Query 003468
Match_columns 817
No_of_seqs 378 out of 3028
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 23:59:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003468.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003468hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 1E-141 3E-146 1146.7 61.3 752 24-811 2-763 (972)
2 KOG0204 Calcium transporting A 100.0 1E-124 3E-129 1012.3 50.9 715 29-812 101-825 (1034)
3 TIGR01523 ATPase-IID_K-Na pota 100.0 5E-120 1E-124 1084.0 76.1 744 21-813 2-833 (1053)
4 COG0474 MgtA Cation transport 100.0 4E-119 8E-124 1066.9 66.3 709 17-815 14-728 (917)
5 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2E-115 5E-120 1048.5 74.3 729 24-815 15-773 (997)
6 PRK10517 magnesium-transportin 100.0 1E-113 2E-118 1016.9 70.7 671 21-812 44-723 (902)
7 PRK15122 magnesium-transportin 100.0 2E-113 4E-118 1017.3 71.0 695 8-811 2-722 (903)
8 TIGR01517 ATPase-IIB_Ca plasma 100.0 3E-112 6E-117 1019.9 73.1 708 29-813 42-756 (941)
9 TIGR01522 ATPase-IIA2_Ca golgi 100.0 8E-112 2E-116 1010.0 75.1 693 24-811 2-703 (884)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 1E-111 3E-116 1000.9 71.7 667 23-811 12-687 (867)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3E-108 6E-113 981.3 71.6 710 75-812 1-716 (917)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 1E-106 3E-111 946.9 67.6 616 45-811 1-619 (755)
13 KOG0203 Na+/K+ ATPase, alpha s 100.0 2E-107 4E-112 878.4 32.7 728 23-813 36-793 (1019)
14 TIGR01657 P-ATPase-V P-type AT 100.0 2E-103 5E-108 950.8 66.3 673 43-809 137-882 (1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 2E-96 4E-101 893.8 53.7 724 58-816 1-858 (1057)
16 PLN03190 aminophospholipid tra 100.0 1.9E-93 4.2E-98 855.9 62.2 725 56-816 85-961 (1178)
17 PRK14010 potassium-transportin 100.0 2E-91 4.3E-96 789.0 57.5 559 77-815 28-592 (673)
18 KOG0208 Cation transport ATPas 100.0 3.3E-91 7.2E-96 764.2 48.5 687 43-809 158-933 (1140)
19 PRK01122 potassium-transportin 100.0 1.8E-88 4E-93 765.7 59.7 547 77-798 29-579 (679)
20 TIGR01497 kdpB K+-transporting 100.0 3.4E-85 7.4E-90 737.1 58.5 554 77-804 28-586 (675)
21 KOG0205 Plasma membrane H+-tra 100.0 2.8E-84 6E-89 678.2 38.5 653 16-811 8-669 (942)
22 COG2217 ZntA Cation transport 100.0 6.4E-80 1.4E-84 695.2 55.1 511 112-811 173-684 (713)
23 KOG0206 P-type ATPase [General 100.0 2.6E-82 5.7E-87 731.3 35.7 730 54-817 28-885 (1151)
24 KOG0210 P-type ATPase [Inorgan 100.0 1E-80 2.2E-85 654.5 33.6 706 53-817 74-870 (1051)
25 PRK11033 zntA zinc/cadmium/mer 100.0 9E-77 2E-81 692.6 56.9 506 112-810 205-712 (741)
26 KOG0207 Cation transport ATPas 100.0 2.3E-76 4.9E-81 648.8 40.0 525 116-809 344-868 (951)
27 TIGR01494 ATPase_P-type ATPase 100.0 5.7E-75 1.2E-79 657.7 51.4 480 121-811 4-486 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 3.2E-74 6.9E-79 657.0 54.2 515 112-812 17-533 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.1E-73 4.5E-78 645.6 51.4 495 112-812 17-512 (536)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 2.2E-72 4.8E-77 639.0 59.3 499 112-812 53-552 (562)
31 KOG0209 P-type ATPase [Inorgan 100.0 4.6E-75 1E-79 623.0 34.7 636 10-753 132-834 (1160)
32 PRK10671 copA copper exporting 100.0 6.2E-71 1.3E-75 657.8 59.5 507 113-807 285-793 (834)
33 COG2216 KdpB High-affinity K+ 100.0 4.8E-61 1E-65 493.0 34.9 533 80-784 31-567 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 7E-36 1.5E-40 304.9 21.4 228 119-373 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 2.9E-21 6.4E-26 195.4 13.0 97 620-745 115-215 (215)
36 KOG4383 Uncharacterized conser 99.8 2.5E-17 5.4E-22 175.1 26.9 274 536-811 697-1109(1354)
37 COG4087 Soluble P-type ATPase 99.6 3.2E-14 6.8E-19 121.3 11.4 125 621-777 19-145 (152)
38 PF00690 Cation_ATPase_N: Cati 99.5 4E-14 8.7E-19 113.4 8.0 69 26-94 1-69 (69)
39 PF13246 Hydrolase_like2: Puta 99.5 6.1E-14 1.3E-18 118.7 7.5 88 445-548 1-90 (91)
40 COG0561 Cof Predicted hydrolas 99.4 6.5E-12 1.4E-16 131.0 15.4 155 625-780 12-259 (264)
41 PRK10513 sugar phosphate phosp 99.3 1.5E-11 3.2E-16 128.9 15.3 57 723-780 210-266 (270)
42 PRK10976 putative hydrolase; P 99.3 1.3E-11 2.8E-16 129.0 14.6 55 724-779 205-261 (266)
43 PRK15126 thiamin pyrimidine py 99.3 9.3E-12 2E-16 130.4 12.9 66 713-779 188-259 (272)
44 PRK01158 phosphoglycolate phos 99.3 3.7E-11 7.9E-16 122.7 15.2 152 625-779 12-226 (230)
45 PLN02887 hydrolase family prot 99.3 2.7E-11 5.9E-16 136.5 13.9 54 725-779 523-576 (580)
46 smart00831 Cation_ATPase_N Cat 99.3 1.4E-11 3.1E-16 97.2 7.2 62 37-98 2-63 (64)
47 TIGR01487 SPP-like sucrose-pho 99.3 4.2E-11 9.1E-16 120.7 12.2 146 632-778 18-215 (215)
48 TIGR01482 SPP-subfamily Sucros 99.2 2E-10 4.2E-15 116.9 14.4 147 632-779 15-222 (225)
49 PRK10530 pyridoxal phosphate ( 99.2 2.1E-10 4.6E-15 120.4 14.9 55 724-779 214-268 (272)
50 PF08282 Hydrolase_3: haloacid 99.2 1.7E-10 3.7E-15 119.6 13.5 147 631-778 14-254 (254)
51 PRK03669 mannosyl-3-phosphogly 99.1 1.2E-09 2.5E-14 114.2 15.0 147 633-779 25-265 (271)
52 TIGR01486 HAD-SF-IIB-MPGP mann 99.1 1.6E-09 3.6E-14 112.2 15.3 148 633-780 17-254 (256)
53 PRK11133 serB phosphoserine ph 99.1 5.3E-10 1.1E-14 117.9 11.5 127 632-779 181-316 (322)
54 TIGR02726 phenyl_P_delta pheny 99.1 5.1E-10 1.1E-14 106.3 9.5 108 639-776 41-148 (169)
55 TIGR02137 HSK-PSP phosphoserin 99.0 9.4E-10 2E-14 108.6 10.6 129 632-781 68-198 (203)
56 TIGR00099 Cof-subfamily Cof su 99.0 1.5E-09 3.2E-14 112.7 12.1 65 713-778 188-256 (256)
57 TIGR01670 YrbI-phosphatas 3-de 99.0 1.7E-09 3.7E-14 102.1 10.1 110 640-779 36-146 (154)
58 PRK00192 mannosyl-3-phosphogly 98.9 3E-08 6.5E-13 103.8 14.9 66 713-779 190-267 (273)
59 COG0560 SerB Phosphoserine pho 98.8 2.2E-08 4.8E-13 99.3 10.2 119 631-768 76-201 (212)
60 TIGR00338 serB phosphoserine p 98.8 2.1E-08 4.5E-13 101.5 9.7 125 632-777 85-218 (219)
61 PRK09484 3-deoxy-D-manno-octul 98.7 5.5E-08 1.2E-12 94.8 9.3 103 639-775 55-161 (183)
62 TIGR02471 sucr_syn_bact_C sucr 98.7 1.5E-07 3.2E-12 96.3 11.6 67 713-780 159-233 (236)
63 TIGR01485 SPP_plant-cyano sucr 98.6 5.7E-07 1.2E-11 92.8 13.4 150 630-780 19-245 (249)
64 COG1778 Low specificity phosph 98.5 1.5E-07 3.2E-12 84.2 6.3 115 639-787 42-164 (170)
65 PRK13582 thrH phosphoserine ph 98.5 5.1E-07 1.1E-11 90.3 10.4 125 632-778 68-195 (205)
66 PLN02382 probable sucrose-phos 98.5 2.2E-06 4.8E-11 94.2 15.3 67 712-779 174-257 (413)
67 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 1.2E-06 2.6E-11 87.3 9.8 117 632-763 80-200 (201)
68 KOG1615 Phosphoserine phosphat 98.4 5.7E-07 1.2E-11 83.3 5.9 109 633-751 89-199 (227)
69 TIGR02461 osmo_MPG_phos mannos 98.4 4.5E-06 9.8E-11 84.2 13.1 43 630-672 13-55 (225)
70 TIGR03333 salvage_mtnX 2-hydro 98.3 5.4E-06 1.2E-10 83.3 11.3 110 631-751 69-182 (214)
71 TIGR02463 MPGP_rel mannosyl-3- 98.2 1.5E-05 3.2E-10 80.8 13.7 40 633-672 17-56 (221)
72 PLN02954 phosphoserine phospha 98.2 1.3E-05 2.9E-10 81.3 11.8 127 632-776 84-221 (224)
73 PF12710 HAD: haloacid dehalog 98.2 4.9E-06 1.1E-10 82.2 7.7 92 635-742 92-192 (192)
74 PRK09552 mtnX 2-hydroxy-3-keto 98.2 1E-05 2.2E-10 81.7 10.1 107 632-749 74-184 (219)
75 PRK10187 trehalose-6-phosphate 98.1 2E-05 4.3E-10 81.7 12.4 140 632-778 36-240 (266)
76 COG0546 Gph Predicted phosphat 98.1 1.1E-05 2.3E-10 81.5 9.6 127 630-778 87-217 (220)
77 PRK14502 bifunctional mannosyl 98.1 3.7E-05 8.1E-10 87.0 13.5 48 625-672 425-473 (694)
78 PRK13222 phosphoglycolate phos 98.1 1.7E-05 3.8E-10 80.5 10.1 128 631-780 92-223 (226)
79 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2E-05 4.4E-10 77.4 8.9 114 631-749 71-186 (188)
80 TIGR01454 AHBA_synth_RP 3-amin 98.0 1.9E-05 4.1E-10 78.9 8.7 125 632-778 75-203 (205)
81 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 2.6E-05 5.7E-10 77.7 9.3 104 630-751 85-197 (202)
82 PTZ00174 phosphomannomutase; P 98.0 8.4E-05 1.8E-09 76.4 12.7 54 712-766 187-245 (247)
83 TIGR01488 HAD-SF-IB Haloacid D 97.9 1.9E-05 4.1E-10 76.8 7.3 94 633-744 74-177 (177)
84 cd01427 HAD_like Haloacid deha 97.9 3.5E-05 7.5E-10 71.0 7.8 118 628-749 20-138 (139)
85 PRK13223 phosphoglycolate phos 97.9 5.9E-05 1.3E-09 78.7 9.7 121 631-779 100-230 (272)
86 PRK12702 mannosyl-3-phosphogly 97.9 0.00014 3.1E-09 74.0 11.8 42 631-672 17-58 (302)
87 PRK13288 pyrophosphatase PpaX; 97.8 9.4E-05 2E-09 74.4 8.7 124 633-778 83-210 (214)
88 TIGR01484 HAD-SF-IIB HAD-super 97.7 0.00029 6.2E-09 70.3 11.1 39 632-670 17-55 (204)
89 TIGR01449 PGP_bact 2-phosphogl 97.7 0.0001 2.2E-09 74.2 7.7 122 632-775 85-210 (213)
90 PRK08238 hypothetical protein; 97.6 0.00026 5.7E-09 79.0 10.8 99 632-757 72-170 (479)
91 TIGR01544 HAD-SF-IE haloacid d 97.6 0.00058 1.3E-08 69.9 11.9 133 632-778 121-273 (277)
92 PRK13226 phosphoglycolate phos 97.6 0.00026 5.7E-09 71.9 9.3 125 632-778 95-224 (229)
93 PLN02770 haloacid dehalogenase 97.6 0.00042 9.1E-09 71.3 10.3 118 632-769 108-228 (248)
94 PRK10826 2-deoxyglucose-6-phos 97.5 0.00023 5E-09 72.0 7.8 118 631-768 91-211 (222)
95 TIGR01545 YfhB_g-proteo haloac 97.5 0.00065 1.4E-08 67.7 10.7 106 632-751 94-201 (210)
96 PF05116 S6PP: Sucrose-6F-phos 97.5 0.00076 1.6E-08 69.1 11.4 69 712-780 164-244 (247)
97 PRK11590 hypothetical protein; 97.5 0.00097 2.1E-08 66.8 11.2 106 632-751 95-202 (211)
98 PRK13225 phosphoglycolate phos 97.4 0.00086 1.9E-08 69.7 10.5 119 632-778 142-267 (273)
99 TIGR03351 PhnX-like phosphonat 97.4 0.00055 1.2E-08 69.2 8.6 123 631-776 86-217 (220)
100 PRK13478 phosphonoacetaldehyde 97.4 0.00098 2.1E-08 69.5 10.4 101 632-751 101-205 (267)
101 PLN03243 haloacid dehalogenase 97.3 0.0014 3E-08 67.6 10.3 117 632-768 109-226 (260)
102 TIGR01422 phosphonatase phosph 97.3 0.0011 2.3E-08 68.7 9.4 97 632-747 99-196 (253)
103 PRK14501 putative bifunctional 97.3 0.0043 9.3E-08 74.2 15.8 140 632-778 514-720 (726)
104 PRK11587 putative phosphatase; 97.3 0.0013 2.8E-08 66.3 9.5 116 632-768 83-199 (218)
105 PRK11009 aphA acid phosphatase 97.2 0.0016 3.4E-08 65.6 9.0 87 632-747 114-206 (237)
106 TIGR01672 AphA HAD superfamily 97.1 0.0011 2.4E-08 66.8 7.3 83 633-747 115-206 (237)
107 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.0014 3E-08 64.9 7.2 93 631-744 105-197 (197)
108 PLN02575 haloacid dehalogenase 97.0 0.0023 5E-08 68.8 9.1 120 632-774 216-337 (381)
109 TIGR01428 HAD_type_II 2-haloal 97.0 0.002 4.3E-08 63.9 7.6 98 632-749 92-189 (198)
110 PRK08942 D,D-heptose 1,7-bisph 97.0 0.004 8.8E-08 60.6 9.5 126 633-778 30-176 (181)
111 COG3769 Predicted hydrolase (H 96.9 0.0083 1.8E-07 57.4 10.1 37 636-672 27-63 (274)
112 TIGR01662 HAD-SF-IIIA HAD-supe 96.9 0.0038 8.2E-08 57.3 7.9 93 632-748 25-127 (132)
113 COG4359 Uncharacterized conser 96.9 0.0019 4.2E-08 59.8 5.7 106 632-750 73-184 (220)
114 PRK14988 GMP/IMP nucleotidase; 96.9 0.003 6.6E-08 63.8 7.8 94 632-751 93-194 (224)
115 smart00775 LNS2 LNS2 domain. T 96.8 0.0063 1.4E-07 57.4 9.3 103 630-747 25-141 (157)
116 PHA02530 pseT polynucleotide k 96.8 0.0044 9.4E-08 65.9 9.1 108 629-748 184-292 (300)
117 PRK06769 hypothetical protein; 96.8 0.0038 8.3E-08 60.2 7.3 98 633-749 29-134 (173)
118 TIGR02253 CTE7 HAD superfamily 96.8 0.0035 7.6E-08 63.3 7.4 100 632-751 94-195 (221)
119 PLN02779 haloacid dehalogenase 96.7 0.0076 1.6E-07 63.3 9.4 119 632-768 144-264 (286)
120 PF13419 HAD_2: Haloacid dehal 96.6 0.0023 4.9E-08 61.7 4.8 91 632-748 77-173 (176)
121 PRK09449 dUMP phosphatase; Pro 96.6 0.0085 1.8E-07 60.6 9.0 118 632-778 95-222 (224)
122 TIGR01685 MDP-1 magnesium-depe 96.6 0.0096 2.1E-07 57.0 8.7 112 623-751 36-156 (174)
123 TIGR01509 HAD-SF-IA-v3 haloaci 96.6 0.0066 1.4E-07 59.1 7.8 89 632-747 85-179 (183)
124 TIGR01990 bPGM beta-phosphoglu 96.5 0.0032 7E-08 61.5 5.2 95 632-748 87-181 (185)
125 TIGR02009 PGMB-YQAB-SF beta-ph 96.5 0.0038 8.2E-08 61.0 5.1 95 632-748 88-182 (185)
126 PRK06698 bifunctional 5'-methy 96.4 0.014 3E-07 65.9 10.1 123 632-779 330-454 (459)
127 TIGR00213 GmhB_yaeD D,D-heptos 96.4 0.012 2.5E-07 57.1 8.0 124 633-768 27-170 (176)
128 TIGR02254 YjjG/YfnB HAD superf 96.4 0.007 1.5E-07 61.2 6.7 95 632-747 97-193 (224)
129 PLN02940 riboflavin kinase 96.3 0.0095 2.1E-07 65.2 7.5 116 632-768 93-212 (382)
130 COG4030 Uncharacterized protei 96.2 0.023 5E-07 54.5 8.5 135 632-778 83-261 (315)
131 TIGR01668 YqeG_hyp_ppase HAD s 96.2 0.011 2.4E-07 56.8 6.7 88 632-748 43-132 (170)
132 TIGR01261 hisB_Nterm histidino 96.2 0.011 2.4E-07 56.1 6.4 100 633-749 30-144 (161)
133 TIGR02252 DREG-2 REG-2-like, H 96.2 0.014 3E-07 58.1 7.3 95 632-747 105-200 (203)
134 PLN02205 alpha,alpha-trehalose 96.1 0.041 8.8E-07 66.2 12.0 37 632-668 616-653 (854)
135 TIGR01656 Histidinol-ppas hist 96.0 0.012 2.6E-07 55.0 5.8 101 632-749 27-142 (147)
136 TIGR01533 lipo_e_P4 5'-nucleot 96.0 0.034 7.4E-07 57.0 9.3 87 630-742 116-205 (266)
137 TIGR01681 HAD-SF-IIIC HAD-supe 95.9 0.022 4.8E-07 51.8 6.7 93 632-743 29-126 (128)
138 TIGR01549 HAD-SF-IA-v1 haloaci 95.8 0.019 4.2E-07 54.1 6.2 90 633-745 65-154 (154)
139 smart00577 CPDc catalytic doma 95.7 0.014 3.1E-07 54.6 4.9 95 632-749 45-139 (148)
140 TIGR01691 enolase-ppase 2,3-di 95.7 0.03 6.5E-07 56.0 7.4 99 630-750 93-194 (220)
141 TIGR01675 plant-AP plant acid 95.6 0.075 1.6E-06 53.0 9.7 81 631-739 119-210 (229)
142 PLN02811 hydrolase 95.5 0.035 7.7E-07 55.9 7.1 100 632-749 78-181 (220)
143 TIGR01664 DNA-3'-Pase DNA 3'-p 95.3 0.046 1E-06 52.2 6.8 93 634-748 44-158 (166)
144 PLN02919 haloacid dehalogenase 95.2 0.06 1.3E-06 66.8 9.3 130 633-781 162-294 (1057)
145 COG2179 Predicted hydrolase of 95.1 0.098 2.1E-06 48.3 7.8 85 632-747 46-133 (175)
146 PRK05446 imidazole glycerol-ph 95.1 0.06 1.3E-06 57.7 7.5 99 632-749 30-145 (354)
147 PF06888 Put_Phosphatase: Puta 95.1 0.02 4.4E-07 57.4 3.7 104 632-740 71-184 (234)
148 PRK09456 ?-D-glucose-1-phospha 95.0 0.074 1.6E-06 52.6 7.7 92 632-749 84-182 (199)
149 TIGR01458 HAD-SF-IIA-hyp3 HAD- 94.8 0.25 5.4E-06 51.0 11.0 48 625-672 10-64 (257)
150 KOG3120 Predicted haloacid deh 94.8 0.022 4.9E-07 54.7 2.9 120 632-756 84-214 (256)
151 TIGR00685 T6PP trehalose-phosp 94.7 0.041 8.8E-07 56.4 5.1 70 704-778 158-239 (244)
152 TIGR02247 HAD-1A3-hyp Epoxide 94.7 0.039 8.5E-07 55.1 4.7 91 632-748 94-192 (211)
153 PRK10563 6-phosphogluconate ph 94.4 0.041 8.9E-07 55.5 4.3 97 632-750 88-184 (221)
154 TIGR01686 FkbH FkbH-like domai 94.4 0.12 2.6E-06 55.3 8.0 93 632-751 31-129 (320)
155 PF09419 PGP_phosphatase: Mito 94.4 0.21 4.5E-06 47.2 8.5 89 630-748 57-161 (168)
156 PRK10444 UMP phosphatase; Prov 94.1 0.25 5.4E-06 50.6 9.1 47 625-671 10-59 (248)
157 PF13344 Hydrolase_6: Haloacid 93.9 0.092 2E-06 45.4 4.7 48 625-672 7-57 (101)
158 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.8 0.39 8.5E-06 49.3 10.0 49 625-673 10-61 (249)
159 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.8 0.14 3E-06 52.4 6.7 48 625-672 17-66 (242)
160 TIGR01993 Pyr-5-nucltdase pyri 93.3 0.32 6.9E-06 47.3 8.0 98 632-748 84-181 (184)
161 PLN02645 phosphoglycolate phos 93.2 0.2 4.4E-06 53.3 7.0 48 625-672 37-87 (311)
162 PRK10725 fructose-1-P/6-phosph 92.8 0.2 4.3E-06 48.9 5.8 90 638-748 93-182 (188)
163 PLN02580 trehalose-phosphatase 92.3 0.22 4.8E-06 53.7 5.7 62 712-778 300-373 (384)
164 COG0637 Predicted phosphatase/ 91.4 0.47 1E-05 47.7 6.6 99 631-749 85-183 (221)
165 PLN03017 trehalose-phosphatase 91.4 3.6 7.7E-05 44.2 13.4 47 620-667 119-167 (366)
166 PHA02597 30.2 hypothetical pro 90.8 0.7 1.5E-05 45.5 7.2 93 632-749 74-171 (197)
167 PLN02423 phosphomannomutase 90.6 0.37 8E-06 49.3 5.1 40 711-751 187-231 (245)
168 PF03767 Acid_phosphat_B: HAD 90.1 0.57 1.2E-05 47.3 5.8 82 632-740 115-207 (229)
169 PF08235 LNS2: LNS2 (Lipin/Ned 90.0 1.8 3.8E-05 40.4 8.4 103 631-747 26-141 (157)
170 KOG3040 Predicted sugar phosph 89.8 2 4.4E-05 41.2 8.7 51 622-672 13-66 (262)
171 COG3700 AphA Acid phosphatase 89.1 1.2 2.6E-05 41.4 6.5 83 633-746 115-205 (237)
172 COG1011 Predicted hydrolase (H 88.9 1.5 3.3E-05 44.2 8.0 90 631-747 98-194 (229)
173 TIGR01680 Veg_Stor_Prot vegeta 88.6 3.1 6.8E-05 42.5 9.7 43 630-672 143-188 (275)
174 PRK10748 flavin mononucleotide 87.2 1.3 2.8E-05 45.1 6.3 88 632-751 113-207 (238)
175 COG0241 HisB Histidinol phosph 87.1 3.5 7.6E-05 39.5 8.6 97 633-747 32-144 (181)
176 PF02358 Trehalose_PPase: Treh 86.5 5.1 0.00011 40.6 10.2 66 703-768 155-233 (235)
177 PLN02177 glycerol-3-phosphate 85.3 4.1 8.9E-05 46.1 9.4 97 633-752 111-215 (497)
178 TIGR01452 PGP_euk phosphoglyco 83.1 3.8 8.2E-05 42.9 7.6 48 625-672 11-61 (279)
179 TIGR01493 HAD-SF-IA-v2 Haloaci 82.0 1.7 3.8E-05 41.6 4.3 86 632-744 90-175 (175)
180 TIGR01684 viral_ppase viral ph 82.0 2.5 5.5E-05 43.6 5.5 41 633-673 146-187 (301)
181 TIGR02251 HIF-SF_euk Dullard-l 81.1 1.2 2.6E-05 42.3 2.7 94 632-748 42-135 (162)
182 TIGR01689 EcbF-BcbF capsule bi 80.5 2.4 5.3E-05 38.1 4.2 33 631-663 23-55 (126)
183 TIGR01663 PNK-3'Pase polynucle 78.4 3.1 6.7E-05 47.3 5.3 39 633-671 198-248 (526)
184 TIGR01657 P-ATPase-V P-type AT 77.8 1.2E+02 0.0026 38.4 19.4 39 632-671 784-824 (1054)
185 PHA03398 viral phosphatase sup 76.7 4.7 0.0001 41.7 5.5 40 634-673 150-189 (303)
186 PRK14010 potassium-transportin 76.5 68 0.0015 37.9 15.6 87 559-671 438-526 (673)
187 PLN02151 trehalose-phosphatase 76.4 40 0.00088 36.2 12.6 62 712-778 268-341 (354)
188 COG2503 Predicted secreted aci 76.2 13 0.00029 36.9 8.1 86 633-744 123-212 (274)
189 PF05822 UMPH-1: Pyrimidine 5' 74.7 8.4 0.00018 38.9 6.5 133 632-778 90-241 (246)
190 TIGR02244 HAD-IG-Ncltidse HAD 74.3 11 0.00024 40.3 7.8 107 634-747 186-318 (343)
191 PTZ00445 p36-lilke protein; Pr 73.4 36 0.00078 33.5 10.2 104 632-747 75-200 (219)
192 PF13242 Hydrolase_like: HAD-h 67.3 9.6 0.00021 30.6 4.3 58 711-768 7-71 (75)
193 COG1877 OtsB Trehalose-6-phosp 66.9 20 0.00043 36.9 7.4 50 622-671 30-80 (266)
194 COG0647 NagD Predicted sugar p 66.8 7.8 0.00017 39.9 4.5 46 623-668 15-60 (269)
195 COG0474 MgtA Cation transport 66.8 1.2E+02 0.0027 37.6 15.6 200 24-254 40-249 (917)
196 TIGR01647 ATPase-IIIA_H plasma 65.5 1.4E+02 0.003 36.2 15.5 96 69-179 28-133 (755)
197 PF00389 2-Hacid_dh: D-isomer 65.0 75 0.0016 28.7 10.4 80 705-792 42-123 (133)
198 TIGR01460 HAD-SF-IIA Haloacid 62.9 31 0.00068 34.9 8.1 48 625-672 7-58 (236)
199 TIGR01459 HAD-SF-IIA-hyp4 HAD- 62.9 11 0.00025 38.3 5.0 96 634-748 140-237 (242)
200 TIGR01452 PGP_euk phosphoglyco 58.6 13 0.00029 38.8 4.7 110 620-748 133-243 (279)
201 TIGR01517 ATPase-IIB_Ca plasma 58.3 1.8E+02 0.0038 36.4 15.0 139 26-179 56-207 (941)
202 TIGR01524 ATPase-IIIB_Mg magne 55.7 3.3E+02 0.0072 33.6 16.6 137 27-192 32-184 (867)
203 PRK10517 magnesium-transportin 55.4 4.7E+02 0.01 32.5 17.7 27 559-585 547-573 (902)
204 PF03120 DNA_ligase_OB: NAD-de 55.1 7.2 0.00016 31.9 1.5 27 163-189 44-71 (82)
205 PRK14194 bifunctional 5,10-met 54.3 58 0.0012 34.2 8.3 62 706-767 138-208 (301)
206 TIGR01106 ATPase-IIC_X-K sodiu 54.0 3.4E+02 0.0074 34.1 16.5 150 26-191 34-193 (997)
207 KOG3085 Predicted hydrolase (H 53.3 37 0.0008 34.2 6.4 106 633-760 114-221 (237)
208 TIGR01456 CECR5 HAD-superfamil 52.9 52 0.0011 35.1 8.1 49 624-672 8-64 (321)
209 PF14336 DUF4392: Domain of un 46.9 1.2E+02 0.0025 31.9 9.3 39 634-672 62-101 (291)
210 KOG2914 Predicted haloacid-hal 45.9 66 0.0014 32.1 6.9 116 633-767 93-213 (222)
211 PRK15122 magnesium-transportin 44.4 7.2E+02 0.016 30.9 18.4 147 27-191 44-206 (903)
212 PLN02423 phosphomannomutase 44.2 35 0.00076 34.8 4.9 31 632-663 24-54 (245)
213 TIGR01522 ATPase-IIA2_Ca golgi 43.3 7.2E+02 0.016 30.9 16.9 70 119-191 90-169 (884)
214 KOG3128 Uncharacterized conser 41.5 1.2E+02 0.0027 30.5 7.7 140 633-778 139-290 (298)
215 PF12689 Acid_PPase: Acid Phos 41.4 38 0.00082 32.3 4.2 40 633-672 46-86 (169)
216 PF13380 CoA_binding_2: CoA bi 41.3 41 0.00088 29.8 4.2 40 633-672 64-104 (116)
217 PF00122 E1-E2_ATPase: E1-E2 A 41.3 3.1E+02 0.0067 27.3 11.4 170 169-359 39-212 (230)
218 PF12368 DUF3650: Protein of u 40.6 24 0.00051 22.3 1.7 15 43-57 13-27 (28)
219 PF15584 Imm44: Immunity prote 39.0 14 0.0003 30.6 0.8 19 171-189 13-31 (94)
220 PRK14169 bifunctional 5,10-met 38.8 1.9E+02 0.0042 30.0 9.2 62 706-767 135-205 (282)
221 COG5547 Small integral membran 38.5 1.7E+02 0.0037 22.0 6.2 20 116-135 32-51 (62)
222 PLN03063 alpha,alpha-trehalose 38.5 5.4E+02 0.012 31.5 14.4 38 633-670 533-571 (797)
223 PF12710 HAD: haloacid dehalog 36.5 16 0.00036 35.3 1.1 14 380-393 1-14 (192)
224 TIGR02250 FCP1_euk FCP1-like p 35.3 52 0.0011 30.9 4.1 40 632-672 58-97 (156)
225 KOG2882 p-Nitrophenyl phosphat 35.1 51 0.0011 34.1 4.2 48 625-672 31-81 (306)
226 PF05761 5_nucleotid: 5' nucle 34.9 28 0.00061 38.8 2.7 108 634-744 185-315 (448)
227 PRK11557 putative DNA-binding 34.7 3E+02 0.0064 28.5 10.3 110 635-751 116-227 (278)
228 PRK14170 bifunctional 5,10-met 34.5 2.3E+02 0.005 29.5 9.0 44 629-672 10-62 (284)
229 TIGR01116 ATPase-IIA1_Ca sarco 34.2 9.9E+02 0.021 29.8 16.1 29 559-587 534-562 (917)
230 PLN02645 phosphoglycolate phos 34.2 67 0.0015 34.1 5.3 67 709-777 231-306 (311)
231 cd00860 ThrRS_anticodon ThrRS 34.2 1E+02 0.0022 25.3 5.5 47 626-672 6-53 (91)
232 TIGR00216 ispH_lytB (E)-4-hydr 33.6 3.1E+02 0.0067 28.5 9.7 155 565-756 100-266 (280)
233 PF11019 DUF2608: Protein of u 33.4 1.2E+02 0.0025 31.2 6.6 103 633-742 82-195 (252)
234 PF11694 DUF3290: Protein of u 32.8 4.1E+02 0.0089 24.7 9.8 17 162-178 99-115 (149)
235 PRK14172 bifunctional 5,10-met 31.0 3.3E+02 0.0071 28.3 9.4 63 706-768 137-208 (278)
236 PRK08433 flagellar motor switc 30.4 31 0.00066 30.2 1.6 42 139-186 21-62 (111)
237 PF06506 PrpR_N: Propionate ca 30.4 2.8E+02 0.006 26.5 8.5 108 635-790 64-172 (176)
238 PRK14184 bifunctional 5,10-met 30.1 2.9E+02 0.0062 28.9 8.8 62 706-768 136-211 (286)
239 PF01455 HupF_HypC: HupF/HypC 30.1 72 0.0016 25.2 3.5 31 150-181 17-50 (68)
240 cd05017 SIS_PGI_PMI_1 The memb 28.9 1.1E+02 0.0024 27.0 5.0 37 633-671 55-91 (119)
241 CHL00200 trpA tryptophan synth 28.3 4.7E+02 0.01 27.0 10.1 40 712-751 188-231 (263)
242 TIGR01494 ATPase_P-type ATPase 28.2 7.6E+02 0.016 28.1 13.0 151 156-356 53-213 (499)
243 COG1188 Ribosome-associated he 27.9 54 0.0012 27.9 2.5 30 152-183 34-63 (100)
244 KOG0207 Cation transport ATPas 27.8 4E+02 0.0086 32.4 10.3 40 168-214 374-416 (951)
245 PRK01045 ispH 4-hydroxy-3-meth 27.7 3.1E+02 0.0068 28.8 8.7 156 565-756 100-268 (298)
246 PF09926 DUF2158: Uncharacteri 27.0 41 0.00088 25.0 1.5 13 170-182 2-14 (53)
247 PRK11479 hypothetical protein; 26.9 27 0.00059 35.9 0.8 22 162-183 58-79 (274)
248 PF09925 DUF2157: Predicted me 26.9 4.2E+02 0.009 24.4 8.7 17 44-60 7-24 (145)
249 PRK04980 hypothetical protein; 26.8 1.1E+02 0.0024 26.3 4.3 37 150-192 19-57 (102)
250 cd02071 MM_CoA_mut_B12_BD meth 26.7 1.8E+02 0.0039 25.8 6.0 54 619-672 49-104 (122)
251 PRK10671 copA copper exporting 26.3 7.9E+02 0.017 30.2 13.4 36 171-207 330-365 (834)
252 PRK14186 bifunctional 5,10-met 26.2 4.1E+02 0.0088 28.0 9.2 62 706-767 137-207 (297)
253 PF03129 HGTP_anticodon: Antic 25.3 1.7E+02 0.0036 24.3 5.3 48 625-672 3-54 (94)
254 cd05013 SIS_RpiR RpiR-like pro 24.6 4.9E+02 0.011 22.9 9.7 109 636-751 2-112 (139)
255 PRK14193 bifunctional 5,10-met 24.4 3.9E+02 0.0084 27.9 8.6 61 707-767 138-209 (284)
256 COG4988 CydD ABC-type transpor 24.1 6.3E+02 0.014 29.0 10.7 38 112-149 139-180 (559)
257 PF11431 Transport_MerF: Membr 23.8 2.8E+02 0.0061 19.9 5.0 20 82-101 2-21 (46)
258 PF13275 S4_2: S4 domain; PDB: 23.8 41 0.00089 26.2 1.1 23 154-177 35-57 (65)
259 PRK14191 bifunctional 5,10-met 23.7 5E+02 0.011 27.1 9.2 62 706-768 136-207 (285)
260 PRK11507 ribosome-associated p 23.6 71 0.0015 25.3 2.3 26 153-179 38-63 (70)
261 PRK14179 bifunctional 5,10-met 23.4 7.3E+02 0.016 25.9 10.4 62 706-767 137-207 (284)
262 PRK14177 bifunctional 5,10-met 22.3 5.8E+02 0.013 26.6 9.4 62 706-767 138-208 (284)
263 PF04273 DUF442: Putative phos 21.9 2.5E+02 0.0054 24.6 5.7 36 638-673 17-60 (110)
264 cd00859 HisRS_anticodon HisRS 21.9 2E+02 0.0043 23.2 5.1 46 626-671 6-52 (91)
265 TIGR03127 RuMP_HxlB 6-phospho 21.5 7E+02 0.015 23.6 9.6 105 635-751 18-124 (179)
266 PRK14174 bifunctional 5,10-met 21.4 9.6E+02 0.021 25.2 11.8 63 706-768 138-213 (295)
267 PRK15482 transcriptional regul 21.2 8.4E+02 0.018 25.2 10.8 110 635-751 123-234 (285)
268 PRK14183 bifunctional 5,10-met 21.1 5.1E+02 0.011 27.0 8.6 63 706-768 136-207 (281)
269 cd01137 PsaA Metal binding pro 21.1 2.4E+02 0.0053 29.5 6.6 54 619-672 194-251 (287)
270 cd05014 SIS_Kpsf KpsF-like pro 20.8 84 0.0018 27.9 2.7 34 633-666 59-92 (128)
271 PRK11543 gutQ D-arabinose 5-ph 20.7 6.3E+02 0.014 26.7 9.9 113 632-751 26-141 (321)
272 cd01017 AdcA Metal binding pro 20.7 2.5E+02 0.0053 29.3 6.6 54 619-672 188-245 (282)
273 PRK14189 bifunctional 5,10-met 20.6 9.8E+02 0.021 25.0 13.7 62 706-767 137-207 (285)
274 PRK14175 bifunctional 5,10-met 20.5 3.7E+02 0.0081 28.1 7.6 44 629-672 11-63 (286)
275 TIGR00640 acid_CoA_mut_C methy 20.5 2.8E+02 0.006 25.2 6.0 74 617-720 50-125 (132)
276 PRK04017 hypothetical protein; 20.4 1.8E+02 0.004 26.3 4.6 32 715-746 10-42 (132)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-141 Score=1146.65 Aligned_cols=752 Identities=53% Similarity=0.784 Sum_probs=676.3
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCC
Q 003468 24 FPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGE 103 (817)
Q Consensus 24 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 103 (817)
.++|..+++|++..|+||+.+|||.+|+.+|+++||+|+++.....++|+++++||.++++.+|+++|++||++.+
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~---- 77 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD---- 77 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh----
Confidence 5678899999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcc
Q 003468 104 EGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKV 183 (817)
Q Consensus 104 ~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~i 183 (817)
|.++++|.+++++++.+++||||+++|++++|+++.|+.++|+|+|+. ..++++||||||||.|+-||+|
T Consensus 78 ---------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~-~~i~A~eLVPGDiV~l~vGDkV 147 (972)
T KOG0202|consen 78 ---------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKL-QHILARELVPGDIVELKVGDKI 147 (972)
T ss_pred ---------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcc-cceehhccCCCCEEEEecCCcc
Confidence 557888999999999999999999999999999999999999999987 9999999999999999999999
Q ss_pred cccEEEEeecCCeEEEeecCCCCCccccccccccCC--CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhH
Q 003468 184 PADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP--ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQ 261 (817)
Q Consensus 184 PaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~--~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 261 (817)
|||.||++. -++.||||+|||||.||.|.....+ ++.+..+++|++|+||.|..|.++|+|+.||.+|.+|++.++
T Consensus 148 PADlRl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~ 225 (972)
T KOG0202|consen 148 PADLRLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKM 225 (972)
T ss_pred ccceeEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHH
Confidence 999999984 4599999999999999999887765 677889999999999999999999999999999999999999
Q ss_pred hhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccC
Q 003468 262 IHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPE 341 (817)
Q Consensus 262 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~ 341 (817)
++.. +++++|||++++.+...++.++.++++.+|++.+.++.+....+.| +....++|.+++++.++++|+
T Consensus 226 m~~~--e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~-------fk~~~~~f~IaVsLAVAAIPE 296 (972)
T KOG0202|consen 226 MQAT--ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSW-------FKGALYYFKIAVSLAVAAIPE 296 (972)
T ss_pred Hhcc--CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccc-------hhchhhhhhHHHHHHHHhccC
Confidence 9988 8889999999999999999889999999998876655433222224 666788999999999999999
Q ss_pred chHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCC
Q 003468 342 GLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPS 421 (817)
Q Consensus 342 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (817)
|||+.+++++++|.+||+|++++||+++++|+||++++||+|||||||+|+|++.++|+.+.......++...+..|++.
T Consensus 297 GLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~ 376 (972)
T KOG0202|consen 297 GLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPE 376 (972)
T ss_pred CCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988777778888899999998
Q ss_pred CCcccCCCC----CCCCHHHHHHHHHHhHhcCCeeeecC-CeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhh
Q 003468 422 DGRIEGWPV----GRMDANLQTIAKISAVCNDAGVEQSG-NHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLR 496 (817)
Q Consensus 422 ~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 496 (817)
+....+... ......+..++.++++||++.+++.. +.|...|.|+|.||..+++++|+........ ++.....
T Consensus 377 g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~--s~~~~~~ 454 (972)
T KOG0202|consen 377 GEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNL--SNEEASA 454 (972)
T ss_pred CceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcc--ccccccc
Confidence 776655532 23567788999999999999888654 6788899999999999999999876431111 1111235
Q ss_pred hhhhccccccceEeeccCCCCceEEEEEeecCCc--EEEEEeCcchHHHhccccccccCC-ceeecCHHHHHHHHHHHHH
Q 003468 497 CCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGN--KKLLVKGAVENLLERSSFVQLLDG-SVVELDQYSRDLILQSLQE 573 (817)
Q Consensus 497 ~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~--~~~~~KGa~e~il~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 573 (817)
|+..+...++...++||+|+||+|||.+.+..++ +.+|+|||+|.|+++|+.+...+| ..+|+++..|+.+.+...+
T Consensus 455 c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~ 534 (972)
T KOG0202|consen 455 CNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYE 534 (972)
T ss_pred chhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHH
Confidence 6666777778889999999999999999876654 799999999999999988887776 5599999999999999999
Q ss_pred HHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEE
Q 003468 574 MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMV 653 (817)
Q Consensus 574 ~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~ 653 (817)
|+++|+|||++|+++.+. ..+.+..+.+..++..+|+||+|+|++++.||||++++++|+.|+++||+|+|
T Consensus 535 ~g~~gLRvLalA~~~~~~---------~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~m 605 (972)
T KOG0202|consen 535 MGSEGLRVLALASKDSPG---------QVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIM 605 (972)
T ss_pred HhhccceEEEEEccCCcc---------cChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEE
Confidence 999999999999997653 12233445566778889999999999999999999999999999999999999
Q ss_pred ECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcC
Q 003468 654 ITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGD 733 (817)
Q Consensus 654 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GD 733 (817)
+|||+..||.+||+++|+...++++....++|.+++++..+..........+|+|++|.+|.++|+.||++|+.|+|+||
T Consensus 606 ITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGD 685 (972)
T KOG0202|consen 606 ITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGD 685 (972)
T ss_pred EcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCC
Confidence 99999999999999999999888888899999999999444333333478899999999999999999999999999999
Q ss_pred CccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 734 GVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 734 g~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
|.||+|+||.||||||||.+|+++||+|||+|+.||||++|+.++++||.+|+||++|+.|+++.|++.+...++...
T Consensus 686 GVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa 763 (972)
T KOG0202|consen 686 GVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAA 763 (972)
T ss_pred CccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888777654
No 2
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-124 Score=1012.30 Aligned_cols=715 Identities=34% Similarity=0.488 Sum_probs=610.9
Q ss_pred CCHHHHHHHhCCCCCCCCCH--HHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003468 29 KDVEECEEKYGVNPKIGLSV--GEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGG 106 (817)
Q Consensus 29 ~~~~~~~~~l~~~~~~GL~~--~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 106 (817)
-++++++++|+|||..||+. +|..+|++.||.|.+|++++++||+++|+.|.+...++|.++|++++.++++... .
T Consensus 101 gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g--~ 178 (1034)
T KOG0204|consen 101 GGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPG--I 178 (1034)
T ss_pred cCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCC--C
Confidence 36999999999999999986 8899999999999999999999999999999999999999999999999988652 2
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcc-cceEEecCCccceeeecCCccCCcEEEecCCCcccc
Q 003468 107 EMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQS-EQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPA 185 (817)
Q Consensus 107 ~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~-~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPa 185 (817)
+ ..|++++.|++.+++..++....+|+.++++++|++... .++.|+|+|+. ++|+..|||||||+.|+.||.+||
T Consensus 179 ~---~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r-~~isI~diVVGDIv~lk~GDqvPA 254 (1034)
T KOG0204|consen 179 E---DGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRR-QQISIYDLVVGDIVQLKIGDQVPA 254 (1034)
T ss_pred C---cccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEE-EEEEEeeeeeccEEEeecCCcccc
Confidence 2 379999999999888889999999999999999986543 48999999998 999999999999999999999999
Q ss_pred cEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhh
Q 003468 186 DMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEA 265 (817)
Q Consensus 186 D~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 265 (817)
||++++ +.++.+|||++||||+++.|... .++++++||++.+|+++++|+++|.+|..|+++..+...
T Consensus 255 DGvli~--gn~L~iDESSlTGESd~v~k~~~----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 255 DGVLIQ--GNSLKIDESSLTGESDHVQKSLD----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred ceEEEe--ccceeEecccccCCCcceeccCC----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 999997 57899999999999999999864 357999999999999999999999999999999998887
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCC-CC--cccccchhhHHHHHHHHHHHHhhhccCc
Q 003468 266 SQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDG-WP--RNFKFSFEKCTYYFEIAVALAVAAIPEG 342 (817)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~i~llv~~iP~~ 342 (817)
..+++|+|-++++++..+..+.++++++++++.+..|....+..+ -+ .......+.+..+|.+++.++++++|+|
T Consensus 323 --~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEG 400 (1034)
T KOG0204|consen 323 --GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEG 400 (1034)
T ss_pred --CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCC
Confidence 668999999999999999998888888887776655432221111 10 1111225667788889999999999999
Q ss_pred hHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCC
Q 003468 343 LPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSD 422 (817)
Q Consensus 343 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (817)
||+++++++++++++|.+++.+||++++||++|+.++||+|||||||+|+|+|.+.|+.+..+. .+. +.
T Consensus 401 LPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k------~~~----~~- 469 (1034)
T KOG0204|consen 401 LPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYK------VNS----PK- 469 (1034)
T ss_pred ccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccc------ccC----cc-
Confidence 9999999999999999999999999999999999999999999999999999999998764322 110 00
Q ss_pred CcccCCCCCCCCHHHHH-HHHHHhHhcCCeee-ecC--CeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhh
Q 003468 423 GRIEGWPVGRMDANLQT-IAKISAVCNDAGVE-QSG--NHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCC 498 (817)
Q Consensus 423 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~-~~~--~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 498 (817)
. ...++.+.. +....+...+..+. ++. ..++..|+|+|.||+.+...+|.+.+.
T Consensus 470 --~-----~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~--------------- 527 (1034)
T KOG0204|consen 470 --S-----SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD--------------- 527 (1034)
T ss_pred --c-----ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh---------------
Confidence 0 012333333 33333333333332 232 378889999999999999999875432
Q ss_pred hhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhh
Q 003468 499 QLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTA 578 (817)
Q Consensus 499 ~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 578 (817)
.+....+++.+||+|.||+|+++++.+++..++++|||+|.++..|+++...+|+..++++..+..+.+.++.|+++|
T Consensus 528 --~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~ 605 (1034)
T KOG0204|consen 528 --VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEG 605 (1034)
T ss_pred --hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhh
Confidence 123456789999999999999999977776349999999999999999999999999999999999999999999999
Q ss_pred hceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCC
Q 003468 579 LRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDN 658 (817)
Q Consensus 579 ~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~ 658 (817)
+|++++|||++..... .+.+..+.+..+.+|+++|+++++||+||+++++|+.|+++||.|.|+||||
T Consensus 606 LRti~lAy~df~~~~~------------~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDN 673 (1034)
T KOG0204|consen 606 LRTICLAYRDFVAGPD------------EEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDN 673 (1034)
T ss_pred hheeeEEeeccccCCC------------CCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCc
Confidence 9999999998654300 0111222345678999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCH
Q 003468 659 KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDA 738 (817)
Q Consensus 659 ~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~ 738 (817)
..||++||.+|||..++.+ ...++|.+|.++.++...-..++-.|+||.+|.+|..+|+.+++.|++|+++|||.||+
T Consensus 674 I~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDa 751 (1034)
T KOG0204|consen 674 INTAKAIARECGILTPGGD--FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDA 751 (1034)
T ss_pred HHHHHHHHHHcccccCCCc--cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCc
Confidence 9999999999999987665 57889999998844333333347789999999999999999999999999999999999
Q ss_pred HHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 739 PALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 739 ~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
|||+.||||.|||++|+|+|||+||+|++||||++|+++++|||+.|.||+||+||+++.|+..++..|.+...
T Consensus 752 PALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~ 825 (1034)
T KOG0204|consen 752 PALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACA 825 (1034)
T ss_pred hhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999887776665543
No 3
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=4.8e-120 Score=1084.04 Aligned_cols=744 Identities=32% Similarity=0.504 Sum_probs=606.5
Q ss_pred ccccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 003468 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWY 100 (817)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 100 (817)
.+..+||..+++++++.|+|++..|||++||++|+++||+|+++.++++++|+++++||+++++++|+++++++++++
T Consensus 2 ~~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-- 79 (1053)
T TIGR01523 2 AEFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-- 79 (1053)
T ss_pred CCCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--
Confidence 345789999999999999999889999999999999999999999888999999999999999999999999999864
Q ss_pred cCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCC
Q 003468 101 DGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVG 180 (817)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G 180 (817)
.|.++++|+++++++++++++||+++++++++|+++.+++++|+|||++ ++|+++||||||||.|++|
T Consensus 80 -----------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~-~~I~a~eLVpGDIv~L~~G 147 (1053)
T TIGR01523 80 -----------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKS-DAIDSHDLVPGDICLLKTG 147 (1053)
T ss_pred -----------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCee-eecCHhhCCCCCEEEECCC
Confidence 6889999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred CcccccEEEEeecCCeEEEeecCCCCCccccccccccCC---CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhh
Q 003468 181 DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP---ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGK 257 (817)
Q Consensus 181 ~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~---~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~ 257 (817)
|+||||++|++ ++++.||||+|||||.||.|.+.... ++.++.++.|++|+||.|.+|++.++|++||.+|.+|+
T Consensus 148 d~VPAD~rLi~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~Gk 225 (1053)
T TIGR01523 148 DTIPADLRLIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGA 225 (1053)
T ss_pred CEeeccEEEEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHH
Confidence 99999999998 57899999999999999999875432 33456678899999999999999999999999999999
Q ss_pred hHhHhhhhcc---C------------------------------CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003468 258 VHSQIHEASQ---N------------------------------EEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYF 304 (817)
Q Consensus 258 i~~~~~~~~~---~------------------------------~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 304 (817)
|++++..... + ..+||+|+++++++.++..++++++++++++...
T Consensus 226 Ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~-- 303 (1053)
T TIGR01523 226 IAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF-- 303 (1053)
T ss_pred HHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 9998865321 0 1249999999999998887777777666654211
Q ss_pred ccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCC
Q 003468 305 LTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDK 384 (817)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DK 384 (817)
..+ ...+.++++++++++|++||++++++++++++||++++++||+++++|+||++++||+||
T Consensus 304 ------~~~-----------~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDK 366 (1053)
T TIGR01523 304 ------DVD-----------KEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDK 366 (1053)
T ss_pred ------hhh-----------HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecC
Confidence 000 234557889999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCccEEEEEEEeCCcCCccceeeec--CCccCCCCCc---------------------c--------cC--CCCC
Q 003468 385 TGTLTTNQMAVTKLVAVGSRAGTLRSFNVQ--GTTYNPSDGR---------------------I--------EG--WPVG 431 (817)
Q Consensus 385 TGTLT~~~m~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------------------~--------~~--~~~~ 431 (817)
|||||+|+|+|.++|..+..+ +.+. +..|.+.... . .. .+..
T Consensus 367 TGTLT~N~M~V~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1053)
T TIGR01523 367 TGTITQGKMIARQIWIPRFGT-----ISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPED 441 (1053)
T ss_pred cCccccceEEEEEEEEcCCce-----EEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999998754110 0011 0111111000 0 00 0000
Q ss_pred CCCHHHHHHHHHHhHhcCCeeeec--CCeeEeCCChhHHHHHHHHHHcCCCCCCCCC--CC-CCch----hhh-hhhhhc
Q 003468 432 RMDANLQTIAKISAVCNDAGVEQS--GNHYVASGMPTEAALKVMVEKMGFPEGVNHG--SS-SSPE----DVL-RCCQLW 501 (817)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~--~~-~~~~----~~~-~~~~~~ 501 (817)
..+..+..++.++++||++.+... ++.+...|+|+|.||+.++.+.|+....... .. .... .+. ......
T Consensus 442 ~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1053)
T TIGR01523 442 IDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPG 521 (1053)
T ss_pred cccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccccccccccc
Confidence 012345668888899998876542 2345567999999999999988874210000 00 0000 000 000011
Q ss_pred cccccceEeeccCCCCceEEEEEeecCC-cEEEEEeCcchHHHhccccccccCC-ceeecCHHHHHHHHHHHHHHHHhhh
Q 003468 502 NTLEQRFATLEFDRDRKSMGVLVNSSSG-NKKLLVKGAVENLLERSSFVQLLDG-SVVELDQYSRDLILQSLQEMSSTAL 579 (817)
Q Consensus 502 ~~~~~~l~~~~F~s~~k~msvvv~~~~~-~~~~~~KGa~e~il~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~ 579 (817)
...+++++++||+|+||||+++++..++ .+++|+|||||.|+++|+.+...+| ...++++..++.+.+.+++|+++|+
T Consensus 522 ~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~Gl 601 (1053)
T TIGR01523 522 SAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGL 601 (1053)
T ss_pred ccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCC
Confidence 2356789999999999999999986544 4789999999999999997765454 5678999999999999999999999
Q ss_pred ceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCH
Q 003468 580 RCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNK 659 (817)
Q Consensus 580 r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~ 659 (817)
||+++|||++..+.. ... ....+...++.+|+||+|+|+++|+||+|++++++|+.|+++||+++|+|||++
T Consensus 602 RvLa~A~r~l~~~~~--~~~------~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~ 673 (1053)
T TIGR01523 602 RVLAFASKSFDKADN--NDD------QLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFP 673 (1053)
T ss_pred eEEEEEEEECCchhc--cch------hhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCH
Confidence 999999998754210 000 000001123457899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCc------cccccccChhHHHHHHH-HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEc
Q 003468 660 NTAEAICREIGVFGAHE------DISSQSITGKEFMDIHN-QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTG 732 (817)
Q Consensus 660 ~~a~~ia~~~gi~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~G 732 (817)
.||.++|+++|+...+. .....+++|.+++.+.+ +...+. ....||+|++|+||.++|+.+|+.|+.|+|+|
T Consensus 674 ~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~-~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~G 752 (1053)
T TIGR01523 674 ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK-ALCLVIARCAPQTKVKMIEALHRRKAFCAMTG 752 (1053)
T ss_pred HHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh-hcCeEEEecCHHHHHHHHHHHHhcCCeeEEeC
Confidence 99999999999975321 11235788999887732 222222 25679999999999999999999999999999
Q ss_pred CCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 733 DGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 733 Dg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
||.||+|||++||||||||.+|+++|+++||+++.+|+|++|+.++++||++|+||+|++.|.+++|+.++++++++.+.
T Consensus 753 DGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~ 832 (1053)
T TIGR01523 753 DGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAF 832 (1053)
T ss_pred CCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999988887765
Q ss_pred c
Q 003468 813 A 813 (817)
Q Consensus 813 ~ 813 (817)
.
T Consensus 833 ~ 833 (1053)
T TIGR01523 833 R 833 (1053)
T ss_pred h
Confidence 3
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-119 Score=1066.90 Aligned_cols=709 Identities=42% Similarity=0.604 Sum_probs=615.9
Q ss_pred CCccccccccccCCHH--HHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHH
Q 003468 17 ESSNEETFPAWAKDVE--ECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVS 94 (817)
Q Consensus 17 ~~~~~~~~~~~~~~~~--~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 94 (817)
.+.+.....||..+.+ ++...+.+++..||+.+|+.+|++.||+|+++..+..++|+.++.+|++++.++|+++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s 93 (917)
T COG0474 14 SSTPVTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLS 93 (917)
T ss_pred ccccCCcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556788999999 99999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcE
Q 003468 95 FVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDI 174 (817)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDI 174 (817)
+++..+... .....+|+++++++.+++++||+++++++++|++..+.+++|+|||++ ++|+++|||||||
T Consensus 94 ~~~~~~~~~---------~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~-~~i~a~eLVpGDi 163 (917)
T COG0474 94 AFVGDWVDA---------GVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKF-VEIPASELVPGDI 163 (917)
T ss_pred HHhhccccc---------CcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcE-EEecHHHCCCCcE
Confidence 988754210 034456777888899999999999999999999999999999999999 9999999999999
Q ss_pred EEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCC-CccceeeeCcEEeeCeEEEEEeeeCCc
Q 003468 175 VELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQ-GKKCMVFAGTTVVNGTCTCLVTNTGMN 252 (817)
Q Consensus 175 I~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~-~~~~~l~~Gt~v~~g~~~~~V~~tG~~ 252 (817)
|.|++||+||||++|+++ .+++||||+|||||.|+.|.+.+.. ++.+.. +++|++|+||.|.+|++.++|++||.+
T Consensus 164 V~l~~gd~vPAD~rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~ 241 (917)
T COG0474 164 VLLEAGDVVPADLRLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFE 241 (917)
T ss_pred EEECCCCccccceEEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCc
Confidence 999999999999999985 3379999999999999999987655 455565 889999999999999999999999999
Q ss_pred cchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHH
Q 003468 253 TEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAV 332 (817)
Q Consensus 253 T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 332 (817)
|.+|++++.+... ....+|+++.++++...+..++++++++++++.++... .+| ...|..++
T Consensus 242 T~~G~ia~~~~~~--~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-----~~~-----------~~~~~~~v 303 (917)
T COG0474 242 TEFGKIARLLPTK--KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-----NGL-----------LESFLTAL 303 (917)
T ss_pred cHHHHHHHhhccc--cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ccH-----------HHHHHHHH
Confidence 9999999998876 46789999999999999999888888888877633211 112 45688899
Q ss_pred HHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceee
Q 003468 333 ALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFN 412 (817)
Q Consensus 333 ~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~ 412 (817)
+++++++|++||+.+++++++++.+|+++++++|+++++|+||++++||||||||||+|+|+|.+++..+..
T Consensus 304 ~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~-------- 375 (917)
T COG0474 304 ALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG-------- 375 (917)
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCc--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999987410
Q ss_pred ecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCch
Q 003468 413 VQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPE 492 (817)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~ 492 (817)
...++ ........+..++..+++||+...... + ++..|||+|.||+.++++.|+.. .
T Consensus 376 ---~~~~~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~-~~~~gdptE~Al~~~a~~~~~~~-~--------- 432 (917)
T COG0474 376 ---KDIDD--------KDLKDSPALLRFLLAAALCNSVTPEKN-G-WYQAGDPTEGALVEFAEKLGFSL-D--------- 432 (917)
T ss_pred ---ccccc--------cccccchHHHHHHHHHHhcCccccccc-C-ceecCCccHHHHHHHHHhcCCcC-C---------
Confidence 00000 001123444567788889999887766 5 88899999999999999988632 0
Q ss_pred hhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHH
Q 003468 493 DVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQ 572 (817)
Q Consensus 493 ~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 572 (817)
...+...+++++++||+|+|||||++++..++++.+++|||||.|+++|++. ++..+++++.++.+.+..+
T Consensus 433 -----~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~ 503 (917)
T COG0474 433 -----LSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVK 503 (917)
T ss_pred -----HHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHH
Confidence 1123344578999999999999999999777779999999999999999976 7778899999999999999
Q ss_pred HHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEE
Q 003468 573 EMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVM 652 (817)
Q Consensus 573 ~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~ 652 (817)
+|+++||||+++|||..+... ..... +..|+||+|+|+++|+||||++++++|+.|+++||+++
T Consensus 504 ~la~~glRvla~A~k~~~~~~---------------~~~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 504 ELASEGLRVLAVAYKKLDRAE---------------KDDEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred HHHHHHHHHHHHHhccCCccc---------------ccchh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 999999999999999654311 00111 56799999999999999999999999999999999999
Q ss_pred EECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHH--hHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEE
Q 003468 653 VITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQ--KNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAM 730 (817)
Q Consensus 653 ~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~ 730 (817)
|+|||+..||++||++||+...... ..+++|.++..+.+. ...+. +..||||++|+||.++|+.+|+.|+.|+|
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~~~--~~vi~G~el~~l~~~el~~~~~--~~~VfARvsP~qK~~IV~~lq~~g~vVam 643 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEAES--ALVIDGAELDALSDEELAELVE--ELSVFARVSPEQKARIVEALQKSGHVVAM 643 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCCc--eeEeehHHhhhcCHHHHHHHhh--hCcEEEEcCHHHHHHHHHHHHhCCCEEEE
Confidence 9999999999999999998765322 458899999888332 33444 34499999999999999999999999999
Q ss_pred EcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhh
Q 003468 731 TGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNL 810 (817)
Q Consensus 731 ~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 810 (817)
+|||.||+||||+||||||||.+|+|++|++||+++.++++..++.+++|||++|.|++|++.|.+++|++..++++++.
T Consensus 644 tGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~ 723 (917)
T COG0474 644 TGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYS 723 (917)
T ss_pred eCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999998887
Q ss_pred ccccc
Q 003468 811 DKAIF 815 (817)
Q Consensus 811 ~~~~f 815 (817)
+...|
T Consensus 724 ~~~~~ 728 (917)
T COG0474 724 LFNLF 728 (917)
T ss_pred HHhcc
Confidence 77665
No 5
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.2e-115 Score=1048.54 Aligned_cols=729 Identities=30% Similarity=0.459 Sum_probs=603.5
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCC
Q 003468 24 FPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGE 103 (817)
Q Consensus 24 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 103 (817)
-+||..+++++++.|+|++.+|||++||++|+++||+|++++++++++|+.++++|+++++++++++++++++++.+...
T Consensus 15 ~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~ 94 (997)
T TIGR01106 15 MDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAS 94 (997)
T ss_pred CCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc
Confidence 47899999999999999999999999999999999999999888899999999999999999999999998876544211
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcc
Q 003468 104 EGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKV 183 (817)
Q Consensus 104 ~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~i 183 (817)
.+.......|++++++++++++++++++++|+|+++.+++++++.+.+++|+|+|++ ++|+++||||||+|.|++||+|
T Consensus 95 ~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~-~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 95 TEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK-MSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred cCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEeeHHHCCCCCEEEECCCCEE
Confidence 011112236888999999999999999999999999999999998999999999998 9999999999999999999999
Q ss_pred cccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhh
Q 003468 184 PADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIH 263 (817)
Q Consensus 184 PaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~ 263 (817)
||||+|++ ++.+.||||+|||||.|+.|.++.. ...+.+.+|++|+||.|++|++.++|++||.+|.+|++.+.+.
T Consensus 174 PaD~~il~--~~~l~VdeS~LTGES~pv~K~~~~~--~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 249 (997)
T TIGR01106 174 PADLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT--HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLAS 249 (997)
T ss_pred eeeEEEEE--ccCcEEEccccCCCCCceeccCCCc--ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhh
Confidence 99999997 3468999999999999999987632 2223467899999999999999999999999999999999887
Q ss_pred hhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCch
Q 003468 264 EASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGL 343 (817)
Q Consensus 264 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L 343 (817)
.. ..+++|+++.+++++..++.+++++++++++++.... ..| ...+.+++++++++|||+|
T Consensus 250 ~~--~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----------~~~~~~~i~v~v~~iP~~L 310 (997)
T TIGR01106 250 GL--ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG------YTW-----------LEAVIFLIGIIVANVPEGL 310 (997)
T ss_pred hc--ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCH-----------HHHHHHHHHHHhhcCCccc
Confidence 76 5678999999999999988887777776665543211 111 3356678889999999999
Q ss_pred HHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCC
Q 003468 344 PAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDG 423 (817)
Q Consensus 344 ~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (817)
|++++++++.++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+. ..+. +.+.+.
T Consensus 311 ~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~------~~~~-~~~~~~ 383 (997)
T TIGR01106 311 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE------ADTT-EDQSGV 383 (997)
T ss_pred hHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEe------cCCc-cCCCCc
Confidence 999999999999999999999999999999999999999999999999999999997653211 1110 011000
Q ss_pred cccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCC-----eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhh
Q 003468 424 RIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGN-----HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCC 498 (817)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 498 (817)
...........+..++++||++.+....+ ..+..|+|+|.||+.++.+.+...
T Consensus 384 -----~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~----------------- 441 (997)
T TIGR01106 384 -----SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV----------------- 441 (997)
T ss_pred -----cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH-----------------
Confidence 00011234456778889999876543211 234579999999999987644311
Q ss_pred hhccccccceEeeccCCCCceEEEEEeec---CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHH
Q 003468 499 QLWNTLEQRFATLEFDRDRKSMGVLVNSS---SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMS 575 (817)
Q Consensus 499 ~~~~~~~~~l~~~~F~s~~k~msvvv~~~---~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (817)
...+..+.+++.+||+|+||||++++... ++.+++|+|||||.|+++|+.+. .+|...+++++.++.+.+.+++|+
T Consensus 442 ~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a 520 (997)
T TIGR01106 442 MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELG 520 (997)
T ss_pred HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHH
Confidence 11234567789999999999999988642 24578999999999999999775 578888999999999999999999
Q ss_pred HhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEEC
Q 003468 576 STALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVIT 655 (817)
Q Consensus 576 ~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~T 655 (817)
++|+||+++|||.+..+.. .... .......+..|+||+|+|+++++||+|++++++|++|+++||+++|+|
T Consensus 521 ~~GlRvla~A~k~l~~~~~--~~~~-------~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~T 591 (997)
T TIGR01106 521 GLGERVLGFCHLYLPDEQF--PEGF-------QFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 591 (997)
T ss_pred hcCCEEEEEEEeecCcccc--cccc-------cccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEEC
Confidence 9999999999998754210 0000 000011123488999999999999999999999999999999999999
Q ss_pred CCCHhhHHHHHHHhCCCCCCcc--------------------ccccccChhHHHHHH--HHhHhhccCCceEEEecCccc
Q 003468 656 GDNKNTAEAICREIGVFGAHED--------------------ISSQSITGKEFMDIH--NQKNYLRQDGGLLFSRAEPRH 713 (817)
Q Consensus 656 Gd~~~~a~~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~r~~p~~ 713 (817)
||++.+|.++|+++|+...+.. -...+++|.+++.+. +....+......||||++|+|
T Consensus 592 Gd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeq 671 (997)
T TIGR01106 592 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQ 671 (997)
T ss_pred CCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHH
Confidence 9999999999999999754321 012478888888762 223333333456999999999
Q ss_pred HHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHH
Q 003468 714 KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIR 793 (817)
Q Consensus 714 K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 793 (817)
|.++|+.+|+.|+.|+|+|||.||+|||++||||||||++|++++|++||+++.+|+|+.|++++++||++|.|++++++
T Consensus 672 K~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~ 751 (997)
T TIGR01106 672 KLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIA 751 (997)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHhhhccccc
Q 003468 794 YGFCHLENHCLSLELNLDKAIF 815 (817)
Q Consensus 794 ~~~~~n~~~~~~~~~~~~~~~f 815 (817)
|.++.|+..+++.+++.+...|
T Consensus 752 ~~l~~ni~~~~~~~~~~~~~~~ 773 (997)
T TIGR01106 752 YTLTSNIPEITPFLIFIIANIP 773 (997)
T ss_pred HHHHhhHHHHHHHHHHHHHcCc
Confidence 9999999999999888776554
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.1e-113 Score=1016.88 Aligned_cols=671 Identities=29% Similarity=0.450 Sum_probs=576.0
Q ss_pred ccccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc
Q 003468 21 EETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWY 100 (817)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 100 (817)
+++...+..+.+++++.|++++ +|||++||++|+++||+|+++.++++++|+.++++|++|++++++++++++++++
T Consensus 44 ~~~~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-- 120 (902)
T PRK10517 44 ARCLKAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-- 120 (902)
T ss_pred HHHHHHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--
Confidence 3467778899999999999997 6999999999999999999999999999999999999999999999999988753
Q ss_pred cCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecC------CccceeeecCCccCCcE
Q 003468 101 DGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRD------GKKIPSLSAKELVPGDI 174 (817)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~------g~~~~~i~~~dLv~GDI 174 (817)
.|.++++|+++++++.+++++||+|+++++++|+++.+++++|+|+ |++ ++|+++|||||||
T Consensus 121 -----------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~-~~I~~~eLvpGDi 188 (902)
T PRK10517 121 -----------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGW-LEIPIDQLVPGDI 188 (902)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeE-EEEEHHhCCCCCE
Confidence 6778899999999999999999999999999999999999999999 567 8999999999999
Q ss_pred EEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCcc
Q 003468 175 VELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNT 253 (817)
Q Consensus 175 I~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T 253 (817)
|.|++||+|||||+|++ +..+.||||+|||||.||.|.+++.. +..++.+.+|++|+||.|.+|++.++|++||.+|
T Consensus 189 V~l~~Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T 266 (902)
T PRK10517 189 IKLAAGDMIPADLRILQ--ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANT 266 (902)
T ss_pred EEECCCCEEeeeEEEEE--cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEecccc
Confidence 99999999999999997 45689999999999999999987643 3345667889999999999999999999999999
Q ss_pred chhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHH
Q 003468 254 EIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVA 333 (817)
Q Consensus 254 ~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 333 (817)
.+|+|.+++.++ ..+++|+++.+++++.+++.++++++.++++++.... .+| ...+.++++
T Consensus 267 ~~GkI~~~v~~~--~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~------~~~-----------~~~l~~als 327 (902)
T PRK10517 267 WFGQLAGRVSEQ--DSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK------GDW-----------WEAALFALS 327 (902)
T ss_pred HHHHHHHHhhcc--CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc------CCH-----------HHHHHHHHH
Confidence 999999999887 6778999999999999888877777766665542211 112 345778899
Q ss_pred HHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeee
Q 003468 334 LAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNV 413 (817)
Q Consensus 334 llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~ 413 (817)
+++++|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.++....
T Consensus 328 v~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~----------- 396 (902)
T PRK10517 328 VAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS----------- 396 (902)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999998764210
Q ss_pred cCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchh
Q 003468 414 QGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPED 493 (817)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~ 493 (817)
+ ... ..++..+++|... + ...+||+|.|++.+++..+..
T Consensus 397 -~----------------~~~---~~ll~~a~l~~~~--~------~~~~~p~d~All~~a~~~~~~------------- 435 (902)
T PRK10517 397 -G----------------KTS---ERVLHSAWLNSHY--Q------TGLKNLLDTAVLEGVDEESAR------------- 435 (902)
T ss_pred -C----------------CCH---HHHHHHHHhcCCc--C------CCCCCHHHHHHHHHHHhcchh-------------
Confidence 0 001 1233333343321 1 114899999999987643210
Q ss_pred hhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHH
Q 003468 494 VLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQE 573 (817)
Q Consensus 494 ~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (817)
.....+.++.++||+|++|+|+++++..++...+++||+||.++++|+.+. .+|...+++++.++.+.+..++
T Consensus 436 ------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~ 508 (902)
T PRK10517 436 ------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDT 508 (902)
T ss_pred ------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHH
Confidence 011245677899999999999999987777788999999999999999775 4667788999888899999999
Q ss_pred HHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEE
Q 003468 574 MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMV 653 (817)
Q Consensus 574 ~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~ 653 (817)
++++|+|++++|||++..+... .. ...|+|++|+|+++|+||+||+++++|++|+++||+++|
T Consensus 509 ~a~~G~rvlavA~k~~~~~~~~----------------~~-~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~m 571 (902)
T PRK10517 509 LNRQGLRVVAVATKYLPAREGD----------------YQ-RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKI 571 (902)
T ss_pred HHhcCCEEEEEEEecCCccccc----------------cc-cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEE
Confidence 9999999999999976431100 00 112689999999999999999999999999999999999
Q ss_pred ECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHH--HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEE
Q 003468 654 ITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN--QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMT 731 (817)
Q Consensus 654 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~ 731 (817)
+|||++.||.++|+++||.. ..+++|.+++.+.+ ....+. +..+|+|++|+||.++|+.+|++|+.|+|+
T Consensus 572 iTGD~~~tA~~IA~~lGI~~------~~v~~G~el~~l~~~el~~~~~--~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~ 643 (902)
T PRK10517 572 LTGDSELVAAKVCHEVGLDA------GEVLIGSDIETLSDDELANLAE--RTTLFARLTPMHKERIVTLLKREGHVVGFM 643 (902)
T ss_pred EcCCCHHHHHHHHHHcCCCc------cCceeHHHHHhCCHHHHHHHHh--hCcEEEEcCHHHHHHHHHHHHHCCCEEEEE
Confidence 99999999999999999953 24678888887722 222333 567999999999999999999999999999
Q ss_pred cCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 732 GDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 732 GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
|||.||+|||++|||||||| +|+|+||++||+|+++|+|..|++++++||++|+||+|++.|.+++|+..+++++++.+
T Consensus 644 GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~ 722 (902)
T PRK10517 644 GDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASA 722 (902)
T ss_pred CCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999988877654
Q ss_pred c
Q 003468 812 K 812 (817)
Q Consensus 812 ~ 812 (817)
.
T Consensus 723 ~ 723 (902)
T PRK10517 723 F 723 (902)
T ss_pred H
Confidence 3
No 7
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.7e-113 Score=1017.34 Aligned_cols=695 Identities=27% Similarity=0.436 Sum_probs=582.7
Q ss_pred CCCCCCCCCCCc---ccc----ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHh
Q 003468 8 TGKRGNFDKESS---NEE----TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFN 80 (817)
Q Consensus 8 ~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~ 80 (817)
++-|+|+++.|+ ||| +...|..+++++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~ 80 (903)
T PRK15122 2 IKARRTNRKASEARKNHKKSMRIAREAANSLEETLANLNTHR-QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFN 80 (903)
T ss_pred chhhhhhhhhhhhhhccccchHHHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 345677777665 444 66778999999999999995 7999999999999999999999888899999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCC--
Q 003468 81 DTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDG-- 158 (817)
Q Consensus 81 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g-- 158 (817)
+|+.++|+++++++++++++.... ......|.++++|+++++++.+++++||+++++++++|+++.+.+++|+|+|
T Consensus 81 ~~~~~iL~~aa~ls~~~~~~~~~~--~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~ 158 (903)
T PRK15122 81 NPFIYVLMVLAAISFFTDYWLPLR--RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHA 158 (903)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcc--CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCcc
Confidence 999999999999999986542110 0112368899999999999999999999999999999999999999999995
Q ss_pred ----ccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCcccccccccc-----------CCCCCC
Q 003468 159 ----KKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKT-----------VPENSD 223 (817)
Q Consensus 159 ----~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~-----------~~~~~~ 223 (817)
++ ++|+++||||||+|.|++||+|||||+|++ +..+.||||+|||||.|+.|.+.+ ..+..+
T Consensus 159 ~~~g~~-~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~ 235 (903)
T PRK15122 159 GAEPVR-REIPMRELVPGDIVHLSAGDMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGS 235 (903)
T ss_pred CCCCeE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE--cCceEEEccccCCCCcceeeeccccccccccccccccccCC
Confidence 66 899999999999999999999999999997 456899999999999999998621 112344
Q ss_pred CCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003468 224 IQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKY 303 (817)
Q Consensus 224 ~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 303 (817)
+.+++|++|+||.|.+|++.++|++||.+|.+|+|.+++.. ...++|+++.++++...+..+..+++.+++++....
T Consensus 236 ~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~---~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~ 312 (903)
T PRK15122 236 LLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG---TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT 312 (903)
T ss_pred cccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 56778999999999999999999999999999999998866 345789999999998888776666655554443211
Q ss_pred hccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecC
Q 003468 304 FLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSD 383 (817)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~D 383 (817)
. .+| ...+.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||
T Consensus 313 ~------~~~-----------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~D 375 (903)
T PRK15122 313 K------GDW-----------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTD 375 (903)
T ss_pred c------CCH-----------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEec
Confidence 1 111 34567889999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCC
Q 003468 384 KTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASG 463 (817)
Q Consensus 384 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 463 (817)
||||||+|+|+|.+++..+. . ... .++..++++... + ...+
T Consensus 376 KTGTLT~~~m~V~~~~~~~~--------------~--------------~~~---~~l~~a~l~s~~--~------~~~~ 416 (903)
T PRK15122 376 KTGTLTQDRIILEHHLDVSG--------------R--------------KDE---RVLQLAWLNSFH--Q------SGMK 416 (903)
T ss_pred CCcccccCeEEEEEEEcCCC--------------C--------------ChH---HHHHHHHHhCCC--C------CCCC
Confidence 99999999999998764220 0 011 122333332211 1 1258
Q ss_pred ChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHH
Q 003468 464 MPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLL 543 (817)
Q Consensus 464 ~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il 543 (817)
||+|.|++.++.+.+... ....+..+.++||++.+|+|+++++..++++++++|||||.++
T Consensus 417 ~p~e~All~~a~~~~~~~-------------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il 477 (903)
T PRK15122 417 NLMDQAVVAFAEGNPEIV-------------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEML 477 (903)
T ss_pred ChHHHHHHHHHHHcCchh-------------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHH
Confidence 999999999988765311 0123457789999999999999998767788999999999999
Q ss_pred hccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEE
Q 003468 544 ERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVF 623 (817)
Q Consensus 544 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 623 (817)
++|++.. .+|...++++..++++.+..++++.+|+|++++|||++..+... ....+..|+||+|
T Consensus 478 ~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~---------------~~~~~~~e~~l~~ 541 (903)
T PRK15122 478 AVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR---------------AQYSTADERDLVI 541 (903)
T ss_pred Hhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccc---------------cccccccccCcEE
Confidence 9999764 46777889999999999999999999999999999976431100 0011224789999
Q ss_pred EEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHH--HhHhhccC
Q 003468 624 VGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN--QKNYLRQD 701 (817)
Q Consensus 624 lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 701 (817)
+|+++|+||+||+++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|.+++.+.+ ....+.
T Consensus 542 lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~-- 613 (903)
T PRK15122 542 RGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVE-- 613 (903)
T ss_pred EEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhh--
Confidence 99999999999999999999999999999999999999999999999953 24678888887722 223333
Q ss_pred CceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHh
Q 003468 702 GGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 702 ~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~g 781 (817)
+..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+|+||++||+|+++|+|+.|++++++|
T Consensus 614 ~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~g 692 (903)
T PRK15122 614 ERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKG 692 (903)
T ss_pred hCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHH
Confidence 56699999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 782 RSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 782 R~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
|++|+||+|++.|.++.|+..+++.+++.+
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~~~~~~~~~~ 722 (903)
T PRK15122 693 RETFGNIIKYLNMTASSNFGNVFSVLVASA 722 (903)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999999887766544
No 8
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.7e-112 Score=1019.94 Aligned_cols=708 Identities=33% Similarity=0.477 Sum_probs=583.9
Q ss_pred CCHHHHHHHhCCCCCCCCC--HHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003468 29 KDVEECEEKYGVNPKIGLS--VGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGG 106 (817)
Q Consensus 29 ~~~~~~~~~l~~~~~~GL~--~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 106 (817)
.+.+++++.|+||++.||| ++||++|+++||+|+++.++++++|++++++|+++++++|+++++++++++.+......
T Consensus 42 ~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~ 121 (941)
T TIGR01517 42 GGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGK 121 (941)
T ss_pred CCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhccccccc
Confidence 3799999999999999999 99999999999999999999999999999999999999999999999998754211112
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-cccceEEecCCccceeeecCCccCCcEEEecCCCcccc
Q 003468 107 EMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEI-QSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPA 185 (817)
Q Consensus 107 ~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPa 185 (817)
..+...|+++++++++++++.++++++|++++++++++++. .+.+++|+|||++ ++|+++||||||||.|++||+|||
T Consensus 122 ~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~-~~I~~~~Lv~GDiV~l~~Gd~IPa 200 (941)
T TIGR01517 122 ADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQE-QQISIHDIVVGDIVSLSTGDVVPA 200 (941)
T ss_pred CccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEE-EEEeHHHCCCCCEEEECCCCEecc
Confidence 23345789999999999999999999999999999999864 4668999999998 999999999999999999999999
Q ss_pred cEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhh
Q 003468 186 DMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEA 265 (817)
Q Consensus 186 D~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 265 (817)
||+|++ +..+.||||+|||||.|+.|.++ .+|++|+||.|.+|++.++|++||.+|.+|++.+++..+
T Consensus 201 D~~li~--g~~l~VdES~LTGES~pv~K~~~----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~ 268 (941)
T TIGR01517 201 DGVFIS--GLSLEIDESSITGESDPIKKGAP----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAE 268 (941)
T ss_pred cEEEEE--cCcEEEEecccCCCCCcccccCC----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccC
Confidence 999996 34899999999999999999875 247999999999999999999999999999999988765
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHH
Q 003468 266 SQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPA 345 (817)
Q Consensus 266 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~ 345 (817)
. .++|++++++++..++..+++++++++++++...+.......+.. ........+...+..++++++++|||+||+
T Consensus 269 --~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~al~llv~~iP~~Lp~ 344 (941)
T TIGR01517 269 --G-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR-DTEEDAQTFLDHFIIAVTIVVVAVPEGLPL 344 (941)
T ss_pred --C-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-ccchhhHHHHHHHHHHHHHHHhhCCCchHH
Confidence 3 567999999999999988777777666655432211000001100 000011234556788999999999999999
Q ss_pred HHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcc
Q 003468 346 VITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRI 425 (817)
Q Consensus 346 ~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (817)
+++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+. .++. .
T Consensus 345 ~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~------~~~~--------~ 410 (941)
T TIGR01517 345 AVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFN------VRDV--------L 410 (941)
T ss_pred HHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEe------cCcc--------c
Confidence 9999999999999999999999999999999999999999999999999999986542111 0000 0
Q ss_pred cCCCCCCCCHHHHHHHHHHhHhcCCeeee-c-CCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccc
Q 003468 426 EGWPVGRMDANLQTIAKISAVCNDAGVEQ-S-GNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNT 503 (817)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (817)
. ........++..++.||+..... . .+..+..|+|+|.|++.++...|.+.. ..+.
T Consensus 411 ~-----~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~-----------------~~~~ 468 (941)
T TIGR01517 411 R-----NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ-----------------EVRA 468 (941)
T ss_pred c-----cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-----------------HHHh
Confidence 0 01122334444445555443221 1 223356799999999999987764321 0122
Q ss_pred cccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceee
Q 003468 504 LEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLG 583 (817)
Q Consensus 504 ~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~ 583 (817)
.+++++.+||+|.||||+++++..++++++++|||||.++++|+.+...+|...++++ .++.+.+.+++++++|+|+++
T Consensus 469 ~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~ 547 (941)
T TIGR01517 469 EEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTIC 547 (941)
T ss_pred hchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEE
Confidence 3456788999999999999999776778999999999999999987656777778877 788899999999999999999
Q ss_pred eeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH
Q 003468 584 FAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE 663 (817)
Q Consensus 584 ~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 663 (817)
+||+++..+. + ...+..|+||+|+|+++|+||+|++++++|++|+++||+++|+|||++.||.
T Consensus 548 ~A~~~~~~~~--~---------------~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~ 610 (941)
T TIGR01517 548 LAYRDFAPEE--F---------------PRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAK 610 (941)
T ss_pred EEEEecCccc--c---------------ccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHH
Confidence 9999764310 0 0012247899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccccccccChhHHHHHH-H-HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHh
Q 003468 664 AICREIGVFGAHEDISSQSITGKEFMDIH-N-QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPAL 741 (817)
Q Consensus 664 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l 741 (817)
++|+++|+...+. .+++|++++.+. + ....+. +..+|||++|+||.++|+.+|+.|+.|+|+|||.||+|||
T Consensus 611 ~iA~~~GI~~~~~----~vi~G~~~~~l~~~el~~~i~--~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapAL 684 (941)
T TIGR01517 611 AIARNCGILTFGG----LAMEGKEFRRLVYEEMDPILP--KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPAL 684 (941)
T ss_pred HHHHHcCCCCCCc----eEeeHHHhhhCCHHHHHHHhc--cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHH
Confidence 9999999976432 478888888762 2 222332 5679999999999999999999999999999999999999
Q ss_pred hhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhccc
Q 003468 742 KLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDKA 813 (817)
Q Consensus 742 ~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~ 813 (817)
++||||||||.+|+|+|+++||+++++|+|+.|++++++||++|+||+|+++|.+++|+..++..+++.+..
T Consensus 685 k~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~ 756 (941)
T TIGR01517 685 KLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCIS 756 (941)
T ss_pred HhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988999999999999999999999999999999999999999999999999888877765443
No 9
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=7.5e-112 Score=1009.97 Aligned_cols=693 Identities=38% Similarity=0.599 Sum_probs=589.4
Q ss_pred cccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCccCCCCCCCHHHHHHHHH-hhHHHHHHHHHHHHHHHHhhcc
Q 003468 24 FPAWAKDVEECEEKYGVNPKIGLS-VGEVKKRREIYGYNELEKHEGTSIFQLILEQF-NDTLVRILLVAAVVSFVLAWYD 101 (817)
Q Consensus 24 ~~~~~~~~~~~~~~l~~~~~~GL~-~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~~~ 101 (817)
++||..+++++++.|+|++..||| ++|+++|+++||+|+++.++++++|+.++++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 789999999999999999999999 89999999999999999988899999999999 8999999999999998764
Q ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCC
Q 003468 102 GEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGD 181 (817)
Q Consensus 102 ~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~ 181 (817)
.|.++++++++++++..+++++|+++++.+++|+++.+.+++|+|||++ ++|+++||||||||.|++||
T Consensus 79 ----------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~-~~I~~~eLv~GDiv~l~~Gd 147 (884)
T TIGR01522 79 ----------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKL-EHVLASTLVPGDLVCLSVGD 147 (884)
T ss_pred ----------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEEEHHHCccCCEEEecCCC
Confidence 5778888888888899999999999999999999999999999999998 89999999999999999999
Q ss_pred cccccEEEEeecCCeEEEeecCCCCCccccccccccCCC--CCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhH
Q 003468 182 KVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPE--NSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVH 259 (817)
Q Consensus 182 ~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~--~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~ 259 (817)
+|||||+|++ +..+.||||+|||||.|+.|.+++.+. ..+..+++|++|+||.|.+|++.++|++||.+|.+|+|.
T Consensus 148 ~IPaDg~ii~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 148 RVPADLRIVE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred EEeeeEEEEE--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHH
Confidence 9999999997 346899999999999999999875431 234567789999999999999999999999999999999
Q ss_pred hHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhc
Q 003468 260 SQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAI 339 (817)
Q Consensus 260 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~i 339 (817)
++++.+ ...++|+++.+++++.++++++++++++++++.+... .+| ...+..++++++++|
T Consensus 226 ~~v~~~--~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~-----------~~~~~~~v~llv~ai 286 (884)
T TIGR01522 226 KMMQAI--EKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG------KDW-----------LEMFTISVSLAVAAI 286 (884)
T ss_pred HHhccC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCH-----------HHHHHHHHHHHHHHc
Confidence 999877 6678999999999999887766555544444432110 112 346778899999999
Q ss_pred cCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccC
Q 003468 340 PEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYN 419 (817)
Q Consensus 340 P~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 419 (817)
||+||++++++++.+++||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+.. .....++
T Consensus 287 P~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-----~~~~~~~ 361 (884)
T TIGR01522 287 PEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-----LNAVSLN 361 (884)
T ss_pred cchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-----ccCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999875421100 0111111
Q ss_pred CCCCccc-CC-CCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhh
Q 003468 420 PSDGRIE-GW-PVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRC 497 (817)
Q Consensus 420 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 497 (817)
+...... .. .....+.....++.++++||++..+..+++ ..|+|+|.|++.++++.|+..
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--~~g~p~e~All~~~~~~~~~~---------------- 423 (884)
T TIGR01522 362 QFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADT--LLGNPTDVALIELLMKFGLDD---------------- 423 (884)
T ss_pred CCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCC--cCCChHHHHHHHHHHHcCcHh----------------
Confidence 1111000 00 001123345667778889998866543333 358999999999998776521
Q ss_pred hhhccccccceEeeccCCCCceEEEEEeec-CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHH
Q 003468 498 CQLWNTLEQRFATLEFDRDRKSMGVLVNSS-SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSS 576 (817)
Q Consensus 498 ~~~~~~~~~~l~~~~F~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 576 (817)
.+..+..++++||+|.||||+++++.. ++++++++|||||.++.+|+.+...+|...+++++.++.+.+.++++++
T Consensus 424 ---~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~ 500 (884)
T TIGR01522 424 ---LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500 (884)
T ss_pred ---HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHh
Confidence 112356788999999999999998763 5678899999999999999987766788888999889999999999999
Q ss_pred hhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECC
Q 003468 577 TALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITG 656 (817)
Q Consensus 577 ~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TG 656 (817)
+|+|++++||+++ +.+|+|+|+++|+||+||+++++|+.|+++|++++|+||
T Consensus 501 ~G~rvl~~A~~~~----------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTG 552 (884)
T TIGR01522 501 AGLRVIAFASGPE----------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552 (884)
T ss_pred cCCEEEEEEEEcC----------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECC
Confidence 9999999999853 357999999999999999999999999999999999999
Q ss_pred CCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHH--HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCC
Q 003468 657 DNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN--QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG 734 (817)
Q Consensus 657 d~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg 734 (817)
|+..+|.++|+++|+..... ..++|++++.+.+ ....+ .+..+|+|++|+||..+++.+|+.|+.|+|+|||
T Consensus 553 D~~~tA~~ia~~~Gi~~~~~----~~v~g~~l~~~~~~~l~~~~--~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDG 626 (884)
T TIGR01522 553 DSQETAVSIARRLGMPSKTS----QSVSGEKLDAMDDQQLSQIV--PKVAVFARASPEHKMKIVKALQKRGDVVAMTGDG 626 (884)
T ss_pred CCHHHHHHHHHHcCCCCCCC----ceeEhHHhHhCCHHHHHHHh--hcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 99999999999999975432 3567888877632 22223 3678999999999999999999999999999999
Q ss_pred ccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 735 VNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 735 ~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
.||+|||++||||||||.+|+++++++||+++.+|+++.+++++++||++|+||++++.|.++.|+..++..+++.+
T Consensus 627 vND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 627 VNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred cccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999779999999999999999999999999999999999999999999999998877665544
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.3e-111 Score=1000.86 Aligned_cols=667 Identities=28% Similarity=0.462 Sum_probs=571.2
Q ss_pred ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Q 003468 23 TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDG 102 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 102 (817)
+.+.|..+.+++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|++|++++++++++++++.+
T Consensus 12 ~~~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~---- 86 (867)
T TIGR01524 12 LLKESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD---- 86 (867)
T ss_pred HHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh----
Confidence 56778899999999999986 7999999999999999999999888899999999999999999999999998763
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEec------CCccceeeecCCccCCcEEE
Q 003468 103 EEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTR------DGKKIPSLSAKELVPGDIVE 176 (817)
Q Consensus 103 ~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r------~g~~~~~i~~~dLv~GDII~ 176 (817)
.|.++++|+++++++.++++++|+|+++++++|+++.+..++|+| ||++ ++|+++||||||||.
T Consensus 87 ---------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~-~~I~~~eLv~GDiV~ 156 (867)
T TIGR01524 87 ---------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSM-DEVPIDALVPGDLIE 156 (867)
T ss_pred ---------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeE-EEEEhhcCCCCCEEE
Confidence 678889999999999999999999999999999999999999999 8998 899999999999999
Q ss_pred ecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccch
Q 003468 177 LKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEI 255 (817)
Q Consensus 177 l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~ 255 (817)
|++||+|||||+|++ +..+.||||+|||||.|+.|.+++.. ++.+..+.+|++|+||.|.+|.+.++|++||.+|.+
T Consensus 157 l~~Gd~VPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~ 234 (867)
T TIGR01524 157 LAAGDIIPADARVIS--ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWF 234 (867)
T ss_pred ECCCCEEcccEEEEe--cCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHH
Confidence 999999999999997 44689999999999999999987542 445567788999999999999999999999999999
Q ss_pred hhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHH
Q 003468 256 GKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALA 335 (817)
Q Consensus 256 g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll 335 (817)
|+|.+.+.+ ...++|+++.+++++.++..+++++++++++++.... .+| ...+.++++++
T Consensus 235 gki~~~v~~---~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~------~~~-----------~~~~~~al~l~ 294 (867)
T TIGR01524 235 GSLAIAATE---RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK------GDW-----------LEAFLFALAVA 294 (867)
T ss_pred HHHHHHhhC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc------CCH-----------HHHHHHHHHHH
Confidence 999998876 3457899999999999988877777766655542211 112 34577889999
Q ss_pred hhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecC
Q 003468 336 VAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQG 415 (817)
Q Consensus 336 v~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~ 415 (817)
+++|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 295 v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~------------ 362 (867)
T TIGR01524 295 VGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG------------ 362 (867)
T ss_pred HHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC------------
Confidence 99999999999999999999999999999999999999999999999999999999999998752210
Q ss_pred CccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhh
Q 003468 416 TTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVL 495 (817)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~ 495 (817)
.. ...++.++++++.. + ...+||+|.|++.++......
T Consensus 363 ----------------~~---~~~~l~~a~l~~~~--~------~~~~~p~~~Al~~~~~~~~~~--------------- 400 (867)
T TIGR01524 363 ----------------ET---SERVLKMAWLNSYF--Q------TGWKNVLDHAVLAKLDESAAR--------------- 400 (867)
T ss_pred ----------------CC---HHHHHHHHHHhCCC--C------CCCCChHHHHHHHHHHhhchh---------------
Confidence 00 11233333333321 1 114699999999987643210
Q ss_pred hhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHH
Q 003468 496 RCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMS 575 (817)
Q Consensus 496 ~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 575 (817)
.....+.++..+||+|+||+|+++++..++...+++||+||.++++|+.+. .+|...+++++.++++.+.+++++
T Consensus 401 ----~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a 475 (867)
T TIGR01524 401 ----QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMN 475 (867)
T ss_pred ----hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHH
Confidence 011245677889999999999999986655688999999999999998764 467778899888889999999999
Q ss_pred HhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEEC
Q 003468 576 STALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVIT 655 (817)
Q Consensus 576 ~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~T 655 (817)
++|+|++++|||++..+..+ . ....|++|+|+|+++|+||+|++++++|++|+++||+++|+|
T Consensus 476 ~~G~rvlavA~~~~~~~~~~-------------~----~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiT 538 (867)
T TIGR01524 476 RQGIRVIAVATKTLKVGEAD-------------F----TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLT 538 (867)
T ss_pred hcCCEEEEEEEeccCccccc-------------c----cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEc
Confidence 99999999999976431100 0 011267899999999999999999999999999999999999
Q ss_pred CCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHH--HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcC
Q 003468 656 GDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHN--QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGD 733 (817)
Q Consensus 656 Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GD 733 (817)
||+..+|.++|+++|+... ..++|.+++.+.+ ....+. +..+|+|++|+||.++|+.+|++|+.|+|+||
T Consensus 539 GD~~~tA~aIA~~lGI~~~------~v~~g~~l~~~~~~el~~~~~--~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GD 610 (867)
T TIGR01524 539 GDNEIVTARICQEVGIDAN------DFLLGADIEELSDEELARELR--KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGD 610 (867)
T ss_pred CCCHHHHHHHHHHcCCCCC------CeeecHhhhhCCHHHHHHHhh--hCeEEEECCHHHHHHHHHHHHhCCCEEEEECC
Confidence 9999999999999999632 3577877776622 222232 56799999999999999999999999999999
Q ss_pred CccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 734 GVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 734 g~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
|.||+|||++|||||||| +|+|+||++||+|+++|+|+.|+.++++||++|+||+|+++|.++.|+..+++++++.+
T Consensus 611 GvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~ 687 (867)
T TIGR01524 611 GINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASA 687 (867)
T ss_pred CcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999 89999999999999999999999999999999999999999999999999988776554
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.6e-108 Score=981.34 Aligned_cols=710 Identities=58% Similarity=0.890 Sum_probs=579.3
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEE
Q 003468 75 ILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATV 154 (817)
Q Consensus 75 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V 154 (817)
+++||++|++++|+++++++++++++.. +......|+++++|++++++++.++++||+++++.+++|+++.+.+++|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~---~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~V 77 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEE---GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKV 77 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccc---cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 4789999999999999999999876542 1122347999999999999999999999999999999999998999999
Q ss_pred ecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCC-CCCCCCCccceeee
Q 003468 155 TRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVP-ENSDIQGKKCMVFA 233 (817)
Q Consensus 155 ~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~-~~~~~~~~~~~l~~ 233 (817)
+|+|++ ++|+++||||||||.|++||+|||||+|++ ++.+.||||+|||||.|+.|.++..+ +.....+++|++|+
T Consensus 78 iRdg~~-~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~--~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~ 154 (917)
T TIGR01116 78 LRDGRW-SVIKAKDLVPGDIVELAVGDKVPADIRVLS--LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFS 154 (917)
T ss_pred EECCEE-EEEEHHHCCCCCEEEECCCCEeeccEEEEE--ecceEEEcccccCCCCcccccccccCccccCcccccceeee
Confidence 999998 999999999999999999999999999997 34799999999999999999886443 22344567899999
Q ss_pred CcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 003468 234 GTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGW 313 (817)
Q Consensus 234 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 313 (817)
||.+.+|++.++|++||.+|.+|+|.+.+..+ ..+++|+++++++++..++.+++++++++|+++...+.......+|
T Consensus 155 GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~--~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (917)
T TIGR01116 155 GTLVVAGKARGVVVRTGMSTEIGKIRDEMRAA--EQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232 (917)
T ss_pred CCEEecceEEEEEEEeCCCCHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 99999999999999999999999999988876 6678999999999999998877777777766543322111111122
Q ss_pred CcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCcc
Q 003468 314 PRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQM 393 (817)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m 393 (817)
+..+...+..++++++++|||+||+++++++++++++|+++++++|+++++|+||++|+||||||||||+|+|
T Consensus 233 -------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m 305 (917)
T TIGR01116 233 -------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 305 (917)
T ss_pred -------HHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeE
Confidence 2334456667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeCCcCCccceeeecCCccCCCCCcccCCC--CCCCCHHHHHHHHHHhHhcCCeeeecC--CeeEeCCChhHHH
Q 003468 394 AVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWP--VGRMDANLQTIAKISAVCNDAGVEQSG--NHYVASGMPTEAA 469 (817)
Q Consensus 394 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~p~e~a 469 (817)
+|.+++..+..+.....+...+..|++......... ..........++.++++||++.+...+ ..+...|+|+|.|
T Consensus 306 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~A 385 (917)
T TIGR01116 306 SVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAA 385 (917)
T ss_pred EEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHH
Confidence 999999876433223334444555555332111100 001223456778889999998765422 2344569999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccc
Q 003468 470 LKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFV 549 (817)
Q Consensus 470 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~ 549 (817)
|+.++++.|+............ ........++..+++++++||+|+|||||++++. ++++.+|+|||||.|+++|+++
T Consensus 386 Ll~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~ 463 (917)
T TIGR01116 386 LKVLVEKMGLPATKNGVSSKRR-PALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHI 463 (917)
T ss_pred HHHHHHHcCCCchhcccccccc-cccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccce
Confidence 9999999887543211100000 0000011223456789999999999999999985 4678999999999999999988
Q ss_pred cccCCceeecCHHHHHHHHHHHHHHHH-hhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEec
Q 003468 550 QLLDGSVVELDQYSRDLILQSLQEMSS-TALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVG 628 (817)
Q Consensus 550 ~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~ 628 (817)
...+|...+++++.++++.+.+++|++ +|+||+++|||+++.+..... ..+...++.+|+||+|+|+++
T Consensus 464 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~----------~~~~~~~~~~e~~l~~lGl~~ 533 (917)
T TIGR01116 464 LNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDL----------LSDPANFEAIESDLTFIGVVG 533 (917)
T ss_pred ecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccc----------cccchhhhhhcCCcEEEEEee
Confidence 776788899999999999999999999 999999999998754211100 011123456799999999999
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 629 LRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 629 ~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
++||+|++++++|+.|+++|++++|+|||+..+|.++|+++|+..++..+....++|.++..+.+........+..+|+|
T Consensus 534 ~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar 613 (917)
T TIGR01116 534 MLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSR 613 (917)
T ss_pred eeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEe
Confidence 99999999999999999999999999999999999999999998665544445678888877633222222346789999
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhH
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNM 788 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 788 (817)
++|+||.++++.+|+.|+.|+|+|||.||+|||++|||||||| +|++.+|++||+++.+|+|..|++++++||++|+|+
T Consensus 614 ~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni 692 (917)
T TIGR01116 614 VEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNM 692 (917)
T ss_pred cCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 789 KAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 789 ~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
+++++|.+++|+..+++++++.+.
T Consensus 693 ~k~i~~~l~~ni~~~~~~~~~~~~ 716 (917)
T TIGR01116 693 KQFIRYMISSNIGEVVCIFLTAAL 716 (917)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHH
Confidence 999999999999999988877554
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.2e-106 Score=946.86 Aligned_cols=616 Identities=31% Similarity=0.496 Sum_probs=524.6
Q ss_pred CCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHH
Q 003468 45 GLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILI 124 (817)
Q Consensus 45 GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i 124 (817)
|||++||++|+++||+|+++. +++++|+.|+++|++|++++++++++++++++ .|.++++++++++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------------~~~~~~~i~~~~~ 66 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------------NWVDFVIILGLLL 66 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------------chhhhhhhhhhhH
Confidence 899999999999999999987 44578899999999999999999999998864 5778889999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCC
Q 003468 125 VNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSL 204 (817)
Q Consensus 125 ~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~L 204 (817)
++..++++||+++++++++|+++.+++++|+|||++ ++|+++||||||+|.|++||+|||||+|++ +..+.||||+|
T Consensus 67 i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~-~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~--g~~~~VDeS~L 143 (755)
T TIGR01647 67 LNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKW-QEIPASELVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAAL 143 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEE-EEEEhhhCcCCCEEEECCCCEEeceEEEEe--cCceEEEcccc
Confidence 999999999999999999999999999999999998 899999999999999999999999999996 33489999999
Q ss_pred CCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHH
Q 003468 205 TGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEV 284 (817)
Q Consensus 205 TGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~ 284 (817)
||||.||.|.++ +.+|+||.|.+|++.++|++||.+|.+|+|.++++++ +.+++|+++.+++++.+
T Consensus 144 TGES~PV~K~~~------------~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~--~~~~~~lq~~~~~i~~~ 209 (755)
T TIGR01647 144 TGESLPVTKKTG------------DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQST--ETGSGHLQKILSKIGLF 209 (755)
T ss_pred cCCccceEeccC------------CeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhcc--CCCCCcHHHHHHHHHHH
Confidence 999999999875 6799999999999999999999999999999999887 66788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhcccc
Q 003468 285 LTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAL 364 (817)
Q Consensus 285 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~il 364 (817)
+++++++++++++++++.... .+| ...+.+++++++++|||+||++++++++.++++|+|+|++
T Consensus 210 ~~~~~~~~~~i~~~~~~~~~~-----~~~-----------~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gil 273 (755)
T TIGR01647 210 LIVLIGVLVLIELVVLFFGRG-----ESF-----------REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAI 273 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-----CCH-----------HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeE
Confidence 988888877777766543110 111 4467788999999999999999999999999999999999
Q ss_pred ccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHH
Q 003468 365 VRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKIS 444 (817)
Q Consensus 365 vk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (817)
+|+++++|+||++|+||||||||||+|+|+|.+++..+.. ++ ...++..+
T Consensus 274 vk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------------~~-----------------~~~~l~~a 323 (755)
T TIGR01647 274 VTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-------------FD-----------------KDDVLLYA 323 (755)
T ss_pred EcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC-------------CC-----------------HHHHHHHH
Confidence 9999999999999999999999999999999998864310 00 11234444
Q ss_pred hHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEE
Q 003468 445 AVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLV 524 (817)
Q Consensus 445 ~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv 524 (817)
++|++. ..+||+|.|++.++.+.+. ....++++..+||++.+|+|++++
T Consensus 324 ~~~~~~----------~~~~pi~~Ai~~~~~~~~~---------------------~~~~~~~~~~~pf~~~~k~~~~~v 372 (755)
T TIGR01647 324 ALASRE----------EDQDAIDTAVLGSAKDLKE---------------------ARDGYKVLEFVPFDPVDKRTEATV 372 (755)
T ss_pred HHhCCC----------CCCChHHHHHHHHHHHhHH---------------------HHhcCceEEEeccCCCCCeEEEEE
Confidence 555421 1478999999998764321 012345678899999999999998
Q ss_pred eecC-CcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcc
Q 003468 525 NSSS-GNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHP 603 (817)
Q Consensus 525 ~~~~-~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~ 603 (817)
+..+ |+.++++||+||.++++|+.. +..++++.+.+++++.+|+|++++||++.
T Consensus 373 ~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~~-------------- 427 (755)
T TIGR01647 373 EDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTDE-------------- 427 (755)
T ss_pred EeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEcC--------------
Confidence 8654 677889999999999999732 23456678888999999999999999731
Q ss_pred hhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcccccccc
Q 003468 604 AHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSI 683 (817)
Q Consensus 604 ~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 683 (817)
|.+|+|+|+++|+||+||+++++|++|+++||+++|+|||++.+|.++|+++||..... -.....
T Consensus 428 --------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~-~~~~l~ 492 (755)
T TIGR01647 428 --------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIY-TADVLL 492 (755)
T ss_pred --------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc-CHHHhc
Confidence 46899999999999999999999999999999999999999999999999999964200 000111
Q ss_pred ChhHHHHH--HHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhh
Q 003468 684 TGKEFMDI--HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEA 761 (817)
Q Consensus 684 ~~~~~~~~--~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ 761 (817)
++++.+.+ .+..+.+. +..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| +|+|+||++
T Consensus 493 ~~~~~~~~~~~~~~~~~~--~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkea 569 (755)
T TIGR01647 493 KGDNRDDLPSGELGEMVE--DADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSA 569 (755)
T ss_pred CCcchhhCCHHHHHHHHH--hCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHh
Confidence 22222222 11222222 45699999999999999999999999999999999999999999999999 799999999
Q ss_pred cCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 762 SDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 762 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
||+|+++|+++.|+.++++||++|+||+|++.|.++.|+..+++++++.+
T Consensus 570 ADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l 619 (755)
T TIGR01647 570 ADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLIL 619 (755)
T ss_pred CCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876665543
No 13
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-107 Score=878.37 Aligned_cols=728 Identities=31% Similarity=0.486 Sum_probs=613.1
Q ss_pred ccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccC
Q 003468 23 TFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDG 102 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 102 (817)
..+.|.++.+|++++|.+|..+|||.+++.+++.+.|+|.+++|+..+-|..|.+|+++.+.+++|++++++++.+.+..
T Consensus 36 ~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~ 115 (1019)
T KOG0203|consen 36 SMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQA 115 (1019)
T ss_pred eeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999887754
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCc
Q 003468 103 EEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDK 182 (817)
Q Consensus 103 ~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~ 182 (817)
.....-+....+.++++..++++..+..+||+.+..+.++.++++.|..++|+|+|+. ..+.++||||||+|.++-|++
T Consensus 116 s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k-~~i~~eelVvGD~v~vk~Gdr 194 (1019)
T KOG0203|consen 116 STEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEK-MTINAEELVVGDLVEVKGGDR 194 (1019)
T ss_pred ccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeeccee-EEechhhcccccceeeccCCc
Confidence 3322223345666777777888888999999999999999999999999999999998 899999999999999999999
Q ss_pred ccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHh
Q 003468 183 VPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQI 262 (817)
Q Consensus 183 iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 262 (817)
||||.+++. +..++||+|+|||||.|....+....++. .+.+|+.|.+|.+++|.+.++|++||.+|.+|+|+.+-
T Consensus 195 VPADiRiis--~~g~~vdnsslTGesEP~~~~~~~t~~~~--~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~ 270 (1019)
T KOG0203|consen 195 VPADIRIIS--ATGCKVDNSSLTGESEPQTRSPEFTHENP--LETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLA 270 (1019)
T ss_pred ccceeEEEE--ecceeEeccccccccCCccCCccccccCc--hhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhh
Confidence 999999997 57799999999999999998876543333 77889999999999999999999999999999999876
Q ss_pred hhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCc
Q 003468 263 HEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEG 342 (817)
Q Consensus 263 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~ 342 (817)
... +..++|++..++++..++..+++.+++.+|++..... .+| ...+.+.++++++.+|+|
T Consensus 271 ~~~--~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g------y~~-----------l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 271 SGL--EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG------YEW-----------LRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred ccC--CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc------chh-----------HHHhhhhheeEEecCcCC
Confidence 655 7788999999999999888877777777665554321 122 334445788999999999
Q ss_pred hHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCC
Q 003468 343 LPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSD 422 (817)
Q Consensus 343 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (817)
|+.+++.++..-.+||+++++++|++.+.|+||..++||+|||||||+|+|+|.++|..+.-......-+..+..+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~---- 407 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSF---- 407 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccc----
Confidence 9999999999999999999999999999999999999999999999999999999998764221111000111111
Q ss_pred CcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCC-----eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhh
Q 003468 423 GRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGN-----HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRC 497 (817)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 497 (817)
...+.....+..++.+||.+.....+. .....|++.|.||+++++..-..
T Consensus 408 --------~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~----------------- 462 (1019)
T KOG0203|consen 408 --------DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGS----------------- 462 (1019)
T ss_pred --------cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcch-----------------
Confidence 123566778899999999987764221 23446899999999998753221
Q ss_pred hhhccccccceEeeccCCCCceEEEEEeecC---CcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHH
Q 003468 498 CQLWNTLEQRFATLEFDRDRKSMGVLVNSSS---GNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEM 574 (817)
Q Consensus 498 ~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~---~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 574 (817)
....+.....+.+.||+|.+|..-.+.+..+ .+..+.+|||||.++++|+.+.. +|+..|+++..++.+.+...++
T Consensus 463 ~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~l 541 (1019)
T KOG0203|consen 463 VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLEL 541 (1019)
T ss_pred HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHh
Confidence 1223455677899999999999988877544 46778899999999999998766 8899999999999999999999
Q ss_pred HHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEE
Q 003468 575 SSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVI 654 (817)
Q Consensus 575 ~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~ 654 (817)
...|.||++||++.++++ ++.... ..+......--.+|.|+|++++-||+|..+++++..|+.+||+++|+
T Consensus 542 g~~GerVlgF~~~~l~~~--~~p~~~-------~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimV 612 (1019)
T KOG0203|consen 542 GGLGERVLGFCDLELPDE--KFPRGF-------QFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMV 612 (1019)
T ss_pred hhcchHHHHHHHHhcchh--cCCCce-------EeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEE
Confidence 999999999999887653 111110 00111112224689999999999999999999999999999999999
Q ss_pred CCCCHhhHHHHHHHhCCCCCCccc--------------------cccccChhHHHHH--HHHhHhhccCCceEEEecCcc
Q 003468 655 TGDNKNTAEAICREIGVFGAHEDI--------------------SSQSITGKEFMDI--HNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 655 TGd~~~~a~~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~r~~p~ 712 (817)
|||++.||+++|+..||....... ...+++|.|+.++ ++....+.+....||||.+|+
T Consensus 613 TgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPq 692 (1019)
T KOG0203|consen 613 TGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQ 692 (1019)
T ss_pred ecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCcc
Confidence 999999999999999986532211 1235778888777 344556666778999999999
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFI 792 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i 792 (817)
||..||+..|+.|..|+++|||.||+||||+||||||||.+|+|++|++||+|++||||++|+..+++||.+|+|+||.|
T Consensus 693 QKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsI 772 (1019)
T KOG0203|consen 693 QKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSI 772 (1019)
T ss_pred ceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHhhhccc
Q 003468 793 RYGFCHLENHCLSLELNLDKA 813 (817)
Q Consensus 793 ~~~~~~n~~~~~~~~~~~~~~ 813 (817)
.|.+++|+.++.+.++|++..
T Consensus 773 AYTLTsNipEI~PfL~fi~~g 793 (1019)
T KOG0203|consen 773 AYTLTSNIPEITPFLLFILFG 793 (1019)
T ss_pred HHHHHhcchhHhHHHHHHHhC
Confidence 999999999999999888754
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.5e-103 Score=950.77 Aligned_cols=673 Identities=22% Similarity=0.307 Sum_probs=530.7
Q ss_pred CCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHH
Q 003468 43 KIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLI 122 (817)
Q Consensus 43 ~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 122 (817)
..|||.+|+++|+++||+|+++.++ +++|++++++|.+|++++++++++++++. .+|+++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------------~~~~~~~~i~~i 202 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD-------------EYYYYSLCIVFM 202 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh-------------hhHHHHHHHHHH
Confidence 4699999999999999999998864 79999999999999999888876665532 167889999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEec--CCCcccccEEEEeecCCeEEEe
Q 003468 123 LIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELK--VGDKVPADMRLLRLTSSTVRVE 200 (817)
Q Consensus 123 ~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~--~G~~iPaD~~ll~~~~g~~~Vd 200 (817)
++++.+++.++++++.+.++++.. .+..++|+|+|++ ++|+++||||||||.|+ +|++|||||+|++ |++.||
T Consensus 203 ~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~-~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~Vd 277 (1054)
T TIGR01657 203 SSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKW-VTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVN 277 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEE-EEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEe
Confidence 999999999999999888888755 4578999999998 99999999999999999 9999999999995 689999
Q ss_pred ecCCCCCccccccccccCC--C----CCCCCCccceeeeCcEEee-------CeEEEEEeeeCCccchhhhHhHhhhhcc
Q 003468 201 QGSLTGESEAVSKTVKTVP--E----NSDIQGKKCMVFAGTTVVN-------GTCTCLVTNTGMNTEIGKVHSQIHEASQ 267 (817)
Q Consensus 201 es~LTGEs~pv~K~~~~~~--~----~~~~~~~~~~l~~Gt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 267 (817)
||+|||||.|+.|.+.+.. . .....+++|++|+||.|++ |.+.++|++||.+|..|++.+.+..+
T Consensus 278 ES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~-- 355 (1054)
T TIGR01657 278 ESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355 (1054)
T ss_pred cccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCC--
Confidence 9999999999999885431 1 1123467899999999995 78999999999999999999998876
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHH
Q 003468 268 NEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVI 347 (817)
Q Consensus 268 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~ 347 (817)
....+++++.+.++...+..++++.++++++.... .+. .....+..+++++++++|++||+++
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~--------~~~---------~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIK--------DGR---------PLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------cCC---------cHHHHHHHHHHHHHhhcCchHHHHH
Confidence 56678888888777665544433322222221111 111 1144577889999999999999999
Q ss_pred HHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccC
Q 003468 348 TTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEG 427 (817)
Q Consensus 348 ~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (817)
+++++++++||+|+|++||++.++|++|++|++|||||||||+|+|+|.+++..+.... . ......
T Consensus 419 ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~----~--~~~~~~-------- 484 (1054)
T TIGR01657 419 SIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQE----F--LKIVTE-------- 484 (1054)
T ss_pred HHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccc----c--cccccc--------
Confidence 99999999999999999999999999999999999999999999999999987542110 0 000000
Q ss_pred CCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCch---hhhhhhhhcccc
Q 003468 428 WPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPE---DVLRCCQLWNTL 504 (817)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~ 504 (817)
........+..+++.||+.... ++ ...|||+|.|+++++. +............. .+. .......
T Consensus 485 ----~~~~~~~~~~~~~a~C~~~~~~--~~--~~~Gdp~E~al~~~~~---~~~~~~~~~~~~~~~~~~i~--~~~~~~~ 551 (1054)
T TIGR01657 485 ----DSSLKPSITHKALATCHSLTKL--EG--KLVGDPLDKKMFEATG---WTLEEDDESAEPTSILAVVR--TDDPPQE 551 (1054)
T ss_pred ----ccccCchHHHHHHHhCCeeEEE--CC--EEecCHHHHHHHHhCC---CEEECCCCccccccccccee--ccCCCce
Confidence 0001223455667899986532 22 4579999999998753 21110000000000 000 0001235
Q ss_pred ccceEeeccCCCCceEEEEEeecC-CcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceee
Q 003468 505 EQRFATLEFDRDRKSMGVLVNSSS-GNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLG 583 (817)
Q Consensus 505 ~~~l~~~~F~s~~k~msvvv~~~~-~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~ 583 (817)
+.+++++||+|++|||||+++..+ ++.++|+|||||.|+++|+... .++.+.+.+++|+++|+||+|
T Consensus 552 ~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~------------~p~~~~~~~~~~a~~G~RVLa 619 (1054)
T TIGR01657 552 LSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET------------VPSDYQEVLKSYTREGYRVLA 619 (1054)
T ss_pred EEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC------------CChhHHHHHHHHHhcCCEEEE
Confidence 678999999999999999998654 4578999999999999998421 125677889999999999999
Q ss_pred eeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH
Q 003468 584 FAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE 663 (817)
Q Consensus 584 ~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 663 (817)
+|||++.... +. ......++.+|+||+|+|+++|+||+||+++++|+.|+++||+++|+|||++.||.
T Consensus 620 lA~k~l~~~~--~~----------~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~ 687 (1054)
T TIGR01657 620 LAYKELPKLT--LQ----------KAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAV 687 (1054)
T ss_pred EEEeecCccc--hh----------hhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 9999875310 00 01112356689999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccc-------------------------------------------------cccccChhHHHHHHH-
Q 003468 664 AICREIGVFGAHEDI-------------------------------------------------SSQSITGKEFMDIHN- 693 (817)
Q Consensus 664 ~ia~~~gi~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~~- 693 (817)
++|+++||...+..+ +..+++|+++..+.+
T Consensus 688 ~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~ 767 (1054)
T TIGR01657 688 HVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH 767 (1054)
T ss_pred HHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHh
Confidence 999999997543110 023567888766521
Q ss_pred ----HhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccC
Q 003468 694 ----QKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADD 769 (817)
Q Consensus 694 ----~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~ 769 (817)
....+. +..||||++|+||.++|+.+|+.|+.|+|+|||.||+||||+||||||||+ + |+ ..+||+++.++
T Consensus 768 ~~~~l~~~~~--~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~-~-da-s~AA~f~l~~~ 842 (1054)
T TIGR01657 768 SPELLLRLLS--HTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSE-A-EA-SVAAPFTSKLA 842 (1054)
T ss_pred hHHHHHHHHh--cCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecc-c-cc-eeecccccCCC
Confidence 222333 567999999999999999999999999999999999999999999999994 2 44 58999999999
Q ss_pred CccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhh
Q 003468 770 NFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELN 809 (817)
Q Consensus 770 ~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 809 (817)
++++|+++|++||+++.|++++++|.+.+++..++++++.
T Consensus 843 ~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l 882 (1054)
T TIGR01657 843 SISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSIL 882 (1054)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887776553
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2e-96 Score=893.84 Aligned_cols=724 Identities=23% Similarity=0.254 Sum_probs=545.6
Q ss_pred cCCCccCCCCCCCH---HHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 003468 58 YGYNELEKHEGTSI---FQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQE 134 (817)
Q Consensus 58 ~G~N~~~~~~~~~~---~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e 134 (817)
|.+|.+...|++.+ ++.+++||+++.+++|+++++++++..+.+. ..+...++++++++++.+.+.+++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--------~~~t~~~pL~~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--------YRGTSIVPLAFVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--------CccHhHHhHHHHHHHHHHHHHHHH
Confidence 67899988888775 8999999999999999999999998654322 122334455556667788899999
Q ss_pred hHHHHHHHHHHhhcccceEEecC-CccceeeecCCccCCcEEEecCCCcccccEEEEeecC--CeEEEeecCCCCCcccc
Q 003468 135 SNAEKALEALKEIQSEQATVTRD-GKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTS--STVRVEQGSLTGESEAV 211 (817)
Q Consensus 135 ~~~~~~~~~l~~~~~~~~~V~r~-g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~--g~~~Vdes~LTGEs~pv 211 (817)
++++++.+.+ +++.++|+|+ |++ ++++++||+|||||.|++||+||||++|+++++ |.|+||||+|||||.|+
T Consensus 73 ~~r~~~d~~~---n~~~~~v~~~~~~~-~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~ 148 (1057)
T TIGR01652 73 IRRRRRDKEV---NNRLTEVLEGHGQF-VEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLK 148 (1057)
T ss_pred HHHHHhHHHH---hCcEEEEECCCCcE-EEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecce
Confidence 9888877654 4568999997 787 899999999999999999999999999998764 78999999999999999
Q ss_pred ccccccCC--------------------C----------------CCCCCCccceeeeCcEEee-CeEEEEEeeeCCccc
Q 003468 212 SKTVKTVP--------------------E----------------NSDIQGKKCMVFAGTTVVN-GTCTCLVTNTGMNTE 254 (817)
Q Consensus 212 ~K~~~~~~--------------------~----------------~~~~~~~~~~l~~Gt~v~~-g~~~~~V~~tG~~T~ 254 (817)
.|.+.+.. | .....+.+|++++||.+.+ |++.|+|++||.+|+
T Consensus 149 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk 228 (1057)
T TIGR01652 149 LRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTK 228 (1057)
T ss_pred EeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhh
Confidence 99864211 1 1123456899999999999 999999999999999
Q ss_pred hhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcc----cccchhhHHHHHHH
Q 003468 255 IGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRN----FKFSFEKCTYYFEI 330 (817)
Q Consensus 255 ~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 330 (817)
+++... .. ..+.++++++++++..++..+.++++++++++...+... .....|... .......++..|..
T Consensus 229 ~~~n~~---~~--~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~ 302 (1057)
T TIGR01652 229 LMRNAT---QA--PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDA-HGKDLWYIRLDVSERNAAANGFFSFLT 302 (1057)
T ss_pred hhhcCC---CC--cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecc-cCCCccceecCcccccchhHHHHHHHH
Confidence 876532 22 456799999999999888877777777776654332210 000122111 01112233446778
Q ss_pred HHHHHhhhccCchHHHHHHHHHhHH------HHHhhc----cccccccccccccCCeeEEecCCCcccccCccEEEEEEE
Q 003468 331 AVALAVAAIPEGLPAVITTCLALGT------RKMAQK----NALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVA 400 (817)
Q Consensus 331 ~i~llv~~iP~~L~~~~~~~~~~~~------~~l~k~----~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~ 400 (817)
++.++..++|++|+++++++..+++ .+|.++ ++++|+.+++|+||+|++||+|||||||+|+|+++++++
T Consensus 303 ~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i 382 (1057)
T TIGR01652 303 FLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSI 382 (1057)
T ss_pred HHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEE
Confidence 8889999999999999999999999 788764 599999999999999999999999999999999999998
Q ss_pred eCCcCCccce----eeecCCc-cCCCC-------C--------cccCC-CCCCCCHHHHHHHHHHhHhcCCeeee-cCC-
Q 003468 401 VGSRAGTLRS----FNVQGTT-YNPSD-------G--------RIEGW-PVGRMDANLQTIAKISAVCNDAGVEQ-SGN- 457 (817)
Q Consensus 401 ~~~~~~~~~~----~~~~~~~-~~~~~-------~--------~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~- 457 (817)
.+..|+.... ....... +.+.. . ..... ...........++.++++||++.++. .++
T Consensus 383 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~ 462 (1057)
T TIGR01652 383 AGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGP 462 (1057)
T ss_pred CCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCC
Confidence 7765432100 0000000 00000 0 00000 00011234567888999999987663 111
Q ss_pred --eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEE
Q 003468 458 --HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLV 535 (817)
Q Consensus 458 --~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~ 535 (817)
..+..++|+|.||+.+|+..|+......... ..+..........+++++.+||+|+||||||+++.+++++.+|+
T Consensus 463 ~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~---~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~ 539 (1057)
T TIGR01652 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKS---ISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLC 539 (1057)
T ss_pred CceEEEccCCcHHHHHHHHHHCCCEEEEecCCc---eEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEE
Confidence 3355799999999999999998654221110 00000011123457889999999999999999998888889999
Q ss_pred eCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccc-cccC----CCCCcchhhccCC
Q 003468 536 KGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREF-ETYD----GDEDHPAHQLLLN 610 (817)
Q Consensus 536 KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~-~~~~----~~~~~~~~~~~~~ 610 (817)
|||||.|+++|+.. ++..++.+.+.+++|+.+|+||+++|||.++++. .++. .......++....
T Consensus 540 KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~ 609 (1057)
T TIGR01652 540 KGADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKL 609 (1057)
T ss_pred eCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 99999999999731 2345677888999999999999999999986531 1111 0000000000001
Q ss_pred CCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc------------
Q 003468 611 PTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI------------ 678 (817)
Q Consensus 611 ~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------ 678 (817)
...++.+|+||+|+|+++++||+|++++++|+.|+++||++||+|||+.+||.++|+++|+...+..+
T Consensus 610 ~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~ 689 (1057)
T TIGR01652 610 DVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR 689 (1057)
T ss_pred HHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH
Confidence 11234679999999999999999999999999999999999999999999999999999998654321
Q ss_pred -------------------------cccccChhHHHHHHH------HhHhhccCCceEEEecCcccHHHHHHHHhcC-CC
Q 003468 679 -------------------------SSQSITGKEFMDIHN------QKNYLRQDGGLLFSRAEPRHKQEIVRLLKED-GE 726 (817)
Q Consensus 679 -------------------------~~~~~~~~~~~~~~~------~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-~~ 726 (817)
...+++|+++..+.+ ....+..++..||||++|+||.++|+.+|+. |+
T Consensus 690 ~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~ 769 (1057)
T TIGR01652 690 SVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGK 769 (1057)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCC
Confidence 012577777765422 1223444567899999999999999999998 99
Q ss_pred EEEEEcCCccCHHHhhhCCceEEeCCCccH--HHHhhcCEEeccCCccHHHHHH-HHhHHHHHhHHHHHHHHhhhhHHHH
Q 003468 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTE--VAKEASDMVLADDNFGTIVAAV-GEGRSIYNNMKAFIRYGFCHLENHC 803 (817)
Q Consensus 727 ~v~~~GDg~ND~~~l~~A~vgiamg~~~~~--~ak~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~n~~~~ 803 (817)
.|+|+|||.||++||++|||||++. |.+ .|+.+||+++.+ |..+.+++ .|||++|+|+++++.|.|++|+..+
T Consensus 770 ~vl~iGDG~ND~~mlk~AdVGIgi~--g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~ 845 (1057)
T TIGR01652 770 TTLAIGDGANDVSMIQEADVGVGIS--GKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFA 845 (1057)
T ss_pred eEEEEeCCCccHHHHhhcCeeeEec--ChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999763 555 589999999986 99999987 8999999999999999999999999
Q ss_pred HHHHhhhcccccc
Q 003468 804 LSLELNLDKAIFF 816 (817)
Q Consensus 804 ~~~~~~~~~~~f~ 816 (817)
++++++.+.++|+
T Consensus 846 ~~~~~~~~~~~~s 858 (1057)
T TIGR01652 846 IIQFWYSFYNGFS 858 (1057)
T ss_pred HHHHHHHHHHcCC
Confidence 9999988877664
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.9e-93 Score=855.89 Aligned_cols=725 Identities=22% Similarity=0.243 Sum_probs=545.5
Q ss_pred hhcCCCccCCCCCCC---HHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 003468 56 EIYGYNELEKHEGTS---IFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIW 132 (817)
Q Consensus 56 ~~~G~N~~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~ 132 (817)
.+|..|.+...|++. +++.+++||+++.+++|+++++++++..+... ..+...+++++++++..+.+.+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--------~~~t~~~PL~~vl~v~~ike~~ 156 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--------GRGASILPLAFVLLVTAVKDAY 156 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--------CcchHHHHHHHHHHHHHHHHHH
Confidence 368999999888864 78999999999999999999999987654322 1334456677777777788888
Q ss_pred HHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecC--CeEEEeecCCCCCccc
Q 003468 133 QESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTS--STVRVEQGSLTGESEA 210 (817)
Q Consensus 133 ~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~--g~~~Vdes~LTGEs~p 210 (817)
++++++++.+.. ++..++|+|+|.+ ++++|++|+|||+|+|++||+||||++|+++++ |.|+||||+|||||.|
T Consensus 157 Ed~~r~k~d~~~---N~~~~~v~~~~~~-~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~ 232 (1178)
T PLN03190 157 EDWRRHRSDRIE---NNRLAWVLVDDQF-QEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232 (1178)
T ss_pred HHHHHHHhHHhh---cCcEEEEEECCeE-EEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeee
Confidence 888887776655 3568999999998 899999999999999999999999999998664 7899999999999999
Q ss_pred cccccccCC------------------CCC---------------CCCCccceeeeCcEEeeC-eEEEEEeeeCCccchh
Q 003468 211 VSKTVKTVP------------------ENS---------------DIQGKKCMVFAGTTVVNG-TCTCLVTNTGMNTEIG 256 (817)
Q Consensus 211 v~K~~~~~~------------------~~~---------------~~~~~~~~l~~Gt~v~~g-~~~~~V~~tG~~T~~g 256 (817)
+.|.+++.. |+. ...+.+|++++||.+.+. ++.|+|++||.+|++.
T Consensus 233 k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~ 312 (1178)
T PLN03190 233 KTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM 312 (1178)
T ss_pred eEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh
Confidence 999875321 110 123667999999999985 8999999999999953
Q ss_pred hhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccccCCCCccc--------ccch---
Q 003468 257 KVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLT----WEYVDGWPRNF--------KFSF--- 321 (817)
Q Consensus 257 ~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~--------~~~~--- 321 (817)
++......+.+++++.++++..++..+.+++|+++.++...+... ..| -.|.... ...+
T Consensus 313 -----~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~y-l~~~~~~~~~~~~~~~~~~~~~ 386 (1178)
T PLN03190 313 -----LNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDT-IPFYRRKDFSEGGPKNYNYYGW 386 (1178)
T ss_pred -----hcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc-cccccccccccccccccccchh
Confidence 333322467799999999999888877777777766654332210 001 0111100 0000
Q ss_pred -hhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhcc----------ccccccccccccCCeeEEecCCCccccc
Q 003468 322 -EKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKN----------ALVRKLPSVETLGCTTVICSDKTGTLTT 390 (817)
Q Consensus 322 -~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~----------ilvk~~~~le~lg~v~~I~~DKTGTLT~ 390 (817)
...+..|..++.++..++|.+|+++++++...++.+|.++. +.+|+.+.+|+||+|++||+|||||||+
T Consensus 387 ~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~ 466 (1178)
T PLN03190 387 GWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTE 466 (1178)
T ss_pred hHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCcccc
Confidence 01123344556677799999999999999988788887655 7899999999999999999999999999
Q ss_pred CccEEEEEEEeCCcCCcccee----------eecCCccCCCCCcc------cCCC---CCCCCHHHHHHHHHHhHhcCCe
Q 003468 391 NQMAVTKLVAVGSRAGTLRSF----------NVQGTTYNPSDGRI------EGWP---VGRMDANLQTIAKISAVCNDAG 451 (817)
Q Consensus 391 ~~m~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~l~~~~~ 451 (817)
|+|+++++++.+..|+..... ...+..+.+..... .... .......+..++.++++||++.
T Consensus 467 N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~ 546 (1178)
T PLN03190 467 NKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIV 546 (1178)
T ss_pred ceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCce
Confidence 999999999987666421110 00111111110000 0000 0011233567889999999987
Q ss_pred eee-cC--C-----eeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEE
Q 003468 452 VEQ-SG--N-----HYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVL 523 (817)
Q Consensus 452 ~~~-~~--~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvv 523 (817)
++. ++ + ..+..++|+|.||+.+|.+.|+....+... .+..........+++++.+||+|+||||||+
T Consensus 547 ~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~-----~i~i~~~~~~~~~~il~~~pF~S~rKrMSvI 621 (1178)
T PLN03190 547 PIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSG-----HIVIDIHGERQRFNVLGLHEFDSDRKRMSVI 621 (1178)
T ss_pred eeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCC-----eEEEeeccceecceeEEEecccccccEEEEE
Confidence 642 11 1 235667999999999999999865543211 1111122234578899999999999999999
Q ss_pred EeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccccc-ccccCC----
Q 003468 524 VNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLRE-FETYDG---- 598 (817)
Q Consensus 524 v~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~-~~~~~~---- 598 (817)
++.++++..+|+|||||.|+++|+... ++..++.+.+.+++|+++|+|||++|||.++++ +.+|..
T Consensus 622 v~~~~~~~~l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 622 LGCPDKTVKVFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred EEcCCCcEEEEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 998788899999999999999997431 223456788899999999999999999998653 222211
Q ss_pred CCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc
Q 003468 599 DEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI 678 (817)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~ 678 (817)
.......+........+.+|+||+++|+++++|++|++++++|+.|+++||++||+|||+..||.+||+.||+...+...
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 00000011111112235689999999999999999999999999999999999999999999999999999997543210
Q ss_pred ---------------------------------------------cccccChhHHHHHH------HHhHhhccCCceEEE
Q 003468 679 ---------------------------------------------SSQSITGKEFMDIH------NQKNYLRQDGGLLFS 707 (817)
Q Consensus 679 ---------------------------------------------~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~ 707 (817)
...+++|..+..+. ........+..+|||
T Consensus 773 i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~c 852 (1178)
T PLN03190 773 IIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCC 852 (1178)
T ss_pred EEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEe
Confidence 01346677666552 122334455677999
Q ss_pred ecCcccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCceEEeCCCccH--HHHhhcCEEeccCCccHHHHHH-HHhHH
Q 003468 708 RAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVAMGIAGTE--VAKEASDMVLADDNFGTIVAAV-GEGRS 783 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~--~ak~~ad~vl~~~~~~~i~~~i-~~gR~ 783 (817)
|++|.||.++|+.+|+. ++.|+|+|||.||++||++||||| |..|+| .|..+||+++.. |..+.+++ .|||+
T Consensus 853 R~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~ 928 (1178)
T PLN03190 853 RVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHW 928 (1178)
T ss_pred cCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHH
Confidence 99999999999999987 579999999999999999999999 556777 789999999987 77788874 69999
Q ss_pred HHHhHHHHHHHHhhhhHHHHHHHHhhhcccccc
Q 003468 784 IYNNMKAFIRYGFCHLENHCLSLELNLDKAIFF 816 (817)
Q Consensus 784 ~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f~ 816 (817)
+|+|+.++++|.|++|+.+++++++|.+.++||
T Consensus 929 ~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fS 961 (1178)
T PLN03190 929 NYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFT 961 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999886
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2e-91 Score=789.03 Aligned_cols=559 Identities=23% Similarity=0.328 Sum_probs=452.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHH----HhHHHHHHHHHHhhccc-c
Q 003468 77 EQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQ----ESNAEKALEALKEIQSE-Q 151 (817)
Q Consensus 77 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~----e~~~~~~~~~l~~~~~~-~ 151 (817)
.+|++|+.++++++++++++++.+....+. ..+ ..++++.|+++++++.+++.|+ |+|++++++.|+++.++ +
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~-~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~ 105 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQ-ESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMK 105 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhccc-ccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 467899999999999999988766321111 111 1234556666666666666666 78999999999998876 6
Q ss_pred eE-EecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccce
Q 003468 152 AT-VTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCM 230 (817)
Q Consensus 152 ~~-V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~ 230 (817)
++ |.|||++ ++|++++|+|||+|.|++||+|||||+|++ |...||||+|||||.||.|.++. ++ +.
T Consensus 106 a~~v~rdg~~-~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~--------d~-~~ 172 (673)
T PRK14010 106 ARRIKQDGSY-EMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG--------DF-DN 172 (673)
T ss_pred EEEEEeCCEE-EEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC--------cc-Ce
Confidence 75 7799998 899999999999999999999999999996 56799999999999999999861 11 33
Q ss_pred eeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 003468 231 VFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYV 310 (817)
Q Consensus 231 l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 310 (817)
+|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..+..+...++. +++++++|+..+..+
T Consensus 173 V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a--~~~ktp~e~~l~~l~~~l~i--i~l~~~~~~~~~~~~------ 242 (673)
T PRK14010 173 VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGA--TRKKTPNEIALFTLLMTLTI--IFLVVILTMYPLAKF------ 242 (673)
T ss_pred eecCceeecceEEEEEEEecccCHHHHHHHHHhhc--cccCCHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhh------
Confidence 99999999999999999999999999999999988 66789999776554433322 222222222111000
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCccccc
Q 003468 311 DGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTT 390 (817)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~ 390 (817)
.++ ...+.+++++++++|||+|+..++++.+.+++||+|+|+++|+++++|+||++|+||||||||||+
T Consensus 243 ~~~-----------~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~ 311 (673)
T PRK14010 243 LNF-----------NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITY 311 (673)
T ss_pred ccH-----------HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCC
Confidence 011 234566778888899999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHH
Q 003468 391 NQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAAL 470 (817)
Q Consensus 391 ~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al 470 (817)
|++.+.++...+. .....++..+.+|+.. ..||++.|+
T Consensus 312 Gn~~~~~~~~~~~-------------------------------~~~~~ll~~a~~~~~~-----------s~~P~~~AI 349 (673)
T PRK14010 312 GNRMADAFIPVKS-------------------------------SSFERLVKAAYESSIA-----------DDTPEGRSI 349 (673)
T ss_pred CCeEEEEEEeCCC-------------------------------ccHHHHHHHHHHhcCC-----------CCChHHHHH
Confidence 8887776543210 1112344555566643 248999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhcccccc
Q 003468 471 KVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQ 550 (817)
Q Consensus 471 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~ 550 (817)
+.++++.++... ......+||++++|+|++.++ + ..+.||+++.++++|+.
T Consensus 350 v~~a~~~~~~~~----------------------~~~~~~~pF~~~~k~~gv~~~---g--~~i~kGa~~~il~~~~~-- 400 (673)
T PRK14010 350 VKLAYKQHIDLP----------------------QEVGEYIPFTAETRMSGVKFT---T--REVYKGAPNSMVKRVKE-- 400 (673)
T ss_pred HHHHHHcCCCch----------------------hhhcceeccccccceeEEEEC---C--EEEEECCHHHHHHHhhh--
Confidence 999987665311 001134799999999998754 2 25669999999999974
Q ss_pred ccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccC
Q 003468 551 LLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLR 630 (817)
Q Consensus 551 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 630 (817)
+|...+. .+.+..++++++|+|+++++. |++++|+++++
T Consensus 401 --~g~~~~~------~~~~~~~~~a~~G~~~l~v~~---------------------------------~~~~lG~i~l~ 439 (673)
T PRK14010 401 --AGGHIPV------DLDALVKGVSKKGGTPLVVLE---------------------------------DNEILGVIYLK 439 (673)
T ss_pred --cCCCCch------HHHHHHHHHHhCCCeEEEEEE---------------------------------CCEEEEEEEee
Confidence 2221111 245566788999999988752 45799999999
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
||+|||++++|++|+++||+++|+|||++.||.++|+++|+.. +|+|++
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------------------v~A~~~ 488 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-------------------------------FVAECK 488 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------EEcCCC
Confidence 9999999999999999999999999999999999999999942 789999
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHH
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKA 790 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 790 (817)
|+||.++|+.+|++|+.|+|+|||.||+|+|++|||||||| +|+++||++||+|+++||++.|++++++||++|.|+++
T Consensus 489 PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~ 567 (673)
T PRK14010 489 PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGS 567 (673)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHhhhccccc
Q 003468 791 FIRYGFCHLENHCLSLELNLDKAIF 815 (817)
Q Consensus 791 ~i~~~~~~n~~~~~~~~~~~~~~~f 815 (817)
++.|.++.|++..+..+...|...|
T Consensus 568 ~~~f~~~~~~~~~~~i~~a~~~~~~ 592 (673)
T PRK14010 568 LTTFSIANDIAKYFAILPAMFMAAM 592 (673)
T ss_pred HHheeeeccHHHHHHHHHHHHHHhc
Confidence 9999999999999888877766543
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-91 Score=764.24 Aligned_cols=687 Identities=22% Similarity=0.322 Sum_probs=518.8
Q ss_pred CCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHH
Q 003468 43 KIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLI 122 (817)
Q Consensus 43 ~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 122 (817)
.+||+.+++..|+..||+|.+..+. +++++++.++..+|++++..+ ++++|+.+. +++++..|+++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~f----Sv~lW~~d~---------Y~~YA~cI~ii 223 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAF----SVALWLADS---------YYYYAFCIVII 223 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhH----Hhhhhhccc---------chhhhhHHHHH
Confidence 5799999999999999999998754 699999999999998865544 455554433 45567778888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecC-CCcccccEEEEeecCCeEEEee
Q 003468 123 LIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKV-GDKVPADMRLLRLTSSTVRVEQ 201 (817)
Q Consensus 123 ~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~-G~~iPaD~~ll~~~~g~~~Vde 201 (817)
.+.+.++..|+.++..+.++++-+. +..++|+|+|.+ ++|.++|||||||+.+.+ |-..|||++|+ +|+|.|||
T Consensus 224 sv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g~~-~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNE 298 (1140)
T KOG0208|consen 224 SVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDGFW-ETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECCEE-EEEeccccccccEEEECCCCeEeecceEEE---eCcEEeec
Confidence 8888999999999888888887654 357999999998 999999999999999988 99999999999 69999999
Q ss_pred cCCCCCccccccccccCCCC-------CCCCCccceeeeCcEEee------CeEEEEEeeeCCccchhhhHhHhhhhccC
Q 003468 202 GSLTGESEAVSKTVKTVPEN-------SDIQGKKCMVFAGTTVVN------GTCTCLVTNTGMNTEIGKVHSQIHEASQN 268 (817)
Q Consensus 202 s~LTGEs~pv~K~~~~~~~~-------~~~~~~~~~l~~Gt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 268 (817)
|+|||||.||.|.+.+...+ +.....+|++|+||.+++ +.+.++|++||.+|..|++.+++..+ +
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP--k 376 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP--K 376 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC--C
Confidence 99999999999998752211 223467899999999986 67999999999999999999999887 2
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHH
Q 003468 269 EEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVIT 348 (817)
Q Consensus 269 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~ 348 (817)
+.+++ +-+-+..++.++.+++++.+++....+.. .|.+ .-..+.+++.++.+.+|++||++++
T Consensus 377 --P~~fk--fyrds~~fi~~l~~ia~~gfiy~~i~l~~----~g~~---------~~~iiirsLDliTi~VPPALPAalt 439 (1140)
T KOG0208|consen 377 --PVNFK--FYRDSFKFILFLVIIALIGFIYTAIVLNL----LGVP---------LKTIIIRSLDLITIVVPPALPAALT 439 (1140)
T ss_pred --CcccH--HHHHHHHHHHHHHHHHHHHHHHHhHhHHH----cCCC---------HHHHhhhhhcEEEEecCCCchhhhh
Confidence 23333 33333334444445555554443332211 2221 1345778999999999999999999
Q ss_pred HHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCc---CCccceeeecCCccCCCCCcc
Q 003468 349 TCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSR---AGTLRSFNVQGTTYNPSDGRI 425 (817)
Q Consensus 349 ~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 425 (817)
++..++.+||.|+||+|.+++.+...|++|++|||||||||++.+.+..+.....+ .+.+....... .+..
T Consensus 440 vG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~------~~~~ 513 (1140)
T KOG0208|consen 440 VGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDS------LQLF 513 (1140)
T ss_pred HHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhh------ccce
Confidence 99999999999999999999999999999999999999999999999999875432 11111100000 0000
Q ss_pred cCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCC---------CCCC-----CCc
Q 003468 426 EGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVN---------HGSS-----SSP 491 (817)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~---------~~~~-----~~~ 491 (817)
..............+..+++.||+... -++ ...|+|.|..+.+.. |+..... .+.. .++
T Consensus 514 ~~l~~~~~~~~~~~~~~a~atCHSL~~--v~g--~l~GDPLdlkmfe~t---~w~~ee~~~~~~~~~~~~~~~p~v~~p~ 586 (1140)
T KOG0208|consen 514 YKLSLRSSSLPMGNLVAAMATCHSLTL--VDG--TLVGDPLDLKMFEST---GWVYEEADIEDEATREFNTLIPTVVRPP 586 (1140)
T ss_pred eeccccccCCchHHHHHHHhhhceeEE--eCC--eeccCceeeeeeecc---ceEEEeccccchhhhhhCCccCCEeCCC
Confidence 000000111123456777888995432 222 235778776554432 2211000 0000 000
Q ss_pred hhhhhh-hhhccccccceEeeccCCCCceEEEEEeec-CCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHH
Q 003468 492 EDVLRC-CQLWNTLEQRFATLEFDRDRKSMGVLVNSS-SGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQ 569 (817)
Q Consensus 492 ~~~~~~-~~~~~~~~~~l~~~~F~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~ 569 (817)
...... .+...+.+.+++.+||+|..+|||||++.. +.+..+|+|||||.|.+.|+....+ ..+.+
T Consensus 587 ~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP------------~dy~e 654 (1140)
T KOG0208|consen 587 ENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVP------------ADYQE 654 (1140)
T ss_pred cccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCC------------ccHHH
Confidence 000000 001112467899999999999999999975 4567899999999999999876554 35788
Q ss_pred HHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCC
Q 003468 570 SLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGI 649 (817)
Q Consensus 570 ~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi 649 (817)
.++.|+.+|+|++|+|+|++... .+ .......++.+|+||+|+|++.|++++|++++.+|++|.++.|
T Consensus 655 vl~~Yt~~GfRVIAlA~K~L~~~--~~----------~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnI 722 (1140)
T KOG0208|consen 655 VLKEYTHQGFRVIALASKELETS--TL----------QKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANI 722 (1140)
T ss_pred HHHHHHhCCeEEEEEecCccCcc--hH----------HHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcc
Confidence 99999999999999999998652 00 0123356788999999999999999999999999999999999
Q ss_pred eEEEECCCCHhhHHHHHHHhCCCCCCccc---------------------------------------------------
Q 003468 650 RVMVITGDNKNTAEAICREIGVFGAHEDI--------------------------------------------------- 678 (817)
Q Consensus 650 ~v~~~TGd~~~~a~~ia~~~gi~~~~~~~--------------------------------------------------- 678 (817)
|++|+||||..||..+||+||+..+...+
T Consensus 723 RtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 802 (1140)
T KOG0208|consen 723 RTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKD 802 (1140)
T ss_pred eEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccce
Confidence 99999999999999999999996432111
Q ss_pred cccccChhHHHHHHH----Hh-HhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCC
Q 003468 679 SSQSITGKEFMDIHN----QK-NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIA 753 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~----~~-~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~ 753 (817)
+...++|+.+..+.+ .. ..+. +..|||||+|.||.++|+.+|+.|..|+|+|||+||+.|||+|||||+++.
T Consensus 803 yhlA~sG~~f~~i~~~~~~l~~~Il~--~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe- 879 (1140)
T KOG0208|consen 803 YHLAMSGKTFQVILEHFPELVPKILL--KGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE- 879 (1140)
T ss_pred eEEEecCchhHHHHhhcHHHHHHHHh--cCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh-
Confidence 112355555555521 11 2222 677999999999999999999999999999999999999999999999873
Q ss_pred ccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhh
Q 003468 754 GTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELN 809 (817)
Q Consensus 754 ~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 809 (817)
..|.-||.++..-.+.+.+.+.|++||+.+..--..++|+-.+.+...+++++.
T Consensus 880 --aEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L 933 (1140)
T KOG0208|consen 880 --AEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL 933 (1140)
T ss_pred --hhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee
Confidence 356778999999889999999999999999999999999988877777665543
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.8e-88 Score=765.67 Aligned_cols=547 Identities=24% Similarity=0.338 Sum_probs=451.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhccCCC-CCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhccc-ceEE
Q 003468 77 EQFNDTLVRILLVAAVVSFVLAWYDGEE-GGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE-QATV 154 (817)
Q Consensus 77 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 154 (817)
.||++|+.++++++++++++++++.... +.......|+..+++++.+++..+++.++|+|+++.++.|+++.++ .++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5788999999999999999988653211 1112234667777788888888899999999999999999998886 6999
Q ss_pred ecCCc-cceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeee
Q 003468 155 TRDGK-KIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFA 233 (817)
Q Consensus 155 ~r~g~-~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~ 233 (817)
+|+|+ + ++|++++|+|||+|.|++||+|||||+|++ |.+.||||+|||||.||.|.++.. .+.+|+
T Consensus 109 ir~g~~~-~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~~---------~~~V~a 175 (679)
T PRK01122 109 LREPGAA-EEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGGD---------FSSVTG 175 (679)
T ss_pred EECCCEE-EEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCCc---------cCeEEe
Confidence 99988 6 899999999999999999999999999996 568999999999999999998632 234999
Q ss_pred CcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 003468 234 GTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGW 313 (817)
Q Consensus 234 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 313 (817)
||.+.+|++.++|+++|.+|.+|++.++++++ +.+++|++..++.+...++.+++++++.++.+. ++ .++
T Consensus 176 GT~v~~G~~~i~Vta~g~~S~lgki~~lve~a--~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~--~~------~g~ 245 (679)
T PRK01122 176 GTRVLSDWIVIRITANPGESFLDRMIALVEGA--KRQKTPNEIALTILLAGLTIIFLLVVATLPPFA--AY------SGG 245 (679)
T ss_pred ceEEEeeeEEEEEEEecccCHHHHHHHHHHhc--cccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHH--HH------hCc
Confidence 99999999999999999999999999999988 677899998888776665544333333322221 11 111
Q ss_pred CcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCcc
Q 003468 314 PRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQM 393 (817)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m 393 (817)
...+.+++++++++|||+|+.+.+.....++.||+|+|+++|++.++|+||++|+||||||||||+|+|
T Consensus 246 -----------~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~ 314 (679)
T PRK01122 246 -----------ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNR 314 (679)
T ss_pred -----------hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcE
Confidence 124677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHH
Q 003468 394 AVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVM 473 (817)
Q Consensus 394 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~ 473 (817)
.+.+++..+. .+ ...++.++++|+.. ..||...|++.+
T Consensus 315 ~v~~~~~~~~-----------------------------~~--~~~ll~~a~~~s~~-----------s~hP~~~AIv~~ 352 (679)
T PRK01122 315 QASEFLPVPG-----------------------------VT--EEELADAAQLSSLA-----------DETPEGRSIVVL 352 (679)
T ss_pred EEEEEEeCCC-----------------------------CC--HHHHHHHHHHhcCC-----------CCCchHHHHHHH
Confidence 9998864321 00 12345555566543 246888999999
Q ss_pred HHH-cCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhcccccccc
Q 003468 474 VEK-MGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLL 552 (817)
Q Consensus 474 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~ 552 (817)
++. .+.... +..+.....+||++.+|+|++.++ | ..++||++|.+++.|..
T Consensus 353 a~~~~~~~~~-------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~---- 404 (679)
T PRK01122 353 AKQRFNLRER-------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVES---- 404 (679)
T ss_pred HHhhcCCCch-------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----
Confidence 876 233110 001234567899999988887653 2 57999999999999963
Q ss_pred CCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCC
Q 003468 553 DGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDP 632 (817)
Q Consensus 553 ~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 632 (817)
+|... .+++.+.+++++++|+|++++|+ |++++|+++++|+
T Consensus 405 ~g~~~------~~~~~~~~~~~a~~G~~~l~va~---------------------------------~~~~lG~i~l~D~ 445 (679)
T PRK01122 405 NGGHF------PAELDAAVDEVARKGGTPLVVAE---------------------------------DNRVLGVIYLKDI 445 (679)
T ss_pred cCCcC------hHHHHHHHHHHHhCCCcEEEEEE---------------------------------CCeEEEEEEEecc
Confidence 22211 14566778889999999999984 3569999999999
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+|||++++|++|+++||+++|+|||++.+|.++|+++|+.. +++|++|+
T Consensus 446 ~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~-------------------------------v~A~~~Pe 494 (679)
T PRK01122 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FLAEATPE 494 (679)
T ss_pred CchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-------------------------------EEccCCHH
Confidence 99999999999999999999999999999999999999942 78999999
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFI 792 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i 792 (817)
+|.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+++||++||+|++|||++.|++++++||++.-.--.+-
T Consensus 495 dK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~ 573 (679)
T PRK01122 495 DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALT 573 (679)
T ss_pred HHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhh
Confidence 999999999999999999999999999999999999999 8999999999999999999999999999999885544455
Q ss_pred HHHhhh
Q 003468 793 RYGFCH 798 (817)
Q Consensus 793 ~~~~~~ 798 (817)
.|.+.-
T Consensus 574 ~f~~~n 579 (679)
T PRK01122 574 TFSIAN 579 (679)
T ss_pred hhhHHH
Confidence 676653
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=3.4e-85 Score=737.05 Aligned_cols=554 Identities=23% Similarity=0.356 Sum_probs=450.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhccCCCCCc-c--hhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhccc-ce
Q 003468 77 EQFNDTLVRILLVAAVVSFVLAWYDGEEGGE-M--EITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE-QA 152 (817)
Q Consensus 77 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~-~~ 152 (817)
.||++|+.+++++++++++++++++...+.. . .|..+...+++++.+++..+++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 5789999999999999999987653211111 1 122233345566667788889999999999999999998877 48
Q ss_pred EEec-CCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCcccee
Q 003468 153 TVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMV 231 (817)
Q Consensus 153 ~V~r-~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l 231 (817)
+|+| +|++ ++|++++|+|||+|.|++||+|||||++++ |.+.||||+|||||.||.|++++. ...+
T Consensus 108 ~vlr~dg~~-~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~---------~~~V 174 (675)
T TIGR01497 108 KLLRDDGAI-DKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD---------FASV 174 (675)
T ss_pred EEEeeCCEE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC---------ccee
Confidence 8875 8887 899999999999999999999999999996 678999999999999999998732 1239
Q ss_pred eeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 003468 232 FAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVD 311 (817)
Q Consensus 232 ~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 311 (817)
|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..++.+...+.++.+++++.+|.+.. + .
T Consensus 175 ~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a--~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~-----~---~ 244 (675)
T TIGR01497 175 TGGTRILSDWLVVECTANPGETFLDRMIALVEGA--QRRKTPNEIALTILLIALTLVFLLVTATLWPFAA-----Y---G 244 (675)
T ss_pred ecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhc--ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h---c
Confidence 9999999999999999999999999999999988 6678999988887765554433333322222110 0 1
Q ss_pred CCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccC
Q 003468 312 GWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTN 391 (817)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~ 391 (817)
+. ...+..++++++++|||+|+...+.....++.||+++|+++|++.++|+||++|+||||||||||+|
T Consensus 245 ~~-----------~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g 313 (675)
T TIGR01497 245 GN-----------AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLG 313 (675)
T ss_pred Ch-----------hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCC
Confidence 11 1245667889999999988887777777899999999999999999999999999999999999999
Q ss_pred ccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHH
Q 003468 392 QMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALK 471 (817)
Q Consensus 392 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~ 471 (817)
+|++.+++..+. .....++..+++|+.. ..||.+.|++
T Consensus 314 ~~~v~~~~~~~~-------------------------------~~~~~ll~~aa~~~~~-----------s~hP~a~Aiv 351 (675)
T TIGR01497 314 NRLASEFIPAQG-------------------------------VDEKTLADAAQLASLA-----------DDTPEGKSIV 351 (675)
T ss_pred CeEEEEEEecCC-------------------------------CcHHHHHHHHHHhcCC-----------CCCcHHHHHH
Confidence 999999875320 0112344555556533 2579999999
Q ss_pred HHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccc
Q 003468 472 VMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQL 551 (817)
Q Consensus 472 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~ 551 (817)
.++++.|..... ..+......||++.++++++.+. + ...++||++|.+++.|..
T Consensus 352 ~~a~~~~~~~~~-------------------~~~~~~~~~pf~~~~~~sg~~~~--~--g~~~~kGa~e~i~~~~~~--- 405 (675)
T TIGR01497 352 ILAKQLGIREDD-------------------VQSLHATFVEFTAQTRMSGINLD--N--GRMIRKGAVDAIKRHVEA--- 405 (675)
T ss_pred HHHHHcCCCccc-------------------cccccceEEEEcCCCcEEEEEEe--C--CeEEEECCHHHHHHHHHh---
Confidence 999876653210 01123467899999887776543 2 357999999999988752
Q ss_pred cCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCC
Q 003468 552 LDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRD 631 (817)
Q Consensus 552 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d 631 (817)
+|... ...+.+.+++++++|.|++++|+. .+++|+++++|
T Consensus 406 -~g~~~------~~~~~~~~~~~a~~G~r~l~va~~---------------------------------~~~lG~i~l~D 445 (675)
T TIGR01497 406 -NGGHI------PTDLDQAVDQVARQGGTPLVVCED---------------------------------NRIYGVIYLKD 445 (675)
T ss_pred -cCCCC------cHHHHHHHHHHHhCCCeEEEEEEC---------------------------------CEEEEEEEecc
Confidence 22211 134667788899999999999952 36999999999
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++||+++++|++|+++|++++|+|||+..+|.++|+++|+.. +++|++|
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------------------v~a~~~P 494 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------------------FIAEATP 494 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------EEcCCCH
Confidence 999999999999999999999999999999999999999942 7899999
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAF 791 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 791 (817)
++|.++++.+|+.|+.|+|+|||.||+|||++|||||||| +|++.++++||++++++|++.|++++++||+++-+...+
T Consensus 495 edK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~ 573 (675)
T TIGR01497 495 EDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGAL 573 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHH
Q 003468 792 IRYGFCHLENHCL 804 (817)
Q Consensus 792 i~~~~~~n~~~~~ 804 (817)
..|.++-+++--+
T Consensus 574 ~t~~~~~~~~~~~ 586 (675)
T TIGR01497 574 TTFSIANDVAKYF 586 (675)
T ss_pred heeeecccHHHHH
Confidence 9999877765433
No 21
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-84 Score=678.23 Aligned_cols=653 Identities=29% Similarity=0.403 Sum_probs=522.3
Q ss_pred CCCccccccccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHH
Q 003468 16 KESSNEETFPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSF 95 (817)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ 95 (817)
.++.+++..+--..+++++.+.|.... .|||.+|+++|+++||+|++..+ +.+.+..|+--|.+|+.|+.-.+|++..
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~-~GLt~~E~~eRlk~fG~NkleEk-ken~~lKFl~Fm~~PlswVMEaAAimA~ 85 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTR-EGLTSDEVEERLKIFGPNKLEEK-KESKFLKFLGFMWNPLSWVMEAAAIMAI 85 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCC-CCCchHHHHHHHHhhCchhhhhh-hhhHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 355666666777789999999999875 49999999999999999999964 4566667778888999999999999877
Q ss_pred HHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEE
Q 003468 96 VLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIV 175 (817)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII 175 (817)
.+.- + .....+|.....|...+++|+.+++.+|+++.++.+.|++...+++.|+|||+| .++.+++|||||||
T Consensus 86 ~Lan--g----~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw-~E~eAs~lVPGDIl 158 (942)
T KOG0205|consen 86 GLAN--G----GGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKW-SEQEASILVPGDIL 158 (942)
T ss_pred HHhc--C----CCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCee-eeeeccccccCcee
Confidence 6642 1 112247888888888899999999999999999999999988899999999999 99999999999999
Q ss_pred EecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccch
Q 003468 176 ELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEI 255 (817)
Q Consensus 176 ~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~ 255 (817)
.++.|++||||++|++ ...+.||+|.|||||.||.|.++ +.+|+||.|.+|++.++|++||.+|+.
T Consensus 159 sik~GdIiPaDaRLl~--gD~LkiDQSAlTGESLpvtKh~g------------d~vfSgSTcKqGE~eaVViATg~~TF~ 224 (942)
T KOG0205|consen 159 SIKLGDIIPADARLLE--GDPLKIDQSALTGESLPVTKHPG------------DEVFSGSTCKQGEIEAVVIATGVHTFF 224 (942)
T ss_pred eeccCCEecCccceec--CCccccchhhhcCCccccccCCC------------CceecccccccceEEEEEEEeccceee
Confidence 9999999999999998 45899999999999999999997 459999999999999999999999999
Q ss_pred hhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHH
Q 003468 256 GKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALA 335 (817)
Q Consensus 256 g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll 335 (817)
|+-+.++... .....+++.++.+.++++..+.+..++.+++.+... ...+ .........++
T Consensus 225 GkAA~LVdst---~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q-~R~~---------------r~~i~nLlvll 285 (942)
T KOG0205|consen 225 GKAAHLVDST---NQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQ-HRLY---------------RDGIDNLLVLL 285 (942)
T ss_pred hhhHHhhcCC---CCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhh-hhhh---------------hhhhhheheee
Confidence 9999988774 456789999999888776655444433333322111 0000 11111223344
Q ss_pred hhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEE--EEEeCCcCCccceeee
Q 003468 336 VAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTK--LVAVGSRAGTLRSFNV 413 (817)
Q Consensus 336 v~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~--~~~~~~~~~~~~~~~~ 413 (817)
+..+|.++|..++..+++++.||+++|.++++++++|.|+.+|++|+|||||||.|+++|.+ +... +
T Consensus 286 IGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~-----------v 354 (942)
T KOG0205|consen 286 IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF-----------V 354 (942)
T ss_pred ecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee-----------e
Confidence 55599999999999999999999999999999999999999999999999999999999977 2111 1
Q ss_pred cCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchh
Q 003468 414 QGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPED 493 (817)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~ 493 (817)
.+ . ++....+.. |-.+..+ -.+..|.|++.....
T Consensus 355 ~g--v---------------~~D~~~L~A----~rAsr~e--------n~DAID~A~v~~L~d----------------- 388 (942)
T KOG0205|consen 355 KG--V---------------DKDDVLLTA----ARASRKE--------NQDAIDAAIVGMLAD----------------- 388 (942)
T ss_pred cC--C---------------ChHHHHHHH----HHHhhhc--------ChhhHHHHHHHhhcC-----------------
Confidence 11 1 111111111 1112222 135778888765432
Q ss_pred hhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHH
Q 003468 494 VLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQE 573 (817)
Q Consensus 494 ~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 573 (817)
+......++.++.+||++..||.+..+.+++|+.....|||||.|++.|+. +++.++.+...+++
T Consensus 389 ----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~ 453 (942)
T KOG0205|consen 389 ----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDK 453 (942)
T ss_pred ----HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHH
Confidence 112345677889999999999999999999999999999999999999973 33456778889999
Q ss_pred HHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEE
Q 003468 574 MSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMV 653 (817)
Q Consensus 574 ~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~ 653 (817)
|+++|+|.+++|++..++...... ..-..|+|+.-+-||+|.+..++|++....|+.|.|
T Consensus 454 ~AeRGlRSLgVArq~v~e~~~~~~--------------------g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkm 513 (942)
T KOG0205|consen 454 FAERGLRSLAVARQEVPEKTKESP--------------------GGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 513 (942)
T ss_pred HHHhcchhhhhhhhccccccccCC--------------------CCCcccccccccCCCCccchHHHHHHHHhccceeee
Confidence 999999999999987765321111 234679999999999999999999999999999999
Q ss_pred ECCCCHhhHHHHHHHhCCCCCCc---ccc----ccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCC
Q 003468 654 ITGDNKNTAEAICREIGVFGAHE---DIS----SQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGE 726 (817)
Q Consensus 654 ~TGd~~~~a~~ia~~~gi~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~ 726 (817)
+|||...-++..++++|+-.+-. .+. ...+.+.+.+++-+ +..-|+.+.|++|.++|+.||++++
T Consensus 514 itgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie--------~adgfAgVfpehKy~iV~~Lq~r~h 585 (942)
T KOG0205|consen 514 ITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIE--------KADGFAGVFPEHKYEIVKILQERKH 585 (942)
T ss_pred ecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhh--------hccCccccCHHHHHHHHHHHhhcCc
Confidence 99999999999999999843210 000 11222222222211 2335778899999999999999999
Q ss_pred EEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHH
Q 003468 727 VVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSL 806 (817)
Q Consensus 727 ~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 806 (817)
.++|+|||.||+|+|+.||+|||+. .+++.|+.++|+|++.+.++-|..++..+|.+|+|++.+..|.++..+-.++.+
T Consensus 586 i~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gf 664 (942)
T KOG0205|consen 586 IVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF 664 (942)
T ss_pred eecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHH
Confidence 9999999999999999999999999 899999999999999999999999999999999999999999998877766555
Q ss_pred Hhhhc
Q 003468 807 ELNLD 811 (817)
Q Consensus 807 ~~~~~ 811 (817)
++..+
T Consensus 665 ml~al 669 (942)
T KOG0205|consen 665 MLIAL 669 (942)
T ss_pred HHHHH
Confidence 44443
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-80 Score=695.18 Aligned_cols=511 Identities=30% Similarity=0.438 Sum_probs=430.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEec-CCccceeeecCCccCCcEEEecCCCcccccEEEE
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTR-DGKKIPSLSAKELVPGDIVELKVGDKVPADMRLL 190 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r-~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll 190 (817)
+|.++..+++++.++.+++.+...|++++++.|.++.|+++++++ ||++ ++||.++|++||+|.|+|||+||+||+|+
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~-~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEE-EEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcE-EEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 346677888888899999999999999999999999999997776 5654 89999999999999999999999999999
Q ss_pred eecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCC
Q 003468 191 RLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEE 270 (817)
Q Consensus 191 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 270 (817)
+ |...||||+|||||.||.|.++ +.||+||.+.+|....+|+++|.+|.+++|.++++++ +..
T Consensus 252 ~---G~s~vDeS~iTGEs~PV~k~~G------------d~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~A--q~~ 314 (713)
T COG2217 252 S---GSSSVDESMLTGESLPVEKKPG------------DEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEA--QSS 314 (713)
T ss_pred e---CcEEeecchhhCCCCCEecCCC------------CEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHH--hhC
Confidence 5 7779999999999999999997 4699999999999999999999999999999999999 888
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHH
Q 003468 271 DTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTC 350 (817)
Q Consensus 271 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~ 350 (817)
++|.|+..|+++.++++.+++++++.+++|+++.. .+| ...+..++++++++|||+|.+++|++
T Consensus 315 Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~-----~~~-----------~~a~~~a~avLVIaCPCALgLAtP~a 378 (713)
T COG2217 315 KAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG-----GDW-----------ETALYRALAVLVIACPCALGLATPTA 378 (713)
T ss_pred CchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-----CcH-----------HHHHHHHHhheeeeCccHHHhHHHHH
Confidence 99999999999999999888888888876654321 112 34678999999999999999999999
Q ss_pred HHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCC
Q 003468 351 LALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPV 430 (817)
Q Consensus 351 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (817)
+..++.+.+++|+++|+..++|.++++|+++||||||||+|+|.|.++...+.
T Consensus 379 i~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--------------------------- 431 (713)
T COG2217 379 ILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--------------------------- 431 (713)
T ss_pred HHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC---------------------------
Confidence 99999999999999999999999999999999999999999999999886431
Q ss_pred CCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEe
Q 003468 431 GRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFAT 510 (817)
Q Consensus 431 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 510 (817)
.+..+..++. ++-. .+.||...|+++.++..|..... ....
T Consensus 432 --~e~~~L~laA--alE~------------~S~HPiA~AIv~~a~~~~~~~~~-----------------------~~~~ 472 (713)
T COG2217 432 --DEDELLALAA--ALEQ------------HSEHPLAKAIVKAAAERGLPDVE-----------------------DFEE 472 (713)
T ss_pred --CHHHHHHHHH--HHHh------------cCCChHHHHHHHHHHhcCCCCcc-----------------------ceee
Confidence 0112222222 2211 24689999999998876632110 0111
Q ss_pred eccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccc
Q 003468 511 LEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDL 590 (817)
Q Consensus 511 ~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~ 590 (817)
+| .+.+...+ +| ..+.-|++..+.+.-. ..+. ..+..+.+..+|..++.++.
T Consensus 473 i~----G~Gv~~~v---~g--~~v~vG~~~~~~~~~~----------~~~~-----~~~~~~~~~~~G~t~v~va~---- 524 (713)
T COG2217 473 IP----GRGVEAEV---DG--ERVLVGNARLLGEEGI----------DLPL-----LSERIEALESEGKTVVFVAV---- 524 (713)
T ss_pred ec----cCcEEEEE---CC--EEEEEcCHHHHhhcCC----------Cccc-----hhhhHHHHHhcCCeEEEEEE----
Confidence 11 22222222 12 5566788877654211 0110 23445667778877666663
Q ss_pred ccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC
Q 003468 591 REFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
|..++|+++++|++|++++++|++|++.|++++|+|||+..+|.++|+++|
T Consensus 525 -----------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lG 575 (713)
T COG2217 525 -----------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG 575 (713)
T ss_pred -----------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 346999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 671 VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 671 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
|.. +++.+.|++|.++|+.+|.+|+.|+|+|||.||+|+|.+|||||||
T Consensus 576 Id~-------------------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm 624 (713)
T COG2217 576 IDE-------------------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM 624 (713)
T ss_pred hHh-------------------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee
Confidence 953 6788999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 751 g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
| +|+|+|+++||+++++|++..++.+++.+|+++++||+++.|.|.+|...+...+++++
T Consensus 625 G-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l 684 (713)
T COG2217 625 G-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLL 684 (713)
T ss_pred c-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9 79999999999999999999999999999999999999999999999988877776543
No 23
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.6e-82 Score=731.27 Aligned_cols=730 Identities=22% Similarity=0.222 Sum_probs=555.6
Q ss_pred HHhhcCCCccCCCCCCC---HHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHH
Q 003468 54 RREIYGYNELEKHEGTS---IFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVG 130 (817)
Q Consensus 54 r~~~~G~N~~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~ 130 (817)
+...|-.|.+...|++. +++.+++||.++.+++|++.++++++. +. ++..|...+++++++.++++.+
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~--------~~~~~~~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS--------PFNPYTTLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc--------ccCccceeeceeeeehHHHHHH
Confidence 55689999999888864 799999999999999999999999987 32 2335667778888888899999
Q ss_pred HHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeec--CCeEEEeecCCCCCc
Q 003468 131 IWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLT--SSTVRVEQGSLTGES 208 (817)
Q Consensus 131 ~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~--~g~~~Vdes~LTGEs 208 (817)
.++++|+.+....++ ..++.|.|++...++..|++|+|||+|.+..++.+|||.+|+.++ +|.|+|++++|+||+
T Consensus 99 ~~eD~rR~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEt 175 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGET 175 (1151)
T ss_pred HHhhhhhhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCcc
Confidence 999999988777665 457889886442389999999999999999999999999999866 478999999999999
Q ss_pred cccccccccCC--------------------CC--------------CC-CCCccceeeeCcEEeeC-eEEEEEeeeCCc
Q 003468 209 EAVSKTVKTVP--------------------EN--------------SD-IQGKKCMVFAGTTVVNG-TCTCLVTNTGMN 252 (817)
Q Consensus 209 ~pv~K~~~~~~--------------------~~--------------~~-~~~~~~~l~~Gt~v~~g-~~~~~V~~tG~~ 252 (817)
+.+.|+..+.. |+ .. +.++++++++|+.+.+. ++.+.|+.||.+
T Consensus 176 nLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~d 255 (1151)
T KOG0206|consen 176 NLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHD 255 (1151)
T ss_pred ccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCc
Confidence 99888753211 00 01 45678899999999996 789999999999
Q ss_pred cchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-C-CCCcccccchhhHHHHHHH
Q 003468 253 TEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYV-D-GWPRNFKFSFEKCTYYFEI 330 (817)
Q Consensus 253 T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 330 (817)
|++++-... ...+++++++.++.....+..+.++++++..+....+....... . .|..............|..
T Consensus 256 tK~~~n~~~-----~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t 330 (1151)
T KOG0206|consen 256 TKLMQNSGK-----PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLT 330 (1151)
T ss_pred chHHHhcCC-----CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHH
Confidence 999654322 25677888999998877776666666666555443332210000 0 1111101012233556777
Q ss_pred HHHHHhhhccCchHHHHHHHHHhHHHHHh----------hccccccccccccccCCeeEEecCCCcccccCccEEEEEEE
Q 003468 331 AVALAVAAIPEGLPAVITTCLALGTRKMA----------QKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVA 400 (817)
Q Consensus 331 ~i~llv~~iP~~L~~~~~~~~~~~~~~l~----------k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~ 400 (817)
++.++...+|.+|++++.+....++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+
T Consensus 331 ~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi 410 (1151)
T KOG0206|consen 331 FIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSI 410 (1151)
T ss_pred HHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccc
Confidence 78888999999999999998888775442 34688999999999999999999999999999999999999
Q ss_pred eCCcCCccceeeecCC----------------ccCCCCCcccCCC-CCCCCHHHHHHHHHHhHhcCCeeee-cC--CeeE
Q 003468 401 VGSRAGTLRSFNVQGT----------------TYNPSDGRIEGWP-VGRMDANLQTIAKISAVCNDAGVEQ-SG--NHYV 460 (817)
Q Consensus 401 ~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-~~--~~~~ 460 (817)
.|..|+...+-...+. .+.. .......+ ..........+..++++||+..++. .+ ...+
T Consensus 411 ~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y 489 (1151)
T KOG0206|consen 411 NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFED-SRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSY 489 (1151)
T ss_pred cCcccccCCChhhcccCccccccccccccccceecc-chhhccccccccCcchHHHHhhHHhccceeeeccCCCccceee
Confidence 9988764321110000 0000 00111111 1123455678889999999988877 22 3577
Q ss_pred eCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcch
Q 003468 461 ASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVE 540 (817)
Q Consensus 461 ~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e 540 (817)
.+.+|+|.|++..|+..|+....+......-. .......+++++.++|+|.|||||||||.++|+..+|||||+.
T Consensus 490 ~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~-----~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADs 564 (1151)
T KOG0206|consen 490 EAESPDEAALVEAARELGFVFLGRTPDSVTIR-----ELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADS 564 (1151)
T ss_pred ecCCCcHHHHHHHHHhcCceeeeccCceEEEe-----ccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcch
Confidence 88999999999999999998754432211111 1113457899999999999999999999999999999999999
Q ss_pred HHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchh-----hccCCCCccc
Q 003468 541 NLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAH-----QLLLNPTNYS 615 (817)
Q Consensus 541 ~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 615 (817)
+|.+++.. -....++...+++++|+.+|+|++++|||.++++.++.+......+. +.....+.++
T Consensus 565 vI~erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae 634 (1151)
T KOG0206|consen 565 VIFERLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAE 634 (1151)
T ss_pred hhHhhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHH
Confidence 99999874 12345667788999999999999999999998864433333222221 2222234567
Q ss_pred cccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc-----------------
Q 003468 616 SIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI----------------- 678 (817)
Q Consensus 616 ~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~----------------- 678 (817)
.+|+||+++|.+++||+++++++++|+.|++|||++|++|||..+||.+|+..|++...+..+
T Consensus 635 ~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~ 714 (1151)
T KOG0206|consen 635 EIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDAT 714 (1151)
T ss_pred HHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhH
Confidence 899999999999999999999999999999999999999999999999999999997643221
Q ss_pred --------------------------cccccChhHHHHHH------HHhHhhccCCceEEEecCcccHHHHHHHHhc-CC
Q 003468 679 --------------------------SSQSITGKEFMDIH------NQKNYLRQDGGLLFSRAEPRHKQEIVRLLKE-DG 725 (817)
Q Consensus 679 --------------------------~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~-~~ 725 (817)
...+++|+.+.... ........+..+++||++|-||+.+|+..++ .+
T Consensus 715 ~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~ 794 (1151)
T KOG0206|consen 715 AALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLK 794 (1151)
T ss_pred HHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCC
Confidence 11233343333221 1223344568899999999999999999974 48
Q ss_pred CEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHH
Q 003468 726 EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLS 805 (817)
Q Consensus 726 ~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~ 805 (817)
..+++||||+||++|++.|||||..+...-..|..+||+.+....+-.-.. +.|||+.|.|+.+++.|.|++|+.+.++
T Consensus 795 ~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLL-LVHGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 795 AVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLL-LVHGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred ceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhh-eeecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999996653333468899999998844443333 3599999999999999999999999999
Q ss_pred HHhhhccccccC
Q 003468 806 LELNLDKAIFFF 817 (817)
Q Consensus 806 ~~~~~~~~~f~~ 817 (817)
+++|.|.++||+
T Consensus 874 ~fwy~f~~gfSg 885 (1151)
T KOG0206|consen 874 LFWYQFFNGFSG 885 (1151)
T ss_pred HHHhhhcCCCCC
Confidence 999999999985
No 24
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-80 Score=654.52 Aligned_cols=706 Identities=21% Similarity=0.284 Sum_probs=525.3
Q ss_pred HHHhhcCCCccCCCCCC---CHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHH
Q 003468 53 KRREIYGYNELEKHEGT---SIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIV 129 (817)
Q Consensus 53 ~r~~~~G~N~~~~~~~~---~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~ 129 (817)
.++++|-+|.+...|++ .++..+++||+-++++++++.++.+++..+..+ ....+|.....++++.++...+
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig-----~l~ty~~pl~fvl~itl~keav 148 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIG-----YLSTYWGPLGFVLTITLIKEAV 148 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheec-----chhhhhHHHHHHHHHHHHHHHH
Confidence 56778889999877764 478899999999999999999998887665432 1122444444555555555555
Q ss_pred HHHHHhHHHHHHHHHHhhcccceEE-ecCCccceeeecCCccCCcEEEecCCCcccccEEEEeec--CCeEEEeecCCCC
Q 003468 130 GIWQESNAEKALEALKEIQSEQATV-TRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLT--SSTVRVEQGSLTG 206 (817)
Q Consensus 130 ~~~~e~~~~~~~~~l~~~~~~~~~V-~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~--~g~~~Vdes~LTG 206 (817)
+.+++++..+.. +.+..++ -|+|.. ..++++|++||+|.+..+++||||.++|+++ +|.|.|-+-.|+|
T Consensus 149 dd~~r~~rd~~~------Nse~y~~ltr~~~~--~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDG 220 (1051)
T KOG0210|consen 149 DDLKRRRRDREL------NSEKYTKLTRDGTR--REPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDG 220 (1051)
T ss_pred HHHHHHHhhhhh------hhhhheeeccCCcc--cccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCC
Confidence 555555444322 2333444 467754 3499999999999999999999999999977 5789999999999
Q ss_pred CccccccccccCC-----------------------------------CCCCCCCccceeeeCcEEeeCeEEEEEeeeCC
Q 003468 207 ESEAVSKTVKTVP-----------------------------------ENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGM 251 (817)
Q Consensus 207 Es~pv~K~~~~~~-----------------------------------~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~ 251 (817)
|++.+.|-|.+.. +..+..+-.|+++++|.+.+|.+.|+|++||.
T Consensus 221 ETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~ 300 (1051)
T KOG0210|consen 221 ETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGR 300 (1051)
T ss_pred cccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecc
Confidence 9998877654211 01123456799999999999999999999999
Q ss_pred ccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHH
Q 003468 252 NTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIA 331 (817)
Q Consensus 252 ~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (817)
+|.. .++......+-.-+...+|.+.+++..+++++++++...-. +. +.| -..+.++
T Consensus 301 dtRs-----vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g--~~-----~~w-----------yi~~~Rf 357 (1051)
T KOG0210|consen 301 DTRS-----VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG--FG-----SDW-----------YIYIIRF 357 (1051)
T ss_pred cHHH-----HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc--CC-----Cch-----------HHHHHHH
Confidence 9975 34544334445557788888888887777766665543311 11 223 2346677
Q ss_pred HHHHhhhccCchHHHHHHHHHhHHHHHhhc----cccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCc
Q 003468 332 VALAVAAIPEGLPAVITTCLALGTRKMAQK----NALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGT 407 (817)
Q Consensus 332 i~llv~~iP~~L~~~~~~~~~~~~~~l~k~----~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~ 407 (817)
+.++...+|.+|.+.+.++...-...+.++ |.++|+...-|+||+|+++.+|||||||+|.|.+++++.+.-.++.
T Consensus 358 llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~ 437 (1051)
T KOG0210|consen 358 LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSA 437 (1051)
T ss_pred HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccH
Confidence 888889999999999999999888888765 6789999999999999999999999999999999999987544432
Q ss_pred cceeeecC---CccCC---CCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecC--CeeEeCCChhHHHHHHHHHHcCC
Q 003468 408 LRSFNVQG---TTYNP---SDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSG--NHYVASGMPTEAALKVMVEKMGF 479 (817)
Q Consensus 408 ~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~p~e~al~~~~~~~g~ 479 (817)
...-.++. ..+.+ .+......-.......+..+..++++||+..+..++ ...++..+|+|.||+.+.+..|.
T Consensus 438 e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl 517 (1051)
T KOG0210|consen 438 ETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGL 517 (1051)
T ss_pred hHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecce
Confidence 10000000 00111 111111111234556677888899999998877655 67888899999999999999998
Q ss_pred CCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeec-CCcEEEEEeCcchHHHhccccccccCCceee
Q 003468 480 PEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSS-SGNKKLLVKGAVENLLERSSFVQLLDGSVVE 558 (817)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~ 558 (817)
....++....... ........|+++..|||+|+.|||+++|+++ .++...|.|||+..|...-.
T Consensus 518 ~L~~Rd~~~itL~----~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----------- 582 (1051)
T KOG0210|consen 518 KLAKRDRHAITLR----VPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----------- 582 (1051)
T ss_pred EEeecccceEEEe----cCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc-----------
Confidence 7655432211110 1122345788999999999999999999976 68889999999988765432
Q ss_pred cCHHHHHHHHHHHHHHHHhhhceeeeeeecccccc-cccCC----CCCcchhhccCCCCcc-ccccCCeEEEEEeccCCC
Q 003468 559 LDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREF-ETYDG----DEDHPAHQLLLNPTNY-SSIESRLVFVGMVGLRDP 632 (817)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~-~~~~~----~~~~~~~~~~~~~~~~-~~~e~~l~~lG~~~~~d~ 632 (817)
-+ +++++...+|+++|+|++.+|.|.+.++. +.++. ++-+..++...-.... ..+|.||.++|+.|.||+
T Consensus 583 ~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDk 658 (1051)
T KOG0210|consen 583 YN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDK 658 (1051)
T ss_pred cc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHH
Confidence 12 46777788999999999999999998762 22221 1111111000000111 257899999999999999
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccc------------------------cccccChhHH
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDI------------------------SSQSITGKEF 688 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------------------~~~~~~~~~~ 688 (817)
++++++.+++.||+|||++||+|||..+||..+|+..++...+..+ ...+++|+.+
T Consensus 659 LQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 659 LQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESL 738 (1051)
T ss_pred HhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchH
Confidence 9999999999999999999999999999999999999997654432 1245666655
Q ss_pred HHH-----HHHhHhhccCCceEEEecCcccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhc
Q 003468 689 MDI-----HNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEAS 762 (817)
Q Consensus 689 ~~~-----~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~a 762 (817)
+-. .+..+........++||++|.||+++++.+|+. ++.|+++|||.||+.|+++||+||..-...-..|.-||
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 433 344555667788999999999999999999876 89999999999999999999999975323334578899
Q ss_pred CEEeccCCccHHHHH-HHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhccccccC
Q 003468 763 DMVLADDNFGTIVAA-VGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDKAIFFF 817 (817)
Q Consensus 763 d~vl~~~~~~~i~~~-i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f~~ 817 (817)
|+.+.. |..+.++ +.|||+.|+|..+.-+|.+ .-+++++.+.++|++.|+|
T Consensus 819 DfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfVi--HRGL~Is~~Qavfs~v~yF 870 (1051)
T KOG0210|consen 819 DFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVI--HRGLIISTMQAVFSSVFYF 870 (1051)
T ss_pred cccHHH--HHHHHHHhhccccchHHHHHHHHHHHH--hhhHHHHHHHHHHHHHhhh
Confidence 999987 8888887 5799999999999998887 5688889999999999987
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=9e-77 Score=692.65 Aligned_cols=506 Identities=27% Similarity=0.412 Sum_probs=428.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEe
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLR 191 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~ 191 (817)
.|.++..++++++++.+++.+++.|+++.+++|.++.|++++|+|+|++ ++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~-~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGER-EEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 4667788888899999999999999999999999999999999999998 899999999999999999999999999996
Q ss_pred ecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCC
Q 003468 192 LTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEED 271 (817)
Q Consensus 192 ~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 271 (817)
|.+.||||+|||||.|+.|.++ +.||+||.+.+|.+.++|+++|.+|.+|+|.++++++ +.++
T Consensus 284 ---g~~~vdes~lTGEs~Pv~k~~G------------d~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a--~~~k 346 (741)
T PRK11033 284 ---PFASFDESALTGESIPVERATG------------EKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEA--EERR 346 (741)
T ss_pred ---CcEEeecccccCCCCCEecCCC------------CeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHh--hccC
Confidence 6789999999999999999987 5699999999999999999999999999999999998 7778
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHH
Q 003468 272 TPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCL 351 (817)
Q Consensus 272 ~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~ 351 (817)
+|+++.+++++.+++++++++++++|+++...+. .+| ...+..++++++++|||+|++++|+++
T Consensus 347 ~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~-----~~~-----------~~~i~~a~svlviacPcaL~latP~a~ 410 (741)
T PRK11033 347 APIERFIDRFSRIYTPAIMLVALLVILVPPLLFA-----APW-----------QEWIYRGLTLLLIGCPCALVISTPAAI 410 (741)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CCH-----------HHHHHHHHHHHHHhchhhhhhhhHHHH
Confidence 9999999999999999999999988887633221 112 335678899999999999999999999
Q ss_pred HhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCC
Q 003468 352 ALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVG 431 (817)
Q Consensus 352 ~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (817)
..+..+++|+|+++|+..++|+|+++|+||||||||||+|+|+|.+++..+. +
T Consensus 411 ~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------~------------- 463 (741)
T PRK11033 411 TSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG--------------I------------- 463 (741)
T ss_pred HHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC--------------C-------------
Confidence 9999999999999999999999999999999999999999999999875321 0
Q ss_pred CCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEee
Q 003468 432 RMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATL 511 (817)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 511 (817)
... .++..++.. +. .+.||.+.|++++++..+.. +
T Consensus 464 -~~~---~~l~~aa~~-----e~------~s~hPia~Ai~~~a~~~~~~------------------------------~ 498 (741)
T PRK11033 464 -SES---ELLALAAAV-----EQ------GSTHPLAQAIVREAQVRGLA------------------------------I 498 (741)
T ss_pred -CHH---HHHHHHHHH-----hc------CCCCHHHHHHHHHHHhcCCC------------------------------C
Confidence 011 122222111 11 14689999999998765542 3
Q ss_pred ccCCCCceEE-EEEee-cCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecc
Q 003468 512 EFDRDRKSMG-VLVNS-SSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDD 589 (817)
Q Consensus 512 ~F~s~~k~ms-vvv~~-~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~ 589 (817)
||.++++.+. .-++. .+|.. +..|+++.+.+ ++ +.+.+.++.+..+|+|++++|+
T Consensus 499 ~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~--- 555 (741)
T PRK11033 499 PEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR--- 555 (741)
T ss_pred CCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE---
Confidence 4445555442 11221 23332 34578776643 11 2244456778899999999985
Q ss_pred cccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh
Q 003468 590 LREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI 669 (817)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 669 (817)
|..++|+++|+|++||+++++|++|+++|++++|+|||+..++..+|+++
T Consensus 556 ------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 556 ------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred ------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 24699999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 670 GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 670 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+. .+++..|++|..+++.+++. +.|+|+|||.||+|||+.||||||
T Consensus 606 gi~--------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia 652 (741)
T PRK11033 606 GID--------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIA 652 (741)
T ss_pred CCC--------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEE
Confidence 994 24568899999999999965 589999999999999999999999
Q ss_pred eCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhh
Q 003468 750 MGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNL 810 (817)
Q Consensus 750 mg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 810 (817)
|| ++++.++++||+++.++++.++..+++.||++++||++++.|.+.+|+..+...++++
T Consensus 653 ~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~ 712 (741)
T PRK11033 653 MG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGI 712 (741)
T ss_pred ec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99 7999999999999999999999999999999999999999999999988777666543
No 26
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-76 Score=648.77 Aligned_cols=525 Identities=24% Similarity=0.348 Sum_probs=429.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCC
Q 003468 116 PLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSS 195 (817)
Q Consensus 116 ~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g 195 (817)
+..++.++.+..+++.....++..++.+|..+.|.++.++.+|+..++|+.+.|++||+|+|.||++||+||++++ |
T Consensus 344 ~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~---G 420 (951)
T KOG0207|consen 344 SPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD---G 420 (951)
T ss_pred cHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEe---C
Confidence 4444445555556666666666788999999999999999999623899999999999999999999999999995 7
Q ss_pred eEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhH
Q 003468 196 TVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLK 275 (817)
Q Consensus 196 ~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~ 275 (817)
+++||||++|||+.||.|+++ ..|.+||++.+|+....++++|.+|.+++|.++++++ +..++|+|
T Consensus 421 ss~VDEs~iTGEs~PV~Kk~g------------s~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEA--Q~sKapiQ 486 (951)
T KOG0207|consen 421 SSEVDESLITGESMPVPKKKG------------STVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEA--QLSKAPIQ 486 (951)
T ss_pred ceeechhhccCCceecccCCC------------CeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHH--HcccchHH
Confidence 889999999999999999987 5799999999999999999999999999999999999 78899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHH
Q 003468 276 KKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGT 355 (817)
Q Consensus 276 ~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~ 355 (817)
+.+|+++.++++++++++++.|++|++..... ..++..+ +..+...|..++++++++|||+|+++.|++.+.+.
T Consensus 487 q~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~---~~~~~~~---~~~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 487 QLADKIAGYFVPVVIVLSLATFVVWILIGKIV---FKYPRSF---FDAFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred HHHHHhhhcCCchhhHHHHHHHHHHHHHcccc---ccCcchh---hHHHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 99999999999999999999988887654210 1111111 36667889999999999999999999999999999
Q ss_pred HHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCH
Q 003468 356 RKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDA 435 (817)
Q Consensus 356 ~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (817)
...+++|+|+|..+.+|.+.++++|+||||||||+|+|.|.++....+. ....
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------------------------~~~~ 613 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------------------------ISLK 613 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc---------------------------ccHH
Confidence 9999999999999999999999999999999999999999998875421 0011
Q ss_pred HHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCC
Q 003468 436 NLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDR 515 (817)
Q Consensus 436 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s 515 (817)
....+.. +.-. .+.||...|++.+++......... ..+..-.|.-
T Consensus 614 e~l~~v~--a~Es------------~SeHPig~AIv~yak~~~~~~~~~---------------------~~~~~~~~pg 658 (951)
T KOG0207|consen 614 EALALVA--AMES------------GSEHPIGKAIVDYAKEKLVEPNPE---------------------GVLSFEYFPG 658 (951)
T ss_pred HHHHHHH--HHhc------------CCcCchHHHHHHHHHhcccccCcc---------------------ccceeecccC
Confidence 1111111 1111 146899999999999876321100 0111111222
Q ss_pred CCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccc
Q 003468 516 DRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFET 595 (817)
Q Consensus 516 ~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~ 595 (817)
+.+...+.+. ++. .+-|.-+.+...- .. .+ +.+++.+++....|..+..++.
T Consensus 659 ~g~~~~~~~~---~~~--i~iGN~~~~~r~~--------~~--~~----~~i~~~~~~~e~~g~tvv~v~v--------- 710 (951)
T KOG0207|consen 659 EGIYVTVTVD---GNE--VLIGNKEWMSRNG--------CS--IP----DDILDALTESERKGQTVVYVAV--------- 710 (951)
T ss_pred CCcccceEEe---eeE--EeechHHHHHhcC--------CC--Cc----hhHHHhhhhHhhcCceEEEEEE---------
Confidence 2222222222 111 5667766665431 11 11 2366777778888988888874
Q ss_pred cCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCC
Q 003468 596 YDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH 675 (817)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~ 675 (817)
|.+++|+++++|++|+|+..+|+.|++.|++++|+|||+..+|+++|+++|+.
T Consensus 711 ------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--- 763 (951)
T KOG0207|consen 711 ------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--- 763 (951)
T ss_pred ------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---
Confidence 44699999999999999999999999999999999999999999999999963
Q ss_pred ccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCcc
Q 003468 676 EDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGT 755 (817)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~ 755 (817)
.||+...|+||.++|+.+|+.+..|+|+|||.||+|+|.+|||||||| .|+
T Consensus 764 ----------------------------~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs 814 (951)
T KOG0207|consen 764 ----------------------------NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGS 814 (951)
T ss_pred ----------------------------eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-ccc
Confidence 389999999999999999999999999999999999999999999999 789
Q ss_pred HHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhh
Q 003468 756 EVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELN 809 (817)
Q Consensus 756 ~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 809 (817)
++|.++||+|++.|++..++.+++.+|++++|||.++.|.+.+|+..+...+..
T Consensus 815 ~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagv 868 (951)
T KOG0207|consen 815 DVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGV 868 (951)
T ss_pred HHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheec
Confidence 999999999999999999999999999999999999999999999866554443
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=5.7e-75 Score=657.68 Aligned_cols=480 Identities=41% Similarity=0.591 Sum_probs=419.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHh--hcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEE
Q 003468 121 LILIVNAIVGIWQESNAEKALEALKE--IQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVR 198 (817)
Q Consensus 121 ~~~i~~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~ 198 (817)
++++++.+++.++++++++.++.+.+ ..+++++|+|+| + +.|++++|+|||+|.+++||+|||||+|++ |.+.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~-~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~ 78 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-W-KEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCF 78 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-e-EEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEE
Confidence 34566677899999999999999988 788899999999 6 899999999999999999999999999995 6899
Q ss_pred EeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHH
Q 003468 199 VEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKL 278 (817)
Q Consensus 199 Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l 278 (817)
||||+|||||.|+.|.++ +.+++||.+.+|++.+.|+++|.+|..+++...+..+ ...++++++++
T Consensus 79 vdes~LTGEs~pv~k~~g------------~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~--~~~k~~~~~~~ 144 (499)
T TIGR01494 79 VDESNLTGESVPVLKTAG------------DAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTG--FETKTPLQPKL 144 (499)
T ss_pred EEcccccCCCCCeeeccC------------CccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhc--CCCCCchHHHH
Confidence 999999999999999986 4589999999999999999999999999999998877 55578999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHH
Q 003468 279 NQFG-EVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRK 357 (817)
Q Consensus 279 ~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~ 357 (817)
+++. .+++++++++++++++++...+. .. ..+...+..++++++++|||+|++++++++..+..+
T Consensus 145 ~~~~~~~~~~~~~~la~~~~~~~~~~~~-----~~---------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~ 210 (499)
T TIGR01494 145 DRLSDIIFILFVLLIALAVFLFWAIGLW-----DP---------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDAR 210 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cc---------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 9998 67777777777777666543211 00 012456788999999999999999999999999999
Q ss_pred HhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHH
Q 003468 358 MAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANL 437 (817)
Q Consensus 358 l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (817)
|+++|+++|+++++|+||+++++|||||||||+|+|+|.+++..+.
T Consensus 211 ~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------- 256 (499)
T TIGR01494 211 LAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------- 256 (499)
T ss_pred HHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------------
Confidence 9999999999999999999999999999999999999999875320
Q ss_pred HHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCC
Q 003468 438 QTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDR 517 (817)
Q Consensus 438 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~ 517 (817)
.+.++||.+.|++.+++.. .+...||++.+
T Consensus 257 ---------------------~~~s~hp~~~ai~~~~~~~-----------------------------~~~~~~f~~~~ 286 (499)
T TIGR01494 257 ---------------------EYLSGHPDERALVKSAKWK-----------------------------ILNVFEFSSVR 286 (499)
T ss_pred ---------------------CcCCCChHHHHHHHHhhhc-----------------------------CcceeccCCCC
Confidence 0114689999999887531 12457999999
Q ss_pred ceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccC
Q 003468 518 KSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYD 597 (817)
Q Consensus 518 k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~ 597 (817)
++|+++++..++ .++||+++.++++|.. +.+..+.++.+|+|++++|++.
T Consensus 287 ~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a~~~--------- 336 (499)
T TIGR01494 287 KRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVASKE--------- 336 (499)
T ss_pred ceEEEEEecCCc---EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEEECC---------
Confidence 999999985222 4789999999998852 1233456788999999999752
Q ss_pred CCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcc
Q 003468 598 GDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHED 677 (817)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~ 677 (817)
.++|+++++|++|++++++|+.|+++|++++|+|||+..++..+|+++|+
T Consensus 337 ------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------ 386 (499)
T TIGR01494 337 ------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------ 386 (499)
T ss_pred ------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------
Confidence 48999999999999999999999999999999999999999999999986
Q ss_pred ccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH
Q 003468 678 ISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV 757 (817)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ 757 (817)
+++.+|++|.++++.+|..|+.|+|+|||.||+|||++||||||||
T Consensus 387 ----------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~------ 432 (499)
T TIGR01494 387 ----------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG------ 432 (499)
T ss_pred ----------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc------
Confidence 3678999999999999999999999999999999999999999997
Q ss_pred HHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhc
Q 003468 758 AKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLD 811 (817)
Q Consensus 758 ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 811 (817)
++++||+++.++++..+..++.+||++++++++++.|.+++|+..+...+++.+
T Consensus 433 a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~ 486 (499)
T TIGR01494 433 AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV 486 (499)
T ss_pred hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999998877776544
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=3.2e-74 Score=656.98 Aligned_cols=515 Identities=26% Similarity=0.375 Sum_probs=426.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCC-ccceeeecCCccCCcEEEecCCCcccccEEEE
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDG-KKIPSLSAKELVPGDIVELKVGDKVPADMRLL 190 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g-~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll 190 (817)
.|.+++.++++++++.+++.++++|+++.+++|.+..|+.++|+|+| ++ ++|++++|+|||+|.|++||+|||||+|+
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi 95 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSE-EEVPVEELQVGDIVIVRPGERIPVDGVVI 95 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEeccceEEE
Confidence 56788899999999999999999999999999999999999999996 87 89999999999999999999999999999
Q ss_pred eecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCC
Q 003468 191 RLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEE 270 (817)
Q Consensus 191 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 270 (817)
+ |.+.||||+|||||.|+.|.++ +.+|+||.+.+|+++++|++||.+|.+|++.+++.++ ..+
T Consensus 96 ~---g~~~vdes~lTGEs~pv~k~~g------------~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~--~~~ 158 (556)
T TIGR01525 96 S---GESEVDESALTGESMPVEKKEG------------DEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA--QSS 158 (556)
T ss_pred e---cceEEeehhccCCCCCEecCCc------------CEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH--hhc
Confidence 5 6789999999999999999976 5799999999999999999999999999999999887 677
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHH
Q 003468 271 DTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTC 350 (817)
Q Consensus 271 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~ 350 (817)
++|+++.+++++.+++++++++++++|++++... .+ ..+..++++++++|||+|++++|++
T Consensus 159 ~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------~~------------~~~~~~~~vlv~~~P~al~l~~~~~ 219 (556)
T TIGR01525 159 KAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------AL------------GALYRALAVLVVACPCALGLATPVA 219 (556)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cc------------hHHHHHHHHHhhccccchhehhHHH
Confidence 8999999999999999988888888887764321 00 3567889999999999999999999
Q ss_pred HHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCC
Q 003468 351 LALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPV 430 (817)
Q Consensus 351 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (817)
+..+.++++++|+++|+++++|+||++|++|||||||||+|+|+|.++...+.. .
T Consensus 220 ~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------~----------- 274 (556)
T TIGR01525 220 ILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA--------------S----------- 274 (556)
T ss_pred HHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC--------------C-----------
Confidence 999999999999999999999999999999999999999999999998754310 0
Q ss_pred CCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEe
Q 003468 431 GRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFAT 510 (817)
Q Consensus 431 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 510 (817)
... ..++..++.+.. ...||.+.|+++++++.|..... + + ....
T Consensus 275 -~~~---~~~l~~a~~~e~-----------~~~hp~~~Ai~~~~~~~~~~~~~------~--------------~-~~~~ 318 (556)
T TIGR01525 275 -ISE---EELLALAAALEQ-----------SSSHPLARAIVRYAKKRGLELPK------Q--------------E-DVEE 318 (556)
T ss_pred -ccH---HHHHHHHHHHhc-----------cCCChHHHHHHHHHHhcCCCccc------c--------------c-CeeE
Confidence 001 112222111111 13689999999999876653210 0 0 0011
Q ss_pred eccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccc
Q 003468 511 LEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDL 590 (817)
Q Consensus 511 ~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~ 590 (817)
++ .+++. .+++|+++..+..|++... ++. .. ....+.+..+..+|+|++.++.
T Consensus 319 ~~----~~gi~-----------~~~~g~~~~~lg~~~~~~~-~~~--~~-----~~~~~~~~~~~~~g~~~~~v~~---- 371 (556)
T TIGR01525 319 VP----GKGVE-----------ATVDGQEEVRIGNPRLLEL-AAE--PI-----SASPDLLNEGESQGKTVVFVAV---- 371 (556)
T ss_pred ec----CCeEE-----------EEECCeeEEEEecHHHHhh-cCC--Cc-----hhhHHHHHHHhhCCcEEEEEEE----
Confidence 11 12222 2233333333333332210 111 01 1123455677889999988873
Q ss_pred ccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcC-CeEEEECCCCHhhHHHHHHHh
Q 003468 591 REFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAG-IRVMVITGDNKNTAEAICREI 669 (817)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~g-i~v~~~TGd~~~~a~~ia~~~ 669 (817)
|.+++|.+.++|+++|+++++|++|+++| ++++|+|||+..++..+++++
T Consensus 372 -----------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 372 -----------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred -----------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 34699999999999999999999999999 999999999999999999999
Q ss_pred CCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 670 GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 670 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+.. +|++..|++|.++++.++..++.|+|+|||.||++|++.||+||+
T Consensus 423 gi~~-------------------------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia 471 (556)
T TIGR01525 423 GIDE-------------------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIA 471 (556)
T ss_pred CCCe-------------------------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEE
Confidence 9942 677889999999999999999999999999999999999999999
Q ss_pred eCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 750 MGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 750 mg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
|| ++++.+++.||+++.+++++.+..++++||+++++|++++.|.+.+|+..+...+++++.
T Consensus 472 ~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~ 533 (556)
T TIGR01525 472 MG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLP 533 (556)
T ss_pred eC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99 789999999999999999999999999999999999999999999999998887776653
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.1e-73 Score=645.63 Aligned_cols=495 Identities=28% Similarity=0.419 Sum_probs=416.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEe
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLR 191 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~ 191 (817)
.|+++..++++++++.+++.++++|+++.+++|.+..+++++|+|+|++ +++++++|+|||+|.|++||+|||||+|++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~ 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSL-EEVAVEELKVGDVVVVKPGERVPVDGVVLS 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEE-EEEEHHHCCCCCEEEEcCCCEeecceEEEe
Confidence 5778888989999999999999999999999999999999999999998 899999999999999999999999999995
Q ss_pred ecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCC
Q 003468 192 LTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEED 271 (817)
Q Consensus 192 ~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 271 (817)
|.+.||||+|||||.|+.|+++ +.+|+||.+.+|++.++|++||.+|.+|++.+++.++ ..++
T Consensus 96 ---g~~~vdes~lTGEs~pv~k~~g------------~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~--~~~~ 158 (536)
T TIGR01512 96 ---GTSTVDESALTGESVPVEKAPG------------DEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA--QSRK 158 (536)
T ss_pred ---CcEEEEecccCCCCCcEEeCCC------------CEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHH--hhCC
Confidence 6789999999999999999986 5799999999999999999999999999999999887 6678
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHH
Q 003468 272 TPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCL 351 (817)
Q Consensus 272 ~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~ 351 (817)
+|+++.+++++.+++++++++++++|+++..+ ..| ...+.+++++++++|||+|++++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----------~~~~~~~~svlv~~~P~aL~la~~~~~ 220 (536)
T TIGR01512 159 AKTQRFIDRFARYYTPVVLAIALAIWLVPGLL-------KRW-----------PFWVYRALVLLVVASPCALVISAPAAY 220 (536)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccc-----------HHHHHHHHHHHhhcCccccccchHHHH
Confidence 99999999999999999888888877765432 112 125677899999999999999999999
Q ss_pred HhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCC
Q 003468 352 ALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVG 431 (817)
Q Consensus 352 ~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (817)
..+.++++++|+++|+++++|++|++|++|||||||||+|+|+|.+++..
T Consensus 221 ~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------ 270 (536)
T TIGR01512 221 LSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------ 270 (536)
T ss_pred HHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------
Confidence 99999999999999999999999999999999999999999999987521
Q ss_pred CCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEee
Q 003468 432 RMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATL 511 (817)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 511 (817)
.++..++.+. . ...||.+.|+++++++.+ .. .....+
T Consensus 271 -------~~l~~a~~~e-----~------~~~hp~~~Ai~~~~~~~~-~~------------------------~~~~~~ 307 (536)
T TIGR01512 271 -------EVLRLAAAAE-----Q------ASSHPLARAIVDYARKRE-NV------------------------ESVEEV 307 (536)
T ss_pred -------HHHHHHHHHh-----c------cCCCcHHHHHHHHHHhcC-CC------------------------cceEEe
Confidence 1111111111 1 136899999999987643 00 001111
Q ss_pred ccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccc
Q 003468 512 EFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLR 591 (817)
Q Consensus 512 ~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~ 591 (817)
| .+.+...+ +|. .+..|+++.+.+.. . ..+..+|.+++.++
T Consensus 308 ~----g~gi~~~~---~g~--~~~ig~~~~~~~~~------------~------------~~~~~~~~~~~~v~------ 348 (536)
T TIGR01512 308 P----GEGVRAVV---DGG--EVRIGNPRSLEAAV------------G------------ARPESAGKTIVHVA------ 348 (536)
T ss_pred c----CCeEEEEE---CCe--EEEEcCHHHHhhcC------------C------------cchhhCCCeEEEEE------
Confidence 1 12222222 222 23457765443210 0 02344565554443
Q ss_pred cccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCC-eEEEECCCCHhhHHHHHHHhC
Q 003468 592 EFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGI-RVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi-~v~~~TGd~~~~a~~ia~~~g 670 (817)
.|..++|.+.++|+++|+++++|++|+++|+ +++|+|||+..++..+++++|
T Consensus 349 ---------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lg 401 (536)
T TIGR01512 349 ---------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG 401 (536)
T ss_pred ---------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcC
Confidence 3567999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 671 VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 671 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
+.. +|++..|++|..+++.++..++.|+|+|||.||++|++.||+||+|
T Consensus 402 i~~-------------------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~ 450 (536)
T TIGR01512 402 IDE-------------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM 450 (536)
T ss_pred Chh-------------------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe
Confidence 942 4567889999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 751 g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
|.++++.++++||+++.++++..+.++++.||+++++|++++.|++.+|+..+...+++++.
T Consensus 451 g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~ 512 (536)
T TIGR01512 451 GASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLP 512 (536)
T ss_pred CCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 96688999999999999999999999999999999999999999999998888777766543
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2.2e-72 Score=638.99 Aligned_cols=499 Identities=27% Similarity=0.393 Sum_probs=413.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecC-CccceeeecCCccCCcEEEecCCCcccccEEEE
Q 003468 112 AFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRD-GKKIPSLSAKELVPGDIVELKVGDKVPADMRLL 190 (817)
Q Consensus 112 ~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~-g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll 190 (817)
+|..+..++++++++.+++.+.++|+++.+++|.++.|++++++|+ |.+ ++|++++|+|||+|.|++||+|||||+|+
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~-~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~ 131 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSI-EEVPVALLQPGDIVKVLPGEKIPVDGTVI 131 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEecCceEEE
Confidence 3444555666777788899999999999999999999999999986 555 89999999999999999999999999999
Q ss_pred eecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCC
Q 003468 191 RLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEE 270 (817)
Q Consensus 191 ~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 270 (817)
+ |.+.||||+|||||.|+.|+++ +.+|+||.+.+|.+.++|+++|.+|.+|++.++++++ ..+
T Consensus 132 ~---g~~~vdes~lTGEs~pv~k~~g------------d~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a--~~~ 194 (562)
T TIGR01511 132 E---GESEVDESLVTGESLPVPKKVG------------DPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQA--QQS 194 (562)
T ss_pred E---CceEEehHhhcCCCCcEEcCCC------------CEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHH--Hhc
Confidence 5 6789999999999999999987 5699999999999999999999999999999999988 777
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHH
Q 003468 271 DTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTC 350 (817)
Q Consensus 271 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~ 350 (817)
++|+++.+++++.++++++++++++.+++|. ..+..++++++++|||+|++++|++
T Consensus 195 k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------------~~~~~~~svlvvacPcaL~la~p~a 250 (562)
T TIGR01511 195 KAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------------FALEFAVTVLIIACPCALGLATPTV 250 (562)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHhccchhhhHHHHH
Confidence 8999999999999999988888877766542 2456789999999999999999999
Q ss_pred HHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCC
Q 003468 351 LALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPV 430 (817)
Q Consensus 351 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (817)
+..+..+++++|+++|++.++|+|+++|+||||||||||+|+|++.++...+..
T Consensus 251 ~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-------------------------- 304 (562)
T TIGR01511 251 IAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-------------------------- 304 (562)
T ss_pred HHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------------------------
Confidence 999999999999999999999999999999999999999999999998653210
Q ss_pred CCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEe
Q 003468 431 GRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFAT 510 (817)
Q Consensus 431 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 510 (817)
....+ +..+.+++.. +.||.+.|+++++++.+...... .....
T Consensus 305 --~~~~~--l~~aa~~e~~------------s~HPia~Ai~~~~~~~~~~~~~~---------------------~~~~~ 347 (562)
T TIGR01511 305 --DRTEL--LALAAALEAG------------SEHPLAKAIVSYAKEKGITLVEV---------------------SDFKA 347 (562)
T ss_pred --CHHHH--HHHHHHHhcc------------CCChHHHHHHHHHHhcCCCcCCC---------------------CCeEE
Confidence 01111 1112222221 35899999999998766532100 00111
Q ss_pred eccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccc
Q 003468 511 LEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDL 590 (817)
Q Consensus 511 ~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~ 590 (817)
+| .+.+...++ | ..+..|+++.+.+.. . .++ .+..+|.+++.++
T Consensus 348 ~~----g~Gi~~~~~---g--~~~~iG~~~~~~~~~--------~--~~~------------~~~~~g~~~~~~~----- 391 (562)
T TIGR01511 348 IP----GIGVEGTVE---G--TKIQLGNEKLLGENA--------I--KID------------GKAEQGSTSVLVA----- 391 (562)
T ss_pred EC----CceEEEEEC---C--EEEEEECHHHHHhCC--------C--CCC------------hhhhCCCEEEEEE-----
Confidence 11 233333332 2 335678877654321 0 011 1234677766554
Q ss_pred ccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC
Q 003468 591 REFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
.|.+++|++.++|++||+++++|++|++.|++++|+|||+..++..+++++|
T Consensus 392 ----------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lg 443 (562)
T TIGR01511 392 ----------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG 443 (562)
T ss_pred ----------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcC
Confidence 3567999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 671 VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 671 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
+. +|++..|++|.++++.++..++.|+|+|||.||++|++.||+||+|
T Consensus 444 i~--------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~ 491 (562)
T TIGR01511 444 IN--------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI 491 (562)
T ss_pred Cc--------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe
Confidence 82 4567889999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHHhhhcc
Q 003468 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLELNLDK 812 (817)
Q Consensus 751 g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 812 (817)
| .+++.+++.||+++.++++..+..+++.||+++++|++++.|.+.+|+..+...+.++.-
T Consensus 492 g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~ 552 (562)
T TIGR01511 492 G-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYP 552 (562)
T ss_pred C-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 9 789999999999999999999999999999999999999999999999877666644433
No 31
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-75 Score=622.97 Aligned_cols=636 Identities=23% Similarity=0.315 Sum_probs=447.8
Q ss_pred CCCCCCCCCccccccccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHH
Q 003468 10 KRGNFDKESSNEETFPAWAKDVEECEEKYGVNPKIGLS-VGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILL 88 (817)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GL~-~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll 88 (817)
+|+..++| .+-+.....+.++....|..+ +|+. ..++.....+||+|+...+.+ +|..+|.+.-..|++.+..
T Consensus 132 ~ry~~~~e---~~~F~~~~fp~~~~~g~~~k~--~G~~~~~~i~~a~~~~G~N~fdi~vP-tF~eLFkE~A~aPfFVFQV 205 (1160)
T KOG0209|consen 132 KRYLYDEE---KGKFSRLTFPTDEPFGYFQKS--TGHEEESEIKLAKHKYGKNKFDIVVP-TFSELFKEHAVAPFFVFQV 205 (1160)
T ss_pred eeEEEccc---ccceeccccCcCCcchhhhhc--cCcchHHHHHHHHHHhcCCccccCCc-cHHHHHHHhccCceeeHhH
Confidence 34444443 223334445666666666655 4666 344555556699999987654 7888888888877776655
Q ss_pred HHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh--cccceEEecCCccceeeec
Q 003468 89 VAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEI--QSEQATVTRDGKKIPSLSA 166 (817)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~--~~~~~~V~r~g~~~~~i~~ 166 (817)
++..+|+ .+. +|+.++.-+++++.-..--.+|+.++ +..++++ .|..+.|.|+++| +.+.+
T Consensus 206 FcvgLWC----LDe---------yWYySlFtLfMli~fE~tlV~Qrm~~---lse~R~Mg~kpy~I~v~R~kKW-~~l~s 268 (1160)
T KOG0209|consen 206 FCVGLWC----LDE---------YWYYSLFTLFMLIAFEATLVKQRMRT---LSEFRTMGNKPYTINVYRNKKW-VKLMS 268 (1160)
T ss_pred HhHHHHH----hHH---------HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCceEEEEEecCcc-eeccc
Confidence 5554444 332 67777777666665444444555444 4444443 4557899999999 89999
Q ss_pred CCccCCcEEEecC---CCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCC-----CCCCccceeeeCcEEe
Q 003468 167 KELVPGDIVELKV---GDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENS-----DIQGKKCMVFAGTTVV 238 (817)
Q Consensus 167 ~dLv~GDII~l~~---G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~-----~~~~~~~~l~~Gt~v~ 238 (817)
+||.|||+|.+.. ...||||.+|| .|.|.|||++|||||.|.-|.+....+.. .-.++.+++|.||.++
T Consensus 269 eeLlPgDvVSI~r~~ed~~vPCDllLL---~GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkiv 345 (1160)
T KOG0209|consen 269 EELLPGDVVSIGRGAEDSHVPCDLLLL---RGSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIV 345 (1160)
T ss_pred cccCCCceEEeccCcccCcCCceEEEE---ecceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEE
Confidence 9999999999976 66899999999 58999999999999999999876433211 1235788999999998
Q ss_pred e-------------CeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003468 239 N-------------GTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFL 305 (817)
Q Consensus 239 ~-------------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~ 305 (817)
+ |-+.+.|++||.+|..|++.+.+... .++-|.-.+ +.+ .++.+.++++++... +.
T Consensus 346 Qht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~--aervTaNn~--Etf--~FILFLlVFAiaAa~--Yv--- 414 (1160)
T KOG0209|consen 346 QHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFS--AERVTANNR--ETF--IFILFLLVFAIAAAG--YV--- 414 (1160)
T ss_pred EecCCccccccCCCCCeEEEEEeccccccCCceeeeEEec--ceeeeeccH--HHH--HHHHHHHHHHHHhhh--eE---
Confidence 4 56999999999999999999988875 233332211 122 122222222222111 11
Q ss_pred cccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCC
Q 003468 306 TWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKT 385 (817)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKT 385 (817)
|. .|........ ...|.-++.++...+|+-||+-++++...+...|+|.++.|..+-.+.-.|+||+.|||||
T Consensus 415 -wv--~Gskd~~Rsr----YKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKT 487 (1160)
T KOG0209|consen 415 -WV--EGSKDPTRSR----YKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKT 487 (1160)
T ss_pred -EE--ecccCcchhh----hheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCC
Confidence 11 1110000000 1223345567788899999999999999999999999999999999999999999999999
Q ss_pred cccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCCh
Q 003468 386 GTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMP 465 (817)
Q Consensus 386 GTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 465 (817)
||||+..|.|.++-......+.. +. .+. .....+. .++.||+... .+++ ..|||
T Consensus 488 GTLT~d~lvv~Gvag~~~~~~~~---------~~-----~s~----~p~~t~~----vlAscHsLv~-le~~---lVGDP 541 (1160)
T KOG0209|consen 488 GTLTEDDLVVEGVAGLSADEGAL---------TP-----ASK----APNETVL----VLASCHSLVL-LEDK---LVGDP 541 (1160)
T ss_pred CccccccEEEEecccccCCcccc---------cc-----hhh----CCchHHH----HHHHHHHHHH-hcCc---ccCCh
Confidence 99999999999986532211100 00 000 1122233 3345554211 1111 57999
Q ss_pred hHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecC----CcEEEEEeCcchH
Q 003468 466 TEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSS----GNKKLLVKGAVEN 541 (817)
Q Consensus 466 ~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~----~~~~~~~KGa~e~ 541 (817)
.|.|.+.. .|+.....+... +.+ ..-...++.+++.|.|..|||||+++... -++++.+|||||.
T Consensus 542 lEKA~l~~---v~W~~~k~~~v~--p~~------~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEv 610 (1160)
T KOG0209|consen 542 LEKATLEA---VGWNLEKKNSVC--PRE------GNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEV 610 (1160)
T ss_pred HHHHHHHh---cCcccccCcccC--CCc------CCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHH
Confidence 99998865 344432221110 000 00113456789999999999999987532 3578899999999
Q ss_pred HHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCe
Q 003468 542 LLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRL 621 (817)
Q Consensus 542 il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 621 (817)
|.++.... ...+.+...+|+++|.||+|++||++..-. .....+.+++.+|+||
T Consensus 611 i~~ml~dv--------------P~dY~~iYk~ytR~GsRVLALg~K~l~~~~------------~~q~rd~~Re~vEsdL 664 (1160)
T KOG0209|consen 611 IQEMLRDV--------------PKDYDEIYKRYTRQGSRVLALGYKPLGDMM------------VSQVRDLKREDVESDL 664 (1160)
T ss_pred HHHHHHhC--------------chhHHHHHHHHhhccceEEEEecccccccc------------hhhhhhhhhhhhhhcc
Confidence 99876532 245778899999999999999999885311 0112345678899999
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCC------------ccc-----------
Q 003468 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAH------------EDI----------- 678 (817)
Q Consensus 622 ~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~------------~~~----------- 678 (817)
+|.|++.|..|+++|++++|+.|++.+++++|+|||++.||.++|+++|+.... .++
T Consensus 665 tFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~l 744 (1160)
T KOG0209|consen 665 TFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVL 744 (1160)
T ss_pred eeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceee
Confidence 999999999999999999999999999999999999999999999999995420 000
Q ss_pred --------------cccccChhHHHHHHHHh--HhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhh
Q 003468 679 --------------SSQSITGKEFMDIHNQK--NYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 742 (817)
Q Consensus 679 --------------~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~ 742 (817)
+...++|+.++.+.... ..+ .....||||+.|.||..++..+++.|..++|+|||.||+.|||
T Consensus 745 p~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l-~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK 823 (1160)
T KOG0209|consen 745 PLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRL-IPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALK 823 (1160)
T ss_pred cCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHh-hhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhh
Confidence 22356677777763322 222 1257799999999999999999999999999999999999999
Q ss_pred hCCceEEeCCC
Q 003468 743 LADIGVAMGIA 753 (817)
Q Consensus 743 ~A~vgiamg~~ 753 (817)
+||||||+=++
T Consensus 824 ~AhVGVALL~~ 834 (1160)
T KOG0209|consen 824 QAHVGVALLNN 834 (1160)
T ss_pred hcccceehhcC
Confidence 99999998533
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=6.2e-71 Score=657.77 Aligned_cols=507 Identities=24% Similarity=0.339 Sum_probs=423.4
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEe
Q 003468 113 FVE-PLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLR 191 (817)
Q Consensus 113 ~~~-~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~ 191 (817)
|++ +..+++++.++.+++.+.+.|+++.+++|.++.|+.++|+|+|++ ++|+.++|+|||+|.|++||+|||||+|++
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~-~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~ 363 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGE-KSVPLADVQPGMLLRLTTGDRVPVDGEITQ 363 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcE-EEEEHHHcCCCCEEEEcCCCEeeeeEEEEE
Confidence 444 677777888899999999999999999999999999999999998 899999999999999999999999999996
Q ss_pred ecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCC
Q 003468 192 LTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEED 271 (817)
Q Consensus 192 ~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 271 (817)
|.+.||||+|||||.|+.|.++ +.+|+||.+.+|.+.++|+++|.+|.+|+|.++++++ +..+
T Consensus 364 ---g~~~vdeS~lTGEs~pv~k~~g------------d~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a--~~~k 426 (834)
T PRK10671 364 ---GEAWLDEAMLTGEPIPQQKGEG------------DSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA--QSSK 426 (834)
T ss_pred ---ceEEEeehhhcCCCCCEecCCC------------CEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHH--hccC
Confidence 6789999999999999999987 5699999999999999999999999999999999988 6678
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHH
Q 003468 272 TPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCL 351 (817)
Q Consensus 272 ~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~ 351 (817)
+++++.+++++.++++++++++++.+++|+.. +.+ ..+...+.+++++++++|||+|++++|+++
T Consensus 427 ~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~-------~~~--------~~~~~~~~~a~~vlv~acPcaL~la~p~a~ 491 (834)
T PRK10671 427 PEIGQLADKISAVFVPVVVVIALVSAAIWYFF-------GPA--------PQIVYTLVIATTVLIIACPCALGLATPMSI 491 (834)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCc--------hHHHHHHHHHHHHHHHhcccchhhhHHHHH
Confidence 99999999999999999888888877766432 111 012345778999999999999999999999
Q ss_pred HhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEEEEEEEeCCcCCccceeeecCCccCCCCCcccCCCCC
Q 003468 352 ALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVG 431 (817)
Q Consensus 352 ~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (817)
..++.+++++|+++|+++++|+|+++|++|||||||||+|+|+|.+++..+. .
T Consensus 492 ~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------~------------- 544 (834)
T PRK10671 492 ISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG--------------V------------- 544 (834)
T ss_pred HHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC--------------C-------------
Confidence 9999999999999999999999999999999999999999999998764320 0
Q ss_pred CCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEee
Q 003468 432 RMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATL 511 (817)
Q Consensus 432 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 511 (817)
.... .+..+.+++.. +.||.+.|++++++....... -
T Consensus 545 -~~~~--~l~~a~~~e~~------------s~hp~a~Ai~~~~~~~~~~~~----------------------------~ 581 (834)
T PRK10671 545 -DEAQ--ALRLAAALEQG------------SSHPLARAILDKAGDMTLPQV----------------------------N 581 (834)
T ss_pred -CHHH--HHHHHHHHhCC------------CCCHHHHHHHHHHhhCCCCCc----------------------------c
Confidence 0111 12222233322 368999999988753221100 0
Q ss_pred ccCCC-CceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeeccc
Q 003468 512 EFDRD-RKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDL 590 (817)
Q Consensus 512 ~F~s~-~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~ 590 (817)
+|... .+.+...+ +| ..+.+|+++.+.+.. +. ++.+.+.++.+..+|.+++.+++.
T Consensus 582 ~~~~~~g~Gv~~~~---~g--~~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~~~v~va~~--- 638 (834)
T PRK10671 582 GFRTLRGLGVSGEA---EG--HALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGATPVLLAVD--- 638 (834)
T ss_pred cceEecceEEEEEE---CC--EEEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCCeEEEEEEC---
Confidence 11110 12222222 22 245679998764421 11 123455667788899999888852
Q ss_pred ccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC
Q 003468 591 REFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
..++|++.+.|++||+++++|++|++.|++++|+|||+..++..+++++|
T Consensus 639 ------------------------------~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 639 ------------------------------GKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred ------------------------------CEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 35899999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 671 VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 671 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
+.. ++++..|++|.++++.++..++.|+|+|||.||++|++.||+||||
T Consensus 689 i~~-------------------------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 689 IDE-------------------------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred CCE-------------------------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 942 6788899999999999999999999999999999999999999999
Q ss_pred CCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHhhhhHHHHHHHH
Q 003468 751 GIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGFCHLENHCLSLE 807 (817)
Q Consensus 751 g~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 807 (817)
| ++++.++++||+++.++++++|..++++||+++++|++++.|.+.+|+..+...+
T Consensus 738 g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 738 G-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred c-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 7999999999999999999999999999999999999999999999988766554
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-61 Score=493.02 Aligned_cols=533 Identities=25% Similarity=0.363 Sum_probs=410.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCCCc--chhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhccc-ceEEec
Q 003468 80 NDTLVRILLVAAVVSFVLAWYDGEEGGE--MEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE-QATVTR 156 (817)
Q Consensus 80 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V~r 156 (817)
++|..++.++.+++..++.+++...++. +..++....+++++.+++.-+-+.+.|-|.+.+-+.|++...+ .+++++
T Consensus 31 kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~ 110 (681)
T COG2216 31 KNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLR 110 (681)
T ss_pred hCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhc
Confidence 5666677777777777665555443332 2222233344555566666777788888877777778765544 567777
Q ss_pred C-CccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCc
Q 003468 157 D-GKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGT 235 (817)
Q Consensus 157 ~-g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt 235 (817)
+ |.+ +.+++.+|..||+|.|++||.||+||.+++ |...||||.+||||.||.|.++-. ..-+-.||
T Consensus 111 ~~g~~-~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asVdESAITGESaPViresGgD---------~ssVtGgT 177 (681)
T COG2216 111 ADGSI-EMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASVDESAITGESAPVIRESGGD---------FSSVTGGT 177 (681)
T ss_pred CCCCe-eeccccccccCCEEEEecCCCccCCCeEEe---eeeecchhhccCCCcceeeccCCC---------cccccCCc
Confidence 7 666 999999999999999999999999999996 778999999999999999998732 23488999
Q ss_pred EEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCc
Q 003468 236 TVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPR 315 (817)
Q Consensus 236 ~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 315 (817)
.+++.|.+.++++...+|++.|+..+++.+ +.++||-+-.+.-+..-++++.++.....+.+. .|. ++-
T Consensus 178 ~v~SD~l~irita~pG~sFlDrMI~LVEgA--~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a--~y~-----~g~-- 246 (681)
T COG2216 178 RVLSDWLKIRITANPGETFLDRMIALVEGA--ERQKTPNEIALTILLSGLTLIFLLAVATLYPFA--IYS-----GGG-- 246 (681)
T ss_pred EEeeeeEEEEEEcCCCccHHHHHHHHhhch--hccCChhHHHHHHHHHHHHHHHHHHHHhhhhHH--HHc-----CCC--
Confidence 999999999999999999999999999998 788899776665544444332222221111111 111 111
Q ss_pred ccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHhhccccccccccccccCCeeEEecCCCcccccCccEE
Q 003468 316 NFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAV 395 (817)
Q Consensus 316 ~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~I~~DKTGTLT~~~m~v 395 (817)
...+...++++++.+|-.++..++..-..++.|+.+.|++-++..++|..|.||++..|||||+|-|+-..
T Consensus 247 ---------~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A 317 (681)
T COG2216 247 ---------AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQA 317 (681)
T ss_pred ---------CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhh
Confidence 11244567899999999999888887788999999999999999999999999999999999999988776
Q ss_pred EEEEEeCCcCCccceeeecCCccCCCCCcccCCCCCCCCHHHHHHHHHHhHhcCCeeeecCCeeEeCCChhHHHHHHHHH
Q 003468 396 TKLVAVGSRAGTLRSFNVQGTTYNPSDGRIEGWPVGRMDANLQTIAKISAVCNDAGVEQSGNHYVASGMPTEAALKVMVE 475 (817)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~e~al~~~~~ 475 (817)
.++.+.+. .. .+.++..+.+++-. ...|.-..++.+++
T Consensus 318 ~~f~p~~g----------------------------v~---~~~la~aa~lsSl~-----------DeTpEGrSIV~LA~ 355 (681)
T COG2216 318 SEFIPVPG----------------------------VS---EEELADAAQLASLA-----------DETPEGRSIVELAK 355 (681)
T ss_pred hheecCCC----------------------------CC---HHHHHHHHHHhhhc-----------cCCCCcccHHHHHH
Confidence 66654321 11 12334433333211 13477788999999
Q ss_pred HcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEEEEeecCCcEEEEEeCcchHHHhccccccccCCc
Q 003468 476 KMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGVLVNSSSGNKKLLVKGAVENLLERSSFVQLLDGS 555 (817)
Q Consensus 476 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~~~~~~~~~g~ 555 (817)
+.++...... ....-..+||+.+.|++++-.. ++ ..+.|||.+.+.+.-+. .+|+
T Consensus 356 ~~~~~~~~~~------------------~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~---~~g~ 410 (681)
T COG2216 356 KLGIELREDD------------------LQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRE---RGGH 410 (681)
T ss_pred HhccCCCccc------------------ccccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHh---cCCC
Confidence 9886432110 0001246899988877666543 22 67889999999886541 1221
Q ss_pred eeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcH
Q 003468 556 VVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPRE 635 (817)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~ 635 (817)
+ ...+...+++-++.|=..++++. |-.++|++.++|-++|
T Consensus 411 ---~----p~~l~~~~~~vs~~GGTPL~V~~---------------------------------~~~~~GVI~LkDivK~ 450 (681)
T COG2216 411 ---I----PEDLDAAVDEVSRLGGTPLVVVE---------------------------------NGRILGVIYLKDIVKP 450 (681)
T ss_pred ---C----CHHHHHHHHHHHhcCCCceEEEE---------------------------------CCEEEEEEEehhhcch
Confidence 1 13566777888899988888873 3469999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHH
Q 003468 636 EVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQ 715 (817)
Q Consensus 636 ~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 715 (817)
+.++-+.+||+.||+.+|+||||+.||..||++.|++. ..+.++||+|.
T Consensus 451 Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-------------------------------fiAeatPEdK~ 499 (681)
T COG2216 451 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FIAEATPEDKL 499 (681)
T ss_pred hHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-------------------------------hhhcCChHHHH
Confidence 99999999999999999999999999999999999963 34689999999
Q ss_pred HHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHH
Q 003468 716 EIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSI 784 (817)
Q Consensus 716 ~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~ 784 (817)
++++.-|..|+.|+|+|||.||+|+|.+||||+||. +|+..|||++++|=+|.|...+.+.++.|+.+
T Consensus 500 ~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 500 ALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred HHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 999999999999999999999999999999999998 89999999999999999999999999999874
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=7e-36 Score=304.90 Aligned_cols=228 Identities=35% Similarity=0.567 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhhcccc-eEEecCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeE
Q 003468 119 IFLILIVNAIVGIWQESNAEKALEALKEIQSEQ-ATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTV 197 (817)
Q Consensus 119 il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~ 197 (817)
|+++++++.+++.++++|+++.++++++..+++ ++|.|+|++ +.++++||+|||||.|++||++||||+|++ +|.+
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~-~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~ 78 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRW-QKIPSSELVPGDIIILKAGDIVPADGILLE--SGSA 78 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEE-EEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEecccc-ccchHhhccceeeeecccccccccCcccee--cccc
Confidence 566777888899999999999999999888886 999999998 999999999999999999999999999996 6999
Q ss_pred EEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHH
Q 003468 198 RVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKK 277 (817)
Q Consensus 198 ~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~ 277 (817)
+||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|++.++|++||.+|..|++.+.+..+ ..+++++++.
T Consensus 79 ~vd~s~ltGes~pv~k~~~-------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~--~~~~~~~~~~ 149 (230)
T PF00122_consen 79 YVDESALTGESEPVKKTPL-------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS--ESKKSPLERK 149 (230)
T ss_dssp EEECHHHHSBSSEEEESSS-------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS--CSS-THHHHH
T ss_pred ccccccccccccccccccc-------cccccchhhccccccccccccccceeeecccccccccccccc--cccchhhhhh
Confidence 9999999999999999953 234458999999999999999999999999999999988776 5567999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHHH
Q 003468 278 LNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRK 357 (817)
Q Consensus 278 l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~ 357 (817)
++++..++.+++++++++++++++... . ...+...+..++++++++||++||+++++++..+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~ 214 (230)
T PF00122_consen 150 LNKIAKILIIIILAIAILVFIIWFFND----S-----------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARR 214 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHTGS----T-----------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcccccchhhhccceecc----c-----------ccccccccccccceeeeecccceeehHHHHHHHHHHH
Confidence 999999998888888877775544310 0 1112456778899999999999999999999999999
Q ss_pred Hhhccccccccccccc
Q 003468 358 MAQKNALVRKLPSVET 373 (817)
Q Consensus 358 l~k~~ilvk~~~~le~ 373 (817)
|+++|+++|+++++|+
T Consensus 215 ~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 215 LAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHTTEEESSTTHHHH
T ss_pred HHHCCEEEeCcccccC
Confidence 9999999999999984
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.85 E-value=2.9e-21 Score=195.35 Aligned_cols=97 Identities=47% Similarity=0.844 Sum_probs=92.1
Q ss_pred CeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhc
Q 003468 620 RLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLR 699 (817)
Q Consensus 620 ~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (817)
++.++|.+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 56799999999999999999999999999999999999999999999999994
Q ss_pred cCCceEEEec--CcccH--HHHHHHHhcCCCEEEEEcCCccCHHHhhhCC
Q 003468 700 QDGGLLFSRA--EPRHK--QEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 745 (817)
Q Consensus 700 ~~~~~v~~r~--~p~~K--~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~ 745 (817)
+..+|++. +|++| .++++.++..++.|+|+|||.||++|+++||
T Consensus 168 --~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 --DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 45689999 99999 9999999988789999999999999999997
No 36
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.79 E-value=2.5e-17 Score=175.07 Aligned_cols=274 Identities=16% Similarity=0.226 Sum_probs=184.9
Q ss_pred eCcchHHHhccccccccCCceeecCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccc-cCCCC--------------
Q 003468 536 KGAVENLLERSSFVQLLDGSVVELDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFET-YDGDE-------------- 600 (817)
Q Consensus 536 KGa~e~il~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~-~~~~~-------------- 600 (817)
-|-.+.+.+.|+.+++ +.++.|++..+|.++.+.+.+..-.|+ +++||||+....... ..++.
T Consensus 697 ~g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T 774 (1354)
T KOG4383|consen 697 FGFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIET 774 (1354)
T ss_pred ccHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhh
Confidence 4666788899999886 557889999999999999888888886 889999975432110 00000
Q ss_pred ------Ccchhhc---cC-----------CCCccccccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHh
Q 003468 601 ------DHPAHQL---LL-----------NPTNYSSIESRLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKN 660 (817)
Q Consensus 601 ------~~~~~~~---~~-----------~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~ 660 (817)
..+..++ .. ..+.....-++.+|.|++.+..+.+++..+.|+.|.++.||++..|-.+..
T Consensus 775 ~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdEL 854 (1354)
T KOG4383|consen 775 ACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDEL 854 (1354)
T ss_pred hccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHH
Confidence 0000000 00 011122334567899999999999999999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCc---------cccc-------ccc------ChhHHHHH------------HHH------------
Q 003468 661 TAEAICREIGVFGAHE---------DISS-------QSI------TGKEFMDI------------HNQ------------ 694 (817)
Q Consensus 661 ~a~~ia~~~gi~~~~~---------~~~~-------~~~------~~~~~~~~------------~~~------------ 694 (817)
..+-+|+++|+..... +... ... -.+++.++ ++.
T Consensus 855 kSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds 934 (1354)
T KOG4383|consen 855 KSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS 934 (1354)
T ss_pred HHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc
Confidence 9999999999953211 0000 000 00111111 000
Q ss_pred -----------------hHhhccC---------CceEEEecCcccHHHHHHHHhcCCCEEEEEcCCcc--CHHHhhhCCc
Q 003468 695 -----------------KNYLRQD---------GGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVN--DAPALKLADI 746 (817)
Q Consensus 695 -----------------~~~~~~~---------~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~N--D~~~l~~A~v 746 (817)
...+... -.-+|..++|+...++++.+|++|++|+++|...| ....+-+||+
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccce
Confidence 0000000 12268999999999999999999999999999988 4456689999
Q ss_pred eEEeCCCc------------cHH------------------HHhhcCEEeccCCccHHHHHHHHhHHHHHhHHHHHHHHh
Q 003468 747 GVAMGIAG------------TEV------------------AKEASDMVLADDNFGTIVAAVGEGRSIYNNMKAFIRYGF 796 (817)
Q Consensus 747 giamg~~~------------~~~------------------ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 796 (817)
+||+..-. +.. ..-++|+.+.....-.+..+|+.+|..+..+|+++.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99985110 000 111334444444455777889999999999999999999
Q ss_pred hhhHHHHHHHHhhhc
Q 003468 797 CHLENHCLSLELNLD 811 (817)
Q Consensus 797 ~~n~~~~~~~~~~~~ 811 (817)
++.+......++.+|
T Consensus 1095 q~qL~l~Vi~flSc~ 1109 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCF 1109 (1354)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988877766666554
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.56 E-value=3.2e-14 Score=121.32 Aligned_cols=125 Identities=26% Similarity=0.362 Sum_probs=107.6
Q ss_pred eEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhcc
Q 003468 621 LVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQ 700 (817)
Q Consensus 621 l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (817)
+...+.++---++-++++++|++|++. ++++++|||..-+....|+..|+..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--------------------------- 70 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--------------------------- 70 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce---------------------------
Confidence 346788888888999999999999999 9999999999999999999999853
Q ss_pred CCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe-CC-CccHHHHhhcCEEeccCCccHHHHH
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM-GI-AGTEVAKEASDMVLADDNFGTIVAA 777 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam-g~-~~~~~ak~~ad~vl~~~~~~~i~~~ 777 (817)
..+|+-..|+.|..+++.|+.+++.|+|+|||.||.+||+.||+||.. ++ +..+-+.++||+++.+ ...++++
T Consensus 71 --~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 71 --ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred --eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 457888999999999999999999999999999999999999999874 42 2344567999999875 4444444
No 38
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.51 E-value=4e-14 Score=113.39 Aligned_cols=69 Identities=35% Similarity=0.567 Sum_probs=66.1
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHH
Q 003468 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVS 94 (817)
Q Consensus 26 ~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 94 (817)
||..+++++++.|+|+...||+.+||++|+++||+|+++.++++++|+.++++|.+|++++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 799999999999999999999999999999999999999999999999999999999999999999875
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.49 E-value=6.1e-14 Score=118.66 Aligned_cols=88 Identities=35% Similarity=0.482 Sum_probs=69.2
Q ss_pred hHhcCCeeeecCCe--eEeCCChhHHHHHHHHHHcCCCCCCCCCCCCCchhhhhhhhhccccccceEeeccCCCCceEEE
Q 003468 445 AVCNDAGVEQSGNH--YVASGMPTEAALKVMVEKMGFPEGVNHGSSSSPEDVLRCCQLWNTLEQRFATLEFDRDRKSMGV 522 (817)
Q Consensus 445 ~l~~~~~~~~~~~~--~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msv 522 (817)
++||++.+....+. ....|+|+|.||+.++.+.|.... ....+..+.+++.+||+|+||||+|
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~---------------~~~~~~~~~~~~~~pF~S~rK~msv 65 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID---------------IKEIRSKYKIVAEIPFDSERKRMSV 65 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc---------------HHHHHhhcceeEEEccCcccceeEE
Confidence 47998887654322 237899999999999999875322 1234567789999999999999999
Q ss_pred EEeecCCcEEEEEeCcchHHHhcccc
Q 003468 523 LVNSSSGNKKLLVKGAVENLLERSSF 548 (817)
Q Consensus 523 vv~~~~~~~~~~~KGa~e~il~~~~~ 548 (817)
+++ .++...+|+|||||.|+++|++
T Consensus 66 v~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 66 VVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 998 3335677999999999999985
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.38 E-value=6.5e-12 Score=131.03 Aligned_cols=155 Identities=25% Similarity=0.320 Sum_probs=106.3
Q ss_pred EEeccCCC-CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC------------CccccccccChhHHHHH
Q 003468 625 GMVGLRDP-PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA------------HEDISSQSITGKEFMDI 691 (817)
Q Consensus 625 G~~~~~d~-~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~------------~~~~~~~~~~~~~~~~~ 691 (817)
|.+.-.+. +.+.++++|+++++.|++++++|||+...+..+.+++++... ++.+....++.+....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444454 899999999999999999999999999999999999998531 11111111122111111
Q ss_pred H-------------------------------------------------------------------HHhHhhccCCce
Q 003468 692 H-------------------------------------------------------------------NQKNYLRQDGGL 704 (817)
Q Consensus 692 ~-------------------------------------------------------------------~~~~~~~~~~~~ 704 (817)
. ............
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 000000000111
Q ss_pred EEEe-------cCc--ccHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCc
Q 003468 705 LFSR-------AEP--RHKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNF 771 (817)
Q Consensus 705 v~~r-------~~p--~~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~ 771 (817)
.+.+ ..| .+|..-++.+.+ ..+.|++|||+.||++||+.|+.||||| ++.+.+|+.||+++.+++.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccc
Confidence 1111 222 356555555443 3457999999999999999999999999 5699999999999999999
Q ss_pred cHHHHHHHH
Q 003468 772 GTIVAAVGE 780 (817)
Q Consensus 772 ~~i~~~i~~ 780 (817)
+||.+++++
T Consensus 251 ~Gv~~~l~~ 259 (264)
T COG0561 251 DGVAEALEK 259 (264)
T ss_pred hHHHHHHHH
Confidence 999999864
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.34 E-value=1.5e-11 Score=128.87 Aligned_cols=57 Identities=28% Similarity=0.352 Sum_probs=52.0
Q ss_pred cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 723 EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 723 ~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
...+.|++||||.||++||+.|++||||| |+.+.+|++||+|+.+++.+|+.++|++
T Consensus 210 i~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 210 IKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 33478999999999999999999999999 7888899999999999999999999853
No 42
>PRK10976 putative hydrolase; Provisional
Probab=99.34 E-value=1.3e-11 Score=129.03 Aligned_cols=55 Identities=24% Similarity=0.284 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcC--EEeccCCccHHHHHHH
Q 003468 724 DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASD--MVLADDNFGTIVAAVG 779 (817)
Q Consensus 724 ~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad--~vl~~~~~~~i~~~i~ 779 (817)
..+.|++||||.||++||+.|++||||| |+.+.+|++|| +|+.+++.+|+.++|+
T Consensus 205 ~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 205 SLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred CHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 3478999999999999999999999999 78888899988 7888999999999885
No 43
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.33 E-value=9.3e-12 Score=130.43 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=55.0
Q ss_pred cHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCE--EeccCCccHHHHHHH
Q 003468 713 HKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDM--VLADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~--vl~~~~~~~i~~~i~ 779 (817)
.|..-++.+ +...+.|++||||.||++||+.|++||||| |+.+.+|++||+ ++.+++.+|+.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 455444444 334578999999999999999999999999 788889999996 777889999999985
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.30 E-value=3.7e-11 Score=122.71 Aligned_cols=152 Identities=26% Similarity=0.283 Sum_probs=102.0
Q ss_pred EEeccCCC-CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-----Cc---------cccccccChhHHH
Q 003468 625 GMVGLRDP-PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-----HE---------DISSQSITGKEFM 689 (817)
Q Consensus 625 G~~~~~d~-~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~~---------~~~~~~~~~~~~~ 689 (817)
|.+.-.|. +.+.+.++|+++++.|++++++|||+...+..+++.+|+... +. .+....+ +...
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~--~~~~ 89 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDI--EECE 89 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcch--HHHH
Confidence 33333444 789999999999999999999999999999999999998521 00 0000000 0010
Q ss_pred HH----HHH-------------------------------hHhhccCC--ce-----EEEecCcc--cHHHHHHHH----
Q 003468 690 DI----HNQ-------------------------------KNYLRQDG--GL-----LFSRAEPR--HKQEIVRLL---- 721 (817)
Q Consensus 690 ~~----~~~-------------------------------~~~~~~~~--~~-----v~~r~~p~--~K~~iv~~l---- 721 (817)
.+ .+. ...+.... .. .+....|. .|..-++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~ 169 (230)
T PRK01158 90 KAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELM 169 (230)
T ss_pred HHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHh
Confidence 10 000 00000000 00 01122222 355544444
Q ss_pred hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 722 KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 722 ~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+...+.+++|||+.||++|++.|++||||| ++.+.+|++||+|+.+++.+|+.++++
T Consensus 170 ~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 170 GIDPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCCHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 444578999999999999999999999999 788888999999999999999999885
No 45
>PLN02887 hydrolase family protein
Probab=99.28 E-value=2.7e-11 Score=136.48 Aligned_cols=54 Identities=30% Similarity=0.476 Sum_probs=50.8
Q ss_pred CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 725 GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 725 ~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
.+.|++||||.||++||+.|++||||| |+.+.+|++||+|+.+++.+||..+|+
T Consensus 523 ~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 523 PDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 368999999999999999999999999 788888999999999999999999986
No 46
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.26 E-value=1.4e-11 Score=97.20 Aligned_cols=62 Identities=39% Similarity=0.489 Sum_probs=57.6
Q ss_pred HhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Q 003468 37 KYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLA 98 (817)
Q Consensus 37 ~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 98 (817)
.|++++..||+.+|+++|+++||+|+++.++.+++|+.++++|.+|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888888999999999999999999999888999999999999999999999999998763
No 47
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.25 E-value=4.2e-11 Score=120.71 Aligned_cols=146 Identities=26% Similarity=0.305 Sum_probs=98.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-----C-------ccccccccChhHHHHH-------H
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-----H-------EDISSQSITGKEFMDI-------H 692 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~-------~~~~~~~~~~~~~~~~-------~ 692 (817)
.+.+++.++|++|++.|++++++||++...+..+++.+++... + ..+.........+... .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998521 0 0000000000000000 0
Q ss_pred ----------------------HHhHhhccCCc-------eEEEecCcccHHHHHHHHhc----CCCEEEEEcCCccCHH
Q 003468 693 ----------------------NQKNYLRQDGG-------LLFSRAEPRHKQEIVRLLKE----DGEVVAMTGDGVNDAP 739 (817)
Q Consensus 693 ----------------------~~~~~~~~~~~-------~v~~r~~p~~K~~iv~~l~~----~~~~v~~~GDg~ND~~ 739 (817)
.....+..... .+........|...++.+.+ ..+.+++|||+.||++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00000000000 01111223467666665533 3457999999999999
Q ss_pred HhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 740 ALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 740 ~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
|++.|++|+||+ ++.+.+|+.||+++.+++.+++.+++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999 78999999999999988888887753
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.20 E-value=2e-10 Score=116.93 Aligned_cols=147 Identities=23% Similarity=0.244 Sum_probs=97.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-----Cc---------cccccccChhHHHHH-H----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-----HE---------DISSQSITGKEFMDI-H---- 692 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----~~---------~~~~~~~~~~~~~~~-~---- 692 (817)
.+.+.+.++|+++++.|++++++|||+...+..+++.+|+... +. .+....+........ .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4789999999999999999999999999999999999996321 00 000000111000000 0
Q ss_pred ------------------------HHhH-hhccCCc-------eEEEecCc--ccHHHHHHHH----hcCCCEEEEEcCC
Q 003468 693 ------------------------NQKN-YLRQDGG-------LLFSRAEP--RHKQEIVRLL----KEDGEVVAMTGDG 734 (817)
Q Consensus 693 ------------------------~~~~-~~~~~~~-------~v~~r~~p--~~K~~iv~~l----~~~~~~v~~~GDg 734 (817)
+... ....... ..+....| ..|..-++.+ +...+.+++|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0000 0000000 00112222 3565555554 3345789999999
Q ss_pred ccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH----HHHHHH
Q 003468 735 VNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT----IVAAVG 779 (817)
Q Consensus 735 ~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~----i~~~i~ 779 (817)
.||++|++.|++|+||+ |+.+.+|+.||+|+.+++.++ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 688888999999999999999 666653
No 49
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.20 E-value=2.1e-10 Score=120.38 Aligned_cols=55 Identities=31% Similarity=0.458 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 724 DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 724 ~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
..+.+++|||+.||++|++.|++||||| ++.+.+|+.||+++.+++.+|+..+|+
T Consensus 214 ~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 214 SMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 3468999999999999999999999999 567878999999999999999999985
No 50
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.19 E-value=1.7e-10 Score=119.58 Aligned_cols=147 Identities=21% Similarity=0.299 Sum_probs=100.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCC-------------CccccccccChhHHH--------
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGA-------------HEDISSQSITGKEFM-------- 689 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-------------~~~~~~~~~~~~~~~-------- 689 (817)
..+.+++.+++++++++|++++++|||....+..+.+++++... .+.+....++.+.+.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 34789999999999999999999999999999999999997520 001111111111111
Q ss_pred -------------------------------------------------------------HHHHHhH-hh-------cc
Q 003468 690 -------------------------------------------------------------DIHNQKN-YL-------RQ 700 (817)
Q Consensus 690 -------------------------------------------------------------~~~~~~~-~~-------~~ 700 (817)
.+..... .+ ..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 1100000 00 00
Q ss_pred CCceEEEecCcccHHHHHHHHh----cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHH
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~----~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
....+..-.....|..-++.+. ...+.++++||+.||.+||+.|+.||||+ ++++..|..||+++.+.+.+++++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 0111112223356766555554 34578999999999999999999999999 788888999999999988899988
Q ss_pred HH
Q 003468 777 AV 778 (817)
Q Consensus 777 ~i 778 (817)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 75
No 51
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.10 E-value=1.2e-09 Score=114.24 Aligned_cols=147 Identities=16% Similarity=0.165 Sum_probs=96.5
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC------CCcccc--------------ccccChhHHHHHH
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG------AHEDIS--------------SQSITGKEFMDIH 692 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~------~~~~~~--------------~~~~~~~~~~~~~ 692 (817)
+.+.++++|++|+++|++++++|||....+..+++++|+.. ++..++ ...++.+.+..+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 56889999999999999999999999999999999999841 111110 1112222222220
Q ss_pred HHh--------------------------------H-----------------------hhccCCceE-----EEecCc-
Q 003468 693 NQK--------------------------------N-----------------------YLRQDGGLL-----FSRAEP- 711 (817)
Q Consensus 693 ~~~--------------------------------~-----------------------~~~~~~~~v-----~~r~~p- 711 (817)
+.. . .+......+ +....|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 000 0 000000000 111222
Q ss_pred -ccHHH----HHHHHhc---CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH-----HHhhcCEEeccCCccHHHHHH
Q 003468 712 -RHKQE----IVRLLKE---DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV-----AKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 -~~K~~----iv~~l~~---~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~-----ak~~ad~vl~~~~~~~i~~~i 778 (817)
..|.. +++.++. ..+.|++||||.||++||+.|++|||||++..+. .+..||+++...+-+|+.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 34543 4444555 5678999999999999999999999999655332 355899999999999999988
Q ss_pred H
Q 003468 779 G 779 (817)
Q Consensus 779 ~ 779 (817)
+
T Consensus 265 ~ 265 (271)
T PRK03669 265 D 265 (271)
T ss_pred H
Confidence 5
No 52
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.09 E-value=1.6e-09 Score=112.21 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=95.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC-----CC--------cc------ccccccChhHHHHHHH
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG-----AH--------ED------ISSQSITGKEFMDIHN 693 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~-----~~--------~~------~~~~~~~~~~~~~~~~ 693 (817)
..+.+.++|++|+++|++++++|||....+..+.+++|+.. ++ .. +....++.+.+..+.+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 45578999999999999999999999999999999999742 00 00 1111122222111100
Q ss_pred H-----------------------------------------------------hHhhccCCceE-----EEecCc--cc
Q 003468 694 Q-----------------------------------------------------KNYLRQDGGLL-----FSRAEP--RH 713 (817)
Q Consensus 694 ~-----------------------------------------------------~~~~~~~~~~v-----~~r~~p--~~ 713 (817)
. ...+......+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0 00000000000 111112 34
Q ss_pred HHHHH----HHHhcC--CCEEEEEcCCccCHHHhhhCCceEEeCCCcc--HHHHhh--c-CEEeccCCccHHHHHHHH
Q 003468 714 KQEIV----RLLKED--GEVVAMTGDGVNDAPALKLADIGVAMGIAGT--EVAKEA--S-DMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 714 K~~iv----~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~--~~ak~~--a-d~vl~~~~~~~i~~~i~~ 780 (817)
|..-+ +.++.. .+.++++||+.||.+||+.|++||||+|+.. +..|+. | ++|+.+++.+|+.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 54433 444444 6789999999999999999999999995432 456886 4 599999999999999863
No 53
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.09 E-value=5.3e-10 Score=117.95 Aligned_cols=127 Identities=18% Similarity=0.282 Sum_probs=96.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+...... . +...+..+-.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an----~---------------lei~dg~ltg~v~g 241 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN----E---------------LEIMDGKLTGNVLG 241 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe----E---------------EEEECCEEEeEecC
Confidence 5799999999999999999999999998888899999998531100 0 00001111111
Q ss_pred --cCcccHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 709 --AEPRHKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 709 --~~p~~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+....|...++.+.+ ..+.|+++|||.||++|++.||+|||| ++.+..++.||+++..+++++++.++-
T Consensus 242 ~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 242 DIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 123567766666543 357899999999999999999999999 467778999999999999998887763
No 54
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.07 E-value=5.1e-10 Score=106.32 Aligned_cols=108 Identities=19% Similarity=0.222 Sum_probs=87.6
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHH
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIV 718 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv 718 (817)
..|+.|+++|+++.++|+.+...+....+.+|+..... .....|+....++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~-----------------------------~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE-----------------------------GIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe-----------------------------cCCCCHHHHHHHH
Confidence 58999999999999999999999999999999952100 0012345556667
Q ss_pred HHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHH
Q 003468 719 RLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 719 ~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
+.++...+.+++|||+.||++|++.|++++||+ ++.+.++..|++|+..++-.+.+.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~v~ 148 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGAVR 148 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCHHH
Confidence 777666788999999999999999999999999 677888999999988766665543
No 55
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.05 E-value=9.4e-10 Score=108.62 Aligned_cols=129 Identities=15% Similarity=0.122 Sum_probs=96.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE--ec
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--RA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~ 709 (817)
++.|++.+.|+.+++.| +++++||-....+..+++++|+...-.. ...+.+ ...+-. ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an--~l~~~~----------------~g~~tG~~~~ 128 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD----------------SDRVVGYQLR 128 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce--eeEEec----------------CCeeECeeec
Confidence 57999999999999985 9999999999999999999999531100 000000 000000 13
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHh
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~g 781 (817)
.++.|..+++.++..+..++++|||.||++|++.||+|||+. +.+..+++||=...-.+.+.+..++.++
T Consensus 129 ~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 577899999999888888999999999999999999999997 5555566666555555678888877654
No 56
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.03 E-value=1.5e-09 Score=112.68 Aligned_cols=65 Identities=35% Similarity=0.408 Sum_probs=54.2
Q ss_pred cHHHHHHHHhc----CCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKE----DGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.|..-++.+.+ ..+.++++||+.||++|++.|++|+||+ ++.+.+|+.|++++.+++.+|+.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 46555555543 3468999999999999999999999999 67888899999999999999987753
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.00 E-value=1.7e-09 Score=102.13 Aligned_cols=110 Identities=21% Similarity=0.231 Sum_probs=85.7
Q ss_pred HHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHHH
Q 003468 640 AIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIVR 719 (817)
Q Consensus 640 ~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 719 (817)
+|++|+++|+++.++|++....+..+++.+|+...- . .....|+-..++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~--------~---------------------~~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLY--------Q---------------------GQSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEE--------e---------------------cccchHHHHHHHHH
Confidence 899999999999999999999999999999985210 0 00122333344455
Q ss_pred HHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH-HHHHHH
Q 003468 720 LLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT-IVAAVG 779 (817)
Q Consensus 720 ~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~-i~~~i~ 779 (817)
.++...+.++++||+.||++|++.|+++++|. ++.+..+..|++++..+.-.+ +.++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 55555678999999999999999999999999 677788999999998775444 666653
No 58
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.88 E-value=3e-08 Score=103.78 Aligned_cols=66 Identities=24% Similarity=0.257 Sum_probs=52.8
Q ss_pred cHHHHHHHHh----cCC-CEEEEEcCCccCHHHhhhCCceEEeCCCccHHHH----hhc-CEEe--ccCCccHHHHHHH
Q 003468 713 HKQEIVRLLK----EDG-EVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAK----EAS-DMVL--ADDNFGTIVAAVG 779 (817)
Q Consensus 713 ~K~~iv~~l~----~~~-~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak----~~a-d~vl--~~~~~~~i~~~i~ 779 (817)
.|..-++.+. ... +.|++|||+.||++|++.|++|+||+ |+.+.+| .+| +.+. ..++-+|+.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 5655454443 456 89999999999999999999999999 6777778 666 6777 5667889998885
No 59
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.80 E-value=2.2e-08 Score=99.29 Aligned_cols=119 Identities=21% Similarity=0.233 Sum_probs=86.9
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcccc---ccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDIS---SQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.... ...++ +..+.-
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~lt-----------------G~v~g~ 138 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLT-----------------GRVVGP 138 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEe-----------------ceeeee
Confidence 6789999999999999999999999999999999999999964211000 00011 112222
Q ss_pred ecCcccHHHHHHHHhc-C---CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEecc
Q 003468 708 RAEPRHKQEIVRLLKE-D---GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~-~---~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~ 768 (817)
.+..+.|...++.+.+ . .+.+.++|||.||.|||+.||.+||.+ +.+..+..|+.....
T Consensus 139 ~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 139 ICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred ecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcCh
Confidence 3445778777755443 2 356999999999999999999999996 445556666665543
No 60
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.79 E-value=2.1e-08 Score=101.47 Aligned_cols=125 Identities=22% Similarity=0.361 Sum_probs=91.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|+++|++++++|+.....+..+++.+|+.... ...+ ...+..+...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~----~~~~---------------~~~~~~~~~~~~~ 145 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAF----ANRL---------------EVEDGKLTGLVEG 145 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE----eeEE---------------EEECCEEEEEecC
Confidence 58999999999999999999999999999999999999985311 0000 0000111111
Q ss_pred --cCcccHHHHHHHH----hcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHH
Q 003468 709 --AEPRHKQEIVRLL----KEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAA 777 (817)
Q Consensus 709 --~~p~~K~~iv~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~ 777 (817)
..+..|..+++.+ +...+.++++||+.+|++|++.||++++++ +.+.++++||+++.++++..+...
T Consensus 146 ~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 146 PIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 1122355555543 333457999999999999999999999996 567788999999999988777653
No 61
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.70 E-value=5.5e-08 Score=94.81 Aligned_cols=103 Identities=22% Similarity=0.250 Sum_probs=81.0
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHH--
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQE-- 716 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~-- 716 (817)
.+|+.|+++|+++.++||+....+..+++++|+... |. ..+.|..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------f~--g~~~k~~~l 101 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------YQ--GQSNKLIAF 101 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-------------------------------ec--CCCcHHHHH
Confidence 589999999999999999999999999999998521 11 1223433
Q ss_pred --HHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHH
Q 003468 717 --IVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIV 775 (817)
Q Consensus 717 --iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~ 775 (817)
+++.++-..+.++++||+.||++|++.|+++++++ ++.+..+..||+++..+.-.+.+
T Consensus 102 ~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~ 161 (183)
T PRK09484 102 SDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAV 161 (183)
T ss_pred HHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHH
Confidence 34444445678999999999999999999999998 67788899999999755444443
No 62
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.66 E-value=1.5e-07 Score=96.32 Aligned_cols=67 Identities=19% Similarity=0.213 Sum_probs=55.3
Q ss_pred cHHHHHHHHhcC----CCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcC----EEeccCCccHHHHHHHH
Q 003468 713 HKQEIVRLLKED----GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASD----MVLADDNFGTIVAAVGE 780 (817)
Q Consensus 713 ~K~~iv~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad----~vl~~~~~~~i~~~i~~ 780 (817)
.|...++.+.++ .+.++++||+.||.+||+.|++||+|+ ++.+.+|+.|+ +|+..++-.|+.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 565555555332 347999999999999999999999999 67888899999 88888888999999853
No 63
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.59 E-value=5.7e-07 Score=92.77 Aligned_cols=150 Identities=15% Similarity=0.202 Sum_probs=95.4
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcc-------cccc--ccCh-------------hH
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHED-------ISSQ--SITG-------------KE 687 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-------~~~~--~~~~-------------~~ 687 (817)
..+..|...++++++++.|+.++++||+....++.+.+++++..++-. ++.. .... +.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 345789999999999999999999999999999999998887532100 0000 0000 00
Q ss_pred HHHH---------------------------------HHHhHhhccC--Cc-eEE-----EecCc--ccHHHHHHHHhc-
Q 003468 688 FMDI---------------------------------HNQKNYLRQD--GG-LLF-----SRAEP--RHKQEIVRLLKE- 723 (817)
Q Consensus 688 ~~~~---------------------------------~~~~~~~~~~--~~-~v~-----~r~~p--~~K~~iv~~l~~- 723 (817)
+..+ .+....+... .. .+. ....| ..|...++.+.+
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 0000000000 00 011 12233 456666665533
Q ss_pred ---CCCEEEEEcCCccCHHHhhh-CCceEEeCCCccHHHHhhcC-------EEeccCCccHHHHHHHH
Q 003468 724 ---DGEVVAMTGDGVNDAPALKL-ADIGVAMGIAGTEVAKEASD-------MVLADDNFGTIVAAVGE 780 (817)
Q Consensus 724 ---~~~~v~~~GDg~ND~~~l~~-A~vgiamg~~~~~~ak~~ad-------~vl~~~~~~~i~~~i~~ 780 (817)
..+.|+++||+.||++|++. ++.||||+ ++.+..|+.++ ++.....-+|+.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 35789999999999999998 67999999 57777676543 76667677888888853
No 64
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.54 E-value=1.5e-07 Score=84.24 Aligned_cols=115 Identities=21% Similarity=0.311 Sum_probs=87.9
Q ss_pred HHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHHH
Q 003468 639 QAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEIV 718 (817)
Q Consensus 639 ~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv 718 (817)
-.|+.+.+.||++.++||++...+..-|+.+|+..- | .--.+|....
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~-------------------------------~--qG~~dK~~a~ 88 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL-------------------------------Y--QGISDKLAAF 88 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee-------------------------------e--echHhHHHHH
Confidence 479999999999999999999999999999999521 1 1134565444
Q ss_pred HH----HhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccH----HHHHHHHhHHHHHh
Q 003468 719 RL----LKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGT----IVAAVGEGRSIYNN 787 (817)
Q Consensus 719 ~~----l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~----i~~~i~~gR~~~~~ 787 (817)
+. ++-..+.|+++||..||.|+|+..++++|+. .+.+..++.||+|+....-.+ +.++|..++..++-
T Consensus 89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 89 EELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 43 4444678999999999999999999999999 677778999999998654433 33445555544443
No 65
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.51 E-value=5.1e-07 Score=90.25 Aligned_cols=125 Identities=20% Similarity=0.308 Sum_probs=89.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE--ec
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--RA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~ 709 (817)
++.|++.++++.|+++ +++.++|+.....+..+.+++|+...-... .... .+..+.. ..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~--~~~~----------------~~~~i~~~~~~ 128 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHS--LEVD----------------EDGMITGYDLR 128 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcce--EEEC----------------CCCeEECcccc
Confidence 3579999999999999 999999999999999999999985310000 0000 0111111 12
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCE-EeccCCccHHHHHH
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDM-VLADDNFGTIVAAV 778 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~-vl~~~~~~~i~~~i 778 (817)
.|..|...++.++..+..++|+|||.||++|.+.|++|++.+ ...+.....+++ ++. ++..+...+
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 467888888888888899999999999999999999999987 444444455565 433 355555444
No 66
>PLN02382 probable sucrose-phosphatase
Probab=98.48 E-value=2.2e-06 Score=94.16 Aligned_cols=67 Identities=22% Similarity=0.273 Sum_probs=50.4
Q ss_pred ccHHHHHHHHhc-------CCCEEEEEcCCccCHHHhhhCC-ceEEeCCCccHHHHhhc--------CEEec-cCCccHH
Q 003468 712 RHKQEIVRLLKE-------DGEVVAMTGDGVNDAPALKLAD-IGVAMGIAGTEVAKEAS--------DMVLA-DDNFGTI 774 (817)
Q Consensus 712 ~~K~~iv~~l~~-------~~~~v~~~GDg~ND~~~l~~A~-vgiamg~~~~~~ak~~a--------d~vl~-~~~~~~i 774 (817)
..|..-++.+.+ ..+.|+++||+.||++||+.|+ .||||| |+.+..|+.+ +++.. +++-+||
T Consensus 174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 357666665533 3468999999999999999999 699999 6777767643 44433 5567889
Q ss_pred HHHHH
Q 003468 775 VAAVG 779 (817)
Q Consensus 775 ~~~i~ 779 (817)
.++|+
T Consensus 253 ~~al~ 257 (413)
T PLN02382 253 IQAIG 257 (413)
T ss_pred HHHHH
Confidence 98885
No 67
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.40 E-value=1.2e-06 Score=87.30 Aligned_cols=117 Identities=21% Similarity=0.279 Sum_probs=79.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+++|++.++++.|+++|++++++|+.....+..+++.+|+... ....+...+ ..... +. .+....|
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~----~~~~~~~~~-------~g~~~-p~--~~~~~~~ 145 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV----YSNELVFDE-------KGFIQ-PD--GIVRVTF 145 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE----EEEEEEEcC-------CCeEe-cc--eeeEEcc
Confidence 5799999999999999999999999999999999999997431 000000000 00000 00 1112335
Q ss_pred ccHHHHHHHHh----cCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcC
Q 003468 712 RHKQEIVRLLK----EDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASD 763 (817)
Q Consensus 712 ~~K~~iv~~l~----~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad 763 (817)
..|...++.+. ...+.++++||+.||++|++.||++++++ .+....+.++|
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 56665555443 23567999999999999999999999997 44444455554
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.37 E-value=5.7e-07 Score=83.30 Aligned_cols=109 Identities=22% Similarity=0.358 Sum_probs=75.5
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++++.++.|++.|.+++++||--..-+..+|.++||+..+. +...+.-+..-+ +.--+.. -.-....
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~--yAN~l~fd~~Gk------~~gfd~~--~ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNI--YANELLFDKDGK------YLGFDTN--EPTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhh--hhheeeeccCCc------ccccccC--CccccCC
Confidence 68999999999999999999999999999999999999974211 000000000000 0000000 0012234
Q ss_pred cHHHHHHHHhcC--CCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 713 HKQEIVRLLKED--GEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 713 ~K~~iv~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.|..+++.+++. .+.++|+|||.||.+|+..|+.=++.|
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 688888888764 467899999999999999988888766
No 69
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.37 E-value=4.5e-06 Score=84.22 Aligned_cols=43 Identities=21% Similarity=0.332 Sum_probs=39.0
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
.+...+++.++|++|+++|++++++||+....+..+++++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999973
No 70
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.28 E-value=5.4e-06 Score=83.30 Aligned_cols=110 Identities=20% Similarity=0.148 Sum_probs=75.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccc--cccChhHHHHHHHHhHhhccCCceEE--
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISS--QSITGKEFMDIHNQKNYLRQDGGLLF-- 706 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~-- 706 (817)
-+++|++.+.++.|++.|++++++||.....+..+.+.++... .+.. ..+.+..+. ...+....+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~n~~~~~~~~~~--------~~~p~~~~~~~ 137 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYCNEADFSNEYIH--------IDWPHPCDGTC 137 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEeceeEeeCCeeE--------EeCCCCCcccc
Confidence 4689999999999999999999999999998888888875421 1110 011111100 000000000
Q ss_pred EecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 707 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.......|..+++.++...+.++|+|||.||.+|++.||+.+|-+
T Consensus 138 ~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 138 QNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred ccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 001134688999988878888999999999999999999988754
No 71
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.25 E-value=1.5e-05 Score=80.76 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=36.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
..+.++++|+.|+++|++++++||++...+..+++.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455899999999999999999999999999999999975
No 72
>PLN02954 phosphoserine phosphatase
Probab=98.18 E-value=1.3e-05 Score=81.26 Aligned_cols=127 Identities=21% Similarity=0.326 Sum_probs=82.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|+++|+++.++||.....+..+++.+|+.... +....+. + .....+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~~~~~-------------~-~~~g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFANQIL-------------F-GDSGEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEEeEEE-------------E-cCCCcEECccCC
Confidence 37899999999999999999999999999999999999985210 1000000 0 000001111
Q ss_pred ---cCcccHHHHHHHHhcC--CCEEEEEcCCccCHHHhhh--CCceEEeCCCc-cHHHHhhcCEEeccCCccHHHH
Q 003468 709 ---AEPRHKQEIVRLLKED--GEVVAMTGDGVNDAPALKL--ADIGVAMGIAG-TEVAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 709 ---~~p~~K~~iv~~l~~~--~~~v~~~GDg~ND~~~l~~--A~vgiamg~~~-~~~ak~~ad~vl~~~~~~~i~~ 776 (817)
..+..|...++.+... .+.++++||+.||+.|.+. ++++++.|... .+.....+|+++.+ +..+..
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 1123476666665443 3579999999999999888 45556655222 23345568998864 555443
No 73
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.15 E-value=4.9e-06 Score=82.17 Aligned_cols=92 Identities=25% Similarity=0.455 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc-c
Q 003468 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR-H 713 (817)
Q Consensus 635 ~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~-~ 713 (817)
+++.+.|+.++++|++++++||.....+..+++.+|+..... ....+. .........+.++. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v--~~~~~~--------------~~~~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV--IGNELF--------------DNGGGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE--EEEEEE--------------CTTCCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE--EEEeee--------------ecccceeeeeECCCCC
Confidence 888899999999999999999999999999999999964210 000000 00013345566655 4
Q ss_pred --HHHHHHHH------hcCCCEEEEEcCCccCHHHhh
Q 003468 714 --KQEIVRLL------KEDGEVVAMTGDGVNDAPALK 742 (817)
Q Consensus 714 --K~~iv~~l------~~~~~~v~~~GDg~ND~~~l~ 742 (817)
|...++.+ +.....++++|||.||++|||
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 456789999999999999996
No 74
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.15 E-value=1e-05 Score=81.68 Aligned_cols=107 Identities=19% Similarity=0.195 Sum_probs=73.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcccc--ccccChhHHHHHHHHhHhhccCCceE--EE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDIS--SQSITGKEFMDIHNQKNYLRQDGGLL--FS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v--~~ 707 (817)
+++|++.++++.|++.|+++.++|+-....+..+.+.+ +.. ..+. ...++++.+. ...+.... +.
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~--------~~kp~p~~~~~~ 142 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYIT--------ITWPHPCDEHCQ 142 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeE--------EeccCCcccccc
Confidence 57999999999999999999999999999999999887 633 1111 0111111100 00000000 00
Q ss_pred ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 708 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
......|..+++.++.....++++|||.||++|.+.||+.+|
T Consensus 143 ~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 143 NHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 000134888999888888899999999999999999999776
No 75
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.15 E-value=2e-05 Score=81.72 Aligned_cols=140 Identities=16% Similarity=0.220 Sum_probs=84.3
Q ss_pred CCcHHHHHHHHHHHH-cCCeEEEECCCCHhhHHHHHHHhCCC--CCC--------ccccccccChhHHHHHHHHh-----
Q 003468 632 PPREEVRQAIEDCKA-AGIRVMVITGDNKNTAEAICREIGVF--GAH--------EDISSQSITGKEFMDIHNQK----- 695 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~--~~~--------~~~~~~~~~~~~~~~~~~~~----- 695 (817)
.+.+++.++|+.|++ .|+.++++|||+...+..+.+.+++. ..+ .......+..+....+....
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 467899999999998 79999999999999999888776642 110 00000111211111110000
Q ss_pred --------------------------------Hhhc-cCC------ceEEEecCc--ccHHHHHHHHhc----CCCEEEE
Q 003468 696 --------------------------------NYLR-QDG------GLLFSRAEP--RHKQEIVRLLKE----DGEVVAM 730 (817)
Q Consensus 696 --------------------------------~~~~-~~~------~~v~~r~~p--~~K~~iv~~l~~----~~~~v~~ 730 (817)
..+. ... ..-+....| .+|...++.+.+ ..+.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 000 001112222 466665555433 2468999
Q ss_pred EcCCccCHHHhhhC----CceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 731 TGDGVNDAPALKLA----DIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 731 ~GDg~ND~~~l~~A----~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+||+.||.+||+.+ ++||+||+ +. ..|++.+.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~-a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGT-GA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECC-CC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 99999994 43 347887764 55555554
No 76
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.13 E-value=1.1e-05 Score=81.50 Aligned_cols=127 Identities=22% Similarity=0.354 Sum_probs=93.8
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA 709 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 709 (817)
...+-|++++++..|+++|++..++|++....+..+.+..|+...-..+.. + ...-....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----~----------------~~~~~~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----G----------------DDVPPPKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc----C----------------CCCCCCCc
Confidence 446789999999999999999999999999999999999999653211100 0 00011123
Q ss_pred CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCC---ceEEeCCC-ccHHHHhhcCEEeccCCccHHHHHH
Q 003468 710 EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD---IGVAMGIA-GTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~---vgiamg~~-~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.|.....+++.+....+.++||||..+|+.|-+.|+ |||..|.+ ........+|+++.+ +..+...+
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 455556677777766568999999999999999999 77888843 445666779999865 66655544
No 77
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.08 E-value=3.7e-05 Score=87.00 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=40.4
Q ss_pred EEeccCCC-CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 625 GMVGLRDP-PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 625 G~~~~~d~-~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
|.+.-.|. ..+.+.++|++|+++|+.++++||+....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44444333 5578899999999999999999999999999999999973
No 78
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.07 E-value=1.7e-05 Score=80.53 Aligned_cols=128 Identities=23% Similarity=0.321 Sum_probs=89.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.++.|++.++++.|++.|++++++|+........+.+.+|+..... ..+..+. .-.....
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~----------------~~~~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDS----------------LPNKKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCC----------------CCCCCcC
Confidence 3578999999999999999999999999999999999999853211 0110000 0001112
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc-eEEe--CCC-ccHHHHhhcCEEeccCCccHHHHHHHH
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI-GVAM--GIA-GTEVAKEASDMVLADDNFGTIVAAVGE 780 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giam--g~~-~~~~ak~~ad~vl~~~~~~~i~~~i~~ 780 (817)
|+--..+++.++...+.++++||+.||+.+.+.||+ +|.+ |.. ..+.....+++++. ++..+...+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 333355677777777889999999999999999999 4444 321 23444567888874 47777777644
No 79
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.01 E-value=2e-05 Score=77.45 Aligned_cols=114 Identities=21% Similarity=0.223 Sum_probs=75.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe-c
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR-A 709 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~ 709 (817)
-++.+++.+.++.|++.|++++++|+........+.+..|+...-..+ ++.+...+-.... .....+...+.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i----~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEI----YSNPASFDNDGRH-IVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEE----eccCceECCCCcE-EEecCCCCccCcCC
Confidence 368899999999999999999999999999999999999885321111 1100000000000 000000000000 1
Q ss_pred CcccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCceEE
Q 003468 710 EPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 710 ~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
....|..+++.++.. .+.++++|||.||++|.+.||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123588899998887 8899999999999999999988665
No 80
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.00 E-value=1.9e-05 Score=78.85 Aligned_cols=125 Identities=20% Similarity=0.298 Sum_probs=86.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+++++|+++|+++.++|+.....+....+.+|+...-.. .+.. ......+..|
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~----i~~~----------------~~~~~~KP~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH----VIGS----------------DEVPRPKPAP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee----EEec----------------CcCCCCCCCh
Confidence 6789999999999999999999999999999988899998531110 0000 0000112233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE---eCC-CccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA---MGI-AGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia---mg~-~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++-..+.+++|||+.+|+.+-+.||+... -|. ...+..+..+|+++.+ +..+..++
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 33355666676667889999999999999999999743 331 2233456789998754 55555544
No 81
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.98 E-value=2.6e-05 Score=77.65 Aligned_cols=104 Identities=18% Similarity=0.229 Sum_probs=74.9
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE---
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF--- 706 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--- 706 (817)
..++++++.+.++.++++|++++++|+.....+..+++.+|+...- ...+. ...+...-
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~----~~~l~--------------~~~~g~~~g~~ 146 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAI----GTRLE--------------ESEDGIYTGNI 146 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceE----ecceE--------------EcCCCEEeCCc
Confidence 4568999999999999999999999999999999999999985310 00000 00000010
Q ss_pred --EecCcccHHHHHHHHh-cC---CCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 707 --SRAEPRHKQEIVRLLK-ED---GEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 707 --~r~~p~~K~~iv~~l~-~~---~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
..+.++.|...++.+. +. .+.++++||+.+|.+|++.|+.++++.
T Consensus 147 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 147 DGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred cCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 1234567776665543 22 347899999999999999999999886
No 82
>PTZ00174 phosphomannomutase; Provisional
Probab=97.96 E-value=8.4e-05 Score=76.41 Aligned_cols=54 Identities=24% Similarity=0.281 Sum_probs=42.0
Q ss_pred ccHHHHHHHHhcCCCEEEEEcC----CccCHHHhhhC-CceEEeCCCccHHHHhhcCEEe
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGD----GVNDAPALKLA-DIGVAMGIAGTEVAKEASDMVL 766 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GD----g~ND~~~l~~A-~vgiamg~~~~~~ak~~ad~vl 766 (817)
.+|..-++.+.+..+.|++||| |.||++||+.| -.|++++ ++.+..|..|.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4577777777666789999999 99999999966 5667667 67888787776543
No 83
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.95 E-value=1.9e-05 Score=76.84 Aligned_cols=94 Identities=29% Similarity=0.403 Sum_probs=68.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE------
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF------ 706 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~------ 706 (817)
++|++.+.++.+++.|++++++||.....+..+++.+|+... ....+..+ .+..+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~----~~~~~~~~--------------~~g~~~g~~~~~ 135 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV----FANRLEFD--------------DNGLLTGPIEGQ 135 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh----eeeeEEEC--------------CCCEEeCccCCc
Confidence 579999999999999999999999999999999999998531 00000000 000000
Q ss_pred EecCcccHHHHHHHHhcC----CCEEEEEcCCccCHHHhhhC
Q 003468 707 SRAEPRHKQEIVRLLKED----GEVVAMTGDGVNDAPALKLA 744 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~----~~~v~~~GDg~ND~~~l~~A 744 (817)
....+..|...++.+... .+.++++|||.||++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 123457788888776543 46799999999999999876
No 84
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.89 E-value=3.5e-05 Score=71.02 Aligned_cols=118 Identities=23% Similarity=0.300 Sum_probs=77.2
Q ss_pred ccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 628 GLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 628 ~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
....++.+++.+.++.|+++|++++++||.....+...++.+|+......+ +......................+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPV----ITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhhe----eccchhhhhcccccccccccccccC
Confidence 445688999999999999999999999999999999999999874221111 1000000000000000001122233
Q ss_pred ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC-CceEE
Q 003468 708 RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA-DIGVA 749 (817)
Q Consensus 708 r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A-~vgia 749 (817)
+..|+.+..+.+.+....+.++++||+.+|++|++.+ .-+|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 4556666777777777778899999999999999984 44443
No 85
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.87 E-value=5.9e-05 Score=78.66 Aligned_cols=121 Identities=17% Similarity=0.259 Sum_probs=85.0
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE---
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--- 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--- 707 (817)
.++.|++.++++.|++.|++++++|+.+...+..+.+..|+.... +..+.+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--------------------------~~i~~~d~~ 153 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--------------------------RWIIGGDTL 153 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--------------------------eEEEecCCC
Confidence 367899999999999999999999999998888888888874311 111111
Q ss_pred ---ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEe--CCC-ccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 708 ---RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAM--GIA-GTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 708 ---r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iam--g~~-~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
...|+--..+++.++-..+.+++|||+.||+.|.+.||+. +++ |.. ..+..+..+|+++. ++..+..++.
T Consensus 154 ~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred CCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 1222223455666666678899999999999999999984 343 311 22234557899885 4777766543
No 86
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.86 E-value=0.00014 Score=74.01 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=38.8
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
+...+.+.++|++|+++||.++++||+.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 346788999999999999999999999999999999999984
No 87
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.75 E-value=9.4e-05 Score=74.39 Aligned_cols=124 Identities=24% Similarity=0.283 Sum_probs=85.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+.|++.++++.|+++|+++.++|+.....+..+.+..|+...-.. ++..+ ..-..+..|+
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~----i~~~~----------------~~~~~Kp~p~ 142 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV----VITLD----------------DVEHAKPDPE 142 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE----EEecC----------------cCCCCCCCcH
Confidence 679999999999999999999999999999999999998542110 00000 0000122344
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce---EEeCCCccH-HHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG---VAMGIAGTE-VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg---iamg~~~~~-~ak~~ad~vl~~~~~~~i~~~i 778 (817)
--.++++.++...+.+++|||+.+|+.+-+.||+- |+-|....+ .....+|+++.+ +..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 44566667766678899999999999999999995 333421222 334568888754 66666654
No 88
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.69 E-value=0.00029 Score=70.29 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=36.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
++.+++.+++++|++.|++++++||+....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 478999999999999999999999999999999988754
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.68 E-value=0.0001 Score=74.16 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=82.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+..+.+..|+...-.. ++..+ ..-..+..|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----~~~~~----------------~~~~~Kp~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV----LIGGD----------------SLAQRKPHP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE----EEecC----------------CCCCCCCCh
Confidence 4788999999999999999999999999999999999998532110 00000 000011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE-e--CCCc-cHHHHhhcCEEeccCCccHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA-M--GIAG-TEVAKEASDMVLADDNFGTIV 775 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia-m--g~~~-~~~ak~~ad~vl~~~~~~~i~ 775 (817)
+-=..+++.++...+.++++||+.+|+.+.+.||+-.. + |... .+.....||+++.+ +..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~ 210 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELP 210 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHH
Confidence 33355666666667889999999999999999998754 3 3111 12334568888754 44443
No 90
>PRK08238 hypothetical protein; Validated
Probab=97.64 E-value=0.00026 Score=79.04 Aligned_cols=99 Identities=21% Similarity=0.334 Sum_probs=73.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
|++|++.+.+++++++|++++++|+.+...+..+++.+|+... ++..+ . ..+..|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-------Vigsd---------------~---~~~~kg 126 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-------VFASD---------------G---TTNLKG 126 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-------EEeCC---------------C---ccccCC
Confidence 4789999999999999999999999999999999999997310 11000 0 013456
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV 757 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ 757 (817)
+.|...+...... +.+.++||+.+|.+|++.|+-.++++ .+...
T Consensus 127 ~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 127 AAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred chHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 6675544432222 23678899999999999999999998 44443
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.61 E-value=0.00058 Score=69.86 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=84.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+++|++.+.++.|++.|+++.++||-....+..+.+++|+......+.+..+.-. .+...-.-..|
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~--------------~dGvltG~~~P 186 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFD--------------EDGVLKGFKGP 186 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEEC--------------CCCeEeCCCCC
Confidence 5799999999999999999999999999999999999998643322211111000 00111111112
Q ss_pred ----ccHHHHH-----HHHh--cCCCEEEEEcCCccCHHHhhhC-C--ceEEeC--CCccH----HHHhhcCEEeccCCc
Q 003468 712 ----RHKQEIV-----RLLK--EDGEVVAMTGDGVNDAPALKLA-D--IGVAMG--IAGTE----VAKEASDMVLADDNF 771 (817)
Q Consensus 712 ----~~K~~iv-----~~l~--~~~~~v~~~GDg~ND~~~l~~A-~--vgiamg--~~~~~----~ak~~ad~vl~~~~~ 771 (817)
..|.+.+ +.++ .....|+++|||.||++|..-. . --+..| |...+ .-+++=|+|+.+|.-
T Consensus 187 ~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t 266 (277)
T TIGR01544 187 LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDET 266 (277)
T ss_pred cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCC
Confidence 3454432 2333 3457899999999999995433 1 112222 22222 356788999998876
Q ss_pred cHHHHHH
Q 003468 772 GTIVAAV 778 (817)
Q Consensus 772 ~~i~~~i 778 (817)
-.++.+|
T Consensus 267 ~~v~~~i 273 (277)
T TIGR01544 267 LEVANSI 273 (277)
T ss_pred chHHHHH
Confidence 6666665
No 92
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.60 E-value=0.00026 Score=71.92 Aligned_cols=125 Identities=14% Similarity=0.088 Sum_probs=85.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.+...+..+.+..|+...-.. .+.++ ..-..+..|
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~----i~~~~----------------~~~~~KP~p 154 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAV----LIGGD----------------TLAERKPHP 154 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccE----EEecC----------------cCCCCCCCH
Confidence 4689999999999999999999999999888888888887532110 00000 000112334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE-e--CCC-cc-HHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA-M--GIA-GT-EVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia-m--g~~-~~-~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+--..+++.++...+.+++|||+.+|+.|-+.||+... + |.. .. ......+|+++.+ +..+...+
T Consensus 155 ~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~ 224 (229)
T PRK13226 155 LPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPA 224 (229)
T ss_pred HHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHh
Confidence 44466777787778899999999999999999998743 2 311 11 2234568998854 55555443
No 93
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.56 E-value=0.00042 Score=71.33 Aligned_cols=118 Identities=15% Similarity=0.189 Sum_probs=82.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+....+.+|+...-. .++.+++ .-..+..|
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~iv~~~~----------------~~~~KP~p 167 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----AVIIGSE----------------CEHAKPHP 167 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc----EEEecCc----------------CCCCCCCh
Confidence 467899999999999999999999999999999999999854211 0111110 00112334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE-e--CCCccHHHHhhcCEEeccC
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA-M--GIAGTEVAKEASDMVLADD 769 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia-m--g~~~~~~ak~~ad~vl~~~ 769 (817)
+--...++.++...+.+++|||+.+|+.+-+.|++-.. + |....+.....+|+++.+-
T Consensus 168 ~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 168 DPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 44466677777777889999999999999999998633 2 3111223344688888653
No 94
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.53 E-value=0.00023 Score=72.04 Aligned_cols=118 Identities=19% Similarity=0.197 Sum_probs=79.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
-++.|++.++++.|++.|++++++|+........+.+.+|+...-.. .+..+ ..-..+..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----~~~~~----------------~~~~~Kp~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA----LASAE----------------KLPYSKPH 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE----EEEcc----------------cCCCCCCC
Confidence 35789999999999999999999999999999999999998542110 00000 00011223
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCcc---HHHHhhcCEEecc
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGT---EVAKEASDMVLAD 768 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~---~~ak~~ad~vl~~ 768 (817)
|+-=..+++.++...+.++++||+.||+.+.+.||+....-..+. +.-...||+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 333345556666666889999999999999999998854321221 1223457777643
No 95
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.52 E-value=0.00065 Score=67.70 Aligned_cols=106 Identities=15% Similarity=0.133 Sum_probs=74.2
Q ss_pred CCcHHHHHHHH-HHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIE-DCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~-~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.+.|++.++|+ .++++|++++++|+-....+..+|+..++......+ ...+. ....+...-..|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i-~t~le-------------~~~gg~~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLI-ASQIE-------------RGNGGWVLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEE-EEEeE-------------EeCCceEcCccCC
Confidence 46899999995 788899999999999999999999997664321111 11000 0000111112356
Q ss_pred cccHHHHHHH-HhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 711 PRHKQEIVRL-LKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 711 p~~K~~iv~~-l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.++|.+-++. +....+...+-||+.||.|||+.||.+++++
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 6888776654 3434456679999999999999999999986
No 96
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.51 E-value=0.00076 Score=69.14 Aligned_cols=69 Identities=26% Similarity=0.288 Sum_probs=44.6
Q ss_pred ccHHHHHHHHhcC----CCEEEEEcCCccCHHHhhhCCceEEeCCCccHH----HHhhc---C-EEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKED----GEVVAMTGDGVNDAPALKLADIGVAMGIAGTEV----AKEAS---D-MVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~----ak~~a---d-~vl~~~~~~~i~~~i~ 779 (817)
..|...+++++.+ .+.|+++||+.||.+||..++-||.+||+..+. ..... . +....+.-.||+++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5687777777654 357899999999999999999999999544441 22222 2 4444545567777765
Q ss_pred H
Q 003468 780 E 780 (817)
Q Consensus 780 ~ 780 (817)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 97
>PRK11590 hypothetical protein; Provisional
Probab=97.46 E-value=0.00097 Score=66.76 Aligned_cols=106 Identities=15% Similarity=0.093 Sum_probs=74.8
Q ss_pred CCcHHHHHHH-HHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAI-EDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I-~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.+.|++.+.| +.+++.|++++++|+....-+..+++.+|+......+ ...+.. .......-..+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i-~t~l~~-------------~~tg~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI-ASQMQR-------------RYGGWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE-EEEEEE-------------EEccEECCccCC
Confidence 4589999999 6788899999999999999999999999963211111 111000 000111122356
Q ss_pred cccHHHHHHHH-hcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 711 PRHKQEIVRLL-KEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 711 p~~K~~iv~~l-~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.+.|..-++.. ........+-||+.||.|||+.|+.+++++
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 68887766644 444556779999999999999999999996
No 98
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.42 E-value=0.00086 Score=69.71 Aligned_cols=119 Identities=13% Similarity=0.179 Sum_probs=82.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA-- 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~-- 709 (817)
++-|++.++++.|++.|+++.++|+.....+..+.+.+|+...-. ..+.+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--------------------------~vi~~~~~~ 195 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--------------------------VVQAGTPIL 195 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--------------------------EEEecCCCC
Confidence 467899999999999999999999999999999999999853211 0111111
Q ss_pred -CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE---eCCCccH-HHHhhcCEEeccCCccHHHHHH
Q 003468 710 -EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA---MGIAGTE-VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 710 -~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia---mg~~~~~-~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.|+--..+++.++...+.+++|||+.+|+.+-+.|++-.. -|.+..+ .....+|+++.+ +..+...+
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 1222233344455556789999999999999999998743 2311212 334568998854 66666654
No 99
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.40 E-value=0.00055 Score=69.17 Aligned_cols=123 Identities=22% Similarity=0.285 Sum_probs=81.7
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC--CCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF--GAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
.++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. ..-. ..+...+. -..+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~----~i~~~~~~----------------~~~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD----AVVCPSDV----------------AAGR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC----EEEcCCcC----------------CCCC
Confidence 368999999999999999999999999999999999999985 2111 11111000 0012
Q ss_pred cCcccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCceEE--eCCCcc---H-HHHhhcCEEeccCCccHHHH
Q 003468 709 AEPRHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIGVA--MGIAGT---E-VAKEASDMVLADDNFGTIVA 776 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgia--mg~~~~---~-~ak~~ad~vl~~~~~~~i~~ 776 (817)
..|+-=...++.+... .+.+++|||+.+|+.+-+.||+.++ +. .+. + .....+++++.+ +..+..
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~--~~~l~~ 217 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDS--VADLPA 217 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecC--HHHHHH
Confidence 2333334455556554 4789999999999999999999862 32 221 1 223457777643 444443
No 100
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.38 E-value=0.00098 Score=69.52 Aligned_cols=101 Identities=19% Similarity=0.169 Sum_probs=68.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++-|++.++++.|++.|+++.++|+.....+..+.+..|+.....+ .++..+ ..-..+..|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d---~i~~~~----------------~~~~~KP~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPD---HVVTTD----------------DVPAGRPYP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCce---EEEcCC----------------cCCCCCCCh
Confidence 4678999999999999999999999999988888887776432100 000000 000112233
Q ss_pred ccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCc---eEEeC
Q 003468 712 RHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADI---GVAMG 751 (817)
Q Consensus 712 ~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~v---giamg 751 (817)
+-=...++.++.. .+.+++|||+.+|+.+-+.||+ ||.-|
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 3334555566543 4679999999999999999997 45444
No 101
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.29 E-value=0.0014 Score=67.64 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=80.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-. .++++++ .-.....|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~ii~~~d----------------~~~~KP~P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS----VVLAAED----------------VYRGKPDP 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc----EEEeccc----------------CCCCCCCH
Confidence 468999999999999999999999999999999999999853211 1111110 00112334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeCCCccHHHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg~~~~~~ak~~ad~vl~~ 768 (817)
+-=...++.++-..+.+++|||+.+|+.+-+.||+-+ ++...........+|+++.+
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 4445667777777788999999999999999999853 33212222223357887654
No 102
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.29 E-value=0.0011 Score=68.67 Aligned_cols=97 Identities=20% Similarity=0.195 Sum_probs=69.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+..... ..++..++ .-..+..|
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~----------------~~~~KP~p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDD----------------VPAGRPAP 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEcccc----------------CCCCCCCH
Confidence 357899999999999999999999999999999999988854210 01111110 00112334
Q ss_pred ccHHHHHHHHhcC-CCEEEEEcCCccCHHHhhhCCce
Q 003468 712 RHKQEIVRLLKED-GEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 712 ~~K~~iv~~l~~~-~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
+--...++.+... .+.+++|||+.+|+.+-+.||+-
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 4445556666653 57799999999999999999976
No 103
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.28 E-value=0.0043 Score=74.24 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=85.8
Q ss_pred CCcHHHHHHHHHHHH-cCCeEEEECCCCHhhHHHHHHHhCCC--C--------CCccccccccCh---------------
Q 003468 632 PPREEVRQAIEDCKA-AGIRVMVITGDNKNTAEAICREIGVF--G--------AHEDISSQSITG--------------- 685 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~--~--------~~~~~~~~~~~~--------------- 685 (817)
.+.+++.+++++|.+ .|+.|+++||+...........+++. . .+..+.......
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 59999999999999888776655531 0 000100000000
Q ss_pred -----------------------hHHHH-----HHHHhHh-hcc-------CCceEEEecCcccHHHHHHHHhcC--CCE
Q 003468 686 -----------------------KEFMD-----IHNQKNY-LRQ-------DGGLLFSRAEPRHKQEIVRLLKED--GEV 727 (817)
Q Consensus 686 -----------------------~~~~~-----~~~~~~~-~~~-------~~~~v~~r~~p~~K~~iv~~l~~~--~~~ 727 (817)
.++.. +...... +.. .+..+-.+....+|...++.+.+. .+.
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 01100 0000001 000 111122223335788777777653 468
Q ss_pred EEEEcCCccCHHHhhhC---CceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 728 VAMTGDGVNDAPALKLA---DIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 728 v~~~GDg~ND~~~l~~A---~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
++++||+.||.+||+.+ +++|+||+ + +.+|++.+.+. +.+...+
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVGP-G----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEECC-C----CCcceEeCCCH--HHHHHHH
Confidence 99999999999999996 69999994 3 56799999864 4555555
No 104
>PRK11587 putative phosphatase; Provisional
Probab=97.27 E-value=0.0013 Score=66.34 Aligned_cols=116 Identities=15% Similarity=0.107 Sum_probs=77.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+....+..|+... ...++.++. -.....|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-----~~i~~~~~~----------------~~~KP~p 141 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-----EVFVTAERV----------------KRGKPEP 141 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-----cEEEEHHHh----------------cCCCCCc
Confidence 4689999999999999999999999887776666666776321 011111110 0012334
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCCCccHHHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~~~~~~ak~~ad~vl~~ 768 (817)
+--....+.++-..+.+++|||+.+|+.+-+.||+- |++...........+|+++.+
T Consensus 142 ~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 142 DAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 444555666777778999999999999999999985 555422222223457777654
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.18 E-value=0.0016 Score=65.61 Aligned_cols=87 Identities=21% Similarity=0.338 Sum_probs=62.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCC----HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDN----KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
.+.++++++++.+++.|+++.++|++. ..++..+.+..|+...+. ...+++
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~-------------------------f~vil~ 168 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM-------------------------NPVIFA 168 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc-------------------------eeEEEc
Confidence 367889999999999999999999975 568888888899942210 011222
Q ss_pred ecCc--ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 708 RAEP--RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 708 r~~p--~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
..++ ..|...++ +.+ .++++||..+|..+-+.||+-
T Consensus 169 gd~~~K~~K~~~l~---~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 169 GDKPGQYTKTQWLK---KKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCCCHHHHHH---hcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 2221 34554443 333 489999999999999999986
No 106
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.13 E-value=0.0011 Score=66.79 Aligned_cols=83 Identities=20% Similarity=0.352 Sum_probs=60.4
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCC----CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGD----NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+.+.++++++.++++|+++.++|++ ...++..+.+.+|+.... ..+++.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---------------------------~~i~~~ 167 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---------------------------PVIFAG 167 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---------------------------eEEECC
Confidence 4455999999999999999999998 667899999999995321 111111
Q ss_pred -c----CcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 709 -A----EPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 709 -~----~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
. .| +|.. .+++.+ .++++||..||+.+-+.|++-
T Consensus 168 d~~~~~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 168 DKPGQYQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCCCCCCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 1 12 2332 334433 479999999999999999875
No 107
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.05 E-value=0.0014 Score=64.88 Aligned_cols=93 Identities=18% Similarity=0.116 Sum_probs=67.6
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
+++.+.+.++++.|++.|+++.++||.....+..+.+.+|+...-.. .+.. .. +..+..
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~----~~~~----------------~~-~~~KP~ 163 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPV----QIWM----------------ED-CPPKPN 163 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCE----EEee----------------cC-CCCCcC
Confidence 44566679999999999999999999999999999999998532110 0000 00 011334
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 744 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A 744 (817)
|+.-..+++.++...+.+++|||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5554666777777778899999999999987654
No 108
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.05 E-value=0.0023 Score=68.81 Aligned_cols=120 Identities=15% Similarity=0.178 Sum_probs=82.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+...-.. ++.+++ .......|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~----Iv~sdd----------------v~~~KP~P 275 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV----IVAAED----------------VYRGKPDP 275 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE----EEecCc----------------CCCCCCCH
Confidence 3679999999999999999999999999999999999998532111 111000 00011233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeCCCccHH-HHhhcCEEeccCCccHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMGIAGTEV-AKEASDMVLADDNFGTI 774 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg~~~~~~-ak~~ad~vl~~~~~~~i 774 (817)
+-=...++.++...+.+++|||..+|+.+-+.|++-. ++. .+.+. -...||+++.+ +..+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHH
Confidence 3345567777777889999999999999999999973 333 32222 12358888754 5544
No 109
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.99 E-value=0.002 Score=63.88 Aligned_cols=98 Identities=14% Similarity=0.221 Sum_probs=70.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+++++|+++|++++++|+-+........+.+|+...-. .++..++. -.....|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~----------------~~~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD----AVLSADAV----------------RAYKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh----eeEehhhc----------------CCCCCCH
Confidence 467999999999999999999999999998888889999743111 11111100 0011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
+-=..+.+.++...+.+++|||+.+|+.+-+.||+-..
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 32355666777677889999999999999999998743
No 110
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.98 E-value=0.004 Score=60.63 Aligned_cols=126 Identities=22% Similarity=0.188 Sum_probs=72.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHh---------------hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHh
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKN---------------TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY 697 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (817)
+.|++.+++++|++.|+++.++|..+.. ....+.+..|+... ..+.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-~i~~~~~~~~------------ 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-GIYYCPHHPE------------ 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-eEEECCCCCC------------
Confidence 5799999999999999999999987631 11122333443100 0000000000
Q ss_pred hccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeCCCcc--H-HHHhhc--CEEeccCCc
Q 003468 698 LRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMGIAGT--E-VAKEAS--DMVLADDNF 771 (817)
Q Consensus 698 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg~~~~--~-~ak~~a--d~vl~~~~~ 771 (817)
...-..+..|+--..+++.++...+.+++|||+.+|+.+-+.||+.. .+. .|. + .....+ |+++.+ +
T Consensus 97 ----~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~--l 169 (181)
T PRK08942 97 ----DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS--L 169 (181)
T ss_pred ----CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--H
Confidence 00001123344445666777777789999999999999999999852 232 221 1 122335 777643 5
Q ss_pred cHHHHHH
Q 003468 772 GTIVAAV 778 (817)
Q Consensus 772 ~~i~~~i 778 (817)
..+...+
T Consensus 170 ~el~~~l 176 (181)
T PRK08942 170 ADLPQAL 176 (181)
T ss_pred HHHHHHH
Confidence 5555544
No 111
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.88 E-value=0.0083 Score=57.39 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 636 EVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 636 ~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
.+.+.+.+|+++|++|+++|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4568999999999999999999999999999999985
No 112
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.87 E-value=0.0038 Score=57.25 Aligned_cols=93 Identities=23% Similarity=0.246 Sum_probs=66.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCC--------HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDN--------KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGG 703 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (817)
++.|++.++++.|+++|++++++|+.. ......+.+.+|+.... .... .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~-----------------~- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-----LYAC-----------------P- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-----EEEC-----------------C-
Confidence 568999999999999999999999998 67778888888874210 0000 0
Q ss_pred eEEEecCcccHHHHHHHH-hcCCCEEEEEcC-CccCHHHhhhCCceE
Q 003468 704 LLFSRAEPRHKQEIVRLL-KEDGEVVAMTGD-GVNDAPALKLADIGV 748 (817)
Q Consensus 704 ~v~~r~~p~~K~~iv~~l-~~~~~~v~~~GD-g~ND~~~l~~A~vgi 748 (817)
-..+..|+-=..+++.+ +-..+.+++||| ..+|+.+-+.|++-.
T Consensus 82 -~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 -HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred -CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 00122233335666677 366788999999 699999999998753
No 113
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.87 E-value=0.0019 Score=59.78 Aligned_cols=106 Identities=18% Similarity=0.290 Sum_probs=74.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC----CCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG----VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
.++|+-++.++.+++.+++++++|+....-...+-+.++ +...+ ..+.+....... ...+++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~id------i~sn~~~ih~dg-------~h~i~~~ 139 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCID------IVSNNDYIHIDG-------QHSIKYT 139 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeE------EeecCceEcCCC-------ceeeecC
Confidence 378999999999999999999999998888888887766 21100 000000000000 0112222
Q ss_pred ecC--cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 708 RAE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 708 r~~--p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
..+ ..+|...|+.+.+..+.+.++|||..|+++-+.+|+=.|-
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 222 3678999999999999999999999999999999988853
No 114
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.86 E-value=0.003 Score=63.79 Aligned_cols=94 Identities=18% Similarity=0.126 Sum_probs=69.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|+++|+++.++|+.....+....+..|+...- +..+.+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--------------------------d~iv~s~~~~ 146 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--------------------------DLLLSTHTFG 146 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--------------------------CEEEEeeeCC
Confidence 56899999999999999999999999888888877888874311 1112211
Q ss_pred -cC--cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce--EEeC
Q 003468 709 -AE--PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG--VAMG 751 (817)
Q Consensus 709 -~~--p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg--iamg 751 (817)
.. |+-=..+.+.++-..+.+++|||+.+|+.+-+.||+. +++.
T Consensus 147 ~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 147 YPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred CCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 12 2323445566666678899999999999999999996 4444
No 115
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.85 E-value=0.0063 Score=57.44 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=64.4
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH---HHHHHh---C--CCCCCccccccccChhHHHHHHHHhHhhccC
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE---AICREI---G--VFGAHEDISSQSITGKEFMDIHNQKNYLRQD 701 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (817)
+|.+.+++.+++++++++|++++++||+....+. ....++ | +.. . .+ ....+..+....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g-~l--i~~~g~~~~~~~--------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-G-PV--LLSPDRLFAALH--------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-c-eE--EEcCCcchhhhh---------
Confidence 5788999999999999999999999999998874 455552 2 321 0 00 000111110000
Q ss_pred CceEEEecCc-ccHHHHHHHHhc-----CCCEEEEEcCCccCHHHhhhCCce
Q 003468 702 GGLLFSRAEP-RHKQEIVRLLKE-----DGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 702 ~~~v~~r~~p-~~K~~iv~~l~~-----~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
+. +. ...| +.|...++.+.+ ....++.+|++.+|+.+-++++|.
T Consensus 92 ~e-~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 RE-VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred cc-cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 00 11 1223 337666666655 345677899999999998887764
No 116
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.83 E-value=0.0044 Score=65.92 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=76.2
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 629 LRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 629 ~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
..+++.+++.++++.|++.|++++++||+....+..+.+.+|+..... ......+. ...++..... .+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f---~~i~~~~~------~~~~~~~~~~---~k 251 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF---DDLIGRPP------DMHFQREQGD---KR 251 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch---hhhhCCcc------hhhhcccCCC---CC
Confidence 567899999999999999999999999999999999999998853100 00000000 0000100000 13
Q ss_pred cCcccHHHHHHHHhc-CCCEEEEEcCCccCHHHhhhCCceE
Q 003468 709 AEPRHKQEIVRLLKE-DGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~-~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
..|+-+...++.+.. ....++||||..+|+.+-+.||+-+
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 456677777776655 4578999999999999999999884
No 117
>PRK06769 hypothetical protein; Validated
Probab=96.76 E-value=0.0038 Score=60.18 Aligned_cols=98 Identities=13% Similarity=0.041 Sum_probs=62.2
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHh--------hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCce
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKN--------TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGL 704 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (817)
+-|++++++++|++.|+++.++|+.... ......+..|+... +......+ ...
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~----------------~~~ 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI---YLCPHKHG----------------DGC 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE---EECcCCCC----------------CCC
Confidence 6799999999999999999999987642 12222334444210 00000000 000
Q ss_pred EEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 705 LFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 705 v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
-..+..|+-=..+++.++...+.+++|||..+|+.+-+.|++-..
T Consensus 90 ~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 90 ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 011233444456666676667889999999999999999998754
No 118
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.76 E-value=0.0035 Score=63.31 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=70.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|++++++|+-....+....+.+|+...-.. ++..+ ..-..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~----i~~~~----------------~~~~~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDA----VITSE----------------EEGVEKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccE----EEEec----------------cCCCCCCCH
Confidence 4789999999999999999999999998888888888888432110 00000 000012223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce-EEeC
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG-VAMG 751 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg-iamg 751 (817)
+--..+++.+....+.+++|||.. +|+.+-+.||+- |.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 333455666666667899999998 999999999985 4444
No 119
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.68 E-value=0.0076 Score=63.32 Aligned_cols=119 Identities=18% Similarity=0.202 Sum_probs=76.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+........+.+..+.......+ ..+.+++ .-..+..|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~----------------~~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGL--DVFAGDD----------------VPKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCce--EEEeccc----------------cCCCCCCH
Confidence 47899999999999999999999999888887776655322110000 0001100 00012233
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccH--HHHhhcCEEecc
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTE--VAKEASDMVLAD 768 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~--~ak~~ad~vl~~ 768 (817)
+-=..+++.++-..+.+++|||+.+|+.+-+.||+.+..-..+.. .....+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 344556677776778899999999999999999988544323321 112357888754
No 120
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.64 E-value=0.0023 Score=61.68 Aligned_cols=91 Identities=23% Similarity=0.350 Sum_probs=70.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|++.|++++++|+.+........+.+|+...- +..+.+.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f--------------------------~~i~~~~~~~ 130 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF--------------------------DEIISSDDVG 130 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC--------------------------SEEEEGGGSS
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc--------------------------ccccccchhh
Confidence 56899999999999999999999999999999999999985211 1111111
Q ss_pred ---cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 709 ---AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 709 ---~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
..|+-=..+++.++-..+.+++|||+..|+.+-+.||+--
T Consensus 131 ~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 131 SRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp SSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred hhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 1223335667777777889999999999999999999764
No 121
>PRK09449 dUMP phosphatase; Provisional
Probab=96.62 E-value=0.0085 Score=60.63 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=77.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe---
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR--- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 708 (817)
++.|++.++++.|+ +|+++.++|......+....+..|+...- +..+.+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--------------------------d~v~~~~~~~ 147 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--------------------------DLLVISEQVG 147 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--------------------------CEEEEECccC
Confidence 36799999999999 68999999999888888888888874311 1222222
Q ss_pred ---cCcccHHHHHHHHhcC-CCEEEEEcCCc-cCHHHhhhCCce-EEeCCCccH-HHHhhcCEEeccCCccHHHHHH
Q 003468 709 ---AEPRHKQEIVRLLKED-GEVVAMTGDGV-NDAPALKLADIG-VAMGIAGTE-VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 709 ---~~p~~K~~iv~~l~~~-~~~v~~~GDg~-ND~~~l~~A~vg-iamg~~~~~-~ak~~ad~vl~~~~~~~i~~~i 778 (817)
..|+-=..+++.++.. .+.+++|||+. +|+.+-+.||+- |.+...+.. .....+|+++.+ +..+...+
T Consensus 148 ~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 148 VAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred CCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 2222224455666533 36799999998 799999999986 333311211 111246777644 66555544
No 122
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.61 E-value=0.0096 Score=56.96 Aligned_cols=112 Identities=12% Similarity=0.047 Sum_probs=73.3
Q ss_pred EEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCC-CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccC
Q 003468 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGD-NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQD 701 (817)
Q Consensus 623 ~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (817)
.....+-+-++.|++.++++.|+++|+++.++|+. ....+..+...+|+........ ....-
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~-----------------~~~~F 98 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVP-----------------MHSLF 98 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCccc-----------------HHHhc
Confidence 44444455568899999999999999999999977 8888888889898742110000 00000
Q ss_pred CceEEEecCcccH--HHHHHHHh------cCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 702 GGLLFSRAEPRHK--QEIVRLLK------EDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 702 ~~~v~~r~~p~~K--~~iv~~l~------~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
+..+.+...+..| ..+.+.+. -..+.+++|||...|+.+-+.|++-++.-
T Consensus 99 d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 99 DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 1122222211122 23445443 33578999999999999999999976543
No 123
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.60 E-value=0.0066 Score=59.13 Aligned_cols=89 Identities=19% Similarity=0.287 Sum_probs=65.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS---- 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---- 707 (817)
++.|++.++++.|++.|++++++|+..... ..+..++|+...- ...+++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--------------------------~~i~~~~~~~ 137 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--------------------------DVVIFSGDVG 137 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--------------------------CEEEEcCCCC
Confidence 578999999999999999999999988877 5555557874311 111211
Q ss_pred --ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 708 --RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 708 --r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
...|+--..+.+.++...+.+++|||...|+.+-+.+|+-
T Consensus 138 ~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 138 RGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred CCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 1223333556666666678999999999999999999884
No 124
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.54 E-value=0.0032 Score=61.50 Aligned_cols=95 Identities=13% Similarity=0.169 Sum_probs=64.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|+++|+++.++|+... +....+.+|+...-. ..+...+ .-..+..|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~----~~~~~~~----------------~~~~kp~p 144 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD----AIVDPAE----------------IKKGKPDP 144 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc----EEEehhh----------------cCCCCCCh
Confidence 5789999999999999999999997543 456677788743211 1111110 00112333
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
+-=....+.++-..+.+++|||+.+|+.+-+.||+-.
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 3334556666655678999999999999999999863
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.45 E-value=0.0038 Score=61.01 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=64.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+...-.. ++...+ .-..+..|
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~----v~~~~~----------------~~~~kp~~ 145 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA----IVDADE----------------VKEGKPHP 145 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE----eeehhh----------------CCCCCCCh
Confidence 57899999999999999999999987 556777788887431110 000000 00011222
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
+--..+.+.++...+.+++|||+.+|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 146 ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 2224455555555678999999999999999999863
No 126
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.43 E-value=0.014 Score=65.94 Aligned_cols=123 Identities=14% Similarity=0.123 Sum_probs=80.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-.. .+.+++ +.....|
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~----i~~~d~-----------------v~~~~kP 388 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE----TFSIEQ-----------------INSLNKS 388 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce----eEecCC-----------------CCCCCCc
Confidence 5789999999999999999999999999999999999998532111 111100 0011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCC-CccHHHHhhcCEEeccCCccHHHHHHH
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGI-AGTEVAKEASDMVLADDNFGTIVAAVG 779 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~-~~~~~ak~~ad~vl~~~~~~~i~~~i~ 779 (817)
+--...++.+ ..+.+++|||+.+|+.+-+.|++- |++.. .+.+.....+|+++.+ +..+...+.
T Consensus 389 ~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 454 (459)
T PRK06698 389 DLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILS 454 (459)
T ss_pred HHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHH
Confidence 3223333333 246799999999999999999985 44421 1222223457888754 666666553
No 127
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.39 E-value=0.012 Score=57.08 Aligned_cols=124 Identities=19% Similarity=0.111 Sum_probs=66.6
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHh----hH-----------HHHHHHhCCCCCCccccccccChhHHHHHHHHhHh
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKN----TA-----------EAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY 697 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~----~a-----------~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (817)
+.|++.+++++|+++|+++.++|.-+.. .+ ..+....|+.-. .+........+.. .
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~~~~~~~~~-------~ 97 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD--GIYYCPHHPEGVE-------E 97 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc--EEEECCCCCcccc-------c
Confidence 5789999999999999999999987641 11 122222232200 0000000000000 0
Q ss_pred hccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE--EeCCCcc---HHHHhhcCEEecc
Q 003468 698 LRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV--AMGIAGT---EVAKEASDMVLAD 768 (817)
Q Consensus 698 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi--amg~~~~---~~ak~~ad~vl~~ 768 (817)
+. ...-..+..|+-=....+.++-..+.++||||..+|+.+-+.|++.. .+. .|. ......||+++.+
T Consensus 98 ~~--~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 98 FR--QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS 170 (176)
T ss_pred cc--CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc
Confidence 00 00000112233334455556656788999999999999999999853 332 232 1222347888754
No 128
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.38 E-value=0.007 Score=61.21 Aligned_cols=95 Identities=17% Similarity=0.186 Sum_probs=67.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.+++++|++. ++++++|+-....+..+.+.+|+...-.. ++.. ...-..+..|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~----i~~~----------------~~~~~~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDD----IFVS----------------EDAGIQKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCE----EEEc----------------CccCCCCCCH
Confidence 4689999999999999 99999999999998888999988532110 0000 0000011223
Q ss_pred ccHHHHHHHH-hcCCCEEEEEcCCc-cCHHHhhhCCce
Q 003468 712 RHKQEIVRLL-KEDGEVVAMTGDGV-NDAPALKLADIG 747 (817)
Q Consensus 712 ~~K~~iv~~l-~~~~~~v~~~GDg~-ND~~~l~~A~vg 747 (817)
+-=...++.+ .-..+.+++|||+. +|+.+-+.+|+-
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 3335566666 65667899999998 899999999974
No 129
>PLN02940 riboflavin kinase
Probab=96.29 E-value=0.0095 Score=65.24 Aligned_cols=116 Identities=16% Similarity=0.148 Sum_probs=76.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHH-HhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR-EIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++++.|++.|+++.++|+.....+....+ ..|+...-. .++.+++ .-.....
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd----~ii~~d~----------------v~~~KP~ 152 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS----VIVGGDE----------------VEKGKPS 152 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC----EEEehhh----------------cCCCCCC
Confidence 367999999999999999999999998888776655 567632110 1111110 0011223
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE-EeCCCcc--HHHHhhcCEEecc
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV-AMGIAGT--EVAKEASDMVLAD 768 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi-amg~~~~--~~ak~~ad~vl~~ 768 (817)
|+-=..+++.++-..+.+++|||+.+|+.+-+.||+.. ++. .+. ......+|.++.+
T Consensus 153 p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 153 PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC
Confidence 33345566667666788999999999999999999873 343 222 2223456666543
No 130
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.21 E-value=0.023 Score=54.52 Aligned_cols=135 Identities=21% Similarity=0.260 Sum_probs=84.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCcc-----ccc------------------cccChhHH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHED-----ISS------------------QSITGKEF 688 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-----~~~------------------~~~~~~~~ 688 (817)
.+-|++.++++.+.+.= ..+++|-.-..-+..+|..+|+...+.. +.. ..++|+++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 35689999999998864 4455555555667889999998542211 111 11222221
Q ss_pred H-HHHHHhHhhccCCceEEEecCcc---------------cHHHHHHHHhcC---CCEEEEEcCCccCHHHhhhCC-ce-
Q 003468 689 M-DIHNQKNYLRQDGGLLFSRAEPR---------------HKQEIVRLLKED---GEVVAMTGDGVNDAPALKLAD-IG- 747 (817)
Q Consensus 689 ~-~~~~~~~~~~~~~~~v~~r~~p~---------------~K~~iv~~l~~~---~~~v~~~GDg~ND~~~l~~A~-vg- 747 (817)
. ++. .+|.|..|. .|.++++.+... ....+++||+..|..||+.+. -|
T Consensus 162 fe~lD-----------e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGg 230 (315)
T COG4030 162 FEKLD-----------ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGG 230 (315)
T ss_pred HHHHH-----------HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCc
Confidence 1 111 133444443 344555544332 234688999999999999873 33
Q ss_pred EEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 748 VAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 748 iamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
+|+.-||.+-+..-||+.+.+.+.......|
T Consensus 231 lAvaFNGNeYal~eAdVAvisp~~~a~~pvi 261 (315)
T COG4030 231 LAVAFNGNEYALKEADVAVISPTAMAEAPVI 261 (315)
T ss_pred eEEEecCCcccccccceEEeccchhhhhHHH
Confidence 5555578888888899999888877777665
No 131
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.21 E-value=0.011 Score=56.76 Aligned_cols=88 Identities=18% Similarity=0.195 Sum_probs=64.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCC-HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDN-KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.+-+++.++++.|++.|++++++|+.+ ...+..+.+.+|+.... . .....
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~--------------------------~---~~KP~ 93 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP--------------------------H---AVKPP 93 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc--------------------------C---CCCCC
Confidence 567999999999999999999999988 56677777777763100 0 01122
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCceE
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIGV 748 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgi 748 (817)
|+-=..+++.++...+.+++|||.. .|+.+-+.|++-.
T Consensus 94 p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 94 GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 3333445555655677899999998 7999999999853
No 132
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.19 E-value=0.011 Score=56.08 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=61.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCC---------------HhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHh
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDN---------------KNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY 697 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (817)
+-|++.+++++|+++|++++++|... ...+..+.+.+|+.- ...+.+.....+
T Consensus 30 ~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-d~ii~~~~~~~~----------- 97 (161)
T TIGR01261 30 FEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF-DDVLICPHFPDD----------- 97 (161)
T ss_pred ECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce-eEEEECCCCCCC-----------
Confidence 56899999999999999999999752 334555666666631 000000000000
Q ss_pred hccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 698 LRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 698 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
..-+....|+-=..+++.++...+.+++|||+.+|+.+-+.|++-..
T Consensus 98 -----~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 -----NCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00000111222234445555456789999999999999999999854
No 133
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.15 E-value=0.014 Score=58.06 Aligned_cols=95 Identities=16% Similarity=0.185 Sum_probs=63.1
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
.+-|++.++++.|++.|+++.++|+-... .....+.+|+...-.. ++.. ...-..+..|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~----i~~s----------------~~~~~~KP~~ 163 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDF----VVTS----------------YEVGAEKPDP 163 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcce----EEee----------------cccCCCCCCH
Confidence 56789999999999999999999986553 4666777777421110 0000 0000011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG 747 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg 747 (817)
+-=..+++.++...+.+++|||+. +|+.+-+.||+-
T Consensus 164 ~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 164 KIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 333455666666678899999997 899999998864
No 134
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.09 E-value=0.041 Score=66.20 Aligned_cols=37 Identities=8% Similarity=0.191 Sum_probs=32.1
Q ss_pred CCcHHHHHHHHHH-HHcCCeEEEECCCCHhhHHHHHHH
Q 003468 632 PPREEVRQAIEDC-KAAGIRVMVITGDNKNTAEAICRE 668 (817)
Q Consensus 632 ~~r~~~~~~I~~l-~~~gi~v~~~TGd~~~~a~~ia~~ 668 (817)
.+.+++.+++++| ++.|+.|+++||+...+.......
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5778999999997 778999999999999998876644
No 135
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.03 E-value=0.012 Score=55.04 Aligned_cols=101 Identities=20% Similarity=0.221 Sum_probs=62.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCH---------------hhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNK---------------NTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKN 696 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (817)
++.|++.++++.|++.|+++.++|.... ..+..+.+.+|+.... .+.......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~----------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-VLFCPHHPA----------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-EEECCCCCC-----------
Confidence 3689999999999999999999998763 3445566677764110 000000000
Q ss_pred hhccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 697 YLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 697 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
...-.....|+-=..+++.++...+.+++|||...|+.+-+.+++-..
T Consensus 95 -----~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 95 -----DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 000000122222244555566566789999999999999999998643
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.00 E-value=0.034 Score=57.04 Aligned_cols=87 Identities=14% Similarity=0.232 Sum_probs=60.5
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhh---HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEE
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNT---AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF 706 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 706 (817)
..++-|++.++++.+++.|++++++|++.... +....+..|+.... ...++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~--------------------------~d~ll 169 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD--------------------------EEHLL 169 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC--------------------------cceEE
Confidence 34577999999999999999999999987443 33556677875321 12233
Q ss_pred EecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhh
Q 003468 707 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALK 742 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~ 742 (817)
.|-....|..-.+.+.+....++++||..+|.....
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 443334465555566555677999999999986543
No 137
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.87 E-value=0.022 Score=51.76 Aligned_cols=93 Identities=13% Similarity=0.140 Sum_probs=60.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCC-CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGD-NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA- 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~- 709 (817)
++.+++.++++.|+++|+++.++|+. ....+..+.+..+.. . .+ .. +.... ...+.+..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~--~-~i----~~------l~~~f------~~~~~~~~~ 89 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDF--G-II----FP------LAEYF------DPLTIGYWL 89 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcccc--c-cc----hh------hHhhh------hhhhhcCCC
Confidence 78999999999999999999999999 777777776766610 0 00 00 00000 00011111
Q ss_pred -CcccHHHHHHHHh--cCCCEEEEEcCCccCHHHhhh
Q 003468 710 -EPRHKQEIVRLLK--EDGEVVAMTGDGVNDAPALKL 743 (817)
Q Consensus 710 -~p~~K~~iv~~l~--~~~~~v~~~GDg~ND~~~l~~ 743 (817)
.|+.=..+++.++ -..+.+++|||...|...++.
T Consensus 90 pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 2333345666666 667899999999999877654
No 138
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.79 E-value=0.019 Score=54.10 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=60.3
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
..+++.++++.|++.|+++.++|+.....+....+.. +...... ++. ... +..+..|+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~----i~~----------------~~~-~~~Kp~~~ 122 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDL----ILG----------------SDE-FGAKPEPE 122 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcE----EEe----------------cCC-CCCCcCHH
Confidence 3478999999999999999999999999888877765 3211000 000 000 11122333
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCC
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLAD 745 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~ 745 (817)
--..+.+.++... .++++||+.+|+.+-+.|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 3344555565555 8999999999999988775
No 139
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.73 E-value=0.014 Score=54.58 Aligned_cols=95 Identities=14% Similarity=0.078 Sum_probs=66.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
+++|++.+.++.|+ .++++.++|.-....+..+.+.+++... +...++..++. .+..|
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~---~f~~i~~~~d~------------------~~~KP 102 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY---FGYRRLFRDEC------------------VFVKG 102 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC---EeeeEEECccc------------------cccCC
Confidence 46999999999999 5799999999999999999999887421 10111111110 01122
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
. -...++.+....+.+++|||..+|+.+-+.|+|-|.
T Consensus 103 ~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 122345566667899999999999999888877664
No 140
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.71 E-value=0.03 Score=56.02 Aligned_cols=99 Identities=13% Similarity=0.117 Sum_probs=69.6
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC---CCCCCccccccccChhHHHHHHHHhHhhccCCceEE
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG---VFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLF 706 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 706 (817)
+-++.|++.+++++|+++|+++.++|..+......+.+..+ +...-..+ + ...+.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~-------------------f---d~~~g 150 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGY-------------------F---DTTVG 150 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceE-------------------E---EeCcc
Confidence 35689999999999999999999999998877776665542 21100000 0 01111
Q ss_pred EecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 707 SRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
....|+-=..+++.++-..+.++++||...|+.+-+.||+-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 22334444667777777778899999999999999999997543
No 141
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.63 E-value=0.075 Score=52.96 Aligned_cols=81 Identities=21% Similarity=0.224 Sum_probs=55.6
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhh---HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNT---AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
-|.-|++.++++.+++.|++|+++|||.... +..-.++.|+... ..++-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----------------------------~~LiL 170 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----------------------------KHLIL 170 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----------------------------Ceeee
Confidence 3678999999999999999999999999765 3344556776531 11222
Q ss_pred ecC-------cccHHHHHHHHhcCCC-EEEEEcCCccCHH
Q 003468 708 RAE-------PRHKQEIVRLLKEDGE-VVAMTGDGVNDAP 739 (817)
Q Consensus 708 r~~-------p~~K~~iv~~l~~~~~-~v~~~GDg~ND~~ 739 (817)
|.. .+-|...-+.+.+.|. +++.+||..+|..
T Consensus 171 R~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 171 RGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred cCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 321 1126566656665654 5677999999973
No 142
>PLN02811 hydrolase
Probab=95.47 E-value=0.035 Score=55.92 Aligned_cols=100 Identities=19% Similarity=0.206 Sum_probs=61.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHH-HHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEA-ICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
++.|++.++|+.|+++|+++.++||-....... ..+..++.... ...+..++. ..-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f----~~i~~~~~~--------------~~~~~KP~ 139 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM----HHVVTGDDP--------------EVKQGKPA 139 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC----CEEEECChh--------------hccCCCCC
Confidence 467999999999999999999999987654332 22222332110 000110000 00001123
Q ss_pred cccHHHHHHHHh---cCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 711 PRHKQEIVRLLK---EDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 711 p~~K~~iv~~l~---~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+--...++.+. -..+.+++|||+..|+.+-+.||+-..
T Consensus 140 p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 140 PDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred cHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 333355566664 446889999999999999999999743
No 143
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.29 E-value=0.046 Score=52.18 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=59.2
Q ss_pred cHHHHHHHHHHHHcCCeEEEECCCCHh------------hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccC
Q 003468 634 REEVRQAIEDCKAAGIRVMVITGDNKN------------TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQD 701 (817)
Q Consensus 634 r~~~~~~I~~l~~~gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (817)
-|++.++++.|+++|+++.++|..... .+..+.+.+|+.. . .+ ...
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~-~-~i---i~~----------------- 101 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI-Q-VL---AAT----------------- 101 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE-E-EE---Eec-----------------
Confidence 489999999999999999999975542 3456677777732 0 00 000
Q ss_pred CceEEEecCcccHHHHHHHHh--cCCCEEEEEcCCc--------cCHHHhhhCCceE
Q 003468 702 GGLLFSRAEPRHKQEIVRLLK--EDGEVVAMTGDGV--------NDAPALKLADIGV 748 (817)
Q Consensus 702 ~~~v~~r~~p~~K~~iv~~l~--~~~~~v~~~GDg~--------ND~~~l~~A~vgi 748 (817)
.........|+-=..+++.++ -..+.++||||.. +|+.+-+.||+-.
T Consensus 102 ~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 102 HAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000000112222244555555 4457899999986 6999999888755
No 144
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.24 E-value=0.06 Score=66.83 Aligned_cols=130 Identities=12% Similarity=0.151 Sum_probs=85.8
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+-|++.++++.|+++|+++.++|+.....+....+..|+.... +..++..++ .-.....|+
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~---Fd~iv~~~~----------------~~~~KP~Pe 222 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM---FDAIVSADA----------------FENLKPAPD 222 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH---CCEEEECcc----------------cccCCCCHH
Confidence 5689999999999999999999999999998888999884110 000111000 000122333
Q ss_pred cHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce-EEeCC--CccHHHHhhcCEEeccCCccHHHHHHHHh
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG-VAMGI--AGTEVAKEASDMVLADDNFGTIVAAVGEG 781 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg~--~~~~~ak~~ad~vl~~~~~~~i~~~i~~g 781 (817)
-=...++.++...+.+++|||..+|+.+-+.|++- |++.. ...+.....+|+++.+-..-.+..++..|
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 33556677777778899999999999999999985 44431 12233445778888764333455554433
No 145
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.10 E-value=0.098 Score=48.32 Aligned_cols=85 Identities=21% Similarity=0.351 Sum_probs=67.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
...|++++-+..++++|++++++|..+...+...++.+|+.. ++--..|
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f-------------------------------i~~A~KP 94 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF-------------------------------IYRAKKP 94 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce-------------------------------eecccCc
Confidence 478999999999999999999999999999999999999853 1111223
Q ss_pred ccH--HHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce
Q 003468 712 RHK--QEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG 747 (817)
Q Consensus 712 ~~K--~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg 747 (817)
-.+ .+.++.++...+.|+|+||.. .|+-+=+.||+=
T Consensus 95 ~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 95 FGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred cHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 332 456667777789999999995 698887777765
No 146
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.05 E-value=0.06 Score=57.66 Aligned_cols=99 Identities=16% Similarity=0.105 Sum_probs=59.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCC---------------CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGD---------------NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKN 696 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (817)
++.|++.++++.|+++|++++++|+- ....+..+.+..|+.- ...+.......
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~s----------- 97 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPE----------- 97 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCc-----------
Confidence 57899999999999999999999983 1223445556666531 00000000000
Q ss_pred hhccCCceEEEecCccc--HHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 697 YLRQDGGLLFSRAEPRH--KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 697 ~~~~~~~~v~~r~~p~~--K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
+. ..+ ..|.. =..+.+.+......++||||+.+|..+-+.|++-..
T Consensus 98 -----d~-~~~-rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 -----DN-CSC-RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -----cc-CCC-CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00 001 12221 122333344445889999999999999999999844
No 147
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.05 E-value=0.02 Score=57.36 Aligned_cols=104 Identities=20% Similarity=0.251 Sum_probs=64.6
Q ss_pred CCcHHHHHHHHHH--HHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec
Q 003468 632 PPREEVRQAIEDC--KAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l--~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 709 (817)
|+.|+.+++++.+ ++.|+.++++|.-+..-...+.+.-|+...-..++.... .++. ........+.. .-+.++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa---~~~~-~G~l~v~pyh~-h~C~~C 145 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPA---CFDA-DGRLRVRPYHS-HGCSLC 145 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCc---eecC-CceEEEeCccC-CCCCcC
Confidence 5688999999999 457999999999999999999999998542111111100 0000 00000000000 012233
Q ss_pred Ccc-cHHHHHHHHhcC----C---CEEEEEcCCccCHHH
Q 003468 710 EPR-HKQEIVRLLKED----G---EVVAMTGDGVNDAPA 740 (817)
Q Consensus 710 ~p~-~K~~iv~~l~~~----~---~~v~~~GDg~ND~~~ 740 (817)
.|. =|..+++.+... | +.|+++|||.||...
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp 184 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCP 184 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCc
Confidence 332 488888877654 3 789999999999553
No 148
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=95.03 E-value=0.074 Score=52.60 Aligned_cols=92 Identities=20% Similarity=0.185 Sum_probs=62.8
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH-hCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE-IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR-- 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-- 708 (817)
++.|++.++++.|+++|+++.++|.-+.......... .++... + +..+.+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----------------------f---d~v~~s~~~ 137 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----------------------A---DHIYLSQDL 137 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----------------------c---CEEEEeccc
Confidence 4689999999999999999999999876654432221 222110 0 1112221
Q ss_pred ----cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 709 ----AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 709 ----~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
..|+-=..+++.++...+.+++|||...|+.+-+.||+-..
T Consensus 138 ~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 138 GMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred CCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 22333355667777777889999999999999999999643
No 149
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=94.78 E-value=0.25 Score=51.02 Aligned_cols=48 Identities=17% Similarity=0.296 Sum_probs=37.9
Q ss_pred EEeccCCC----CcHHHHHHHHHHHHcCCeEEEECCCCHhh---HHHHHHHhCCC
Q 003468 625 GMVGLRDP----PREEVRQAIEDCKAAGIRVMVITGDNKNT---AEAICREIGVF 672 (817)
Q Consensus 625 G~~~~~d~----~r~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~ 672 (817)
|++.-.+. +-|++.++|++|+++|++++++||++..+ .....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555566 88899999999999999999999987776 44455567763
No 150
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.76 E-value=0.022 Score=54.66 Aligned_cols=120 Identities=22% Similarity=0.256 Sum_probs=70.3
Q ss_pred CCcHHHHHHHHHHHHcCC-eEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAGI-RVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
|+-|+..++|+.+++.|- .++|+|.-|......+.+..|+.. ++..+++.....+-........++... -|...
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d----~F~~IfTNPa~~da~G~L~v~pyH~~h-sC~~C 158 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD----LFSEIFTNPACVDASGRLLVRPYHTQH-SCNLC 158 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH----HHHHHhcCCcccCCCCcEEeecCCCCC-ccCcC
Confidence 678999999999999997 999999999999888888888731 000001000000000000000000001 12223
Q ss_pred ccc--HHHHHHHHhcC-------CCEEEEEcCCccC-HHHhhhCCceEEeCCCccH
Q 003468 711 PRH--KQEIVRLLKED-------GEVVAMTGDGVND-APALKLADIGVAMGIAGTE 756 (817)
Q Consensus 711 p~~--K~~iv~~l~~~-------~~~v~~~GDg~ND-~~~l~~A~vgiamg~~~~~ 756 (817)
|.. |..++..++.. .+.+.++|||.|| +|+++...--+||-..|=+
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 333 55555555432 2478999999999 5777777777777644443
No 151
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.75 E-value=0.041 Score=56.43 Aligned_cols=70 Identities=21% Similarity=0.284 Sum_probs=49.7
Q ss_pred eEEEecCcccHHHHHHHHhcC----CCEEEEEcCCccCHHHhhhC--------CceEEeCCCccHHHHhhcCEEeccCCc
Q 003468 704 LLFSRAEPRHKQEIVRLLKED----GEVVAMTGDGVNDAPALKLA--------DIGVAMGIAGTEVAKEASDMVLADDNF 771 (817)
Q Consensus 704 ~v~~r~~p~~K~~iv~~l~~~----~~~v~~~GDg~ND~~~l~~A--------~vgiamg~~~~~~ak~~ad~vl~~~~~ 771 (817)
.+-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ++||+|+ .+. .+..|++++.+ .
T Consensus 158 ~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~--~ 232 (244)
T TIGR00685 158 VVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTG--P 232 (244)
T ss_pred EEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCC--H
Confidence 344556667887766665433 45799999999999999999 5889895 232 35678998874 5
Q ss_pred cHHHHHH
Q 003468 772 GTIVAAV 778 (817)
Q Consensus 772 ~~i~~~i 778 (817)
..+...+
T Consensus 233 ~~v~~~L 239 (244)
T TIGR00685 233 QQVLEFL 239 (244)
T ss_pred HHHHHHH
Confidence 5555554
No 152
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.67 E-value=0.039 Score=55.14 Aligned_cols=91 Identities=19% Similarity=0.169 Sum_probs=60.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhh--HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNT--AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS-- 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 707 (817)
++.|++.++++.|+++|++++++|...... ........++...- +..+.+
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f--------------------------d~v~~s~~ 147 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF--------------------------DAVVESCL 147 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC--------------------------CEEEEeee
Confidence 578999999999999999999999875433 22222223332110 111111
Q ss_pred ----ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 708 ----RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 708 ----r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
+..|+--..+++.++...+.+++|||...|+.+-+.||+-.
T Consensus 148 ~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 148 EGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred cCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 22233334556666666788999999999999999999863
No 153
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=94.45 E-value=0.041 Score=55.49 Aligned_cols=97 Identities=12% Similarity=0.145 Sum_probs=66.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++.| ++++.++|+.....+...-+..|+...-.. .++++.+.. ..+..|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~---~v~~~~~~~----------------~~KP~p 145 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD---KLFSGYDIQ----------------RWKPDP 145 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc---eEeeHHhcC----------------CCCCCh
Confidence 3567899999988 489999999988888888788887532100 011111000 011234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEe
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAM 750 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 750 (817)
+-=....+.+....+.+++|||+.+|+.+-+.||+.+..
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 444556666766678899999999999999999988754
No 154
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.44 E-value=0.12 Score=55.33 Aligned_cols=93 Identities=11% Similarity=0.133 Sum_probs=70.2
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH----hCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE----IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 707 (817)
++.+++.++++.|+++|+.+.++|..+...+..+.+. +|+...- ..+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------DARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------eEEEE
Confidence 3578999999999999999999999999999998887 6663210 00111
Q ss_pred --ecCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 708 --RAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 708 --r~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
...|+.-..+++.+....+.++++||...|+.+.+.+...|.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 12233345566666666789999999999999999998887554
No 155
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.40 E-value=0.21 Score=47.25 Aligned_cols=89 Identities=19% Similarity=0.252 Sum_probs=68.2
Q ss_pred CCCCcHHHHHHHHHHHHcCCe--EEEECCC-------CHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhcc
Q 003468 630 RDPPREEVRQAIEDCKAAGIR--VMVITGD-------NKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQ 700 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~--v~~~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (817)
++.+.|+..+.+++|++.+.. ++++|.. +...|..+++.+|+.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp---------------------------- 108 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP---------------------------- 108 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----------------------------
Confidence 467889999999999999874 9999986 478899999999984
Q ss_pred CCceEEEecCcccHHHHHHHHhcC-----CCEEEEEcCCc-cCHHHhhhCC-ceE
Q 003468 701 DGGLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGV-NDAPALKLAD-IGV 748 (817)
Q Consensus 701 ~~~~v~~r~~p~~K~~iv~~l~~~-----~~~v~~~GDg~-ND~~~l~~A~-vgi 748 (817)
...+..-.|.-..++.++++.. .+.++++||-. .|+-|=...| .+|
T Consensus 109 --vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~ti 161 (168)
T PF09419_consen 109 --VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTI 161 (168)
T ss_pred --EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEE
Confidence 1122234676667788888654 77899999994 6888766665 444
No 156
>PRK10444 UMP phosphatase; Provisional
Probab=94.07 E-value=0.25 Score=50.60 Aligned_cols=47 Identities=13% Similarity=0.241 Sum_probs=41.1
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH---hCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE---IGV 671 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~---~gi 671 (817)
|++.-.+.+-|++.++++.|+++|++++++|++...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 66666778899999999999999999999999999888877776 466
No 157
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.88 E-value=0.092 Score=45.39 Aligned_cols=48 Identities=17% Similarity=0.351 Sum_probs=36.3
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHH---HHhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC---REIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 672 (817)
|++...+.+-|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 556667888999999999999999999999988766544444 567775
No 158
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.81 E-value=0.39 Score=49.30 Aligned_cols=49 Identities=8% Similarity=0.127 Sum_probs=40.2
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECC---CCHhhHHHHHHHhCCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITG---DNKNTAEAICREIGVFG 673 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TG---d~~~~a~~ia~~~gi~~ 673 (817)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44555566677999999999999999999996 77888888888888753
No 159
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.80 E-value=0.14 Score=52.40 Aligned_cols=48 Identities=15% Similarity=0.201 Sum_probs=38.8
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH--HHHHHhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE--AICREIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~--~ia~~~gi~ 672 (817)
|.+.-.+.+-|++.+++++|+++|+++.++|........ ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 556666788999999999999999999999986554443 566788885
No 160
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=93.30 E-value=0.32 Score=47.34 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=65.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.+++.+++++|+ .+++++|.-+...+....+.+|+...-.. ++..++.. .........|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~----i~~~~~~~------------~~~~~~KP~p 144 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDG----IFCFDTAN------------PDYLLPKPSP 144 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCe----EEEeeccc------------CccCCCCCCH
Confidence 36789999999997 47999999999999999999998431110 00000000 0000011223
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
+-=..+++.++...+.+++|||...|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 3335566777777788999999999999999998864
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=93.23 E-value=0.2 Score=53.32 Aligned_cols=48 Identities=15% Similarity=0.298 Sum_probs=40.1
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHH---HHhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC---REIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 672 (817)
|++.-.+.+-|++.++|+.|++.|++++++|++...+...++ +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 566666777899999999999999999999999977777766 557764
No 162
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=92.82 E-value=0.2 Score=48.91 Aligned_cols=90 Identities=13% Similarity=0.161 Sum_probs=62.9
Q ss_pred HHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccHHHH
Q 003468 638 RQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHKQEI 717 (817)
Q Consensus 638 ~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~i 717 (817)
.++++.|++. +++.++|+.....+....+..|+...-. .+++.++. -..+..|+-=...
T Consensus 93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd----~i~~~~~~----------------~~~KP~p~~~~~~ 151 (188)
T PRK10725 93 IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD----AVVAADDV----------------QHHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce----EEEehhhc----------------cCCCCChHHHHHH
Confidence 5889999875 8999999999999999999999853211 11111100 0012233334556
Q ss_pred HHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 718 VRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 718 v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
.+.++...+.+++|||..+|+.+-+.||+-+
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 6667666678999999999999999999864
No 163
>PLN02580 trehalose-phosphatase
Probab=92.31 E-value=0.22 Score=53.73 Aligned_cols=62 Identities=21% Similarity=0.254 Sum_probs=44.4
Q ss_pred ccHHHHHHHHhcC-C---C---EEEEEcCCccCHHHhhh-----CCceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKED-G---E---VVAMTGDGVNDAPALKL-----ADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~-~---~---~v~~~GDg~ND~~~l~~-----A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.+|...++.+.+. + . .++++||+.||.+||+. +++||+||+ +... -.|++.+.+ -+.+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn-~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS-VPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec-CCCC--ccceEEcCC--HHHHHHHH
Confidence 4888777766543 1 2 24899999999999996 699999994 4432 257888765 55666555
No 164
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=91.43 E-value=0.47 Score=47.74 Aligned_cols=99 Identities=21% Similarity=0.237 Sum_probs=78.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.++.|++.+++..|++.|+.+...|+.....+..+.+.+|+...- ...+++++.. -.+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f----~~~v~~~dv~----------------~~KP~ 144 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF----DVIVTADDVA----------------RGKPA 144 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc----chhccHHHHh----------------cCCCC
Confidence 367899999999999999999999999999999999999986432 1122222221 11355
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEE
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVA 749 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 749 (817)
|+-=....+.|.-....+++|.|+.+.+.+-++||+-+-
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 666677788887788999999999999999999998854
No 165
>PLN03017 trehalose-phosphatase
Probab=91.43 E-value=3.6 Score=44.25 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=36.0
Q ss_pred CeEEEEEeccCC--CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHH
Q 003468 620 RLVFVGMVGLRD--PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR 667 (817)
Q Consensus 620 ~l~~lG~~~~~d--~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~ 667 (817)
|.+++-++.-.| .+.+++.++|++|. .|++++++||+.......+..
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhc
Confidence 344444443333 47899999999999 789999999999999988743
No 166
>PHA02597 30.2 hypothetical protein; Provisional
Probab=90.81 E-value=0.7 Score=45.48 Aligned_cols=93 Identities=12% Similarity=0.104 Sum_probs=56.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC-
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE- 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~- 710 (817)
++.|++.++++.|++.+ +.+++|.-+........+.+++.......+ ...+.+...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f----------------------~~i~~~~~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAF----------------------SEVLMCGHDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcc----------------------cEEEEeccCc
Confidence 36889999999999975 566777655544444555666532100000 111222222
Q ss_pred --cccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC--CceEE
Q 003468 711 --PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA--DIGVA 749 (817)
Q Consensus 711 --p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A--~vgia 749 (817)
|+--..+++.++ .+.+++|||..+|+.+-++| |+-..
T Consensus 131 ~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 131 SKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred ccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 222223344444 35688999999999999999 99643
No 167
>PLN02423 phosphomannomutase
Probab=90.58 E-value=0.37 Score=49.32 Aligned_cols=40 Identities=25% Similarity=0.337 Sum_probs=35.5
Q ss_pred cccHHHHHHHHhcCCCEEEEEcC----CccCHHHhhh-CCceEEeC
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGD----GVNDAPALKL-ADIGVAMG 751 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GD----g~ND~~~l~~-A~vgiamg 751 (817)
-.+|..-++.|+ ..+.|++||| |.||.+||+. .=.|+++.
T Consensus 187 gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 187 GWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 357999999999 8899999999 8999999997 77788886
No 168
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=90.12 E-value=0.57 Score=47.28 Aligned_cols=82 Identities=21% Similarity=0.354 Sum_probs=54.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhh---HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNT---AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+.-|++.+.++.+++.|++|+++|||+... +..-.++.|+...+. .++-.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~---------------------------l~lr~ 167 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDH---------------------------LILRP 167 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSC---------------------------GEEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccch---------------------------hcccc
Confidence 456789999999999999999999997653 333456667643211 11111
Q ss_pred cC-------cccHHHHHHHHhcCC-CEEEEEcCCccCHHH
Q 003468 709 AE-------PRHKQEIVRLLKEDG-EVVAMTGDGVNDAPA 740 (817)
Q Consensus 709 ~~-------p~~K~~iv~~l~~~~-~~v~~~GDg~ND~~~ 740 (817)
.. .+.|...-+.+.+.| ++++.+||..+|..-
T Consensus 168 ~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 168 DKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 11 223667777777774 566789999999874
No 169
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=90.01 E-value=1.8 Score=40.44 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=66.1
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHH---HHHHh-----CCCCCCccccccccChhHHHHHHHHhHhhccCC
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEA---ICREI-----GVFGAHEDISSQSITGKEFMDIHNQKNYLRQDG 702 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (817)
|..++++.+..+.+++.|++++.+|+|..-.+.. ..... ++... . ..++.+.+.. .+ .
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G--p---v~~sP~~l~~------al---~ 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG--P---VLLSPDSLFS------AL---H 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC--C---EEECCcchhh------hh---h
Confidence 6899999999999999999999999998755543 33333 33211 0 0011000000 00 1
Q ss_pred ceEEEecCcccHHHHHHHHhcC-----CCEEEEEcCCccCHHHhhhCCce
Q 003468 703 GLLFSRAEPRHKQEIVRLLKED-----GEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 703 ~~v~~r~~p~~K~~iv~~l~~~-----~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
..+..+-..+.|...++.++.. ...++++|...+|+.+-++++|-
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 1122333446788888877653 45678899999999999988775
No 170
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=89.84 E-value=2 Score=41.22 Aligned_cols=51 Identities=14% Similarity=0.283 Sum_probs=42.3
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHH---HHhCCC
Q 003468 622 VFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC---REIGVF 672 (817)
Q Consensus 622 ~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 672 (817)
.+-|.+.++|..-|++.++++.|+.++.+|.++|.-...+-+.+. +.+|+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 356999999999999999999999999999999877666655554 456764
No 171
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=89.15 E-value=1.2 Score=41.41 Aligned_cols=83 Identities=22% Similarity=0.378 Sum_probs=58.4
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHh----hHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKN----TAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+++-+++.|..-++.|=.++++||+... ++..+|+...|.+. ..++|+-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m---------------------------~pv~f~G 167 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM---------------------------NPVIFAG 167 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC---------------------------cceeecc
Confidence 5667789999999999999999999874 34566666666543 2334443
Q ss_pred cCc----ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCc
Q 003468 709 AEP----RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADI 746 (817)
Q Consensus 709 ~~p----~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~v 746 (817)
..| ..|-.. ++.. ..-+.-||+.||+.+-+.|++
T Consensus 168 dk~k~~qy~Kt~~---i~~~-~~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 168 DKPKPGQYTKTQW---IQDK-NIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred CCCCcccccccHH---HHhc-CceEEecCCchhhhHHHhcCc
Confidence 333 235433 4443 345788999999999999986
No 172
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=88.88 E-value=1.5 Score=44.18 Aligned_cols=90 Identities=18% Similarity=0.256 Sum_probs=64.2
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE---
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS--- 707 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--- 707 (817)
=++-+++.++++.+++. .+++++|--....+....+++|+...- +..+.+
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~F--------------------------d~v~~s~~~ 150 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYF--------------------------DAVFISEDV 150 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhh--------------------------heEEEeccc
Confidence 35678899999999999 999999998888888889999974321 111111
Q ss_pred -ecCcccH--HHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCce
Q 003468 708 -RAEPRHK--QEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIG 747 (817)
Q Consensus 708 -r~~p~~K--~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vg 747 (817)
...|..+ ..+.+.++...+.+++|||+ .||+..-+.+|+-
T Consensus 151 g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 151 GVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred ccCCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 2234333 55666777667899999998 5785666777764
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=88.65 E-value=3.1 Score=42.47 Aligned_cols=43 Identities=14% Similarity=0.317 Sum_probs=32.3
Q ss_pred CCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHH---HHHhCCC
Q 003468 630 RDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAI---CREIGVF 672 (817)
Q Consensus 630 ~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~i---a~~~gi~ 672 (817)
+.|.-|++.+..+.+++.|++|+++|||....-... .++.|+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 356778999999999999999999999986432222 2345664
No 174
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=87.22 E-value=1.3 Score=45.11 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=58.3
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS---- 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---- 707 (817)
++-|++.++++.|++. +++.++|..+.. .+..|+...- +..+.+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f--------------------------d~i~~~~~~~ 160 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF--------------------------EFVLRAGPHG 160 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh--------------------------ceeEecccCC
Confidence 4668999999999975 899999986554 1455653210 111111
Q ss_pred ecCc--ccHHHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCceEEeC
Q 003468 708 RAEP--RHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGVAMG 751 (817)
Q Consensus 708 r~~p--~~K~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgiamg 751 (817)
+..| +-=...++.++...+.+++|||. ..|+.+-+.||+-....
T Consensus 161 ~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 161 RSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred cCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 1122 22234455666667889999999 59999999999876554
No 175
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=87.08 E-value=3.5 Score=39.51 Aligned_cols=97 Identities=25% Similarity=0.301 Sum_probs=60.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHh-hc----cCCceEEE
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNY-LR----QDGGLLFS 707 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~v~~ 707 (817)
+.+++.+++..++++|.+++|+|--+ |+. ...++..++....+.... +. .-+.+++|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~-------rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIG-------RGYFTEADFDKLHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Ccc-------ccCccHHHHHHHHHHHHHHHHHcCCccceEEEC
Confidence 46889999999999999999998532 221 123344444443221110 00 11344556
Q ss_pred ecCccc--------HHHHHHHHhcC---CCEEEEEcCCccCHHHhhhCCce
Q 003468 708 RAEPRH--------KQEIVRLLKED---GEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 708 r~~p~~--------K~~iv~~l~~~---~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
.-.|++ ...+.+.+++. .....+|||...|..+-..|++.
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 555553 23344444443 47889999999999999888887
No 176
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=86.54 E-value=5.1 Score=40.64 Aligned_cols=66 Identities=24% Similarity=0.292 Sum_probs=32.7
Q ss_pred ceEEEecCcccHHHHHHHHhcCC-------CEEEEEcCCccCHHHhhhC------CceEEeCCCccHHHHhhcCEEecc
Q 003468 703 GLLFSRAEPRHKQEIVRLLKEDG-------EVVAMTGDGVNDAPALKLA------DIGVAMGIAGTEVAKEASDMVLAD 768 (817)
Q Consensus 703 ~~v~~r~~p~~K~~iv~~l~~~~-------~~v~~~GDg~ND~~~l~~A------~vgiamg~~~~~~ak~~ad~vl~~ 768 (817)
..+-.|..-..|...++.+-+.. ..++++||...|-.|++.. +++|.++.........+|++-+.+
T Consensus 155 ~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 155 KVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp SEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 34445555556888888765543 3689999999999999873 678888833222334567776654
No 177
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=85.30 E-value=4.1 Score=46.08 Aligned_cols=97 Identities=18% Similarity=0.138 Sum_probs=61.8
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH-hCCCCCCccccccccChhHHHHHHHHhHhhcc-CCceEEEe--
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE-IGVFGAHEDISSQSITGKEFMDIHNQKNYLRQ-DGGLLFSR-- 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~r-- 708 (817)
+++++.+. +++.|. .+++|+-...-+..+|++ +|++.- . +.++ .. .+..+-.+
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSASp~~~Vepfa~~~LGid~V----I-----gTeL----------ev~~~G~~TG~i~ 167 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITASPRIMVEPFVKTFLGADKV----L-----GTEL----------EVSKSGRATGFMK 167 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEECCcHHHHHHHHHHcCCCCEE----E-----eccc----------EECcCCEEeeeec
Confidence 56665554 456775 499999999999999987 898621 0 0000 00 01111112
Q ss_pred ----cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCC
Q 003468 709 ----AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGI 752 (817)
Q Consensus 709 ----~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~ 752 (817)
+.-++|.+-++..........+.||+.||.|||+.|+-+++++.
T Consensus 168 g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 168 KPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 23456776665432211223799999999999999999999984
No 178
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=83.06 E-value=3.8 Score=42.87 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=36.4
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHH---HHHHhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEA---ICREIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~---ia~~~gi~ 672 (817)
|++.-.+.+-|++.++|++|+++|++++++|++...+... -.+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4445566777889999999999999999999987554444 33557764
No 179
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=81.99 E-value=1.7 Score=41.64 Aligned_cols=86 Identities=12% Similarity=0.134 Sum_probs=56.6
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
++.|++.++++ ++.++|.-+........+.+|+...- ..+++.++. -.....|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~v~~~~~~----------------~~~KP~p 142 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF----DRAFSVDTV----------------RAYKPDP 142 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH----hhhccHhhc----------------CCCCCCH
Confidence 46788888888 37889999888888888888874311 011111110 0112234
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 744 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A 744 (817)
+-=..+.+.++...+.+++|||+..|+.+-+++
T Consensus 143 ~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 143 VVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 333566777777778999999999999876543
No 180
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=81.98 E-value=2.5 Score=43.60 Aligned_cols=41 Identities=10% Similarity=0.181 Sum_probs=38.0
Q ss_pred Cc-HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC
Q 003468 633 PR-EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG 673 (817)
Q Consensus 633 ~r-~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 673 (817)
+| |++.+++++|+++|++++++|+.....+....+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 45 999999999999999999999999999999999999964
No 181
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=81.14 E-value=1.2 Score=42.31 Aligned_cols=94 Identities=14% Similarity=0.125 Sum_probs=61.5
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCc
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEP 711 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 711 (817)
..||++.+.++.|.+. ..+++.|-.....|..+.+.++..... + ...+.. ..+... .|
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~--f-~~~l~r----------------~~~~~~--~~ 99 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKV--I-SRRLYR----------------ESCVFT--NG 99 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCE--E-eEEEEc----------------cccEEe--CC
Confidence 4799999999999988 999999999999999999999874310 0 000000 001110 11
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceE
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGV 748 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 748 (817)
.. .+-++.+......|+++||...|..+-+.++|-|
T Consensus 100 ~~-~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 100 KY-VKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred CE-EeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 10 1113334455678999999999887766665554
No 182
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=80.45 E-value=2.4 Score=38.09 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=29.4
Q ss_pred CCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH
Q 003468 631 DPPREEVRQAIEDCKAAGIRVMVITGDNKNTAE 663 (817)
Q Consensus 631 d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 663 (817)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 678899999999999999999999999876543
No 183
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=78.39 E-value=3.1 Score=47.26 Aligned_cols=39 Identities=23% Similarity=0.440 Sum_probs=31.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCH------------hhHHHHHHHhCC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNK------------NTAEAICREIGV 671 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~------------~~a~~ia~~~gi 671 (817)
+-|++.++++.|+++|++++++|.-.. ..+..+.+.+|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999997655 235556666666
No 184
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=77.82 E-value=1.2e+02 Score=38.38 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=23.6
Q ss_pred CCcHHHH-HHHHHHHHcCCeEEEECCCCHhhHHHHHH-HhCC
Q 003468 632 PPREEVR-QAIEDCKAAGIRVMVITGDNKNTAEAICR-EIGV 671 (817)
Q Consensus 632 ~~r~~~~-~~I~~l~~~gi~v~~~TGd~~~~a~~ia~-~~gi 671 (817)
...|+-+ +.|+.|++.|.. +..|||...-+-++.+ .+|+
T Consensus 784 R~sP~qK~~iV~~lq~~g~~-V~m~GDG~ND~~ALK~AdVGI 824 (1054)
T TIGR01657 784 RMAPDQKETLVELLQKLDYT-VGMCGDGANDCGALKQADVGI 824 (1054)
T ss_pred ecCHHHHHHHHHHHHhCCCe-EEEEeCChHHHHHHHhcCcce
Confidence 3445553 457888888874 4668997766555433 2454
No 185
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=76.74 E-value=4.7 Score=41.74 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCC
Q 003468 634 REEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFG 673 (817)
Q Consensus 634 r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 673 (817)
.|++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 3999999999999999999999888888899999999964
No 186
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=76.45 E-value=68 Score=37.95 Aligned_cols=87 Identities=21% Similarity=0.351 Sum_probs=52.4
Q ss_pred cCHHHHHHHHHHHHHHHHhhhceeeeeeecccccccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHH-
Q 003468 559 LDQYSRDLILQSLQEMSSTALRCLGFAYKDDLREFETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEV- 637 (817)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~g~r~l~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~- 637 (817)
+.+..|+...+.++++.+.|.|+..+.-.+... + ..+.+ -+|+-.+--...|+-
T Consensus 438 l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~T------------A----------~aIA~---elGI~~v~A~~~PedK 492 (673)
T PRK14010 438 LKDVIKDGLVERFRELREMGIETVMCTGDNELT------------A----------ATIAK---EAGVDRFVAECKPEDK 492 (673)
T ss_pred eecCCcHHHHHHHHHHHHCCCeEEEECCCCHHH------------H----------HHHHH---HcCCceEEcCCCHHHH
Confidence 445567788899999999999987664221100 0 00001 122222223444444
Q ss_pred HHHHHHHHHcCCeEEEECCCCHhhHHHHHHH-hCC
Q 003468 638 RQAIEDCKAAGIRVMVITGDNKNTAEAICRE-IGV 671 (817)
Q Consensus 638 ~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi 671 (817)
.+.|+.+++.|. ++..|||...-|-++++. +|+
T Consensus 493 ~~iV~~lQ~~G~-~VaMtGDGvNDAPALa~ADVGI 526 (673)
T PRK14010 493 INVIREEQAKGH-IVAMTGDGTNDAPALAEANVGL 526 (673)
T ss_pred HHHHHHHHhCCC-EEEEECCChhhHHHHHhCCEEE
Confidence 677899998885 566789988887776654 444
No 187
>PLN02151 trehalose-phosphatase
Probab=76.43 E-value=40 Score=36.22 Aligned_cols=62 Identities=16% Similarity=0.255 Sum_probs=42.6
Q ss_pred ccHHHHHHHHhcC----C---CEEEEEcCCccCHHHhhhC-----CceEEeCCCccHHHHhhcCEEeccCCccHHHHHH
Q 003468 712 RHKQEIVRLLKED----G---EVVAMTGDGVNDAPALKLA-----DIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 712 ~~K~~iv~~l~~~----~---~~v~~~GDg~ND~~~l~~A-----~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.+|...++.+.+. + ..++++||-..|-.||+.. |+||.+|. +.. .-.|++.+.+ .+.+..++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~-~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSK-YAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEecc-CCC--CCcceEeCCC--HHHHHHHH
Confidence 4788877776543 1 2489999999999999853 77887772 221 2268888876 55665555
No 188
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=76.21 E-value=13 Score=36.86 Aligned_cols=86 Identities=14% Similarity=0.214 Sum_probs=56.5
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhh----HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEe
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNT----AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSR 708 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 708 (817)
+-|++.+.++...+.|..|..+|.|.... +..-.++.|+....+ ...++-+
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~-------------------------~~~llkk 177 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE-------------------------SHLLLKK 177 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc-------------------------cceEEee
Confidence 45899999999999999999999998766 445566777764321 1223322
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCccCHHHhhhC
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLA 744 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A 744 (817)
. -..|..--+.+.+..+.|+.|||..+|-......
T Consensus 178 ~-~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 178 D-KKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred C-CCcHHHHHHHHhhccceeeEecCchhhhcchhhh
Confidence 1 1223322333444567899999999997654443
No 189
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=74.67 E-value=8.4 Score=38.87 Aligned_cols=133 Identities=23% Similarity=0.298 Sum_probs=70.4
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEec--
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRA-- 709 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~-- 709 (817)
.+|+++.+.++.|++.+|++.++|+-=......+.++.|...++-.+.+..+.-++ +..+.+-.
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~--------------~g~l~gF~~~ 155 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDE--------------DGVLVGFKGP 155 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-T--------------TSBEEEE-SS
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECC--------------cceEeecCCC
Confidence 47999999999999999999999988888888777887876544333222111110 01111111
Q ss_pred --CcccHHH-HH---HHHh--cCCCEEEEEcCCccCHHHhhhC-Cce--EEeC--CCccH----HHHhhcCEEeccCCcc
Q 003468 710 --EPRHKQE-IV---RLLK--EDGEVVAMTGDGVNDAPALKLA-DIG--VAMG--IAGTE----VAKEASDMVLADDNFG 772 (817)
Q Consensus 710 --~p~~K~~-iv---~~l~--~~~~~v~~~GDg~ND~~~l~~A-~vg--iamg--~~~~~----~ak~~ad~vl~~~~~~ 772 (817)
.+-.|.. .+ .+.+ +....|+..||+.-|+.|-.-. +.. +..| |...+ .-+++=|+|+.+|.--
T Consensus 156 lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm 235 (246)
T PF05822_consen 156 LIHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTM 235 (246)
T ss_dssp ---TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-
T ss_pred ceEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCc
Confidence 1122321 11 1121 2246899999999999997555 222 2222 22223 3467889999988765
Q ss_pred HHHHHH
Q 003468 773 TIVAAV 778 (817)
Q Consensus 773 ~i~~~i 778 (817)
.++..|
T Consensus 236 ~v~~~i 241 (246)
T PF05822_consen 236 DVPNAI 241 (246)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 666554
No 190
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=74.30 E-value=11 Score=40.32 Aligned_cols=107 Identities=17% Similarity=0.228 Sum_probs=65.8
Q ss_pred cHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh-C-------CCCCCccccccccCh----------hHHHHHHHHh
Q 003468 634 REEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI-G-------VFGAHEDISSQSITG----------KEFMDIHNQK 695 (817)
Q Consensus 634 r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~-g-------i~~~~~~~~~~~~~~----------~~~~~~~~~~ 695 (817)
-|++.+++++|+++|+++.++|+-....+..+.+.+ | +.. .+..++++ ..+..+....
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~----yFD~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD----YFDVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh----hCcEEEeCCCCCcccCCCCceEEEeCCC
Confidence 679999999999999999999999999999999986 6 221 00111111 0000000000
Q ss_pred Hhhc------cCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhh-hCCce
Q 003468 696 NYLR------QDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALK-LADIG 747 (817)
Q Consensus 696 ~~~~------~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~-~A~vg 747 (817)
..+. .....||+.-+ -..+.+.++..++.|++|||.. .|+-.-+ .++.-
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn---~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~ 318 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGS---LKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWR 318 (343)
T ss_pred CcccCCccccccCCCeEeCCC---HHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcE
Confidence 0000 01222333222 2456677788899999999984 6888776 66654
No 191
>PTZ00445 p36-lilke protein; Provisional
Probab=73.38 E-value=36 Score=33.48 Aligned_cols=104 Identities=12% Similarity=0.142 Sum_probs=63.0
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEE----
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFS---- 707 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---- 707 (817)
.++|+.+..+++|+++||+++++|=-...+ +... -....++|.++.+..-........-..+||
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~---------~~~~---~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~ 142 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKEL---------IPSE---NRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPK 142 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhh---------cccc---CCcceechHHHHHHHHHhcCccceeeeeeeeCCc
Confidence 379999999999999999999999655444 1111 112345566554431110000000011121
Q ss_pred --------------ecCcccH----HHHHHHHhcCCCEEEEEcCCccCHHHhhhCCce
Q 003468 708 --------------RAEPRHK----QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIG 747 (817)
Q Consensus 708 --------------r~~p~~K----~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 747 (817)
...|+.| .++++..+-..+.++.|=|....+.+-++.|+=
T Consensus 143 ~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ 200 (219)
T PTZ00445 143 FWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYI 200 (219)
T ss_pred ccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCE
Confidence 2245554 345666666678999999999999988886654
No 192
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=67.26 E-value=9.6 Score=30.60 Aligned_cols=58 Identities=28% Similarity=0.357 Sum_probs=39.6
Q ss_pred cccHHHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCceE-Ee--CCCccHHH---HhhcCEEecc
Q 003468 711 PRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGV-AM--GIAGTEVA---KEASDMVLAD 768 (817)
Q Consensus 711 p~~K~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgi-am--g~~~~~~a---k~~ad~vl~~ 768 (817)
|.--....+.++.....++||||. ..|+.+-+.+++-- .+ |....+.. ...+|+|+.+
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 444455666676667889999999 99999999999863 33 32222232 2578888754
No 193
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=66.94 E-value=20 Score=36.87 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=38.7
Q ss_pred EEEEEeccCCCCcHHHHHHHHHHHHc-CCeEEEECCCCHhhHHHHHHHhCC
Q 003468 622 VFVGMVGLRDPPREEVRQAIEDCKAA-GIRVMVITGDNKNTAEAICREIGV 671 (817)
Q Consensus 622 ~~lG~~~~~d~~r~~~~~~I~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi 671 (817)
+-+..--....+-++..++++.|... ...++|+||++.........-.|+
T Consensus 30 ~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 30 TEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred cccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 33444455667899999999999998 457999999999998877664333
No 194
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=66.79 E-value=7.8 Score=39.88 Aligned_cols=46 Identities=20% Similarity=0.297 Sum_probs=39.2
Q ss_pred EEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHH
Q 003468 623 FVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICRE 668 (817)
Q Consensus 623 ~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~ 668 (817)
+=|++.--+.+=|++.++|+.|+++|++++++|.....+...++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 3488888899999999999999999999999998887777654444
No 195
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=66.76 E-value=1.2e+02 Score=37.56 Aligned_cols=200 Identities=18% Similarity=0.133 Sum_probs=102.1
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCC
Q 003468 24 FPAWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGE 103 (817)
Q Consensus 24 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 103 (817)
.++.+++.+++.+++.....+.+..++-.....+ ++..+.+-|...+.....+.+++..+......
T Consensus 40 ~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~-------------fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~- 105 (917)
T COG0474 40 SPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKK-------------FLRQFKDPFIILLLVAALLSAFVGDWVDAGVD- 105 (917)
T ss_pred CcccCCCHHHHHHHHhhcCCccccccccCcHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhcccccCcc-
Confidence 4566788888888888555555544333332332 33344444444444444455555444221111
Q ss_pred CCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhccc-----c-eEE----ecCCccceeeecCCccCCc
Q 003468 104 EGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE-----Q-ATV----TRDGKKIPSLSAKELVPGD 173 (817)
Q Consensus 104 ~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~-----~-~~V----~r~g~~~~~i~~~dLv~GD 173 (817)
.++.+.++++. .+..+...++..++-++++++...... + ..+ +.-|.. +.+...|.+|-|
T Consensus 106 --------~~~I~~~i~~n-~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDi-V~l~~gd~vPAD 175 (917)
T COG0474 106 --------AIVILLVVVIN-ALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDI-VLLEAGDVVPAD 175 (917)
T ss_pred --------eeeehHHHHHH-HHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcE-EEECCCCccccc
Confidence 22233333333 334478888888888888888653322 1 222 234665 789999999999
Q ss_pred EEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCcEEeeCeEEEEEeeeCCcc
Q 003468 174 IVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGTTVVNGTCTCLVTNTGMNT 253 (817)
Q Consensus 174 II~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T 253 (817)
...|+..+ .-+|=-.|.|++.-..=+-..++.|..|.... ..+..-....+.+|+-.---..+|.-+..|..+
T Consensus 176 ~rLl~~~~-l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d------~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia 248 (917)
T COG0474 176 LRLLESSD-LEVDESALTGESLPVEKQALPLTKSDAPLGLD------RDNMLFSGTTVVSGRAKGIVVATGFETEFGKIA 248 (917)
T ss_pred eEEEEecC-ceEEcccccCCCcchhccccccccccccccCC------ccceEEeCCEEEcceEEEEEEEEcCccHHHHHH
Confidence 99999877 44444444333221111111223344444311 111222235677777443334444445555433
Q ss_pred c
Q 003468 254 E 254 (817)
Q Consensus 254 ~ 254 (817)
.
T Consensus 249 ~ 249 (917)
T COG0474 249 R 249 (917)
T ss_pred H
Confidence 3
No 196
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=65.51 E-value=1.4e+02 Score=36.19 Aligned_cols=96 Identities=13% Similarity=0.132 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 003468 69 TSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQ 148 (817)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~ 148 (817)
..+++.|++-|.-.+.+..+++.++.-... ..+ .++++++..+-.++..+...++-+.+.++....
T Consensus 28 ~~~~~~~~~~~~~lL~~aa~~s~~~~~~~~-------------~~~-i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~ 93 (755)
T TIGR01647 28 LKFLGFFWNPLSWVMEAAAIIAIALENWVD-------------FVI-ILGLLLLNATIGFIEENKAGNAVEALKQSLAPK 93 (755)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhhcchhh-------------hhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 355666666665444444444444433221 111 222333333334456677777777777764311
Q ss_pred -----ccc-eEE----ecCCccceeeecCCccCCcEEEecC
Q 003468 149 -----SEQ-ATV----TRDGKKIPSLSAKELVPGDIVELKV 179 (817)
Q Consensus 149 -----~~~-~~V----~r~g~~~~~i~~~dLv~GDII~l~~ 179 (817)
..+ ..| +.-|.. ..+...|.+|-|.+.++.
T Consensus 94 ~~V~Rdg~~~~I~~~~Lv~GDi-V~l~~Gd~IPaDg~vi~g 133 (755)
T TIGR01647 94 ARVLRDGKWQEIPASELVPGDV-VRLKIGDIVPADCRLFEG 133 (755)
T ss_pred EEEEECCEEEEEEhhhCcCCCE-EEECCCCEEeceEEEEec
Confidence 112 222 234655 788999999999998863
No 197
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=65.01 E-value=75 Score=28.67 Aligned_cols=80 Identities=18% Similarity=0.138 Sum_probs=44.2
Q ss_pred EEEecCcccHHHHHHHHhcCCCEEEEEcCCcc--CHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhH
Q 003468 705 LFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVN--DAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGR 782 (817)
Q Consensus 705 v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~N--D~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR 782 (817)
++++..+.-...+++.+ ..-+.+...|-|.| |.++++.-||-|+=..... +...|+++ ..+--..-+.++
T Consensus 42 ii~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~--~~aVAE~a-----~~T~e~~~~~~~ 113 (133)
T PF00389_consen 42 IIVGSGTPLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNVPGYN--AEAVAEHA-----GYTDEARERMAE 113 (133)
T ss_dssp EEESTTSTBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTT--HHHHHHHH-----TGBHHHHHHHHH
T ss_pred EEEcCCCCcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEeCCcC--Ccchhccc-----hhHHHHHHHHHH
Confidence 44444442234556666 34467889999998 8999999999987542111 23334444 222222234455
Q ss_pred HHHHhHHHHH
Q 003468 783 SIYNNMKAFI 792 (817)
Q Consensus 783 ~~~~~i~~~i 792 (817)
...+|+..++
T Consensus 114 ~~~~ni~~~l 123 (133)
T PF00389_consen 114 IAAENIERFL 123 (133)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666654
No 198
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=62.92 E-value=31 Score=34.94 Aligned_cols=48 Identities=21% Similarity=0.297 Sum_probs=36.0
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEEC---CCCHhhHHHHHHH-hCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVIT---GDNKNTAEAICRE-IGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~T---Gd~~~~a~~ia~~-~gi~ 672 (817)
|++.-.+.+=+++.++|+.++++|++++++| |+..........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 5555566777899999999999999999998 6666555544444 6663
No 199
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=62.90 E-value=11 Score=38.29 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=54.9
Q ss_pred cHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCccc
Q 003468 634 REEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRH 713 (817)
Q Consensus 634 r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 713 (817)
-++..++++.+++.|++. ++|......+.......|. +.-+..+. ... .+........|+-
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~-------------g~~~~~i~----~~g-~~~~~~gKP~~~~ 200 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGA-------------GYYAELIK----QLG-GKVIYSGKPYPAI 200 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecc-------------cHHHHHHH----HhC-CcEecCCCCCHHH
Confidence 588999999999999997 7787665544322222221 10011000 000 0111122333433
Q ss_pred HHHHHHHHhcC-CCEEEEEcCC-ccCHHHhhhCCceE
Q 003468 714 KQEIVRLLKED-GEVVAMTGDG-VNDAPALKLADIGV 748 (817)
Q Consensus 714 K~~iv~~l~~~-~~~v~~~GDg-~ND~~~l~~A~vgi 748 (817)
-..+.+.++.. .+.++|+||. .+|+.+=+.|++-.
T Consensus 201 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 201 FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 34555566433 4579999999 59999999998864
No 200
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=58.64 E-value=13 Score=38.77 Aligned_cols=110 Identities=18% Similarity=0.154 Sum_probs=59.9
Q ss_pred CeEEEEEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhc
Q 003468 620 RLVFVGMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLR 699 (817)
Q Consensus 620 ~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (817)
+-.++|. - .+---+++.++++.|++.|+ ..++|......... . +.... -.+.-+..+.. ..
T Consensus 133 ~~Vvv~~-d-~~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~--~--~~~~~--------~~g~~~~~i~~----~~ 193 (279)
T TIGR01452 133 GAVVVGY-D-EHFSYAKLREACAHLREPGC-LFVATNRDPWHPLS--D--GSRTP--------GTGSLVAAIET----AS 193 (279)
T ss_pred CEEEEec-C-CCCCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCc--C--CCccc--------ChHHHHHHHHH----Hh
Confidence 4455554 1 11237789999999999897 67777655322110 0 11000 00111111110 00
Q ss_pred cCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCceE
Q 003468 700 QDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIGV 748 (817)
Q Consensus 700 ~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgi 748 (817)
...........|+-=..+++.++...+.++||||. ..|+.+-+.|++-.
T Consensus 194 g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 194 GRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred CCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcE
Confidence 00111122344444455666676667899999999 59999999999873
No 201
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=58.35 E-value=1.8e+02 Score=36.43 Aligned_cols=139 Identities=17% Similarity=0.052 Sum_probs=69.5
Q ss_pred cccCC--HHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCC
Q 003468 26 AWAKD--VEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGE 103 (817)
Q Consensus 26 ~~~~~--~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 103 (817)
.++++ .+|+.+++.....+-++.. .+.+....+++.|...+.-.+.+..++..++.+...... .
T Consensus 56 ~~GLs~~~~ev~~r~~~yG~N~l~~~-------------~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~-~ 121 (941)
T TIGR01517 56 NEGVRLSSSTLERREKVYGKNELPEK-------------PPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEG-K 121 (941)
T ss_pred ccCCCCCHHHHHHHHHHhCCCCCCCC-------------CCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccc-c
Confidence 45777 7777777765444444321 111223345666655554444444444444443210000 0
Q ss_pred CCCcchhhhh-hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-----cccce-EE----ecCCccceeeecCCccCC
Q 003468 104 EGGEMEITAF-VEPLVIFLILIVNAIVGIWQESNAEKALEALKEI-----QSEQA-TV----TRDGKKIPSLSAKELVPG 172 (817)
Q Consensus 104 ~~~~~~~~~~-~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~-----~~~~~-~V----~r~g~~~~~i~~~dLv~G 172 (817)
.++...|.+. +..+++++.++++.+.++.+++..++..+..... ...+. .+ +.-|.. ..+...|.+|.
T Consensus 122 ~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDi-V~l~~Gd~IPa 200 (941)
T TIGR01517 122 ADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDI-VSLSTGDVVPA 200 (941)
T ss_pred CccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCE-EEECCCCEecc
Confidence 0111222233 3344555556667766766666655543333221 11122 22 234665 78999999999
Q ss_pred cEEEecC
Q 003468 173 DIVELKV 179 (817)
Q Consensus 173 DII~l~~ 179 (817)
|.+.++.
T Consensus 201 D~~li~g 207 (941)
T TIGR01517 201 DGVFISG 207 (941)
T ss_pred cEEEEEc
Confidence 9999964
No 202
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=55.74 E-value=3.3e+02 Score=33.63 Aligned_cols=137 Identities=13% Similarity=0.066 Sum_probs=70.9
Q ss_pred ccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003468 27 WAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGG 106 (817)
Q Consensus 27 ~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 106 (817)
.+++.+|+.+++.....+=+...+ +.+....+++.|+.-|.-.+.+...+..++.-+..
T Consensus 32 ~GLs~~ev~~r~~~~G~N~l~~~~-------------~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~~~~-------- 90 (867)
T TIGR01524 32 TGLTNVEVTERLAEFGPNQTVEEK-------------KVPNLRLLIRAFNNPFIYILAMLMGVSYLTDDLEA-------- 90 (867)
T ss_pred CCCCHHHHHHHHHhcCCCcCCCCC-------------CCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhHHH--------
Confidence 478888888888755444443221 11223345555555444333333333333332221
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhccc-----------c-eEE----ecCCccceeeecCCcc
Q 003468 107 EMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSE-----------Q-ATV----TRDGKKIPSLSAKELV 170 (817)
Q Consensus 107 ~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~~-----------~-~~V----~r~g~~~~~i~~~dLv 170 (817)
..+..+++++..+++.+.+... .++-.+++++...... + ..| +.-|.. ..+...|.+
T Consensus 91 -----~~iI~~iv~~~~~i~~~~e~~a-~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDi-V~l~~Gd~V 163 (867)
T TIGR01524 91 -----TVIIALMVLASGLLGFIQESRA-ERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDL-IELAAGDII 163 (867)
T ss_pred -----HHHhhhHHHHHHHHHHHHHHHH-HHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCE-EEECCCCEE
Confidence 1222334444445555555444 4777777777533221 1 222 223665 789999999
Q ss_pred CCcEEEecCCCcccccEEEEee
Q 003468 171 PGDIVELKVGDKVPADMRLLRL 192 (817)
Q Consensus 171 ~GDII~l~~G~~iPaD~~ll~~ 192 (817)
|-|.+.++. .-+-+|=-.|.|
T Consensus 164 PaDg~li~g-~~l~VDES~LTG 184 (867)
T TIGR01524 164 PADARVISA-RDLFINQSALTG 184 (867)
T ss_pred cccEEEEec-CceEEEcccccC
Confidence 999998874 333445444543
No 203
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=55.35 E-value=4.7e+02 Score=32.48 Aligned_cols=27 Identities=4% Similarity=0.107 Sum_probs=22.3
Q ss_pred cCHHHHHHHHHHHHHHHHhhhceeeee
Q 003468 559 LDQYSRDLILQSLQEMSSTALRCLGFA 585 (817)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~g~r~l~~a 585 (817)
+.+..|+...+.++.+.+.|.||..+.
T Consensus 547 ~~Dp~R~~a~~aI~~l~~aGI~v~miT 573 (902)
T PRK10517 547 FLDPPKETTAPALKALKASGVTVKILT 573 (902)
T ss_pred hhCcchhhHHHHHHHHHHCCCEEEEEc
Confidence 455678888999999999999987665
No 204
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=55.15 E-value=7.2 Score=31.94 Aligned_cols=27 Identities=22% Similarity=0.423 Sum_probs=19.4
Q ss_pred eeecCCccCCcEEEe-cCCCcccccEEE
Q 003468 163 SLSAKELVPGDIVEL-KVGDKVPADMRL 189 (817)
Q Consensus 163 ~i~~~dLv~GDII~l-~~G~~iPaD~~l 189 (817)
.+.-.+|.+||.|.| ++||.||-=..+
T Consensus 44 ~i~~~~i~~Gd~V~V~raGdVIP~I~~v 71 (82)
T PF03120_consen 44 YIKELDIRIGDTVLVTRAGDVIPKIVGV 71 (82)
T ss_dssp HHHHTT-BBT-EEEEEEETTTEEEEEEE
T ss_pred HHHHcCCCCCCEEEEEECCCccceEeEe
Confidence 455678999999999 799999964433
No 205
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.30 E-value=58 Score=34.20 Aligned_cols=62 Identities=16% Similarity=0.189 Sum_probs=37.6
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCC-ccC---HHHhhhCCceEEeCCCcc---HHHHhhcCEEec
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDG-VND---APALKLADIGVAMGIAGT---EVAKEASDMVLA 767 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg-~ND---~~~l~~A~vgiamg~~~~---~~ak~~ad~vl~ 767 (817)
|.-+||..-.++++..+. .|+.++++|-| .== +.+|..++..+.+=++.+ ..+-..||+++.
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIs 208 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVA 208 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 445666666666666643 48999999997 322 335666777665542222 223456787766
No 206
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=53.96 E-value=3.4e+02 Score=34.13 Aligned_cols=150 Identities=11% Similarity=0.036 Sum_probs=73.7
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCC
Q 003468 26 AWAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEG 105 (817)
Q Consensus 26 ~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 105 (817)
..+++-+|+.+++.....+=|+... +.+....+++.++.-|.-.+.+..+++.++..+.. ..+...
T Consensus 34 ~~GLs~~e~~~rl~~~G~N~l~~~~-------------~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~-~~~~~~ 99 (997)
T TIGR01106 34 SKGLSAARAAEILARDGPNALTPPP-------------TTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQA-STEEEP 99 (997)
T ss_pred ccCCCHHHHHHHHHHhCCCCCCCCC-------------CCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh-ccCCCc
Confidence 3477778887777654444343211 11223345555555444443333333333333211 000000
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-----cccc-eEE----ecCCccceeeecCCccCCcEE
Q 003468 106 GEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEI-----QSEQ-ATV----TRDGKKIPSLSAKELVPGDIV 175 (817)
Q Consensus 106 ~~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~-----~~~~-~~V----~r~g~~~~~i~~~dLv~GDII 175 (817)
....+...+..++++++..+..+...++..++-+.+..+... ...+ ..+ +.-|.. ..+...|.+|.|.+
T Consensus 100 ~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDi-v~l~~Gd~IPaD~~ 178 (997)
T TIGR01106 100 QNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDL-VEVKGGDRIPADLR 178 (997)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCE-EEECCCCEEeeeEE
Confidence 011122233445555555555566677777777777776321 1111 122 234665 78999999999999
Q ss_pred EecCCCcccccEEEEe
Q 003468 176 ELKVGDKVPADMRLLR 191 (817)
Q Consensus 176 ~l~~G~~iPaD~~ll~ 191 (817)
.++... +-+|=-.|.
T Consensus 179 il~~~~-l~VdeS~LT 193 (997)
T TIGR01106 179 IISAQG-CKVDNSSLT 193 (997)
T ss_pred EEEccC-cEEEccccC
Confidence 998653 223444443
No 207
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=53.29 E-value=37 Score=34.20 Aligned_cols=106 Identities=13% Similarity=0.118 Sum_probs=61.8
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+-++..++++.||+.|..+.++|-=.... ..+-..+|+...-.. .+.+.+ .=.-...|.
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~fD~---vv~S~e-----------------~g~~KPDp~ 172 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYFDF---VVESCE-----------------VGLEKPDPR 172 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhhhh---hhhhhh-----------------hccCCCChH
Confidence 34455699999999997777777433322 255566666311000 000000 000112233
Q ss_pred cHHHHHHHHhcCCCEEEEEcCC-ccCHHHhhhCCce-EEeCCCccHHHHh
Q 003468 713 HKQEIVRLLKEDGEVVAMTGDG-VNDAPALKLADIG-VAMGIAGTEVAKE 760 (817)
Q Consensus 713 ~K~~iv~~l~~~~~~v~~~GDg-~ND~~~l~~A~vg-iamg~~~~~~ak~ 760 (817)
-=...++.++...+.++++||. .||...-+.+|.- +-+. ++....++
T Consensus 173 If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~-~~~~~~~~ 221 (237)
T KOG3085|consen 173 IFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD-NSITALKE 221 (237)
T ss_pred HHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc-cccchhhh
Confidence 3355677888888999999998 6999988888765 4455 34333333
No 208
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=52.94 E-value=52 Score=35.11 Aligned_cols=49 Identities=20% Similarity=0.238 Sum_probs=38.9
Q ss_pred EEEeccCCCCcHHHHHHHHHHHHc----CCeEEEECCCC---Hhh-HHHHHHHhCCC
Q 003468 624 VGMVGLRDPPREEVRQAIEDCKAA----GIRVMVITGDN---KNT-AEAICREIGVF 672 (817)
Q Consensus 624 lG~~~~~d~~r~~~~~~I~~l~~~----gi~v~~~TGd~---~~~-a~~ia~~~gi~ 672 (817)
=|++.-.+++-+++.++++.|+.. |+++.++|-.. ..+ +..+.+.+|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 377778889999999999999999 99999999665 333 44455777874
No 209
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=46.86 E-value=1.2e+02 Score=31.93 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=30.4
Q ss_pred cHHHHHHHHHHHHcCCeEEEECCCCHhhHH-HHHHHhCCC
Q 003468 634 REEVRQAIEDCKAAGIRVMVITGDNKNTAE-AICREIGVF 672 (817)
Q Consensus 634 r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~-~ia~~~gi~ 672 (817)
-+++...-+.|+..|.+++++|.+....+. ...+.++..
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 567888889999999999999988765554 556666664
No 210
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=45.89 E-value=66 Score=32.14 Aligned_cols=116 Identities=14% Similarity=0.091 Sum_probs=73.1
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhC-CCCCCccccccc-cChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIG-VFGAHEDISSQS-ITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~g-i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
+.||+.+.++.|+..|+.+.++|+.+..++..-.+..+ +...-.. .+ .++.++ -.....
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~---~v~~d~~~v----------------~~gKP~ 153 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSH---VVLGDDPEV----------------KNGKPD 153 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCC---CeecCCccc----------------cCCCCC
Confidence 45599999999999999999999997777654443333 3211000 00 011111 011244
Q ss_pred cccHHHHHHHHhcCC-CEEEEEcCCccCHHHhhhCCceEEeCCC--ccHHHHhhcCEEec
Q 003468 711 PRHKQEIVRLLKEDG-EVVAMTGDGVNDAPALKLADIGVAMGIA--GTEVAKEASDMVLA 767 (817)
Q Consensus 711 p~~K~~iv~~l~~~~-~~v~~~GDg~ND~~~l~~A~vgiamg~~--~~~~ak~~ad~vl~ 767 (817)
|+-=....+.+.... +.++++.|..+=+.|-+.|+.=+-|-.. -.......+++++.
T Consensus 154 Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~ 213 (222)
T KOG2914|consen 154 PDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILE 213 (222)
T ss_pred chHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecc
Confidence 555556667777777 8999999999999999999988665422 11223445555554
No 211
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=44.40 E-value=7.2e+02 Score=30.92 Aligned_cols=147 Identities=17% Similarity=0.220 Sum_probs=75.8
Q ss_pred ccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCccCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 003468 27 WAKDVEECEEKYGVNPKIGLSVGEVKKRREIYGYNELEKHEGTSIFQLILEQFNDTLVRILLVAAVVSFVLAWYDGEEGG 106 (817)
Q Consensus 27 ~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 106 (817)
.+++.+|+.+++.....+=|...+ +.+....+++.|.+-|.-.+....++..++..+.....+..
T Consensus 44 ~GLs~~ea~~rl~~~G~N~l~~~~-------------~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~-- 108 (903)
T PRK15122 44 QGLTEEDAAERLQRYGPNEVAHEK-------------PPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEE-- 108 (903)
T ss_pred CCCCHHHHHHHHHhcCCCCCCCCC-------------CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCcc--
Confidence 578888888888755444443211 11223345666666555444444444444433321111000
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcc----c--------ceEE----ecCCccceeeecCCcc
Q 003468 107 EMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQS----E--------QATV----TRDGKKIPSLSAKELV 170 (817)
Q Consensus 107 ~~~~~~~~~~~~il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~----~--------~~~V----~r~g~~~~~i~~~dLv 170 (817)
..|...+..++++++..+-.++..+...++.++++++..... + ...| +.-|.. ..+...|.+
T Consensus 109 -~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDi-V~l~~Gd~I 186 (903)
T PRK15122 109 -TDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDI-VHLSAGDMI 186 (903)
T ss_pred -ccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCE-EEECCCCEE
Confidence 011233334444444444455666677777777777743221 1 1222 234665 789999999
Q ss_pred CCcEEEecCCCcccccEEEEe
Q 003468 171 PGDIVELKVGDKVPADMRLLR 191 (817)
Q Consensus 171 ~GDII~l~~G~~iPaD~~ll~ 191 (817)
|-|.+.++..+ +-+|=-.|.
T Consensus 187 PaDg~li~g~~-l~VDES~LT 206 (903)
T PRK15122 187 PADVRLIESRD-LFISQAVLT 206 (903)
T ss_pred eeeEEEEEcCc-eEEEccccC
Confidence 99999887433 334544443
No 212
>PLN02423 phosphomannomutase
Probab=44.24 E-value=35 Score=34.80 Aligned_cols=31 Identities=13% Similarity=0.266 Sum_probs=26.9
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHH
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAE 663 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~ 663 (817)
++.+.+.++|++|++. ++++++||+......
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~ 54 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKIS 54 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHHH
Confidence 5889999999999987 999999999766553
No 213
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=43.30 E-value=7.2e+02 Score=30.86 Aligned_cols=70 Identities=21% Similarity=0.283 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhhcc-----cceEEe-----cCCccceeeecCCccCCcEEEecCCCcccccEE
Q 003468 119 IFLILIVNAIVGIWQESNAEKALEALKEIQS-----EQATVT-----RDGKKIPSLSAKELVPGDIVELKVGDKVPADMR 188 (817)
Q Consensus 119 il~~~i~~~~~~~~~e~~~~~~~~~l~~~~~-----~~~~V~-----r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ 188 (817)
+++.++++ ++..+...++-+.+.++..... .+...+ .-|.. ..+...|.+|-|.+.++..+ .-+|=-
T Consensus 90 i~~~~~i~-~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDi-v~l~~Gd~IPaDg~ii~g~~-l~VDES 166 (884)
T TIGR01522 90 ILIVVTVG-FVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDL-VCLSVGDRVPADLRIVEAVD-LSIDES 166 (884)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCE-EEecCCCEEeeeEEEEEcCc-eEEEcc
Confidence 33333444 4455566677777777743211 122222 23555 78899999999999997532 224444
Q ss_pred EEe
Q 003468 189 LLR 191 (817)
Q Consensus 189 ll~ 191 (817)
.|.
T Consensus 167 ~LT 169 (884)
T TIGR01522 167 NLT 169 (884)
T ss_pred ccc
Confidence 443
No 214
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=41.53 E-value=1.2e+02 Score=30.55 Aligned_cols=140 Identities=16% Similarity=0.165 Sum_probs=72.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcc
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPR 712 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 712 (817)
+|+++.+.+..|++.+|++.+.|..-......+-++..-..++..+.+..+.-.+-..+......+. ..|.+....
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Li----htfnkn~~v 214 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLI----HTFNKNSSV 214 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHH----HHHccchHH
Confidence 6899999999999999999999976666666555544332222222111111111111000000110 011111111
Q ss_pred cHHHH-HHHHh--cCCCEEEEEcCCccCHHHhhhC-Cce----EEeCCCccH----HHHhhcCEEeccCCccHHHHHH
Q 003468 713 HKQEI-VRLLK--EDGEVVAMTGDGVNDAPALKLA-DIG----VAMGIAGTE----VAKEASDMVLADDNFGTIVAAV 778 (817)
Q Consensus 713 ~K~~i-v~~l~--~~~~~v~~~GDg~ND~~~l~~A-~vg----iamg~~~~~----~ak~~ad~vl~~~~~~~i~~~i 778 (817)
.+. -+++. ..+..|...||+..|+.|-.-+ ++| |..++...+ --++.-|+|+..|....++.-+
T Consensus 215 --~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~~D~tldv~~s~ 290 (298)
T KOG3128|consen 215 --LQNESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLVHDETLDVANSI 290 (298)
T ss_pred --HHhhhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccchHHHHHHHHHhhcceEEecCcccchhHHH
Confidence 111 12222 2356899999999998874322 111 222322222 2456789999988766655543
No 215
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=41.38 E-value=38 Score=32.27 Aligned_cols=40 Identities=15% Similarity=0.290 Sum_probs=31.5
Q ss_pred CcHHHHHHHHHHHHcCCeEEEEC-CCCHhhHHHHHHHhCCC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVIT-GDNKNTAEAICREIGVF 672 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~T-Gd~~~~a~~ia~~~gi~ 672 (817)
+-|+++++++.|++.|+++.++| -+.+.-|+.+.+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 56899999999999999999999 57889999999999997
No 216
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=41.30 E-value=41 Score=29.76 Aligned_cols=40 Identities=23% Similarity=0.472 Sum_probs=30.4
Q ss_pred CcHHHHHHHHHHHHcCCe-EEEECCCCHhhHHHHHHHhCCC
Q 003468 633 PREEVRQAIEDCKAAGIR-VMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~-v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
+.+.+.+++++|.+.|++ +|+.+|.....+...|++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 567789999999999995 8999999999999999998873
No 217
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=41.25 E-value=3.1e+02 Score=27.27 Aligned_cols=170 Identities=16% Similarity=0.207 Sum_probs=76.5
Q ss_pred ccCCcEEEecCCCcccccEEEEeecCCe-EEEeecCCC-CCccccccccccCCCCCCCCCccc--eeeeCcEEeeCeEEE
Q 003468 169 LVPGDIVELKVGDKVPADMRLLRLTSST-VRVEQGSLT-GESEAVSKTVKTVPENSDIQGKKC--MVFAGTTVVNGTCTC 244 (817)
Q Consensus 169 Lv~GDII~l~~G~~iPaD~~ll~~~~g~-~~Vdes~LT-GEs~pv~K~~~~~~~~~~~~~~~~--~l~~Gt~v~~g~~~~ 244 (817)
+.-|....+...+.+|-|.++++ .|+ +-+|=-.|. |... +.-... +-.+.+. .+. ....|..+..|+...
T Consensus 39 ~r~~~~~~i~~~~L~~GDiI~l~--~g~~vPaD~~ll~~g~~~-vd~s~l--tGes~pv-~k~~~~~~~~~~i~~Gs~v~ 112 (230)
T PF00122_consen 39 IRDGRWQKIPSSELVPGDIIILK--AGDIVPADGILLESGSAY-VDESAL--TGESEPV-KKTPLPLNPGNIIFAGSIVV 112 (230)
T ss_dssp EETTEEEEEEGGGT-TTSEEEEE--TTEBESSEEEEEESSEEE-EECHHH--HSBSSEE-EESSSCCCTTTEE-TTEEEE
T ss_pred EeccccccchHhhccceeeeecc--cccccccCccceeccccc-cccccc--ccccccc-ccccccccccchhhcccccc
Confidence 34578999999999999999996 332 222222222 2111 100000 0000000 011 233788888886544
Q ss_pred EEeeeCCccchhhhHhHhhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCcccccchhhH
Q 003468 245 LVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLNQFGEVLTMIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKC 324 (817)
Q Consensus 245 ~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (817)
-=...|.-+..|.-...-.-........+....+++....+......+.++++++.+.. + + +...
T Consensus 113 ~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~-------~~~~ 177 (230)
T PF00122_consen 113 SGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFII---W-----F-------FNDS 177 (230)
T ss_dssp EEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHH---C-----H-------TGST
T ss_pred ccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhcc---c-----e-------eccc
Confidence 33334444444443221111111223333345677777766665555554444433211 0 0 0001
Q ss_pred HHHHHHHHHHHhhhccCchHHHHHHHHHhHHHHHh
Q 003468 325 TYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMA 359 (817)
Q Consensus 325 ~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~ 359 (817)
...+...+...+..+=...|.++++++..+.....
T Consensus 178 ~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~ 212 (230)
T PF00122_consen 178 GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAA 212 (230)
T ss_dssp TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHH
T ss_pred ccccccccccccceeeeecccceeehHHHHHHHHH
Confidence 12223445555556666677777777776665543
No 218
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=40.57 E-value=24 Score=22.27 Aligned_cols=15 Identities=40% Similarity=0.415 Sum_probs=12.8
Q ss_pred CCCCCHHHHHHHHhh
Q 003468 43 KIGLSVGEVKKRREI 57 (817)
Q Consensus 43 ~~GL~~~~~~~r~~~ 57 (817)
++|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999875
No 219
>PF15584 Imm44: Immunity protein 44
Probab=39.02 E-value=14 Score=30.55 Aligned_cols=19 Identities=26% Similarity=0.422 Sum_probs=15.7
Q ss_pred CCcEEEecCCCcccccEEE
Q 003468 171 PGDIVELKVGDKVPADMRL 189 (817)
Q Consensus 171 ~GDII~l~~G~~iPaD~~l 189 (817)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4456788999999999976
No 220
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.81 E-value=1.9e+02 Score=30.05 Aligned_cols=62 Identities=15% Similarity=0.157 Sum_probs=36.4
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCCcc----CHHHhhhCCceEEeCCCccH---HHHhhcCEEec
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN----DAPALKLADIGVAMGIAGTE---VAKEASDMVLA 767 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N----D~~~l~~A~vgiamg~~~~~---~ak~~ad~vl~ 767 (817)
|.-+||.--.++++.++. .|+.++.+|.+.. =+.||...+.-|.+-.+.+. ..-..||+++.
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVV 205 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 344666666666666643 4889999999853 23355555555444322332 23456888876
No 221
>COG5547 Small integral membrane protein [Function unknown]
Probab=38.52 E-value=1.7e+02 Score=21.98 Aligned_cols=20 Identities=5% Similarity=0.678 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 003468 116 PLVIFLILIVNAIVGIWQES 135 (817)
Q Consensus 116 ~~~il~~~i~~~~~~~~~e~ 135 (817)
.+.+++..++....+.|.++
T Consensus 32 tilviil~~lGv~iGl~~~r 51 (62)
T COG5547 32 TILVIILILLGVYIGLYKKR 51 (62)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34455555667777777664
No 222
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=38.48 E-value=5.4e+02 Score=31.46 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=31.5
Q ss_pred CcHHHHHHHHHHHHc-CCeEEEECCCCHhhHHHHHHHhC
Q 003468 633 PREEVRQAIEDCKAA-GIRVMVITGDNKNTAEAICREIG 670 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~-gi~v~~~TGd~~~~a~~ia~~~g 670 (817)
+.+++.++++.|.+. +..|+++||+...........++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 678899999999876 67899999999999887665433
No 223
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=36.46 E-value=16 Score=35.25 Aligned_cols=14 Identities=36% Similarity=0.397 Sum_probs=12.5
Q ss_pred EecCCCcccccCcc
Q 003468 380 ICSDKTGTLTTNQM 393 (817)
Q Consensus 380 I~~DKTGTLT~~~m 393 (817)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 68999999999873
No 224
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=35.26 E-value=52 Score=30.90 Aligned_cols=40 Identities=18% Similarity=0.139 Sum_probs=36.7
Q ss_pred CCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCC
Q 003468 632 PPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
.+||++.+.++.|.+. ++++++|.-....|..+.+.++..
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 4799999999999965 999999999999999999999875
No 225
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=35.05 E-value=51 Score=34.14 Aligned_cols=48 Identities=19% Similarity=0.371 Sum_probs=41.3
Q ss_pred EEeccCCCCcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHH---HhCCC
Q 003468 625 GMVGLRDPPREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR---EIGVF 672 (817)
Q Consensus 625 G~~~~~d~~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~---~~gi~ 672 (817)
|++...+.+-|++.++++.|++.|-++.++|..+..+-...++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 8888999999999999999999999999999988777766655 46654
No 226
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=34.90 E-value=28 Score=38.82 Aligned_cols=108 Identities=19% Similarity=0.247 Sum_probs=56.3
Q ss_pred cHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHh-CCCC----CCccccccccChhH---HHHHHHHhHhh-------
Q 003468 634 REEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREI-GVFG----AHEDISSQSITGKE---FMDIHNQKNYL------- 698 (817)
Q Consensus 634 r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~-gi~~----~~~~~~~~~~~~~~---~~~~~~~~~~~------- 698 (817)
.|+.+..+++|+++|.++.++|+-+..-+..+..-+ |-.. +..+++..++.+.. |..-......+
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 457899999999999999999999998888877765 2210 22233333332211 11100000000
Q ss_pred -------ccCCceEEEecCcccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhC
Q 003468 699 -------RQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLA 744 (817)
Q Consensus 699 -------~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A 744 (817)
...+..+|+.-+- ..+.+.++..|..|+.|||.. .|+--.+..
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~---~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~ 315 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNW---DQLHKLLGWRGKEVLYFGDHIYGDILKSKKR 315 (448)
T ss_dssp ECS---SS--TC-EEEE--H---HHHHHHCT--GGGEEEEESSTTTTHHHHHHH
T ss_pred ccccccccccCCCEeecCCH---HHHHHHHccCCCeEEEECCchhhhhhhhccc
Confidence 0012234433332 345566777799999999995 698765553
No 227
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=34.74 E-value=3e+02 Score=28.50 Aligned_cols=110 Identities=11% Similarity=0.042 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccH
Q 003468 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHK 714 (817)
Q Consensus 635 ~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 714 (817)
+...++++.+.+++.-.++-.|.+...|..++..+...+... ....+..........+...+..+....+++.+
T Consensus 116 ~~l~~~~~~i~~a~~I~i~G~G~s~~~A~~~~~~l~~~g~~~------~~~~d~~~~~~~~~~~~~~Dv~I~iS~sg~~~ 189 (278)
T PRK11557 116 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGINA------VAERDMHALLATVQALSPDDLLLAISYSGERR 189 (278)
T ss_pred HHHHHHHHHHhcCCeEEEEecChhHHHHHHHHHHHhhCCCeE------EEcCChHHHHHHHHhCCCCCEEEEEcCCCCCH
Confidence 456778888899987777778888888888888776543211 11111111222222333344445555555555
Q ss_pred --HHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 715 --QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 715 --~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
..+++..+++|-.|+++-|.. +.|+-+.||+-+...
T Consensus 190 ~~~~~~~~ak~~ga~iI~IT~~~-~s~la~~ad~~l~~~ 227 (278)
T PRK11557 190 ELNLAADEALRVGAKVLAITGFT-PNALQQRASHCLYTI 227 (278)
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC-CCchHHhCCEEEEeC
Confidence 467788888898899888874 557778899998654
No 228
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.52 E-value=2.3e+02 Score=29.53 Aligned_cols=44 Identities=23% Similarity=0.388 Sum_probs=30.4
Q ss_pred cCCCCcHHHHHHHHHHHHcCCe---EEEECCCCHhhHH------HHHHHhCCC
Q 003468 629 LRDPPREEVRQAIEDCKAAGIR---VMVITGDNKNTAE------AICREIGVF 672 (817)
Q Consensus 629 ~~d~~r~~~~~~I~~l~~~gi~---v~~~TGd~~~~a~------~ia~~~gi~ 672 (817)
+..+++++.++-++.+++.|++ .++..||++.+.. ..|+++|+.
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 62 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 3455678888888888887775 3555688776643 356777874
No 229
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=34.23 E-value=9.9e+02 Score=29.79 Aligned_cols=29 Identities=7% Similarity=0.165 Sum_probs=23.4
Q ss_pred cCHHHHHHHHHHHHHHHHhhhceeeeeee
Q 003468 559 LDQYSRDLILQSLQEMSSTALRCLGFAYK 587 (817)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~g~r~l~~a~k 587 (817)
+.+..|+...+.++.+.+.|.++..+.-.
T Consensus 534 ~~Dplr~~v~e~I~~l~~aGI~v~miTGD 562 (917)
T TIGR01116 534 MLDPPRPEVADAIEKCRTAGIRVIMITGD 562 (917)
T ss_pred eeCCCchhHHHHHHHHHHCCCEEEEecCC
Confidence 45566788899999999999999877643
No 230
>PLN02645 phosphoglycolate phosphatase
Probab=34.18 E-value=67 Score=34.11 Aligned_cols=67 Identities=10% Similarity=0.108 Sum_probs=41.1
Q ss_pred cCcccHHHHHHHHhcCCCEEEEEcCCc-cCHHHhhhCCce---EEeCCCccHHHH-----hhcCEEeccCCccHHHHH
Q 003468 709 AEPRHKQEIVRLLKEDGEVVAMTGDGV-NDAPALKLADIG---VAMGIAGTEVAK-----EASDMVLADDNFGTIVAA 777 (817)
Q Consensus 709 ~~p~~K~~iv~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg---iamg~~~~~~ak-----~~ad~vl~~~~~~~i~~~ 777 (817)
..|.--..+++.++...+.++||||.. +|+.+-+.|++- |.-|....+... ..+|+++.+ +..+...
T Consensus 231 P~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~--~~~l~~~ 306 (311)
T PLN02645 231 PSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSK--ISDFLTL 306 (311)
T ss_pred ChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECC--HHHHHHH
Confidence 334433455666666678999999997 999999999965 322321112222 246777743 5555443
No 231
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=34.17 E-value=1e+02 Score=25.28 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=37.7
Q ss_pred EeccCCCCcHHHHHHHHHHHHcCCeEEE-ECCCCHhhHHHHHHHhCCC
Q 003468 626 MVGLRDPPREEVRQAIEDCKAAGIRVMV-ITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 626 ~~~~~d~~r~~~~~~I~~l~~~gi~v~~-~TGd~~~~a~~ia~~~gi~ 672 (817)
++.+.+...+.+.+..+.|++.|+++.+ ..+.+.......|...|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445667888999999999999999988 5667777777888888874
No 232
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=33.55 E-value=3.1e+02 Score=28.53 Aligned_cols=155 Identities=12% Similarity=0.198 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHhhhceeeeeeeccccc--ccccCCCCCcchhhccCCCCccccccCCeEEEEEeccCCCCcHHHHHHHH
Q 003468 565 DLILQSLQEMSSTALRCLGFAYKDDLRE--FETYDGDEDHPAHQLLLNPTNYSSIESRLVFVGMVGLRDPPREEVRQAIE 642 (817)
Q Consensus 565 ~~~~~~~~~~~~~g~r~l~~a~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~~r~~~~~~I~ 642 (817)
.+....+.+++++||.++.+..+.-++- ...+...... ........+.+.. ..-+|++.=.-...++..+.++
T Consensus 100 ~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~----vv~~~~d~~~l~~-~~~v~vvsQTT~~~~~~~~i~~ 174 (280)
T TIGR00216 100 TKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAI----VVETLEDLENFKV-EDLLGVVSQTTLSQEDTKEIVA 174 (280)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEE----EECCHHHHHhCCC-CCcEEEEEcCCCcHHHHHHHHH
Confidence 4577888999999999999997654331 1111100000 0000000111111 1237777777778888889999
Q ss_pred HHHHcC--C------eEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccH
Q 003468 643 DCKAAG--I------RVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHK 714 (817)
Q Consensus 643 ~l~~~g--i------~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 714 (817)
.|++.. . .++-.|-+....++.+|+++.+. .+|..+-++ .-
T Consensus 175 ~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m------------------------------iVVGg~nSs-NT 223 (280)
T TIGR00216 175 ELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM------------------------------IVIGGKNSS-NT 223 (280)
T ss_pred HHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE------------------------------EEECCCCCc-hH
Confidence 888865 2 35667777888888888876552 112222232 33
Q ss_pred HHHHHHHhcCCCEEEEEcCCcc-CHHHhhhC-CceEEeCCCccH
Q 003468 715 QEIVRLLKEDGEVVAMTGDGVN-DAPALKLA-DIGVAMGIAGTE 756 (817)
Q Consensus 715 ~~iv~~l~~~~~~v~~~GDg~N-D~~~l~~A-~vgiamg~~~~~ 756 (817)
.++.+..+..+..+..+.+... |..+|+.+ .|||.-| ++++
T Consensus 224 ~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAG-ASTP 266 (280)
T TIGR00216 224 TRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAG-ASTP 266 (280)
T ss_pred HHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEec-CCCC
Confidence 4566666666777888776632 66777755 4698888 4443
No 233
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=33.37 E-value=1.2e+02 Score=31.19 Aligned_cols=103 Identities=15% Similarity=0.267 Sum_probs=60.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHH---HhCCCCCCccccccccChhHHHHH----HHHhHhhccCCceE
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICR---EIGVFGAHEDISSQSITGKEFMDI----HNQKNYLRQDGGLL 705 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~---~~gi~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v 705 (817)
+.+++++.|+.+++.|+.+.-+|.+.+......++ ++|+.-.... ...+.+... ..........++++
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~-----~~~~~~~~~~~~~~~~~~~~~~~~GIl 156 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSS-----FPEDGIISFPVFDSALSRAPSFYDGIL 156 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccc-----cccCcceecccccCCCCCCceeecCeE
Confidence 56789999999999999999999998766554444 4666432211 000000000 00001111124555
Q ss_pred EEecCcccHHHHHH----HHhcCCCEEEEEcCCccCHHHhh
Q 003468 706 FSRAEPRHKQEIVR----LLKEDGEVVAMTGDGVNDAPALK 742 (817)
Q Consensus 706 ~~r~~p~~K~~iv~----~l~~~~~~v~~~GDg~ND~~~l~ 742 (817)
|+.- .+|..++. .+....+.++++-|....+..+.
T Consensus 157 ft~~--~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~ 195 (252)
T PF11019_consen 157 FTGG--QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVE 195 (252)
T ss_pred EeCC--CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 5543 45554444 34555788999999988776443
No 234
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=32.77 E-value=4.1e+02 Score=24.71 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=12.4
Q ss_pred eeeecCCccCCcEEEec
Q 003468 162 PSLSAKELVPGDIVELK 178 (817)
Q Consensus 162 ~~i~~~dLv~GDII~l~ 178 (817)
.-+.+..+.-|-||++.
T Consensus 99 v~VNst~l~dG~iVki~ 115 (149)
T PF11694_consen 99 VYVNSTALTDGMIVKIG 115 (149)
T ss_pred EEEecccccCCeEEEEC
Confidence 45777777777777776
No 235
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.00 E-value=3.3e+02 Score=28.32 Aligned_cols=63 Identities=17% Similarity=0.249 Sum_probs=39.6
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCCcc----CHHHhhhCCceEEeCCCccH-H--HHhhcCEEecc
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN----DAPALKLADIGVAMGIAGTE-V--AKEASDMVLAD 768 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N----D~~~l~~A~vgiamg~~~~~-~--ak~~ad~vl~~ 768 (817)
|.-+||.--.++++.++. .|+.++.+|.+.. =+.||...+.-|.+-.+.+. . .-..||+++.-
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 445677777777777653 5899999999854 23466656555554433332 2 23568888763
No 236
>PRK08433 flagellar motor switch protein; Validated
Probab=30.43 E-value=31 Score=30.19 Aligned_cols=42 Identities=7% Similarity=0.215 Sum_probs=19.4
Q ss_pred HHHHHHHhhcccceEEecCCccceeeecCCccCCcEEEecCCCccccc
Q 003468 139 KALEALKEIQSEQATVTRDGKKIPSLSAKELVPGDIVELKVGDKVPAD 186 (817)
Q Consensus 139 ~~~~~l~~~~~~~~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD 186 (817)
+.+.++..+..-.+.|. ..+...++-+.|++.+++||+||-|
T Consensus 21 ~~~~~~~~L~~v~VeV~------v~LG~t~itl~dlL~Lq~GDVI~Ld 62 (111)
T PRK08433 21 ELICDYENLLDIEVDFS------AELGTTQISLLEILKFEKGSVIDLE 62 (111)
T ss_pred HhhhhHHHhccceeEEE------EEEecccccHHHHhCCCCCCEEEeC
Confidence 45555555544444433 2233334444455555555555444
No 237
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=30.39 E-value=2.8e+02 Score=26.49 Aligned_cols=108 Identities=19% Similarity=0.216 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHcCCeEEEECCCCHhh-HHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCccc
Q 003468 635 EEVRQAIEDCKAAGIRVMVITGDNKNT-AEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRH 713 (817)
Q Consensus 635 ~~~~~~I~~l~~~gi~v~~~TGd~~~~-a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 713 (817)
.|..+++..+++.+-++.+++=.+... ...+.+-+|+. ...+.-.++++
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~------------------------------i~~~~~~~~~e 113 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD------------------------------IKIYPYDSEEE 113 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E------------------------------EEEEEESSHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc------------------------------eEEEEECCHHH
Confidence 456677777777777888887665554 67777777772 33455567888
Q ss_pred HHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeCCCccHHHHhhcCEEeccCCccHHHHHHHHhHHHHHhHHH
Q 003468 714 KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGIAGTEVAKEASDMVLADDNFGTIVAAVGEGRSIYNNMKA 790 (817)
Q Consensus 714 K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg~~~~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 790 (817)
-...++.++..| .-+.+|++.- +.+-+..|+. .++.....+++..++.+++.+.+..++
T Consensus 114 ~~~~i~~~~~~G-~~viVGg~~~-~~~A~~~gl~----------------~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 114 IEAAIKQAKAEG-VDVIVGGGVV-CRLARKLGLP----------------GVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHHTT---EEEESHHH-HHHHHHTTSE----------------EEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CcEEECCHHH-HHHHHHcCCc----------------EEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888 4566777642 3333443333 344455577889999999988877654
No 238
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.15 E-value=2.9e+02 Score=28.89 Aligned_cols=62 Identities=15% Similarity=0.161 Sum_probs=36.9
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCCcc----CHHHhhh------CCceEEeCCCccH--HHHhhcCEEecc
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN----DAPALKL------ADIGVAMGIAGTE--VAKEASDMVLAD 768 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N----D~~~l~~------A~vgiamg~~~~~--~ak~~ad~vl~~ 768 (817)
|.-+||..-.++++.++. .|+.++.+|-+.. =+.||.. |.|-++.. ...+ ..-..||+++.-
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVA 211 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 445677766667776653 3889999998853 1334543 55555554 2222 234678887653
No 239
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=30.09 E-value=72 Score=25.16 Aligned_cols=31 Identities=26% Similarity=0.292 Sum_probs=21.9
Q ss_pred cceEEecCCccceeeecC---CccCCcEEEecCCC
Q 003468 150 EQATVTRDGKKIPSLSAK---ELVPGDIVELKVGD 181 (817)
Q Consensus 150 ~~~~V~r~g~~~~~i~~~---dLv~GDII~l~~G~ 181 (817)
..+.|-.+|.. ++|+.. ++.|||-|.+..|.
T Consensus 17 ~~A~v~~~G~~-~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 17 GMAVVDFGGVR-REVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TEEEEEETTEE-EEEEGTTCTSB-TT-EEEEETTE
T ss_pred CEEEEEcCCcE-EEEEEEEeCCCCCCCEEEEecCh
Confidence 45677777876 777643 68899999999984
No 240
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=28.89 E-value=1.1e+02 Score=26.98 Aligned_cols=37 Identities=35% Similarity=0.507 Sum_probs=29.0
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCC
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGV 671 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi 671 (817)
-.+++.++++.+++.|++++.+|++.. ....+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 567899999999999999999998774 3345555553
No 241
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=28.32 E-value=4.7e+02 Score=26.98 Aligned_cols=40 Identities=18% Similarity=0.385 Sum_probs=24.4
Q ss_pred ccHHHHHHHHhcCCCEEEEEcCCccCHH---HhhhCCc-eEEeC
Q 003468 712 RHKQEIVRLLKEDGEVVAMTGDGVNDAP---ALKLADI-GVAMG 751 (817)
Q Consensus 712 ~~K~~iv~~l~~~~~~v~~~GDg~ND~~---~l~~A~v-giamg 751 (817)
++-..+++.+++.-..-+++|=|.|+.. .+..++. ||.+|
T Consensus 188 ~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 188 KKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCCEEEEC
Confidence 3445667777765555677899999554 4333322 56566
No 242
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=28.15 E-value=7.6e+02 Score=28.14 Aligned_cols=151 Identities=21% Similarity=0.201 Sum_probs=76.2
Q ss_pred cCCccceeeecCCccCCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCCccccccccccCCCCCCCCCccceeeeCc
Q 003468 156 RDGKKIPSLSAKELVPGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKTVKTVPENSDIQGKKCMVFAGT 235 (817)
Q Consensus 156 r~g~~~~~i~~~dLv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~~~~~~~~~~~~~~~~~l~~Gt 235 (817)
+-|.. ..+...|.+|-|.+.++- ..-+|--.|.|++...... .|+.. ..+ .+++.|+
T Consensus 53 ~~GDi-v~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~----~g~~v----~~g------------s~~~~G~ 109 (499)
T TIGR01494 53 VPGDI-VLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKT----AGDAV----FAG------------TYVFNGT 109 (499)
T ss_pred CCCCE-EEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeec----cCCcc----ccC------------cEEeccE
Confidence 34665 789999999999999976 3334544444333222221 14322 111 3578888
Q ss_pred EEeeCe---------EEEEEeeeCCccchhhhHhHhhhhccCCCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003468 236 TVVNGT---------CTCLVTNTGMNTEIGKVHSQIHEASQNEEDTPLKKKLN-QFGEVLTMIIGVICALVWLINVKYFL 305 (817)
Q Consensus 236 ~v~~g~---------~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~i~~~~~~ 305 (817)
..+.-. ..+.++++|.+|+. .+ .+...++. .+...+++++.++.++.|++......
T Consensus 110 ~~~~v~~~~~~s~~~~i~~~v~~~~~~k~-~~-------------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~ 175 (499)
T TIGR01494 110 LIVVVSATGPNTFGGKIAVVVYTGFETKT-PL-------------QPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPN 175 (499)
T ss_pred EEEEEEEeccccHHHHHHHHHHhcCCCCC-ch-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 765422 23344566665521 11 11112222 44444444444444444444322100
Q ss_pred cccccCCCCcccccchhhHHHHHHHHHHHHhhhccCchHHHHHHHHHhHHH
Q 003468 306 TWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTR 356 (817)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~L~~~~~~~~~~~~~ 356 (817)
.| ...+...+...+...-.++|.++|++...+.....+
T Consensus 176 ~~-------------~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~ 213 (499)
T TIGR01494 176 SI-------------FKIFLRALILLVIAIPIALPLAVTIALAVGDARLAK 213 (499)
T ss_pred cH-------------HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 00 011233455566666777888888888877665543
No 243
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=27.93 E-value=54 Score=27.92 Aligned_cols=30 Identities=30% Similarity=0.591 Sum_probs=23.6
Q ss_pred eEEecCCccceeeecCCccCCcEEEecCCCcc
Q 003468 152 ATVTRDGKKIPSLSAKELVPGDIVELKVGDKV 183 (817)
Q Consensus 152 ~~V~r~g~~~~~i~~~dLv~GDII~l~~G~~i 183 (817)
=+|.-||+. --|+.++++||+|.|.-|...
T Consensus 34 GrV~vNG~~--aKpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 34 GRVKVNGQR--AKPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CeEEECCEE--cccccccCCCCEEEEEeCCcE
Confidence 456667765 368999999999999988754
No 244
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=27.81 E-value=4e+02 Score=32.37 Aligned_cols=40 Identities=25% Similarity=0.449 Sum_probs=28.5
Q ss_pred CccCCcEEEecCC---CcccccEEEEeecCCeEEEeecCCCCCccccccc
Q 003468 168 ELVPGDIVELKVG---DKVPADMRLLRLTSSTVRVEQGSLTGESEAVSKT 214 (817)
Q Consensus 168 dLv~GDII~l~~G---~~iPaD~~ll~~~~g~~~Vdes~LTGEs~pv~K~ 214 (817)
+|.|+..+.++.| ..||+|.+=. +.-+.| ..||..|+.-.
T Consensus 374 sl~p~~a~ii~~g~~e~eI~v~lvq~---gdivkV----~pG~kiPvDG~ 416 (951)
T KOG0207|consen 374 SLAPSKATIIEDGSEEKEIPVDLVQV---GDIVKV----KPGEKIPVDGV 416 (951)
T ss_pred hcCcccceEeecCCcceEeeeeeecc---CCEEEE----CCCCccccccE
Confidence 6788888899888 5788876433 334444 78999887654
No 245
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=27.70 E-value=3.1e+02 Score=28.82 Aligned_cols=156 Identities=13% Similarity=0.151 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHhhhceeeeeeeccccc--ccccCCCCCcchhhccCCCCcccccc-CCeEEEEEeccCCCCcHHHHHHH
Q 003468 565 DLILQSLQEMSSTALRCLGFAYKDDLRE--FETYDGDEDHPAHQLLLNPTNYSSIE-SRLVFVGMVGLRDPPREEVRQAI 641 (817)
Q Consensus 565 ~~~~~~~~~~~~~g~r~l~~a~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e-~~l~~lG~~~~~d~~r~~~~~~I 641 (817)
.++.+.++++.++||.++.++.+.-++- ...+...... ........+.+. .+..-++++.=.-...++..+.+
T Consensus 100 ~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~----vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~ 175 (298)
T PRK01045 100 TKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVY----LVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEII 175 (298)
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEE----EEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHH
Confidence 3577888999999999999987653321 1111100000 000000111111 12234677776667778888888
Q ss_pred HHHHHcCCeE--------EEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCccc
Q 003468 642 EDCKAAGIRV--------MVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRH 713 (817)
Q Consensus 642 ~~l~~~gi~v--------~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 713 (817)
+.|++..-.+ +..|-+....++.+|+++... .+|..+-++ .
T Consensus 176 ~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~m------------------------------iVVGg~~Ss-N 224 (298)
T PRK01045 176 AALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLV------------------------------IVVGSKNSS-N 224 (298)
T ss_pred HHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEE------------------------------EEECCCCCc-c
Confidence 8888764332 345666667777777765542 112222222 3
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcc-CHHHhh-hCCceEEeCCCccH
Q 003468 714 KQEIVRLLKEDGEVVAMTGDGVN-DAPALK-LADIGVAMGIAGTE 756 (817)
Q Consensus 714 K~~iv~~l~~~~~~v~~~GDg~N-D~~~l~-~A~vgiamg~~~~~ 756 (817)
-.++.+..+..+..+..+.+-.. |...|+ ...|||.-| ++++
T Consensus 225 T~kL~~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaG-ASTP 268 (298)
T PRK01045 225 SNRLREVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAG-ASAP 268 (298)
T ss_pred HHHHHHHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEec-CCCC
Confidence 34566666666667777776532 555665 447999888 4443
No 246
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=27.01 E-value=41 Score=25.05 Aligned_cols=13 Identities=46% Similarity=0.705 Sum_probs=10.5
Q ss_pred cCCcEEEecCCCc
Q 003468 170 VPGDIVELKVGDK 182 (817)
Q Consensus 170 v~GDII~l~~G~~ 182 (817)
.+||+|.|+.|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 5899999988764
No 247
>PRK11479 hypothetical protein; Provisional
Probab=26.93 E-value=27 Score=35.89 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=18.0
Q ss_pred eeeecCCccCCcEEEecCCCcc
Q 003468 162 PSLSAKELVPGDIVELKVGDKV 183 (817)
Q Consensus 162 ~~i~~~dLv~GDII~l~~G~~i 183 (817)
..|+.++|+|||||..+.+..+
T Consensus 58 ~~Vs~~~LqpGDLVFfst~t~~ 79 (274)
T PRK11479 58 KEITAPDLKPGDLLFSSSLGVT 79 (274)
T ss_pred cccChhhCCCCCEEEEecCCcc
Confidence 3688999999999999876533
No 248
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=26.89 E-value=4.2e+02 Score=24.35 Aligned_cols=17 Identities=24% Similarity=0.360 Sum_probs=13.0
Q ss_pred CCC-CHHHHHHHHhhcCC
Q 003468 44 IGL-SVGEVKKRREIYGY 60 (817)
Q Consensus 44 ~GL-~~~~~~~r~~~~G~ 60 (817)
+|+ +++++++-++.|++
T Consensus 7 ~GlI~~~q~~~i~~~~~~ 24 (145)
T PF09925_consen 7 QGLITPEQAEAILAFYGE 24 (145)
T ss_pred CCCCCHHHHHHHHHHhhc
Confidence 455 78888888888883
No 249
>PRK04980 hypothetical protein; Provisional
Probab=26.76 E-value=1.1e+02 Score=26.25 Aligned_cols=37 Identities=19% Similarity=0.437 Sum_probs=28.7
Q ss_pred cceEEecCCccceeeecCCccCCcEEEec--CCCcccccEEEEee
Q 003468 150 EQATVTRDGKKIPSLSAKELVPGDIVELK--VGDKVPADMRLLRL 192 (817)
Q Consensus 150 ~~~~V~r~g~~~~~i~~~dLv~GDII~l~--~G~~iPaD~~ll~~ 192 (817)
.+..-+|++.+ +..+|||++.|. .+.+.-|+..+++.
T Consensus 19 kKTiTiRd~se------~~~~~G~~~~V~~~e~g~~~c~ieI~sV 57 (102)
T PRK04980 19 RKTITIRDESE------SHFKPGDVLRVGTFEDDRYFCTIEVLSV 57 (102)
T ss_pred CceEEeeCCcc------cCCCCCCEEEEEECCCCcEEEEEEEEEE
Confidence 34455666543 579999999997 88899999999853
No 250
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=26.74 E-value=1.8e+02 Score=25.84 Aligned_cols=54 Identities=19% Similarity=0.199 Sum_probs=40.6
Q ss_pred CCeEEEEEeccCCCCcHHHHHHHHHHHHcCC-e-EEEECCCCHhhHHHHHHHhCCC
Q 003468 619 SRLVFVGMVGLRDPPREEVRQAIEDCKAAGI-R-VMVITGDNKNTAEAICREIGVF 672 (817)
Q Consensus 619 ~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi-~-v~~~TGd~~~~a~~ia~~~gi~ 672 (817)
.+-.++++-+......+.+++.++.|++.|. + .+++-|..+..-.+-+++.|+.
T Consensus 49 ~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 49 EDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred cCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCC
Confidence 3445788888888899999999999999977 3 4566666665555667788974
No 251
>PRK10671 copA copper exporting ATPase; Provisional
Probab=26.33 E-value=7.9e+02 Score=30.23 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=20.7
Q ss_pred CCcEEEecCCCcccccEEEEeecCCeEEEeecCCCCC
Q 003468 171 PGDIVELKVGDKVPADMRLLRLTSSTVRVEQGSLTGE 207 (817)
Q Consensus 171 ~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LTGE 207 (817)
-|....+...+..|-|.+++.. +..+-+|=-.+.|+
T Consensus 330 ~~~~~~v~~~~l~~GD~v~v~~-G~~iP~Dg~v~~g~ 365 (834)
T PRK10671 330 DEGEKSVPLADVQPGMLLRLTT-GDRVPVDGEITQGE 365 (834)
T ss_pred CCcEEEEEHHHcCCCCEEEEcC-CCEeeeeEEEEEce
Confidence 3555667777777777777751 22344454444453
No 252
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.18 E-value=4.1e+02 Score=27.96 Aligned_cols=62 Identities=18% Similarity=0.249 Sum_probs=33.7
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCCcc----CHHHhhhCCceEEeCCCcc-H--HHHhhcCEEec
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN----DAPALKLADIGVAMGIAGT-E--VAKEASDMVLA 767 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N----D~~~l~~A~vgiamg~~~~-~--~ak~~ad~vl~ 767 (817)
|.-+||.--.++++.++. .|+.++.+|-+.- =+.||...+.-|.+-.+.+ + ..-..||+++.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIs 207 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVA 207 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 334666666666666543 4888899998843 1334544444433322222 1 23356787765
No 253
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=25.27 E-value=1.7e+02 Score=24.33 Aligned_cols=48 Identities=15% Similarity=0.179 Sum_probs=37.6
Q ss_pred EEeccCC---CCcHHHHHHHHHHHHcCCeEEEE-CCCCHhhHHHHHHHhCCC
Q 003468 625 GMVGLRD---PPREEVRQAIEDCKAAGIRVMVI-TGDNKNTAEAICREIGVF 672 (817)
Q Consensus 625 G~~~~~d---~~r~~~~~~I~~l~~~gi~v~~~-TGd~~~~a~~ia~~~gi~ 672 (817)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4556666 67788899999999999998888 555666667788888874
No 254
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=24.65 E-value=4.9e+02 Score=22.93 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC--ccc
Q 003468 636 EVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE--PRH 713 (817)
Q Consensus 636 ~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~--p~~ 713 (817)
+..++++.+.+++.-.++-+|.....|...+..+...... .....+.+. ...........+..++...+ +.+
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~i~iS~~g~~~~ 75 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKP----VVLLSDPHL--QLMSAANLTPGDVVIAISFSGETKE 75 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCCc----eEEecCHHH--HHHHHHcCCCCCEEEEEeCCCCCHH
Confidence 3567888888887767777888888888877776543221 111111111 11111112222233333222 233
Q ss_pred HHHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 714 KQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 714 K~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
-.++++..+++|-.++.+.+.. +.++-+.+|+-+-..
T Consensus 76 ~~~~~~~a~~~g~~iv~iT~~~-~~~l~~~~d~~i~~~ 112 (139)
T cd05013 76 TVEAAEIAKERGAKVIAITDSA-NSPLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHHHHcCCeEEEEcCCC-CChhHHhcCEEEEcC
Confidence 4567777888877776655542 345556778777654
No 255
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.42 E-value=3.9e+02 Score=27.91 Aligned_cols=61 Identities=23% Similarity=0.326 Sum_probs=34.7
Q ss_pred EecCcccHHHHHHHHhc--CCCEEEEEcCCcc----CHHHhhh--CCceEEeCCCccH---HHHhhcCEEec
Q 003468 707 SRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN----DAPALKL--ADIGVAMGIAGTE---VAKEASDMVLA 767 (817)
Q Consensus 707 ~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N----D~~~l~~--A~vgiamg~~~~~---~ak~~ad~vl~ 767 (817)
.-+||.--.++++.++. .|+.++.+|-+.. =+.||.. .+..|.+-.+.+. ..-..||+++.
T Consensus 138 ~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~ 209 (284)
T PRK14193 138 LPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVA 209 (284)
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEE
Confidence 34566666666666653 3889999999854 1234543 3443333322232 23456888876
No 256
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=24.09 E-value=6.3e+02 Score=29.05 Aligned_cols=38 Identities=21% Similarity=0.465 Sum_probs=23.1
Q ss_pred hhhhHHHHHH----HHHHHHHHHHHHHhHHHHHHHHHHhhcc
Q 003468 112 AFVEPLVIFL----ILIVNAIVGIWQESNAEKALEALKEIQS 149 (817)
Q Consensus 112 ~~~~~~~il~----~~i~~~~~~~~~e~~~~~~~~~l~~~~~ 149 (817)
+|..++++++ +-++..+++.....++++.+..+.++..
T Consensus 139 ~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~~~~~~ls~ 180 (559)
T COG4988 139 NWAAALILLITAPLIPLFMILVGLAAKDASEKQFSALARLSG 180 (559)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4555444442 3345566777777777888887776543
No 257
>PF11431 Transport_MerF: Membrane transport protein MerF; InterPro: IPR021091 This entry represents Mercury ion transport protein MerF, which has a core helix-loop-helix domain. It also has two vicinal pairs of cysteine residues which are involved in the transport of Hg(II) across the membrane and are exposed to the cytoplasm []. ; PDB: 1WAZ_A 2LJ2_A 2H3O_A.
Probab=23.84 E-value=2.8e+02 Score=19.89 Aligned_cols=20 Identities=25% Similarity=0.388 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 003468 82 TLVRILLVAAVVSFVLAWYD 101 (817)
Q Consensus 82 ~~~~~ll~~~~~~~~~~~~~ 101 (817)
|...+++.+..++...+|.+
T Consensus 2 PiLviL~g~vGLsa~vgyLD 21 (46)
T PF11431_consen 2 PILVILFGAVGLSALVGYLD 21 (46)
T ss_dssp HHHHHHHHHHHHHHHHSHTT
T ss_pred ceehHHHHHhHHHHHHHHHH
Confidence 45566677777777777654
No 258
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=23.80 E-value=41 Score=26.22 Aligned_cols=23 Identities=39% Similarity=0.683 Sum_probs=11.3
Q ss_pred EecCCccceeeecCCccCCcEEEe
Q 003468 154 VTRDGKKIPSLSAKELVPGDIVEL 177 (817)
Q Consensus 154 V~r~g~~~~~i~~~dLv~GDII~l 177 (817)
|..||+. ..-....|.+||+|.+
T Consensus 35 V~VNGe~-e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 35 VKVNGEV-ETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HEETTB-----SS----SSEEEEE
T ss_pred eEECCEE-ccccCCcCCCCCEEEE
Confidence 4456665 5556677999999999
No 259
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.72 E-value=5e+02 Score=27.14 Aligned_cols=62 Identities=18% Similarity=0.187 Sum_probs=35.7
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCCcc----CHHHhhh--CCceEEeCCCccHH--HHhhcCEEecc
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN----DAPALKL--ADIGVAMGIAGTEV--AKEASDMVLAD 768 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N----D~~~l~~--A~vgiamg~~~~~~--ak~~ad~vl~~ 768 (817)
|.-+||.--.++++.++. .|+.|+.+|.|.. =+.||.. |.|-++.. ...+. .-..||+++.-
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVG 207 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEe
Confidence 344667666667776654 4899999999932 2334544 44444433 22222 34678887653
No 260
>PRK11507 ribosome-associated protein; Provisional
Probab=23.62 E-value=71 Score=25.31 Aligned_cols=26 Identities=23% Similarity=0.293 Sum_probs=19.5
Q ss_pred EEecCCccceeeecCCccCCcEEEecC
Q 003468 153 TVTRDGKKIPSLSAKELVPGDIVELKV 179 (817)
Q Consensus 153 ~V~r~g~~~~~i~~~dLv~GDII~l~~ 179 (817)
.|..||+. ..-.-..|.|||+|.+..
T Consensus 38 ~V~VNGev-e~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAV-ETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEE-ecccCCCCCCCCEEEECC
Confidence 46667765 566677899999999853
No 261
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.41 E-value=7.3e+02 Score=25.93 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=37.4
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcC-CccC---HHHhhhCCceEEeCCCccH---HHHhhcCEEec
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGD-GVND---APALKLADIGVAMGIAGTE---VAKEASDMVLA 767 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GD-g~ND---~~~l~~A~vgiamg~~~~~---~ak~~ad~vl~ 767 (817)
|.-+||.--.++++.++. .|+.++++|- |.-= +.+|..++.-|.+=.+.+. ..-..||+++.
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 455677766667766643 4889999999 3333 3356666666555322222 23466888876
No 262
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.32 E-value=5.8e+02 Score=26.62 Aligned_cols=62 Identities=13% Similarity=0.138 Sum_probs=35.2
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCCcc----CHHHhhhCCceEEeCCCccH---HHHhhcCEEec
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN----DAPALKLADIGVAMGIAGTE---VAKEASDMVLA 767 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N----D~~~l~~A~vgiamg~~~~~---~ak~~ad~vl~ 767 (817)
|.-+||..-.++++..+. .|+.++.+|-+.. =+.||...+.-|.+-.+.+. ..-..||+++.
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIs 208 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVG 208 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 445677666666666543 4888999998843 23355544444444322222 23456787765
No 263
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=21.90 E-value=2.5e+02 Score=24.57 Aligned_cols=36 Identities=14% Similarity=0.295 Sum_probs=21.7
Q ss_pred HHHHHHHHHcCCeEEEEC---CCC---H--hhHHHHHHHhCCCC
Q 003468 638 RQAIEDCKAAGIRVMVIT---GDN---K--NTAEAICREIGVFG 673 (817)
Q Consensus 638 ~~~I~~l~~~gi~v~~~T---Gd~---~--~~a~~ia~~~gi~~ 673 (817)
++-++.++++|++.+|.= |+. + ..-...|+++||.-
T Consensus 17 ~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y 60 (110)
T PF04273_consen 17 PEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQY 60 (110)
T ss_dssp HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EE
T ss_pred HHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeE
Confidence 467889999999988874 221 1 12356889999953
No 264
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=21.86 E-value=2e+02 Score=23.19 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=35.1
Q ss_pred EeccCCCCcHHHHHHHHHHHHcCCeEEEEC-CCCHhhHHHHHHHhCC
Q 003468 626 MVGLRDPPREEVRQAIEDCKAAGIRVMVIT-GDNKNTAEAICREIGV 671 (817)
Q Consensus 626 ~~~~~d~~r~~~~~~I~~l~~~gi~v~~~T-Gd~~~~a~~ia~~~gi 671 (817)
++.+.++.++.+.+..+.|+++|+++.+.. +.+.......|+..|+
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~ 52 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGA 52 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCC
Confidence 344566677889999999999999988744 4466677777888776
No 265
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=21.51 E-value=7e+02 Score=23.60 Aligned_cols=105 Identities=16% Similarity=0.142 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccH
Q 003468 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHK 714 (817)
Q Consensus 635 ~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 714 (817)
+...++++.+.+++.-.++-.|.+...|..++.++.-.+..... .... . ...+...+..++...+++.+
T Consensus 18 ~~~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~----~~~~-~------~~~~~~~Dv~I~iS~sG~t~ 86 (179)
T TIGR03127 18 EELDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRLMHLGFNVYV----VGET-T------TPSIKKGDLLIAISGSGETE 86 (179)
T ss_pred HHHHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHHhCCCeEEE----eCCc-c------cCCCCCCCEEEEEeCCCCcH
Confidence 45677888888887555556788888888887776433211110 0000 0 01122223444445555544
Q ss_pred --HHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 715 --QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 715 --~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.++++..+++|-.|+++-+.. +.|+-+.||+-+.+.
T Consensus 87 ~~i~~~~~ak~~g~~ii~IT~~~-~s~la~~ad~~l~~~ 124 (179)
T TIGR03127 87 SLVTVAKKAKEIGATVAAITTNP-ESTLGKLADVVVEIP 124 (179)
T ss_pred HHHHHHHHHHHCCCeEEEEECCC-CCchHHhCCEEEEeC
Confidence 567778888888887776654 368889999999876
No 266
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.45 E-value=9.6e+02 Score=25.20 Aligned_cols=63 Identities=11% Similarity=0.164 Sum_probs=38.1
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCCcc---CHH-Hhh------hCCceEEeCCCcc-HHHHhhcCEEecc
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN---DAP-ALK------LADIGVAMGIAGT-EVAKEASDMVLAD 768 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N---D~~-~l~------~A~vgiamg~~~~-~~ak~~ad~vl~~ 768 (817)
|.-+||.--.++++.++. .|+.|+.+|.+.. =.. ||. .|.|-++...... ...-..||+++.-
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 445777776777776653 4899999999954 222 433 3556665542211 2245678888764
No 267
>PRK15482 transcriptional regulator MurR; Provisional
Probab=21.16 E-value=8.4e+02 Score=25.23 Aligned_cols=110 Identities=11% Similarity=0.063 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHcCCeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecCcccH
Q 003468 635 EEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAEPRHK 714 (817)
Q Consensus 635 ~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 714 (817)
+...++++.+.++..-.++-.|.+...|..++..+...+.... ...+... .......+...+..++...+++.+
T Consensus 123 ~~l~~~~~~i~~A~~I~i~G~G~S~~~A~~l~~~l~~~g~~~~----~~~d~~~--~~~~~~~~~~~Dv~i~iS~sg~t~ 196 (285)
T PRK15482 123 ARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVA----CEADTHV--QATVSQALKKGDVQIAISYSGSKK 196 (285)
T ss_pred HHHHHHHHHHHhCCeeEEEEeChhHHHHHHHHHHHHhCCCeeE----EeccHhH--HHHHHhcCCCCCEEEEEeCCCCCH
Confidence 4557788888888876777788888888888877654332111 1111111 111112233334444444444444
Q ss_pred --HHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 715 --QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 715 --~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
..+++..+++|-.|+++-|..+ .|+-+.||+-+...
T Consensus 197 ~~~~~~~~a~~~g~~iI~IT~~~~-s~la~~ad~~l~~~ 234 (285)
T PRK15482 197 EIVLCAEAARKQGATVIAITSLAD-SPLRRLAHFTLDTV 234 (285)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCC-CchHHhCCEEEEcC
Confidence 4667778888988988888744 57778999998765
No 268
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.07 E-value=5.1e+02 Score=27.01 Aligned_cols=63 Identities=21% Similarity=0.211 Sum_probs=35.5
Q ss_pred EEecCcccHHHHHHHHhc--CCCEEEEEcCCcc----CHHHhhhCCceEEeCCCccH-H--HHhhcCEEecc
Q 003468 706 FSRAEPRHKQEIVRLLKE--DGEVVAMTGDGVN----DAPALKLADIGVAMGIAGTE-V--AKEASDMVLAD 768 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~~--~~~~v~~~GDg~N----D~~~l~~A~vgiamg~~~~~-~--ak~~ad~vl~~ 768 (817)
|.-+||.--.++++.++. .|+.++.+|.|.. =+.||...+--|..-.+-+. . .-..||+++.-
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~A 207 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVG 207 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEe
Confidence 344566665666665543 4889999999943 23355444444433322232 2 34678888763
No 269
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.06 E-value=2.4e+02 Score=29.46 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=41.3
Q ss_pred CCeEEEEEeccC---CCCcHHHHHHHHHHHHcCCeEEEE-CCCCHhhHHHHHHHhCCC
Q 003468 619 SRLVFVGMVGLR---DPPREEVRQAIEDCKAAGIRVMVI-TGDNKNTAEAICREIGVF 672 (817)
Q Consensus 619 ~~l~~lG~~~~~---d~~r~~~~~~I~~l~~~gi~v~~~-TGd~~~~a~~ia~~~gi~ 672 (817)
-+|..+|++.+. +|-..+..++++.+++.|+++++. .+-+...+..+|++.|..
T Consensus 194 yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 194 YGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred cCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 467778877763 344556688899999999997766 555777889999999984
No 270
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=20.80 E-value=84 Score=27.93 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=27.7
Q ss_pred CcHHHHHHHHHHHHcCCeEEEECCCCHhhHHHHH
Q 003468 633 PREEVRQAIEDCKAAGIRVMVITGDNKNTAEAIC 666 (817)
Q Consensus 633 ~r~~~~~~I~~l~~~gi~v~~~TGd~~~~a~~ia 666 (817)
-.+++.++++.++++|++++.+|+.........|
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~a 92 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAKLS 92 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhhC
Confidence 5678999999999999999999998765544433
No 271
>PRK11543 gutQ D-arabinose 5-phosphate isomerase; Provisional
Probab=20.72 E-value=6.3e+02 Score=26.69 Aligned_cols=113 Identities=12% Similarity=0.069 Sum_probs=67.7
Q ss_pred CCcHHHHHHHHHHHHcC-CeEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHHhHhhccCCceEEEecC
Q 003468 632 PPREEVRQAIEDCKAAG-IRVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQKNYLRQDGGLLFSRAE 710 (817)
Q Consensus 632 ~~r~~~~~~I~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 710 (817)
.+.++..++++.+.++. .-.+.-.|.+...|..++.++.-...... .++. ..........+...+..++...+
T Consensus 26 ~l~~~~~~~~~~l~~~~~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~----~~~~--~~~~~~~~~~~~~~d~~i~iS~s 99 (321)
T PRK11543 26 RLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAF----FVHP--AEALHGDLGMIESRDVMLFISYS 99 (321)
T ss_pred hccHHHHHHHHHHHhcCCcEEEEecChhHHHHHHHHHHHHcCCCcee----ecCh--HHHhhCCcCccCCCCEEEEEeCC
Confidence 34467788888888875 44556679899999988887754432111 1111 11111111122223344555555
Q ss_pred cccH--HHHHHHHhcCCCEEEEEcCCccCHHHhhhCCceEEeC
Q 003468 711 PRHK--QEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGVAMG 751 (817)
Q Consensus 711 p~~K--~~iv~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 751 (817)
.+.+ .+.++..+++|-.|+++-+.. +.+.-+.||+-+.+.
T Consensus 100 G~t~~~~~~~~~ak~~g~~vI~iT~~~-~s~la~~ad~~l~~~ 141 (321)
T PRK11543 100 GGAKELDLIIPRLEDKSIALLAMTGKP-TSPLGLAAKAVLDIS 141 (321)
T ss_pred CCcHHHHHHHHHHHHcCCeEEEEECCC-CChhHHhCCEEEEcC
Confidence 5554 566778888887777766553 357889999999765
No 272
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=20.69 E-value=2.5e+02 Score=29.27 Aligned_cols=54 Identities=19% Similarity=0.383 Sum_probs=41.8
Q ss_pred CCeEEEEEecc---CCCCcHHHHHHHHHHHHcCCeEEEE-CCCCHhhHHHHHHHhCCC
Q 003468 619 SRLVFVGMVGL---RDPPREEVRQAIEDCKAAGIRVMVI-TGDNKNTAEAICREIGVF 672 (817)
Q Consensus 619 ~~l~~lG~~~~---~d~~r~~~~~~I~~l~~~gi~v~~~-TGd~~~~a~~ia~~~gi~ 672 (817)
-+|..+|++.. .+|-..+..++++.+++.|+++++. ..-+...+..+|++.|..
T Consensus 188 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~ 245 (282)
T cd01017 188 YGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAK 245 (282)
T ss_pred CCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCc
Confidence 46777887766 3445566788899999999998877 556678889999999873
No 273
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.63 E-value=9.8e+02 Score=24.99 Aligned_cols=62 Identities=19% Similarity=0.204 Sum_probs=36.5
Q ss_pred EEecCcccHHHHHHHHh--cCCCEEEEEcCCcc----CHHHhhhCCceEEeCCCcc-H--HHHhhcCEEec
Q 003468 706 FSRAEPRHKQEIVRLLK--EDGEVVAMTGDGVN----DAPALKLADIGVAMGIAGT-E--VAKEASDMVLA 767 (817)
Q Consensus 706 ~~r~~p~~K~~iv~~l~--~~~~~v~~~GDg~N----D~~~l~~A~vgiamg~~~~-~--~ak~~ad~vl~ 767 (817)
|.=+||.--.++++.++ -.|+.|+.+|-|.- =+.||...+.-|.+-...+ + ..-..||+++.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~ 207 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVA 207 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEE
Confidence 44566666666666654 24788999998854 2345555555554432222 2 23467888776
No 274
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.54 E-value=3.7e+02 Score=28.08 Aligned_cols=44 Identities=16% Similarity=0.414 Sum_probs=30.2
Q ss_pred cCCCCcHHHHHHHHHHHHcCCeE---EEECCCCHhhHH------HHHHHhCCC
Q 003468 629 LRDPPREEVRQAIEDCKAAGIRV---MVITGDNKNTAE------AICREIGVF 672 (817)
Q Consensus 629 ~~d~~r~~~~~~I~~l~~~gi~v---~~~TGd~~~~a~------~ia~~~gi~ 672 (817)
+.+.++++.++.++.+++.|+++ ++.-||++.+.. ..|+++|+.
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~ 63 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMI 63 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 44567788888888888877754 444688776643 346677874
No 275
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=20.53 E-value=2.8e+02 Score=25.18 Aligned_cols=74 Identities=15% Similarity=0.117 Sum_probs=0.0
Q ss_pred ccCCeEEEEEeccCCCCcHHHHHHHHHHHHcCC--eEEEECCCCHhhHHHHHHHhCCCCCCccccccccChhHHHHHHHH
Q 003468 617 IESRLVFVGMVGLRDPPREEVRQAIEDCKAAGI--RVMVITGDNKNTAEAICREIGVFGAHEDISSQSITGKEFMDIHNQ 694 (817)
Q Consensus 617 ~e~~l~~lG~~~~~d~~r~~~~~~I~~l~~~gi--~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 694 (817)
.+.+-..+|+-++...-.+.+++.++.|+++|. -.+++-|-.+..-..-.+++|+
T Consensus 50 ~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gv----------------------- 106 (132)
T TIGR00640 50 VEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGV----------------------- 106 (132)
T ss_pred HHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCC-----------------------
Q ss_pred hHhhccCCceEEEecCcccHHHHHHH
Q 003468 695 KNYLRQDGGLLFSRAEPRHKQEIVRL 720 (817)
Q Consensus 695 ~~~~~~~~~~v~~r~~p~~K~~iv~~ 720 (817)
+..+....++.+....+..
T Consensus 107 -------d~~~~~gt~~~~i~~~l~~ 125 (132)
T TIGR00640 107 -------AEIFGPGTPIPESAIFLLK 125 (132)
T ss_pred -------CEEECCCCCHHHHHHHHHH
No 276
>PRK04017 hypothetical protein; Provisional
Probab=20.38 E-value=1.8e+02 Score=26.31 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=22.9
Q ss_pred HHHHHHHhcCCCE-EEEEcCCccCHHHhhhCCc
Q 003468 715 QEIVRLLKEDGEV-VAMTGDGVNDAPALKLADI 746 (817)
Q Consensus 715 ~~iv~~l~~~~~~-v~~~GDg~ND~~~l~~A~v 746 (817)
.+++..|++..+. +..+=-|-+|..+|+.+++
T Consensus 10 ~e~i~~L~e~s~~g~vIVVEGk~D~~~L~~lGv 42 (132)
T PRK04017 10 EEIIEELKEFSEAGAPIIVEGKRDVESLRKLGV 42 (132)
T ss_pred HHHHHHHHHhcCCCCEEEEeCccHHHHHHHcCC
Confidence 4566667666544 5555678889999999977
Done!