITAAARARGVVTAIDNTYS-AG---LAFKPFEH 200 (394)
T ss_pred --HHHHHHhcC--------CCCeEEEEECC-CCCCc----cHhhHHHHHHHHHHcCCEEEEECCcc-cc---cccCHHHc
Confidence 033555553 34678899875 44443 55669999999999999999999984 22 21111122
Q ss_pred CCCCcEE--EecccccCCc-cccceeec-chHHHhhc
Q 003466 679 GCVPDIA--CYGKLLTGGV-IPLAATLA-TNAVFDSF 711 (818)
Q Consensus 679 gv~PDiv--tlgKgLggGy-~PlsAvl~-~~~i~~~l 711 (818)
| .|++ .++|.++||- .+.|++++ ++++++.+
T Consensus 201 G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~ 235 (394)
T PRK07050 201 G--VDISVQALTKYQSGGSDVLMGATITADAELHAKL 235 (394)
T ss_pred C--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHH
Confidence 4 4776 5899997542 46787776 56666544
No 284
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=98.66 E-value=3.3e-06 Score=94.97 Aligned_cols=290 Identities=12% Similarity=0.117 Sum_probs=159.5
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALK 479 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALk 479 (818)
.+||+..+. +.+| - .|++.+|+.+....+..+. ...-.+|.+.+++.++-. -+.++++++++++...++.
T Consensus 37 ~~i~l~~~~--~~~~-~-~~~~~~al~~~~~~~~~Y~-----~~~g~~lr~~ia~~~~~~-~~~i~~t~G~~~~l~~~~~ 106 (371)
T PRK05166 37 RIAKLGSNE--NPLG-P-SPAVRRAFADIAELLRLYP-----DPQGRALREAIAARTGVP-ADRIILGNGSEDLIAVICR 106 (371)
T ss_pred ceEEcCCCC--CCCC-C-CHHHHHHHHHHHHHhhcCC-----CCcHHHHHHHHHHHhCcC-HHHEEEcCCHHHHHHHHHH
Confidence 678887642 3344 3 6789988887544432221 111125667777766532 3589999988888877776
Q ss_pred HHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcc
Q 003466 480 MAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSK 559 (818)
Q Consensus 480 lA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~ 559 (818)
... +.| ..|+...-+|.+.. ......|..
T Consensus 107 ~~~-----~~g----------------d~vli~~P~y~~~~-~~~~~~g~~----------------------------- 135 (371)
T PRK05166 107 AVL-----RPG----------------DRVVTLYPSFPLHE-DYPTMMGAR----------------------------- 135 (371)
T ss_pred Hhc-----CCC----------------CEEEEcCCChHHHH-HHHHHcCCe-----------------------------
Confidence 541 222 25677666665422 111111111
Q ss_pred eeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCC
Q 003466 560 WILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVD 639 (818)
Q Consensus 560 ~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p 639 (818)
.+.+|... + +. + + .+.+++.+.. ..++ .++..| ++-.|.+. +
T Consensus 136 -~~~v~~~~--------~--~~-----~----~--------~~~l~~~~~~------~~~~-v~l~~p--~NPtG~~~-~ 177 (371)
T PRK05166 136 -VERVTVTP--------D--LG-----F----D--------LDALCAAVAR------APRM-LMFSNP--SNPVGSWL-T 177 (371)
T ss_pred -EEEeecCC--------C--CC-----C----C--------HHHHHHhhhc------CCCE-EEEeCC--CCCCCCCC-C
Confidence 00111000 0 00 0 0 1445555541 1122 344555 67788877 6
Q ss_pred HHHHHHHHHHHHhcCCcEEEeecccCcccCCc-c-chhccc-CCCCcEE---Eeccccc-CCccccceeec-chHHHhhc
Q 003466 640 PLFQRILVKECQNRKIPVIFDEVFTGFWRLGV-E-TTADLL-GCVPDIA---CYGKLLT-GGVIPLAATLA-TNAVFDSF 711 (818)
Q Consensus 640 ~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~-~-~a~e~~-gv~PDiv---tlgKgLg-gGy~PlsAvl~-~~~i~~~l 711 (818)
.+.+++|.++|++ ++++|+||++.-|- .+. . .....+ ...+.++ +|||.+| .| +.+|.+++ ++++++.+
T Consensus 178 ~~~~~~l~~~~~~-~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~G-lRiG~~i~~~~~l~~~~ 254 (371)
T PRK05166 178 ADQLARVLDATPP-ETLIVVDEAYAEYA-AGDDYPSALTLLKARGLPWIVLRTFSKAYGLAG-LRVGYGLVSDPELVGLL 254 (371)
T ss_pred HHHHHHHHHhCCC-CcEEEEECcHHHhc-CCcCcccHHHHHhhcCCCEEEEeechHhhhcch-hheeeeecCCHHHHHHH
Confidence 7778888888865 88999999987663 221 1 111111 1122333 6999998 78 79999765 67776654
Q ss_pred cCCh------H--------------HHH----------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHH
Q 003466 712 VGDS------K--------------LWD----------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAA 761 (818)
Q Consensus 712 ~~~~------~--------------~~~----------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~ 761 (818)
.... . .++ +.+.+.|+.++. .-....|.++-+.+.. .+.
T Consensus 255 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~p~~g~fl~~~~~~----------~~~ 323 (371)
T PRK05166 255 DRVRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMGY-RIAPSRANFLFFDARR----------PAS 323 (371)
T ss_pred HHhccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCcC-eeCCCcCCEEEEeCCC----------CHH
Confidence 2110 0 000 123344555532 2123345554443321 145
Q ss_pred HHHHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 762 SLLKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 762 ~~~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
.+++.|.++||++.|. .+.+|+... ++++.++++++|+..+
T Consensus 324 ~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 324 AVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 6888999999999874 256888775 4667777777776653
No 285
>PLN02509 cystathionine beta-lyase
Probab=98.66 E-value=6.1e-07 Score=103.62 Aligned_cols=64 Identities=16% Similarity=0.053 Sum_probs=47.8
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccC
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTG 693 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLgg 693 (818)
+..+|++|.. .+..|.+. .+++|.++|++||+++|+||++ +.+-.+.. .+.-.|++ .+.|.|+|
T Consensus 217 ~TklV~lesP-sNPtG~i~----Dl~~I~~lAk~~g~~lIVD~A~-a~~~~~~p-----l~~gaDivv~S~tK~l~G 282 (464)
T PLN02509 217 QTKLVWLESP-TNPRQQIS----DIRKIAEMAHAQGALVLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAG 282 (464)
T ss_pred CCeEEEEECC-CCCCCCHH----HHHHHHHHHHHcCCEEEEECCc-cccccCCh-----hhcCCcEEEecCcccccC
Confidence 5678999987 67777654 4999999999999999999998 33333332 22346876 57899986
No 286
>PTZ00377 alanine aminotransferase; Provisional
Probab=98.66 E-value=5.1e-06 Score=96.87 Aligned_cols=310 Identities=14% Similarity=0.062 Sum_probs=167.3
Q ss_pred CHHHHHHHHHhhhhcc----cccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhccccc
Q 003466 418 QIELARDMGYTAARFG----HVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVL 492 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~----~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~ 492 (818)
...+.+++.+.++... .+....+..+....+++.+....+.. ..+.|++++++++|+..+++... ...|
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~----~~~g-- 163 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLI----GDPS-- 163 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhc----cCCC--
Confidence 4577788776555432 12222344556677777776542211 12589999999999999998661 1222
Q ss_pred ccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhc
Q 003466 493 VDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKI 572 (818)
Q Consensus 493 ~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~ 572 (818)
..|++..-+|.+....+ ...|.. .+.+|-..
T Consensus 164 --------------D~Vlv~~P~y~~y~~~~-~~~g~~------------------------------~v~v~~~~---- 194 (481)
T PTZ00377 164 --------------DGVMIPIPQYPLYSAAI-TLLGGK------------------------------QVPYYLDE---- 194 (481)
T ss_pred --------------CEEEECCCCchhHHHHH-HHcCCE------------------------------EEEEEecc----
Confidence 25777777777643221 111111 01111000
Q ss_pred cccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEE-EEEEccccccCCCcccCCHHHHHHHHHHHH
Q 003466 573 VEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIG-ALIIEPVVHAAGGMHMVDPLFQRILVKECQ 651 (818)
Q Consensus 573 ~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iA-AVIvEPV~~g~gG~~~~p~~fl~~LreLc~ 651 (818)
+ + .|. -+ .+.+++.+.... ....++. .+++-| ++-.|.+. +.+-+++|.++|+
T Consensus 195 ----~---~----~~~--~d--------~~~l~~~l~~~~--~~~~~~k~l~l~~P--~NPTG~~~-s~e~~~~i~~~a~ 248 (481)
T PTZ00377 195 ----E---K----GWS--LD--------QEELEEAYEQAV--RNGITPRALVVINP--GNPTGQVL-TRDVMEEIIKFCY 248 (481)
T ss_pred ----c---c----CCC--CC--------HHHHHHHHHHHH--hcCCCeeEEEEECC--CCCCCcCC-CHHHHHHHHHHHH
Confidence 0 0 000 00 145555554210 1122454 455666 67788876 8999999999999
Q ss_pred hcCCcEEEeecccCcccCC-ccc-hh-c-ccCCCCc------EE---Eeccccc--CCccccceeec---chHHHhhccC
Q 003466 652 NRKIPVIFDEVFTGFWRLG-VET-TA-D-LLGCVPD------IA---CYGKLLT--GGVIPLAATLA---TNAVFDSFVG 713 (818)
Q Consensus 652 ~~gilLI~DEV~TGfGRtG-~~~-a~-e-~~gv~PD------iv---tlgKgLg--gGy~PlsAvl~---~~~i~~~l~~ 713 (818)
+||+++|.||++..+--.+ ..+ .. . ..+..++ ++ .|||++. .| +-+|.+++ ++++++.+..
T Consensus 249 ~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~G-lRiG~~~~~~~p~~li~~l~~ 327 (481)
T PTZ00377 249 EKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECG-RRGGYFELTNIPPEVREQIYK 327 (481)
T ss_pred HCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCc-CceEEEEEeCCCHHHHHHHHH
Confidence 9999999999997652212 111 11 0 0122221 33 5899864 46 68888875 7777664421
Q ss_pred ChH---------------HH-------------HH--------------HHHHHHHcCCCeeEEEeeeeEEEE-EEecCc
Q 003466 714 DSK---------------LW-------------DL--------------ELIQQISSHRTVQRVVALGTLCAI-ELQAAG 750 (818)
Q Consensus 714 ~~~---------------~~-------------~~--------------~l~~~l~~~~~v~~vrg~Gl~~~i-el~~~~ 750 (818)
... .+ .+ .+.+.|+.++.+.-....|.++.+ .+....
T Consensus 328 ~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~ 407 (481)
T PTZ00377 328 LASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPE 407 (481)
T ss_pred HhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCch
Confidence 100 11 00 012334445444444455544443 332110
Q ss_pred ccCCCc----hHHHHHH-HHHHHhCCceEeec---C-----CEEEEECCCCChHHHHHHHHHHHHHHHHHHHHh
Q 003466 751 CNAGYG----SLYAASL-LKKLREDGVYMRPL---G-----NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKV 811 (818)
Q Consensus 751 ~~~~~~----~~~a~~~-~~~l~e~Gvlv~p~---g-----~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~ 811 (818)
...... ......+ ...|.++||.+.|+ + +.+|++.. .+++++++++++|.+.++++.+.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 408 KAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred hhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 000000 0001223 34556789999873 1 36888765 66889999999999998876544
No 287
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.64 E-value=3.7e-06 Score=95.44 Aligned_cols=220 Identities=13% Similarity=0.072 Sum_probs=120.3
Q ss_pred ceeecccccccccCCCCC-CHHHHHHHHHhhhhcc--cccCCCCCChhHHHHHHHHHhccCCC-CCCcE--EEeCChhHH
Q 003466 400 QQFDACASWWTQGPDATL-QIELARDMGYTAARFG--HVMFPENVYEPALECAELLLQGVGKG-WASRA--YFSDNGSTA 473 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~-hp~V~eAi~~q~~~~~--~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v--~f~~SGseA 473 (818)
..||+..|.-...-++-- .+.+.+|+.+.++... .+....+..+....+++++...-+.. .-+++ +.++++++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 356666554322222220 2678888877664311 12223345566677777775532210 12455 889999999
Q ss_pred HHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcc
Q 003466 474 IEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTV 553 (818)
Q Consensus 474 ~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~ 553 (818)
...++++. ... ..| ..|++-+-+|.+.... ....|...
T Consensus 107 l~~~~~~l-~~~--~pG----------------d~Vlv~~P~y~~~~~~-~~~~g~~~---------------------- 144 (396)
T PRK09257 107 LRVGADFL-KRA--FPD----------------AKVWVSDPTWPNHRAI-FEAAGLEV---------------------- 144 (396)
T ss_pred HHHHHHHH-HHh--CCC----------------CeEEECCCCcccHHHH-HHHcCCcE----------------------
Confidence 99988754 111 223 2688888888774322 22222110
Q ss_pred cccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCC
Q 003466 554 FMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAG 633 (818)
Q Consensus 554 ~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~g 633 (818)
+++|. .+.+ .+. -+ .+.+++.+.. ...+..++++-. .++-.
T Consensus 145 --------v~v~~--------------~~~~-~~~--~d--------~~~l~~~~~~-----~~~~~~~~i~~~-p~NPT 185 (396)
T PRK09257 145 --------KTYPY--------------YDAA-TKG--LD--------FDAMLADLSQ-----APAGDVVLLHGC-CHNPT 185 (396)
T ss_pred --------EEEec--------------cccc-cCc--cC--------HHHHHHHHHh-----CCCCCEEEEeCC-CCCCC
Confidence 11110 0000 000 00 2456666642 122223444333 37888
Q ss_pred CcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccC-Cc-cchh-cccCCCCcE---EEecccccC-Cccccceee
Q 003466 634 GMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRL-GV-ETTA-DLLGCVPDI---ACYGKLLTG-GVIPLAATL 702 (818)
Q Consensus 634 G~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRt-G~-~~a~-e~~gv~PDi---vtlgKgLgg-Gy~PlsAvl 702 (818)
|.+. +.+.+++|.++|++||+++|.||+...|.-. +. .... ...+..+.+ ..|||.++- | +-+|.++
T Consensus 186 G~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~G-lRiG~~~ 259 (396)
T PRK09257 186 GADL-TPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYG-ERVGALS 259 (396)
T ss_pred CCCC-CHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCcccc-ccceeEE
Confidence 8877 8999999999999999999999999887422 11 1111 111112223 379999984 7 6888876
No 288
>PRK07049 methionine gamma-lyase; Validated
Probab=98.64 E-value=1.4e-06 Score=100.03 Aligned_cols=179 Identities=15% Similarity=0.089 Sum_probs=105.7
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
+.++....|+++|+++.+. +.++.++||++|+..++.... ..| ..||+.+..|.|.
T Consensus 80 ~~~Pt~~~Le~~lA~leg~---~~~iv~~sG~~Ai~~~l~al~-----~~G----------------d~Vv~~~p~Y~~~ 135 (427)
T PRK07049 80 FNHPNSEIVEDRLAVYEGA---ESAALFSSGMSAIATTLLAFV-----RPG----------------DVILHSQPLYGGT 135 (427)
T ss_pred CCCcCHHHHHHHHHHHhCC---CcEEEEccHHHHHHHHHHHHh-----CCC----------------CEEEEcCCCcccH
Confidence 4466778999999998873 578889999999888887551 122 2677777788764
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
......... ..| ...+.+|+ ..|
T Consensus 136 ~~~~~~~l~--------------~~G-------------i~~v~~~~-------------~~d----------------- 158 (427)
T PRK07049 136 ETLLAKTFR--------------NFG-------------VGAVGFAD-------------GLS----------------- 158 (427)
T ss_pred HHHHHHHHH--------------hcC-------------cEEEEEeC-------------CCC-----------------
Confidence 321110000 000 00011110 011
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHh---cCCcEEEeecccCcccCCccchhc
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQN---RKIPVIFDEVFTGFWRLGVETTAD 676 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~---~gilLI~DEV~TGfGRtG~~~a~e 676 (818)
.+.+++.+.+. ....++.+|++|.. ++..|.+. +.+-+.+|.+.|.+ +|+++|+||+..++-... ..
T Consensus 159 -~~~l~~~l~~~---~~~~~tklv~lesP-~NPtg~v~-d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~---pl- 228 (427)
T PRK07049 159 -EAAIGAAAEAA---AAKGRVSLILIETP-ANPTNSLV-DVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK---PL- 228 (427)
T ss_pred -HHHHHHHHHhh---ccCCCceEEEEECC-CCCCCccc-CHHHHHHHHHHhhhcccCCCEEEEECCccccccCC---cc-
Confidence 02334444321 11246789999985 88888776 44444444444322 899999999965431111 01
Q ss_pred ccCCCCcEE--EecccccC--CccccceeecchHHHhhcc
Q 003466 677 LLGCVPDIA--CYGKLLTG--GVIPLAATLATNAVFDSFV 712 (818)
Q Consensus 677 ~~gv~PDiv--tlgKgLgg--Gy~PlsAvl~~~~i~~~l~ 712 (818)
.+| .|++ +++|.++| | +-+|++++++++++.+.
T Consensus 229 ~~g--~divv~S~SK~~gG~~g-lr~G~vv~~~~l~~~l~ 265 (427)
T PRK07049 229 EHG--ADLSVYSLTKYVGGHSD-LVAGAVLGRKALIRQVR 265 (427)
T ss_pred ccC--CCEEEEcCceeecCCCC-cEEEEEECCHHHHHHHH
Confidence 123 4766 79999995 5 57888899888877653
No 289
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=98.63 E-value=1.4e-06 Score=98.43 Aligned_cols=142 Identities=13% Similarity=0.085 Sum_probs=85.6
Q ss_pred CcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCCc
Q 003466 618 GCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGGV 695 (818)
Q Consensus 618 ~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggGy 695 (818)
.++.+|++|.. .+..|.+.+ +++|.++|++||+++|+|+++. .+-.... .+.-.|++ ...|.++|.-
T Consensus 130 ~~tklv~le~p-snptg~v~d----l~~I~~la~~~g~~vivD~a~~-~~~~~~~-----l~~g~Di~v~S~tK~l~G~~ 198 (378)
T TIGR01329 130 PKTKLVLLESP-TNPLQKIVD----IRKISEMAHAQNALVVVDNTMM-SPLLCNP-----LELGADIVYHSATKFLAGHS 198 (378)
T ss_pred cCceEEEEECC-CCCCCeeec----HHHHHHHHHHcCCEEEEECCCc-ccccCCh-----hhcCCcEEEEecceeccCCc
Confidence 35779999976 677787775 9999999999999999999983 2221111 12235876 5789887621
Q ss_pred -cccceeecc-hHHHhhcc---C--ChH------------------HHH------HHHHHHHHcCCCeeEE---------
Q 003466 696 -IPLAATLAT-NAVFDSFV---G--DSK------------------LWD------LELIQQISSHRTVQRV--------- 735 (818)
Q Consensus 696 -~PlsAvl~~-~~i~~~l~---~--~~~------------------~~~------~~l~~~l~~~~~v~~v--------- 735 (818)
.=.|+++++ +++.+.+. . +.. .++ ..+.+.|++||.+..|
T Consensus 199 ~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p 278 (378)
T TIGR01329 199 DVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHP 278 (378)
T ss_pred cceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 124555564 44433221 1 100 111 1234445666655433
Q ss_pred ---------EeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecC
Q 003466 736 ---------VALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLG 778 (818)
Q Consensus 736 ---------rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g 778 (818)
.|.|.+++|++. .. ..+..|...|...++-++.+|
T Consensus 279 ~~~l~~~~~~g~~~~~sf~~~-~~-------~~~~~~~~~L~~~~i~~s~G~ 322 (378)
T TIGR01329 279 GFHLHFSQAKGAGSVLSFETG-SV-------ALSKRLVEATKLFSITVSFGS 322 (378)
T ss_pred cHHHHHHhCCCcceEEEEEEC-CH-------HHHHHHHHhCcCcccccCCCC
Confidence 367789999993 31 346678888865565555433
No 290
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=98.63 E-value=1.7e-06 Score=97.57 Aligned_cols=184 Identities=17% Similarity=0.177 Sum_probs=104.7
Q ss_pred HHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCC
Q 003466 420 ELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKD 499 (818)
Q Consensus 420 ~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~ 499 (818)
+-.+++.+.++.... .+..+...+++++|++.++ .+++++++||++|...++..+. -..|
T Consensus 12 ~~~~~~~~~l~~~~~----~g~~~~~~~~e~~la~~~g---~~~~v~~~sgt~al~~~l~~~~----~~~G--------- 71 (375)
T PRK11706 12 TELDYIQQAMSSGKL----CGDGGFTRRCQQWLEQRFG---SAKVLLTPSCTAALEMAALLLD----IQPG--------- 71 (375)
T ss_pred HHHHHHHHHHHcCCc----cCCCHHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHhC----CCCC---------
Confidence 346667766654321 1234667889999999887 3689999999999998887650 1112
Q ss_pred ccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcccccccc
Q 003466 500 TTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDIT 579 (818)
Q Consensus 500 ~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~ 579 (818)
..||+-..+|.+ +..++...|.... +.+. -++.+
T Consensus 72 -------d~Viv~~~t~~~-~~~~~~~~G~~~v--------------~~d~-------------d~~~~----------- 105 (375)
T PRK11706 72 -------DEVIMPSYTFVS-TANAFVLRGAKIV--------------FVDI-------------RPDTM----------- 105 (375)
T ss_pred -------CEEEECCCCcHH-HHHHHHHcCCEEE--------------EEec-------------CCCcC-----------
Confidence 357776666654 3333333332110 0000 00000
Q ss_pred ccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEE
Q 003466 580 FCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIF 659 (818)
Q Consensus 580 ~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~ 659 (818)
..| .+.+++.+. .++.+|++ + +. .|.... +++|.++|++||+++|.
T Consensus 106 ~~d------------------~~~le~~i~--------~~tk~i~~--~-~~-~G~~~~----~~~i~~la~~~~i~vIe 151 (375)
T PRK11706 106 NID------------------ETLIEAAIT--------PKTRAIVP--V-HY-AGVACE----MDTIMALAKKHNLFVVE 151 (375)
T ss_pred CcC------------------HHHHHHhcC--------CCCeEEEE--e-CC-CCCccC----HHHHHHHHHHcCCEEEE
Confidence 011 145666654 23455553 3 22 354433 78999999999999999
Q ss_pred eecccCcccCCccchhcccCCCCcEEEec----ccccCCccccceeec-chHHHh
Q 003466 660 DEVFTGFWRLGVETTADLLGCVPDIACYG----KLLTGGVIPLAATLA-TNAVFD 709 (818)
Q Consensus 660 DEV~TGfGRtG~~~a~e~~gv~PDivtlg----KgLggGy~PlsAvl~-~~~i~~ 709 (818)
|++| ++|..-.. ...|---|+.+|| |.++.|- -|+++. ++++++
T Consensus 152 D~a~-a~g~~~~~---~~~g~~~~~~~~Sf~~~K~l~~g~--gG~~~~~~~~~~~ 200 (375)
T PRK11706 152 DAAQ-GVMSTYKG---RALGTIGHIGCFSFHETKNYTAGE--GGALLINDPALIE 200 (375)
T ss_pred ECcc-ccccccCC---eeeecCcCEEEEeCCCCccccccC--CeEEEECCHHHHH
Confidence 9999 45542110 1122234888988 9996441 233444 466654
No 291
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=98.63 E-value=1.2e-06 Score=99.78 Aligned_cols=79 Identities=18% Similarity=0.152 Sum_probs=55.6
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccC-Cc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTG-GV 695 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLgg-Gy 695 (818)
+..+|++|.. .+..|.+.+ +++|.++|+++|+++|+||++.. +-.... ..+| .|++ .++|.++| |
T Consensus 150 ~tklV~lesp-~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~-~~~~~~---~~~g--aDivv~S~sK~l~g~g- 217 (398)
T PRK07504 150 NTKVFFLESP-TNPTLEVID----IAAVAKIANQAGAKLVVDNVFAT-PLFQKP---LELG--AHIVVYSATKHIDGQG- 217 (398)
T ss_pred CceEEEEECC-CCCCcEecC----HHHHHHHHHHcCCEEEEECCccc-cccCCc---hhhC--CCEEEeeccccccCCc-
Confidence 5678999986 677777775 99999999999999999999852 111111 1223 5776 46899976 4
Q ss_pred cccc-eeecchHHHh
Q 003466 696 IPLA-ATLATNAVFD 709 (818)
Q Consensus 696 ~Pls-Avl~~~~i~~ 709 (818)
..+| +++++++.+.
T Consensus 218 ~~~GG~vv~~~~~i~ 232 (398)
T PRK07504 218 RCLGGVVLSDKAWIE 232 (398)
T ss_pred cceEEEEEeCcHHHH
Confidence 4664 5666666543
No 292
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=98.62 E-value=1.1e-06 Score=98.23 Aligned_cols=159 Identities=21% Similarity=0.326 Sum_probs=99.8
Q ss_pred EEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCccc
Q 003466 622 ALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVIP 697 (818)
Q Consensus 622 AVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~P 697 (818)
.+|..| ++-.|... +.+.+++|.+.|++ ++++|+||++.-|.. .........-.|.++ +|||.+| .| +-
T Consensus 149 v~l~nP--nNPTG~~~-~~~~l~~l~~~~~~-~~~vivDEay~~f~~--~~s~~~~~~~~~n~iv~rSfSK~~glaG-lR 221 (351)
T PRK01688 149 VYVCSP--NNPTGNLI-NPQDLRTLLELTRG-KAIVVADEAYIEFCP--QASLAGWLAEYPHLVILRTLSKAFALAG-LR 221 (351)
T ss_pred EEEeCC--CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECchhhcCC--CCChHHHHhhCCCEEEEecchHhhcCHH-HH
Confidence 455566 67778877 77788888888876 689999999977731 111112222234543 7999988 66 67
Q ss_pred cceeecchHHHhhccCChH--------------HHH------------------HHHHHHHHcCCCeeEEE-eeeeEEEE
Q 003466 698 LAATLATNAVFDSFVGDSK--------------LWD------------------LELIQQISSHRTVQRVV-ALGTLCAI 744 (818)
Q Consensus 698 lsAvl~~~~i~~~l~~~~~--------------~~~------------------~~l~~~l~~~~~v~~vr-g~Gl~~~i 744 (818)
+|.+++++++++.+..... .+. +.+.+.|+.++.+..+. ..|.++-+
T Consensus 222 iGy~i~~~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~ 301 (351)
T PRK01688 222 CGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILA 301 (351)
T ss_pred HhHHhCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEE
Confidence 7889999988776532110 110 12333444454332222 23333333
Q ss_pred EEecCcccCCCchHHHHHHHHHHHhCCceEeec------CCEEEEECCCCChHHHHHHHHHHH
Q 003466 745 ELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL------GNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 745 el~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~------g~~ir~~ppl~~t~edId~~~~~l 801 (818)
.+. + +..+.+.|+++||++++. .+.+|++.. +++|+++++++|
T Consensus 302 ~~~-~----------~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 302 RFT-A----------SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred EcC-C----------HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHHhh
Confidence 332 1 456888999999999863 256888764 689999999877
No 293
>PRK07908 hypothetical protein; Provisional
Probab=98.62 E-value=5.9e-06 Score=92.06 Aligned_cols=162 Identities=17% Similarity=0.192 Sum_probs=99.9
Q ss_pred EEEEEE-ccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CC
Q 003466 620 IGALII-EPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GG 694 (818)
Q Consensus 620 iAAVIv-EPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gG 694 (818)
+.++++ .| ++-.|.+.+ .++|.++|++ ++++|+||++.-| ..|..-.....+. ++++ +|||.++ .|
T Consensus 140 ~~~i~l~np--~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~-~~~~~~~l~~~~~-~~~i~i~S~SK~~~l~G 210 (349)
T PRK07908 140 ADLVVIGNP--TNPTSVLHP----AEQLLALRRP-GRILVVDEAFADA-VPGEPESLAGDDL-PGVLVLRSLTKTWSLAG 210 (349)
T ss_pred CCEEEEcCC--CCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhh-ccCCccccccccC-CCEEEEeecccccCCcc
Confidence 335544 55 788888885 3467888864 7888899999765 2333211111221 3433 6799998 77
Q ss_pred ccccceeecchHHHhhccCCh------H--------H--------H----------HHHHHHHHHcCCCeeEEE-eeeeE
Q 003466 695 VIPLAATLATNAVFDSFVGDS------K--------L--------W----------DLELIQQISSHRTVQRVV-ALGTL 741 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~------~--------~--------~----------~~~l~~~l~~~~~v~~vr-g~Gl~ 741 (818)
+.+|.+++++++++.+.... . . + .+.+.+.++++. +.-.. ..|.+
T Consensus 211 -lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~ 288 (349)
T PRK07908 211 -LRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPF 288 (349)
T ss_pred -ceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceE
Confidence 68999999988877653210 0 0 0 011233444442 22222 23555
Q ss_pred EEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 742 CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 742 ~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+-+.+.. +..+.+.|.++||++.++ .+.+|++. .+++|+++++++|++.+.
T Consensus 289 ~~~~~~~-----------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 289 VLVRVPD-----------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred EEEECCc-----------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 5554431 346778888999999873 26788887 468899999999987654
No 294
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.61 E-value=3.3e-06 Score=93.75 Aligned_cols=160 Identities=13% Similarity=0.165 Sum_probs=99.3
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-h-hcccCCCCcEEEeccccc-CCccc
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-T-ADLLGCVPDIACYGKLLT-GGVIP 697 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a-~e~~gv~PDivtlgKgLg-gGy~P 697 (818)
..++..| ++-.|.... .+ ++.+++ ++++++|.||++.-|. +..+ . .+.+.-.-=+-+|||.++ .| +-
T Consensus 141 ~i~i~nP--~NPTG~~~s-~~---~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~~~~~~~~~vi~~~S~SK~~~l~G-lR 210 (335)
T PRK14808 141 VVFIPNP--NNPTGHVFE-RE---EIERIL-KTGAFVALDEAYYEFH--GESYVDLLKKYENLAVIRTFSKAFSLAA-QR 210 (335)
T ss_pred EEEEeCC--CCCCCCCcC-HH---HHHHHH-hcCCEEEEECchhhhc--CCchHHHHHhCCCEEEEEechhhccCcc-cc
Confidence 3555666 677788774 44 445555 5899999999998773 2211 1 111111111237999999 77 78
Q ss_pred cceeecchHHHhhccCChH--------------H------HH----------HHHHHHHHcCCCeeEEEeeeeEEEEEEe
Q 003466 698 LAATLATNAVFDSFVGDSK--------------L------WD----------LELIQQISSHRTVQRVVALGTLCAIELQ 747 (818)
Q Consensus 698 lsAvl~~~~i~~~l~~~~~--------------~------~~----------~~l~~~l~~~~~v~~vrg~Gl~~~iel~ 747 (818)
+|.+++++++++.+..... . +. +.+.+.++.++ +.-....|.++-+.+.
T Consensus 211 vG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~g~f~~~~l~ 289 (335)
T PRK14808 211 IGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFIFME 289 (335)
T ss_pred eEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCeEEEEeCC
Confidence 9999999998876632110 0 00 11223344443 2222345666656554
Q ss_pred cCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 748 AAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 748 ~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
.. ....+.+.|.++||+++...+.+|++. -+.++.++++++|++
T Consensus 290 ~~---------~~~~~~~~l~~~Gi~V~~~~~~~Risi---~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 290 KE---------EKERLLEHLRAKNIAVRSFREGVRITI---GKREENDMILKELEV 333 (335)
T ss_pred Cc---------cHHHHHHHHHHCCeEEEECCCCeEEec---CCHHHHHHHHHHHHh
Confidence 22 135678899999999998767788875 346888888888764
No 295
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=98.61 E-value=1.5e-06 Score=98.29 Aligned_cols=80 Identities=16% Similarity=0.029 Sum_probs=53.1
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEe--cccccC-Cc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACY--GKLLTG-GV 695 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl--gKgLgg-Gy 695 (818)
++.+|++|.. .+..|.+.+ +++|.++|++||+++|+|++++.. -.+. ..+.-.|++++ .|.++| |-
T Consensus 134 ~t~lV~lesP-~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~-~~~~-----p~~~gaDivv~S~tK~l~g~~d 202 (380)
T PRK06176 134 NTKALYLETP-SNPLLKITD----LAQCASVAKDHGLLTIVDNTFATP-YYQN-----PLLLGADIVVHSGTKYLGGHSD 202 (380)
T ss_pred CceEEEEECC-CCCCceecC----HHHHHHHHHHcCCEEEEECCcccc-ccCC-----ccccCCCEEEecCceeccCCcc
Confidence 5788999875 666777665 889999999999999999998532 1222 12334688765 588875 21
Q ss_pred cccceeecc-hHHHh
Q 003466 696 IPLAATLAT-NAVFD 709 (818)
Q Consensus 696 ~PlsAvl~~-~~i~~ 709 (818)
.=.|+++++ +++++
T Consensus 203 ~~gG~vv~~~~~~~~ 217 (380)
T PRK06176 203 VVAGLVTTNNEALAQ 217 (380)
T ss_pred ceeeEEEecHHHHHH
Confidence 113345553 45544
No 296
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=98.61 E-value=7.4e-06 Score=95.23 Aligned_cols=184 Identities=17% Similarity=0.169 Sum_probs=109.6
Q ss_pred CcEEEEEEc-cccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch--hccc------CC-CCc----
Q 003466 618 GCIGALIIE-PVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT--ADLL------GC-VPD---- 683 (818)
Q Consensus 618 ~~iAAVIvE-PV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a--~e~~------gv-~PD---- 683 (818)
.++.+|++- | ++-.|... +.+.+++|.++|++||+++|.||+...+--.+..+. .... +. .++
T Consensus 190 ~~~k~v~l~nP--~NPTG~~~-s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~ 266 (468)
T PLN02450 190 LKVKGVLITNP--SNPLGTTT-TRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHI 266 (468)
T ss_pred CCeeEEEEecC--CCCCCccc-CHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEE
Confidence 355544444 6 67777766 889999999999999999999999986522332221 1111 11 122
Q ss_pred EEEeccccc-CCccccceeecchH-HHhhccC------ChH--------H----------HH----------HHHHHHHH
Q 003466 684 IACYGKLLT-GGVIPLAATLATNA-VFDSFVG------DSK--------L----------WD----------LELIQQIS 727 (818)
Q Consensus 684 ivtlgKgLg-gGy~PlsAvl~~~~-i~~~l~~------~~~--------~----------~~----------~~l~~~l~ 727 (818)
+-+|||.++ .| +-+|.++++++ +.+.+.. .+. . +. +.+.+.|+
T Consensus 267 l~S~SK~~~l~G-lRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~ 345 (468)
T PLN02450 267 VYSLSKDLGLPG-FRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLE 345 (468)
T ss_pred EEeccccCCCCC-ccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 348999998 78 79999999744 4433211 010 0 00 01223344
Q ss_pred cCCCeeEEEe-eeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHH
Q 003466 728 SHRTVQRVVA-LGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLL 798 (818)
Q Consensus 728 ~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~ 798 (818)
+++. .-+.. .|+++-+.+..... .........+++.|+ ++||.+.|+ .+.+|++... .+++++++.+
T Consensus 346 ~~gi-~~~~~~~g~flwi~l~~~~~--~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l 421 (468)
T PLN02450 346 AAGI-KCLKSNAGLFCWVDMRHLLK--SNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAM 421 (468)
T ss_pred HcCC-cccCCCceEEEEEEchHhcC--cCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHH
Confidence 4432 22222 45565566542110 001122345667766 579999884 2467776654 5689999999
Q ss_pred HHHHHHHHHHH
Q 003466 799 LKLYQRLEEFD 809 (818)
Q Consensus 799 ~~l~~~l~~l~ 809 (818)
++|.+++.+..
T Consensus 422 ~ri~~~l~~~~ 432 (468)
T PLN02450 422 KRLKSFVESDS 432 (468)
T ss_pred HHHHHHHHhcc
Confidence 99999886643
No 297
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=98.60 E-value=1.4e-06 Score=98.70 Aligned_cols=168 Identities=13% Similarity=0.057 Sum_probs=100.7
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +..+.++||++|+..++.... ..| ..||+.+..|.+.
T Consensus 58 ~~~p~~~~Le~~lA~~~g~---~~~i~~~sG~~Ai~~~l~all-----~~G----------------d~Vl~~~~~y~~t 113 (388)
T PRK07811 58 TGNPTRTALEEQLAALEGG---AYGRAFSSGMAATDCLLRAVL-----RPG----------------DHIVIPNDAYGGT 113 (388)
T ss_pred CCCccHHHHHHHHHHHhCC---CceEEeCCHHHHHHHHHHHHh-----CCC----------------CEEEEcCCCchHH
Confidence 3456688999999998874 456667899999999988651 222 2678777777542
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
. ..+... .. ..+.. +.+.|. .+
T Consensus 114 ~-~~~~~~-~~------------~~gi~------------------------------~~~~d~-------~d------- 135 (388)
T PRK07811 114 F-RLIDKV-FT------------RWGVE------------------------------YTPVDL-------SD------- 135 (388)
T ss_pred H-HHHHHh-Cc------------CCCeE------------------------------EEEeCC-------CC-------
Confidence 2 111110 00 00000 001110 00
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .++.+|++|.. .+..|.... +++|.++|++||+++|+||++. .+-.+.. .+
T Consensus 136 -~e~l~~~i~--------~~tklV~ie~p-~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a-~~~~~~p-----~~ 195 (388)
T PRK07811 136 -LDAVRAAIT--------PRTKLIWVETP-TNPLLSITD----IAALAELAHDAGAKVVVDNTFA-SPYLQQP-----LA 195 (388)
T ss_pred -HHHHHHhcC--------cCCeEEEEECC-CCCcceecC----HHHHHHHHHHcCCEEEEECCCC-ccccCCc-----hh
Confidence 145555553 25679999865 566665544 9999999999999999999984 2222221 12
Q ss_pred CCCcEE--EecccccC-Cccccceeecc-hHHHh
Q 003466 680 CVPDIA--CYGKLLTG-GVIPLAATLAT-NAVFD 709 (818)
Q Consensus 680 v~PDiv--tlgKgLgg-Gy~PlsAvl~~-~~i~~ 709 (818)
.-.|++ .++|.++| |-.-.|+++++ +++.+
T Consensus 196 ~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~ 229 (388)
T PRK07811 196 LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDE 229 (388)
T ss_pred hCCcEEEecCceeecCCCCcEEEEEEECCHHHHH
Confidence 235776 57799986 21224666664 55544
No 298
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=98.60 E-value=1.8e-06 Score=97.84 Aligned_cols=168 Identities=11% Similarity=0.060 Sum_probs=102.2
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+ .+.+++++||++|+..++.... +.| ..|++.+.+|.+.
T Consensus 50 ~~npt~~~Le~~lA~leg---~e~ivvt~gg~~Ai~~~l~all-----~~G----------------d~Il~~~~~y~~~ 105 (388)
T PRK08861 50 SGNPNRGLLEQTLSELES---GKGAVVTNCGTSALNLWVSALL-----GPD----------------DLIVAPHDCYGGT 105 (388)
T ss_pred CCCchHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHHc-----CCC----------------CEEEEcCCchHHH
Confidence 446778899999999987 3799999999999999997551 222 2577767766542
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
. ..+..... +. + .....++ ..|
T Consensus 106 ~-~~~~~~~~---~~----------g-------------i~v~~vd--------------~~d----------------- 127 (388)
T PRK08861 106 Y-RLFNTRAN---KG----------D-------------FKVQFVD--------------QSD----------------- 127 (388)
T ss_pred H-HHHHHHHh---cC----------C-------------eEEEEEC--------------CCC-----------------
Confidence 2 11100000 00 0 0000000 011
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-CcccCCccchhccc
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GFWRLGVETTADLL 678 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-GfGRtG~~~a~e~~ 678 (818)
.+.+++.+. +++.+|++|.. .+..|.+.+ +++|.++|+++|+++|+||++. |+.. .-.
T Consensus 128 -~e~l~~~i~--------~~tklV~lesP-~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~~~~-------~pl 186 (388)
T PRK08861 128 -AAALDAALA--------KKPKLILLETP-SNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTPVLQ-------KPL 186 (388)
T ss_pred -HHHHHHhcC--------cCCeEEEEECC-CCCCCcccC----HHHHHHHHHHcCCEEEEECCccccccC-------CCc
Confidence 134555553 35678999875 777787776 7899999999999999999984 2211 112
Q ss_pred CCCCcEE--EecccccCC-ccccceeecc-hHHHhh
Q 003466 679 GCVPDIA--CYGKLLTGG-VIPLAATLAT-NAVFDS 710 (818)
Q Consensus 679 gv~PDiv--tlgKgLggG-y~PlsAvl~~-~~i~~~ 710 (818)
.+-.|++ .+.|-++|. =.-.|+++++ +++++.
T Consensus 187 ~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~ 222 (388)
T PRK08861 187 ELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEE 222 (388)
T ss_pred ccCCCEEEeecceeccCCCcceeEEEEecHHHHHHH
Confidence 2346776 577888762 1224556564 455443
No 299
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=98.60 E-value=4.8e-06 Score=96.07 Aligned_cols=46 Identities=22% Similarity=0.209 Sum_probs=37.1
Q ss_pred HHHHHHHHHhCCceEe----ec----CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMR----PL----GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~----p~----g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+.+++++|.++|+.+. +. .+.+|++++...|++||++++++|++.+
T Consensus 393 ~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 393 AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 4578999999988742 21 3589999998899999999999998654
No 300
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.60 E-value=3.6e-06 Score=94.52 Aligned_cols=167 Identities=15% Similarity=0.174 Sum_probs=107.0
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CC
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GG 694 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gG 694 (818)
++.+|++... ++-.|.+. +.+-++++.+.|+ +++++|+||++..|.. .. ......+..+.++ +|||.+| .|
T Consensus 152 ~~~lv~l~~p-~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~Deay~~f~~-~~-~~~~~~~~~~~vi~~~SfSK~~gl~G 226 (364)
T PRK04781 152 NAKLVFLCSP-SNPAGSAI-ALDQIERALQALQ-GKALVVVDEAYGEFSD-VP-SAVGLLARYDNLAVLRTLSKAHALAA 226 (364)
T ss_pred CCeEEEEcCC-CCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeCcchhhcC-Cc-chHHHHhhCCCEEEEecChhhccccc
Confidence 4455555443 78888877 5666777777775 4899999999987742 11 1111122234433 8999998 77
Q ss_pred ccccceeecchHHHhhccCChH--------------HH------------------HHHHHHHHHcCCCee-EEEeeeeE
Q 003466 695 VIPLAATLATNAVFDSFVGDSK--------------LW------------------DLELIQQISSHRTVQ-RVVALGTL 741 (818)
Q Consensus 695 y~PlsAvl~~~~i~~~l~~~~~--------------~~------------------~~~l~~~l~~~~~v~-~vrg~Gl~ 741 (818)
+-+|.+++++++++.+..... .+ ++.+.+.++.++.+. .....|.+
T Consensus 227 -lRvGy~v~~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f 305 (364)
T PRK04781 227 -ARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNF 305 (364)
T ss_pred -ceeeeeeCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcE
Confidence 799999999999886642211 00 012334455554432 23345666
Q ss_pred EEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec------CCEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 742 CAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL------GNVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 742 ~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~------g~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
+-+++. + +..+.+.|.++||++++. ++.+|++.. ++++.++++++|++..
T Consensus 306 ~~~~~~-~----------~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 306 LLVRFD-D----------AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred EEEEcC-C----------HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHHH
Confidence 655553 1 346788899999999884 256888764 5789999998887654
No 301
>PLN02672 methionine S-methyltransferase
Probab=98.60 E-value=8e-06 Score=101.62 Aligned_cols=319 Identities=13% Similarity=0.071 Sum_probs=179.2
Q ss_pred EEEeCCcCccccceeecccccccccCCCCCCHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCC--CCcEE
Q 003466 388 SVYQDQKNKFIGQQFDACASWWTQGPDATLQIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGW--ASRAY 465 (818)
Q Consensus 388 ~v~D~dG~~~~~~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~--l~~v~ 465 (818)
++++.+|. .+|++..|. +.++ - +|.|++|+.+.+.+..+. .+..+....+++++++..|-.. -+.++
T Consensus 690 ~~~~~~g~----~vI~LsinE--~d~p-p-Pp~V~eAi~eal~~~~~s---~g~pdlr~aLa~~la~~~Gv~~d~~e~II 758 (1082)
T PLN02672 690 SVSGSQES----SLIHMDVDE--SFLP-V-PSAVKASIFESFVRQNIS---ESETDPRPSILQFIKSNYGFPTDSCTEFV 758 (1082)
T ss_pred CCcccCCC----CEEEEeCCC--CCCC-C-CHHHHHHHHHHHhhcCCC---CCChHHHHHHHHHHHHHhCcCCCCCCEEE
Confidence 46666777 888887643 3344 3 789999999887654331 1234567889999988655321 12577
Q ss_pred EeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCC
Q 003466 466 FSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRG 545 (818)
Q Consensus 466 f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~ 545 (818)
++++..++...++... . ..| ..|++...+|......+- ..|..
T Consensus 759 vt~Gs~elL~lll~aL----l-~pG----------------D~VLVp~PtY~~Y~~~a~-~~Ga~--------------- 801 (1082)
T PLN02672 759 YGDTSLALFNKLVLCC----V-QEG----------------GTLCFPAGSNGTYVSAAK-FLKAN--------------- 801 (1082)
T ss_pred EeCCHHHHHHHHHHHH----c-CCC----------------CEEEEeCCChHHHHHHHH-HcCCE---------------
Confidence 7776666665665544 1 222 368888888876432221 11211
Q ss_pred cccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEE
Q 003466 546 LFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALII 625 (818)
Q Consensus 546 ~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIv 625 (818)
.+.+|-.. +..|+ .| .+.+++.+.. ..+.+.+++
T Consensus 802 ---------------vv~Vpl~~---------------e~gf~--lD--------~d~Le~al~~------~~~~~I~L~ 835 (1082)
T PLN02672 802 ---------------FRRIPTKS---------------SDGFK--LT--------AKTLASTLET------VKKPWVYIS 835 (1082)
T ss_pred ---------------EEEEeccc---------------ccCCC--CC--------HHHHHHHhcc------CCCCEEEEE
Confidence 01111000 00000 00 1456666642 123357788
Q ss_pred ccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc---hh----ccc-CCCC--cEE---Eeccccc
Q 003466 626 EPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET---TA----DLL-GCVP--DIA---CYGKLLT 692 (818)
Q Consensus 626 EPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~---a~----e~~-gv~P--Div---tlgKgLg 692 (818)
-|- ++-.|.+. +.+.+++|.++|++||+++|.||++.++--.|+.+ .. ..+ ...+ .++ +|||..+
T Consensus 836 nPn-hNPTG~v~-S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 836 GPT-INPTGLLY-SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred CcC-CCCcCccC-CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 884 47778765 89999999999999999999999998664344321 00 011 1112 122 6888776
Q ss_pred -CCccccceeecch-HHHhhccCC-------h--H-----H---H-------H--------------HHHHHHHHcCCCe
Q 003466 693 -GGVIPLAATLATN-AVFDSFVGD-------S--K-----L---W-------D--------------LELIQQISSHRTV 732 (818)
Q Consensus 693 -gGy~PlsAvl~~~-~i~~~l~~~-------~--~-----~---~-------~--------------~~l~~~l~~~~~v 732 (818)
.| +-+|.+++++ ++++.+... . . . + . +.+.+.++.++ +
T Consensus 914 lpG-LRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~G-i 991 (1082)
T PLN02672 914 SGG-HEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACG-W 991 (1082)
T ss_pred cHH-HHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 45 7888899854 466655321 0 0 0 0 0 01223334443 2
Q ss_pred eEEEeeeeEEEE-EEecCc-cc---CCCc-----hHHHHHHHHHHHhC-CceEeec---C--CEEEEECCCCChHHHHHH
Q 003466 733 QRVVALGTLCAI-ELQAAG-CN---AGYG-----SLYAASLLKKLRED-GVYMRPL---G--NVIYLMCGPCSSPEVCSQ 796 (818)
Q Consensus 733 ~~vrg~Gl~~~i-el~~~~-~~---~~~~-----~~~a~~~~~~l~e~-Gvlv~p~---g--~~ir~~ppl~~t~edId~ 796 (818)
.-....|.++.+ .+..-. .. ..++ ......+++.|+++ ||.+.|+ | +-+|+... .+++++++
T Consensus 992 ~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa--~~~e~Lee 1069 (1082)
T PLN02672 992 DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA--LEDSEFDR 1069 (1082)
T ss_pred eEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec--CCHHHHHH
Confidence 333444444433 221100 00 0000 01246788888865 9999984 2 56777665 47889999
Q ss_pred HHHHHHHHHH
Q 003466 797 LLLKLYQRLE 806 (818)
Q Consensus 797 ~~~~l~~~l~ 806 (818)
++++|.+.++
T Consensus 1070 ALerL~kf~~ 1079 (1082)
T PLN02672 1070 ALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHH
Confidence 9999987543
No 302
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.60 E-value=6.2e-06 Score=93.84 Aligned_cols=172 Identities=12% Similarity=0.131 Sum_probs=102.6
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc-ch-hcccC---CCCcEEEeccccc-
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-TT-ADLLG---CVPDIACYGKLLT- 692 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-~a-~e~~g---v~PDivtlgKgLg- 692 (818)
++.+|++-. .++-.|.+. +.+-+++|.++|++||+++|.||++..|-..+.. .. ...-+ ..-.+-+|||.+|
T Consensus 173 ~~~~i~l~n-P~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 250 (402)
T TIGR03542 173 KIDIIYLCS-PNNPTGTVL-TKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGF 250 (402)
T ss_pred CceEEEEeC-CCCCCCccC-CHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCC
Confidence 344444433 277788766 8889999999999999999999999877322211 11 11111 1112348999997
Q ss_pred CCccccceeecchHHH--------hhcc--------CChH--------HH---------------H---HHHHHHHHcCC
Q 003466 693 GGVIPLAATLATNAVF--------DSFV--------GDSK--------LW---------------D---LELIQQISSHR 730 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~--------~~l~--------~~~~--------~~---------------~---~~l~~~l~~~~ 730 (818)
.| +-+|.++++++++ ..+. ..+. .+ . +.+.+.++.++
T Consensus 251 pG-lRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 329 (402)
T TIGR03542 251 TG-VRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG 329 (402)
T ss_pred CC-cceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 67 7999999988765 2210 0110 00 0 01223344433
Q ss_pred CeeEEEee-eeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHHHHHHH
Q 003466 731 TVQRVVAL-GTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQLLLKL 801 (818)
Q Consensus 731 ~v~~vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~~~~~l 801 (818)
+.-..+. |.++-+.+... ..+..++..|+ ++||++.|+ .+.+|+.. ..+++++++++++|
T Consensus 330 -~~~~~~~~~~f~~v~l~~~--------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~l~~~l~~l 398 (402)
T TIGR03542 330 -FKVYGGEHAPYLWVKTPEG--------ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSA--FGKRENIVEACERI 398 (402)
T ss_pred -ceecCCCceeEEEEECCCC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHH
Confidence 2112233 44444554321 11446777777 579999873 25678873 34789999999998
Q ss_pred HHH
Q 003466 802 YQR 804 (818)
Q Consensus 802 ~~~ 804 (818)
.++
T Consensus 399 ~~~ 401 (402)
T TIGR03542 399 KEA 401 (402)
T ss_pred Hhh
Confidence 765
No 303
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.59 E-value=1.8e-05 Score=90.21 Aligned_cols=171 Identities=12% Similarity=0.107 Sum_probs=103.5
Q ss_pred cEEEEE-EccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccc-hhcccCCCCc----EEEeccccc
Q 003466 619 CIGALI-IEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVET-TADLLGCVPD----IACYGKLLT 692 (818)
Q Consensus 619 ~iAAVI-vEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~-a~e~~gv~PD----ivtlgKgLg 692 (818)
++.+|+ .-| ++-.|.+. +.+-+++|.++|++||+++|.||++..|-..+... ....+.-.++ +-+|||.+|
T Consensus 176 ~~k~i~l~nP--~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~ 252 (409)
T PRK07590 176 KVDIIYLCFP--NNPTGTVL-TKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAG 252 (409)
T ss_pred CceEEEEeCC--CCCcCCcC-CHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccC
Confidence 344444 455 67778766 78899999999999999999999998763223211 1111111122 237999997
Q ss_pred -CCccccceeecchHHHhhc--------------------cCChH--------HHH------------------HHHHHH
Q 003466 693 -GGVIPLAATLATNAVFDSF--------------------VGDSK--------LWD------------------LELIQQ 725 (818)
Q Consensus 693 -gGy~PlsAvl~~~~i~~~l--------------------~~~~~--------~~~------------------~~l~~~ 725 (818)
.| +-+|.+++++++++.+ ...+. .+. +.+.+.
T Consensus 253 ~pG-lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~ 331 (409)
T PRK07590 253 FTG-TRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREG 331 (409)
T ss_pred CcC-ceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 77 7999999998887621 00110 010 112233
Q ss_pred HHcCCCeeEEEeee-eEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeec-------CCEEEEECCCCChHHHHHH
Q 003466 726 ISSHRTVQRVVALG-TLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPL-------GNVIYLMCGPCSSPEVCSQ 796 (818)
Q Consensus 726 l~~~~~v~~vrg~G-l~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~-------g~~ir~~ppl~~t~edId~ 796 (818)
++.++ +.-..+.| .++-+.+... ..+..++..|+ ++||++.|+ .+.+|++. ..+++++++
T Consensus 332 L~~~~-~~~~~~~g~~f~wi~~~~~--------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~ 400 (409)
T PRK07590 332 LESAG-FEVYGGVNAPYIWVKTPDG--------MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSA--FGSRENVLE 400 (409)
T ss_pred HHhcC-CceecCCcceEEEEECCCC--------CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEc--cCCHHHHHH
Confidence 44443 22222333 3444444321 12456777776 579999873 24688873 457899999
Q ss_pred HHHHHHHH
Q 003466 797 LLLKLYQR 804 (818)
Q Consensus 797 ~~~~l~~~ 804 (818)
.+++|.++
T Consensus 401 ~l~rl~~~ 408 (409)
T PRK07590 401 AMERIKKA 408 (409)
T ss_pred HHHHHHhh
Confidence 99998765
No 304
>PLN02231 alanine transaminase
Probab=98.59 E-value=1.1e-05 Score=95.20 Aligned_cols=311 Identities=13% Similarity=0.088 Sum_probs=168.9
Q ss_pred CHHHHHHHHHhhhhc-----ccccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhcccc
Q 003466 418 QIELARDMGYTAARF-----GHVMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEV 491 (818)
Q Consensus 418 hp~V~eAi~~q~~~~-----~~~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~ 491 (818)
..++++++.+.++.. +.++...+..+....+|+.+.+..|.. ..+.+++++++++|+..++++.. ...
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~----~~~-- 215 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI----RSE-- 215 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhc----cCC--
Confidence 345556555555432 111222344566777777776643311 13689999999999999998761 111
Q ss_pred cccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhh
Q 003466 492 LVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSK 571 (818)
Q Consensus 492 ~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~ 571 (818)
...|++..-+|.+.... +...|.. .+++|-
T Consensus 216 --------------gd~Vli~~P~Y~~y~~~-~~~~g~~------------------------------~v~~~l----- 245 (534)
T PLN02231 216 --------------KDGILCPIPQYPLYSAS-IALHGGT------------------------------LVPYYL----- 245 (534)
T ss_pred --------------CCEEEEeCCCChhHHHH-HHHcCCE------------------------------EEEEec-----
Confidence 23688888888864322 2222211 011110
Q ss_pred ccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEE-EEEccccccCCCcccCCHHHHHHHHHHH
Q 003466 572 IVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGA-LIIEPVVHAAGGMHMVDPLFQRILVKEC 650 (818)
Q Consensus 572 ~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAA-VIvEPV~~g~gG~~~~p~~fl~~LreLc 650 (818)
|.+..|. -| .+.|++.++... ....++.+ +++.| ++-.|.+. +.+-+++|.++|
T Consensus 246 ----------~~~~~~~--~d--------~~~Le~~l~~~~--~~~~~~k~ivl~nP--~NPTG~vl-s~e~l~~Iv~~a 300 (534)
T PLN02231 246 ----------DEATGWG--LE--------ISELKKQLEDAR--SKGITVRALVVINP--GNPTGQVL-AEENQRDIVEFC 300 (534)
T ss_pred ----------CcccCCC--CC--------HHHHHHHHHHHh--hcCCCeEEEEEeCC--CCCCCcCC-CHHHHHHHHHHH
Confidence 0000000 00 145556654310 11124554 56666 67788766 899999999999
Q ss_pred HhcCCcEEEeecccCcccC-Cccc-hhcc----cCC---CCcEE---EecccccC--Cccccceeec---chHHHhhccC
Q 003466 651 QNRKIPVIFDEVFTGFWRL-GVET-TADL----LGC---VPDIA---CYGKLLTG--GVIPLAATLA---TNAVFDSFVG 713 (818)
Q Consensus 651 ~~~gilLI~DEV~TGfGRt-G~~~-a~e~----~gv---~PDiv---tlgKgLgg--Gy~PlsAvl~---~~~i~~~l~~ 713 (818)
++||+++|.|||+.-+--. |+-+ .+.. .|. ...++ .+||++.| | +-+|.+++ ++++++.+..
T Consensus 301 ~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pG-lRiGy~~~~~~~~~l~~~l~k 379 (534)
T PLN02231 301 KQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECG-KRGGYMEVTGFTSDVREQIYK 379 (534)
T ss_pred HHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCc-cceEEEEEecCCHHHHHHHHH
Confidence 9999999999999766221 2221 1111 121 11233 68998743 6 67777765 5666654421
Q ss_pred Ch------H---------HH--------------H------H-------HHHHHHHcCCCeeEEEeeeeEEEE-EEecCc
Q 003466 714 DS------K---------LW--------------D------L-------ELIQQISSHRTVQRVVALGTLCAI-ELQAAG 750 (818)
Q Consensus 714 ~~------~---------~~--------------~------~-------~l~~~l~~~~~v~~vrg~Gl~~~i-el~~~~ 750 (818)
.. . .+ . + .+.+.++.++.+.-....|.|+.+ .+.-..
T Consensus 380 ~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~ 459 (534)
T PLN02231 380 VASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQ 459 (534)
T ss_pred HHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcH
Confidence 00 0 11 0 0 122334445445444566766665 221110
Q ss_pred ccC----CCchHHHHHHHHHHH-hCCceEeec---C-----CEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhH
Q 003466 751 CNA----GYGSLYAASLLKKLR-EDGVYMRPL---G-----NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVE 812 (818)
Q Consensus 751 ~~~----~~~~~~a~~~~~~l~-e~Gvlv~p~---g-----~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~ 812 (818)
... .........++..|+ +.||.+.|+ + ..+|++. ..++++|++.+++|.+.++++.+.+
T Consensus 460 ~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~--~~~~e~l~eal~RL~~~~~~~~~~~ 532 (534)
T PLN02231 460 KAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI--LPQEDKIPAIVSRLTEFHKSFMDEF 532 (534)
T ss_pred HHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe--CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 000001223566666 579999873 1 2477764 4688999999999999988876544
No 305
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.56 E-value=3.8e-06 Score=96.52 Aligned_cols=153 Identities=14% Similarity=0.046 Sum_probs=95.0
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.+++++||+.|+.+++.... ..| ..||+....| |.
T Consensus 66 ~~~p~~~~Le~~lA~l~g~---~~av~~sSG~aAi~~al~all-----~~G----------------d~Vv~~~~~y-~~ 120 (436)
T PRK07812 66 IMNPTQDVVEQRIAALEGG---VAALLLASGQAAETFAILNLA-----GAG----------------DHIVSSPRLY-GG 120 (436)
T ss_pred CCCchHHHHHHHHHHHhCC---CeEEEEccHHHHHHHHHHHHh-----CCC----------------CEEEEeCCcc-hH
Confidence 3467788999999999874 578889999999999996441 122 2567666555 43
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
+...+... .. + .|. ..+. ++|. .+
T Consensus 121 t~~~~~~~-l~--~----------~Gi-------------~v~~----------------vdd~-------~d------- 144 (436)
T PRK07812 121 TYNLFHYT-LP--K----------LGI-------------EVSF----------------VEDP-------DD------- 144 (436)
T ss_pred HHHHHHHH-hh--c----------CeE-------------EEEE----------------ECCC-------CC-------
Confidence 32211100 00 0 000 0000 0110 00
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .+..+|++|.+ .+..|.+.+ +++|.++|++||+++|+|+++. .+.... ...
T Consensus 145 -~e~l~~ai~--------~~tklV~ie~~-sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a-~~~~~~-----pl~ 204 (436)
T PRK07812 145 -LDAWRAAVR--------PNTKAFFAETI-SNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIA-TPYLIR-----PLE 204 (436)
T ss_pred -HHHHHHhCC--------CCCeEEEEECC-CCCCCeecC----HHHHHHHHHHcCCEEEEECCCc-ccccCC-----chh
Confidence 144555553 35679999987 778888887 9999999999999999999884 222211 112
Q ss_pred CCCcEE--EecccccC
Q 003466 680 CVPDIA--CYGKLLTG 693 (818)
Q Consensus 680 v~PDiv--tlgKgLgg 693 (818)
.-.|++ .+.|.++|
T Consensus 205 ~GaDivv~S~tK~lgg 220 (436)
T PRK07812 205 HGADIVVHSATKYLGG 220 (436)
T ss_pred cCCCEEEEecccccCC
Confidence 236775 68899875
No 306
>PRK08064 cystathionine beta-lyase; Provisional
Probab=98.55 E-value=4.5e-06 Score=94.74 Aligned_cols=81 Identities=17% Similarity=0.116 Sum_probs=52.5
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccC--C
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTG--G 694 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLgg--G 694 (818)
++.+|++|.. .+..|.+.+ +++|.++|+++|+++|+||++..+ -.... . .+| .|++ .+.|.++| |
T Consensus 138 ~tklV~l~~p-~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~-~~~~~--~-~~g--~Divv~S~tK~~~G~~~ 206 (390)
T PRK08064 138 NTKLFYVETP-SNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTP-LLQKP--L-DLG--ADVVLHSATKFLAGHSD 206 (390)
T ss_pred CceEEEEECC-CCCCcEecc----HHHHHHHHHHcCCEEEEECCCCcc-cccCc--h-hhC--CcEEEeecceeccCCcc
Confidence 5678999975 666777765 899999999999999999998432 11111 1 223 5777 46798874 2
Q ss_pred ccccceeec-chHHHhhc
Q 003466 695 VIPLAATLA-TNAVFDSF 711 (818)
Q Consensus 695 y~PlsAvl~-~~~i~~~l 711 (818)
.+ .|++++ ++++++.+
T Consensus 207 ~l-aG~~v~~~~~~~~~l 223 (390)
T PRK08064 207 VL-AGLAVVKDEELAQKL 223 (390)
T ss_pred ce-eEEEEeCCHHHHHHH
Confidence 11 233444 45665544
No 307
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=98.54 E-value=2.7e-06 Score=96.29 Aligned_cols=171 Identities=15% Similarity=0.093 Sum_probs=103.8
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
.+.++...+|+++|+++.+. +.+++++||++|+..++.... ..| ..|++.+.+|.+
T Consensus 47 R~~~p~~~~le~~lA~l~g~---~~v~~~~gg~~Ai~~~l~all-----~~G----------------D~Vl~~~p~y~~ 102 (382)
T TIGR02080 47 RSGNPTRDLLQQALAELEGG---AGAVVTNTGMSAIHLVTTALL-----GPD----------------DLLVAPHDCYGG 102 (382)
T ss_pred CCCCchHHHHHHHHHHHhCC---CcEEEEcCHHHHHHHHHHHHc-----CCC----------------CEEEEcCCCcHH
Confidence 34567789999999998873 579999999999999887651 122 367777777765
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
.......+.+.. + ..+. +.|. .+
T Consensus 103 ~~~~~~~~~~~~--------------~--------------~~v~----------------~~d~-------~d------ 125 (382)
T TIGR02080 103 TYRLLNALAKKG--------------C--------------FRVL----------------FVDQ-------GD------ 125 (382)
T ss_pred HHHHHHHHHhhc--------------C--------------eEEE----------------EECC-------CC------
Confidence 221111111000 0 0000 0000 00
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL 678 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~ 678 (818)
.+.+++.+. .++.+|++|.. .+..|.+.+ +++|.++|+++|+++|+||++..+ ..-. -+
T Consensus 126 --~~~l~~ai~--------~~tklV~l~~p-~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~-~~~~-----pl 184 (382)
T TIGR02080 126 --EQALRAALA--------QKPKLVLIETP-SNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSP-ALQN-----PL 184 (382)
T ss_pred --HHHHHHhcC--------cCceEEEEECC-CCCCCEecC----HHHHHHHHHHcCCEEEEECCCccc-ccCC-----ch
Confidence 144555553 24678888875 677787765 789999999999999999998422 1111 11
Q ss_pred CCCCcEE--EecccccCC-ccccceeec-chHHHhhc
Q 003466 679 GCVPDIA--CYGKLLTGG-VIPLAATLA-TNAVFDSF 711 (818)
Q Consensus 679 gv~PDiv--tlgKgLggG-y~PlsAvl~-~~~i~~~l 711 (818)
..-.|++ +++|-++|. =+-.|++++ ++++++.+
T Consensus 185 ~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l 221 (382)
T TIGR02080 185 ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEEL 221 (382)
T ss_pred hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHH
Confidence 1234776 689988752 133555555 56665543
No 308
>PRK09028 cystathionine beta-lyase; Provisional
Probab=98.53 E-value=3.7e-06 Score=95.34 Aligned_cols=259 Identities=15% Similarity=0.140 Sum_probs=148.8
Q ss_pred CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 441 VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 441 ~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.++...+|+++|+++-+. +.+++++||++|+..++...+ +.| ..||+.+..|.+..
T Consensus 59 ~npt~~~Le~~iA~le~~---~~~~~~~sG~~Ai~~~l~all-----~~G----------------D~Vvv~~~~Y~~t~ 114 (394)
T PRK09028 59 GTPTHFAFQAAIVELEGG---AGTALYPSGAAAISNALLSFL-----KAG----------------DHLLMVDSCYEPTR 114 (394)
T ss_pred CCchHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHHHHh-----CCC----------------CEEEEECCCcHHHH
Confidence 355677899999998653 578899999999999887541 222 36888888875533
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
.. + +....+ .|.- +.+-|. .+
T Consensus 115 ~l-~---~~~l~~----------~Gi~------------------------------v~~v~~-------~~-------- 135 (394)
T PRK09028 115 DL-C---DKILKG----------FGIE------------------------------TTYYDP-------MI-------- 135 (394)
T ss_pred HH-H---HHhhhh----------cceE------------------------------EEEECC-------CC--------
Confidence 11 0 000000 0000 000000 00
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
.+.+++.+. .++.+|++|.+ .+..|.+. .+++|.++|++||+++|+||+++. +. .+.-...
T Consensus 136 ~e~l~~~l~--------~~TklV~lesp-sNPtg~v~----dl~~I~~la~~~g~~lvvD~t~a~----p~--~~~Pl~~ 196 (394)
T PRK09028 136 GEGIRELIR--------PNTKVLFLESP-GSITMEVQ----DVPTLSRIAHEHDIVVMLDNTWAS----PI--NSRPFEM 196 (394)
T ss_pred HHHHHHhcC--------cCceEEEEECC-CCCCCcHH----HHHHHHHHHHHcCCEEEEECCccc----cc--cCCcccc
Confidence 134555553 35679999986 66666544 499999999999999999999952 21 1222233
Q ss_pred CCcEE--EecccccCC-ccccceeecchHHHhhccCC-----hH------------------HHH------HHHHHHHHc
Q 003466 681 VPDIA--CYGKLLTGG-VIPLAATLATNAVFDSFVGD-----SK------------------LWD------LELIQQISS 728 (818)
Q Consensus 681 ~PDiv--tlgKgLggG-y~PlsAvl~~~~i~~~l~~~-----~~------------------~~~------~~l~~~l~~ 728 (818)
-+|++ ...|-|+|. =.=.|+++.++++.+.+... .. .++ ..+.+-|+.
T Consensus 197 GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~ 276 (394)
T PRK09028 197 GVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLAT 276 (394)
T ss_pred CceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhc
Confidence 46777 578988762 12244566666665533211 00 111 134556778
Q ss_pred CCCeeEE------------------EeeeeEEEEEEecCcccCCCchHHHHHHHHHHH--hCCc--------eEee----
Q 003466 729 HRTVQRV------------------VALGTLCAIELQAAGCNAGYGSLYAASLLKKLR--EDGV--------YMRP---- 776 (818)
Q Consensus 729 ~~~v~~v------------------rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~--e~Gv--------lv~p---- 776 (818)
||.|..| .|.|.|++|++.... .+.+.+|.+.|. ..|. +..|
T Consensus 277 ~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~------~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~ 350 (394)
T PRK09028 277 RPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGD------PKAVTALVEGMQHFKMGFSWGGFESLILGVFGIN 350 (394)
T ss_pred CCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC------HHHHHHHHHhCCcceEecccCCCcceeECCCCcC
Confidence 8877666 367889999996321 133445555443 1111 0001
Q ss_pred ----------cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHh
Q 003466 777 ----------LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKV 811 (818)
Q Consensus 777 ----------~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~ 811 (818)
.++.|||+.-+ ||.+.+++-|+++|+++.++
T Consensus 351 ~~~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~~~~~~ 391 (394)
T PRK09028 351 KLRTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFERYNAV 391 (394)
T ss_pred ccCchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHHH
Confidence 12455665443 56777777788887776654
No 309
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=98.52 E-value=2e-06 Score=90.84 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=72.9
Q ss_pred ChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHH
Q 003466 193 GDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYE 272 (818)
Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~ 272 (818)
..+.+.+.+..+.+. ||+|||.+.+|+.. .+....... -.||+|++....++..+....+
T Consensus 94 ~~~~l~~~l~~l~~~-------------yD~VIiD~p~~~~~------~~~~~l~~a-d~vliv~~~~~~s~~~~~~~~~ 153 (251)
T TIGR01969 94 DPDKLEDVLKEIIDD-------------TDFLLIDAPAGLER------DAVTALAAA-DELLLVVNPEISSITDALKTKI 153 (251)
T ss_pred CHHHHHHHHHHHHhh-------------CCEEEEeCCCccCH------HHHHHHHhC-CeEEEEECCCCchHHHHHHHHH
Confidence 445666777666544 99999999876532 222222222 3488999999888988888877
Q ss_pred HHHhCCCcEEEEEEccCCCC----CHHHHHHhhcCCCCEEe-cCCCCCC
Q 003466 273 SLKLRGYDVVAVVFEDHGLV----NEVPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 273 ~l~~~~~~v~gvi~N~~~~~----~~~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
.++..+.++.|+|+|++... ..+.+++.+ ++|+++ ||+.+..
T Consensus 154 ~~~~~~~~~~~vv~N~~~~~~~~~~~~~l~~~~--~~~~l~~Ip~~~~~ 200 (251)
T TIGR01969 154 VAEKLGTAILGVVLNRVTRDKTELGREEIETIL--EVPVLGVVPEDPEV 200 (251)
T ss_pred HHHhcCCceEEEEEECCCchhhhhHHHHHHHhh--CCcEEEEecCCHhH
Confidence 77777888999999998432 245566666 899999 9987764
No 310
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.51 E-value=1e-05 Score=90.42 Aligned_cols=291 Identities=18% Similarity=0.186 Sum_probs=164.9
Q ss_pred CHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccC
Q 003466 418 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLG 497 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~ 497 (818)
+|+|.+|+.+++-- |.+ .-......++-++|...++..+.+-+++..||+-|+|+|+.-.. .+|
T Consensus 17 ~~~V~~am~~~~~~--h~s--~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~-----~pg------- 80 (383)
T COG0075 17 PPRVLLAMARPMVG--HRS--PDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV-----EPG------- 80 (383)
T ss_pred CHHHHHHhcCCCCC--CCC--HHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc-----CCC-------
Confidence 67777777765422 211 12245666777888887774322456788999999999998662 222
Q ss_pred CCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcccccc
Q 003466 498 KDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKD 577 (818)
Q Consensus 498 ~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~ 577 (818)
.++++..++.-|.-..=+.-.... .+..+..+ |
T Consensus 81 ---------dkVLv~~nG~FG~R~~~ia~~~g~---------------------------~v~~~~~~-w---------- 113 (383)
T COG0075 81 ---------DKVLVVVNGKFGERFAEIAERYGA---------------------------EVVVLEVE-W---------- 113 (383)
T ss_pred ---------CeEEEEeCChHHHHHHHHHHHhCC---------------------------ceEEEeCC-C----------
Confidence 378888887777543322211100 00111111 0
Q ss_pred ccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcE
Q 003466 578 ITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPV 657 (818)
Q Consensus 578 ~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilL 657 (818)
+. .-+ .+.+++.|++. ..-+-++.+-.|. ..|+.-| +++|.++|++||+++
T Consensus 114 ---g~-------~v~--------p~~v~~~L~~~---~~~~~V~~vH~ET----STGvlnp----l~~I~~~~k~~g~l~ 164 (383)
T COG0075 114 ---GE-------AVD--------PEEVEEALDKD---PDIKAVAVVHNET----STGVLNP----LKEIAKAAKEHGALL 164 (383)
T ss_pred ---CC-------CCC--------HHHHHHHHhcC---CCccEEEEEeccC----cccccCc----HHHHHHHHHHcCCEE
Confidence 00 000 25677777631 1112345555564 3578777 999999999999999
Q ss_pred EEeecccCcccCCccchhcccCCCCcEEE--ecccccC--CccccceeecchHHHhhccCChH-----------------
Q 003466 658 IFDEVFTGFWRLGVETTADLLGCVPDIAC--YGKLLTG--GVIPLAATLATNAVFDSFVGDSK----------------- 716 (818)
Q Consensus 658 I~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgKgLgg--Gy~PlsAvl~~~~i~~~l~~~~~----------------- 716 (818)
|+|=|-+ || |..+-.+.||| |+++ -=|+|++ | +|.+..+++..+.+.....
T Consensus 165 iVDaVsS-~G--g~~~~vd~wgi--Dv~itgSQK~l~~PPG---la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~ 236 (383)
T COG0075 165 IVDAVSS-LG--GEPLKVDEWGI--DVAITGSQKALGAPPG---LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKK 236 (383)
T ss_pred EEEeccc-CC--CcccchhhcCc--cEEEecCchhccCCCc---cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhc
Confidence 9998874 53 45666777877 5554 4489986 5 4667888888776654321
Q ss_pred ---------------------HHHHHHHHHHHcCCCe-----eEEEeeeeEEEEEEecCccc-----CCCchHHHHHHHH
Q 003466 717 ---------------------LWDLELIQQISSHRTV-----QRVVALGTLCAIELQAAGCN-----AGYGSLYAASLLK 765 (818)
Q Consensus 717 ---------------------~~~~~l~~~l~~~~~v-----~~vrg~Gl~~~iel~~~~~~-----~~~~~~~a~~~~~ 765 (818)
++++.+.++.++|... ..++..|+-+-.+-. .... ..|.......+..
T Consensus 237 ~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~-~~s~tvta~~~P~g~~~~~~~~ 315 (383)
T COG0075 237 GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPE-RRSPTVTAIKVPEGVDDKKVRR 315 (383)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcc-cCCCceEEEECCCCCCcHHHHH
Confidence 1112222222333211 112222222111000 0000 0011111222233
Q ss_pred HHH-hCCceEee-----cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 766 KLR-EDGVYMRP-----LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 766 ~l~-e~Gvlv~p-----~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
.++ +.|+.+.+ .|..+|+--.=..+..++..++.+|+.+|.++.
T Consensus 316 ~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 316 ALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred HHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 455 45888875 347889888778999999999999999999873
No 311
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.50 E-value=2.9e-05 Score=88.61 Aligned_cols=175 Identities=13% Similarity=0.114 Sum_probs=106.7
Q ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCc---EEEecccccCCccc
Q 003466 621 GALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPD---IACYGKLLTGGVIP 697 (818)
Q Consensus 621 AAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD---ivtlgKgLggGy~P 697 (818)
+.++..| ++-.|.+. +.+-+++|.++|++||+++|.||++.-+ .....+....-...+. +.+|||....| +-
T Consensus 182 ~i~l~~P--~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~~~~~~~~~~vI~~~SfSK~~~pG-lR 256 (416)
T PRK09440 182 AICVSRP--TNPTGNVL-TDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFSEATPLWNPNIILCMSLSKLGLPG-VR 256 (416)
T ss_pred EEEEecC--CCCCCccC-CHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchhhcCccccCCeEEEecccccCCCc-ce
Confidence 3444455 78888877 7899999999999999999999999421 1110000000001122 33799975567 79
Q ss_pred cceeecchHHHhhccCChH---------------------HH----HH-----------HHHHHHHcC-CC--eeEEEee
Q 003466 698 LAATLATNAVFDSFVGDSK---------------------LW----DL-----------ELIQQISSH-RT--VQRVVAL 738 (818)
Q Consensus 698 lsAvl~~~~i~~~l~~~~~---------------------~~----~~-----------~l~~~l~~~-~~--v~~vrg~ 738 (818)
+|.+++++++++.+..... .+ .+ .+.+.+.++ +. +.-+...
T Consensus 257 iG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~ 336 (416)
T PRK09440 257 CGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPE 336 (416)
T ss_pred EEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCC
Confidence 9999999988776532110 00 00 111223222 21 2223344
Q ss_pred -eeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-----C---------CEEEEECCCCChHHHHHHHHHHHHH
Q 003466 739 -GTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-----G---------NVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 739 -Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-----g---------~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
|.++-+++.... ..+..+++.|.++||.+.|+ + +.+|++.. .+++++++++++|.+
T Consensus 337 gg~fiw~~~~~~~-------~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~ 407 (416)
T PRK09440 337 GAIFLWLWFKDLP-------ITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILAE 407 (416)
T ss_pred CceEEEEECCCCC-------CCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHHH
Confidence 455555554310 12456778889999999872 1 25777765 368999999999999
Q ss_pred HHHHHH
Q 003466 804 RLEEFD 809 (818)
Q Consensus 804 ~l~~l~ 809 (818)
++++..
T Consensus 408 ~~~~~~ 413 (416)
T PRK09440 408 EVEKAY 413 (416)
T ss_pred HHHHHh
Confidence 887643
No 312
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.50 E-value=3.8e-06 Score=94.47 Aligned_cols=203 Identities=15% Similarity=0.168 Sum_probs=121.7
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.++.++||.+|+..++.+. +.| ..||+....|+|.
T Consensus 51 ~~~p~~~~le~~lA~leg~---~~~v~~~sG~aAi~~~l~~l------~~G----------------D~VI~~~~~yg~~ 105 (364)
T PRK07269 51 TKNPTRAKLEETLAAIESA---DYALATSSGMSAIVLAFSVF------PVG----------------SKVVAVRDLYGGS 105 (364)
T ss_pred CCCccHHHHHHHHHHHhCC---CeEEEeCCHHHHHHHHHHHh------CCC----------------CEEEEecCCcCch
Confidence 4467788999999999873 68999999999999998532 222 2677777766543
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
... +.... + .+.+. ++|+. |
T Consensus 106 ~~~-~~~~~----------------------~-----~~~~~----------------~~~~~---------d------- 125 (364)
T PRK07269 106 FRW-FNQQE----------------------K-----EGRFH----------------FTYAN---------T------- 125 (364)
T ss_pred HHH-HHHHH----------------------h-----cCcEE----------------EEecC---------C-------
Confidence 210 00000 0 00000 00110 0
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. .+..+|++|.. .+-.|.... +++|.++|+++|+++|+||++.. +.. +...+
T Consensus 126 -~~~l~~~i~--------~~TklV~lesP-~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~----~~~--~~pl~ 185 (364)
T PRK07269 126 -EEELIAAIE--------EDTDIVYIETP-TNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYS----PIY--QRPIE 185 (364)
T ss_pred -HHHHHHhcC--------cCceEEEEECC-CCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcc----ccc--CCchh
Confidence 144555553 24568888875 565665554 99999999999999999999621 111 12234
Q ss_pred CCCcEEE--ecccccC-Cccccceeec-chHHHhhccC-----ChH------------------HHH------HHHHHHH
Q 003466 680 CVPDIAC--YGKLLTG-GVIPLAATLA-TNAVFDSFVG-----DSK------------------LWD------LELIQQI 726 (818)
Q Consensus 680 v~PDivt--lgKgLgg-Gy~PlsAvl~-~~~i~~~l~~-----~~~------------------~~~------~~l~~~l 726 (818)
.-.|+++ +.|-++| |=.=.|++++ ++++++.+.. +.. .++ ..+.+.|
T Consensus 186 ~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L 265 (364)
T PRK07269 186 LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFL 265 (364)
T ss_pred hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 5578886 5588875 2111234555 4566554321 000 111 1234556
Q ss_pred HcCCCeeEEE--eeeeEEEEEEe
Q 003466 727 SSHRTVQRVV--ALGTLCAIELQ 747 (818)
Q Consensus 727 ~~~~~v~~vr--g~Gl~~~iel~ 747 (818)
+.+|.|..|. |.|.+++|++.
T Consensus 266 ~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 266 KKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred HhCCCccEEeCCCcCcEEEEEEC
Confidence 7889877665 78999999985
No 313
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=98.49 E-value=8.7e-06 Score=92.87 Aligned_cols=82 Identities=12% Similarity=0.092 Sum_probs=53.3
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccC-Cc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTG-GV 695 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLgg-Gy 695 (818)
++.+|++|.. .+-.|.+.. +++|.++|++||+++|+||++..-... . ..+ + -.|++ ...|.++| |-
T Consensus 145 ~tklV~l~~P-~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~~~~-~--pl~-~--gaDivv~S~tK~l~g~~~ 213 (405)
T PRK08776 145 SPKLVLIETP-SNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSPALQ-K--PLE-F--GADLVLHSTTKYINGHSD 213 (405)
T ss_pred CCeEEEEECC-CCCCCccCC----HHHHHHHHHHcCCEEEEECCCcccccC-C--ccc-c--cCCEEEecCceeecCCCC
Confidence 4567888865 677777654 899999999999999999998532111 1 111 2 34776 46688875 21
Q ss_pred cccceeec-chHHHhhc
Q 003466 696 IPLAATLA-TNAVFDSF 711 (818)
Q Consensus 696 ~PlsAvl~-~~~i~~~l 711 (818)
.-.|++++ ++++.+.+
T Consensus 214 ~~~G~vv~~~~~l~~~l 230 (405)
T PRK08776 214 VVGGAVVARDAELHQQL 230 (405)
T ss_pred ceEEEEEeCCHHHHHHH
Confidence 34566655 46665544
No 314
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=98.49 E-value=1.3e-05 Score=90.12 Aligned_cols=185 Identities=16% Similarity=0.098 Sum_probs=108.2
Q ss_pred HHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCC
Q 003466 419 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGK 498 (818)
Q Consensus 419 p~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~ 498 (818)
.+..+++.+.++.-.. +...+...++++++++.++ ...++.++||+.|...|++.+ +-
T Consensus 5 ~e~~~~v~~~l~s~~~----~~~g~~~~~fE~~~a~~~g---~~~~~~~~sgt~Al~~al~~l-----~~---------- 62 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWL----STYGPYVEEFEKEFAEYFG---VKYAVAVSSGTSALHLALRAL-----GL---------- 62 (363)
T ss_dssp HHHHHHHHHHHHHTCC----SSSSHHHHHHHHHHHHHHT---SSEEEEESSHHHHHHHHHHHT-----TG----------
T ss_pred HHHHHHHHHHHHhCCc----cCCCHHHHHHHHHHHHHhC---CCeEEEeCChhHHHHHHHHhc-----CC----------
Confidence 3556666676665421 2225789999999999998 479999999999999999986 21
Q ss_pred CccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccc
Q 003466 499 DTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDI 578 (818)
Q Consensus 499 ~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~ 578 (818)
.....||+-.-+|.+.......++..+.+ .|. -|+.+
T Consensus 63 -----~~gdeVi~p~~t~~~~~~ai~~~G~~pv~---------------~Di-------------~~~~~---------- 99 (363)
T PF01041_consen 63 -----GPGDEVIVPAYTFPATASAILWAGAEPVF---------------VDI-------------DPETL---------- 99 (363)
T ss_dssp -----GTTSEEEEESSS-THHHHHHHHTT-EEEE---------------E-B-------------ETTTS----------
T ss_pred -----CcCceEecCCCcchHHHHHHHHhccEEEE---------------Eec-------------cCCcC----------
Confidence 11247888877777644333322211100 000 00000
Q ss_pred cccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEE
Q 003466 579 TFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVI 658 (818)
Q Consensus 579 ~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI 658 (818)
-.| .+.+++.|. .+..|||+=-+ .| ... -+.+|+++|++||+.||
T Consensus 100 -~id------------------~~~~~~~i~--------~~t~ai~~~h~-~G---~~~----d~~~i~~~~~~~~i~lI 144 (363)
T PF01041_consen 100 -NID------------------PEALEKAIT--------PKTKAILVVHL-FG---NPA----DMDAIRAIARKHGIPLI 144 (363)
T ss_dssp -SB-------------------HHHHHHHHH--------TTEEEEEEE-G-GG---B-------HHHHHHHHHHTT-EEE
T ss_pred -CcC------------------HHHHHHHhc--------cCccEEEEecC-CC---Ccc----cHHHHHHHHHHcCCcEE
Confidence 001 256777776 24466666554 33 222 39999999999999999
Q ss_pred EeecccCcccCCccchhcccCCCCcEEEec----ccccCCccccceeecch-HHHh
Q 003466 659 FDEVFTGFWRLGVETTADLLGCVPDIACYG----KLLTGGVIPLAATLATN-AVFD 709 (818)
Q Consensus 659 ~DEV~TGfGRtG~~~a~e~~gv~PDivtlg----KgLggGy~PlsAvl~~~-~i~~ 709 (818)
-|=+|+ +| ..+.-...|-.-|+.||| |.++.|= .|++++++ ++.+
T Consensus 145 eD~a~a-~g---~~~~g~~~G~~gd~~~fSf~~~K~i~~ge--GG~v~~~~~~~~~ 194 (363)
T PF01041_consen 145 EDAAQA-FG---ARYKGRPVGSFGDIAIFSFHPTKIITTGE--GGAVVTNDPELAE 194 (363)
T ss_dssp EE-TTT-TT----EETTEETTSSSSEEEEESSTTSSS-SSS---EEEEESTHHHHH
T ss_pred Eccccc-cC---ceeCCEeccCCCCceEecCCCCCCCcCCC--CeeEEecHHHHHH
Confidence 999995 43 222223344456888887 8886431 35577754 4433
No 315
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.48 E-value=3.5e-05 Score=88.50 Aligned_cols=303 Identities=12% Similarity=-0.035 Sum_probs=166.0
Q ss_pred CCCCHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCCCC-CcEEE--eCChhHHHHHHHHHHHHHhhhc--
Q 003466 415 ATLQIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKGWA-SRAYF--SDNGSTAIEIALKMAFRKFSFD-- 488 (818)
Q Consensus 415 h~~hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~~l-~~v~f--~~SGseA~e~ALklA~r~~t~~-- 488 (818)
.. +|++.+++...+... +.....+...+...+.-++++++++.+.- +.+.| +++|||||-.||+.+ |..+..
T Consensus 52 ~~-~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~a-r~~~~~~~ 129 (431)
T TIGR01788 52 WM-EPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAM-KWRWRKRM 129 (431)
T ss_pred CC-CHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHH-HHHHHHHH
Confidence 44 899999998888643 32221122235566666777787764211 24544 799999999999988 432211
Q ss_pred --ccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcc
Q 003466 489 --HEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPE 566 (818)
Q Consensus 489 --~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~ 566 (818)
.|. ......|.....=|-+..-++...|.. ...++...
T Consensus 130 ~~~g~------------~~~~~~ii~s~~~H~sv~ka~~~lg~~----------------------------v~~i~~d~ 169 (431)
T TIGR01788 130 EAAGK------------PTDKPNLVMGSNVQVCWEKFARYFDVE----------------------------LREVPMDP 169 (431)
T ss_pred HhcCC------------CCCCcEEEEcCcchHHHHHHHHHcCce----------------------------eEEEecCC
Confidence 110 111234555555555443333222110 00111100
Q ss_pred -hhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHH
Q 003466 567 -WLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRI 645 (818)
Q Consensus 567 -~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~ 645 (818)
.+ .-| .+.|++.|.+ ++..|++--+ ..+.|.+.| +++
T Consensus 170 ~~~-----------~vd------------------~~~L~~~i~~--------~t~lV~~t~g-~t~tG~idp----i~~ 207 (431)
T TIGR01788 170 GRY-----------VID------------------PEQVVEAVDE--------NTIGVVCILG-TTYTGEYED----VKA 207 (431)
T ss_pred Cce-----------eeC------------------HHHHHHHHhh--------CCeEEEEEeC-CCCCcccCC----HHH
Confidence 00 001 2567777752 2345555554 778898888 999
Q ss_pred HHHHHHhc------CCcEEEeecccCccc---CCcc-chhcccCCCCcEEEec--ccccCCccccceeecchH--HHhhc
Q 003466 646 LVKECQNR------KIPVIFDEVFTGFWR---LGVE-TTADLLGCVPDIACYG--KLLTGGVIPLAATLATNA--VFDSF 711 (818)
Q Consensus 646 LreLc~~~------gilLI~DEV~TGfGR---tG~~-~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~--i~~~l 711 (818)
|.++|+++ |+.+.+|=+|.|+-. .++. +-+. -...|.++++ |-+.|- ...|+++.+++ +.+.+
T Consensus 208 I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s~HK~~~~P-~g~G~l~~r~~~~l~~~~ 284 (431)
T TIGR01788 208 LNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVSGHKYGLVY-PGVGWVIWRDEEALPEEL 284 (431)
T ss_pred HHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEECchhccCCC-CCcEEEEEeChHHcchhh
Confidence 99999999 999999999976421 2221 1111 1235666654 443232 34566666653 22221
Q ss_pred -------cCC--------hH----------------------------HHHHHHHHHHHcCCCeeEEE--eeeeEEEEEE
Q 003466 712 -------VGD--------SK----------------------------LWDLELIQQISSHRTVQRVV--ALGTLCAIEL 746 (818)
Q Consensus 712 -------~~~--------~~----------------------------~~~~~l~~~l~~~~~v~~vr--g~Gl~~~iel 746 (818)
... ++ .+.+.+.+.+++.+.+.-+- ....++.+.+
T Consensus 285 ~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~ 364 (431)
T TIGR01788 285 IFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKL 364 (431)
T ss_pred eecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEe
Confidence 100 00 01122445566666543221 1344555655
Q ss_pred ecCcccCCCchHHHHHHHHHHHhCCceEe----ec---C-CEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 747 QAAGCNAGYGSLYAASLLKKLREDGVYMR----PL---G-NVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 747 ~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~----p~---g-~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
.... . .......+.++|.++|+.+. |. | -.+|++....++.+.++.+++.|.+++.++
T Consensus 365 ~~~~-~---~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 365 KDDA-D---PGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCCC-C---CCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 4321 0 01124568889999998642 21 2 356777766788999999999999988765
No 316
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.48 E-value=6.3e-06 Score=94.69 Aligned_cols=162 Identities=13% Similarity=0.097 Sum_probs=99.3
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.+++++||+.|+..++.... ..| ..|++.+..|+|.
T Consensus 61 ~~~p~~~~Le~~lA~leg~---~~al~~~sG~~Ai~~al~~ll-----~~G----------------D~Vlv~~~~y~~t 116 (431)
T PRK08248 61 IMNPTTDVFEKRIAALEGG---IGALAVSSGQAAITYSILNIA-----SAG----------------DEIVSSSSLYGGT 116 (431)
T ss_pred CCCchHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHHHHh-----CCC----------------CEEEEccCchhhH
Confidence 3467788999999999873 688899999999999987541 122 2677777666553
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
. ..+...- . ..| ...+.+| ..|
T Consensus 117 ~-~~~~~~~-~------------~~G-------------v~v~~vd--------------~~d----------------- 138 (431)
T PRK08248 117 Y-NLFAHTL-P------------KLG-------------ITVKFVD--------------PSD----------------- 138 (431)
T ss_pred H-HHHHHHH-H------------hCC-------------EEEEEEC--------------CCC-----------------
Confidence 2 2111000 0 000 0000001 111
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. +++.+|++|.. .+..|.+.+ +++|.++|+++|+++|+|+++. ++.. ..-..
T Consensus 139 -~e~l~~ai~--------~~tklV~l~sp-~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a----~~~~--~~pl~ 198 (431)
T PRK08248 139 -PENFEAAIT--------DKTKALFAETI-GNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFA----SPYL--LRPIE 198 (431)
T ss_pred -HHHHHHhcC--------CCCeEEEEECC-CCCCCcccC----HHHHHHHHHHcCCEEEEeCCCC----cccc--CChhH
Confidence 144555553 25678888875 677787775 7899999999999999999984 1211 11112
Q ss_pred CCCcEEE--ecccccCCccccceeec
Q 003466 680 CVPDIAC--YGKLLTGGVIPLAATLA 703 (818)
Q Consensus 680 v~PDivt--lgKgLggGy~PlsAvl~ 703 (818)
.-.|+++ +.|.++|.-..+|++++
T Consensus 199 ~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 199 HGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred cCCCEEEEcCccccCCCCCceEEEEE
Confidence 2367764 67999862134555444
No 317
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=98.47 E-value=1e-05 Score=92.09 Aligned_cols=200 Identities=13% Similarity=0.030 Sum_probs=113.9
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccch----hcc
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETT----ADL 677 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a----~e~ 677 (818)
+.+++.|.. .+..+++.|.+|-.....|| .+.+...+++++++|++||+.||.|=++. || .+ +|- -.+
T Consensus 157 ~~Le~aI~~----~~~~~~~lV~~e~t~N~~GG-~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~g-NA-~~I~~re~g~ 228 (450)
T TIGR02618 157 KKLQKLIDE----VGADKIPYICLAVTVNLAGG-QPVSMANMREVRELCEAHGIKVFYDATRC-VE-NA-YFIKEREQGY 228 (450)
T ss_pred HHHHHHhcc----ccCcccCceEEEEecccCCC-eeCCHHHHHHHHHHHHHcCCEEEEEccch-hh-Ch-hhhhcccccc
Confidence 667777763 23345666666654244445 55688999999999999999999997773 21 00 110 001
Q ss_pred cCC-----------CCcEEEecccccCCccccceeec--chHHHhhccCC-----h-H----------------------
Q 003466 678 LGC-----------VPDIACYGKLLTGGVIPLAATLA--TNAVFDSFVGD-----S-K---------------------- 716 (818)
Q Consensus 678 ~gv-----------~PDivtlgKgLggGy~PlsAvl~--~~~i~~~l~~~-----~-~---------------------- 716 (818)
.+. -.|. |++|+.-.+..|+|.+++ ++++++..+.. + .
T Consensus 229 ~~~~i~ei~~e~~~~aD~-~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~ 307 (450)
T TIGR02618 229 EDKSIAEILKEMMSYADG-CTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD 307 (450)
T ss_pred cCCCHHHHHHHHhccCcE-EEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh
Confidence 122 2355 778888544478888887 56666533211 0 0
Q ss_pred --HH------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEe----------ec
Q 003466 717 --LW------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMR----------PL 777 (818)
Q Consensus 717 --~~------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~----------p~ 777 (818)
+. .+.|.+.|.+.+....-...|.++-++...--++.+....-+..++-.|+ +-||=.. |.
T Consensus 308 ~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~ 387 (450)
T TIGR02618 308 YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNV 387 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCC
Confidence 00 01233445554431111233455555554322233333333555666665 4455332 11
Q ss_pred --------CCEEEEECCC-CChHHHHHHHHHHHHHHHHHHHH
Q 003466 778 --------GNVIYLMCGP-CSSPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 778 --------g~~ir~~ppl-~~t~edId~~~~~l~~~l~~l~~ 810 (818)
-..+|+..|- +.|.+++|.+.+++....+..+.
T Consensus 388 ~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 429 (450)
T TIGR02618 388 TGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDD 429 (450)
T ss_pred CCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhh
Confidence 1467887777 78999999999999988877553
No 318
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=98.47 E-value=2.3e-06 Score=95.31 Aligned_cols=202 Identities=10% Similarity=-0.012 Sum_probs=117.7
Q ss_pred CCCCCCHHHHHHHHHhhhhcccccCCCC------CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhh
Q 003466 413 PDATLQIELARDMGYTAARFGHVMFPEN------VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFS 486 (818)
Q Consensus 413 lGh~~hp~V~eAi~~q~~~~~~~~~~~~------~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t 486 (818)
.|.- ++.+.+|+.+.+........... ..+...++.++|+++++.+ .+.++|++++++|+..+++.. ....
T Consensus 7 ~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-~~~v~~~~g~t~a~~~~l~~l-~~~~ 83 (353)
T TIGR03235 7 TTPI-DPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGAD-TEEVIFTSGATESNNLAILGL-ARAG 83 (353)
T ss_pred CCCC-CHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCC-CCeEEEeCCHHHHHHHHHHHH-HHhc
Confidence 4555 89999999988754211110000 1234667888899988743 357999999999999999865 2110
Q ss_pred hcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcc
Q 003466 487 FDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPE 566 (818)
Q Consensus 487 ~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~ 566 (818)
.. +++ +.|......|.+........... |. ....++.+.
T Consensus 84 ~~---------------~g~-~~vi~~~~~~~s~~~~~~~~~~~--------------G~-----------~v~~v~~~~ 122 (353)
T TIGR03235 84 EQ---------------KGK-KHIITSAIEHPAVLEPIRALERN--------------GF-----------TVTYLPVDE 122 (353)
T ss_pred cc---------------CCC-CeeeEcccccHHHHHHHHHHHhc--------------CC-----------EEEEEccCC
Confidence 01 111 34444555565443332211000 00 000111110
Q ss_pred hhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHH
Q 003466 567 WLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRIL 646 (818)
Q Consensus 567 ~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~L 646 (818)
.. ..| .+.+++.+. ++..+|++..+ ++..|.+.+ +++|
T Consensus 123 ~~-----------~~d------------------~~~l~~~l~--------~~~~lv~~~~~-~n~tG~~~~----~~~I 160 (353)
T TIGR03235 123 SG-----------RID------------------VDELADAIR--------PDTLLVSIMHV-NNETGSIQP----IREI 160 (353)
T ss_pred CC-----------cCC------------------HHHHHHhCC--------CCCEEEEEEcc-cCCceeccC----HHHH
Confidence 00 011 145555553 24577878876 788898886 8999
Q ss_pred HHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHH
Q 003466 647 VKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAV 707 (818)
Q Consensus 647 reLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i 707 (818)
.++|++||+++|+|++| ++|..- +-.+ ...+|+++++ |.+| -.-+|++.++++.
T Consensus 161 ~~l~~~~~~~~ivD~a~-~~g~~~--~~~~--~~~~D~~~~s~~K~~g--p~g~g~l~~~~~~ 216 (353)
T TIGR03235 161 AEVLEAHEAFFHVDAAQ-VVGKIT--VDLS--ADRIDLISCSGHKIYG--PKGIGALVIRKRG 216 (353)
T ss_pred HHHHHHcCCEEEEEchh-hcCCcc--cccc--ccCCCEEEeehhhcCC--CCceEEEEEccCc
Confidence 99999999999999999 454431 1112 2247999888 9643 1125777788764
No 319
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=98.46 E-value=1.5e-06 Score=89.57 Aligned_cols=76 Identities=18% Similarity=0.067 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHH
Q 003466 195 SKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESL 274 (818)
Q Consensus 195 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l 274 (818)
+.+.+.++.+.++ +|+|||++.. ........-+++.. -.+|+|+..+..+++++..+.+.+
T Consensus 115 ~~l~~~l~~l~~~-------------yD~ViiD~pp-----~~~~~~~~~~~~~~-D~vilV~~~~~~~~~~~~~~~~~l 175 (204)
T TIGR01007 115 SNFKTLIETLRKY-------------FDYIIIDTPP-----IGTVTDAAIIARAC-DASILVTDAGEIKKRDVQKAKEQL 175 (204)
T ss_pred HHHHHHHHHHHhc-------------CCEEEEeCCC-----ccccchHHHHHHhC-CeEEEEEECCCCCHHHHHHHHHHH
Confidence 4456666666544 9999999953 21111222344444 478899999999999999999999
Q ss_pred HhCCCcEEEEEEccC
Q 003466 275 KLRGYDVVAVVFEDH 289 (818)
Q Consensus 275 ~~~~~~v~gvi~N~~ 289 (818)
+..+.++.|+|+|++
T Consensus 176 ~~~~~~~~gvVlN~~ 190 (204)
T TIGR01007 176 EQTGSNFLGVVLNKV 190 (204)
T ss_pred HhCCCCEEEEEEeCc
Confidence 999999999999997
No 320
>PRK05967 cystathionine beta-lyase; Provisional
Probab=98.46 E-value=8.8e-06 Score=92.30 Aligned_cols=171 Identities=11% Similarity=0.034 Sum_probs=102.0
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
...++....|+++|+.+-+. +..++++||.+|+..++...+ +.| ..||+.+..|.+
T Consensus 60 R~gnPt~~~Le~~la~le~~---~~~v~~sSG~aAi~~~l~all-----~~G----------------D~Vlv~~~~Y~~ 115 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEGS---AGTILVPSGLAAVTVPFLGFL-----SPG----------------DHALIVDSVYYP 115 (395)
T ss_pred CCCChHHHHHHHHHHHHhCC---CCEEEECcHHHHHHHHHHHhc-----CCC----------------CEEEEccCCcHH
Confidence 34578888999999987653 456777789999999886541 223 268888888876
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
.......+. ...|.. +.+-|. .+
T Consensus 116 ~~~l~~~~l--------------~~~Gi~------------------------------v~~vd~-------~~------ 138 (395)
T PRK05967 116 TRHFCDTML--------------KRLGVE------------------------------VEYYDP-------EI------ 138 (395)
T ss_pred HHHHHHHHH--------------HhcCeE------------------------------EEEeCC-------CC------
Confidence 431110000 000000 001110 00
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL 678 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~ 678 (818)
.+.+++.+. +++.+|++|.. .+..+ ...-+++|.++|+++|+++|+|+++... ..+---.+
T Consensus 139 --~e~l~~al~--------~~TklV~lesP-sNP~l----~v~dl~~I~~la~~~g~~vvVD~t~a~p----~~~~pl~~ 199 (395)
T PRK05967 139 --GAGIAKLMR--------PNTKVVHTEAP-GSNTF----EMQDIPAIAEAAHRHGAIVMMDNTWATP----LYFRPLDF 199 (395)
T ss_pred --HHHHHHhcC--------cCceEEEEECC-CCCCC----cHHHHHHHHHHHHHhCCEEEEECCccCc----eecChhHc
Confidence 134555554 34679999965 45444 4445999999999999999999998532 11111123
Q ss_pred CCCCcEE--EecccccC-CccccceeecchHHHhhc
Q 003466 679 GCVPDIA--CYGKLLTG-GVIPLAATLATNAVFDSF 711 (818)
Q Consensus 679 gv~PDiv--tlgKgLgg-Gy~PlsAvl~~~~i~~~l 711 (818)
| .|++ ...|-++| |=.=.|+++.+++.++.+
T Consensus 200 G--aDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l 233 (395)
T PRK05967 200 G--VDISIHAATKYPSGHSDILLGTVSANEKCWPQL 233 (395)
T ss_pred C--CCEEEEecccccCCCCCeeEEEEEcCHHHHHHH
Confidence 4 5666 58899886 113345566677654433
No 321
>PLN02880 tyrosine decarboxylase
Probab=98.44 E-value=4e-05 Score=89.47 Aligned_cols=297 Identities=12% Similarity=0.034 Sum_probs=157.8
Q ss_pred ChhHHHHHHHHHhccCCCCC------CcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCC
Q 003466 442 YEPALECAELLLQGVGKGWA------SRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGS 515 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l------~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~s 515 (818)
++...++-++|+++++-+.- ..-+|+++||+||..||.+|+.++....|. ...+.-+|.....
T Consensus 121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~-----------~~~~~~vv~~S~~ 189 (490)
T PLN02880 121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGK-----------NALEKLVVYASDQ 189 (490)
T ss_pred HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcc-----------cccCCeEEEEcCC
Confidence 45666677777777753210 135788999999999999994333222221 0112234555555
Q ss_pred CCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchh
Q 003466 516 YHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSD 595 (818)
Q Consensus 516 YHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~ 595 (818)
-|-+..-++.+.|.... .+..|+.... ..++. +
T Consensus 190 aH~Sv~Kaa~~lGlg~~-------------------------~v~~Vp~d~~-----------------~~~~m--d--- 222 (490)
T PLN02880 190 THSALQKACQIAGIHPE-------------------------NCRLLKTDSS-----------------TNYAL--A--- 222 (490)
T ss_pred chHHHHHHHHHcCCCHH-------------------------HEEEeecCCC-----------------cCCcC--C---
Confidence 68877666666543210 0111211100 00000 0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchh
Q 003466 596 LASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTA 675 (818)
Q Consensus 596 ~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~ 675 (818)
.+.|++.|++.. ..+....+||..-- ....|.+.| +++|.++|++||+.|.+|=++.|+-..-..+-.
T Consensus 223 -----~~~L~~~i~~~~--~~g~~p~~vvataG-TT~~GaiDp----l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~ 290 (490)
T PLN02880 223 -----PELLSEAISTDL--SSGLIPFFLCATVG-TTSSTAVDP----LLELGKIAKSNGMWFHVDAAYAGSACICPEYRH 290 (490)
T ss_pred -----HHHHHHHHHHHH--HCCCccEEEEEecC-CCcCcccCc----HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHH
Confidence 145555554210 11234445555443 455677777 999999999999999999888665332222222
Q ss_pred cccCC-CCcEEE--ecccccCCccccceeecchHH--Hh-------hccC-----------------ChH------H---
Q 003466 676 DLLGC-VPDIAC--YGKLLTGGVIPLAATLATNAV--FD-------SFVG-----------------DSK------L--- 717 (818)
Q Consensus 676 e~~gv-~PDivt--lgKgLggGy~PlsAvl~~~~i--~~-------~l~~-----------------~~~------~--- 717 (818)
..-|+ .+|-++ .=|-+... ++.|+++.++.- .+ ++.. .++ +
T Consensus 291 ~l~gie~aDSit~d~HKwl~~P-~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~ 369 (490)
T PLN02880 291 YIDGVEEADSFNMNAHKWFLTN-FDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMV 369 (490)
T ss_pred HhcCchhcCEEEECchhhcCCC-ccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHH
Confidence 23465 578664 56777666 477777776421 11 1110 000 1
Q ss_pred ------------------HHHHHHHHHHcCCCeeEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceE-ee-
Q 003466 718 ------------------WDLELIQQISSHRTVQRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYM-RP- 776 (818)
Q Consensus 718 ------------------~~~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv-~p- 776 (818)
+.+.+.+.+++.+.+.-+. ....++.+.+.+..............+.++|.+.|-+. ..
T Consensus 370 l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t 449 (490)
T PLN02880 370 LRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHT 449 (490)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEE
Confidence 1112334445555432221 12335556554321100001233456777777776544 33
Q ss_pred --cC-CEEEEECCCC-ChHHHHHHHHHHHHHHHHHHH
Q 003466 777 --LG-NVIYLMCGPC-SSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 777 --~g-~~ir~~ppl~-~t~edId~~~~~l~~~l~~l~ 809 (818)
.| ..+|+++... .|++||+.+++.|.+..+++.
T Consensus 450 ~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 450 VLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred EECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22 5778876554 456999999999998877764
No 322
>PRK08114 cystathionine beta-lyase; Provisional
Probab=98.43 E-value=8.7e-06 Score=92.28 Aligned_cols=208 Identities=15% Similarity=0.112 Sum_probs=127.9
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
...+|-...|+++|+++-+. +.+++++||..|+.+++...+ +.| ..||+....|++
T Consensus 58 R~~nPt~~~le~~la~LEg~---~~a~~~~SGmaAi~~~~~~ll-----~~G----------------D~Vv~~~~~Yg~ 113 (395)
T PRK08114 58 RRGTLTHFSLQEAMCELEGG---AGCALYPCGAAAVANAILAFV-----EQG----------------DHVLMTGTAYEP 113 (395)
T ss_pred CCCChhHHHHHHHHHHHhCC---CeEEEEhHHHHHHHHHHHHHc-----CCC----------------CEEEEeCCCcHH
Confidence 34578889999999997663 688888999999999887541 222 256666666655
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
.. ..+.-. ....|..+ ..+. ..|
T Consensus 114 t~-~l~~~~-------------l~~~Gi~v-----------~~vd----------------~~d---------------- 136 (395)
T PRK08114 114 TQ-DFCSKI-------------LSKLGVTT-----------TWFD----------------PLI---------------- 136 (395)
T ss_pred HH-HHHHHH-------------HHhcCcEE-----------EEEC----------------CCC----------------
Confidence 32 221100 00001000 0000 111
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcC--CcEEEeecccCcccCCccchhc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRK--IPVIFDEVFTGFWRLGVETTAD 676 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~g--ilLI~DEV~TGfGRtG~~~a~e 676 (818)
.+.+++.|. .++..|++|.+ .+..|.+.+ +++|.++|+++| +++|+|.+++ +|.. ++
T Consensus 137 --~~~l~~~l~--------~~TrlV~~Etp-sNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a----~p~~--~~ 195 (395)
T PRK08114 137 --GADIAKLIQ--------PNTKVVFLESP-GSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA----AGVL--FK 195 (395)
T ss_pred --HHHHHHhcC--------CCceEEEEECC-CCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc----cccc--cC
Confidence 144566664 35689999997 788888887 999999999985 9999999984 2322 33
Q ss_pred ccCCCCcEEE--ecccccCCc-cccceeecchHHHhhccCChH-----------------------HHH------HHHHH
Q 003466 677 LLGCVPDIAC--YGKLLTGGV-IPLAATLATNAVFDSFVGDSK-----------------------LWD------LELIQ 724 (818)
Q Consensus 677 ~~gv~PDivt--lgKgLggGy-~PlsAvl~~~~i~~~l~~~~~-----------------------~~~------~~l~~ 724 (818)
-...-.|+++ ..|.|+|.- .=.|+++.+++.++.+..... .++ ..+.+
T Consensus 196 pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~ 275 (395)
T PRK08114 196 ALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAE 275 (395)
T ss_pred HHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 3333478875 679888631 224456667766553321100 111 23455
Q ss_pred HHHcCCCeeEEE------------------eeeeEEEEEEec
Q 003466 725 QISSHRTVQRVV------------------ALGTLCAIELQA 748 (818)
Q Consensus 725 ~l~~~~~v~~vr------------------g~Gl~~~iel~~ 748 (818)
.|+.||.|..|. |.|.|+.|++..
T Consensus 276 ~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 276 WLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK 317 (395)
T ss_pred HHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence 678888876663 678899999963
No 323
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=98.42 E-value=7.7e-06 Score=91.41 Aligned_cols=163 Identities=18% Similarity=0.223 Sum_probs=98.2
Q ss_pred EEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcE---EEeccccc-CCc
Q 003466 620 IGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDI---ACYGKLLT-GGV 695 (818)
Q Consensus 620 iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDi---vtlgKgLg-gGy 695 (818)
+.+|++.-. ++-.|.+. +.+.+++|.+.|+ ++++|+||++.-|.. .. .........|.+ -+|||.+| .|
T Consensus 148 ~~li~i~nP-~NPTG~~~-~~~~l~~l~~~~~--~~~vivDeay~~~~~-~~-s~~~~~~~~~~~iv~~S~SK~~~l~G- 220 (354)
T PRK04635 148 AKLVFICNP-NNPTGTVI-DRADIEQLIEMTP--DAIVVVDEAYIEFCP-EY-SVADLLASYPNLVVLRTLSKAFALAG- 220 (354)
T ss_pred CCEEEEeCC-CCCCCccC-CHHHHHHHHHhCC--CcEEEEeCchHhhcc-Cc-chHHHHhhCCCEEEEechHHHhhhhH-
Confidence 344444443 78888877 5566666666554 599999999977632 11 111111112333 38999987 66
Q ss_pred cccceeecchHHHhhccCCh------H--------HH------------------HHHHHHHHHcCCCeeEEEeeeeEEE
Q 003466 696 IPLAATLATNAVFDSFVGDS------K--------LW------------------DLELIQQISSHRTVQRVVALGTLCA 743 (818)
Q Consensus 696 ~PlsAvl~~~~i~~~l~~~~------~--------~~------------------~~~l~~~l~~~~~v~~vrg~Gl~~~ 743 (818)
+-+|.+++++++++.+.... . .+ ++.+.+.|++++.+.-....|.++-
T Consensus 221 lRlG~~i~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~ 300 (354)
T PRK04635 221 ARCGFTLANEELIEILMRVIAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVL 300 (354)
T ss_pred HHHhhhhCCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEE
Confidence 57788999998887653210 0 00 0123344555553322233455444
Q ss_pred EEEecCcccCCCchHHHHHHHHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 744 IELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 744 iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
+.+. + +..+.+.|.++||.++.. ++.+|++. -+++|+++++++|++
T Consensus 301 ~~~~-~----------~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~---~~~e~~~~l~~al~~ 351 (354)
T PRK04635 301 AKFD-D----------VDAVFKALWDAGIVARAYKDPRLANCIRFSF---SNRAETDKLIGLIRN 351 (354)
T ss_pred EECC-C----------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHHHHHHHHHHHHH
Confidence 4442 1 345778899999999863 25788885 468999999988864
No 324
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.41 E-value=6.3e-06 Score=93.18 Aligned_cols=221 Identities=19% Similarity=0.185 Sum_probs=133.4
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
...++....|+++|+++-+. +.++.++||-.|+-+++.... +.| ..||..+..|+|
T Consensus 51 R~gnPt~~~le~~la~Le~g---~~a~~~~SGmaAi~~~l~~ll-----~~G----------------d~iv~~~~~Y~~ 106 (386)
T PF01053_consen 51 RYGNPTVRALEQRLAALEGG---EDALLFSSGMAAISAALLALL-----KPG----------------DHIVASDDLYGG 106 (386)
T ss_dssp TTC-HHHHHHHHHHHHHHT----SEEEEESSHHHHHHHHHHHHS------TT----------------BEEEEESSSSHH
T ss_pred ccccccHHHHHHHHHHhhcc---cceeeccchHHHHHHHHHhhc-----ccC----------------CceEecCCccCc
Confidence 45588899999999998773 688889999999988888652 222 368999999988
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
.... +.- +....|+ .+.|-|. .+
T Consensus 107 t~~~-~~~-------------~l~~~gv------------------------------~v~~~d~-------~d------ 129 (386)
T PF01053_consen 107 TYRL-LEE-------------LLPRFGV------------------------------EVTFVDP-------TD------ 129 (386)
T ss_dssp HHHH-HHH-------------CHHHTTS------------------------------EEEEEST-------TS------
T ss_pred chhh-hhh-------------hhcccCc------------------------------EEEEeCc-------hh------
Confidence 3211 110 0000000 0112221 00
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcC-CcEEEeecccCcccCCccchhcc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRK-IPVIFDEVFTGFWRLGVETTADL 677 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~g-ilLI~DEV~TGfGRtG~~~a~e~ 677 (818)
.+.+++.++ .++.+|++|+. .+...-++. ++++.++|+++| +++|+|...... ..+.-
T Consensus 130 --~~~l~~~l~--------~~t~~v~~Esp-sNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~atp------~~~~p 188 (386)
T PF01053_consen 130 --LEALEAALR--------PNTKLVFLESP-SNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFATP------YNQNP 188 (386)
T ss_dssp --HHHHHHHHC--------TTEEEEEEESS-BTTTTB-------HHHHHHHHHHTTT-EEEEECTTTHT------TTC-G
T ss_pred --HHHHHhhcc--------ccceEEEEEcC-CCccccccc----HHHHHHHHHHhCCceEEeeccccce------eeecc
Confidence 256777775 38899999996 554433333 999999999999 999999987421 12222
Q ss_pred cCCCCcEEE--ecccccC-Cccccceeecc--hHHHhhccCChH-----------------------HHH------HHHH
Q 003466 678 LGCVPDIAC--YGKLLTG-GVIPLAATLAT--NAVFDSFVGDSK-----------------------LWD------LELI 723 (818)
Q Consensus 678 ~gv~PDivt--lgKgLgg-Gy~PlsAvl~~--~~i~~~l~~~~~-----------------------~~~------~~l~ 723 (818)
+..-.|+++ +.|-++| |=.=.|+++++ +++++.+..... .++ ..+.
T Consensus 189 L~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA 268 (386)
T PF01053_consen 189 LELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTLPLRMERQNENAEALA 268 (386)
T ss_dssp GGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 222368774 7798875 21234566654 466654432111 111 2355
Q ss_pred HHHHcCCCeeEEE------------------eeeeEEEEEEecCcccCCCchHHHHHHHHHHH
Q 003466 724 QQISSHRTVQRVV------------------ALGTLCAIELQAAGCNAGYGSLYAASLLKKLR 768 (818)
Q Consensus 724 ~~l~~~~~v~~vr------------------g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~ 768 (818)
+.|+.||.|..|. |.|.|++|++.... ..+..|.+.|.
T Consensus 269 ~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~-------~~~~~f~~~l~ 324 (386)
T PF01053_consen 269 EFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE-------EAARRFLDALK 324 (386)
T ss_dssp HHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH-------HHHHHHHHH-S
T ss_pred HHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch-------hhhHhHHhhhh
Confidence 6678899998886 66679999998651 24566666653
No 325
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=98.40 E-value=4e-06 Score=96.58 Aligned_cols=185 Identities=15% Similarity=0.118 Sum_probs=105.8
Q ss_pred HHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCcc
Q 003466 422 ARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTT 501 (818)
Q Consensus 422 ~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~ 501 (818)
.+++.+++...... ..+...+|+++|+++++. +.+++++||++|+..|++.+.+.+..+.+.
T Consensus 47 ~~a~~~~~~~~~~~-----~G~~~~~fe~~lA~~~g~---~~~v~~~sGt~al~~aL~al~~~~~~~~~~---------- 108 (438)
T PRK15407 47 LQNLVDASLDFWLT-----TGRFNDAFEKKLAEFLGV---RYALLVNSGSSANLLAFSALTSPKLGDRAL---------- 108 (438)
T ss_pred HHHHHHHHHhCccc-----CChhHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHHHhhccccccCC----------
Confidence 45555555542221 134577899999999873 689999999999999999762222111110
Q ss_pred ccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecC-cchhhhhccccccccc
Q 003466 502 EKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSL-PEWLYSKIVEHKDITF 580 (818)
Q Consensus 502 ~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~-P~~~~~~~~~~~~~~~ 580 (818)
.....||+...+|.+... ++...|... ..+.+ |. ++
T Consensus 109 --~pGd~VIv~~~t~~a~~~-~v~~~G~~p----------------------------v~vdvd~~------------~~ 145 (438)
T PRK15407 109 --KPGDEVITVAAGFPTTVN-PIIQNGLVP----------------------------VFVDVELP------------TY 145 (438)
T ss_pred --CCCCEEEECCCCcHHHHH-HHHHcCCEE----------------------------EEEecCCC------------cC
Confidence 112468888877765432 222211110 00000 00 01
Q ss_pred cCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEe
Q 003466 581 CSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFD 660 (818)
Q Consensus 581 nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~D 660 (818)
+ + | .+.+++.+. .++.+|++.+. .| .+..+++|+++|++||+++|.|
T Consensus 146 ~-i--------d--------~~~le~~i~--------~~tkaVi~~~~-~G-------~p~dl~~I~~la~~~gi~vIeD 192 (438)
T PRK15407 146 N-I--------D--------ASLLEAAVS--------PKTKAIMIAHT-LG-------NPFDLAAVKAFCDKHNLWLIED 192 (438)
T ss_pred C-c--------C--------HHHHHHHcC--------cCCeEEEEeCC-CC-------ChhhHHHHHHHHHHCCCEEEEE
Confidence 1 0 0 145555553 35678888875 33 2346899999999999999999
Q ss_pred ecccCcccCCccchhcccCCCCcEEEec----ccccCCccccceeecchH
Q 003466 661 EVFTGFWRLGVETTADLLGCVPDIACYG----KLLTGGVIPLAATLATNA 706 (818)
Q Consensus 661 EV~TGfGRtG~~~a~e~~gv~PDivtlg----KgLggGy~PlsAvl~~~~ 706 (818)
++|+ +|-+ +.-...|-..|+.+|| |.++.| ..|+++++++
T Consensus 193 aa~a-~G~~---~~g~~~G~~gd~~~fSf~~~k~~~~g--eGG~l~t~d~ 236 (438)
T PRK15407 193 NCDA-LGST---YDGRMTGTFGDIATLSFYPAHHITMG--EGGAVFTNDP 236 (438)
T ss_pred Cccc-hhhh---cCCeeeeccCceEEEeCCCCCCcccc--CceEEEECCH
Confidence 9994 4322 1111223334777776 556654 3466777543
No 326
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=98.40 E-value=9e-05 Score=81.36 Aligned_cols=185 Identities=18% Similarity=0.225 Sum_probs=107.9
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCC-ccchhcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLG-VETTADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG-~~~a~e~~gv 680 (818)
+.||+.+.+ +....-|++.| ++-+|-+. ..+.|++|.+||.+||+.+|.||||.-+=-.| +.+.+. .+
T Consensus 148 ~~LE~~~~~------~~vkl~iLCnP--HNP~Grvw-t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a--~l 216 (388)
T COG1168 148 DALEKAFVD------ERVKLFILCNP--HNPTGRVW-TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA--SL 216 (388)
T ss_pred HHHHHHHhc------CCccEEEEeCC--CCCCCccc-cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchh--hc
Confidence 678888863 22245777778 67777554 99999999999999999999999999774445 333322 23
Q ss_pred CCc-----EEEe--ccccc-CCccccceeecc-hHHHhhccCC----h----H---------------HHHHHHHH----
Q 003466 681 VPD-----IACY--GKLLT-GGVIPLAATLAT-NAVFDSFVGD----S----K---------------LWDLELIQ---- 724 (818)
Q Consensus 681 ~PD-----ivtl--gKgLg-gGy~PlsAvl~~-~~i~~~l~~~----~----~---------------~~~~~l~~---- 724 (818)
.|+ |.|+ ||+.. .| +-.|.++.+ +++.+.+... . . .|-+++++
T Consensus 217 s~~~a~~~it~~saSKtFNlaG-L~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~ 295 (388)
T COG1168 217 SERFADNSITLTSASKTFNLAG-LKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKD 295 (388)
T ss_pred ChhhhcceEEEeeccccccchh-hhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 333 3343 58765 45 566666654 4442322110 0 0 12222222
Q ss_pred -------HH-HcCCCeeEEEeeeeEEEE-EEecCcccCCCchHHHHHHHHHHHhC-CceEee------cC-CEEEEECCC
Q 003466 725 -------QI-SSHRTVQRVVALGTLCAI-ELQAAGCNAGYGSLYAASLLKKLRED-GVYMRP------LG-NVIYLMCGP 787 (818)
Q Consensus 725 -------~l-~~~~~v~~vrg~Gl~~~i-el~~~~~~~~~~~~~a~~~~~~l~e~-Gvlv~p------~g-~~ir~~ppl 787 (818)
.+ +..|.+.-..-.|..+.. ++..- ..+ ...+.+.|+++ +|.+.+ .| +-+|+. +
T Consensus 296 N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l----~l~---d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~ 366 (388)
T COG1168 296 NRDYVADFLNKHLPGVKVTEPQGTYLAWLDCREL----GLD---DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--F 366 (388)
T ss_pred HHHHHHHHHHhhCCCcEEecCCCceeeeeecccc----CCC---hHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--c
Confidence 22 234777666677776654 33221 111 12345555533 455543 34 444443 3
Q ss_pred CChHHHHHHHHHHHHHHHHH
Q 003466 788 CSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 788 ~~t~edId~~~~~l~~~l~~ 807 (818)
..+.+-+++++++|.++++.
T Consensus 367 acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 367 ACPRAILEEALERLKRALKK 386 (388)
T ss_pred CCCHHHHHHHHHHHHHHHhc
Confidence 46678888888888887764
No 327
>CHL00175 minD septum-site determining protein; Validated
Probab=98.39 E-value=3.6e-06 Score=91.04 Aligned_cols=88 Identities=14% Similarity=0.121 Sum_probs=65.3
Q ss_pred CCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCCC--------
Q 003466 221 EILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGLV-------- 292 (818)
Q Consensus 221 ~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~~-------- 292 (818)
||+|||.+..|+... ........ -.+|+|+.....++.++...++.++..+....++|+|++...
T Consensus 127 yD~VIiDtpp~~~~~------~~~~l~~a-D~viiV~~p~~~si~~~~~~~~~l~~~~~~~~~lvvN~~~~~~~~~~~~~ 199 (281)
T CHL00175 127 YDYILIDCPAGIDVG------FINAIAPA-QEAIVVTTPEITAIRDADRVAGLLEANGIYNVKLLVNRVRPDMIQANDMM 199 (281)
T ss_pred CCEEEEeCCCCCCHH------HHHHHHhc-CeeEEEcCCChHHHHHHHHHHHHHHHcCCCceEEEEeccChhhhhhhccc
Confidence 999999998765322 22222232 358889999999999999999999988877789999998321
Q ss_pred CHHHHHHhhcCCCCEEe-cCCCCCCC
Q 003466 293 NEVPLMSYLRNRVPVLV-LPPLPQDS 317 (818)
Q Consensus 293 ~~~~l~~~~~~~~pvlg-iP~~~~~~ 317 (818)
..+.+++.+ +.|+++ ||+.+.+.
T Consensus 200 ~~~~l~~~~--~~~~~~~Ip~d~~v~ 223 (281)
T CHL00175 200 SVRDVQEML--GIPLLGAIPEDENVI 223 (281)
T ss_pred cHHHHHHHh--CCCeEEEccCCHhHH
Confidence 234566777 899999 99877643
No 328
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=98.39 E-value=1.7e-05 Score=79.12 Aligned_cols=89 Identities=15% Similarity=0.077 Sum_probs=62.6
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhh-hCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCCC------
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYR-PFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGLV------ 292 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~-~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~~------ 292 (818)
.||+|||-+..++. .....++. ..---+|+|+....-++..+...++.+++.+.++.|+|+|++...
T Consensus 67 ~yD~VIiD~pp~~~------~~~~~~~~~~~ad~viiV~~p~~~s~~~~~~~~~~l~~~~~~~~gvv~N~~~~~~~~~~~ 140 (169)
T cd02037 67 ELDYLVIDMPPGTG------DEHLTLAQSLPIDGAVIVTTPQEVALDDVRKAIDMFKKVNIPILGVVENMSYFVCPHCGK 140 (169)
T ss_pred CCCEEEEeCCCCCc------HHHHHHHhccCCCeEEEEECCchhhHHHHHHHHHHHHhcCCCeEEEEEcCCcccCCCCCC
Confidence 49999999977532 11223332 233557888888888999999999999999999999999997210
Q ss_pred -----CHHHHHHhhcC-CCCEEe-cCCCC
Q 003466 293 -----NEVPLMSYLRN-RVPVLV-LPPLP 314 (818)
Q Consensus 293 -----~~~~l~~~~~~-~~pvlg-iP~~~ 314 (818)
....+++..+. +.|++| ||+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~~ 169 (169)
T cd02037 141 KIYIFGKGGGEKLAEELGVPLLGKIPLDP 169 (169)
T ss_pred cccccCCccHHHHHHHcCCCEEEeccCCC
Confidence 11123333322 899999 99864
No 329
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=98.38 E-value=3.8e-05 Score=85.35 Aligned_cols=152 Identities=18% Similarity=0.284 Sum_probs=91.1
Q ss_pred EEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE---Eeccccc-CCccc
Q 003466 622 ALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA---CYGKLLT-GGVIP 697 (818)
Q Consensus 622 AVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv---tlgKgLg-gGy~P 697 (818)
.++.-| +.-.|.+.+ .++|.++|+ +++++|+||++..|.. .... ......+.++ +|||.+| .| +-
T Consensus 144 v~~~~P--~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~-~~~~--~~~~~~~~vi~l~S~SK~~~l~G-lR 212 (337)
T PRK03967 144 VFICSP--NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSG-KSLI--GLIDEYPNLILLRTFSKAFGLAG-IR 212 (337)
T ss_pred EEEeCC--CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcc-cchH--HHHhhCCCEEEEecchHhhcchh-hh
Confidence 445566 677787775 467777774 7999999999987731 1111 1111123433 7999998 78 79
Q ss_pred cceeecchHHHhhccCChH--------------HHH------H----------HHHHHHHcCCCeeEEEeeeeEEEEEEe
Q 003466 698 LAATLATNAVFDSFVGDSK--------------LWD------L----------ELIQQISSHRTVQRVVALGTLCAIELQ 747 (818)
Q Consensus 698 lsAvl~~~~i~~~l~~~~~--------------~~~------~----------~l~~~l~~~~~v~~vrg~Gl~~~iel~ 747 (818)
+|.+++++++++.+..... .+. + .+.+.+.++. ....|.++-+.+
T Consensus 213 iG~iv~~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~~~~- 287 (337)
T PRK03967 213 AGYAIANEEIIDALYRIKPPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEYA----YPSDANFLLLKL- 287 (337)
T ss_pred heeeecCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccCc----CCCCCcEEEEhH-
Confidence 9999999988876543210 110 0 0111122110 112233222211
Q ss_pred cCcccCCCchHHHHHHHHHHHhCCceEeecC----CEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 748 AAGCNAGYGSLYAASLLKKLREDGVYMRPLG----NVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 748 ~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g----~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
.+.+.|.++||++++.+ +.+|+... +.++.++++++|++.++
T Consensus 288 --------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 --------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG---KREENDEFIKALKEIKE 333 (337)
T ss_pred --------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 26788899999998632 56888754 46777888888876654
No 330
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.34 E-value=8.3e-06 Score=85.10 Aligned_cols=270 Identities=17% Similarity=0.140 Sum_probs=163.9
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCcc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTL 521 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~ 521 (818)
.+|...+-+.|++++| .+.+.+++..-||-.+++... .++.+.++.|+..|-+|+
T Consensus 60 kPpI~~F~~dlaeFlg---~D~~R~t~GARe~KfavMhal----------------------~~~gd~vV~D~~aHYtty 114 (382)
T COG1103 60 KPPIKDFLEDLAEFLG---MDEVRVTAGAREAKFAVMHAL----------------------CKEGDWVVVDSLAHYTTY 114 (382)
T ss_pred CCcHHHHHHHHHHHhC---CceeeecccchhhHHHHHHHh----------------------ccCCCEEEEcCcchHHHH
Confidence 5677888888999998 589999999889888777754 334578999999999887
Q ss_pred ccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHH
Q 003466 522 GAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYS 601 (818)
Q Consensus 522 ~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~ 601 (818)
-|.-..|...+- .|.. ..|+. .. ....|.
T Consensus 115 vAAEragl~v~e----------------Vp~t---------g~Pey--------------------~i------~~e~y~ 143 (382)
T COG1103 115 VAAERAGLNVAE----------------VPNT---------GYPEY--------------------KI------TPEGYA 143 (382)
T ss_pred HHHHhcCCeEEe----------------cCCC---------CCCce--------------------Ee------cHHHHH
Confidence 766555432111 1110 01111 00 012345
Q ss_pred HHHHHHHhcCCCCCCCCcEE-EEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIG-ALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iA-AVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
+.+++..+ ++++.++ |+++-| .+.-|.... -+++.++|+++|++|++.-+.| .||.- . ..-.+
T Consensus 144 ~viee~~~-----~~g~~~~lallTh~--Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt-~Grmp---v-s~ke~ 207 (382)
T COG1103 144 EVIEEVKD-----EGGDPPALALLTHV--DGEYGNLAD----AKKVAKICREYGVPLLLNCAYT-VGRMP---V-SGKEI 207 (382)
T ss_pred HHHHHHHh-----ccCCCceEEEEecc--CCCcCCchh----hHHHHHHHHHcCCceEeeccee-ecccc---c-ccccc
Confidence 66776665 3445566 555555 577787665 7899999999999999998886 45542 2 22346
Q ss_pred CCcEEEec--ccccCCccccceeecchHHHhhccCCh-H----------------------------------HHHHHH-
Q 003466 681 VPDIACYG--KLLTGGVIPLAATLATNAVFDSFVGDS-K----------------------------------LWDLEL- 722 (818)
Q Consensus 681 ~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l~~~~-~----------------------------------~~~~~l- 722 (818)
.+|+++=| |+++.. -|+|...++++..+.....+ + .|.++.
T Consensus 208 g~DFiVgSGHKsmAAs-~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~ 286 (382)
T COG1103 208 GADFIVGSGHKSMAAS-APIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVE 286 (382)
T ss_pred CCCEEEecCccchhcc-CCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHH
Confidence 78988765 788765 49999999999887653332 1 222221
Q ss_pred -----HHHHHcCCCeeEEEeeee------EEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEE-CCCCCh
Q 003466 723 -----IQQISSHRTVQRVVALGT------LCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLM-CGPCSS 790 (818)
Q Consensus 723 -----~~~l~~~~~v~~vrg~Gl------~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~-ppl~~t 790 (818)
.+.+++.+. +...|- ++-++-..-..-.........-+.+.|.++||+-...|.+-.|. .-.-.+
T Consensus 287 kaR~fv~elEkigg---~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~svyGl~ 363 (382)
T COG1103 287 KARWFVAELEKIGG---VKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSVYGLS 363 (382)
T ss_pred HHHHHHHHHHHhhh---HHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEeecCC
Confidence 222333322 211221 11122110000000000112235678888888765545333333 335789
Q ss_pred HHHHHHHHHHHHHHHHH
Q 003466 791 PEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 791 ~edId~~~~~l~~~l~~ 807 (818)
.|+++..++++++.+++
T Consensus 364 ~Eqve~V~~afkeI~ek 380 (382)
T COG1103 364 WEQVEYVVDAFKEIAEK 380 (382)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988765
No 331
>PLN03032 serine decarboxylase; Provisional
Probab=98.32 E-value=0.00011 Score=82.98 Aligned_cols=179 Identities=9% Similarity=-0.022 Sum_probs=105.4
Q ss_pred ChhHHHHHHHHHhccCCCCCCcE--EEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 442 YEPALECAELLLQGVGKGWASRA--YFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v--~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
.+...+.-+.++++++.+ -+.+ +|+++|||||..|+..+ |.+.. ..+|.....-|-+
T Consensus 65 ~~~e~~v~~~ia~llg~~-~~~~~G~fTsGGTEaNl~al~~a-r~~~~-------------------~~~vi~s~~~H~S 123 (374)
T PLN03032 65 RQFEVGVLDWFARLWELE-KDEYWGYITTCGTEGNLHGILVG-REVFP-------------------DGILYASRESHYS 123 (374)
T ss_pred HHHHHHHHHHHHHHhCCC-CccCCEEEeCchHHHHHHHHHHH-HHhCC-------------------CcEEEeCCCceeH
Confidence 455666677777777643 1334 89999999999999998 53311 1356677777776
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
..-++...+... ..++..... .-|
T Consensus 124 v~kaa~~lg~~~----------------------------~~V~~d~~g-----------~id----------------- 147 (374)
T PLN03032 124 VFKAARMYRMEA----------------------------VKVPTLPSG-----------EID----------------- 147 (374)
T ss_pred HHHHHHHcCCCC----------------------------eEeeeCCCC-----------cCc-----------------
Confidence 655544433210 011110000 011
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCC-----cEEEeecccCcccCCccch
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKI-----PVIFDEVFTGFWRLGVETT 674 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gi-----lLI~DEV~TGfGRtG~~~a 674 (818)
.+.|++.|.+ ...+..+|++--. ..+.|.+.| +++|.++|++||+ .|.+|=++.|+ .. .+..
T Consensus 148 -~~~L~~~i~~-----~~~~~~lvv~tag-tt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~-~~-p~~~ 214 (374)
T PLN03032 148 -YDDLERALAK-----NRDKPAILNVNIG-TTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGL-MM-PFVS 214 (374)
T ss_pred -HHHHHHHHHH-----cCCCCEEEEEEec-CcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhh-hh-hccC
Confidence 2567777763 1224455555433 566788877 9999999999975 79999998653 21 1100
Q ss_pred -hc--ccCCCCcEEEec--ccccCCccccceeecchHHHhhc
Q 003466 675 -AD--LLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSF 711 (818)
Q Consensus 675 -~e--~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l 711 (818)
.. .+....|.++++ |-++.- .+.|+++.+++..+.+
T Consensus 215 ~~~~~~~~~~vDSis~s~HK~~g~P-~g~G~ll~r~~~~~~~ 255 (374)
T PLN03032 215 RAPEVTFRKPIGSVSVSGHKFLGCP-MPCGVALTRKKHVKAL 255 (374)
T ss_pred CCcccCCCcCCcEEEECcccccCCC-cCeEEEEEEchhhHhh
Confidence 00 011236777665 544434 5778888888776544
No 332
>PRK02769 histidine decarboxylase; Provisional
Probab=98.32 E-value=0.00017 Score=81.62 Aligned_cols=256 Identities=9% Similarity=0.054 Sum_probs=147.1
Q ss_pred ChhHHHHHHHHHhccCCCCCC-cEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 442 YEPALECAELLLQGVGKGWAS-RAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~-~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.+...+.-+.++++++.+.-+ ..+|+++|+|||..|+..+ |.+.. ...|.....-|.+.
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~a-r~~~~-------------------~~~ii~s~~~H~Sv 123 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLA-RELFP-------------------DGTLYYSKDTHYSV 123 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHH-HHhCC-------------------CcEEEeCCCceehH
Confidence 455566777778877643112 2588999999999999988 43311 13455556667665
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecC-cchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSL-PEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~-P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
.-++..-+.... .++. |+ . --|
T Consensus 124 ~ka~~~lg~~~~----------------------------~V~~~~~-g-----------~id----------------- 146 (380)
T PRK02769 124 SKIARLLRIKSR----------------------------VITSLPN-G-----------EID----------------- 146 (380)
T ss_pred HHHHHHcCCCCc----------------------------eeccCCC-C-----------cCc-----------------
Confidence 544433322100 0110 00 0 001
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcC---CcEEEeecccCcccCCc-----
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRK---IPVIFDEVFTGFWRLGV----- 671 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~g---ilLI~DEV~TGfGRtG~----- 671 (818)
.+.|++.|.+ ...++.+|++--+ ...-|.+.| +++|.++|++|| +.+++|=+|.|+ ..-.
T Consensus 147 -~~~L~~~i~~-----~~~~t~lvv~t~g-tt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg~-~~p~~~~~~ 214 (380)
T PRK02769 147 -YDDLISKIKE-----NKNQPPIIFANIG-TTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSGM-ILPFVNNPP 214 (380)
T ss_pred -HHHHHHHHHh-----CCCCcEEEEEEeC-CCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccce-eecccCccc
Confidence 2567777763 2334556666654 677888887 999999999998 699999999664 2210
Q ss_pred cchhcccCCCCcEEEec--ccccCCccccceeecchHHHhhccC-------------ChH-------H------------
Q 003466 672 ETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSFVG-------------DSK-------L------------ 717 (818)
Q Consensus 672 ~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l~~-------------~~~-------~------------ 717 (818)
.+.+.. ..|.++++ |-+++- .+.|+++.+++..+.+.. +++ +
T Consensus 215 ~~d~~~---~vDsis~s~HK~~~~P-~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~ 290 (380)
T PRK02769 215 PFSFAD---GIDSIAISGHKFIGSP-MPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGL 290 (380)
T ss_pred cCCccC---CCCEEEECCcccCCCC-CCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHH
Confidence 111111 46888765 655544 588889998877654411 011 0
Q ss_pred ---------HHHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCC
Q 003466 718 ---------WDLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPC 788 (818)
Q Consensus 718 ---------~~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~ 788 (818)
+.+.+.+.+++.+ +.-+. .-....+-|..+. ..+. +|..+.+.++.+++.....
T Consensus 291 ~~~~~~~~~la~~l~~~L~~~g-~~~~~-~p~~~~v~f~~~~----------~~~~-----~~w~l~~~~~~~hi~~~~~ 353 (380)
T PRK02769 291 RQRVQHCLDMAQYAVDRLQANG-IPAWR-NPNSITVVFPCPS----------ERIW-----KKWHLATSGNQAHIITMPH 353 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CEEEc-CCCceEEEEcCCC----------HHHH-----hCeeEcccCCEEEEEECCC
Confidence 0112334444332 21111 1112222333221 1121 6777777677788888888
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q 003466 789 SSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 789 ~t~edId~~~~~l~~~l~~ 807 (818)
+|.+.||.+++-|...+..
T Consensus 354 ~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 354 HNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 9999999999988877653
No 333
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=98.32 E-value=3.5e-06 Score=91.70 Aligned_cols=196 Identities=16% Similarity=0.145 Sum_probs=112.6
Q ss_pred CHHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccC
Q 003466 418 QIELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLG 497 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~ 497 (818)
||++.+|+.+.. .++-. -+..+...+|++++++++|. +.++|+.||+.||..|++...+ ++
T Consensus 8 ~~~m~~a~~~a~--~gd~~--Yg~D~~~~~l~~~i~~l~g~---e~a~f~~sGT~An~~al~~~~~-----~~------- 68 (290)
T PF01212_consen 8 TPAMLEAMAAAN--VGDDA--YGEDPTTARLEERIAELFGK---EAALFVPSGTMANQLALRAHLR-----PG------- 68 (290)
T ss_dssp -HHEEHHHHHTT--SB-CC--TTSSHHHHHHHHHHHHHHTS---SEEEEESSHHHHHHHHHHHHHH-----TT-------
T ss_pred CHHHHHHHHccc--cCCcc--cCCChhHHHHHHHHHHHcCC---CEEEEeCCCChHHHHHHHHHHh-----cC-------
Confidence 899999995443 22222 13467889999999999984 6888999999999999998731 11
Q ss_pred CCccccccceEEEEEcCC-CCCCccccc-cccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcccc
Q 003466 498 KDTTEKCIELKVLALKGS-YHGDTLGAM-EAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEH 575 (818)
Q Consensus 498 ~~~~~~~~r~~II~~~~s-YHG~t~~al-s~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~ 575 (818)
..||+-+.+ +|....++. .++|.. .+++|.....
T Consensus 69 ---------~~vi~~~~aHi~~~E~ga~~~~~G~~------------------------------~~~l~~~~~G----- 104 (290)
T PF01212_consen 69 ---------ESVICADTAHIHFDETGAIEELSGAK------------------------------LIPLPSDDDG----- 104 (290)
T ss_dssp ---------EEEEEETTEHHHHSSTTHHHHHTTCE------------------------------EEEEBECTGT-----
T ss_pred ---------CceeccccceeeeeccchhhHhcCcE------------------------------EEECCCcccC-----
Confidence 234444332 333333333 223221 1122211000
Q ss_pred ccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCC
Q 003466 576 KDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKI 655 (818)
Q Consensus 576 ~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gi 655 (818)
.-| .+.|++.+.... .+..++++|.+|-- ....|-.+++.+.+++|+++|++||+
T Consensus 105 ----~l~------------------~~~l~~~~~~~~--~h~~~~~~v~le~t-~~~~GG~~~s~~el~ai~~~a~~~gl 159 (290)
T PF01212_consen 105 ----KLT------------------PEDLEAAIEEHG--AHHPQPAVVSLENT-TELAGGTVYSLEELRAISELAREHGL 159 (290)
T ss_dssp ----BB-------------------HHHHHHHHHHHT--GTSGGEEEEEEESS-BTTTTSB---HHHHHHHHHHHHHHT-
T ss_pred ----CCC------------------HHHHHHHhhhcc--ccCCCccEEEEEec-CcCCCCeeCCHHHHHHHHHHHHhCce
Confidence 001 256677776421 13468999999975 55555556689999999999999999
Q ss_pred cEEEeecccCcccCCccc-----hhcccCCCCcEE--EecccccCCccccce-eecchHHHh
Q 003466 656 PVIFDEVFTGFWRLGVET-----TADLLGCVPDIA--CYGKLLTGGVIPLAA-TLATNAVFD 709 (818)
Q Consensus 656 lLI~DEV~TGfGRtG~~~-----a~e~~gv~PDiv--tlgKgLggGy~PlsA-vl~~~~i~~ 709 (818)
.|++| |- |...-- ....+----|++ ++.|+++. |.++ ++++++.++
T Consensus 160 ~lhmD----GA-Rl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~---~~Gavl~~~~~~i~ 213 (290)
T PF01212_consen 160 PLHMD----GA-RLANAAAALGVSLAEIAAGADSVSFGGTKNGGA---PGGAVLAGNKEFIA 213 (290)
T ss_dssp EEEEE----ET-THHHHHCHHHHHHHHHHTTSSEEEEETTSTT-S---SSEEEEEESHHHHH
T ss_pred EEEEe----hh-hHHHhhhcccccHHHHhhhCCEEEEEEEccccc---ccceEEEechHHHH
Confidence 99999 43 432210 011111235776 55565543 4555 456777554
No 334
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=98.31 E-value=6.7e-06 Score=87.33 Aligned_cols=102 Identities=11% Similarity=0.173 Sum_probs=71.9
Q ss_pred ChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHH
Q 003466 193 GDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYE 272 (818)
Q Consensus 193 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~ 272 (818)
..+.+.+.++.+.+. +|+|||.+.+|+..+. .......+ -||+|+.....++.++...++
T Consensus 97 ~~~~l~~~l~~l~~~-------------~D~viiD~p~~~~~~~------~~~l~~aD-~viiv~~~~~~s~~~~~~~~~ 156 (261)
T TIGR01968 97 TPEQMKKLVNELKEE-------------FDYVIIDCPAGIESGF------RNAVAPAD-EAIVVTTPEVSAVRDADRVIG 156 (261)
T ss_pred CHHHHHHHHHHHHHh-------------CCEEEEeCCCCcCHHH------HHHHHhCC-eEEEEcCCCcHHHHHHHHHHH
Confidence 445566666666554 9999999988765432 12222222 388899999999999999999
Q ss_pred HHHhCCCcEEEEEEccCCC--------CCHHHHHHhhcCCCCEEe-cCCCCCC
Q 003466 273 SLKLRGYDVVAVVFEDHGL--------VNEVPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 273 ~l~~~~~~v~gvi~N~~~~--------~~~~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
.++..+....++|+|++.. ...+.+++.+ +.|+++ ||+....
T Consensus 157 ~l~~~~~~~~~iviN~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Ip~~~~~ 207 (261)
T TIGR01968 157 LLEAKGIEKIHLIVNRLRPEMVKKGDMLSVDDVLEIL--SIPLIGVIPEDEAI 207 (261)
T ss_pred HHHHcCCCceEEEEeCcCchhcccccccCHHHHHHHh--CCceeEEccCCHHH
Confidence 9987776678999999732 1234556666 899999 9987654
No 335
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.29 E-value=0.00014 Score=83.06 Aligned_cols=200 Identities=14% Similarity=0.036 Sum_probs=108.6
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcc-------cCCccch
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFW-------RLGVETT 674 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfG-------RtG~~~a 674 (818)
+.+++.|.. .+..+++.+.+|=.+...|| .+.|...+++++++|++||+.||.|=++. +| |-..+..
T Consensus 164 d~Le~~I~~----~~~~~~~lV~a~itvn~~GG-qpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~~y~~ 237 (460)
T PRK13237 164 DKLQALIDE----VGAENIAYICLAVTVNLAGG-QPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREEGYQD 237 (460)
T ss_pred HHHHHHhcc----ccCCccCceEEEEecccCCC-eeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhcccccccCC
Confidence 667777763 23455555555533244445 55578899999999999999999998874 33 1111111
Q ss_pred hc------ccCCCCcEEEec--ccccCCcccc-ceeecc-hHHHhhccCC--------------hH--------------
Q 003466 675 AD------LLGCVPDIACYG--KLLTGGVIPL-AATLAT-NAVFDSFVGD--------------SK-------------- 716 (818)
Q Consensus 675 ~e------~~gv~PDivtlg--KgLggGy~Pl-sAvl~~-~~i~~~l~~~--------------~~-------------- 716 (818)
.. ..+--.|++||| |.++. |+ |+++++ +++++.++.. ++
T Consensus 238 ~~i~ei~~e~~s~aD~~t~S~~K~~~~---~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~ 314 (460)
T PRK13237 238 KSIKEIVHEMFSYADGCTMSGKKDCLV---NIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ 314 (460)
T ss_pred CcHhHHhhhccCcCcEEEEeCCCCCCC---CCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch
Confidence 00 011236887766 54443 33 445553 5555433211 01
Q ss_pred --HHH------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEe----------ec
Q 003466 717 --LWD------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMR----------PL 777 (818)
Q Consensus 717 --~~~------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~----------p~ 777 (818)
++. +.+.+.|.+.+....-...|.-+-++...-.++.+....-+..++..|+ +-||=.. |.
T Consensus 315 ~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~ 394 (460)
T PRK13237 315 YEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPK 394 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCC
Confidence 111 1234455555442111233444444433322233332233555666665 4454332 11
Q ss_pred --------CCEEEEECCC-CChHHHHHHHHHHHHHHHHHHHH
Q 003466 778 --------GNVIYLMCGP-CSSPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 778 --------g~~ir~~ppl-~~t~edId~~~~~l~~~l~~l~~ 810 (818)
-..+|+..|- +.|.+++|.+.+++....+..+.
T Consensus 395 ~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 436 (460)
T PRK13237 395 TGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRED 436 (460)
T ss_pred CCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhh
Confidence 1467887777 78999999999999988876553
No 336
>PLN02590 probable tyrosine decarboxylase
Probab=98.29 E-value=0.00026 Score=83.35 Aligned_cols=184 Identities=11% Similarity=0.029 Sum_probs=103.4
Q ss_pred EEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC-CCcEEE--ecccccCCcc
Q 003466 620 IGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC-VPDIAC--YGKLLTGGVI 696 (818)
Q Consensus 620 iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv-~PDivt--lgKgLggGy~ 696 (818)
..+|+.--- ....|.+-| +++|.++|++||+.|.+|=++.|+...-..+..-..|+ ..|=++ .=|-|.-. +
T Consensus 288 P~~VvaTaG-TT~tGaiDp----l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p-~ 361 (539)
T PLN02590 288 PFFICATVG-TTSSAAVDP----LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFAN-Q 361 (539)
T ss_pred cEEEEEEeC-CCCCcccCC----HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcC-c
Confidence 344444432 455677776 99999999999999999988877643332222222365 467554 45777666 5
Q ss_pred ccceeecchH--HH-------hhccCC-----------------hH---------------------------HHHHHHH
Q 003466 697 PLAATLATNA--VF-------DSFVGD-----------------SK---------------------------LWDLELI 723 (818)
Q Consensus 697 PlsAvl~~~~--i~-------~~l~~~-----------------~~---------------------------~~~~~l~ 723 (818)
+.|++++++. +. +++... ++ .+.+.+.
T Consensus 362 ~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~ 441 (539)
T PLN02590 362 TCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFE 441 (539)
T ss_pred CEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788887753 11 122110 00 0112234
Q ss_pred HHHHcCCCeeEEEe-eeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEe-e---cC-CEEEEEC-CCCChHHHHHH
Q 003466 724 QQISSHRTVQRVVA-LGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMR-P---LG-NVIYLMC-GPCSSPEVCSQ 796 (818)
Q Consensus 724 ~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~-p---~g-~~ir~~p-pl~~t~edId~ 796 (818)
+.+++.+.+.-+.. .-.++.+.+.+..............+.+++.+.|.+.. + .| ..||++. ....|++||+.
T Consensus 442 ~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~ 521 (539)
T PLN02590 442 DYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTE 521 (539)
T ss_pred HHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHH
Confidence 44555554332221 12233344432210000012345678888888886554 3 22 4667654 33467899999
Q ss_pred HHHHHHHHHHHHH
Q 003466 797 LLLKLYQRLEEFD 809 (818)
Q Consensus 797 ~~~~l~~~l~~l~ 809 (818)
+++.|.+...++.
T Consensus 522 ~~~~i~~~a~~~~ 534 (539)
T PLN02590 522 AWQIIQKHASKFT 534 (539)
T ss_pred HHHHHHHHHHHhc
Confidence 9999988766553
No 337
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.29 E-value=2.9e-05 Score=89.32 Aligned_cols=154 Identities=14% Similarity=0.071 Sum_probs=93.3
Q ss_pred CCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 439 ENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 439 ~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
...++...+++++|+++.+. +.++.++||++|+.+|+.... ..| ..||+....|+|
T Consensus 65 r~~~pt~~~le~~la~l~g~---~~~v~fsSG~~Ai~~al~~ll-----~~G----------------d~VI~~~~~y~~ 120 (437)
T PRK05613 65 RLTNPTVEALENRIASLEGG---VHAVAFASGQAAETAAILNLA-----GAG----------------DHIVTSPRLYGG 120 (437)
T ss_pred CccChHHHHHHHHHHHHhCC---CeEEEeCCHHHHHHHHHHHhc-----CCC----------------CEEEECCCccHH
Confidence 34578889999999998873 578888899999998886541 222 257777776665
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
........- ...|.. +..+..| +|
T Consensus 121 t~~~~~~~l--------------~~~Gi~-----------v~~vd~~---------------~d---------------- 144 (437)
T PRK05613 121 TETLFLVTL--------------NRLGIE-----------VTFVENP---------------DD---------------- 144 (437)
T ss_pred HHHHHHHHH--------------HhcCeE-----------EEEECCC---------------CC----------------
Confidence 311100000 000000 0000000 01
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhccc
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLL 678 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~ 678 (818)
.+.+++.|. .++.+|++|.. .+..|.+.+ +++|.++|+++|+++|+|.++. .|.. .--..+
T Consensus 145 --~e~l~~~l~--------~~tk~V~~e~~-~Np~~~v~d----i~~I~~la~~~gi~livD~t~a-~g~~---~~p~~~ 205 (437)
T PRK05613 145 --PESWQAAVQ--------PNTKAFFGETF-ANPQADVLD----IPAVAEVAHRNQVPLIVDNTIA-TAAL---VRPLEL 205 (437)
T ss_pred --HHHHHHhCC--------ccCeEEEEECC-CCCCCcccC----HHHHHHHHHHcCCeEEEECCCc-cccc---cChHHh
Confidence 145666664 24668888875 555566665 9999999999999999999983 3222 111234
Q ss_pred CCCCcEEE--ecccccC
Q 003466 679 GCVPDIAC--YGKLLTG 693 (818)
Q Consensus 679 gv~PDivt--lgKgLgg 693 (818)
| .|+++ +-|-++|
T Consensus 206 G--aDivv~S~~K~l~G 220 (437)
T PRK05613 206 G--ADVVVASLTKFYTG 220 (437)
T ss_pred C--CCEEEeeccceecC
Confidence 5 48875 5687775
No 338
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=98.28 E-value=0.00021 Score=78.26 Aligned_cols=298 Identities=14% Similarity=0.096 Sum_probs=164.0
Q ss_pred CHHHHHHHHHhhhhccc--ccCCCCCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhccccccc
Q 003466 418 QIELARDMGYTAARFGH--VMFPENVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVD 494 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~--~~~~~~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~ 494 (818)
.++..+|+.+++..... +....+.-....+.||.|.+-++.. ..+.|+.+++-++|.|.||... .++|+
T Consensus 80 s~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~L-----A~p~a--- 151 (447)
T KOG0259|consen 80 SQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSL-----ANPGA--- 151 (447)
T ss_pred CHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHh-----cCCCC---
Confidence 57788899998876422 1112234456678888877755432 1358999999999999999977 23322
Q ss_pred ccCCCccccccceEEEEEcCCCCCCcccccccc-CCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcc
Q 003466 495 FLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQ-APSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIV 573 (818)
Q Consensus 495 ~~~~~~~~~~~r~~II~~~~sYHG~t~~als~t-g~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~ 573 (818)
.|+.-+-+|- .+.+.+.. +...+.. + + +|+
T Consensus 152 -------------NILlPrPGfp--~Y~~~a~~~~lEVR~y--------------d------------l-LPe------- 182 (447)
T KOG0259|consen 152 -------------NILLPRPGFP--LYDTRAIYSGLEVRYY--------------D------------L-LPE------- 182 (447)
T ss_pred -------------ceecCCCCCc--hHHHhhhhcCceeEee--------------c------------c-cCc-------
Confidence 3444333331 11111111 0000000 0 0 111
Q ss_pred ccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhc
Q 003466 574 EHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNR 653 (818)
Q Consensus 574 ~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~ 653 (818)
..|+ .| ++.+|.+++ ..++|.||+.| ..-.|.+. +..-|++|.++|+++
T Consensus 183 -----------~~we--ID--------L~~veal~D-------ENT~AivviNP--~NPcGnVy-s~~HL~kiae~A~kl 231 (447)
T KOG0259|consen 183 -----------KDWE--ID--------LDGVEALAD-------ENTVAIVVINP--NNPCGNVY-SEDHLKKIAETAKKL 231 (447)
T ss_pred -----------ccce--ec--------hHHHHHhhc-------cCeeEEEEeCC--CCCCcccc-cHHHHHHHHHHHHHh
Confidence 0111 01 356666665 35788899999 46666655 899999999999999
Q ss_pred CCcEEEeecccCcccCC-c-cchhccc-CCCCcEEE--eccccc-CCccccceeecch--------HHHhhccCC-----
Q 003466 654 KIPVIFDEVFTGFWRLG-V-ETTADLL-GCVPDIAC--YGKLLT-GGVIPLAATLATN--------AVFDSFVGD----- 714 (818)
Q Consensus 654 gilLI~DEV~TGfGRtG-~-~~a~e~~-gv~PDivt--lgKgLg-gGy~PlsAvl~~~--------~i~~~l~~~----- 714 (818)
|+++|.|||..-+ ..| + +-....+ -+.|=|.+ ++|+-= =| .-+|-++..+ .+.+.+...
T Consensus 232 gi~vIaDEVY~~~-vfg~~pfvpmg~fssiVPVitlggisKrW~VPG-WRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~ 309 (447)
T KOG0259|consen 232 GIMVIADEVYGHT-VFGDKPFVPMGKFSSIVPVITLGGISKRWIVPG-WRLGWIALHDPRGVFRDTKVVQGIKNFLDIIP 309 (447)
T ss_pred CCeEEehhhccee-ecCCCCccchhhccccCceEeecccccccccCC-ceeeeEEEecccccccchHHHHHHHHHHhccC
Confidence 9999999997433 222 2 2222233 34554332 444321 23 4455554432 211111110
Q ss_pred --hH--------HHH--------HH----------HHHHHHcCCCee-EEEeeeeEEEEEEecCcccCCCchHHHHHHHH
Q 003466 715 --SK--------LWD--------LE----------LIQQISSHRTVQ-RVVALGTLCAIELQAAGCNAGYGSLYAASLLK 765 (818)
Q Consensus 715 --~~--------~~~--------~~----------l~~~l~~~~~v~-~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~ 765 (818)
.. +++ .. --+.|++.|.+. .++-.|.|+-..-.+-. ..++-..-..|++
T Consensus 310 ~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s--~~~~~~dD~dFc~ 387 (447)
T KOG0259|consen 310 GPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLS--LFPDIEDDVDFCQ 387 (447)
T ss_pred CccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchh--hhccccccHHHHH
Confidence 00 111 11 123456677766 67777766543211110 0001112345777
Q ss_pred HHH-hCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHHHH
Q 003466 766 KLR-EDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 766 ~l~-e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~ 809 (818)
+|. |+-+++-|+ .|-+|+. ++..++.+++++++|++.-.+-.
T Consensus 388 kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 388 KLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred HHhhhcceEEeccccccCCCeEEEE--EccChHHHHHHHHHHHHHHHhhh
Confidence 765 888999884 3767665 45778899999999988775543
No 339
>PLN02397 aspartate transaminase
Probab=98.28 E-value=8.8e-05 Score=85.16 Aligned_cols=169 Identities=12% Similarity=0.111 Sum_probs=97.2
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc---cchhccc-CCCCcEE---Eecccc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV---ETTADLL-GCVPDIA---CYGKLL 691 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~---~~a~e~~-gv~PDiv---tlgKgL 691 (818)
+..++++-. .++-.|.+. +.+.+++|.++|++||+++|.||++.+|.--|. ......+ .....++ +|||.+
T Consensus 194 ~~~~i~~~~-P~NPTG~v~-s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~ 271 (423)
T PLN02397 194 GSFVLLHAC-AHNPTGVDP-TPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNM 271 (423)
T ss_pred CCEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccC
Confidence 344444432 277778777 789999999999999999999999998832121 1111111 1111233 799999
Q ss_pred c-CCccccceee--c-chHHHh----hcc--------CChH--------HHH-----------------------HHHHH
Q 003466 692 T-GGVIPLAATL--A-TNAVFD----SFV--------GDSK--------LWD-----------------------LELIQ 724 (818)
Q Consensus 692 g-gGy~PlsAvl--~-~~~i~~----~l~--------~~~~--------~~~-----------------------~~l~~ 724 (818)
+ .| +-+|.++ + .+++++ .+. .... .+. +.+.+
T Consensus 272 ~~~G-~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~ 350 (423)
T PLN02397 272 GLYG-ERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYD 350 (423)
T ss_pred CCcc-ccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 67 6888873 3 443322 111 1000 010 01122
Q ss_pred HHHcCCC---eeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeecCCEEEEECCCCChHHHHHHHHHH
Q 003466 725 QISSHRT---VQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPLGNVIYLMCGPCSSPEVCSQLLLK 800 (818)
Q Consensus 725 ~l~~~~~---v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~g~~ir~~ppl~~t~edId~~~~~ 800 (818)
.+++++. ...+...|.++.+--.+ ..+++.|+ +.||++.+.+ |+... ..+++.|++++++
T Consensus 351 ~L~~~~~~~~~~~~~p~gg~fl~~~l~------------~~~~~~Ll~~~~V~v~~~~---Ri~~~-~~~~~~i~~~~~~ 414 (423)
T PLN02397 351 ALEARGSPGDWSHITKQIGMFSFTGLN------------KEQVDRMTKEYHIYMTRDG---RISMA-GLSSKNVPYLADA 414 (423)
T ss_pred HHHhcCCCCCCCcccCCceEEEecCCC------------HHHHHHHHHhCCEEECCCC---eEEEe-eCCHHHHHHHHHH
Confidence 3333321 22233445554442111 23677776 6699997655 45442 2778999999999
Q ss_pred HHHHHH
Q 003466 801 LYQRLE 806 (818)
Q Consensus 801 l~~~l~ 806 (818)
|.++++
T Consensus 415 i~~~~~ 420 (423)
T PLN02397 415 IHAVVT 420 (423)
T ss_pred HHHHHh
Confidence 999874
No 340
>PRK07671 cystathionine beta-lyase; Provisional
Probab=98.28 E-value=2.4e-05 Score=88.43 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=52.3
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE--EecccccCC--
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA--CYGKLLTGG-- 694 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgKgLggG-- 694 (818)
++.+|++|.. .+..|.... +++|.++|+++|+++|+||++.. +..+.. ...-.|++ .++|.++|-
T Consensus 134 ~tklV~le~P-~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~-~~~~~p-----~~~g~Divv~S~sK~l~G~~~ 202 (377)
T PRK07671 134 NTKAIYVETP-TNPLLKITD----IKKISTIAKEKGLLTIVDNTFMT-PYWQSP-----ISLGADIVLHSATKYLGGHSD 202 (377)
T ss_pred CCeEEEEECC-CCCCCcccC----HHHHHHHHHHcCCEEEEECCCCc-cccCCh-----hhhCCeEEEecCcccccCCcc
Confidence 5678888865 566666554 99999999999999999999842 122221 12234776 588999851
Q ss_pred ccccceeec-chHHHhhc
Q 003466 695 VIPLAATLA-TNAVFDSF 711 (818)
Q Consensus 695 y~PlsAvl~-~~~i~~~l 711 (818)
.+ .|++++ ++++++.+
T Consensus 203 ~~-~G~~v~~~~~l~~~~ 219 (377)
T PRK07671 203 VV-AGLVVVNSPELAEDL 219 (377)
T ss_pred ce-eEEEEeCcHHHHHHH
Confidence 11 222444 55665543
No 341
>PRK08637 hypothetical protein; Provisional
Probab=98.27 E-value=0.00027 Score=80.09 Aligned_cols=172 Identities=13% Similarity=0.144 Sum_probs=103.4
Q ss_pred EEEccccccCCCcccCCHHHHHHHHHHHHh-----cCCcEEEeecccCcccCCccch--h-cccCCCCcE--E---Eecc
Q 003466 623 LIIEPVVHAAGGMHMVDPLFQRILVKECQN-----RKIPVIFDEVFTGFWRLGVETT--A-DLLGCVPDI--A---CYGK 689 (818)
Q Consensus 623 VIvEPV~~g~gG~~~~p~~fl~~LreLc~~-----~gilLI~DEV~TGfGRtG~~~a--~-e~~gv~PDi--v---tlgK 689 (818)
++.-| ++-.|... +.+-+++|.++|++ |++++|.||++..|--.++... . ...+..+.+ + .+||
T Consensus 151 ~~~~P--~NPTG~~~-s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK 227 (388)
T PRK08637 151 ILNFP--NNPTGYTP-TEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATK 227 (388)
T ss_pred EEeCC--CCCCCCCC-CHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccc
Confidence 33445 78888666 88999999998875 9999999999987733343110 1 111223332 2 5899
Q ss_pred ccc-CCccccceeecc------hHHHhhccC-----------C-hH-------------HHHH-------H-------HH
Q 003466 690 LLT-GGVIPLAATLAT------NAVFDSFVG-----------D-SK-------------LWDL-------E-------LI 723 (818)
Q Consensus 690 gLg-gGy~PlsAvl~~------~~i~~~l~~-----------~-~~-------------~~~~-------~-------l~ 723 (818)
..+ .| +-+|.+++. +++++.+.. . +. .+.+ . +.
T Consensus 228 ~~~~pG-lRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~ 306 (388)
T PRK08637 228 EEFVWG-FRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTK 306 (388)
T ss_pred cCCCcc-cceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 755 45 788888743 455544321 0 00 0100 0 11
Q ss_pred HHHHcCC---CeeEEE-eeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEeecC-CEEEEECCCCChHHHHHHH
Q 003466 724 QQISSHR---TVQRVV-ALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMRPLG-NVIYLMCGPCSSPEVCSQL 797 (818)
Q Consensus 724 ~~l~~~~---~v~~vr-g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~p~g-~~ir~~ppl~~t~edId~~ 797 (818)
+.++.++ .+.-.. ..|+++-+.+. . ..+.++++.|+ ++||.+.+.+ +.+|+.... .+++++++.
T Consensus 307 ~~l~~~~~~~~~~~~~~~~g~~~~~~l~-~--------~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~-~~~~~i~~~ 376 (388)
T PRK08637 307 EVLYDGKYDDAWQAYPFNSGYFMCLKLK-G--------VDAEELRVHLLEKYGIGTIALNETDLRIAFSC-VEEEDIPEL 376 (388)
T ss_pred HHHHhhCCCCCcccccccceEEEEecCC-h--------HHHHHHHHHHhhhcceEEEeccCCceEEEeec-CCHHHHHHH
Confidence 2222331 122222 23555555553 1 23567888886 6799887644 568887765 678999999
Q ss_pred HHHHHHHHHHH
Q 003466 798 LLKLYQRLEEF 808 (818)
Q Consensus 798 ~~~l~~~l~~l 808 (818)
+++|.++++.+
T Consensus 377 ~~~l~~~~~~~ 387 (388)
T PRK08637 377 FDSIYKAIKDL 387 (388)
T ss_pred HHHHHHHHHhc
Confidence 99999888654
No 342
>PRK05939 hypothetical protein; Provisional
Probab=98.27 E-value=2.2e-05 Score=89.34 Aligned_cols=82 Identities=12% Similarity=0.157 Sum_probs=55.6
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCV 681 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~ 681 (818)
+.+++.+. +++.+|++|.+ .+..|.+.+ +++|.++|++||+++|+|++++.. .. ++-...-
T Consensus 122 e~l~~~l~--------~~tklV~vesp-~NptG~v~d----l~~I~~la~~~gi~livD~t~a~~----~~--~~~~~~g 182 (397)
T PRK05939 122 QNVAAAIR--------PNTRMVFVETI-ANPGTQVAD----LAGIGALCRERGLLYVVDNTMTSP----WL--FRPKDVG 182 (397)
T ss_pred HHHHHhCC--------CCCeEEEEECC-CCCCCCHHh----HHHHHHHHHHcCCEEEEECCcccc----cc--cCccccC
Confidence 45666553 35678999987 777787654 999999999999999999998421 11 1111223
Q ss_pred CcEE--EecccccC-Cccccceeec
Q 003466 682 PDIA--CYGKLLTG-GVIPLAATLA 703 (818)
Q Consensus 682 PDiv--tlgKgLgg-Gy~PlsAvl~ 703 (818)
.|++ .++|.++| | --++.+++
T Consensus 183 aDivv~S~sK~~~g~g-~~igg~v~ 206 (397)
T PRK05939 183 ASLVINSLSKYIAGHG-NALGGAVT 206 (397)
T ss_pred CEEEEecCeecccCCC-CeEEEEEe
Confidence 5766 68899986 4 33444444
No 343
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.26 E-value=4e-05 Score=88.16 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=86.3
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++...+|+++|+++.+. +.+++++||++|+..|+...+ +.| ..||+....|++.
T Consensus 61 ~~~p~~~~le~~lA~l~g~---~~av~~sSGt~Al~~al~~ll-----~~G----------------d~Vi~~~~~y~~t 116 (433)
T PRK08134 61 ISNPTVAVLEERVAALEGG---VGAIATASGQAALHLAIATLM-----GAG----------------SHIVASSALYGGS 116 (433)
T ss_pred CcChHHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHHh-----CCC----------------CEEEEeCCccHHH
Confidence 4567889999999999874 468999999999999987542 122 2678877777763
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
. ..+... .. + .|.. +.|-|.+ |
T Consensus 117 ~-~~~~~~-l~--~----------~Gi~------------------------------v~~vd~~-------d------- 138 (433)
T PRK08134 117 H-NLLHYT-LR--R----------FGIE------------------------------TTFVKPG-------D------- 138 (433)
T ss_pred H-HHHHHH-Hh--h----------CCeE------------------------------EEEECCC-------C-------
Confidence 2 111100 00 0 0000 0011110 0
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT 664 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T 664 (818)
.+.+++.|. .++.+|++|.+ .+..|.+.+ +++|.++|++||+++|+|.+|.
T Consensus 139 -~~~l~~~i~--------~~TklV~~e~~-~np~g~v~D----i~~I~~la~~~gi~livD~t~a 189 (433)
T PRK08134 139 -IDGWRAAIR--------PNTRLLFGETL-GNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFT 189 (433)
T ss_pred -HHHHHHhcC--------CCCeEEEEECC-CcccCcccC----HHHHHHHHHHcCCEEEEECCCc
Confidence 145666664 35678999986 777777776 9999999999999999999984
No 344
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.23 E-value=7.2e-05 Score=85.83 Aligned_cols=152 Identities=14% Similarity=0.087 Sum_probs=96.2
Q ss_pred CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 441 VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 441 ~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.++...+|+++|+++.+. ..++.++||..|+..++..++ +.| ..||+....|.|..
T Consensus 59 ~nPtv~~lE~~la~leg~---~~av~~~SG~aAi~~al~all-----~~G----------------D~VI~~~~~Y~~T~ 114 (432)
T PRK06702 59 GNPTLAAFEQKLAELEGG---VGAVATASGQAAIMLAVLNIC-----SSG----------------DHLLCSSTVYGGTF 114 (432)
T ss_pred CCcHHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHHHhc-----CCC----------------CEEEECCCchHHHH
Confidence 367889999999998874 578889999999999998541 223 26888888887643
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
.. +... . ...|.. +.|-|. ..|
T Consensus 115 ~~-~~~~---l----------~~~Gi~------------------------------v~~vd~------~~d-------- 136 (432)
T PRK06702 115 NL-FGVS---L----------RKLGID------------------------------VTFFNP------NLT-------- 136 (432)
T ss_pred HH-HHHH---H----------HHCCCE------------------------------EEEECC------CCC--------
Confidence 21 1100 0 000000 001110 000
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
.+.+++.|. .+..+|++|.. ....+.++. +++|.++|++||+++|+|++.. ....++-+..
T Consensus 137 ~~~l~~~I~--------~~Tk~I~~e~p-gnP~~~v~D----i~~I~~iA~~~gi~livD~T~~------tP~~~~pl~~ 197 (432)
T PRK06702 137 ADEIVALAN--------DKTKLVYAESL-GNPAMNVLN----FKEFSDAAKELEVPFIVDNTLA------TPYLCQAFEH 197 (432)
T ss_pred HHHHHHhCC--------cCCeEEEEEcC-CCccccccC----HHHHHHHHHHcCCEEEEECCCC------chhhCChhhc
Confidence 145666664 35678999975 554554444 9999999999999999999972 2333443333
Q ss_pred CCcEE--EecccccC
Q 003466 681 VPDIA--CYGKLLTG 693 (818)
Q Consensus 681 ~PDiv--tlgKgLgg 693 (818)
-.||+ .++|-++|
T Consensus 198 GADIvv~S~TKy~~G 212 (432)
T PRK06702 198 GANIIVHSTTKYIDG 212 (432)
T ss_pred CCCEEEEccccccCC
Confidence 46766 58897775
No 345
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.23 E-value=0.00014 Score=85.21 Aligned_cols=80 Identities=18% Similarity=0.272 Sum_probs=55.6
Q ss_pred cEEEEE-EccccccCCCcccCCHHHHHHHHHHHHh--cCCcEEEeecccCcccCCccchhcccCCCCc----EEEecccc
Q 003466 619 CIGALI-IEPVVHAAGGMHMVDPLFQRILVKECQN--RKIPVIFDEVFTGFWRLGVETTADLLGCVPD----IACYGKLL 691 (818)
Q Consensus 619 ~iAAVI-vEPV~~g~gG~~~~p~~fl~~LreLc~~--~gilLI~DEV~TGfGRtG~~~a~e~~gv~PD----ivtlgKgL 691 (818)
++.+|+ +-| ++-.|.+. +.+.+++|.++|++ +|+++|.|||+..|. +.+.. .....|| +-+|||..
T Consensus 241 ~tkai~l~nP--~NPTG~v~-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~--~~~~s--~~~~~~~~~I~v~SfSK~f 313 (527)
T PRK09275 241 SIKALFLVNP--SNPPSVAM-SDESLEKIADIVNEKRPDLMIITDDVYGTFV--DDFRS--LFAVLPYNTILVYSFSKYF 313 (527)
T ss_pred CCCEEEEeCC--cCCcCCCC-CHHHHHHHHHHHHhcCCCcEEEECCCChhhc--ccccC--HHHhCCCCEEEEeehhhhc
Confidence 455555 566 67778766 89999999999964 599999999997763 12111 1112343 23799998
Q ss_pred c-CCccccceeecchH
Q 003466 692 T-GGVIPLAATLATNA 706 (818)
Q Consensus 692 g-gGy~PlsAvl~~~~ 706 (818)
+ .| +-+|.++++++
T Consensus 314 ~mtG-~RlG~i~~~~~ 328 (527)
T PRK09275 314 GATG-WRLGVIALHED 328 (527)
T ss_pred cCcH-hHHhhhhcCch
Confidence 7 56 68888888875
No 346
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.22 E-value=5.7e-05 Score=86.72 Aligned_cols=184 Identities=13% Similarity=0.078 Sum_probs=103.5
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEEeCChh-HHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYFSDNGS-TAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f~~SGs-eA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.....++++.+++.+|......++++++|+ .|+..|+..+ +.. + +....||.-..+ |-++
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~al-r~~--~---------------~~gd~VI~p~~t-h~S~ 164 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSAL-RHK--R---------------PKAKYVIWPRID-QKSC 164 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHc-CCc--C---------------CCCCEEEEECcC-hHHH
Confidence 456678888888888742223688999999 6888887766 311 0 111356666655 7777
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
.-++.+.|.... +++. +..++.+ --|
T Consensus 165 ~kAi~~~G~~pv--------------~Vd~-----------~~d~~~~-----------~iD------------------ 190 (444)
T TIGR03531 165 IKAISTAGFEPR--------------VIET-----------VLDGDEL-----------TTD------------------ 190 (444)
T ss_pred HHHHHHcCCeEE--------------Eeee-----------eecCcCC-----------CcC------------------
Confidence 777777654310 0000 0001101 001
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchh---cc
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTA---DL 677 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~---e~ 677 (818)
.+.|++.|.+ ..++.+.+|+..|- .+..|. ..-+++|.++|++||+.+|+|+++. ++- ..+.. ..
T Consensus 191 ~e~Le~aIt~----~~~kai~~Vv~Tp~-t~~~g~----~ddL~eIa~la~k~gI~lIvDaAyg-~~~--~~~~~~~~~g 258 (444)
T TIGR03531 191 VEDIERAIEE----IGPDNILCVLSTTS-CFAPRS----PDDIEEIAKICANYDIPHIVNNAYG-LQS--NKYMELINKA 258 (444)
T ss_pred HHHHHHHHHh----ccCCCEEEEEEcCC-cCCCcc----hhCHHHHHHHHHHcCCEEEEECcCc-CcC--hhhhhhhhcc
Confidence 2667778763 22356778887774 233333 3349999999999999999999994 311 11110 11
Q ss_pred cCC-CCcEEE--ecccccCCccccceeec-chHHHhhc
Q 003466 678 LGC-VPDIAC--YGKLLTGGVIPLAATLA-TNAVFDSF 711 (818)
Q Consensus 678 ~gv-~PDivt--lgKgLggGy~PlsAvl~-~~~i~~~l 711 (818)
..+ ..|+++ +.|.+... ..-|++++ ++++++.+
T Consensus 259 ~~~Grad~vv~s~hK~l~~p-g~Gg~I~~~d~el~~~i 295 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVP-VGGAIIYSFDENFIQEI 295 (444)
T ss_pred ccccCCCeEEEeCccCCCCC-CCEEEEEECCHHHHHHH
Confidence 112 357765 45766531 01344546 56665544
No 347
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=98.22 E-value=6.3e-06 Score=89.83 Aligned_cols=80 Identities=23% Similarity=0.306 Sum_probs=49.5
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCV 681 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~ 681 (818)
+.+++.+.+ +++.-+.++..|. ..|...+ +++|.++|++||+++|+||+|.++-..+..+-.......
T Consensus 143 ~~l~~~l~~-----~~~~k~v~l~~p~---~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 143 ETFKKALIE-----HPDAKAAVITNPT---YYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred HHHHHHHHh-----CCCceEEEEECCC---CCCEecC----HHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcC
Confidence 566777752 2233345555674 2566665 899999999999999999999642222211111111224
Q ss_pred CcEE--EecccccC
Q 003466 682 PDIA--CYGKLLTG 693 (818)
Q Consensus 682 PDiv--tlgKgLgg 693 (818)
.|++ .+.|.|+|
T Consensus 211 ~div~~S~hK~l~g 224 (294)
T cd00615 211 ADIVVQSTHKTLPA 224 (294)
T ss_pred CcEEEEchhcccch
Confidence 6776 57898865
No 348
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.19 E-value=3.5e-05 Score=84.06 Aligned_cols=179 Identities=16% Similarity=0.198 Sum_probs=114.5
Q ss_pred hhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceE
Q 003466 429 AARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELK 508 (818)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~ 508 (818)
++..|+. +....+|-...|+++++.+=|+ -..+-+.||-.|.-.|+--.. +.|+ .
T Consensus 49 l~~~G~i-YsRi~NPT~~vlE~RiAaLEGG---~aa~a~aSG~AA~~~ai~~la-----~aGD----------------~ 103 (426)
T COG2873 49 LKEPGNI-YTRIMNPTTDVLEERIAALEGG---VAALAVASGQAAITYAILNLA-----GAGD----------------N 103 (426)
T ss_pred CCcCCce-eeeccCchHHHHHHHHHHhhcc---hhhhhhccchHHHHHHHHHhc-----cCCC----------------e
Confidence 4444443 2234577888999999997653 355667799999888887651 2333 6
Q ss_pred EEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhh
Q 003466 509 VLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFY 588 (818)
Q Consensus 509 II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~ 588 (818)
||+-..-|-|+. .-.+.+ ++..|+ +++|-|.+
T Consensus 104 iVss~~LYGGT~-~lf~~t-------------l~~~Gi------------------------------~v~fvd~~---- 135 (426)
T COG2873 104 IVSSSKLYGGTY-NLFSHT-------------LKRLGI------------------------------EVRFVDPD---- 135 (426)
T ss_pred eEeeccccCchH-HHHHHH-------------HHhcCc------------------------------EEEEeCCC----
Confidence 888887776642 222222 000111 01122210
Q ss_pred cccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCccc
Q 003466 589 EERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWR 668 (818)
Q Consensus 589 ~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGR 668 (818)
+ .+.++.+|+ ++..||.+|.+ .+.++.++. ++++.++|++||++||+|..++.
T Consensus 136 ---d--------~~~~~~aI~--------~nTkavf~Eti-gNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at--- 188 (426)
T COG2873 136 ---D--------PENFEAAID--------ENTKAVFAETI-GNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT--- 188 (426)
T ss_pred ---C--------HHHHHHHhC--------cccceEEEEec-cCCCccccC----HHHHHHHHHHcCCcEEEecCCCc---
Confidence 0 155666775 57899999998 777777665 89999999999999999998842
Q ss_pred CCccchhcccCCCCcEEE--ecccccC-CccccceeecchHHHhhc
Q 003466 669 LGVETTADLLGCVPDIAC--YGKLLTG-GVIPLAATLATNAVFDSF 711 (818)
Q Consensus 669 tG~~~a~e~~gv~PDivt--lgKgLgg-Gy~PlsAvl~~~~i~~~l 711 (818)
. +.++-+..-.||++ +.|=+|| | -.||.++...--+|+-
T Consensus 189 -p--yl~rP~~hGADIVvHS~TK~igGhG-t~iGG~iVD~G~FDw~ 230 (426)
T COG2873 189 -P--YLCRPIEHGADIVVHSATKYIGGHG-TAIGGVIVDGGKFDWT 230 (426)
T ss_pred -c--eecchhhcCCCEEEEeecccccCCc-cccceEEEeCCccccc
Confidence 2 33444455678884 7898887 5 5677777655444443
No 349
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.19 E-value=0.00025 Score=80.39 Aligned_cols=199 Identities=13% Similarity=0.080 Sum_probs=108.9
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc----Cc------ccCCc
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT----GF------WRLGV 671 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T----Gf------GRtG~ 671 (818)
+.+++.|+. .+++++..+.++=+ .+.+|-.+.|.+.+++++++|++||+.+++|=+-- -| +-+|.
T Consensus 170 ~~le~~I~~----~g~~~i~~v~~tlt-~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~ 244 (467)
T TIGR02617 170 EGLERGIEE----VGPNNVPYIVATIT-CNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNW 244 (467)
T ss_pred HHHHHHHhh----cCCCCceeeeeeEE-EecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCC
Confidence 667778864 23467888888866 45556666699999999999999999999993210 00 11111
Q ss_pred ---cchhcccCCCCcE--EEecccccCCccccceeec-chH-HHhhccC---------C-----h---H-----------
Q 003466 672 ---ETTADLLGCVPDI--ACYGKLLTGGVIPLAATLA-TNA-VFDSFVG---------D-----S---K----------- 716 (818)
Q Consensus 672 ---~~a~e~~gv~PDi--vtlgKgLggGy~PlsAvl~-~~~-i~~~l~~---------~-----~---~----------- 716 (818)
-.+.+.+. ..|. +|++|+++. |+|.+++ +++ +.+.+.. + + +
T Consensus 245 si~eI~rE~~~-~aDsvt~slsKglgA---pvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e 320 (467)
T TIGR02617 245 SIEQITRETYK-YADMLAMSAKKDAMV---PMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD 320 (467)
T ss_pred CHHHHHHHhhc-cCCEEEEEcCCCCCC---cccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence 01111111 2454 488898873 6555554 443 2221111 0 0 0
Q ss_pred -----HHH------HHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHH-hCCceEe---------
Q 003466 717 -----LWD------LELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLR-EDGVYMR--------- 775 (818)
Q Consensus 717 -----~~~------~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gvlv~--------- 775 (818)
++. +-+-+.|.+.+... ++--|.-+-++-..--++.+....-+..++-.|+ +-||=..
T Consensus 321 ~~~~~yl~~ri~qv~yl~~~L~~~Gvpi-~~~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~r 399 (467)
T TIGR02617 321 GMNLDWLAYRINQVQYLVNGLEEIGVVC-QQAGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGR 399 (467)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCCcE-EecCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceeccc
Confidence 111 12345555554422 2222333333332211122222223555665665 4455321
Q ss_pred -ec--------CCEEEEECCC-CChHHHHHHHHHHHHHHHHHHHH
Q 003466 776 -PL--------GNVIYLMCGP-CSSPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 776 -p~--------g~~ir~~ppl-~~t~edId~~~~~l~~~l~~l~~ 810 (818)
|. -..+|+..|- +.|.+++|.+++++..+.+.-+.
T Consensus 400 d~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~ 444 (467)
T TIGR02617 400 DPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPN 444 (467)
T ss_pred CCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhh
Confidence 11 1567887777 78999999999999888776543
No 350
>PLN02263 serine decarboxylase
Probab=98.13 E-value=0.00085 Score=77.40 Aligned_cols=261 Identities=10% Similarity=0.015 Sum_probs=146.7
Q ss_pred CChhHHHHHHHHHhccCCCC-CCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 441 VYEPALECAELLLQGVGKGW-ASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 441 ~~~~~~eLae~L~~~~~~~~-l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
+++...++-+.++++++-+. -..-+++++|||||..||.+| |.+.. ..+++....-|-+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aA-Re~~~-------------------~~vvy~S~~aH~S 190 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVG-REVFP-------------------DGILYASRESHYS 190 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHH-HhhcC-------------------CcEEEEcCCccHH
Confidence 45666677777888776321 013588999999999999999 54421 1367777777876
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
..-++.+-|... ..++....++ -|
T Consensus 191 v~KAa~llgi~~----------------------------~~Vp~d~~g~-----------mD----------------- 214 (470)
T PLN02263 191 VFKAARMYRMEC----------------------------VKVDTLVSGE-----------ID----------------- 214 (470)
T ss_pred HHHHHHhcCCcc----------------------------eEeccCCCCc-----------Cc-----------------
Confidence 655555544321 0111100000 01
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCC-----cEEEeecccCcccCCccch
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKI-----PVIFDEVFTGFWRLGVETT 674 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gi-----lLI~DEV~TGfGRtG~~~a 674 (818)
.+.|++.|.+ ...+..+|+.--- ...-|.+-| +++|.++|++||+ .|.+|=+..|+-- .+.-
T Consensus 215 -~~aL~~aI~~-----d~~~P~iVvataG-TT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~l--Pf~~ 281 (470)
T PLN02263 215 -CADFKAKLLA-----NKDKPAIINVNIG-TTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGALFGLMM--PFVK 281 (470)
T ss_pred -HHHHHHHHHh-----CCCCcEEEEEEec-CCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEeccchhhHh--hhcc
Confidence 2567777753 2233444443322 445677776 9999999999997 9999988877511 1110
Q ss_pred -hccc-C-CCCcEEEe--cccccCCccccceeecchHHHhhccCCh-------------H-------HH-----------
Q 003466 675 -ADLL-G-CVPDIACY--GKLLTGGVIPLAATLATNAVFDSFVGDS-------------K-------LW----------- 718 (818)
Q Consensus 675 -~e~~-g-v~PDivtl--gKgLggGy~PlsAvl~~~~i~~~l~~~~-------------~-------~~----------- 718 (818)
...+ + ...|=+++ =|-++.- +|.|+++.+++..+.+.... + .|
T Consensus 282 ~~~~~df~~~vDSIsvD~HK~l~~P-~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~ 360 (470)
T PLN02263 282 RAPKVTFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGF 360 (470)
T ss_pred cccccCCCcCccEEEECCccccCCC-cCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHH
Confidence 0011 1 12454443 3666666 58888888876554332211 1 11
Q ss_pred ----------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeecCCEEEEECCCC
Q 003466 719 ----------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPLGNVIYLMCGPC 788 (818)
Q Consensus 719 ----------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~g~~ir~~ppl~ 788 (818)
.+.+.+.+++.+...-..-....+. |..+ ...+..+|..+...++.+++.....
T Consensus 361 ~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~--f~~p--------------~~~~~~~gW~L~~~~~~~Hivvmph 424 (470)
T PLN02263 361 QKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVV--FERP--------------KDEEFVRRWQLACQGNIAHVVVMPS 424 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEE--EecC--------------chHHhhcceEEccCCCcEEEEEcCC
Confidence 1122334444432111112222222 3222 0112456877777666677777776
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q 003466 789 SSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 789 ~t~edId~~~~~l~~~l~~ 807 (818)
++.+.||++++-|.+..+.
T Consensus 425 v~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 425 VTIEKLDYFLKELVEKRST 443 (470)
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 8899999999999888764
No 351
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=98.11 E-value=1.3e-05 Score=80.03 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=61.5
Q ss_pred CEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCCC---C---HH
Q 003466 222 ILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGLV---N---EV 295 (818)
Q Consensus 222 d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~~---~---~~ 295 (818)
|++||.+.+++... ........+ -+|+|+.....++..+...++.++..+.+..++|+|++... . .+
T Consensus 64 d~viiD~p~~~~~~------~~~~l~~ad-~viiv~~~~~~s~~~~~~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~ 136 (179)
T cd02036 64 DYILIDSPAGIERG------FITAIAPAD-EALLVTTPEISSLRDADRVKGLLEALGIKVVGVIVNRVRPDMVEGGDMVE 136 (179)
T ss_pred CEEEEECCCCCcHH------HHHHHHhCC-cEEEEeCCCcchHHHHHHHHHHHHHcCCceEEEEEeCCcccccchhhHHH
Confidence 89999998764332 222222222 48889999999999999999999887888999999998321 1 24
Q ss_pred HHHHhhcCCCCEEe-cCCCCC
Q 003466 296 PLMSYLRNRVPVLV-LPPLPQ 315 (818)
Q Consensus 296 ~l~~~~~~~~pvlg-iP~~~~ 315 (818)
.+++.+ +.|+++ ||+.+.
T Consensus 137 ~~~~~~--~~~v~~~Ip~~~~ 155 (179)
T cd02036 137 DIEEIL--GVPLLGVIPEDPA 155 (179)
T ss_pred HHHHHh--CCCEEEEecCCHH
Confidence 456666 899999 897544
No 352
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=98.07 E-value=3.3e-05 Score=85.38 Aligned_cols=92 Identities=16% Similarity=0.210 Sum_probs=65.2
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChH---HHHHHHHHHHHhCC--CcEEEEEEccCCC-CC
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGI---SGTISAYESLKLRG--YDVVAVVFEDHGL-VN 293 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i---~~~~~~~~~l~~~~--~~v~gvi~N~~~~-~~ 293 (818)
.+|++||-..|++.++ .....+++.+.--||+|+....-++ +.+..+++.++..| .++.|+|+|+... ..
T Consensus 147 ~~DyVliD~~gdv~~g----gf~l~i~~~~ad~VIVVt~pe~~si~~A~~v~kai~~~~~lg~~~~i~GlViNr~d~~~~ 222 (329)
T cd02033 147 DFDYVLLDFLGDVVCG----GFGLPIARDMAQKVIVVGSNDLQSLYVANNVCNAVEYFRKLGGNVGVAGMVINKDDGTGE 222 (329)
T ss_pred cCCEEEEecCCcceec----cccchhhhcCCceEEEeCCchHHHHHHHHHHHHHHHHHHHhCCCCCceEEEEeCcCCcch
Confidence 3899999998865532 1234444444446788888888777 45677888887664 6789999999843 33
Q ss_pred HHHHHHhhcCCCCEEe-cCCCCCCC
Q 003466 294 EVPLMSYLRNRVPVLV-LPPLPQDS 317 (818)
Q Consensus 294 ~~~l~~~~~~~~pvlg-iP~~~~~~ 317 (818)
.+.+.+.+ ++|++| ||+.+...
T Consensus 223 ie~~ae~l--gi~vLg~IP~D~~V~ 245 (329)
T cd02033 223 AQAFAAHA--GIPILAAIPADEELR 245 (329)
T ss_pred HHHHHHHh--CCCEEEECCCCHHHH
Confidence 45555556 999999 99987654
No 353
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.06 E-value=5e-05 Score=85.37 Aligned_cols=49 Identities=22% Similarity=0.221 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEF 808 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l 808 (818)
...+...|.++||.+.+. ++.+|+......|++||++++++|+++++++
T Consensus 308 ~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 308 AATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred HHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 456788888999998753 3679999999999999999999999987653
No 354
>PRK06434 cystathionine gamma-lyase; Validated
Probab=98.06 E-value=0.00013 Score=82.67 Aligned_cols=130 Identities=15% Similarity=0.230 Sum_probs=77.8
Q ss_pred CCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccC-
Q 003466 617 SGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTG- 693 (818)
Q Consensus 617 ~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLgg- 693 (818)
++++.+|++|-+ ....+.+.+ +++|.++|+++| +++|.++ |-+..+ ...+.-.|++++| |-++|
T Consensus 146 ~~~tklv~~e~~-snpt~~v~D----i~~I~~la~~~~--lvVD~t~-~s~~~~-----~pl~~gaDivv~S~tK~i~G~ 212 (384)
T PRK06434 146 PSNYDLIYAESI-TNPTLKVPD----IKNVSSFCHEND--VIVDATF-ASPYNQ-----NPLDLGADVVIHSATKYISGH 212 (384)
T ss_pred CCCeeEEEEEcC-CCCCceeec----HHHHHHHHHHcC--eEEECCC-CCcccC-----CchhcCCCEEEeecccccCCC
Confidence 346788999986 555555544 999999999998 4679997 221222 2334557988765 77765
Q ss_pred Cccccceeec-chHHHhhccC------Ch--H---------------HH------HHHHHHHHHcCCCeeEEE-------
Q 003466 694 GVIPLAATLA-TNAVFDSFVG------DS--K---------------LW------DLELIQQISSHRTVQRVV------- 736 (818)
Q Consensus 694 Gy~PlsAvl~-~~~i~~~l~~------~~--~---------------~~------~~~l~~~l~~~~~v~~vr------- 736 (818)
|=.=.|++++ ++++++.+.. .. . .+ ...+.+.|+.||.|..|.
T Consensus 213 ~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~ 292 (384)
T PRK06434 213 SDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIG 292 (384)
T ss_pred CCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHH
Confidence 2112345555 4455443221 00 0 11 123456678888876653
Q ss_pred -----eeeeEEEEEEecCcccCCCchHHHHHHHHHH
Q 003466 737 -----ALGTLCAIELQAAGCNAGYGSLYAASLLKKL 767 (818)
Q Consensus 737 -----g~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l 767 (818)
|.|.|++|++... +.+.+|.+.|
T Consensus 293 ~~~~~g~g~~~sf~l~~~--------~~~~~f~~~l 320 (384)
T PRK06434 293 KKVLRGFGGMLSFELRSM--------EDVHKFIRNL 320 (384)
T ss_pred HHhcCCCCceEEEEECCH--------HHHHHHHHhC
Confidence 6788999999632 3455555554
No 355
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.03 E-value=0.00025 Score=80.23 Aligned_cols=49 Identities=20% Similarity=0.232 Sum_probs=40.3
Q ss_pred HHHHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHHHHH
Q 003466 762 SLLKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 762 ~~~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~ 810 (818)
.+...+.++|++++.+ ++.+|+.+....|++||++++++|+++++++++
T Consensus 323 ~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 323 AAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred HHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 4566777888888642 368999999999999999999999998877664
No 356
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=98.00 E-value=0.00067 Score=79.57 Aligned_cols=80 Identities=19% Similarity=0.279 Sum_probs=55.8
Q ss_pred cEEEEE-EccccccCCCcccCCHHHHHHHHHHHHhc--CCcEEEeecccCcccCCccchhcccCCCCc----EEEecccc
Q 003466 619 CIGALI-IEPVVHAAGGMHMVDPLFQRILVKECQNR--KIPVIFDEVFTGFWRLGVETTADLLGCVPD----IACYGKLL 691 (818)
Q Consensus 619 ~iAAVI-vEPV~~g~gG~~~~p~~fl~~LreLc~~~--gilLI~DEV~TGfGRtG~~~a~e~~gv~PD----ivtlgKgL 691 (818)
++.+|+ +.| ++-.|.+. +.+-+++|.++|++| |+++|.|||+..|- ..+-. .....|| +..|||.+
T Consensus 240 ~~kai~l~nP--~NPTG~vl-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~--~~~~s--l~~~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 240 SIKALFVVNP--SNPPSVAM-SDESIEKIVDIVANDRPDLMILTDDVYGTFV--DDFRS--LFAELPYNTIGVYSFSKYF 312 (521)
T ss_pred CCcEEEEeCC--CCCCCCCC-CHHHHHHHHHHHHhcCCCeEEEECCCchhhc--ccccc--hhhhCCCCEEEEEcchhhc
Confidence 455544 677 57777766 789999999999987 99999999997663 12111 1122344 23699988
Q ss_pred c-CCccccceeecchH
Q 003466 692 T-GGVIPLAATLATNA 706 (818)
Q Consensus 692 g-gGy~PlsAvl~~~~ 706 (818)
| .| +-+|.++++++
T Consensus 313 g~~G-~RlG~i~~~~~ 327 (521)
T TIGR03801 313 GATG-WRLGTIALHKD 327 (521)
T ss_pred cCch-hhhhhhhcCch
Confidence 6 56 68888888754
No 357
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=97.98 E-value=0.00016 Score=74.89 Aligned_cols=72 Identities=19% Similarity=0.138 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhccccccccccccCCC--CEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHH
Q 003466 195 SKVIETLGKCLRDGLESESESERGKME--ILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYE 272 (818)
Q Consensus 195 ~~i~~~~~~~~~~~~~~~~~~~~~~~~--d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~ 272 (818)
+.+.+.++.+.++ | |+|||....+... .....++...+ -||+|+..+.-++..+..+++
T Consensus 134 ~~l~~~l~~l~~~-------------y~~D~IiiD~pp~~~~-----~~~~~l~~~aD-~viiV~~~~~~~~~~~~~~~~ 194 (207)
T TIGR03018 134 QRMRSLLHELARR-------------YPDRIIIIDTPPLLVF-----SEARALARLVG-QIVLVVEEGRTTQEAVKEALS 194 (207)
T ss_pred HHHHHHHHHHHhh-------------CCCCEEEEECCCCcch-----hHHHHHHHhCC-EEEEEEECCCCCHHHHHHHHH
Confidence 4566666666655 6 9999999543322 23344555544 577888888888889888999
Q ss_pred HHHhCCCcEEEEEEc
Q 003466 273 SLKLRGYDVVAVVFE 287 (818)
Q Consensus 273 ~l~~~~~~v~gvi~N 287 (818)
.++ +..+.|+|+|
T Consensus 195 ~l~--~~~~~G~v~N 207 (207)
T TIGR03018 195 ALE--SCKVLGVVLN 207 (207)
T ss_pred Hhc--CCCeEEEEeC
Confidence 887 7899999998
No 358
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.98 E-value=0.0005 Score=79.17 Aligned_cols=281 Identities=14% Similarity=0.084 Sum_probs=172.0
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEE-eCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYF-SDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f-~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.+...+|++.|++.+| ++.+.| -|||+..--+.|+.. |.|...+|+ +.+.|....-|-||.-
T Consensus 581 ~~lf~~Le~~Lc~iTG---~D~~s~QPNsGA~GEYaGL~~I-RaY~~~kge-------------~hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEITG---FDSFSLQPNSGAQGEYAGLRVI-RAYLESKGE-------------GHRNVCLIPVSAHGTN 643 (1001)
T ss_pred HHHHHHHHHHhheeec---ccceeecCCCCcccchhhHHHH-HHHHHhccC-------------CcceeEEEeecccCCC
Confidence 3556789999999998 566655 478888888888887 888777664 3456788889999987
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
-.+..+.|.+.. ++ .+. .+.+++
T Consensus 644 PASA~Magmkvv------------------------------pV-~~~----------~~G~id---------------- 666 (1001)
T KOG2040|consen 644 PASAAMAGMKVV------------------------------PV-GCD----------ANGNID---------------- 666 (1001)
T ss_pred hhhHHhcCCEEE------------------------------Ee-ecc----------CCCCcc----------------
Confidence 666666553310 00 000 012211
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEe----ecccCcccCCccch-h
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFD----EVFTGFWRLGVETT-A 675 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~D----EV~TGfGRtG~~~a-~ 675 (818)
..+|...-+ ++.++.||++|-- -+.-|+..+. .+.+.++.++||--+++| .+|.|+.|-|-.++ .
T Consensus 667 ~~dLk~kae-----kh~~~Laa~MvTY--PST~GvfE~~---i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV 736 (1001)
T KOG2040|consen 667 MVDLKAKAE-----KHKDNLAALMVTY--PSTHGVFEEG---IDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADV 736 (1001)
T ss_pred HHHHHHHHH-----HhhhhhheeEEec--cccccccccc---HHHHHHHHHhcCCEEEecCCCccceecccCCccccccc
Confidence 134444444 5678888888774 3455665543 677788889999999999 55889999988765 2
Q ss_pred cccCCCCcEEEecccccCC---ccccceeecchHHHhhccCChH-------------------------------HH---
Q 003466 676 DLLGCVPDIACYGKLLTGG---VIPLAATLATNAVFDSFVGDSK-------------------------------LW--- 718 (818)
Q Consensus 676 e~~gv~PDivtlgKgLggG---y~PlsAvl~~~~i~~~l~~~~~-------------------------------~~--- 718 (818)
.|+++.- ||.=.=||| +-||+ .++.++.++-+... ++
T Consensus 737 ~HLNLHK---TFcIPHGGGGPg~gPIg---VK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmM 810 (1001)
T KOG2040|consen 737 CHLNLHK---TFCIPHGGGGPGMGPIG---VKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMM 810 (1001)
T ss_pred eeecccc---eeeecCCCCCCCCCccc---hhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHh
Confidence 3444431 222222322 22332 23333332211100 00
Q ss_pred ---------------HHHHHHHHHcCCCeeEEEeeeeEEEEEEecCccc-CCCchHHHHHHHHHHHhCCceEe----ecC
Q 003466 719 ---------------DLELIQQISSHRTVQRVVALGTLCAIELQAAGCN-AGYGSLYAASLLKKLREDGVYMR----PLG 778 (818)
Q Consensus 719 ---------------~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~-~~~~~~~a~~~~~~l~e~Gvlv~----p~g 778 (818)
.+-..++|+.|-.+......| ..+-||.-+-.. ..-....+..++++|.+-|+... |..
T Consensus 811 G~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~-~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~ 889 (1001)
T KOG2040|consen 811 GSGGLKDASKIAILNANYMAKRLESHYKILFRGENG-LVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVA 889 (1001)
T ss_pred cccccchhhHHHhhhhHHHHHHHhhccceeEecCCc-ceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccC
Confidence 112334565554333222233 566666443110 00112347789999999999875 456
Q ss_pred CEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhHH
Q 003466 779 NVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVEE 813 (818)
Q Consensus 779 ~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~~ 813 (818)
+++.+-|.---+.+|+|++++++-..-+|+.++++
T Consensus 890 gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ie~ 924 (1001)
T KOG2040|consen 890 GTLMIEPTESEDKAELDRFCDALISIREEIAQIEE 924 (1001)
T ss_pred CceEeccCccccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 89999999888899999999999888877776654
No 359
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=97.96 E-value=0.0025 Score=75.07 Aligned_cols=81 Identities=15% Similarity=-0.041 Sum_probs=53.4
Q ss_pred cEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC-CCcEEEec--ccccCCc
Q 003466 619 CIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC-VPDIACYG--KLLTGGV 695 (818)
Q Consensus 619 ~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtlg--KgLggGy 695 (818)
++.+|+.-.. ....|.+.| +++|.++|++||+.|.+|=++.|....-.-+....-|+ ..|.++++ |.+.+-
T Consensus 265 ~~~~vvataG-tt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P- 338 (522)
T TIGR03799 265 KPLAIVGVAG-TTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVP- 338 (522)
T ss_pred CcEEEEEEec-CcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcC-
Confidence 4555554332 345677777 99999999999999999999865422111111112355 67988776 666665
Q ss_pred cccceeecch
Q 003466 696 IPLAATLATN 705 (818)
Q Consensus 696 ~PlsAvl~~~ 705 (818)
++.|+++.++
T Consensus 339 ~g~G~llvr~ 348 (522)
T TIGR03799 339 MGAGMVLFKD 348 (522)
T ss_pred cccEEEEEeC
Confidence 4677887764
No 360
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=97.95 E-value=4.5e-05 Score=77.09 Aligned_cols=66 Identities=21% Similarity=0.146 Sum_probs=46.4
Q ss_pred CCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCC--CcEEEEEEccCCCCC
Q 003466 221 EILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRG--YDVVAVVFEDHGLVN 293 (818)
Q Consensus 221 ~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~--~~v~gvi~N~~~~~~ 293 (818)
+|++||++.+|+..+ ...+-..---+|+|+....-.+..+...++.++..+ .++.|+|+|++...+
T Consensus 95 yD~iiiD~~~~~~~~-------~~~~l~~ad~viv~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~vv~N~v~~~~ 162 (195)
T PF01656_consen 95 YDYIIIDTPPGLSDP-------VRNALAAADYVIVPIEPDPSSIEGAERLIELLKRLGKKLKIIGVVINRVDPGN 162 (195)
T ss_dssp SSEEEEEECSSSSHH-------HHHHHHTSSEEEEEEESSHHHHHHHHHHHHHHHHHTHTEEEEEEEEEEETSCC
T ss_pred ccceeecccccccHH-------HHHHHHhCceeeeecCCcHHHHHHHHHHHHHHHHhccccceEEEEEeeeCCCc
Confidence 999999998866554 111222222266777777667888888888888766 568999999995553
No 361
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.92 E-value=0.00071 Score=75.38 Aligned_cols=276 Identities=15% Similarity=0.079 Sum_probs=165.7
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEE-eCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYF-SDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f-~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.+...+|+++|++.+| ++.|.+ -++|+..=-+.|-+. |.|+..+|+ . .++++....|-||.-
T Consensus 108 l~li~~Lq~~L~~ITG---~DavsLQP~AGAqGE~aGll~I-r~YHe~rG~------------~-~R~~~LIP~SAHGTN 170 (496)
T COG1003 108 LELIYELQEWLKEITG---MDAVSLQPNAGAQGEYAGLLAI-RAYHESRGE------------G-HRNICLIPDSAHGTN 170 (496)
T ss_pred HHHHHHHHHHHHHhcC---CceeeccCCCCcchhhHHHHHH-HHHHHHcCC------------C-cCcEEEeeccccCCC
Confidence 3556789999999998 566655 477998888888887 778777664 2 456788889999977
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
-.+.++.|-+. |.++..- -.+. +
T Consensus 171 PASAam~G~~V------------------------------V~V~~~~-----------~G~V-----------D----- 193 (496)
T COG1003 171 PASAAMAGFKV------------------------------VVVKCDE-----------NGNV-----------D----- 193 (496)
T ss_pred hhhHhhcCceE------------------------------EEEecCC-----------CCCc-----------c-----
Confidence 66666654321 1111100 0000 0
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEE-ccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEee----cccCcccCCccch-
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALII-EPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDE----VFTGFWRLGVETT- 674 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIv-EPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DE----V~TGfGRtG~~~a- 674 (818)
.++|+..+. +++||+++ -| +.-|+.- +-.+++.++.+++|..|++|= ++-|.-|-|.+++
T Consensus 194 lddLk~k~~--------~~~AalMiTnP---sT~GvFE---~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~D 259 (496)
T COG1003 194 LDDLRAKAE--------DNLAALMITNP---STLGVFE---EDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFD 259 (496)
T ss_pred HHHHHHHhc--------cceeEEEeccC---cccccch---hhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccc
Confidence 255665553 56666555 45 3345533 347788888899999999994 4668888887654
Q ss_pred hcccCCCCcEEEecccccCCccccc-eeecchHHHhhccC----ChH-------------------------------HH
Q 003466 675 ADLLGCVPDIACYGKLLTGGVIPLA-ATLATNAVFDSFVG----DSK-------------------------------LW 718 (818)
Q Consensus 675 ~e~~gv~PDivtlgKgLggGy~Pls-Avl~~~~i~~~l~~----~~~-------------------------------~~ 718 (818)
..|+++. =||+-.=||| =|-+ -|..++.+..++-. ... ++
T Consensus 260 V~HlNLH---KTF~iPHGGG-GPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI 335 (496)
T COG1003 260 VVHLNLH---KTFCIPHGGG-GPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYI 335 (496)
T ss_pred eEEeecc---cccccCCCCC-CCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHH
Confidence 3444443 1444444544 2333 24445555544322 000 11
Q ss_pred H----HH--------------HHHHHHc-CCCeeEEEeeeeEEEEEEecCcccC-CCchHHHHHHHHHHHhCCceEe---
Q 003466 719 D----LE--------------LIQQISS-HRTVQRVVALGTLCAIELQAAGCNA-GYGSLYAASLLKKLREDGVYMR--- 775 (818)
Q Consensus 719 ~----~~--------------l~~~l~~-~~~v~~vrg~Gl~~~iel~~~~~~~-~~~~~~a~~~~~~l~e~Gvlv~--- 775 (818)
. +. +.++|+. ++.. ..+.. ...-|++-+.... .-....+..++++|++.|++..
T Consensus 336 ~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~--y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~ 412 (496)
T COG1003 336 RMMGADGLKQASEVAVLNANYIARRLKGYYPVP--YTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMY 412 (496)
T ss_pred HHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccc--cCCCC-cceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCccc
Confidence 0 11 1223332 2221 12222 3334443321100 0011347789999999999885
Q ss_pred -e--cCCEEEEECCCCChHHHHHHHHHHHHHHHHHHHHhH
Q 003466 776 -P--LGNVIYLMCGPCSSPEVCSQLLLKLYQRLEEFDKVE 812 (818)
Q Consensus 776 -p--~g~~ir~~ppl~~t~edId~~~~~l~~~l~~l~~~~ 812 (818)
| ....+.+-|+-+-|++++|++++++.++.++.+++.
T Consensus 413 FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 413 FPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred CccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 3 457899999999999999999999999998887653
No 362
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=97.91 E-value=0.00023 Score=76.73 Aligned_cols=75 Identities=21% Similarity=0.156 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHH
Q 003466 195 SKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESL 274 (818)
Q Consensus 195 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l 274 (818)
+.+.+.+.++.++ ||+|||... |........-++...+ -||+|+..+.-++..+..+++.+
T Consensus 200 ~~~~~~l~~l~~~-------------yD~ViiD~p-----p~~~~~d~~~~~~~~d-~vilV~~~~~t~~~~~~~~~~~l 260 (274)
T TIGR03029 200 PAFTDLLNKVMGD-------------YDVVIVDTP-----SAEHSSDAQIVATRAR-GTLIVSRVNETRLHELTSLKEHL 260 (274)
T ss_pred HHHHHHHHHHHhc-------------CCEEEEeCC-----CcccccHHHHHHHhCC-eEEEEEECCCCCHHHHHHHHHHH
Confidence 3455566666544 999999983 3221122333444443 57789998888999999999999
Q ss_pred HhCCCcEEEEEEcc
Q 003466 275 KLRGYDVVAVVFED 288 (818)
Q Consensus 275 ~~~~~~v~gvi~N~ 288 (818)
+..|.++.|+|+|+
T Consensus 261 ~~~~~~~~G~VlN~ 274 (274)
T TIGR03029 261 SGVGVRVVGAVLNQ 274 (274)
T ss_pred HhCCCCEEEEEeCC
Confidence 99999999999996
No 363
>PRK11670 antiporter inner membrane protein; Provisional
Probab=97.89 E-value=0.00057 Score=77.04 Aligned_cols=89 Identities=11% Similarity=0.042 Sum_probs=60.9
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCC-EEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCC--C----
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLP-GILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGL--V---- 292 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~p-vilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~--~---- 292 (818)
.||++||-..-|+ +...+.++..+.+. +|+|+....-++..+..+++.++..++++.|+|+|++.. .
T Consensus 215 ~yDyvIID~PPg~------gd~~l~~~~l~aad~viiV~tp~~~s~~da~~~i~~~~~~~~~ilGiV~Nm~~~~~~~~~~ 288 (369)
T PRK11670 215 DLDYLVLDMPPGT------GDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSMHICSNCGH 288 (369)
T ss_pred cCCEEEEeCCCCC------chHHHHHhhhccCCeEEEEecCchhHHHHHHHHHHHHhccCCCeEEEEEcCCccccCCccc
Confidence 3999999985442 22223333333333 677888777777888888888888889999999998621 1
Q ss_pred --------CHHHHHHhhcCCCCEEe-cCCCCCC
Q 003466 293 --------NEVPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 293 --------~~~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
..+.+.+.+ ++|+++ ||.....
T Consensus 289 ~~~if~~~~~~~lae~~--~~~ll~~IP~~~~I 319 (369)
T PRK11670 289 HEPIFGTGGAEKLAEKY--HTQLLGQMPLHISL 319 (369)
T ss_pred hhhhcccchHHHHHHHc--CCcEEEEeCCChHH
Confidence 134445555 899999 9987663
No 364
>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=97.89 E-value=0.00045 Score=74.40 Aligned_cols=87 Identities=17% Similarity=0.145 Sum_probs=66.9
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccC----CC---C
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDH----GL---V 292 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~----~~---~ 292 (818)
.+|++||+. |-......+.++..+---+|+|+..+.-....+.-+++.++.-+.+|.|||.|.. .. .
T Consensus 166 ~~D~vIID~------PP~~g~~d~~i~~~~~~g~viVt~p~~~~~~~v~ka~~~~~~~~~~vlGvv~Nm~~~~~~~~~~g 239 (265)
T COG0489 166 EYDYVIIDT------PPGTGDADATVLQRIPDGVVIVTTPGKTALEDVKKAIDMLEKAGIPVLGVVENMSYFICPRCGEG 239 (265)
T ss_pred CCCEEEEeC------CCCchHHHHHHHhccCCeEEEEeCCccchHHHHHHHHHHHHhcCCceEEEEecCccCcccccCCC
Confidence 399999998 3334556777777776689999999999999999999999999999999999965 11 1
Q ss_pred CHHHHHHhhcCCCCEEe-cCCCCC
Q 003466 293 NEVPLMSYLRNRVPVLV-LPPLPQ 315 (818)
Q Consensus 293 ~~~~l~~~~~~~~pvlg-iP~~~~ 315 (818)
..+.+-+.. + |++| +|..+.
T Consensus 240 ~~~~~~~~~--~-~~~g~~p~~~~ 260 (265)
T COG0489 240 GGEKYAERY--G-PYLGSIPLDPS 260 (265)
T ss_pred chhhHHHHh--c-cccccCCCChh
Confidence 344444444 5 8888 886554
No 365
>COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion]
Probab=97.87 E-value=0.0003 Score=74.39 Aligned_cols=103 Identities=22% Similarity=0.293 Sum_probs=81.3
Q ss_pred hhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHH
Q 003466 194 DSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYES 273 (818)
Q Consensus 194 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~ 273 (818)
.-+++..+++...+. .|++||.++=|+..|...-...+|+ +|+|+-.---+++.....++.
T Consensus 149 s~~lV~~~kk~a~E~------------~~~~IIDsaaG~gCpVi~sl~~aD~-------ai~VTEPTp~glhD~kr~~el 209 (284)
T COG1149 149 SGKLVTALKKHAKEL------------ADLLIIDSAAGTGCPVIASLKGADL-------AILVTEPTPFGLHDLKRALEL 209 (284)
T ss_pred cchHHHHHHHhhhhh------------cceeEEecCCCCCChHHHhhccCCE-------EEEEecCCccchhHHHHHHHH
Confidence 446667777766551 6999999999999996554555554 578888889999999999999
Q ss_pred HHhCCCcEEEEEEccCCCCCHHHHHHhhcC-CCCEEe-cCCCCCCC
Q 003466 274 LKLRGYDVVAVVFEDHGLVNEVPLMSYLRN-RVPVLV-LPPLPQDS 317 (818)
Q Consensus 274 l~~~~~~v~gvi~N~~~~~~~~~l~~~~~~-~~pvlg-iP~~~~~~ 317 (818)
.+.-|++ .++|+||....+. .|+++.++ ++|+++ ||+..+..
T Consensus 210 ~~~f~ip-~~iViNr~~~g~s-~ie~~~~e~gi~il~~IPyd~~i~ 253 (284)
T COG1149 210 VEHFGIP-TGIVINRYNLGDS-EIEEYCEEEGIPILGEIPYDKDIP 253 (284)
T ss_pred HHHhCCc-eEEEEecCCCCch-HHHHHHHHcCCCeeEECCcchhHH
Confidence 9988888 7999999944444 78888776 999999 99987643
No 366
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.86 E-value=0.00094 Score=74.89 Aligned_cols=55 Identities=13% Similarity=-0.037 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhhhcccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHH
Q 003466 419 IELARDMGYTAARFGHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMA 481 (818)
Q Consensus 419 p~V~eAi~~q~~~~~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA 481 (818)
.+..+++.+.++..... . -+...++++++++.+|. ..++-++||+.|.+.||+.+
T Consensus 15 ~~e~~~v~~vl~sg~i~----~-G~~v~~FE~~~ae~~G~---k~ava~~sgT~AL~laL~al 69 (374)
T COG0399 15 EEELAAVQEVLKSGWLT----G-GPFVRRFEQAFAEYLGV---KYAVAVSSGTAALHLALLAL 69 (374)
T ss_pred hHHHHHHHHHHHcCCee----c-ChHHHHHHHHHHHHhCC---CeEEEecChHHHHHHHHHhc
Confidence 34555666666543221 1 35678999999999984 68999999999999999966
No 367
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=97.85 E-value=0.00079 Score=75.59 Aligned_cols=207 Identities=17% Similarity=0.140 Sum_probs=118.9
Q ss_pred ceeecccccccccCCCCCCHHHHHHHHHhhhhc-ccccCCCCC--ChhHHHHH-HHHHhccCCCCCCcEEEeCChhHHHH
Q 003466 400 QQFDACASWWTQGPDATLQIELARDMGYTAARF-GHVMFPENV--YEPALECA-ELLLQGVGKGWASRAYFSDNGSTAIE 475 (818)
Q Consensus 400 ~ylD~~sg~~~~~lGh~~hp~V~eAi~~q~~~~-~~~~~~~~~--~~~~~eLa-e~L~~~~~~~~l~~v~f~~SGseA~e 475 (818)
-|||..+ .|=. +|+|.+|+.+.+.++ +......+. .+...|.+ +.++.+.+... ..+.|+++++|||-
T Consensus 45 vyld~~a------t~p~-~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~-~dIiFts~ATEs~N 116 (428)
T KOG1549|consen 45 VYLDNQA------TGPM-DPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADP-SDIVFTSGATESNN 116 (428)
T ss_pred EEEecCc------CCCC-CHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCC-CcEEEeCCchHHHH
Confidence 5778654 5656 999999999877664 221111122 23334444 44445555442 45999999999999
Q ss_pred HHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccc
Q 003466 476 IALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFM 555 (818)
Q Consensus 476 ~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~ 555 (818)
.+++-.-+.+.. + .+..||.+ ..=|.+...++...-. .| +
T Consensus 117 lvl~~v~~~~~~--~--------------~~k~iitl-~~eH~~v~~s~~~l~~--------------~g--~------- 156 (428)
T KOG1549|consen 117 LVLKGVARFFGD--K--------------TKKHIITL-QTEHPCVLDSCRALQE--------------EG--L------- 156 (428)
T ss_pred HHHHHhhccccc--c--------------ccceEEEe-cccCcchhHHHHHHHh--------------cC--e-------
Confidence 999966232211 1 11244444 4455554443322211 11 0
Q ss_pred cCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCc
Q 003466 556 YNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGM 635 (818)
Q Consensus 556 ~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~ 635 (818)
.+..++++... +-| .+.+++.|+ .++.+|.+.-| .++-|+
T Consensus 157 --~Vt~lpv~~~~-----------~~d------------------~~~~~~~i~--------~~T~lv~I~~V-nn~~gv 196 (428)
T KOG1549|consen 157 --EVTYLPVEDSG-----------LVD------------------ISKLREAIR--------SKTRLVSIMHV-NNEIGV 196 (428)
T ss_pred --EEEEeccCccc-----------ccc------------------HHHHHHhcC--------CCceEEEEEec-ccCccc
Confidence 01112222110 111 245566664 47889999998 899999
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecch
Q 003466 636 HMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATN 705 (818)
Q Consensus 636 ~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~ 705 (818)
..| +++|.++|++.|+.++.|=+| +.|.. -.+--.+.+|.++++ |.+|- =++|+.-+++
T Consensus 197 ~~P----v~EI~~icr~~~v~v~~DaAQ-avG~i----~vDV~eln~D~~s~s~HK~ygp--~~iGaLYvr~ 257 (428)
T KOG1549|consen 197 LQP----VKEIVKICREEGVQVHVDAAQ-AVGKI----PVDVQELNADFLSISAHKIYGP--PGIGALYVRR 257 (428)
T ss_pred ccc----HHHHHHHhCcCCcEEEeehhh-hcCCc----cccHHHcCchheeeecccccCC--CcceEEEEcc
Confidence 998 999999999999999999998 44321 112223456666443 54443 1255555554
No 368
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein.
Probab=97.84 E-value=0.00036 Score=76.40 Aligned_cols=92 Identities=16% Similarity=0.196 Sum_probs=56.5
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCCh---HHHHHHHHHHHHhCC--CcEEEEEEccCCC-CC
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGG---ISGTISAYESLKLRG--YDVVAVVFEDHGL-VN 293 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~---i~~~~~~~~~l~~~~--~~v~gvi~N~~~~-~~ 293 (818)
.||++||-..|++.++... ..++...---||+|+....-+ .+.+..+++.++..+ +++.|+|+|+... ..
T Consensus 122 ~yD~IliD~~~~~~~~g~~----~~~a~~~Ad~viVvt~~e~~sl~~a~~l~k~v~~~~~~~~~v~i~GVV~N~~~~~~~ 197 (296)
T TIGR02016 122 DFDFVLMDFLGDVVCGGFA----TPLARSLAEEVIVIGSNDRQSLYVANNICNAVEYFRKLGGRVGLLGLVVNRDDGSGE 197 (296)
T ss_pred cCCEEEEecCCCccccccc----cchhhhhCCeEEEEecchHHHHHHHHHHHHHHHHHHHcCCCCcceEEEEeCCCCccH
Confidence 3999999986654332110 111111112456777765434 456666777776654 7899999999843 23
Q ss_pred HHHHHHhhcCCCCEEe-cCCCCCCC
Q 003466 294 EVPLMSYLRNRVPVLV-LPPLPQDS 317 (818)
Q Consensus 294 ~~~l~~~~~~~~pvlg-iP~~~~~~ 317 (818)
.+.+.+.. ++|+++ ||+.+...
T Consensus 198 ~~~~~~~~--~i~vLg~IP~d~~i~ 220 (296)
T TIGR02016 198 AQAFAREV--GIPVLAAIPADEELR 220 (296)
T ss_pred HHHHHHHc--CCCeEEECCCCHHHH
Confidence 33344444 999999 99987654
No 369
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=97.79 E-value=0.00074 Score=70.13 Aligned_cols=94 Identities=23% Similarity=0.185 Sum_probs=61.1
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCCCCHHHHHH
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGLVNEVPLMS 299 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~~~~~~l~~ 299 (818)
.+|+|||..=-|+--=...-.-.+|+ +|.|++...-++--+--..++..+-|++=.++|+|++.+. ...++.
T Consensus 133 ~~e~VivDtEAGiEHfgRg~~~~vD~-------vivVvDpS~~sl~taeri~~L~~elg~k~i~~V~NKv~e~-e~~~~~ 204 (255)
T COG3640 133 RYEVVIVDTEAGIEHFGRGTIEGVDL-------VIVVVDPSYKSLRTAERIKELAEELGIKRIFVVLNKVDEE-EELLRE 204 (255)
T ss_pred cCcEEEEecccchhhhccccccCCCE-------EEEEeCCcHHHHHHHHHHHHHHHHhCCceEEEEEeeccch-hHHHHh
Confidence 48999998854432211111223332 5788887766666665566666677877889999999655 333333
Q ss_pred hhcC-CCCEEe-cCCCCCCCcchh
Q 003466 300 YLRN-RVPVLV-LPPLPQDSSNDL 321 (818)
Q Consensus 300 ~~~~-~~pvlg-iP~~~~~~~~~~ 321 (818)
.... +.+|+| ||+.+.+..-++
T Consensus 205 ~~~~~~~~vlg~iP~d~~v~~~dl 228 (255)
T COG3640 205 LAEELGLEVLGVIPYDPEVVEADL 228 (255)
T ss_pred hhhccCCeEEEEccCCHHHHhccc
Confidence 3333 999999 999988765444
No 370
>PRK15029 arginine decarboxylase; Provisional
Probab=97.78 E-value=0.0014 Score=79.71 Aligned_cols=47 Identities=15% Similarity=0.034 Sum_probs=37.8
Q ss_pred HHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+..+.+.|.++||.+--. .+.+.+..+...|++++++++++|.+..+
T Consensus 556 ~~~l~~~L~~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 556 AALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred HHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 446888888899999754 46777888888999999999998887644
No 371
>cd03110 Fer4_NifH_child This protein family's function is unkown. It contains nucleotide binding site. It uses NTP as energy source to transfer electron or ion.
Probab=97.76 E-value=0.0013 Score=66.11 Aligned_cols=85 Identities=20% Similarity=0.260 Sum_probs=59.7
Q ss_pred CCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCC--CCHHH
Q 003466 219 KMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGL--VNEVP 296 (818)
Q Consensus 219 ~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~--~~~~~ 296 (818)
+.+|++||.+.+|... .........+ -+|+|+.....++..+...++.++..+.++ ++|+|++.. ...+.
T Consensus 91 ~~~d~viiDtpp~~~~------~~~~~l~~aD-~vliv~~~~~~~~~~~~~~~~~l~~~~~~~-~vV~N~~~~~~~~~~~ 162 (179)
T cd03110 91 EGAELIIIDGPPGIGC------PVIASLTGAD-AALLVTEPTPSGLHDLERAVELVRHFGIPV-GVVINKYDLNDEIAEE 162 (179)
T ss_pred cCCCEEEEECcCCCcH------HHHHHHHcCC-EEEEEecCCcccHHHHHHHHHHHHHcCCCE-EEEEeCCCCCcchHHH
Confidence 3599999999887532 1222222222 367888888888999888889888888775 899999843 22334
Q ss_pred HHHhhcC-CCCEEe-cC
Q 003466 297 LMSYLRN-RVPVLV-LP 311 (818)
Q Consensus 297 l~~~~~~-~~pvlg-iP 311 (818)
++++++. ++|++| ||
T Consensus 163 ~~~~~~~~~~~vl~~ip 179 (179)
T cd03110 163 IEDYCEEEGIPILGKIP 179 (179)
T ss_pred HHHHHHHcCCCeEEeCC
Confidence 5555544 999999 87
No 372
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=97.70 E-value=0.0015 Score=73.53 Aligned_cols=47 Identities=9% Similarity=-0.120 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
...+...+.++|+++.+. .+.+|+++....|.+|||+++++|+++++
T Consensus 308 ~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 308 DKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred HHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 345667888999998543 26799999999999999999999998764
No 373
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=97.69 E-value=0.0035 Score=69.37 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=68.3
Q ss_pred CChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHH
Q 003466 192 VGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAY 271 (818)
Q Consensus 192 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~ 271 (818)
+..+.+.+.++.+.+. ||+|||-..++.. .....+....+. ||+|+....-++..+...+
T Consensus 189 ~~~~~l~~~l~~l~~~-------------~D~VIID~p~~~~------~~~~~~L~~AD~-vliV~~~~~~sl~~a~r~l 248 (322)
T TIGR03815 189 LPPAAVRAVLDAARRG-------------GDLVVVDLPRRLT------PAAETALESADL-VLVVVPADVRAVAAAARVC 248 (322)
T ss_pred CCHHHHHHHHHHHHhc-------------CCEEEEeCCCCCC------HHHHHHHHHCCE-EEEEcCCcHHHHHHHHHHH
Confidence 3445566666655544 9999999976431 123444444443 7788888877777777777
Q ss_pred HHHHhCCCcEEEEEEccC--CCCCHHHHHHhhcCCCCEEe-cCCCCCC
Q 003466 272 ESLKLRGYDVVAVVFEDH--GLVNEVPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 272 ~~l~~~~~~v~gvi~N~~--~~~~~~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
+.++..+.++ .+|+|+. .....+.+++.+ +.|+++ ||+.+..
T Consensus 249 ~~l~~~~~~~-~lVv~~~~~~~~~~~~i~~~l--g~~v~~~Ip~d~~v 293 (322)
T TIGR03815 249 PELGRRNPDL-RLVVRGPAPAGLDPEEIAESL--GLPLLGEVRDQRGL 293 (322)
T ss_pred HHHhhhCCCe-EEEEeCCCCCCCCHHHHHHHh--CCCceeeCCCChhH
Confidence 7777655444 5678876 234567788888 999999 9987653
No 374
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=97.69 E-value=0.0032 Score=70.52 Aligned_cols=46 Identities=13% Similarity=-0.057 Sum_probs=37.7
Q ss_pred HHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 761 ASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 761 ~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
..+.+.+.++|+.+.+. ...+|+++-...|+||||.++++|++.++
T Consensus 299 ~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 299 KRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred HHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 45667888999966553 26899999999999999999999988654
No 375
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=97.65 E-value=0.0091 Score=66.30 Aligned_cols=184 Identities=16% Similarity=0.166 Sum_probs=113.3
Q ss_pred CCcEEE-EEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccC--cccCCccchhccc---CCCCcE----EE
Q 003466 617 SGCIGA-LIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTG--FWRLGVETTADLL---GCVPDI----AC 686 (818)
Q Consensus 617 ~~~iAA-VIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TG--fGRtG~~~a~e~~---gv~PDi----vt 686 (818)
+.+|.+ +|+.| ++.=|... +++-|..|...|.++++.+|.|||..| |+..+-....+.. ...||- ..
T Consensus 224 ~~kVkGvlitNP--sNPLG~~~-~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivys 300 (471)
T KOG0256|consen 224 GLKVKGVLITNP--SNPLGTTL-SPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYS 300 (471)
T ss_pred CCceeEEEEeCC--CCCCCCcc-CHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEE
Confidence 456765 55566 56667776 788999999999999999999999986 4333211111211 226773 37
Q ss_pred eccccc-CCccccceeecc-hHHHhhccCChH------------------------HHHH----------HHHHHHHcCC
Q 003466 687 YGKLLT-GGVIPLAATLAT-NAVFDSFVGDSK------------------------LWDL----------ELIQQISSHR 730 (818)
Q Consensus 687 lgKgLg-gGy~PlsAvl~~-~~i~~~l~~~~~------------------------~~~~----------~l~~~l~~~~ 730 (818)
+||=+| -| +-+|++-.. +++..+...-+. ++.+ .+.+.|++.+
T Consensus 301 lSKD~GlpG-fRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lg 379 (471)
T KOG0256|consen 301 LSKDFGLPG-FRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALG 379 (471)
T ss_pred eccccCCCc-eEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcC
Confidence 999887 45 688877653 455443221110 1110 1223445555
Q ss_pred CeeEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhC-CceEeecC-------CEEEEECCCCChHHHHHHHHHHHH
Q 003466 731 TVQRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLRED-GVYMRPLG-------NVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 731 ~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~-Gvlv~p~g-------~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
+.---++.|++.=+++..--... ..+.-..+++++.++ ++.+.|+. +..|++.. ++.++.++-++++|.
T Consensus 380 I~cl~s~AGlF~wvDlr~lL~s~--tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA-n~~~~t~~~am~Ri~ 456 (471)
T KOG0256|consen 380 IPCLKSNAGLFCWVDLRKLLTSL--TFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA-NMSEETLEVAMRRLK 456 (471)
T ss_pred CceeecCCeeEEEEEhHHhcCcC--ChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEec-cCCHHHHHHHHHHHH
Confidence 44445678998888875331111 123334578888888 99999842 56666653 466677777888888
Q ss_pred HHHHH
Q 003466 803 QRLEE 807 (818)
Q Consensus 803 ~~l~~ 807 (818)
..+..
T Consensus 457 ~~~~~ 461 (471)
T KOG0256|consen 457 QFLDS 461 (471)
T ss_pred HHHHh
Confidence 88763
No 376
>PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional
Probab=97.62 E-value=0.00092 Score=81.98 Aligned_cols=77 Identities=16% Similarity=0.082 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHH
Q 003466 195 SKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESL 274 (818)
Q Consensus 195 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l 274 (818)
+.+.+.+..+.++ ||+|||.++-.+.++ ...-++... --+|+|+..+.-...++..+++.+
T Consensus 628 ~~~~~ll~~l~~~-------------yD~IIIDtPP~~~~~-----Da~~la~~a-d~~llVvr~~~t~~~~~~~~~~~l 688 (726)
T PRK09841 628 DRMRQLLEWANDH-------------YDLVIVDTPPMLAVS-----DAAVVGRSV-GTSLLVARFGLNTAKEVSLSMQRL 688 (726)
T ss_pred HHHHHHHHHHHhc-------------CCEEEEeCCCccccc-----hHHHHHHhC-CeEEEEEeCCCCCHHHHHHHHHHH
Confidence 4555555555544 999999995422221 123334433 456788888888899999999999
Q ss_pred HhCCCcEEEEEEccCC
Q 003466 275 KLRGYDVVAVVFEDHG 290 (818)
Q Consensus 275 ~~~~~~v~gvi~N~~~ 290 (818)
...+.++.|+|+|++.
T Consensus 689 ~~~~~~~~G~VlN~~~ 704 (726)
T PRK09841 689 EQAGVNIKGAILNGVI 704 (726)
T ss_pred HhCCCceEEEEEeCcc
Confidence 9999999999999983
No 377
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0033 Score=71.01 Aligned_cols=208 Identities=18% Similarity=0.167 Sum_probs=122.3
Q ss_pred CCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGD 519 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~ 519 (818)
..++-...|+++++++=| .+.++-++||-.|+.+++-..+ +.| ..|+..+..|.|.
T Consensus 60 ~~nPT~~~lE~~~a~LEg---~~~~~afsSGmaAI~~~~l~ll-----~~G----------------D~vl~~~~~YG~t 115 (396)
T COG0626 60 TGNPTRDALEEALAELEG---GEDAFAFSSGMAAISTALLALL-----KAG----------------DHVLLPDDLYGGT 115 (396)
T ss_pred CCCccHHHHHHHHHHhhC---CCcEEEecCcHHHHHHHHHHhc-----CCC----------------CEEEecCCccchH
Confidence 347778899999999876 3688889999999999876551 223 3677777778763
Q ss_pred ccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 520 TLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 520 t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
-...-.+- +..|+- +.|-|. .+
T Consensus 116 ~~~~~~~l--------------~~~gi~------------------------------~~~~d~-------~~------- 137 (396)
T COG0626 116 YRLFEKIL--------------QKFGVE------------------------------VTFVDP-------GD------- 137 (396)
T ss_pred HHHHHHHH--------------HhcCeE------------------------------EEEECC-------CC-------
Confidence 22111110 000100 111111 00
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccC
Q 003466 600 YSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLG 679 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~g 679 (818)
.+.+++.+. ++++.+|++|+- .+.---+. + +++|.++|+++|+++|+|+...+ +-+ ++-+.
T Consensus 138 -~~~~~~~~~-------~~~tk~v~lEtP-sNP~l~v~-D---I~~i~~~A~~~g~~vvVDNTfat----P~~--q~PL~ 198 (396)
T COG0626 138 -DEALEAAIK-------EPNTKLVFLETP-SNPLLEVP-D---IPAIARLAKAYGALVVVDNTFAT----PVL--QRPLE 198 (396)
T ss_pred -hHHHHHHhc-------ccCceEEEEeCC-CCcccccc-c---HHHHHHHHHhcCCEEEEECCccc----ccc--cChhh
Confidence 022333342 257899999985 44332222 2 89999999999999999999743 212 22222
Q ss_pred CCCcEEE--ecccccCCc-cccceeec-chHHHhhc--cCCh----H------------------HHH------HHHHHH
Q 003466 680 CVPDIAC--YGKLLTGGV-IPLAATLA-TNAVFDSF--VGDS----K------------------LWD------LELIQQ 725 (818)
Q Consensus 680 v~PDivt--lgKgLggGy-~PlsAvl~-~~~i~~~l--~~~~----~------------------~~~------~~l~~~ 725 (818)
.=.||++ ..|=|+|.- .=.|+|++ ++++.+.+ .... . .++ ..+.+-
T Consensus 199 ~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~ 278 (396)
T COG0626 199 LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTLALRMERHNENALKIAEF 278 (396)
T ss_pred cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 2368885 678888621 12334554 45555543 1111 0 111 124455
Q ss_pred HHcCCCeeEEE------------------eeeeEEEEEEec
Q 003466 726 ISSHRTVQRVV------------------ALGTLCAIELQA 748 (818)
Q Consensus 726 l~~~~~v~~vr------------------g~Gl~~~iel~~ 748 (818)
|+.+|.|..|. |.|.|+++++..
T Consensus 279 L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 279 LADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred HhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 67788887764 588999999976
No 378
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=97.60 E-value=0.0037 Score=75.44 Aligned_cols=47 Identities=19% Similarity=0.104 Sum_probs=38.6
Q ss_pred HHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+..+.+.|.++||.+--. .+.+.|..+...|++++++++++|.+.-+
T Consensus 511 g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 511 AALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred HHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 566788899999999764 47788888889999999999998876643
No 379
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=97.58 E-value=0.001 Score=69.06 Aligned_cols=90 Identities=9% Similarity=0.105 Sum_probs=51.8
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHH---hC-CCcEEEEEEccCCCCC-H
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLK---LR-GYDVVAVVFEDHGLVN-E 294 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~---~~-~~~v~gvi~N~~~~~~-~ 294 (818)
.||+|||-+.|++.... ....++...--.+|+|+....-++..+-...+.++ .. +.++.|+|+|++.... .
T Consensus 116 ~yD~ilID~~g~~~~~~----~~~~l~~~~ad~vliv~~p~~~sl~~~~~l~~~i~~~~~~~~~~~~gvv~N~~~~~~~~ 191 (212)
T cd02117 116 DLDVVLYDVLGDVVCGG----FAMPIREGKADEIYIVTSGEFMALYAANNICKGIRKYAKSGGVRLGGLICNSRNTDRET 191 (212)
T ss_pred CCCEEEEecCCCceecc----cccccccccCcEEEEEecccHHHHHHHHHHHHHHHHhCcccCCcEEEEEEeCCCCccHH
Confidence 49999999965442111 11112222223567788777655544444444443 32 6779999999995432 2
Q ss_pred HHHHHhhcC-CCCEEe-cCCC
Q 003466 295 VPLMSYLRN-RVPVLV-LPPL 313 (818)
Q Consensus 295 ~~l~~~~~~-~~pvlg-iP~~ 313 (818)
+.+++..+. +.|+++ ||+.
T Consensus 192 ~~~~~~~~~~~~~vl~~IP~d 212 (212)
T cd02117 192 ELIDAFAERLGTQVIHFVPRD 212 (212)
T ss_pred HHHHHHHHHcCCCEEEecCCC
Confidence 233333222 899999 9973
No 380
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=97.57 E-value=0.00047 Score=70.65 Aligned_cols=106 Identities=9% Similarity=0.106 Sum_probs=72.4
Q ss_pred CCCChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHH
Q 003466 190 GVVGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTIS 269 (818)
Q Consensus 190 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~ 269 (818)
-.+..+.+...++++.+. .+|++||...-|+-. -+..|-..--..|+|+.....++..+--
T Consensus 95 dalt~E~v~~vv~eL~~~------------~fDyIi~DsPAGIE~-------G~~~A~~~Ad~AiVVtnPEvSsVRDsDR 155 (272)
T COG2894 95 DALTPEGVKKVVNELKAM------------DFDYIIIDSPAGIEQ-------GFKNAVYFADEAIVVTNPEVSSVRDSDR 155 (272)
T ss_pred ccCCHHHHHHHHHHHHhc------------CCCEEEecCcchHHH-------HHHhhhhccceEEEEcCCCccccccchh
Confidence 356788888888887743 399999988554433 3445555555678888888777766555
Q ss_pred HHHHHHhCC------C-cEEEEEEccC--------CCCCHHHHHHhhcCCCCEEe-cCCCCCC
Q 003466 270 AYESLKLRG------Y-DVVAVVFEDH--------GLVNEVPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 270 ~~~~l~~~~------~-~v~gvi~N~~--------~~~~~~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
-+.+|...+ - .-.-+|+||+ ..-..+.+.+.+ .+|++| ||..++.
T Consensus 156 iiGlLesk~~rae~~~~~~~~llvnR~~p~~v~~GeMlsv~Dv~~iL--~i~liGiiPed~~V 216 (272)
T COG2894 156 IIGLLESKSRRAEIGEEPKEHLLLNRYRPEMVKRGEMLSVEDVLEIL--SIPLIGVIPEDQDV 216 (272)
T ss_pred heeehhcccchhhcCCcccceEEEEccCHHHhccCCcccHHHHHHHh--CCceEEeecCchhh
Confidence 555555433 1 1257899997 233567778888 999999 9987654
No 381
>PRK11519 tyrosine kinase; Provisional
Probab=97.56 E-value=0.0016 Score=79.75 Aligned_cols=76 Identities=12% Similarity=0.142 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHH
Q 003466 195 SKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESL 274 (818)
Q Consensus 195 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l 274 (818)
+.+.+.++.+..+ ||+|||.++ |...-....-+++..+.. |+|+..+.-.......+++.+
T Consensus 623 ~~~~~ll~~l~~~-------------yD~ViiDtp-----P~~~v~Da~~l~~~~d~~-l~Vvr~~~t~~~~~~~~~~~l 683 (719)
T PRK11519 623 ERFAELVNWASKN-------------YDLVLIDTP-----PILAVTDAAIVGRHVGTT-LMVARYAVNTLKEVETSLSRF 683 (719)
T ss_pred HHHHHHHHHHHhc-------------CCEEEEeCC-----CcccchHHHHHHHHCCeE-EEEEeCCCCCHHHHHHHHHHH
Confidence 3455555555544 999999994 322112234466666655 577777777788888899999
Q ss_pred HhCCCcEEEEEEccC
Q 003466 275 KLRGYDVVAVVFEDH 289 (818)
Q Consensus 275 ~~~~~~v~gvi~N~~ 289 (818)
+..+.++.|+|+|++
T Consensus 684 ~~~~~~~~G~VlN~v 698 (719)
T PRK11519 684 EQNGIPVKGVILNSI 698 (719)
T ss_pred HhCCCCeEEEEEeCC
Confidence 999999999999998
No 382
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=97.53 E-value=0.0015 Score=72.59 Aligned_cols=212 Identities=12% Similarity=0.083 Sum_probs=127.6
Q ss_pred CHHHHHHHHHhhhhccccc--CCCCCChhHHHHHHHHHhccCCC--CCCcEEEeCChhHHHHHHHHHHHHHhhhcccccc
Q 003466 418 QIELARDMGYTAARFGHVM--FPENVYEPALECAELLLQGVGKG--WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLV 493 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~--~~~~~~~~~~eLae~L~~~~~~~--~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~ 493 (818)
..-|.+|+++.+....... ..-+..+....|++++.++.+.. ..+.|+.++.+.+|.-.++-... ..|
T Consensus 46 P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~-----~~G--- 117 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL-----NPG--- 117 (420)
T ss_pred cHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc-----CCC---
Confidence 3447777777776542211 11233556778888888855431 13579999999999988877551 223
Q ss_pred cccCCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhcc
Q 003466 494 DFLGKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIV 573 (818)
Q Consensus 494 ~~~~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~ 573 (818)
..||.++-.|-........+++.+.+... -.. .+. ++.+. |
T Consensus 118 -------------DeVii~eP~fd~Y~~~~~maG~tpv~v~~-----~~~-------------~g~--~~s~~-~----- 158 (420)
T KOG0257|consen 118 -------------DEVIVFEPFFDCYIPQVVMAGGTPVFVPL-----KPK-------------EGN--VSSSD-W----- 158 (420)
T ss_pred -------------CEEEEecCcchhhhhHHhhcCCcceeecc-----ccc-------------ccc--ccCcc-c-----
Confidence 37999999988766555555544433221 000 000 11111 1
Q ss_pred ccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhc
Q 003466 574 EHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNR 653 (818)
Q Consensus 574 ~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~ 653 (818)
..| .+.+|..+. ++..+||+-.= ++-.|-+. +.+-|++|.+||++|
T Consensus 159 ------~~D------------------~~~le~~~t--------~kTk~Ii~ntP-hNPtGkvf-sReeLe~ia~l~~k~ 204 (420)
T KOG0257|consen 159 ------TLD------------------PEELESKIT--------EKTKAIILNTP-HNPTGKVF-SREELERIAELCKKH 204 (420)
T ss_pred ------cCC------------------hHHHHhhcc--------CCccEEEEeCC-CCCcCccc-CHHHHHHHHHHHHHC
Confidence 122 155666664 34555555542 67778777 899999999999999
Q ss_pred CCcEEEeecccCcccCCc---cchhc--ccCCCCcEEEecccccC-CccccceeecchHHHhhc
Q 003466 654 KIPVIFDEVFTGFWRLGV---ETTAD--LLGCVPDIACYGKLLTG-GVIPLAATLATNAVFDSF 711 (818)
Q Consensus 654 gilLI~DEV~TGfGRtG~---~~a~e--~~gv~PDivtlgKgLgg-Gy~PlsAvl~~~~i~~~l 711 (818)
|+++|.|||.--+=-.|. .+++. .|..+--+--+||..|- | .-+|-+++.+.++...
T Consensus 205 ~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TG-WrlGW~igp~~L~~~~ 267 (420)
T KOG0257|consen 205 GLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTG-WRLGWAIGPKHLYSAL 267 (420)
T ss_pred CEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeee-eeeeeeechHHhhhhH
Confidence 999999999864433442 22221 11122223468997762 4 6888899988777644
No 383
>KOG3022 consensus Predicted ATPase, nucleotide-binding [Cell cycle control, cell division, chromosome partitioning]
Probab=97.53 E-value=0.0016 Score=69.10 Aligned_cols=91 Identities=16% Similarity=0.126 Sum_probs=65.4
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccC----------
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDH---------- 289 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~---------- 289 (818)
.-|++||..-=|..+ +..+..+.++.- .-+|+|+....-++..+.-.+.+++..+++|.|+|-|..
T Consensus 156 ~lDyLviDtPPGtsD---ehls~~~~~~~~-~gAviVTTPQ~vAl~Dv~K~i~fc~K~~I~ilGvVENMs~f~Cp~C~~~ 231 (300)
T KOG3022|consen 156 ELDYLVIDTPPGTSD---EHLSLVQFLRES-DGAVIVTTPQEVALQDVRKEIDFCRKAGIPILGVVENMSGFVCPKCGHS 231 (300)
T ss_pred CcCEEEEeCCCCCCh---hhhheeeccccc-CceEEEeCchhhhhHHHHhhhhhhhhcCCceEEEEeccccccCCCCCCc
Confidence 469999998322211 223444444442 126899999988899999999999999999999999974
Q ss_pred ----CCCCHHHHHHhhcCCCCEEe-cCCCCCC
Q 003466 290 ----GLVNEVPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 290 ----~~~~~~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
....-+.+.+.+ ++|+|| ||..+.+
T Consensus 232 ~~iF~~gGg~~l~~~~--glp~Lg~iPld~~i 261 (300)
T KOG3022|consen 232 TNIFGSGGGERLAEEL--GLPLLGSLPLDPLI 261 (300)
T ss_pred ceeccCccHHHHHHHc--CCCeEeecCCCHHH
Confidence 122345566666 999999 9987654
No 384
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=97.52 E-value=0.00035 Score=73.35 Aligned_cols=49 Identities=12% Similarity=0.171 Sum_probs=40.5
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCC-CCchH
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPH-DSDSR 91 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~-~~d~~ 91 (818)
|+.+.|+|. +|+||||++..|++.| + ++|.+|+++|+..++... +.|+.
T Consensus 1 m~vi~ivG~-~gsGKTtl~~~l~~~L----~-~~G~~V~viK~~~~~~d~~~~Dt~ 50 (229)
T PRK14494 1 MRAIGVIGF-KDSGKTTLIEKILKNL----K-ERGYRVATAKHTHHEFDKPDTDTY 50 (229)
T ss_pred CeEEEEECC-CCChHHHHHHHHHHHH----H-hCCCeEEEEEecccCCCCCCchHH
Confidence 678999999 8999999999999999 4 889999999997775432 24444
No 385
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.52 E-value=0.0038 Score=70.08 Aligned_cols=169 Identities=17% Similarity=0.074 Sum_probs=104.3
Q ss_pred CChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 441 VYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 441 ~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
.+|....|+..++++-+. ..++.++||-.|.-.|+.... +...+||.+...|+|..
T Consensus 75 ~nPt~~~le~~iaal~ga---~~~l~fsSGmaA~~~al~~L~---------------------~~g~~iV~~~~~Y~gT~ 130 (409)
T KOG0053|consen 75 GNPTRDVLESGIAALEGA---AHALLFSSGMAAITVALLHLL---------------------PAGDHIVATGDVYGGTL 130 (409)
T ss_pred CCCchHHHHHHHHHHhCC---ceEEEecccHHHHHHHHHHhc---------------------CCCCcEEEeCCCcccHH
Confidence 467778899999998773 578999999999999998762 22347999999998843
Q ss_pred cccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 521 LGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 521 ~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
.- +.-... ..|. ...|-|++ +
T Consensus 131 ~~-l~~~~~-------------~~gi------------------------------e~~~vd~~----------~----- 151 (409)
T KOG0053|consen 131 RI-LRKFLP-------------KFGG------------------------------EGDFVDVD----------D----- 151 (409)
T ss_pred HH-HHHHHH-------------HhCc------------------------------eeeeechh----------h-----
Confidence 11 110000 0000 00122210 1
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC 680 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv 680 (818)
.+.++..++ .++-+|.+|.. .+--.-++. +++++++|+++|+++|+|+.+.+. .-++-+..
T Consensus 152 ~~~~~~~i~--------~~t~~V~~ESP-sNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p------~~~~pL~l 212 (409)
T KOG0053|consen 152 LKKILKAIK--------ENTKAVFLESP-SNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSP------YNQDPLPL 212 (409)
T ss_pred HHHHHHhhc--------cCceEEEEECC-CCCcccccc----HHHHHHHHhhCCCEEEEeCCcCcc------cccChhhc
Confidence 134444443 37899999986 443333333 899999999999999999998543 12233333
Q ss_pred CCcEEE--ecccccCCccc-cceeecc-hHHHhhc
Q 003466 681 VPDIAC--YGKLLTGGVIP-LAATLAT-NAVFDSF 711 (818)
Q Consensus 681 ~PDivt--lgKgLggGy~P-lsAvl~~-~~i~~~l 711 (818)
-.||++ ..|=++|.-=- .|+++.+ ++....+
T Consensus 213 GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l 247 (409)
T KOG0053|consen 213 GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRL 247 (409)
T ss_pred CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHH
Confidence 479996 56888863212 2335553 5655444
No 386
>PRK13578 ornithine decarboxylase; Provisional
Probab=97.48 E-value=0.0042 Score=75.04 Aligned_cols=47 Identities=26% Similarity=0.275 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCceEeecC-CEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPLG-NVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~g-~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+..+.+.|.++||.+--.+ +.+.|..+...|+++++.++++|.+.-+
T Consensus 517 g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 517 ATILANYLRENGIVPEKCDLNSILFLLTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred HHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 5678888889999997644 7778888889999999999998887644
No 387
>PLN02368 alanine transaminase
Probab=97.48 E-value=0.0047 Score=70.71 Aligned_cols=190 Identities=14% Similarity=0.051 Sum_probs=109.6
Q ss_pred CCChhHHHHHHHHHhccCCC-CCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCC
Q 003466 440 NVYEPALECAELLLQGVGKG-WASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHG 518 (818)
Q Consensus 440 ~~~~~~~eLae~L~~~~~~~-~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG 518 (818)
+..+....+++.+.+..+.. ..+.+++++++++|...++.... ...| ..|+..+-+|.+
T Consensus 108 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~----~~pG----------------d~Vli~~P~Y~~ 167 (407)
T PLN02368 108 GLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVI----RGEK----------------DGVLVPVPQYPL 167 (407)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHc----CCCC----------------CEEEEeCCCCcc
Confidence 34567777888776543311 12589999999999988888651 1222 368888888887
Q ss_pred CccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHH
Q 003466 519 DTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLAS 598 (818)
Q Consensus 519 ~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~ 598 (818)
....+ ...|.. .+++|-.. -+ .|. -+
T Consensus 168 y~~~~-~~~g~~------------------------------~v~v~~~~-----------~~----~~~--~d------ 193 (407)
T PLN02368 168 YSATI-SLLGGT------------------------------LVPYYLEE-----------SE----NWG--LD------ 193 (407)
T ss_pred HHHHH-HHcCCE------------------------------EEEEeccc-----------cc----CCC--CC------
Confidence 44222 222211 01111000 00 000 00
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEE-EEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCc--cch-
Q 003466 599 IYSSYISQNLLQNPGLKVSGCIG-ALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGV--ETT- 674 (818)
Q Consensus 599 ~~~~~Le~~L~~~~~~~~~~~iA-AVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~--~~a- 674 (818)
.+.+++.+.... ....++. .++.-| ++-.|.+. +.+.+++|.++|++||+++|.||++..|--.|. +..
T Consensus 194 --~~~le~~i~~~~--~~~~~~k~l~l~nP--~NPTG~v~-s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~ 266 (407)
T PLN02368 194 --VNNLRQSVAQAR--SKGITVRAMVIINP--GNPTGQCL-SEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISA 266 (407)
T ss_pred --HHHHHHHHHHHh--hcCCCeEEEEEECC--CCCCCccC-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccH
Confidence 145666654210 0112455 566677 67788766 899999999999999999999999977632232 211
Q ss_pred hccc-CCC------CcEE---Eeccccc--CCccccceee---cchHHHhhc
Q 003466 675 ADLL-GCV------PDIA---CYGKLLT--GGVIPLAATL---ATNAVFDSF 711 (818)
Q Consensus 675 ~e~~-gv~------PDiv---tlgKgLg--gGy~PlsAvl---~~~~i~~~l 711 (818)
.+.. ++. +.++ +|||++. -| +-+|.++ +++++++.+
T Consensus 267 ~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~G-lRiGy~i~~~~~~~li~~~ 317 (407)
T PLN02368 267 KKVLMDMGPPISKEVQLVSFHTVSKGYWGECG-QRGGYFEMTNIPPKTVEEI 317 (407)
T ss_pred HHHHhhhcccccccceEEEEecCCcccccCCc-cceEEEEEeCCCHHHHHHH
Confidence 1110 111 2333 6799984 56 6888888 477766644
No 388
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=97.46 E-value=0.0021 Score=69.05 Aligned_cols=90 Identities=11% Similarity=0.074 Sum_probs=53.2
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHH----hCCCcEEEEEEccCCCCCHH
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLK----LRGYDVVAVVFEDHGLVNEV 295 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~----~~~~~v~gvi~N~~~~~~~~ 295 (818)
+||+|||-+.|++.+.. ....+...+ -||+|+....-++..+...++.++ ..++++.|+|+|+... ..
T Consensus 117 ~yD~viIDt~g~~~~~~-----~~~~l~~AD-~viip~~~~~~sl~~~~~~~~~i~~~~~~~~l~i~giv~N~~~~--~~ 188 (270)
T PRK13185 117 DYDVILFDVLGDVVCGG-----FAAPLQYAD-YALIVTANDFDSIFAANRIAAAIQAKAKNYKVRLAGVIANRSAG--TD 188 (270)
T ss_pred cCCEEEEecCCCcccCc-----ccchhhhCc-EEEEEecCchhhHHHHHHHHHHHHhhhhccCCCceEEEEeccCh--HH
Confidence 49999999965443221 001111111 267777777666666555555544 3456789999999742 22
Q ss_pred HHHHhhcC-CCCEEe-cCCCCCCC
Q 003466 296 PLMSYLRN-RVPVLV-LPPLPQDS 317 (818)
Q Consensus 296 ~l~~~~~~-~~pvlg-iP~~~~~~ 317 (818)
.+++..+. +.++++ ||......
T Consensus 189 ~~~~~~~~~g~~vl~~Ip~~~~i~ 212 (270)
T PRK13185 189 LIDKFNEAVGLKVLAHVPDLDAIR 212 (270)
T ss_pred HHHHHHHHcCCCEEEECCCCcccC
Confidence 33333322 889999 98775543
No 389
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=97.44 E-value=0.00093 Score=71.49 Aligned_cols=64 Identities=28% Similarity=0.137 Sum_probs=48.5
Q ss_pred CEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCCC---CHHH-----------HHHhhcC--CCCEEecCCCCC
Q 003466 252 PGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGLV---NEVP-----------LMSYLRN--RVPVLVLPPLPQ 315 (818)
Q Consensus 252 pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~~---~~~~-----------l~~~~~~--~~pvlgiP~~~~ 315 (818)
-+++|+....-++..+..+++.++..|+++.|+|+|++... ...+ |++.-.. +.|++-||+.+.
T Consensus 162 ~~vlV~~p~~~~~~e~~r~~~~L~~~g~~v~gvV~N~v~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~i~~vp~~~~ 241 (254)
T cd00550 162 SFRLVCIPEKMSLYETERAIQELAKYGIDVDAVIVNQLLPEDVTNCPFLEARREIQQKYLEEIEELFSDLPVAKLPLLPE 241 (254)
T ss_pred EEEEEeCCChhHHHHHHHHHHHHHHCCCCCCEEEEecCcccccCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEeecCCC
Confidence 48999999999999999999999999999999999998321 1122 2221111 788888998765
No 390
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=97.42 E-value=0.0043 Score=74.90 Aligned_cols=47 Identities=17% Similarity=0.113 Sum_probs=38.5
Q ss_pred HHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
+..+.+.|.++||.+--. .+.+.|..+...|+++++.++++|.+.-+
T Consensus 511 g~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 511 ASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred HHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 556788899999999764 47788888889999999999998876533
No 391
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.37 E-value=0.0079 Score=75.41 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
+.++.++|.++||+++.. ++.++++|.-+.|++|||.++++|.
T Consensus 394 ~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 394 AAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 567899999999999765 5789999999999999999999997
No 392
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=97.35 E-value=0.012 Score=67.65 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=30.7
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
....++++|. +|+||||+++.|++.|. ++|++|...-
T Consensus 94 ~p~vI~lvG~-~GsGKTTtaakLA~~L~-----~~g~kV~lV~ 130 (437)
T PRK00771 94 KPQTIMLVGL-QGSGKTTTAAKLARYFK-----KKGLKVGLVA 130 (437)
T ss_pred CCeEEEEECC-CCCcHHHHHHHHHHHHH-----HcCCeEEEec
Confidence 3457889997 99999999999999994 6788887764
No 393
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=97.31 E-value=0.00083 Score=76.36 Aligned_cols=166 Identities=17% Similarity=0.218 Sum_probs=97.1
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEEeCChhHH-HHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYFSDNGSTA-IEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDT 520 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA-~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t 520 (818)
..+..+..+.+++.+| .++.+|..+||.. |.+++..+ .++.+.|.++...|-+.
T Consensus 65 ~G~I~eAe~~aA~~fG---Ad~t~flvnGsT~g~~a~i~a~----------------------~~~gd~VLv~RN~HkSv 119 (417)
T PF01276_consen 65 EGIIKEAEELAARAFG---ADKTFFLVNGSTSGNQAMIMAL----------------------CRPGDKVLVDRNCHKSV 119 (417)
T ss_dssp BTHHHHHHHHHHHHHT---ESEEEEESSHHHHHHHHHHHHH----------------------TTTTCEEEEETT--HHH
T ss_pred ccHHHHHHHHHHHhcC---CCeEEEEecCchHHHHHHHHHh----------------------cCCCCEEEEcCCcHHHH
Confidence 4466777777888888 4788888777665 45555444 22346788899999999
Q ss_pred cccccccCCC-CCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHH
Q 003466 521 LGAMEAQAPS-PYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASI 599 (818)
Q Consensus 521 ~~als~tg~~-~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~ 599 (818)
+.++-++|.. .|-.+ -....|.. .+++ -. .+.
T Consensus 120 ~~alil~ga~Pvyi~p----~~~~~gi~--------------~~i~--------------~~-------------~~~-- 152 (417)
T PF01276_consen 120 YNALILSGAIPVYIPP----EDNEYGII--------------GGIS--------------PD-------------EFN-- 152 (417)
T ss_dssp HHHHHHHTEEEEEEEE----EE-TTS-B--------------EEB---------------GG-------------GGS--
T ss_pred HHHHHHcCCeEEEecC----CccccCCc--------------cCCC--------------hh-------------hhh--
Confidence 9999998743 12111 00000000 0000 00 000
Q ss_pred HHHHHHHHHhcCCCCCCCCcEE---EEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhc
Q 003466 600 YSSYISQNLLQNPGLKVSGCIG---ALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTAD 676 (818)
Q Consensus 600 ~~~~Le~~L~~~~~~~~~~~iA---AVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e 676 (818)
.+.+++.|++ +++.-+ +||+-|-+ -|+... +++|.++|+++|++|++||+|.+.-+...+ -..
T Consensus 153 -~~~i~~~l~~-----~p~~k~~~~vvlt~PTY---~Gv~~d----i~~I~~~~h~~~~~llvDEAhGah~~F~~l-p~~ 218 (417)
T PF01276_consen 153 -EEDIEEALKE-----HPDAKAPRLVVLTSPTY---YGVCYD----IKEIAEICHKHGIPLLVDEAHGAHFGFHPL-PRS 218 (417)
T ss_dssp -HHHHHHHHHH-----CTTCHCESEEEEESS-T---TSEEE-----HHHHHHHHCCTECEEEEE-TT-TTGGCSGG-GTT
T ss_pred -HHHHHHHHHh-----CccccCceEEEEeCCCC---CeEEEC----HHHHHHHhcccCCEEEEEccccccccCCCC-ccc
Confidence 1567777874 344334 78888864 456665 999999999999999999999654333322 223
Q ss_pred ccCCCCc-------EEEec--ccccC
Q 003466 677 LLGCVPD-------IACYG--KLLTG 693 (818)
Q Consensus 677 ~~gv~PD-------ivtlg--KgLgg 693 (818)
.+..-.| ++|-| |.|++
T Consensus 219 a~~~gad~~~~~~~~vvqS~HKtL~a 244 (417)
T PF01276_consen 219 ALALGADRPNDPGIIVVQSTHKTLPA 244 (417)
T ss_dssp CSSTTSS-CTSBEEEEEEEHHHHSSS
T ss_pred hhhccCccccccceeeeechhhcccc
Confidence 3455667 77655 66665
No 394
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=97.29 E-value=0.0047 Score=66.15 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=31.6
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|+.|-|.| -.||||||+|..|+.+|. ++|++|...=
T Consensus 1 m~~iav~~-KGGvGKTT~~~nLA~~La-----~~G~kVlliD 36 (270)
T cd02040 1 MRQIAIYG-KGGIGKSTTTQNLSAALA-----EMGKKVMIVG 36 (270)
T ss_pred CcEEEEEe-CCcCCHHHHHHHHHHHHH-----hCCCeEEEEE
Confidence 67888886 899999999999999994 7899998765
No 395
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=97.29 E-value=0.0058 Score=66.13 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=30.7
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.++.++++| -+|+||||+++-|+..+. ++|.+|...-
T Consensus 71 ~~~vi~l~G-~~G~GKTTt~akLA~~l~-----~~g~~V~li~ 107 (272)
T TIGR00064 71 KPNVILFVG-VNGVGKTTTIAKLANKLK-----KQGKSVLLAA 107 (272)
T ss_pred CCeEEEEEC-CCCCcHHHHHHHHHHHHH-----hcCCEEEEEe
Confidence 356788888 599999999999999994 7788887764
No 396
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=97.28 E-value=0.0038 Score=67.37 Aligned_cols=91 Identities=11% Similarity=0.068 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHH---hCCCcEEEEEEccCCCCC-H-
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLK---LRGYDVVAVVFEDHGLVN-E- 294 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~---~~~~~v~gvi~N~~~~~~-~- 294 (818)
.||+|||-..|++... .....++...---+|+|+....-++..+-..++.++ ..+.++.|+|+|+..... .
T Consensus 116 ~yD~vlID~~~~~~~~----~~~~~~al~aad~vlip~~p~~~sl~~~~~~~k~l~~~~~~~l~~~GiV~n~~~~~~~~~ 191 (273)
T PRK13232 116 DLDYVFYDVLGDVVCG----GFAMPIREGKAKEIYIVASGELMAIYAANNICKGLAKFAKGGARLGGIICNSRNVDGERE 191 (273)
T ss_pred cCCEEEEecCCCeeEC----CEeccccccccceEEEecCchHHHHHHHHHHHHHHHHHhCCCCceeEEEEeCCCCCccHH
Confidence 3999999996543211 011111111112577888877666655444444444 346889999999863222 2
Q ss_pred --HHHHHhhcCCCCEEe-cCCCCCC
Q 003466 295 --VPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 295 --~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
+.+++.+ +.++++ ||.....
T Consensus 192 ~~e~l~~~~--~~~vl~~Ip~~~~v 214 (273)
T PRK13232 192 LLEAFAKKL--GSQLIHFVPRDNIV 214 (273)
T ss_pred HHHHHHHHh--CCCeEEECCCCHHH
Confidence 3344444 788899 8876543
No 397
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=97.23 E-value=0.019 Score=64.47 Aligned_cols=44 Identities=16% Similarity=-0.099 Sum_probs=35.0
Q ss_pred HHHHHHHHhCCceEeec---CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 761 ASLLKKLREDGVYMRPL---GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 761 ~~~~~~l~e~Gvlv~p~---g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
..+...+.++|+.+.+. .+.+|+++..-.|++|||+++++|++.
T Consensus 307 ~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 307 KEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 34546788899985443 267999999889999999999988874
No 398
>PRK10867 signal recognition particle protein; Provisional
Probab=97.19 E-value=0.015 Score=66.77 Aligned_cols=83 Identities=14% Similarity=0.160 Sum_probs=48.4
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchh---hHhhhC-CCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCCC---
Q 003466 220 MEILCIVETAGGVASPGPSGSLQC---DLYRPF-RLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGLV--- 292 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~---dla~~l-~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~~--- 292 (818)
.+|+|||.+||-+.. ++...- .+++.. -..++||++...| ..++...+.+. +.+++.|+|+|+.+.+
T Consensus 183 ~~DvVIIDTaGrl~~---d~~lm~eL~~i~~~v~p~evllVlda~~g--q~av~~a~~F~-~~~~i~giIlTKlD~~~rg 256 (433)
T PRK10867 183 GYDVVIVDTAGRLHI---DEELMDELKAIKAAVNPDEILLVVDAMTG--QDAVNTAKAFN-EALGLTGVILTKLDGDARG 256 (433)
T ss_pred CCCEEEEeCCCCccc---CHHHHHHHHHHHHhhCCCeEEEEEecccH--HHHHHHHHHHH-hhCCCCEEEEeCccCcccc
Confidence 489999999995432 111121 222222 2357999997543 33333334443 2578899999998422
Q ss_pred -CHHHHHHhhcCCCCEEec
Q 003466 293 -NEVPLMSYLRNRVPVLVL 310 (818)
Q Consensus 293 -~~~~l~~~~~~~~pvlgi 310 (818)
..-.+...+ ++|+..+
T Consensus 257 G~alsi~~~~--~~PI~fi 273 (433)
T PRK10867 257 GAALSIRAVT--GKPIKFI 273 (433)
T ss_pred cHHHHHHHHH--CcCEEEE
Confidence 233445555 8998663
No 399
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=97.18 E-value=0.012 Score=67.45 Aligned_cols=83 Identities=18% Similarity=0.171 Sum_probs=47.7
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhH---hhhC-CCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCC----
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDL---YRPF-RLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGL---- 291 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dl---a~~l-~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~---- 291 (818)
.+|+|||.++|-... +.....++ .+.+ -..++||++...| ..++.....+. ..+.+.|+|+|+...
T Consensus 182 ~~DvVIIDTaGr~~~---d~~l~~eL~~i~~~~~p~e~lLVvda~tg--q~~~~~a~~f~-~~v~i~giIlTKlD~~~~~ 255 (428)
T TIGR00959 182 GFDVVIVDTAGRLQI---DEELMEELAAIKEILNPDEILLVVDAMTG--QDAVNTAKTFN-ERLGLTGVVLTKLDGDARG 255 (428)
T ss_pred CCCEEEEeCCCcccc---CHHHHHHHHHHHHhhCCceEEEEEeccch--HHHHHHHHHHH-hhCCCCEEEEeCccCcccc
Confidence 489999999995431 11122222 2222 2347999997644 23333333333 346789999999842
Q ss_pred CCHHHHHHhhcCCCCEEec
Q 003466 292 VNEVPLMSYLRNRVPVLVL 310 (818)
Q Consensus 292 ~~~~~l~~~~~~~~pvlgi 310 (818)
.....+...+ ++|+.-+
T Consensus 256 G~~lsi~~~~--~~PI~fi 272 (428)
T TIGR00959 256 GAALSVRSVT--GKPIKFI 272 (428)
T ss_pred cHHHHHHHHH--CcCEEEE
Confidence 2233444555 8998663
No 400
>COG0455 flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]
Probab=97.18 E-value=0.0061 Score=65.50 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=72.5
Q ss_pred CCChhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHH
Q 003466 191 VVGDSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISA 270 (818)
Q Consensus 191 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~ 270 (818)
.+..++..+.++++... +|++|+-...|+.-+. ....... --+|+|+....-++..+..+
T Consensus 96 ~~~~~~~~~~~~~l~~~-------------~D~iliD~~aGl~~~~------~~~~~~s-d~~viVt~pe~~si~~A~~~ 155 (262)
T COG0455 96 KLDPEDLEDVIKELEEL-------------YDYILIDTGAGLSRDT------LSFILSS-DELVIVTTPEPTSITDAYKT 155 (262)
T ss_pred hcCHHHHHHHHHHHHhc-------------CCEEEEeCCCCccHHH------HHHHHhc-CcEEEEeCCCcchHHHHHHH
Confidence 45667777777777765 7999999866654332 2222222 55788899999999999999
Q ss_pred HHHHHhCCCcEEE--EEEccCC--CCCHHH---HHHhhcCCCCEEe-cCCCC
Q 003466 271 YESLKLRGYDVVA--VVFEDHG--LVNEVP---LMSYLRNRVPVLV-LPPLP 314 (818)
Q Consensus 271 ~~~l~~~~~~v~g--vi~N~~~--~~~~~~---l~~~~~~~~pvlg-iP~~~ 314 (818)
++.+...+....+ +|+|++. .+..+. +.+... .+|.+. +|+++
T Consensus 156 i~~~~~~~~~~~~~~vV~N~v~~~~e~~~~~~~~~~~~~-~~~~~~~i~~~~ 206 (262)
T COG0455 156 IKILSKLGLDLLGRRVVLNRVRSTKEGVDVAALLIQVVK-QVPVLQVIPFDP 206 (262)
T ss_pred HHHHHHcCCccccceEEEEecccccchhHHHHHHHHHHH-hCCceeEeccCh
Confidence 9999999999888 9999993 232222 222222 566777 89888
No 401
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=97.16 E-value=0.0049 Score=66.16 Aligned_cols=88 Identities=11% Similarity=0.097 Sum_probs=52.2
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHh----CCCcEEEEEEccCCCC-CH
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKL----RGYDVVAVVFEDHGLV-NE 294 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~----~~~~v~gvi~N~~~~~-~~ 294 (818)
.||+|||-+.|++..+... . .....+. +|+|+....-++..+...++.++. .++++.|||+|++... ..
T Consensus 115 ~yD~ViID~~~~~~~~~~~---~--~l~aAD~-vlip~~~~~~sl~~~~~l~~~i~~~~~~~~l~~~gIV~N~~~~~~~~ 188 (268)
T TIGR01281 115 DYDVILFDVLGDVVCGGFA---T--PLQYADY-ALVVAANDFDALFAANRIAASVQEKAKNYDVRLAGIIGNRSDATDLI 188 (268)
T ss_pred cCCEEEEecCCccccCccc---c--chhhcCE-EEEEecCchhHHHHHHHHHHHHHHHhhcCCCceEEEEEeCCChHHHH
Confidence 4999999997765443211 0 1112222 556666665566655555554442 4578899999998432 22
Q ss_pred HHHHHhhcCCCCEEe-cCCCCC
Q 003466 295 VPLMSYLRNRVPVLV-LPPLPQ 315 (818)
Q Consensus 295 ~~l~~~~~~~~pvlg-iP~~~~ 315 (818)
+.+.+.+ +.|+++ ||....
T Consensus 189 ~~~~~~~--~~~vl~~I~~~~~ 208 (268)
T TIGR01281 189 ERFNERV--GMPVLGVVPDLEV 208 (268)
T ss_pred HHHHHHc--CCCEEEEcCCChH
Confidence 2233334 899999 887654
No 402
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=97.14 E-value=0.0062 Score=66.49 Aligned_cols=89 Identities=13% Similarity=0.095 Sum_probs=52.1
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHh----CCCcEEEEEEccCC-CCCH
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKL----RGYDVVAVVFEDHG-LVNE 294 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~----~~~~v~gvi~N~~~-~~~~ 294 (818)
.||++||-+.|++..+. . +......+ -||+|+....-++..+-..++.++. .++++.|+|+|++. ....
T Consensus 115 ~yD~IiIDt~~~l~~~a----~-~aal~~AD-~viIp~~p~~~sl~~~~~l~~~i~~~~~~~~l~~~gvv~n~~~~~~~~ 188 (290)
T CHL00072 115 EYDIILFDVLGDVVCGG----F-AAPLNYAD-YCIIITDNGFDALFAANRIAASVREKARTHPLRLAGLVGNRTSKRDLI 188 (290)
T ss_pred cCCEEEEecCCcceech----h-hhhhhcCC-EEEEEecCCHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCchhHH
Confidence 49999999966533221 0 01111111 2667777775565555555544442 35778999999984 2223
Q ss_pred HHHHHhhcCCCCEEe-cCCCCCC
Q 003466 295 VPLMSYLRNRVPVLV-LPPLPQD 316 (818)
Q Consensus 295 ~~l~~~~~~~~pvlg-iP~~~~~ 316 (818)
+.+.+.+ +.|+++ ||+....
T Consensus 189 ~~~~~~~--~~~vl~~Ip~~~~v 209 (290)
T CHL00072 189 DKYVEAC--PMPVLEVLPLIEDI 209 (290)
T ss_pred HHHHHHc--CCceEEECCCChHH
Confidence 3333444 889999 9976543
No 403
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=97.13 E-value=0.0071 Score=64.96 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=52.7
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHH----hCCCcEEEEEEccCCCCCHH
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLK----LRGYDVVAVVFEDHGLVNEV 295 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~----~~~~~v~gvi~N~~~~~~~~ 295 (818)
+||+|||-+.|++..+. ....+...+ -||+|+....-++..+...++.++ ..++++.|+|+|++.. ..
T Consensus 115 ~yD~vIIDt~g~~~~~~-----~~~al~~aD-~vlip~~p~~~~l~~~~~~~~~i~~~~~~~~l~~~giV~Nr~~~--~~ 186 (267)
T cd02032 115 EYDVILFDVLGDVVCGG-----FAAPLNYAD-YALIVTDNDFDSIFAANRIAAAVREKAKTYKVRLAGLIANRTDK--TD 186 (267)
T ss_pred cCCEEEEeCCCCccccc-----chhhhhhcC-EEEEEecCCcccHHHHHHHHHHHHHHhhccCCceEEEEEeCCCH--HH
Confidence 49999999976554331 111122222 255566666555555444444433 3467889999999842 12
Q ss_pred HHHHhhcC-CCCEEe-cCCCCCCC
Q 003466 296 PLMSYLRN-RVPVLV-LPPLPQDS 317 (818)
Q Consensus 296 ~l~~~~~~-~~pvlg-iP~~~~~~ 317 (818)
.+++..+. +.|+++ ||+.+...
T Consensus 187 ~i~~~~~~~~~~vl~~Ip~~~~v~ 210 (267)
T cd02032 187 LIDKFVEAVGMPVLAVLPLIEDIR 210 (267)
T ss_pred HHHHHHHhCCCCEEEEecCCcccc
Confidence 23332222 899999 99876654
No 404
>cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.
Probab=97.10 E-value=0.0067 Score=63.25 Aligned_cols=63 Identities=24% Similarity=0.079 Sum_probs=47.7
Q ss_pred CCEEEEeCCCCCCCcCCCCCchhhHhhhCCC----CEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccC
Q 003466 221 EILCIVETAGGVASPGPSGSLQCDLYRPFRL----PGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDH 289 (818)
Q Consensus 221 ~d~vivEGagg~~~p~~~~~~~~dla~~l~~----pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~ 289 (818)
||+|||.+. |. .....+-+...+.. -+|+|+.....++.++...++.++..+.++.|+|+|++
T Consensus 114 yD~IIiD~p-----p~-~~~~~~l~~~~l~~~~~~~vllV~~p~~~s~~~~~~~l~~l~~~~~~~~glVlN~~ 180 (217)
T cd02035 114 YDVIVFDTA-----PT-GHTLRLLVRELLTDPERTSFRLVTLPEKLPLYETERAITELALYGIPVDAVVVNRV 180 (217)
T ss_pred CCEEEECCC-----Cc-hHHHHHHHHHHccCCCceEEEEEeCCCccHHHHHHHHHHHHHHCCCCCCEEEEeCC
Confidence 999999983 22 11111112233322 48999999999999999999999999999999999986
No 405
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=97.09 E-value=0.018 Score=61.70 Aligned_cols=178 Identities=16% Similarity=0.157 Sum_probs=107.2
Q ss_pred CCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEE-E--ecc-ccc
Q 003466 617 SGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIA-C--YGK-LLT 692 (818)
Q Consensus 617 ~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDiv-t--lgK-gLg 692 (818)
.+.+++|++-=- -...|.+. ..+-+.+|.+|++.||++||+|.+. |.---|--|.-...--.+.|+ | +|| ||-
T Consensus 177 ~e~~g~ic~SRP-tNPTGNVl-TdeE~~kldalA~~~giPliIDnAY-g~PFP~iifsd~~~~w~~NiilC~SLSK~GLP 253 (417)
T COG3977 177 GESTGAICVSRP-TNPTGNVL-TDEELAKLDALARQHGIPLIIDNAY-GVPFPGIIFSDATPLWNENIILCMSLSKLGLP 253 (417)
T ss_pred ccccceEEecCC-CCCCCCcc-cHHHHHHHHHHhhhcCCcEEEeccc-CCCCCceecccccccCCCCEEEEeehhhcCCC
Confidence 467888887632 35556655 6788999999999999999999988 442222222211111134544 4 455 444
Q ss_pred CCccccceeecchHHHhhccCChH------------------------HHH---------HHH---HHHHH-cCCC--ee
Q 003466 693 GGVIPLAATLATNAVFDSFVGDSK------------------------LWD---------LEL---IQQIS-SHRT--VQ 733 (818)
Q Consensus 693 gGy~PlsAvl~~~~i~~~l~~~~~------------------------~~~---------~~l---~~~l~-~~~~--v~ 733 (818)
| .-+|.++++++++..+.+-.. .+. ++. .+.++ ..|. -.
T Consensus 254 G--~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~ 331 (417)
T COG3977 254 G--SRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCL 331 (417)
T ss_pred C--cceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcccee
Confidence 4 467789999999886643211 010 110 11121 1221 11
Q ss_pred EEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec--------------CCEEEEECCCCChHHHHHHHHH
Q 003466 734 RVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL--------------GNVIYLMCGPCSSPEVCSQLLL 799 (818)
Q Consensus 734 ~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~--------------g~~ir~~ppl~~t~edId~~~~ 799 (818)
--++.|.++.+-.-++- ......+.++|+.+|+++.|+ +..+|+ .++-+++.|+..+.
T Consensus 332 iHkpEGAIFlWLWf~dL------PItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rm--n~~~~~~~ie~Gva 403 (417)
T COG3977 332 IHKPEGAIFLWLWFKDL------PITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRM--NYVPEPEKIEKGVA 403 (417)
T ss_pred eecCCcceeehhhhccC------CCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEE--ecCCCHHHHHHHHH
Confidence 23567776665443331 023667899999999999872 245554 45567889999999
Q ss_pred HHHHHHHH
Q 003466 800 KLYQRLEE 807 (818)
Q Consensus 800 ~l~~~l~~ 807 (818)
+|.+.+++
T Consensus 404 ~lae~ve~ 411 (417)
T COG3977 404 ILAEEVER 411 (417)
T ss_pred HHHHHHHH
Confidence 98877654
No 406
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=97.07 E-value=0.043 Score=62.88 Aligned_cols=35 Identities=14% Similarity=0.053 Sum_probs=29.4
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..++++|. +|+||||+++.|+.+|. ++|.+|...-
T Consensus 101 ~vi~lvG~-~GvGKTTtaaKLA~~l~-----~~G~kV~lV~ 135 (429)
T TIGR01425 101 NVIMFVGL-QGSGKTTTCTKLAYYYQ-----RKGFKPCLVC 135 (429)
T ss_pred eEEEEECC-CCCCHHHHHHHHHHHHH-----HCCCCEEEEc
Confidence 46888996 99999999999999994 6788877664
No 407
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.02 E-value=0.056 Score=60.18 Aligned_cols=155 Identities=15% Similarity=0.181 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHHhcCCcEEEeeccc-CcccCCccchhcc-cCCCCcEE--EecccccCCccccce-eecch-HHHhhcc
Q 003466 639 DPLFQRILVKECQNRKIPVIFDEVFT-GFWRLGVETTADL-LGCVPDIA--CYGKLLTGGVIPLAA-TLATN-AVFDSFV 712 (818)
Q Consensus 639 p~~fl~~LreLc~~~gilLI~DEV~T-GfGRtG~~~a~e~-~gv~PDiv--tlgKgLggGy~PlsA-vl~~~-~i~~~l~ 712 (818)
-+--++++|++|++-|+.|.+|=+|- |+ .-| +.++. .. ..|++ |.=|.|-| |-|+ +++++ ++.+.+.
T Consensus 179 r~id~~~~reIad~VGA~L~~DmAHiaGL-VA~--G~~p~P~~-~AdvVTtTTHKTlrG---PrGG~Il~~~eel~kkin 251 (413)
T COG0112 179 RPIDFKRFREIADEVGAYLMVDMAHVAGL-IAG--GVHPNPLP-HADVVTTTTHKTLRG---PRGGIILTNDEELAKKIN 251 (413)
T ss_pred cccCHHHHHHHHHHhCceEEehHHHHHHH-Hhc--ccCCCCCC-ccceEeCCcccCCCC---CCceEEEeccHHHHHHhh
Confidence 33348999999999999999998874 33 111 11111 11 25787 56788876 3333 56663 7766554
Q ss_pred CCh-------H---------------------HHH-------HHHHHHHHcCCCeeEEEeee---eEEEEEEecCcccCC
Q 003466 713 GDS-------K---------------------LWD-------LELIQQISSHRTVQRVVALG---TLCAIELQAAGCNAG 754 (818)
Q Consensus 713 ~~~-------~---------------------~~~-------~~l~~~l~~~~~v~~vrg~G---l~~~iel~~~~~~~~ 754 (818)
..- . .+. +.+.+.+...+. . +-.-| .++.+++.+..
T Consensus 252 ~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~-~-vvsGgTdnHl~lVDl~~~~---- 325 (413)
T COG0112 252 SAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGF-K-VVSGGTDNHLVLVDLRSKG---- 325 (413)
T ss_pred hhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCC-e-EecCCccceEEEEEcccCC----
Confidence 311 1 000 123344444332 1 11122 25556665221
Q ss_pred CchHHHHHHHHHHHhCCceEee-----------cCCEEEEECCCC----ChHHHHHHHHHHHHHHHHHHH
Q 003466 755 YGSLYAASLLKKLREDGVYMRP-----------LGNVIYLMCGPC----SSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 755 ~~~~~a~~~~~~l~e~Gvlv~p-----------~g~~ir~~ppl~----~t~edId~~~~~l~~~l~~l~ 809 (818)
.........|-+-||.+.- ...-||+-.|.. +.++|++++.+.|.+++...+
T Consensus 326 ---~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 326 ---LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred ---CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 1244455666677998862 124578877765 458899999999999998744
No 408
>cd02038 FleN-like FleN is a member of the Fer4_NifH superfamily. It shares the common function as an ATPase, with the ATP-binding domain at the N-terminus. In Pseudomonas aeruginosa, FleN gene is involved in regulating the number of flagella and chemotactic motility by influencing FleQ activity.
Probab=97.01 E-value=0.0076 Score=58.31 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=54.4
Q ss_pred CCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhC-CCcEEEEEEccCCCC-CHHHHH
Q 003466 221 EILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLR-GYDVVAVVFEDHGLV-NEVPLM 298 (818)
Q Consensus 221 ~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~-~~~v~gvi~N~~~~~-~~~~l~ 298 (818)
+|++||.+.+++ +.....+++..+. +|+|+....-++..+...++.+... +..-.++|+|++... ..+.+.
T Consensus 45 yd~VIiD~p~~~------~~~~~~~l~~aD~-vviv~~~~~~s~~~~~~~l~~l~~~~~~~~~~lVvN~~~~~~~~~~~~ 117 (139)
T cd02038 45 YDYIIIDTGAGI------SDNVLDFFLAADE-VIVVTTPEPTSITDAYALIKKLAKQLRVLNFRVVVNRAESPKEGKKVF 117 (139)
T ss_pred CCEEEEECCCCC------CHHHHHHHHhCCe-EEEEcCCChhHHHHHHHHHHHHHHhcCCCCEEEEEeCCCCHHHHHHHH
Confidence 578999996543 2233456666664 7788888888888877777777643 345678999998432 222222
Q ss_pred Hh--------hcCCCCEEe-cC
Q 003466 299 SY--------LRNRVPVLV-LP 311 (818)
Q Consensus 299 ~~--------~~~~~pvlg-iP 311 (818)
+. ...++|++| ||
T Consensus 118 ~~~~~~~~r~~~~~l~~~~~~~ 139 (139)
T cd02038 118 KRLSNVSNRFLGLSLDYLGFIP 139 (139)
T ss_pred HHHHHHHHHHhCCChhhceecC
Confidence 22 222789998 87
No 409
>PLN02271 serine hydroxymethyltransferase
Probab=97.01 E-value=0.05 Score=63.91 Aligned_cols=67 Identities=12% Similarity=-0.057 Sum_probs=41.4
Q ss_pred CcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCCCcEEE--ecccccC
Q 003466 618 GCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCVPDIAC--YGKLLTG 693 (818)
Q Consensus 618 ~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgKgLgg 693 (818)
.+...||+...... ...+ +++++++|+++|++|++|-+|+ .|-........-+. ..|++| .-|.|.|
T Consensus 297 ~rPKLII~g~Sayp---r~~D----~~~i~eIAdevGA~LmvD~AH~-aGLIa~g~~~sP~~-~aDvvt~TTHKtLrG 365 (586)
T PLN02271 297 FRPKILICGGSSYP---REWD----YARFRQIADKCGAVLMCDMAHI-SGLVAAKECVNPFD-YCDIVTSTTHKSLRG 365 (586)
T ss_pred cCCeEEEECchhcc---CcCC----HHHHHHHHHHcCCEEEEECccc-ccccccCcCCCCCc-CCcEEEeCCcccCCC
Confidence 45667777653111 2222 8899999999999999999996 33332211001111 368875 5699876
No 410
>PRK14495 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/unknown domain fusion protein; Provisional
Probab=96.97 E-value=0.0032 Score=71.48 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=34.0
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEce
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKP 79 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KP 79 (818)
|+.|-|+|. +|+||||++..|+..| + ++|++|+..|=
T Consensus 1 MkVi~IvG~-sgSGKTTLiekLI~~L----~-~rG~rVavIKH 37 (452)
T PRK14495 1 MRVYGIIGW-KDAGKTGLVERLVAAI----A-ARGFSVSTVKH 37 (452)
T ss_pred CcEEEEEec-CCCCHHHHHHHHHHHH----H-hCCCeEEEEec
Confidence 678999998 6999999999999999 4 89999999994
No 411
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=96.97 E-value=0.034 Score=60.04 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=31.0
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..|=|||+ .|+||||+.-+|.+-|. ++|.+|+..-
T Consensus 52 ~viGITG~-PGaGKSTli~~L~~~l~-----~~G~rVaVlA 86 (323)
T COG1703 52 HVIGITGV-PGAGKSTLIEALGRELR-----ERGHRVAVLA 86 (323)
T ss_pred cEEEecCC-CCCchHHHHHHHHHHHH-----HCCcEEEEEE
Confidence 46889998 89999999999999994 8999998775
No 412
>PRK14974 cell division protein FtsY; Provisional
Probab=96.93 E-value=0.017 Score=64.32 Aligned_cols=36 Identities=17% Similarity=0.027 Sum_probs=29.5
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
...++++| -+|+||||+++.|+..|. ++|.+|+..-
T Consensus 140 ~~vi~~~G-~~GvGKTTtiakLA~~l~-----~~g~~V~li~ 175 (336)
T PRK14974 140 PVVIVFVG-VNGTGKTTTIAKLAYYLK-----KNGFSVVIAA 175 (336)
T ss_pred CeEEEEEc-CCCCCHHHHHHHHHHHHH-----HcCCeEEEec
Confidence 45688899 599999999999999994 6787877743
No 413
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=96.92 E-value=0.024 Score=64.00 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=31.1
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.+.++|.|. +|+||||+.+.|+..|. .+|++|+..-
T Consensus 241 ~~vI~LVGp-tGvGKTTTiaKLA~~L~-----~~GkkVglI~ 276 (436)
T PRK11889 241 VQTIALIGP-TGVGKTTTLAKMAWQFH-----GKKKTVGFIT 276 (436)
T ss_pred CcEEEEECC-CCCcHHHHHHHHHHHHH-----HcCCcEEEEe
Confidence 357899999 99999999999999984 7788888765
No 414
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=96.91 E-value=0.03 Score=62.02 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=29.7
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
...+.+.| -+|+||||++..|+..+. .+|.+|...-
T Consensus 114 ~~vi~lvG-pnGsGKTTt~~kLA~~l~-----~~g~~V~Li~ 149 (318)
T PRK10416 114 PFVILVVG-VNGVGKTTTIGKLAHKYK-----AQGKKVLLAA 149 (318)
T ss_pred CeEEEEEC-CCCCcHHHHHHHHHHHHH-----hcCCeEEEEe
Confidence 35688999 589999999999999994 6788887654
No 415
>cd03113 CTGs CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain. The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer nascent ammonia to the acceptor substrate at the synthetase domain to form an aminated product. Glutaminase domains have evolved from the same ancestor, whereas the synthetase domains are evolutionarily unrelated and have different functions. This protein family is classified based on the N-terminal synthetase domain.
Probab=96.91 E-value=0.0068 Score=63.64 Aligned_cols=108 Identities=12% Similarity=0.047 Sum_probs=65.8
Q ss_pred hhHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCc--CCCCCchhhHhhhCCCC-EEEEE-------c-CCCC
Q 003466 194 DSKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASP--GPSGSLQCDLYRPFRLP-GILVG-------D-GRLG 262 (818)
Q Consensus 194 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p--~~~~~~~~dla~~l~~p-vilV~-------~-~~~g 262 (818)
-++|.+++.+..+. ...|++|||=-|-+.+. ++.-...-++...++.. +++|- . .+.-
T Consensus 117 t~eIk~~i~~~~~~-----------~~~dv~i~EiGGTvGDiEs~pf~EAirq~~~~~g~~n~~~ihvt~vp~~~~~gE~ 185 (255)
T cd03113 117 TDEIKERIRRVAEK-----------SGADVVIVEIGGTVGDIESLPFLEAIRQMKLELGRENVLFIHVTLVPYLKAAGEL 185 (255)
T ss_pred cHHHHHHHHHhhcc-----------CCCCEEEEEeCCccccccccHHHHHHHHHHHHhCcCcEEEEEEeeeeeecCCCcc
Confidence 35667777766542 34899999986644432 11112333444444432 22221 1 1111
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEEccC---CCCCHHHHHHhhcCCCCEEe-cCCCC
Q 003466 263 GISGTISAYESLKLRGYDVVAVVFEDH---GLVNEVPLMSYLRNRVPVLV-LPPLP 314 (818)
Q Consensus 263 ~i~~~~~~~~~l~~~~~~v~gvi~N~~---~~~~~~~l~~~~~~~~pvlg-iP~~~ 314 (818)
----+-++++.|+++|+.+.+||+|.- ...+.+.|...+ ++|+.+ +|..+
T Consensus 186 KTKPtQhSVeaLRs~GIqPDgIVcRse~pL~e~~keKIAlFc--nVpve~VI~~~d 239 (255)
T cd03113 186 KTKPTQHSVKELRSIGIQPDILVCRSEKPLPPEIREKIALFC--DVPPEAVISAPD 239 (255)
T ss_pred ccCchHHHHHHHHhCCCCCCEEEEeCCCCCchHHHHHHHHhc--CCCHHHeeecCC
Confidence 234456789999999999999999985 345667777777 999998 66544
No 416
>PHA02518 ParA-like protein; Provisional
Probab=96.86 E-value=0.031 Score=57.32 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=31.2
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
+.|-|++.-.||||||++..|..+|. ++|++|...-
T Consensus 1 ~ii~v~~~KGGvGKTT~a~~la~~la-----~~g~~vlliD 36 (211)
T PHA02518 1 KIIAVLNQKGGAGKTTVATNLASWLH-----ADGHKVLLVD 36 (211)
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHH-----hCCCeEEEEe
Confidence 35789999999999999999999994 7898887665
No 417
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family. The model describes the exopolysaccharide transport protein family in bacteria. The transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed atleast seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export.
Probab=96.86 E-value=0.011 Score=73.08 Aligned_cols=64 Identities=9% Similarity=-0.086 Sum_probs=46.5
Q ss_pred CCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCC
Q 003466 221 EILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHG 290 (818)
Q Consensus 221 ~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~ 290 (818)
||+|||.+...+.+. ...-++...+. ||+|+..+.-.......+++.++..+.++.|||+|++.
T Consensus 656 yD~IiID~pp~~~~~-----d~~~l~~~~D~-vl~v~~~~~~~~~~~~~~~~~l~~~~~~~~GvvlN~~~ 719 (754)
T TIGR01005 656 SDCVVVDVGTADPVR-----DMRAAARLAII-MLLVTAYDRVVVECGRADAQGISRLNGEVTGVFLNMLD 719 (754)
T ss_pred CCEEEEcCCCcchhH-----HHHHhhhhCCe-EEEEEEeCceeHHHHHHHHHHHHhcCCceEEEEecCCC
Confidence 999999995533221 22233433333 56888877778888888999999888899999999983
No 418
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=96.84 E-value=0.014 Score=61.52 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=33.5
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|+.|.|++.-.|+||||++..|+.+|. ++|++|...=
T Consensus 1 m~iI~v~s~KGGvGKTt~a~nla~~la-----~~g~~VlliD 37 (246)
T TIGR03371 1 MKVIAIVGVKGGVGKTTLTANLASALK-----LLGEPVLAID 37 (246)
T ss_pred CcEEEEEeCCCCccHHHHHHHHHHHHH-----hCCCcEEEEe
Confidence 678999999999999999999999994 7899988775
No 419
>PRK10818 cell division inhibitor MinD; Provisional
Probab=96.83 E-value=0.041 Score=59.12 Aligned_cols=38 Identities=24% Similarity=0.280 Sum_probs=33.7
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|++.|-|++.-.||||||+++.|..+|. ++|++|...=
T Consensus 1 m~kviav~s~KGGvGKTt~a~nlA~~la-----~~g~~vllvD 38 (270)
T PRK10818 1 MARIIVVTSGKGGVGKTTSSAAIATGLA-----QKGKKTVVID 38 (270)
T ss_pred CceEEEEEeCCCCCcHHHHHHHHHHHHH-----HCCCeEEEEE
Confidence 4688999999999999999999999994 7788887765
No 420
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=96.82 E-value=0.079 Score=59.96 Aligned_cols=128 Identities=13% Similarity=0.076 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCCCCCch---hhHhhhCC-CCEEEEEcCCCChHHHHHHH
Q 003466 195 SKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGPSGSLQ---CDLYRPFR-LPGILVGDGRLGGISGTISA 270 (818)
Q Consensus 195 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~~~~~~---~dla~~l~-~pvilV~~~~~g~i~~~~~~ 270 (818)
+...+.+++.... .+|++||.+||=+.. +..++ .+|.+.++ ..++||+|.-.|- .+...
T Consensus 169 ~Iak~al~~ak~~------------~~DvvIvDTAGRl~i---de~Lm~El~~Ik~~~~P~E~llVvDam~GQ--dA~~~ 231 (451)
T COG0541 169 EIAKAALEKAKEE------------GYDVVIVDTAGRLHI---DEELMDELKEIKEVINPDETLLVVDAMIGQ--DAVNT 231 (451)
T ss_pred HHHHHHHHHHHHc------------CCCEEEEeCCCcccc---cHHHHHHHHHHHhhcCCCeEEEEEecccch--HHHHH
Confidence 3445666665544 389999999994443 22233 33444443 2389999976552 22222
Q ss_pred HHHHHhCCCcEEEEEEccCCCC----CHHHHHHhhcCCCCEE--ec----CCCCCCCcchhhhhhhhhhhhHHHHHHHHH
Q 003466 271 YESLKLRGYDVVAVVFEDHGLV----NEVPLMSYLRNRVPVL--VL----PPLPQDSSNDLMEWFDESHNVFDSLKNIML 340 (818)
Q Consensus 271 ~~~l~~~~~~v~gvi~N~~~~~----~~~~l~~~~~~~~pvl--gi----P~~~~~~~~~~~~~l~~~~~~l~~l~~~l~ 340 (818)
.+.+. +.+.|.|||+.+.+.+ ..--++..+ +.|+- |. ..++......++.-+-- .+.+.+|.+-..
T Consensus 232 A~aF~-e~l~itGvIlTKlDGdaRGGaALS~~~~t--g~PIkFiGtGEki~dLE~F~P~R~asRILG-MGDv~sLvEk~~ 307 (451)
T COG0541 232 AKAFN-EALGITGVILTKLDGDARGGAALSARAIT--GKPIKFIGTGEKIDDLEPFHPDRFASRILG-MGDVLSLIEKAE 307 (451)
T ss_pred HHHHh-hhcCCceEEEEcccCCCcchHHHhhHHHH--CCCeEEEecCCCcccCCCcChHHHHHHhcC-cccHHHHHHHHH
Confidence 23333 4488999999998322 233355666 77763 43 33344433344333311 245666665555
Q ss_pred HHH
Q 003466 341 LAY 343 (818)
Q Consensus 341 ~~~ 343 (818)
...
T Consensus 308 ~~~ 310 (451)
T COG0541 308 EVV 310 (451)
T ss_pred Hhh
Confidence 443
No 421
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=96.82 E-value=0.068 Score=67.21 Aligned_cols=43 Identities=12% Similarity=0.183 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHHH
Q 003466 761 ASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLYQ 803 (818)
Q Consensus 761 ~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~~ 803 (818)
..+.++|.++||.++.. ++.+++++....|++|||.++++|..
T Consensus 422 ~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 422 DAIADAAAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred HHHHHHHHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 56889999999999865 57899999999999999999999963
No 422
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=96.80 E-value=0.02 Score=61.69 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=29.6
Q ss_pred eEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 39 TFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 39 ~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.|.|.| -.||||||+|..|..+|. ++|++|..+=
T Consensus 2 ~ia~~g-KGGVGKTT~a~nLA~~La-----~~G~~VlliD 35 (275)
T TIGR01287 2 QIAIYG-KGGIGKSTTTQNIAAALA-----EMGKKVMIVG 35 (275)
T ss_pred eeEEeC-CCcCcHHHHHHHHHHHHH-----HCCCeEEEEe
Confidence 577888 899999999999999994 7899988764
No 423
>PRK12727 flagellar biosynthesis regulator FlhF; Provisional
Probab=96.78 E-value=0.037 Score=64.61 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=36.7
Q ss_pred HHHHHHHhccCCCCCCCCCCCCCCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 14 RRILLRLFHHSTFHPQPLDLPLSHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
++.++..+.....- .+.+....-..+.|+|. +|+||||++..|+..+.. + ..+.+|.++-
T Consensus 328 ~~~l~~~L~~~l~v-~~~~~l~~G~vIaLVGP-tGvGKTTtaakLAa~la~--~-~~gkkVaLId 387 (559)
T PRK12727 328 RGLMLGLLSKRLPV-APVDPLERGGVIALVGP-TGAGKTTTIAKLAQRFAA--Q-HAPRDVALVT 387 (559)
T ss_pred HHHHHHHHHHhcCc-CccccccCCCEEEEECC-CCCCHHHHHHHHHHHHHH--h-cCCCceEEEe
Confidence 44555555444321 22222233567888897 699999999999988741 1 1256777664
No 424
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=96.78 E-value=0.017 Score=62.53 Aligned_cols=36 Identities=14% Similarity=0.347 Sum_probs=32.1
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|++|.|.| -.||||||+|..|..+|. ++|++|..+=
T Consensus 1 ~~~i~~~g-KGGVGKTT~a~nLA~~La-----~~G~rVLliD 36 (279)
T PRK13230 1 MRKFCFYG-KGGIGKSTTVCNIAAALA-----ESGKKVLVVG 36 (279)
T ss_pred CcEEEEEC-CCCCcHHHHHHHHHHHHH-----hCCCEEEEEe
Confidence 77899998 899999999999999994 8899988764
No 425
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=96.77 E-value=0.022 Score=65.45 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=30.3
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.+.+++.|. +||||||+++.|+..+.+ . +.|.+|+++.
T Consensus 221 ~~~i~~vGp-tGvGKTTt~~kLA~~~~~--~-~~g~~V~li~ 258 (424)
T PRK05703 221 GGVVALVGP-TGVGKTTTLAKLAARYAL--L-YGKKKVALIT 258 (424)
T ss_pred CcEEEEECC-CCCCHHHHHHHHHHHHHH--h-cCCCeEEEEE
Confidence 457888898 899999999999988720 1 4578898886
No 426
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=96.76 E-value=0.0029 Score=62.68 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=32.7
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccC
Q 003466 40 FQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTG 83 (818)
Q Consensus 40 ~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g 83 (818)
+.|+|. +|+|||+++..|++.| + ++|++|+++|+...+
T Consensus 2 i~i~G~-~gsGKTtl~~~l~~~l----~-~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGP-KNSGKTTLIERLVKAL----K-ARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECC-CCCCHHHHHHHHHHHH----H-hcCCeEEEEeccccc
Confidence 567887 6999999999999999 4 789999999986544
No 427
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Probab=96.75 E-value=0.041 Score=54.95 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=27.0
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 40 FQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 40 ~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
+.++|. +|+|||+++..|+..+. ++|.+|.++-
T Consensus 3 ~~~~G~-~G~GKTt~~~~la~~~~-----~~g~~v~~i~ 35 (173)
T cd03115 3 ILLVGL-QGVGKTTTAAKLALYLK-----KKGKKVLLVA 35 (173)
T ss_pred EEEECC-CCCCHHHHHHHHHHHHH-----HCCCcEEEEE
Confidence 456665 89999999999999984 6688888776
No 428
>PRK13231 nitrogenase reductase-like protein; Reviewed
Probab=96.74 E-value=0.02 Score=61.43 Aligned_cols=94 Identities=11% Similarity=0.097 Sum_probs=54.5
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCC-CCHHHHH
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGL-VNEVPLM 298 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~-~~~~~l~ 298 (818)
+||+|||-..|++.... ....++...---+|+|+....-++..+-..++.++.-+..+.|+|.|+... ...+.++
T Consensus 113 ~yD~ViIDt~~~~~~~~----~~~~~~~~aaD~vlip~~p~~~si~~~~~~~~~i~~~~~~~~~vv~~~~~~~~~~~~~~ 188 (264)
T PRK13231 113 DIDVVIYDVLGDVVCGG----FSVPLREDYADEVYIVTSGEYMSLYAANNIARGIKKLKGKLGGIICNCRGIDNEVEIVS 188 (264)
T ss_pred CCCEEEEecCCCceEcc----ccccccccccceeEEEecCchhHHHHHHHHHHHHHHcCCcceEEEEcCCCCccHHHHHH
Confidence 39999999966432110 000010011124677777777777777777777765555678899887632 2233333
Q ss_pred HhhcC-CCCEEe-cCCCCCCC
Q 003466 299 SYLRN-RVPVLV-LPPLPQDS 317 (818)
Q Consensus 299 ~~~~~-~~pvlg-iP~~~~~~ 317 (818)
+..+. +.++++ ||......
T Consensus 189 ~l~~~~~~~vl~~I~~~~~v~ 209 (264)
T PRK13231 189 EFASRIGSRIIGVIPRSNLVQ 209 (264)
T ss_pred HHHHHhCCCeEEeCCCCHHHH
Confidence 33322 788888 88765543
No 429
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=96.74 E-value=0.26 Score=55.52 Aligned_cols=205 Identities=10% Similarity=0.096 Sum_probs=122.1
Q ss_pred HHHHHHHhcCCCC-CCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCcc--------
Q 003466 602 SYISQNLLQNPGL-KVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVE-------- 672 (818)
Q Consensus 602 ~~Le~~L~~~~~~-~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~-------- 672 (818)
+.|++.+...... .+..+....-+=|..|.-.|... +.+--++|.+|+++||+++|-||+. +|=..+..
T Consensus 185 E~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tl-s~errk~iy~LArKyDfLIVeDdpY-y~Lq~~~y~~~~~~~~ 262 (472)
T KOG0634|consen 185 ESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTL-SLERRKKIYQLARKYDFLIVEDDPY-YFLQMNTYNPSLELES 262 (472)
T ss_pred HHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCcc-CHHHHHHHHHHHHHcCEEEEecCcc-ceeeccccCCCccccC
Confidence 5667777654211 12223445555576688888877 7888999999999999999999998 55344421
Q ss_pred --chhccc-----------CCC---CcEEEecccccCCccccceeecchHHHhhccCChH-------------------H
Q 003466 673 --TTADLL-----------GCV---PDIACYGKLLTGGVIPLAATLATNAVFDSFVGDSK-------------------L 717 (818)
Q Consensus 673 --~a~e~~-----------gv~---PDivtlgKgLggGy~PlsAvl~~~~i~~~l~~~~~-------------------~ 717 (818)
+..+.+ +.. --+-+|||-++-| +-+|-+.+++..++.....+. .
T Consensus 263 p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPG-lRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~ 341 (472)
T KOG0634|consen 263 PAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPG-LRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKR 341 (472)
T ss_pred ccccHHHHHHhhcCCcccccccccEEeccchhhhhcCc-ceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHH
Confidence 110011 111 1134899999999 799999999866654322211 1
Q ss_pred HHH-------------------HHHHHHHc-CCC-e--eEEEeeeeEEEEEEecCcccCCCchH-HHHHHHHHHHhCCce
Q 003466 718 WDL-------------------ELIQQISS-HRT-V--QRVVALGTLCAIELQAAGCNAGYGSL-YAASLLKKLREDGVY 773 (818)
Q Consensus 718 ~~~-------------------~l~~~l~~-~~~-v--~~vrg~Gl~~~iel~~~~~~~~~~~~-~a~~~~~~l~e~Gvl 773 (818)
|.+ .++..+.+ .|. + -.+-..|+++=|++.-.......+-. ....+...+.++||+
T Consensus 342 wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~ 421 (472)
T KOG0634|consen 342 WGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVK 421 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeE
Confidence 111 12233322 232 2 22345688888877511111111112 334455667799999
Q ss_pred Eeec-----------CC-EEEEECCCCChHHHHHHHHHHHHHHHHHHHH
Q 003466 774 MRPL-----------GN-VIYLMCGPCSSPEVCSQLLLKLYQRLEEFDK 810 (818)
Q Consensus 774 v~p~-----------g~-~ir~~ppl~~t~edId~~~~~l~~~l~~l~~ 810 (818)
+.++ +. -+|++-+. ...|++++.+++|..++++.-.
T Consensus 422 ~v~G~~F~v~p~~s~~kiffRls~a~-a~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 422 LVCGSWFMVDPESSWSKIFFRLSIAF-AEPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred EecCceeEEcCccCCCcceEEEEeec-CCHHHHHHHHHHHHHHHHHHhh
Confidence 8741 12 45555554 4567999999999999987543
No 430
>PRK13233 nifH nitrogenase reductase; Reviewed
Probab=96.67 E-value=0.025 Score=60.97 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=30.9
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCC-CCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSS-ANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~-~g~~v~~~K 78 (818)
|++.|-|++ -.||||||+|.-|..+|. + +|+||..+=
T Consensus 1 M~~vIav~~-KGGVGKTT~a~nLA~~La-----~~~G~rvLliD 38 (275)
T PRK13233 1 MTRKIAIYG-KGGIGKSTTTQNTAAAMA-----YFHDKKVFIHG 38 (275)
T ss_pred CceEEEEEc-CCCCcHHHHHHHHHHHHH-----HhcCCeEEEec
Confidence 457788884 899999999999999994 4 599988764
No 431
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional
Probab=96.63 E-value=0.047 Score=61.42 Aligned_cols=36 Identities=22% Similarity=0.354 Sum_probs=29.6
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.+.++|+|. +|+||||+++.|+..+. ++|.+|+++-
T Consensus 206 ~~ii~lvGp-tGvGKTTt~akLA~~l~-----~~g~~V~lIt 241 (407)
T PRK12726 206 HRIISLIGQ-TGVGKTTTLVKLGWQLL-----KQNRTVGFIT 241 (407)
T ss_pred CeEEEEECC-CCCCHHHHHHHHHHHHH-----HcCCeEEEEe
Confidence 456889997 69999999999999884 6788887654
No 432
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=96.56 E-value=0.054 Score=61.49 Aligned_cols=84 Identities=18% Similarity=0.101 Sum_probs=46.8
Q ss_pred CCEEEEeCCCCCCCcCCCC--CchhhHhhhCCC--CEEEEEcCCCChHHHHHHHHHHHH-hCCCcEEEEEEccCC-CCCH
Q 003466 221 EILCIVETAGGVASPGPSG--SLQCDLYRPFRL--PGILVGDGRLGGISGTISAYESLK-LRGYDVVAVVFEDHG-LVNE 294 (818)
Q Consensus 221 ~d~vivEGagg~~~p~~~~--~~~~dla~~l~~--pvilV~~~~~g~i~~~~~~~~~l~-~~~~~v~gvi~N~~~-~~~~ 294 (818)
+|+|||-++|.. +.+.. .-...+....+. .++||.+...+. +... +.+. ...+.+.|+|+.+.+ ....
T Consensus 255 ~DlVLIDTaGr~--~~~~~~l~el~~~l~~~~~~~e~~LVlsat~~~-~~~~---~~~~~~~~~~~~~~I~TKlDet~~~ 328 (388)
T PRK12723 255 FDLVLVDTIGKS--PKDFMKLAEMKELLNACGRDAEFHLAVSSTTKT-SDVK---EIFHQFSPFSYKTVIFTKLDETTCV 328 (388)
T ss_pred CCEEEEcCCCCC--ccCHHHHHHHHHHHHhcCCCCeEEEEEcCCCCH-HHHH---HHHHHhcCCCCCEEEEEeccCCCcc
Confidence 899999999954 32110 011233333433 489999987663 2222 2333 235678999999983 2333
Q ss_pred HHHHHhhcC-CCCEEec
Q 003466 295 VPLMSYLRN-RVPVLVL 310 (818)
Q Consensus 295 ~~l~~~~~~-~~pvlgi 310 (818)
-.+-+.... ++|+.-|
T Consensus 329 G~~l~~~~~~~~Pi~yi 345 (388)
T PRK12723 329 GNLISLIYEMRKEVSYV 345 (388)
T ss_pred hHHHHHHHHHCCCEEEE
Confidence 333332221 7887553
No 433
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=96.54 E-value=0.0081 Score=59.77 Aligned_cols=41 Identities=12% Similarity=0.116 Sum_probs=35.6
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccC
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTG 83 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g 83 (818)
|+.+.|+|. +|+|||+++..|++.| + ++|++|+.+|.-.++
T Consensus 1 m~vi~i~G~-~gsGKTTli~~L~~~l----~-~~g~~V~~iK~~~~~ 41 (159)
T cd03116 1 MKVIGFVGY-SGSGKTTLLEKLIPAL----S-ARGLRVAVIKHDHHD 41 (159)
T ss_pred CeEEEEECC-CCCCHHHHHHHHHHHH----H-HcCCcEEEEEecCCc
Confidence 678999999 6999999999999999 4 789999999965443
No 434
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=96.53 E-value=0.068 Score=56.48 Aligned_cols=37 Identities=22% Similarity=0.283 Sum_probs=33.5
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|+.|.|.+.-.||||||++..|+.+|. ++|++|..+-
T Consensus 1 M~iI~v~n~KGGvGKTT~a~nLA~~la-----~~G~~VlliD 37 (231)
T PRK13849 1 MKLLTFCSFKGGAGKTTALMGLCAALA-----SDGKRVALFE 37 (231)
T ss_pred CeEEEEECCCCCccHHHHHHHHHHHHH-----hCCCcEEEEe
Confidence 678999999999999999999999994 8899988776
No 435
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=96.51 E-value=0.0072 Score=60.09 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=35.7
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEcee
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPI 80 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi 80 (818)
||+-|-|+|. +|+||||+...|++.| + .+|++|+..|=-
T Consensus 1 m~~Il~ivG~-k~SGKTTLie~lv~~L----~-~~G~rVa~iKH~ 39 (161)
T COG1763 1 MMKILGIVGY-KNSGKTTLIEKLVRKL----K-ARGYRVATVKHA 39 (161)
T ss_pred CCcEEEEEec-CCCChhhHHHHHHHHH----H-hCCcEEEEEEec
Confidence 5888999999 8999999999999999 4 899999999943
No 436
>PRK14493 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional
Probab=96.46 E-value=0.011 Score=64.04 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=32.8
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEce
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKP 79 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KP 79 (818)
|+.|-|+|. +|+||||++..|++.|. ++| +|++.|=
T Consensus 1 M~~i~i~G~-~gSGKTTLi~~Li~~L~-----~~G-~V~~IKh 36 (274)
T PRK14493 1 MKVLSIVGY-KATGKTTLVERLVDRLS-----GRG-RVGTVKH 36 (274)
T ss_pred CcEEEEECC-CCCCHHHHHHHHHHHHH-----hCC-CEEEEEE
Confidence 678999999 59999999999999994 889 8999994
No 437
>PRK13236 nitrogenase reductase; Reviewed
Probab=96.44 E-value=0.031 Score=61.19 Aligned_cols=37 Identities=8% Similarity=0.232 Sum_probs=32.2
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.|+.+-+.| -.|||||++++-|..+|. ++|+||..+=
T Consensus 5 ~~~~~~~~G-KGGVGKTt~a~NLA~~La-----~~G~rVLliD 41 (296)
T PRK13236 5 NIRQIAFYG-KGGIGKSTTSQNTLAAMA-----EMGQRILIVG 41 (296)
T ss_pred CceEEEEEC-CCcCCHHHHHHHHHHHHH-----HCCCcEEEEE
Confidence 467777877 789999999999999994 7899999885
No 438
>TIGR00750 lao LAO/AO transport system ATPase. Mutations have also been found that do not phosphorylate the periplasmic binding proteins, yet still allow transport. The ATPase activity of this protein seems to be necessary, however.
Probab=96.40 E-value=0.16 Score=55.71 Aligned_cols=37 Identities=14% Similarity=0.129 Sum_probs=31.9
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.++.+.|+|. +|+||||++..|+..+. ++|.+|..+.
T Consensus 33 ~~~~i~i~G~-~G~GKttl~~~l~~~~~-----~~~~~v~~i~ 69 (300)
T TIGR00750 33 NAHRVGITGT-PGAGKSTLLEALGMELR-----RRGLKVAVIA 69 (300)
T ss_pred CceEEEEECC-CCCCHHHHHHHHHHHHH-----HCCCeEEEEe
Confidence 3667889987 99999999999999994 7799998776
No 439
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=96.33 E-value=0.059 Score=58.17 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=30.9
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|+.|-|.| -.||||||+|.-|..+|. ++|+||..+=
T Consensus 1 m~~iav~~-KGGVGKTT~~~nLA~~La-----~~G~rVLlID 36 (274)
T PRK13235 1 MRKVAIYG-KGGIGKSTTTQNTVAGLA-----EMGKKVMVVG 36 (274)
T ss_pred CCEEEEeC-CCCccHHHHHHHHHHHHH-----HCCCcEEEEe
Confidence 56777776 899999999999999994 8899998874
No 440
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=96.32 E-value=0.043 Score=62.14 Aligned_cols=72 Identities=18% Similarity=0.099 Sum_probs=44.5
Q ss_pred ccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCC-CCcEEE--ecccccCCccccceeecchH
Q 003466 630 HAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGC-VPDIAC--YGKLLTGGVIPLAATLATNA 706 (818)
Q Consensus 630 ~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv-~PDivt--lgKgLggGy~PlsAvl~~~~ 706 (818)
....|.+-+ +++|.++|++|++.|.+|=+..|+.-.-+..-.-..|+ ..|=++ .-|-++-- ++.|+++.+++
T Consensus 204 tt~~Ga~D~----l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P-~~~~~~l~r~~ 278 (373)
T PF00282_consen 204 TTNTGAIDP----LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVP-YGCGVLLVRDK 278 (373)
T ss_dssp -TTTSBB-S----HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-S-SS-EEEEESSG
T ss_pred CcccccccC----HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCC-ccceeEEeecc
Confidence 445577666 99999999999999999998877322222222222344 346554 56777766 47788888764
No 441
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=96.26 E-value=0.12 Score=54.19 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=33.9
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|+.|-+.++-.|+||||.+.+|+..|. ++|.+|..+-
T Consensus 1 M~vItf~s~KGGaGKTT~~~~LAs~la-----~~G~~V~lID 37 (231)
T PF07015_consen 1 MPVITFASSKGGAGKTTAAMALASELA-----ARGARVALID 37 (231)
T ss_pred CCeEEEecCCCCCcHHHHHHHHHHHHH-----HCCCeEEEEe
Confidence 778889999999999999999999994 8899998886
No 442
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=96.21 E-value=1.3 Score=48.43 Aligned_cols=51 Identities=16% Similarity=0.067 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhCCceEeec-CCEEEEECCC-CChHHHHHHHHHHHHHHHHHHH
Q 003466 759 YAASLLKKLREDGVYMRPL-GNVIYLMCGP-CSSPEVCSQLLLKLYQRLEEFD 809 (818)
Q Consensus 759 ~a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl-~~t~edId~~~~~l~~~l~~l~ 809 (818)
.+..+.+.|.++||+.-.. .++|||.|+. -.+-+|+=.+++.|+++|++..
T Consensus 352 ~~~~V~qaLi~rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 352 HGYQVMQALIDRGVIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred cHHHHHHHHHHcCccccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 3677899999999998654 4899998754 5677999999999999998754
No 443
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=96.21 E-value=0.054 Score=58.45 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=63.0
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCV 681 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~ 681 (818)
+.+++.|.+ .+..+|++-=. -++.|+..+ .++...++|++|+++|++|-|-+ + -|.-|.++.|||.
T Consensus 132 e~i~~~lsq-------h~p~~vfv~hg-dsSTgV~q~---~~~~~g~lc~k~~~lllVD~VaS-l--ggt~F~mDewgVD 197 (385)
T KOG2862|consen 132 EEITEKLSQ-------HKPKAVFVTHG-DSSTGVLQD---LLAISGELCHKHEALLLVDTVAS-L--GGTEFEMDEWGVD 197 (385)
T ss_pred HHHHHHHHh-------cCCceEEEEec-Cccccccch---HHHHHHHHhhcCCeEEEEechhh-c--CCccceehhhccc
Confidence 566777763 34445544433 455676553 47888999999999999999985 3 3668999999985
Q ss_pred CcEEEecccccC--CccccceeecchHHHhhcc
Q 003466 682 PDIACYGKLLTG--GVIPLAATLATNAVFDSFV 712 (818)
Q Consensus 682 PDivtlgKgLgg--Gy~PlsAvl~~~~i~~~l~ 712 (818)
-=+.--=|+|++ |. +-+..+++..+.++
T Consensus 198 vaytgSQKaL~aP~GL---siisfS~ka~~~~~ 227 (385)
T KOG2862|consen 198 VAYTGSQKALGAPAGL---SIISFSDKALEAIR 227 (385)
T ss_pred EEEecchhhcCCCCCc---ceeecCHHHHHHHh
Confidence 333445588885 53 33566776665554
No 444
>PLN02724 Molybdenum cofactor sulfurase
Probab=96.17 E-value=1.1 Score=55.98 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=48.3
Q ss_pred CcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhc--------CCcEEEeecccCcccCCccchhcccCCCCcEEEec-
Q 003466 618 GCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNR--------KIPVIFDEVFTGFWRLGVETTADLLGCVPDIACYG- 688 (818)
Q Consensus 618 ~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~--------gilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg- 688 (818)
.++..|.+--+ ....|.+.| ++.+.++++.. ++++++|=+|+ +|.. -.+.-.+.+|++++|
T Consensus 191 ~~t~LVa~~~v-sN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g~~----piDv~~~~~Dfl~~S~ 260 (805)
T PLN02724 191 EAYNLFAFPSE-CNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CGTS----PPDLSRYPADFVVVSF 260 (805)
T ss_pred CCcceEEEEcc-ccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cCCC----CCChhhcCCCEEEEec
Confidence 34456777666 788899886 55555545432 36899998884 3321 112223457988665
Q ss_pred -ccccCCccccceeecchHHHh
Q 003466 689 -KLLTGGVIPLAATLATNAVFD 709 (818)
Q Consensus 689 -KgLggGy~PlsAvl~~~~i~~ 709 (818)
|-+||= .-+|++.++++..+
T Consensus 261 HK~~GgP-~G~G~L~vr~~~~~ 281 (805)
T PLN02724 261 YKIFGYP-TGLGALLVRRDAAK 281 (805)
T ss_pred ceeccCC-CCceEEEEehhhhh
Confidence 655521 11577777877654
No 445
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=96.11 E-value=0.14 Score=58.65 Aligned_cols=79 Identities=14% Similarity=0.092 Sum_probs=43.6
Q ss_pred CCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeec----ccCcccCCccchhcccCCCCcEEE-ecccc
Q 003466 617 SGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEV----FTGFWRLGVETTADLLGCVPDIAC-YGKLL 691 (818)
Q Consensus 617 ~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV----~TGfGRtG~~~a~e~~gv~PDivt-lgKgL 691 (818)
.+++|+|+++-- +.-|.+.. ++++.++++++|+++|+ =+ .+++-+-|.+++ ||++ .+|.+
T Consensus 195 ~~~~a~v~vq~P--n~~G~~ed----~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GA--------DI~vg~~Q~f 259 (429)
T PF02347_consen 195 DDDTAAVMVQNP--NTFGVFED----IKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGA--------DIVVGEHQTF 259 (429)
T ss_dssp STTEEEEEEESS---TTSB--T----HHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT---------SEEEECCTTT
T ss_pred ccCeEEEEeecC--CCCceEee----HHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCc--------cEEeeCCCCC
Confidence 368999999863 44566553 99999999999999997 22 334444454443 6663 34444
Q ss_pred c----CCccccce-eecchHHHhhc
Q 003466 692 T----GGVIPLAA-TLATNAVFDSF 711 (818)
Q Consensus 692 g----gGy~PlsA-vl~~~~i~~~l 711 (818)
| +| =|-++ +.+++++...+
T Consensus 260 g~p~~~G-GP~~G~~a~~~~l~r~l 283 (429)
T PF02347_consen 260 GIPMGFG-GPGAGFFAVREDLVRQL 283 (429)
T ss_dssp T---CCC--S--EEEEE-GGGGGGS
T ss_pred cccCCCC-CCCeeeEEEhhhhhhhC
Confidence 4 44 25555 44566655543
No 446
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=96.07 E-value=0.083 Score=57.84 Aligned_cols=37 Identities=11% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.|+.|-|. --.||||||++.-|..+|. ++|+||..+=
T Consensus 3 ~~~~iai~-~KGGvGKTt~~~nLa~~la-----~~g~kVLliD 39 (295)
T PRK13234 3 KLRQIAFY-GKGGIGKSTTSQNTLAALV-----EMGQKILIVG 39 (295)
T ss_pred cceEEEEE-CCCCccHHHHHHHHHHHHH-----HCCCeEEEEe
Confidence 46777776 6789999999999999994 8899998874
No 447
>PF00142 Fer4_NifH: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; InterPro: IPR000392 This entry represents members of the NifH/BchL/ChlL family. Nitrogen fixing bacteria possess a nitrogenase enzyme complex that catalyses the reduction of molecular nitrogen to ammonia [, , ]. The nitrogenase enzyme complex consists of two components: Component I is nitrogenase MoFe protein or dinitrogenase, which contains 2 molecules each of 2 non-identical subunits. Component II is nitrogenase Fe protein or dinitrogenase reductase, which is a homodimer. The monomer is encoded by the nifH gene []. Component II has 2 ATP-binding domains and one 4Fe-4S cluster per homodimer: it supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component I for the reduction of molecular nitrogen to ammonia []. There are a number of conserved regions in the sequence of these proteins: in the N-terminal section there is an ATP-binding site motif 'A' (P-loop) IPR001687 from INTERPRO and in the central section there are two conserved cysteines which have been shown, in nifH, to be the ligands of the 4Fe-4S cluster. Protochlorophyllide reductase is involved in light-independent chlorophyll biosynthesis. The light-independent reaction uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This enzyme complex is composed of three subunits: ChlL, ChlN and ChlB. ChlL is present as a homodimer, and binds one 4Fe-4S cluster per dimer. The conserved domains, including the ATP-binding motif and the Fe-S binding motif found in the three subunits, are similar to those in nitrogenases []. ; GO: 0005524 ATP binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1CP2_A 2AFI_F 1N2C_F 1FP6_C 2AFK_G 1M34_M 1XD8_A 1NIP_A 1M1Y_N 1G21_H ....
Probab=96.06 E-value=0.08 Score=56.54 Aligned_cols=93 Identities=11% Similarity=0.170 Sum_probs=56.2
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChH---HHHHHHHHHHHhCC-CcEEEEEEccCC-CCCH
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGI---SGTISAYESLKLRG-YDVVAVVFEDHG-LVNE 294 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i---~~~~~~~~~l~~~~-~~v~gvi~N~~~-~~~~ 294 (818)
++|+|+-.-.|-+-++ ...+-+-+..--.|++|+++...++ |..+.++..+..++ .++.|+|.|+-. .+..
T Consensus 116 ~~D~v~yDVLGDVVCG----GFamPir~g~a~evyIVtSge~mslyAANNI~~~i~~~~~~g~~~l~GiI~N~r~~~~e~ 191 (273)
T PF00142_consen 116 DYDFVLYDVLGDVVCG----GFAMPIREGYAQEVYIVTSGEFMSLYAANNICKAIKNFADRGGARLGGIICNSRNVDDEE 191 (273)
T ss_dssp TSSEEEEEEESSSSCT----TTTHHHHTTS-SEEEEEEBSSHHHHHHHHHHHHHHHHHCTTSS-EEEEEEEE-SSSTTHH
T ss_pred CCceEEEEEEeeeEEe----eeehhhhhccCCEEEEEecCcHHHHHHHHHHHHHHHHHhccCCCceEEEEecCCCCCCch
Confidence 4789887765533322 2345555555557899999886665 55555666665444 689999999653 3444
Q ss_pred HHHHHhhcC-CCCEEe-cCCCCCC
Q 003466 295 VPLMSYLRN-RVPVLV-LPPLPQD 316 (818)
Q Consensus 295 ~~l~~~~~~-~~pvlg-iP~~~~~ 316 (818)
+.++++.++ +.|+++ ||+.+..
T Consensus 192 ~~v~~fa~~~g~~i~~~iPr~~~v 215 (273)
T PF00142_consen 192 EIVEDFAERIGTPIIAFIPRSEIV 215 (273)
T ss_dssp HHHHHHHHHHTSEEEEEE---HHH
T ss_pred HHHHHHHHHcCCcEEEecCchHHH
Confidence 444444444 999999 9987653
No 448
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=95.91 E-value=0.54 Score=58.79 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=38.3
Q ss_pred HHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLY 802 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~ 802 (818)
+.++.+++.++||+++.. ++.++++..-..|++||+.+++.|.
T Consensus 383 ~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 383 SSELLKAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 567889999999998864 4789999999999999999999995
No 449
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=95.89 E-value=0.078 Score=60.30 Aligned_cols=67 Identities=13% Similarity=0.091 Sum_probs=47.5
Q ss_pred CCCchhHHHHHHHHhccCCCCCC---CCCC-CCCCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 7 HHYPDHHRRILLRLFHHSTFHPQ---PLDL-PLSHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.-|.+++-+.+...+......+. +... -..++.|.|++.-.||||||+|..|..+|. ++|++|...=
T Consensus 70 r~yt~~di~~l~~~~~~~~~~~~~~~~~r~~g~~~~vI~v~n~KGGvGKTT~a~nLA~~La-----~~G~rVLlID 140 (387)
T TIGR03453 70 RSYTLEQINELRRHLAQRGREARRYLPHRRGGEHLQVIAVTNFKGGSGKTTTAAHLAQYLA-----LRGYRVLAID 140 (387)
T ss_pred eeeCHHHHHHHHHHHHhccccccccCCCcCCCCCceEEEEEccCCCcCHHHHHHHHHHHHH-----hcCCCEEEEe
Confidence 45888887777666654211110 1111 144678999999999999999999999994 7799987764
No 450
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.77 E-value=0.13 Score=57.10 Aligned_cols=116 Identities=14% Similarity=0.060 Sum_probs=62.1
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhCCCC-EEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCC-----CC
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPFRLP-GILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGL-----VN 293 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l~~p-vilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~-----~~ 293 (818)
.+|++||.++|=.----.-..-+.++++.++-. ||+|.|...|-- ..+..-.-.+-+.|.+||+.+.+. ..
T Consensus 183 ~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQa---ae~Qa~aFk~~vdvg~vIlTKlDGhakGGgA 259 (483)
T KOG0780|consen 183 NFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQA---AEAQARAFKETVDVGAVILTKLDGHAKGGGA 259 (483)
T ss_pred CCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHh---HHHHHHHHHHhhccceEEEEecccCCCCCce
Confidence 499999999883221111113457788888743 899999776632 221111112458899999999721 11
Q ss_pred HHHHHHhhcCCCCEEecC---CCCCCCcchhhhhhhhh--hhhHHHHHHHHHH
Q 003466 294 EVPLMSYLRNRVPVLVLP---PLPQDSSNDLMEWFDES--HNVFDSLKNIMLL 341 (818)
Q Consensus 294 ~~~l~~~~~~~~pvlgiP---~~~~~~~~~~~~~l~~~--~~~l~~l~~~l~~ 341 (818)
... .+.+ +.||+.|- ..+++..=+-..+.... .+.|+++.+.+..
T Consensus 260 lSa-VaaT--ksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glvek~~e 309 (483)
T KOG0780|consen 260 LSA-VAAT--KSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVEKVQE 309 (483)
T ss_pred eee-hhhh--CCCEEEEecCccccccCCCChHHHHHHHhccccHHHHHHHHHH
Confidence 111 2233 77876542 34444322333333222 1446666655544
No 451
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=95.76 E-value=0.2 Score=56.94 Aligned_cols=171 Identities=13% Similarity=0.086 Sum_probs=86.7
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-CcccCCccchhcccCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GFWRLGVETTADLLGC 680 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-GfGRtG~~~a~e~~gv 680 (818)
+.+++.+++ .+...||+-+- ..+-+.. +++++++|++.|++|++|=.|+ |+ --|..+. .-+..
T Consensus 159 d~l~~~a~~-------~kPklIi~G~S------~y~~~~d-~~~~reIad~vga~l~~D~sH~~GL-Ia~g~~~-~P~~~ 222 (399)
T PF00464_consen 159 DELEKLAKE-------HKPKLIICGAS------SYPRPID-FKRFREIADEVGAYLMADISHIAGL-IAGGLFP-NPFPY 222 (399)
T ss_dssp HHHHHHHHH-------H--SEEEEE-S------STSS----HHHHHHHHHHTT-EEEEE-TTTHHH-HHTTSS---GCCT
T ss_pred HHHHHHHhh-------cCCCEEEECch------hccCccC-HHHHHHHHHhcCcEEEecccccccc-eehheec-Ccccc
Confidence 556666653 24456676653 1222333 6999999999999999999886 44 2222222 22332
Q ss_pred CCcEE--EecccccCCccccce-eecc--------------hHHHhhccC----C----hH-------------------
Q 003466 681 VPDIA--CYGKLLTGGVIPLAA-TLAT--------------NAVFDSFVG----D----SK------------------- 716 (818)
Q Consensus 681 ~PDiv--tlgKgLggGy~PlsA-vl~~--------------~~i~~~l~~----~----~~------------------- 716 (818)
.|++ +.-|.|.| |-|+ ++++ +++.+.+.. . .+
T Consensus 223 -ADvvt~sThKtl~G---PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~f 298 (399)
T PF00464_consen 223 -ADVVTGSTHKTLRG---PRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEF 298 (399)
T ss_dssp -SSEEEEESSGGG-S---SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHH
T ss_pred -ceEEEeeccccccc---cCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHH
Confidence 6888 46689987 3344 5556 455554321 1 11
Q ss_pred -HH-------HHHHHHHHHcCCCeeEEEeee---eEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec--------
Q 003466 717 -LW-------DLELIQQISSHRTVQRVVALG---TLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL-------- 777 (818)
Q Consensus 717 -~~-------~~~l~~~l~~~~~v~~vrg~G---l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~-------- 777 (818)
.+ .+.|.+.|.+.+. .|-+.| .++-+++.... ..+....+.|.+.||++...
T Consensus 299 k~Ya~qVv~NAk~La~~L~~~G~--~v~~ggTd~H~vlvd~~~~~-------~~g~~a~~~Le~~gI~vnkn~iP~d~~~ 369 (399)
T PF00464_consen 299 KEYAKQVVKNAKALAEALQERGF--KVVTGGTDNHQVLVDLRSFG-------IDGKEAEKALEEAGIIVNKNTIPGDRSP 369 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EEGGGS-SSSEEEEEGGGGT-------S-HHHHHHHHHHTTEE-EEE--TTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHhhCCc--EEEECCCCCCeEEEEecccc-------cchHHHHHHHHhcCeeecccccCCCCCC
Confidence 00 0123344554443 111112 24444543321 13556677888999999741
Q ss_pred --CCEEEEECCCC----ChHHHHHHHHHHH
Q 003466 778 --GNVIYLMCGPC----SSPEVCSQLLLKL 801 (818)
Q Consensus 778 --g~~ir~~ppl~----~t~edId~~~~~l 801 (818)
...||+-.+.. +.++|++++.+.|
T Consensus 370 ~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 370 FVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp TT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred CCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 25788877653 4577777776543
No 452
>PF07755 DUF1611: Protein of unknown function (DUF1611); InterPro: IPR011669 This entry contains a number of hypothetical bacterial and archaeal proteins. The region is approximately 350 residues long. A member of this family (Q6M063 from SWISSPROT) is thought to associate with another subunit to form an H+-transporting ATPase, but no evidence has been found to support this.; PDB: 2G0T_A 2OBN_A.
Probab=95.75 E-value=0.022 Score=62.09 Aligned_cols=38 Identities=8% Similarity=0.094 Sum_probs=32.0
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..+.+.+.||+..+||-|.++.|.++|+ ++|+++.+.=
T Consensus 111 ~~~rv~~vGTDcavGK~tTal~L~~~l~-----~~G~~a~fva 148 (301)
T PF07755_consen 111 KAKRVLTVGTDCAVGKMTTALELRRALR-----ERGINAGFVA 148 (301)
T ss_dssp SSEEEEEEESSSSSSHHHHHHHHHHHHH-----HTT--EEEEE
T ss_pred CCCEEEEEccCccccHHHHHHHHHHHHH-----HcCCCceEEe
Confidence 3578999999999999999999999994 8999987754
No 453
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=95.62 E-value=0.11 Score=60.24 Aligned_cols=210 Identities=14% Similarity=-0.002 Sum_probs=107.3
Q ss_pred CHHHHHHHHHhhhhc-ccccCCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccccccccc
Q 003466 418 QIELARDMGYTAARF-GHVMFPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFL 496 (818)
Q Consensus 418 hp~V~eAi~~q~~~~-~~~~~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~ 496 (818)
++...+++...+++- +.....-...+...++...|.++++.+.-..-.|+++|||||..|+.+|+..|..+.+..
T Consensus 75 ~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~---- 150 (460)
T COG0076 75 PPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAE---- 150 (460)
T ss_pred HHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc----
Confidence 445555555555442 211111123444555556666666543223468999999999999999943332221100
Q ss_pred CCCccccccceEEEEEcCCCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccc
Q 003466 497 GKDTTEKCIELKVLALKGSYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHK 576 (818)
Q Consensus 497 ~~~~~~~~~r~~II~~~~sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~ 576 (818)
....+....|.+....|-+..-++.+-|.....-+ -.|.
T Consensus 151 ----~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~---------------------------~~~~---------- 189 (460)
T COG0076 151 ----SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVP---------------------------TVPT---------- 189 (460)
T ss_pred ----ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEE---------------------------eccC----------
Confidence 00011122566777788766555555443311110 0010
Q ss_pred cccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEE--EEEEccccccCCCcccCCHHHHHHHHHHHHhcC
Q 003466 577 DITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIG--ALIIEPVVHAAGGMHMVDPLFQRILVKECQNRK 654 (818)
Q Consensus 577 ~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iA--AVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~g 654 (818)
+..+ | .+.+++.+.+. ++. .|-+=+ ...-|.+-+ +++|.++|+++|
T Consensus 190 ---~~~i--------d--------~~~l~~~i~~~-------t~~g~vV~~aG--tT~~G~iDd----i~~ia~ia~~~~ 237 (460)
T COG0076 190 ---DYRI--------D--------VDALEEAIDEN-------TIGGVVVGTAG--TTDTGSIDD----IEELADIAEEYG 237 (460)
T ss_pred ---cccc--------C--------HHHHHHHHHhh-------ccCceEEEEec--CCCCCccCC----HHHHHHHHHHcC
Confidence 0000 0 25677777642 222 222223 234455554 999999999999
Q ss_pred CcEEEeecccCcccCCccch--hc-ccCC-CCcEEEec-ccccCCccccceeecchH
Q 003466 655 IPVIFDEVFTGFWRLGVETT--AD-LLGC-VPDIACYG-KLLTGGVIPLAATLATNA 706 (818)
Q Consensus 655 ilLI~DEV~TGfGRtG~~~a--~e-~~gv-~PDivtlg-KgLggGy~PlsAvl~~~~ 706 (818)
+.+.+|=+..||=. .+.- .. .+++ ..|-+++. --.|.-.+|.|+++.+++
T Consensus 238 i~lHVDAA~GG~~~--pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~ 292 (460)
T COG0076 238 IWLHVDAAFGGFLL--PFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDE 292 (460)
T ss_pred CcEEEEccccceee--cccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECH
Confidence 99999999987622 1100 01 1233 23444433 122333356666777765
No 454
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=95.59 E-value=0.065 Score=61.36 Aligned_cols=66 Identities=14% Similarity=0.052 Sum_probs=46.7
Q ss_pred CCchhHHHHHHHHhccCCCCCCC-----CCCC-CCCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 8 HYPDHHRRILLRLFHHSTFHPQP-----LDLP-LSHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
-|-.++-+.+.+++..+.....+ -.-+ ..|+.|-|+..-.||||||+|.-|..+|. ++|++|...=
T Consensus 86 ~yt~~di~~lr~~l~~~~~~~~~~~~~~~r~~~~~~~vIav~n~KGGvGKTTta~nLA~~LA-----~~G~rVLlID 157 (405)
T PRK13869 86 FYTLGQINEIRQMLAGSTRGRESIDFVPHRRGSEHLQVIAVTNFKGGSGKTTTSAHLAQYLA-----LQGYRVLAVD 157 (405)
T ss_pred eecHHHHHHHHHHHHhhccccccccccCCCCCCCCceEEEEEcCCCCCCHHHHHHHHHHHHH-----hcCCceEEEc
Confidence 46667767777777652111111 1111 34788999999999999999999999994 7899987654
No 455
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=95.58 E-value=0.16 Score=58.10 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=27.6
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
+.++|+|. +|+||||+++-|+..+. . ++|.+|..+-
T Consensus 224 ~vi~lvGp-tGvGKTTtaaKLA~~~~---~-~~G~~V~Lit 259 (432)
T PRK12724 224 KVVFFVGP-TGSGKTTSIAKLAAKYF---L-HMGKSVSLYT 259 (432)
T ss_pred eEEEEECC-CCCCHHHHHHHHHHHHH---H-hcCCeEEEec
Confidence 35788885 89999999999997552 1 6688777654
No 456
>PRK13768 GTPase; Provisional
Probab=95.56 E-value=0.075 Score=56.91 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=32.6
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
||..++|+|. .|+||||++..+..++. ++|.+|..+.
T Consensus 1 ~~~~i~v~G~-~G~GKTt~~~~~~~~l~-----~~g~~v~~i~ 37 (253)
T PRK13768 1 MMYIVFFLGT-AGSGKTTLTKALSDWLE-----EQGYDVAIVN 37 (253)
T ss_pred CcEEEEEECC-CCccHHHHHHHHHHHHH-----hcCCceEEEE
Confidence 5678899999 99999999999999994 7899988876
No 457
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=95.54 E-value=0.083 Score=56.26 Aligned_cols=51 Identities=22% Similarity=0.294 Sum_probs=36.9
Q ss_pred hHHHHHHHHhccCCCCCCCCCCCCCCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 12 HHRRILLRLFHHSTFHPQPLDLPLSHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..+.++.++++++.. ...|=|||+ .|+||||+.-.|.+.|+ ++|++|+..-
T Consensus 14 ~~~~ll~~l~~~~g~----------a~~iGiTG~-PGaGKSTli~~l~~~~~-----~~g~~VaVlA 64 (266)
T PF03308_consen 14 EARELLKRLYPHTGR----------AHVIGITGP-PGAGKSTLIDALIRELR-----ERGKRVAVLA 64 (266)
T ss_dssp HHHHHHHHHGGGTT-----------SEEEEEEE--TTSSHHHHHHHHHHHHH-----HTT--EEEEE
T ss_pred HHHHHHHHHHhhcCC----------ceEEEeeCC-CCCcHHHHHHHHHHHHh-----hcCCceEEEE
Confidence 556677777766422 236888998 89999999999999995 7799988765
No 458
>PRK09435 membrane ATPase/protein kinase; Provisional
Probab=95.54 E-value=0.52 Score=52.53 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=30.2
Q ss_pred eEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 39 TFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 39 ~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.+-|+|. .|+||||++..|...|. ++|.+|+.+.
T Consensus 58 ~igi~G~-~GaGKSTl~~~l~~~l~-----~~g~~v~vi~ 91 (332)
T PRK09435 58 RIGITGV-PGVGKSTFIEALGMHLI-----EQGHKVAVLA 91 (332)
T ss_pred EEEEECC-CCCCHHHHHHHHHHHHH-----HCCCeEEEEE
Confidence 6888888 99999999999999994 6788988877
No 459
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=95.40 E-value=0.18 Score=51.97 Aligned_cols=91 Identities=15% Similarity=0.130 Sum_probs=48.2
Q ss_pred CCCEEEEeCCCCCCCcCCCC--CchhhHhhhC-CCCEEEEEcCCCChHHHHHHHHHHHHhCCCcEEEEEEccCCC-CCHH
Q 003466 220 MEILCIVETAGGVASPGPSG--SLQCDLYRPF-RLPGILVGDGRLGGISGTISAYESLKLRGYDVVAVVFEDHGL-VNEV 295 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~--~~~~dla~~l-~~pvilV~~~~~g~i~~~~~~~~~l~~~~~~v~gvi~N~~~~-~~~~ 295 (818)
++|+|+|-++| .+|.+.. .-.-.+.+.. ...++||.+...+.- ..-...... +...+.|+|+-+.++ ...-
T Consensus 83 ~~D~vlIDT~G--r~~~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~-~~~~~~~~~--~~~~~~~lIlTKlDet~~~G 157 (196)
T PF00448_consen 83 GYDLVLIDTAG--RSPRDEELLEELKKLLEALNPDEVHLVLSATMGQE-DLEQALAFY--EAFGIDGLILTKLDETARLG 157 (196)
T ss_dssp TSSEEEEEE-S--SSSTHHHHHHHHHHHHHHHSSSEEEEEEEGGGGGH-HHHHHHHHH--HHSSTCEEEEESTTSSSTTH
T ss_pred CCCEEEEecCC--cchhhHHHHHHHHHHhhhcCCccceEEEecccChH-HHHHHHHHh--hcccCceEEEEeecCCCCcc
Confidence 48999999998 3343211 1112233333 556999999776542 222222222 224577999999943 2333
Q ss_pred HHHHhhcC-CCCEEecCCCCC
Q 003466 296 PLMSYLRN-RVPVLVLPPLPQ 315 (818)
Q Consensus 296 ~l~~~~~~-~~pvlgiP~~~~ 315 (818)
.+-+.... ++|+--|-.-+.
T Consensus 158 ~~l~~~~~~~~Pi~~it~Gq~ 178 (196)
T PF00448_consen 158 ALLSLAYESGLPISYITTGQR 178 (196)
T ss_dssp HHHHHHHHHTSEEEEEESSSS
T ss_pred cceeHHHHhCCCeEEEECCCC
Confidence 33332222 888866544333
No 460
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=95.31 E-value=2.4 Score=48.02 Aligned_cols=47 Identities=15% Similarity=0.185 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhCCceEeec-CCEEEEECCCCChHHHHHHHHHHHHHH
Q 003466 758 LYAASLLKKLREDGVYMRPL-GNVIYLMCGPCSSPEVCSQLLLKLYQR 804 (818)
Q Consensus 758 ~~a~~~~~~l~e~Gvlv~p~-g~~ir~~ppl~~t~edId~~~~~l~~~ 804 (818)
..+..+..+....|+.++.. ...+-++..=++|++||+.+++++...
T Consensus 400 ~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 400 EVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 34666778888889999874 357778888899999999999988754
No 461
>cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes. PRK catalyzes the phosphorylation of D-ribulose 5-phosphate to form D-ribulose 1, 5-biphosphate, using ATP and NADPH produced by the primary reactions of photosynthesis.
Probab=95.24 E-value=0.079 Score=56.91 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=27.8
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 40 FQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 40 ~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|-|+| +||+||||++..|.+.| + +.|.++..+.
T Consensus 2 IgItG-~SGSGKTTv~~~l~~~l----~-~~g~~v~vI~ 34 (277)
T cd02029 2 IAVTG-SSGAGTTTVKRAFEHIF----A-REGIHPAVVE 34 (277)
T ss_pred EEEEC-CCCCCHHHHHHHHHHHH----H-hcCCceEEEe
Confidence 56778 69999999999999999 3 6788887766
No 462
>PLN02452 phosphoserine transaminase
Probab=95.19 E-value=1.7 Score=49.25 Aligned_cols=136 Identities=10% Similarity=-0.057 Sum_probs=82.3
Q ss_pred CcEEEeecccCcccCCccchhcccCCCCcEEEecccccCCccc-cceeecchHHHhhccCChH-----------------
Q 003466 655 IPVIFDEVFTGFWRLGVETTADLLGCVPDIACYGKLLTGGVIP-LAATLATNAVFDSFVGDSK----------------- 716 (818)
Q Consensus 655 ilLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgKgLggGy~P-lsAvl~~~~i~~~l~~~~~----------------- 716 (818)
+++|+|=+++-. +.-.-.+.+|+ |+..-=|.+| -| ++.+++++++.+.......
T Consensus 171 ~~lvVDa~Ss~g---~~pidv~~~~v--~~~saqK~lG---P~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~T 242 (365)
T PLN02452 171 VPLVADMSSNFL---SKPVDVSKYGV--IYAGAQKNVG---PSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNT 242 (365)
T ss_pred CeEEEECCcccc---CcccCHHHcCE--EEEecccccC---CCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCC
Confidence 899999888532 22344556676 7777778884 23 7788889888765432110
Q ss_pred --------------HHH----------------HHHHHHHHcCCCe-eE-EE---eeeeEEEEEEecCcccCCCchHHHH
Q 003466 717 --------------LWD----------------LELIQQISSHRTV-QR-VV---ALGTLCAIELQAAGCNAGYGSLYAA 761 (818)
Q Consensus 717 --------------~~~----------------~~l~~~l~~~~~v-~~-vr---g~Gl~~~iel~~~~~~~~~~~~~a~ 761 (818)
.+. +.+.+.+++.+.+ .. +. .....+.+.+... ....
T Consensus 243 P~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~--------~~~~ 314 (365)
T PLN02452 243 PPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS--------ELEA 314 (365)
T ss_pred hhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc--------hhHH
Confidence 011 1122333333322 11 10 1233444444322 3567
Q ss_pred HHHHHHHhCCceEeecC---CEEEEECCCCChHHHHHHHHHHHHHHHH
Q 003466 762 SLLKKLREDGVYMRPLG---NVIYLMCGPCSSPEVCSQLLLKLYQRLE 806 (818)
Q Consensus 762 ~~~~~l~e~Gvlv~p~g---~~ir~~ppl~~t~edId~~~~~l~~~l~ 806 (818)
.|.+.+.++|++..++. ..+|+..=-.++.++++.+++.+++.-+
T Consensus 315 ~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 315 EFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred HHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 89999999999997632 2378877667999999999988877643
No 463
>PRK15453 phosphoribulokinase; Provisional
Probab=95.12 E-value=0.16 Score=54.93 Aligned_cols=37 Identities=19% Similarity=0.329 Sum_probs=27.8
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.++.|-|+|+ ||+||||++.+|...| + +.+.++.+..
T Consensus 4 k~piI~ItG~-SGsGKTTva~~l~~if----~-~~~~~~~vi~ 40 (290)
T PRK15453 4 KHPIIAVTGS-SGAGTTTVKRAFEKIF----R-RENINAAVVE 40 (290)
T ss_pred CCcEEEEECC-CCCCHHHHHHHHHHHH----h-hcCCCeEEEe
Confidence 3456788886 9999999999999999 3 5565544443
No 464
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=95.08 E-value=1.4 Score=48.73 Aligned_cols=58 Identities=10% Similarity=0.130 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecc
Q 003466 601 SSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVF 663 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~ 663 (818)
.+.|++.|++ .+.++|+-|+.-=. .+..|-.+.+-.-+++++++|++|||++++|-.-
T Consensus 171 ~~kLe~lide----vG~~nvp~I~~tiT-~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~R 228 (471)
T COG3033 171 LEKLERLIDE----VGADNVPYIVLTIT-NNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAAR 228 (471)
T ss_pred HHHHHHHHHH----hCcccCcEEEEEEe-ccccCCCcchHHhHHHHHHHHHHcCCcEEeehhh
Confidence 3778888886 56677765554433 3344556668899999999999999999999543
No 465
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=95.02 E-value=0.083 Score=53.28 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=32.1
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
+++.+-|+|. +|+||||+...|++.| + .+|.+|+..|
T Consensus 5 ~~~ii~ivG~-sgsGKTTLi~~li~~l----~-~~g~~vg~Ik 41 (173)
T PRK10751 5 MIPLLAIAAW-SGTGKTTLLKKLIPAL----C-ARGIRPGLIK 41 (173)
T ss_pred CceEEEEECC-CCChHHHHHHHHHHHH----h-hcCCeEEEEE
Confidence 3556778875 9999999999999999 4 7799999999
No 466
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=94.84 E-value=0.029 Score=59.44 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=34.2
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
||.|.|+|+-.||||||+|+.|..+|. +.|++|...-
T Consensus 1 M~~iai~s~kGGvG~TTltAnLA~aL~-----~~G~~VlaID 37 (243)
T PF06564_consen 1 MKVIAIVSPKGGVGKTTLTANLAWALA-----RLGESVLAID 37 (243)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHH-----HCCCcEEEEe
Confidence 889999999999999999999999994 8899988765
No 467
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=94.82 E-value=0.033 Score=54.23 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=31.6
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceecc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQT 82 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~ 82 (818)
|.++|+|. +|+||||++..|++.|. ++|.+|+++|=...
T Consensus 1 pvv~VvG~-~~sGKTTl~~~Li~~l~-----~~g~~v~~ik~~~~ 39 (140)
T PF03205_consen 1 PVVQVVGP-KNSGKTTLIRKLINELK-----RRGYRVAVIKHTDH 39 (140)
T ss_dssp -EEEEEES-TTSSHHHHHHHHHHHHH-----HTT--EEEEEE-ST
T ss_pred CEEEEECC-CCCCHHHHHHHHHHHHh-----HcCCceEEEEEccC
Confidence 47899997 79999999999999994 89999999996544
No 468
>COG1348 NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism]
Probab=94.72 E-value=1.8 Score=45.43 Aligned_cols=88 Identities=11% Similarity=0.131 Sum_probs=56.3
Q ss_pred CCEEEEeCC-----CCCCCcCCCCCchhhHhhhCCCCEEEEEcCCCChHHHH---HHHHHHHHh-CCCcEEEEEEccCCC
Q 003466 221 EILCIVETA-----GGVASPGPSGSLQCDLYRPFRLPGILVGDGRLGGISGT---ISAYESLKL-RGYDVVAVVFEDHGL 291 (818)
Q Consensus 221 ~d~vivEGa-----gg~~~p~~~~~~~~dla~~l~~pvilV~~~~~g~i~~~---~~~~~~l~~-~~~~v~gvi~N~~~~ 291 (818)
-|+|+-.=- ||.+.|+.++.. -.+.+|+++.-.++-++ .-++.-+.. .++++.|+|.|.-..
T Consensus 118 ~DvviyDVLGDVVCGGFAmPiReg~A---------deiyIVtSge~MalYAANNI~kgi~k~a~~~~~rLgGiIcNsr~~ 188 (278)
T COG1348 118 LDVVIYDVLGDVVCGGFAMPIREGYA---------DEIYIVTSGEMMALYAANNIAKGIRKYAKTGGVRLGGIICNSRSV 188 (278)
T ss_pred CCEEEEeccCceeecceeeehhcccC---------cEEEEEecCchHHHHHHHHHHHHHHHHhhcCCcceeeEEecCCCc
Confidence 377765433 677778765543 24678888876665444 334433333 568899999998754
Q ss_pred CC-HHHHHHhhcC-CCCEEe-cCCCCCCC
Q 003466 292 VN-EVPLMSYLRN-RVPVLV-LPPLPQDS 317 (818)
Q Consensus 292 ~~-~~~l~~~~~~-~~pvlg-iP~~~~~~ 317 (818)
+. .+.++++.++ +.|+++ ||+.+..+
T Consensus 189 ~~e~e~v~~fa~~igt~li~~vPr~~ivq 217 (278)
T COG1348 189 DRERELVEAFAERLGTQLIHFVPRDNIVQ 217 (278)
T ss_pred ccHHHHHHHHHHHhCCceEeeccchHHHH
Confidence 43 3344444444 999999 99987654
No 469
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=94.70 E-value=1 Score=50.58 Aligned_cols=187 Identities=13% Similarity=0.112 Sum_probs=104.0
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHH-HHhcCCcEEEeecccCcccCCcc--------
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKE-CQNRKIPVIFDEVFTGFWRLGVE-------- 672 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreL-c~~~gilLI~DEV~TGfGRtG~~-------- 672 (818)
+.+|+++.+ ...|.+|.+=|.+++-.|+.. +.+-.++|..+ +...+.-++-|.+++----++..
T Consensus 161 D~Ve~LV~~------D~svKGiWcVP~ySNPtG~ty-Sde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~ni 233 (425)
T PF12897_consen 161 DMVEELVAE------DPSVKGIWCVPKYSNPTGITY-SDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNI 233 (425)
T ss_dssp HHHHHHTHT------STTEEEEEE-SSS-TTT------HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------H
T ss_pred HHHHHHHhc------CCccceEEeCCCccCCCCccC-CHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHH
Confidence 567777652 568999999999766677655 88999999988 45789999999998521111211
Q ss_pred -chhcccCCCCcEE----EecccccCCccccceeecchHHHhhccCChH-------------------------------
Q 003466 673 -TTADLLGCVPDIA----CYGKLLTGGVIPLAATLATNAVFDSFVGDSK------------------------------- 716 (818)
Q Consensus 673 -~a~e~~gv~PDiv----tlgKgLggGy~PlsAvl~~~~i~~~l~~~~~------------------------------- 716 (818)
-.++..| .||.+ ..||--=.| .=+|++.++++-++++.....
T Consensus 234 l~~~~~AG-npdrv~~F~STSKITf~G-aGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~k 311 (425)
T PF12897_consen 234 LDACAKAG-NPDRVYVFASTSKITFPG-AGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRK 311 (425)
T ss_dssp HHHHHHTT--TTSEEEEEESTTTS-TT-SS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHH
T ss_pred HHHHHHcC-CCCeEEEEecccccccCC-cceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHH
Confidence 1112222 47754 577844222 237889998877766543211
Q ss_pred ---HHH-------HHHHHHHH-cCCCe-eEEEeeeeEEEEEEecCcccCCCchHHHHHHHHHHHhCCceEeec-------
Q 003466 717 ---LWD-------LELIQQIS-SHRTV-QRVVALGTLCAIELQAAGCNAGYGSLYAASLLKKLREDGVYMRPL------- 777 (818)
Q Consensus 717 ---~~~-------~~l~~~l~-~~~~v-~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gvlv~p~------- 777 (818)
+++ +.+.+.|. ..+.. ...-.-|.++.++..+. .|.++.+.|.|.||.+.+.
T Consensus 312 Ha~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G---------~AkrvV~lakeAGV~LT~AGAtfPyg 382 (425)
T PF12897_consen 312 HAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG---------TAKRVVELAKEAGVALTPAGATFPYG 382 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT----------HHHHHHHHHHTTEE---TTTTSGGG
T ss_pred HHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC---------hHHHHHHHHHHhCceeCCCCCCCCCC
Confidence 000 11222333 22332 22234577888887654 4888999999999999862
Q ss_pred ----CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 778 ----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 778 ----g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
...||+.|++ -+.+|++.+.+.+--+++-
T Consensus 383 ~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 383 KDPRDSNIRIAPSY-PSLEELETAMDVFATCVKL 415 (425)
T ss_dssp --TTS-EEEE--SS-S-HHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEecCCC-CCHHHHHHHHHHHHHHHHH
Confidence 3689999987 5678999999999777643
No 470
>PRK14491 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA; Provisional
Probab=94.68 E-value=0.14 Score=61.51 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=35.4
Q ss_pred CCCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEce
Q 003466 35 LSHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKP 79 (818)
Q Consensus 35 ~~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KP 79 (818)
.+|+.|-|+|. +|+||||+...|+..| + ++|++|+..|=
T Consensus 8 ~~~~vi~ivG~-s~sGKTTlie~li~~L----~-~~G~rVavIKh 46 (597)
T PRK14491 8 LSIPLLGFCAY-SGTGKTTLLEQLIPEL----N-QRGLRLAVIKH 46 (597)
T ss_pred CCccEEEEEcC-CCCCHHHHHHHHHHHH----H-hCCceEEEEEc
Confidence 35888999997 9999999999999999 4 88999999994
No 471
>COG3367 Uncharacterized conserved protein [Function unknown]
Probab=94.68 E-value=0.17 Score=55.07 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=33.2
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.+.+++.||+.-+||-|.+.-|-++++ .+|+++.+.-
T Consensus 148 a~~V~vvGTd~~vGKrTTa~~L~~~~~-----e~G~~a~fva 184 (339)
T COG3367 148 AKVVLVVGTDCAVGKRTTALELREAAR-----EEGIKAGFVA 184 (339)
T ss_pred CcEEEEeccccccchhHHHHHHHHHHH-----HhCCccceEe
Confidence 468999999999999999999999994 8899988765
No 472
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=94.52 E-value=0.64 Score=50.35 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=29.4
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.+.+.+.|. +|+|||++...|+..+. .+|.+|++.-
T Consensus 75 ~~~i~~~G~-~g~GKTtl~~~l~~~l~-----~~~~~v~~i~ 110 (270)
T PRK06731 75 VQTIALIGP-TGVGKTTTLAKMAWQFH-----GKKKTVGFIT 110 (270)
T ss_pred CCEEEEECC-CCCcHHHHHHHHHHHHH-----HcCCeEEEEe
Confidence 357888888 99999999999999983 5677777665
No 473
>PRK14723 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=94.48 E-value=0.7 Score=56.62 Aligned_cols=83 Identities=16% Similarity=0.211 Sum_probs=46.2
Q ss_pred CCCEEEEeCCCCCCCcCCCCCchhhHhhhC----CCCEEEEEcCCCCh--HHHHHHHHHHHHhC-CCcEEEEEEccCCC-
Q 003466 220 MEILCIVETAGGVASPGPSGSLQCDLYRPF----RLPGILVGDGRLGG--ISGTISAYESLKLR-GYDVVAVVFEDHGL- 291 (818)
Q Consensus 220 ~~d~vivEGagg~~~p~~~~~~~~dla~~l----~~pvilV~~~~~g~--i~~~~~~~~~l~~~-~~~v~gvi~N~~~~- 291 (818)
.+|+|||.++| .++.+ ...+-++.+.. ...++||.+.-.+. ++.++ +.++.. +.++.|+||.|.++
T Consensus 263 ~~D~VLIDTAG--Rs~~d-~~l~eel~~l~~~~~p~e~~LVLsAt~~~~~l~~i~---~~f~~~~~~~i~glIlTKLDEt 336 (767)
T PRK14723 263 DKHLVLIDTVG--MSQRD-RNVSEQIAMLCGVGRPVRRLLLLNAASHGDTLNEVV---HAYRHGAGEDVDGCIITKLDEA 336 (767)
T ss_pred CCCEEEEeCCC--CCccC-HHHHHHHHHHhccCCCCeEEEEECCCCcHHHHHHHH---HHHhhcccCCCCEEEEeccCCC
Confidence 37999999999 33332 22333333322 23489999866432 33333 333322 34688999999943
Q ss_pred CCHHH---HHHhhcCCCCEEec
Q 003466 292 VNEVP---LMSYLRNRVPVLVL 310 (818)
Q Consensus 292 ~~~~~---l~~~~~~~~pvlgi 310 (818)
...-. +...+ ++|+.-|
T Consensus 337 ~~~G~iL~i~~~~--~lPI~yi 356 (767)
T PRK14723 337 THLGPALDTVIRH--RLPVHYV 356 (767)
T ss_pred CCccHHHHHHHHH--CCCeEEE
Confidence 22222 23333 8887654
No 474
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=94.48 E-value=1.1 Score=50.62 Aligned_cols=198 Identities=15% Similarity=0.066 Sum_probs=110.3
Q ss_pred CHHHHHHHHHhhhhccccc---CCCCCChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhccccccc
Q 003466 418 QIELARDMGYTAARFGHVM---FPENVYEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVD 494 (818)
Q Consensus 418 hp~V~eAi~~q~~~~~~~~---~~~~~~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~ 494 (818)
+|+.++|+.+.+..+...- -.+...+-..++++.++..++ .+.++.+|.-+.|+..++-.. .
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~---aea~~ivnnn~aAVll~~~al-----~------- 104 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTG---AEAAAIVNNNAAAVLLTLNAL-----A------- 104 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccc---hhheeeECCcHHHHHHHHhhh-----c-------
Confidence 7999999998877643221 111122223377777777776 368888899898988877654 1
Q ss_pred ccCCCccccccceEEEEEcC---CCCCCccccccccCCCCCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhh
Q 003466 495 FLGKDTTEKCIELKVLALKG---SYHGDTLGAMEAQAPSPYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSK 571 (818)
Q Consensus 495 ~~~~~~~~~~~r~~II~~~~---sYHG~t~~als~tg~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~ 571 (818)
.++..|+.+=. +||-...+.+.++|....--
T Consensus 105 ---------~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~Ev------------------------------------- 138 (395)
T COG1921 105 ---------EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEV------------------------------------- 138 (395)
T ss_pred ---------cCCeEEEEccccccCCCCChhHHHHHcCCEEEEe-------------------------------------
Confidence 11223333211 45555555555554331100
Q ss_pred ccccccccccCccchhhcccCchhHHHHHHHHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHH
Q 003466 572 IVEHKDITFCSRDEIFYEERDSSDLASIYSSYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQ 651 (818)
Q Consensus 572 ~~~~~~~~~nd~~~~~~~~~~~~~~~~~~~~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~ 651 (818)
++ .|-. .....+.+|.+ +. ....=+..+- .+.-|++. ++.+.++|+
T Consensus 139 ----G~--tn~t----------------~~~d~~~AIne-----~t-a~llkV~s~~-~~f~~~l~-----~~~l~~ia~ 184 (395)
T COG1921 139 ----GT--TNRT----------------HLKDYELAINE-----NT-ALLLKVHSSN-YGFTGMLS-----EEELVEIAH 184 (395)
T ss_pred ----cc--cCcC----------------CHHHHHHHhcc-----CC-eeEEEEeecc-cccccccc-----HHHHHHHHH
Confidence 00 0100 01345566652 22 2222223331 13334444 788999999
Q ss_pred hcCCcEEEeecccCcccCCccch-hcccCCCCcEEEec--ccccCCccccceeecchHHHhhccCC
Q 003466 652 NRKIPVIFDEVFTGFWRLGVETT-ADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSFVGD 714 (818)
Q Consensus 652 ~~gilLI~DEV~TGfGRtG~~~a-~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l~~~ 714 (818)
+||+++|+|..- |. +.-+... .+.+-.-+|+++|| |-|+| ---|-+++++++++.+...
T Consensus 185 ~~~lpvivD~aS-g~-~v~~e~~l~~~la~GaDLV~~SgdKllgG--PqaGii~GkKelI~~lq~~ 246 (395)
T COG1921 185 EKGLPVIVDLAS-GA-LVDKEPDLREALALGADLVSFSGDKLLGG--PQAGIIVGKKELIEKLQSH 246 (395)
T ss_pred HcCCCEEEecCC-cc-ccccccchhHHHhcCCCEEEEecchhcCC--CccceEechHHHHHHHHhh
Confidence 999999999766 43 2212222 22334458999886 67775 1223388999999877654
No 475
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=94.44 E-value=0.29 Score=47.96 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=27.7
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 40 FQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 40 ~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
+.+.|. .|+|||+++..|...+. ++|.++..+.
T Consensus 2 i~~~G~-~GsGKTt~~~~l~~~~~-----~~g~~v~ii~ 34 (148)
T cd03114 2 IGITGV-PGAGKSTLIDALITALR-----ARGKRVAVLA 34 (148)
T ss_pred EEEECC-CCCcHHHHHHHHHHHHH-----HCCCEEEEEE
Confidence 456676 79999999999999994 7788888776
No 476
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=94.44 E-value=1.5 Score=49.80 Aligned_cols=48 Identities=19% Similarity=0.144 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCceEeec-----CCEEEEECCCCChHHHHHHHHHHHHHHHHH
Q 003466 760 AASLLKKLREDGVYMRPL-----GNVIYLMCGPCSSPEVCSQLLLKLYQRLEE 807 (818)
Q Consensus 760 a~~~~~~l~e~Gvlv~p~-----g~~ir~~ppl~~t~edId~~~~~l~~~l~~ 807 (818)
+..|.+.|.++|+.+.++ |+.+|+.---.++++||+.+++.|+-+.++
T Consensus 321 ~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 321 AKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred HHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 567889999999988752 478999888889999999999999877653
No 477
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=94.39 E-value=4.5 Score=45.40 Aligned_cols=86 Identities=14% Similarity=0.133 Sum_probs=55.1
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeeccc-CcccCC-ccchhc---
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFT-GFWRLG-VETTAD--- 676 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~T-GfGRtG-~~~a~e--- 676 (818)
+.|++.++++. .+-.--+.||+.|- +-.|-+. ..+-++++...|.++|++|++|||+- -..-.| +|..+.
T Consensus 201 ~el~~~~~eA~--k~i~~r~lvvINPG--NPTGqvl-s~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl 275 (475)
T KOG0258|consen 201 AELERSVDEAR--KGINPRALVVINPG--NPTGQVL-SEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVL 275 (475)
T ss_pred HHHHHHHHHHh--ccCCceEEEEECCC--Cccchhh-cHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHH
Confidence 34555555421 12233578999995 5556655 88999999999999999999999965 344555 344432
Q ss_pred -ccC-CCCcE------EEeccccc
Q 003466 677 -LLG-CVPDI------ACYGKLLT 692 (818)
Q Consensus 677 -~~g-v~PDi------vtlgKgLg 692 (818)
+.| --||- -..|||.-
T Consensus 276 ~emg~~~~~~v~L~SfhSvSKGy~ 299 (475)
T KOG0258|consen 276 HEMGNPYPDNVSLASFHSVSKGYM 299 (475)
T ss_pred HHhcCccCCceEEEeeecccccce
Confidence 123 34542 25678764
No 478
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose [, ]. More than 1% of the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect [, ]. The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella [, , ]. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 cellular biogenic amine metabolic process
Probab=94.36 E-value=0.81 Score=44.72 Aligned_cols=62 Identities=19% Similarity=0.020 Sum_probs=46.0
Q ss_pred CchhhHhhhCCCCEEEEEc-CCCC-hHHHHHHHHHHHHhCCCcEEEEEEccCCCCCHHHHHHhhc
Q 003466 240 SLQCDLYRPFRLPGILVGD-GRLG-GISGTISAYESLKLRGYDVVAVVFEDHGLVNEVPLMSYLR 302 (818)
Q Consensus 240 ~~~~dla~~l~~pvilV~~-~~~g-~i~~~~~~~~~l~~~~~~v~gvi~N~~~~~~~~~l~~~~~ 302 (818)
...-.+++.++.|||=|+. .++- .-...-.+.+.|+..|++=. +.++-+..+..+.|.++++
T Consensus 79 ~~pP~fa~~f~~pvIGVITK~Dl~~~~~~i~~a~~~L~~aG~~~i-f~vS~~~~eGi~eL~~~L~ 142 (143)
T PF10662_consen 79 VFPPGFASMFNKPVIGVITKIDLPSDDANIERAKKWLKNAGVKEI-FEVSAVTGEGIEELKDYLE 142 (143)
T ss_pred cCCchhhcccCCCEEEEEECccCccchhhHHHHHHHHHHcCCCCe-EEEECCCCcCHHHHHHHHh
Confidence 3446678889999998777 6665 34555667788888887633 7777777888888888873
No 479
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=94.25 E-value=0.86 Score=48.46 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=32.6
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
|++.++|.+.-.|||||++++.|..+|. ++|.+|..+-
T Consensus 1 m~~i~~i~~~KGGvGKSt~a~~la~~l~-----~~g~~vl~iD 38 (241)
T PRK13886 1 MAKIHMVLQGKGGVGKSFIAATIAQYKA-----SKGQKPLCID 38 (241)
T ss_pred CCeEEEEecCCCCCcHHHHHHHHHHHHH-----hCCCCEEEEE
Confidence 4677899999999999999999999994 7788887654
No 480
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=94.14 E-value=0.27 Score=53.57 Aligned_cols=36 Identities=25% Similarity=0.337 Sum_probs=30.1
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCC-C-CceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSA-N-KKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~-g-~~v~~~K 78 (818)
.+.++|.|. ||+||||+++.|+..+. .+ | .+|+++.
T Consensus 194 ~~vi~~vGp-tGvGKTTt~~kLa~~~~-----~~~g~~~V~li~ 231 (282)
T TIGR03499 194 GGVIALVGP-TGVGKTTTLAKLAARFV-----LEHGNKKVALIT 231 (282)
T ss_pred CeEEEEECC-CCCCHHHHHHHHHHHHH-----HHcCCCeEEEEE
Confidence 457888897 89999999999999984 33 4 8888887
No 481
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=94.11 E-value=1.6 Score=48.25 Aligned_cols=97 Identities=11% Similarity=0.120 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHhccccccccccccCCCCEEEEeCCCCCCCcCC---CCCchhhHhhhCCCC-----EEEEEcCCCC--hH
Q 003466 195 SKVIETLGKCLRDGLESESESERGKMEILCIVETAGGVASPGP---SGSLQCDLYRPFRLP-----GILVGDGRLG--GI 264 (818)
Q Consensus 195 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vivEGagg~~~p~~---~~~~~~dla~~l~~p-----vilV~~~~~g--~i 264 (818)
..+.+++++...+ .+|+|||.+||=+..-.+ +=.-..++++.. .| ++||.|.-.| ++
T Consensus 208 aVafDAi~~Akar------------~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~-~~~ap~e~llvlDAttGqnal 274 (340)
T COG0552 208 AVAFDAIQAAKAR------------GIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKD-DPDAPHEILLVLDATTGQNAL 274 (340)
T ss_pred HHHHHHHHHHHHc------------CCCEEEEeCcccccCchhHHHHHHHHHHHhccc-cCCCCceEEEEEEcccChhHH
Confidence 3566677766654 499999999996554321 111223444443 33 8888887665 34
Q ss_pred HHHHHHHHHHHhCCCcEEEEEEccCCCC----CHHHHHHhhcCCCCEEecC
Q 003466 265 SGTISAYESLKLRGYDVVAVVFEDHGLV----NEVPLMSYLRNRVPVLVLP 311 (818)
Q Consensus 265 ~~~~~~~~~l~~~~~~v~gvi~N~~~~~----~~~~l~~~~~~~~pvlgiP 311 (818)
+|+-. +. .-..|-|+|+.+...+ -.-.|...+ ++||+-|-
T Consensus 275 ~QAk~----F~-eav~l~GiIlTKlDgtAKGG~il~I~~~l--~~PI~fiG 318 (340)
T COG0552 275 SQAKI----FN-EAVGLDGIILTKLDGTAKGGIILSIAYEL--GIPIKFIG 318 (340)
T ss_pred HHHHH----HH-HhcCCceEEEEecccCCCcceeeeHHHHh--CCCEEEEe
Confidence 44433 22 2356899999998321 233455666 89987643
No 482
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=94.09 E-value=0.055 Score=60.23 Aligned_cols=69 Identities=17% Similarity=0.240 Sum_probs=38.4
Q ss_pred HHHHHHHHHhcCCcEEEeecc------cCcccCCccchhcccCCCCcEEEec--ccccCCccccceeecchHHHhhccC
Q 003466 643 QRILVKECQNRKIPVIFDEVF------TGFWRLGVETTADLLGCVPDIACYG--KLLTGGVIPLAATLATNAVFDSFVG 713 (818)
Q Consensus 643 l~~LreLc~~~gilLI~DEV~------TGfGRtG~~~a~e~~gv~PDivtlg--KgLggGy~PlsAvl~~~~i~~~l~~ 713 (818)
++++.+++++|++++|.|=.- +.+|-.++.-..+...--+|++||| |.|||= --|.+++++++++.++.
T Consensus 159 ~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGP--QaGiI~Gkk~lI~~lk~ 235 (367)
T PF03841_consen 159 LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGP--QAGIIVGKKELIEKLKK 235 (367)
T ss_dssp --HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS---S-EEEEEEHHHHHHHHH
T ss_pred HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCC--CeEEEEeCHHHHHHHhh
Confidence 899999999999999999543 1122223333333334457999997 677772 23457789999997764
No 483
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=93.87 E-value=0.16 Score=57.42 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=34.3
Q ss_pred CCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEce
Q 003466 36 SHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKP 79 (818)
Q Consensus 36 ~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KP 79 (818)
+|+.+-|+|. +|+||||+...|++.|. ++|++|++.|=
T Consensus 204 ~~~~~~~~g~-~~~GKtt~~~~l~~~l~-----~~g~~v~~iKh 241 (366)
T PRK14489 204 APPLLGVVGY-SGTGKTTLLEKLIPELI-----ARGYRIGLIKH 241 (366)
T ss_pred CccEEEEecC-CCCCHHHHHHHHHHHHH-----HcCCEEEEEEE
Confidence 4778999995 99999999999999994 88999999994
No 484
>COG2403 Predicted GTPase [General function prediction only]
Probab=93.86 E-value=0.05 Score=60.01 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=36.4
Q ss_pred CCCCCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 34 PLSHPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 34 ~~~~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
....+.|-|+||+|++|||+||..++|.| + .+|++|+...
T Consensus 123 ~~ekPviaV~atrtg~GKsaVS~~v~r~l----~-ergyrv~vVr 162 (449)
T COG2403 123 KLEKPVIAVTATRTGVGKSAVSRYVARLL----R-ERGYRVCVVR 162 (449)
T ss_pred hhcCceEEEEEeccccchhHHHHHHHHHH----H-HcCCceEEEe
Confidence 35578999999999999999999999999 4 8999999887
No 485
>KOG2749 consensus mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1 [RNA processing and modification]
Probab=93.81 E-value=0.19 Score=55.38 Aligned_cols=36 Identities=14% Similarity=0.280 Sum_probs=31.1
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
-|++||.|. +++||||+|.-|+.+.. ++|.++.|.-
T Consensus 103 GPrv~vVGp-~d~GKsTl~r~L~nyav-----k~gr~Plfv~ 138 (415)
T KOG2749|consen 103 GPRVMVVGP-TDVGKSTLCRILLNYAV-----KQGRRPLFVE 138 (415)
T ss_pred CCEEEEECC-CccchHHHHHHHHHHHH-----HcCCcceEEE
Confidence 467999997 89999999999999995 7788887765
No 486
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=93.77 E-value=0.069 Score=46.71 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=29.9
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 40 FQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 40 ~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
++++|.. |+|||+++..|++.|. +.|.+|..++
T Consensus 2 ~~~~g~~-G~Gktt~~~~l~~~l~-----~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKG-GVGKTTLAANLAAALA-----KRGKRVLLID 34 (99)
T ss_pred EEEECCC-CCCHHHHHHHHHHHHH-----HCCCeEEEEC
Confidence 5788888 9999999999999994 7799999998
No 487
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=93.74 E-value=4.9 Score=45.47 Aligned_cols=48 Identities=15% Similarity=-0.080 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhCCceEeecC---CEEEEECCCCChHHHHHHHHHHHHHHH
Q 003466 758 LYAASLLKKLREDGVYMRPLG---NVIYLMCGPCSSPEVCSQLLLKLYQRL 805 (818)
Q Consensus 758 ~~a~~~~~~l~e~Gvlv~p~g---~~ir~~ppl~~t~edId~~~~~l~~~l 805 (818)
.....|.+.+.++|++.-.+. ..+|.+.=-.++.|+++.+++-+.+.-
T Consensus 310 ~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~ 360 (364)
T PRK12462 310 RLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFA 360 (364)
T ss_pred HHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 567789999999999885421 347777766789999998888776654
No 488
>TIGR00073 hypB hydrogenase accessory protein HypB. HypB is implicated in insertion of nickel into the large subunit of NiFe hydrogenases.
Probab=93.58 E-value=1.7 Score=44.86 Aligned_cols=35 Identities=17% Similarity=0.215 Sum_probs=29.7
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.+.+.|+|. .|+||||+...|++.+ .++.+++.++
T Consensus 22 ~~~i~~~G~-~gsGKTTli~~l~~~~------~~~~~v~v~~ 56 (207)
T TIGR00073 22 LVVLNFMSS-PGSGKTTLIEKLIDNL------KDEVKIAVIE 56 (207)
T ss_pred cEEEEEECC-CCCCHHHHHHHHHHHH------hcCCeEEEEE
Confidence 557888887 8999999999999988 4467888888
No 489
>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=93.52 E-value=0.97 Score=52.81 Aligned_cols=36 Identities=25% Similarity=0.354 Sum_probs=27.4
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCC-CceeEE
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSAN-KKFVYL 77 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g-~~v~~~ 77 (818)
-..+.+.|. +|+||||++.-|+..+. . ++| ++|+..
T Consensus 256 g~Vi~LvGp-nGvGKTTTiaKLA~~~~---~-~~G~~kV~LI 292 (484)
T PRK06995 256 GGVFALMGP-TGVGKTTTTAKLAARCV---M-RHGASKVALL 292 (484)
T ss_pred CcEEEEECC-CCccHHHHHHHHHHHHH---H-hcCCCeEEEE
Confidence 356889998 89999999999998884 2 445 466533
No 490
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=93.39 E-value=0.95 Score=48.01 Aligned_cols=180 Identities=18% Similarity=0.203 Sum_probs=100.5
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCcccCCccchhcccCCC
Q 003466 602 SYISQNLLQNPGLKVSGCIGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGFWRLGVETTADLLGCV 681 (818)
Q Consensus 602 ~~Le~~L~~~~~~~~~~~iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGfGRtG~~~a~e~~gv~ 681 (818)
+++.+.++. ...+.++++-.- ....|... ..+-+.++-+.=+ +.++++||+.--| .|......+-.--
T Consensus 149 dai~evl~~------ds~iK~~F~tSP-gNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYidF--sg~~S~~~lV~kY 216 (375)
T KOG0633|consen 149 DAIAEVLEL------DSKIKCIFLTSP-GNPTGSII-KEDDILKILEMPD--NGLVVVDEAYIDF--SGVESRMKLVKKY 216 (375)
T ss_pred HHHHHHHhc------cccceEEEEcCC-CCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeEee--ccccccchHhHhC
Confidence 455556642 346776666542 45566655 4445555555444 7899999998766 3433333332334
Q ss_pred CcEE---Eeccccc-CCccccceeecchHHHhhccCChH------------------------------HHH--HHHHHH
Q 003466 682 PDIA---CYGKLLT-GGVIPLAATLATNAVFDSFVGDSK------------------------------LWD--LELIQQ 725 (818)
Q Consensus 682 PDiv---tlgKgLg-gGy~PlsAvl~~~~i~~~l~~~~~------------------------------~~~--~~l~~~ 725 (818)
|.++ ||||+.| .| +-+|..+.+.++++.+...-. +.+ .++...
T Consensus 217 pNLivlqTlSKsfGLAG-iRvG~~~~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~ke 295 (375)
T KOG0633|consen 217 PNLIVLQTLSKSFGLAG-IRVGYGAFPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKE 295 (375)
T ss_pred CceeehhhhhhhcCcce-eEeecccccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHH
Confidence 6765 7999887 45 677778888888775532100 111 234445
Q ss_pred HHcCCCeeEEEeeee---EEEEEEecCcccCCCchHHHHHHHHH-HHhCCceEeecC------CEEEEECCCCChHHHHH
Q 003466 726 ISSHRTVQRVVALGT---LCAIELQAAGCNAGYGSLYAASLLKK-LREDGVYMRPLG------NVIYLMCGPCSSPEVCS 795 (818)
Q Consensus 726 l~~~~~v~~vrg~Gl---~~~iel~~~~~~~~~~~~~a~~~~~~-l~e~Gvlv~p~g------~~ir~~ppl~~t~edId 795 (818)
+...+.+.+.-| |. ++-++.... +...+..+... +-..||.++-.| .-+|++. =|+||=+
T Consensus 296 Lt~v~~~~~~~g-g~daNFiLi~v~~~------~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitv---Gt~Eent 365 (375)
T KOG0633|consen 296 LTEVPFLNDYPG-GSDANFILIEVTGG------DNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITV---GTPEENT 365 (375)
T ss_pred hhcCccccCCCC-cccccEEEEEEcCC------CcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEc---CCcccch
Confidence 555555544221 22 333333321 12344444444 447899998643 4566654 3466667
Q ss_pred HHHHHHHHH
Q 003466 796 QLLLKLYQR 804 (818)
Q Consensus 796 ~~~~~l~~~ 804 (818)
.+++.|++.
T Consensus 366 vL~k~~K~~ 374 (375)
T KOG0633|consen 366 VLMKCLKQF 374 (375)
T ss_pred HHHHHHHhh
Confidence 777766554
No 491
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional
Probab=93.11 E-value=1.5 Score=47.83 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=24.0
Q ss_pred eEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 39 TFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 39 ~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
.+-|+|. .|+||||+...|++.|. ...+++.+.
T Consensus 106 ~v~l~G~-pGsGKTTLl~~l~~~l~------~~~~~~VI~ 138 (290)
T PRK10463 106 VLNLVSS-PGSGKTTLLTETLMRLK------DSVPCAVIE 138 (290)
T ss_pred EEEEECC-CCCCHHHHHHHHHHHhc------cCCCEEEEC
Confidence 3455555 89999999999999992 234666654
No 492
>PRK05595 replicative DNA helicase; Provisional
Probab=92.95 E-value=0.63 Score=54.01 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=30.6
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..+.|.|..+|+|||++++-++..+. . ++|.+|.+|=
T Consensus 201 g~liviaarpg~GKT~~al~ia~~~a---~-~~g~~vl~fS 237 (444)
T PRK05595 201 GDMILIAARPSMGKTTFALNIAEYAA---L-REGKSVAIFS 237 (444)
T ss_pred CcEEEEEecCCCChHHHHHHHHHHHH---H-HcCCcEEEEe
Confidence 45888899999999999999997542 2 6699999996
No 493
>PRK14722 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=92.74 E-value=2.3 Score=48.17 Aligned_cols=37 Identities=24% Similarity=0.332 Sum_probs=27.8
Q ss_pred CCeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCC-CceeEEc
Q 003466 37 HPTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSAN-KKFVYLK 78 (818)
Q Consensus 37 ~~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g-~~v~~~K 78 (818)
...+.+.|. ||+||||+.+.|+..+. . +.| .+|+++-
T Consensus 137 g~ii~lvGp-tGvGKTTtiakLA~~~~---~-~~G~~~V~lit 174 (374)
T PRK14722 137 GGVFALMGP-TGVGKTTTTAKLAARCV---M-RFGASKVALLT 174 (374)
T ss_pred CcEEEEECC-CCCCHHHHHHHHHHHHH---H-hcCCCeEEEEe
Confidence 456888887 89999999999998763 2 445 4666554
No 494
>PRK08506 replicative DNA helicase; Provisional
Probab=92.74 E-value=1.1 Score=52.35 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=31.2
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..++|.|..+|+|||++++-++..+. ++|.+|.+|=
T Consensus 192 G~LivIaarpg~GKT~fal~ia~~~~-----~~g~~V~~fS 227 (472)
T PRK08506 192 GDLIIIAARPSMGKTTLCLNMALKAL-----NQDKGVAFFS 227 (472)
T ss_pred CceEEEEcCCCCChHHHHHHHHHHHH-----hcCCcEEEEe
Confidence 34999999999999999999998773 6789999995
No 495
>TIGR00665 DnaB replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites.
Probab=92.70 E-value=0.83 Score=52.76 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=30.0
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..+.|.+..+|+|||++++-++..+. . +.|.+|.||=
T Consensus 195 G~l~vi~g~pg~GKT~~~l~~a~~~a---~-~~g~~vl~~S 231 (434)
T TIGR00665 195 SDLIILAARPSMGKTAFALNIAENAA---I-KEGKPVAFFS 231 (434)
T ss_pred CeEEEEEeCCCCChHHHHHHHHHHHH---H-hCCCeEEEEe
Confidence 34888888999999999999887652 2 4688899985
No 496
>PRK08760 replicative DNA helicase; Provisional
Probab=92.70 E-value=0.8 Score=53.66 Aligned_cols=37 Identities=16% Similarity=0.237 Sum_probs=30.7
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..+.|.+..+|+|||++++-++.... . +.|.+|.+|=
T Consensus 229 G~LivIaarPg~GKTafal~iA~~~a---~-~~g~~V~~fS 265 (476)
T PRK08760 229 TDLIILAARPAMGKTTFALNIAEYAA---I-KSKKGVAVFS 265 (476)
T ss_pred CceEEEEeCCCCChhHHHHHHHHHHH---H-hcCCceEEEe
Confidence 35889999999999999999997652 2 5688999995
No 497
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=92.63 E-value=6.1 Score=46.73 Aligned_cols=162 Identities=19% Similarity=0.152 Sum_probs=93.7
Q ss_pred ChhHHHHHHHHHhccCCCCCCcEEEeCChhHHHHHHHHHHHHHhhhcccccccccCCCccccccceEEEEEcCCCCCCcc
Q 003466 442 YEPALECAELLLQGVGKGWASRAYFSDNGSTAIEIALKMAFRKFSFDHEVLVDFLGKDTTEKCIELKVLALKGSYHGDTL 521 (818)
Q Consensus 442 ~~~~~eLae~L~~~~~~~~l~~v~f~~SGseA~e~ALklA~r~~t~~~G~~~~~~~~~~~~~~~r~~II~~~~sYHG~t~ 521 (818)
+.+..|..|..++.++ .++.+|...|+.+---++-+|. ..+.+.|.++...|=+..
T Consensus 69 ~G~i~eAqe~aA~~fg---Ad~tyFvvNGTS~ank~vi~a~---------------------~~~GD~VLvdRN~HKSi~ 124 (557)
T COG1982 69 EGPIKEAQELAARVFG---ADHTYFVVNGTSTANKAVINAV---------------------LTPGDKVLVDRNCHKSIH 124 (557)
T ss_pred CccHHHHHHHHHHHhC---CCceEEEECCccHHHHHHHHhh---------------------cCCCCEEEecCCccHHHH
Confidence 3456677777777787 3677776666554444444441 234578999999999988
Q ss_pred ccccccCCC-CCCCcCCCCcccCCCcccCCCcccccCcceeecCcchhhhhccccccccccCccchhhcccCchhHHHHH
Q 003466 522 GAMEAQAPS-PYTGFLQQPWYSGRGLFLDPPTVFMYNSKWILSLPEWLYSKIVEHKDITFCSRDEIFYEERDSSDLASIY 600 (818)
Q Consensus 522 ~als~tg~~-~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~v~~P~~~~~~~~~~~~~~~nd~~~~~~~~~~~~~~~~~~ 600 (818)
.++-++|.. .|-.+ .. +..+. ++ .-+ +
T Consensus 125 ~glilaGa~Pvyl~p---------------~~----np~~g--i~---------------ggI--------~-------- 152 (557)
T COG1982 125 HGLILAGATPVYLEP---------------SR----NPLYG--II---------------GGI--------P-------- 152 (557)
T ss_pred HHHHHcCCceEEecC---------------CC----Ccccc--cc---------------CCC--------C--------
Confidence 888888743 22111 00 00000 00 000 0
Q ss_pred HHHHHHHHhcCCCCCCCCc-EEEEEEccccccCCCcccCCHHHHHHHHHHHHhcCCcEEEeecccCc--ccCCccchhcc
Q 003466 601 SSYISQNLLQNPGLKVSGC-IGALIIEPVVHAAGGMHMVDPLFQRILVKECQNRKIPVIFDEVFTGF--WRLGVETTADL 677 (818)
Q Consensus 601 ~~~Le~~L~~~~~~~~~~~-iAAVIvEPV~~g~gG~~~~p~~fl~~LreLc~~~gilLI~DEV~TGf--GRtG~~~a~e~ 677 (818)
.+.+++.+.+ ++.. -.+||+-|-+ .|+..- ++++++++.++++.+..||+| |+ +..+...- ..
T Consensus 153 ~~~~~~~l~~-----~~~~~k~~vitnpTY---dGv~~n----~~~i~~~~~~~~a~v~~deah-~~~~~~~~~l~~-~~ 218 (557)
T COG1982 153 LETFKEALLA-----HPDAEKLAVITNPTY---DGVCYN----LRKIVELLHHYGAWVLYDEAH-PAHFDFSPMLPE-SA 218 (557)
T ss_pred HHHHHHHHHh-----ChhhheeEEEecCcc---ceEeec----HHHHHHHHhhcCceEEhhhcC-cccccccccCcc-hh
Confidence 1334444442 3444 6799999975 345554 899999999999999999999 54 22222222 12
Q ss_pred cCCCCcEEEec--ccccC
Q 003466 678 LGCVPDIACYG--KLLTG 693 (818)
Q Consensus 678 ~gv~PDivtlg--KgLgg 693 (818)
..-..|++|-| |-|++
T Consensus 219 ~~~~~~~~tqS~HK~l~a 236 (557)
T COG1982 219 LNGGADFVTQSTHKLLAA 236 (557)
T ss_pred hhcCceEEEechhhhhhh
Confidence 22345777766 45554
No 498
>PRK05636 replicative DNA helicase; Provisional
Probab=92.59 E-value=0.82 Score=53.88 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=29.9
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEc
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLK 78 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~K 78 (818)
..++|.+..+|+|||++++-+++... . +.|.+|.+|=
T Consensus 265 G~Liiiaarpg~GKT~~al~~a~~~a---~-~~g~~v~~fS 301 (505)
T PRK05636 265 GQMIIVAARPGVGKSTLALDFMRSAS---I-KHNKASVIFS 301 (505)
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHH---H-hCCCeEEEEE
Confidence 34888899999999999999987652 2 5688898884
No 499
>PHA02542 41 41 helicase; Provisional
Probab=92.43 E-value=1.1 Score=52.28 Aligned_cols=48 Identities=17% Similarity=0.279 Sum_probs=36.6
Q ss_pred CeEEEEeCCCCCcHHHHHHHHHHHhhcCCCCCCCCceeEEceeccCCCCCCchHHHHHh
Q 003466 38 PTFQIWSANTSLGKTLVSAGLSSSFLLSPTSSANKKFVYLKPIQTGYPHDSDSRFLFTK 96 (818)
Q Consensus 38 ~~~~i~gt~t~~GKT~v~~~L~~~l~~~~~~~~g~~v~~~KPi~~g~~~~~d~~~~~~~ 96 (818)
..+.|.+..+|+|||++++-++.... ++|++|.+|= -+.+..+++.+.
T Consensus 190 G~LiiIaarPgmGKTtfalniA~~~a-----~~g~~Vl~fS------LEM~~~ql~~Rl 237 (473)
T PHA02542 190 KTLNVLLAGVNVGKSLGLCSLAADYL-----QQGYNVLYIS------MEMAEEVIAKRI 237 (473)
T ss_pred CcEEEEEcCCCccHHHHHHHHHHHHH-----hcCCcEEEEe------ccCCHHHHHHHH
Confidence 35889999999999999999998873 6799999995 233444555554
No 500
>TIGR00101 ureG urease accessory protein UreG. This model represents UreG, a GTP hydrolase that acts in the assembly of the nickel metallocenter of urease. It is found only in urease-positive species, although some urease-positive species (e.g. Bacillus subtilis) lack this protein. A similar protein, hypB, is an accessory protein for expression of hydrogenase, which also uses nickel.
Probab=92.28 E-value=3.2 Score=42.80 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=19.0
Q ss_pred EEEEeCCCCCcHHHHHHHHHHHh
Q 003466 40 FQIWSANTSLGKTLVSAGLSSSF 62 (818)
Q Consensus 40 ~~i~gt~t~~GKT~v~~~L~~~l 62 (818)
+-|+|. .|+||||+...|++.+
T Consensus 4 i~i~G~-~GsGKTTll~~l~~~l 25 (199)
T TIGR00101 4 IGVAGP-VGSGKTALIEALTRAL 25 (199)
T ss_pred EEEECC-CCCCHHHHHHHHHHhh
Confidence 566665 8999999999999998
Done!