Query 003469
Match_columns 817
No_of_seqs 420 out of 3137
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 02:19:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 2E-104 8E-109 925.9 52.5 622 130-815 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1.9E-97 6E-102 871.3 49.8 610 130-814 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.1E-77 3.8E-82 731.4 41.9 542 136-814 3-605 (926)
4 3afg_A Subtilisin-like serine 100.0 1.5E-60 5.2E-65 547.9 31.0 338 86-677 60-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 3.1E-58 1.1E-62 512.6 18.5 320 85-676 23-392 (395)
6 3t41_A Epidermin leader peptid 100.0 2.6E-55 8.9E-60 501.9 28.2 337 85-677 65-466 (471)
7 2p4e_P Proprotein convertase s 100.0 1.5E-56 5.1E-61 516.0 8.3 301 85-636 108-423 (692)
8 1r6v_A Subtilisin-like serine 100.0 1.6E-54 5.5E-59 502.9 24.8 340 86-683 53-446 (671)
9 1y9z_A Alkaline serine proteas 100.0 1.8E-52 6E-57 473.0 28.6 386 142-696 15-436 (441)
10 1dbi_A AK.1 serine protease; h 100.0 8.9E-52 3E-56 438.6 22.7 258 142-675 22-279 (280)
11 1gci_A Subtilisin; hydrolase, 100.0 1.2E-51 4.2E-56 434.7 21.1 255 142-675 15-269 (269)
12 1thm_A Thermitase; hydrolase(s 100.0 2.3E-51 7.8E-56 435.6 22.6 257 142-675 22-278 (279)
13 1r0r_E Subtilisin carlsberg; h 100.0 1.7E-51 6E-56 435.3 20.6 256 142-675 15-274 (274)
14 1to2_E Subtilisin BPN'; serine 100.0 4.3E-51 1.5E-55 433.7 21.3 258 142-676 15-276 (281)
15 3zxy_A Subtilisin-like protein 100.0 6.2E-52 2.1E-56 441.6 14.7 266 151-675 3-274 (282)
16 4h6x_A Thiazoline oxidase/subt 100.0 3.9E-53 1.3E-57 464.8 4.5 304 142-675 22-337 (357)
17 2x8j_A Intracellular subtilisi 100.0 4E-51 1.4E-55 443.1 16.4 264 142-676 32-311 (327)
18 2ixt_A 36KDA protease; serine 100.0 7.9E-50 2.7E-54 431.5 23.8 286 142-670 17-309 (310)
19 4h6w_A N-terminal cyanobactin 100.0 4.2E-51 1.4E-55 441.0 11.7 275 138-676 9-288 (306)
20 2z30_A TK-subtilisin; thermoco 100.0 1.3E-50 4.3E-55 438.7 15.2 265 141-676 18-317 (320)
21 1wmd_A Protease; alpha-beta hy 100.0 1.1E-48 3.7E-53 441.8 21.2 291 142-678 12-320 (434)
22 2iy9_A SUBA; toxin, shiga, pla 100.0 3.2E-49 1.1E-53 433.3 16.4 269 142-676 34-329 (347)
23 3lpc_A APRB2; protease, subtil 100.0 6.8E-49 2.3E-53 429.9 16.2 300 142-677 23-338 (340)
24 1sh7_A Extracellular subtilisi 100.0 7E-48 2.4E-52 409.0 22.5 235 142-636 20-257 (284)
25 3lxu_X Tripeptidyl-peptidase 2 100.0 1.6E-47 5.5E-52 461.2 25.8 357 232-814 267-652 (1354)
26 2pwa_A Proteinase K; structure 100.0 7.7E-48 2.6E-52 407.6 16.8 225 152-636 28-260 (279)
27 2b6n_A Proteinase K; S binding 100.0 3E-47 1E-51 403.7 19.4 237 142-636 22-261 (278)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 5E-47 1.7E-51 402.2 20.3 236 142-637 22-260 (276)
29 1p8j_A Furin precursor; prohor 100.0 3.5E-46 1.2E-50 424.7 18.1 293 142-677 29-331 (471)
30 2qtw_B Proprotein convertase s 100.0 5.1E-46 1.8E-50 417.8 18.2 286 143-675 18-313 (546)
31 3f7m_A Alkaline serine proteas 100.0 4.8E-46 1.7E-50 395.3 16.0 225 152-636 29-261 (279)
32 2oxa_A Extracellular serine pr 100.0 1.9E-45 6.5E-50 430.9 15.0 152 151-349 66-222 (600)
33 2id4_A Kexin; KEX2, kexin, fur 100.0 4.6E-45 1.6E-49 418.1 17.6 286 142-677 45-343 (503)
34 3hjr_A Extracellular serine pr 100.0 6.6E-43 2.3E-47 411.2 19.0 153 151-349 66-222 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 2.5E-25 8.4E-30 255.1 5.3 100 262-368 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.8 1.2E-21 4.2E-26 213.9 9.7 103 264-368 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 8.5E-10 2.9E-14 125.5 12.2 79 288-368 284-374 (544)
38 3cnq_P Subtilisin BPN'; unclea 98.6 1.7E-07 5.7E-12 78.5 9.3 47 85-132 33-79 (80)
39 2w2n_P Proprotein convertase s 98.6 2.1E-07 7E-12 83.3 10.1 44 85-128 70-113 (114)
40 2qtw_A Proprotein convertase s 98.5 7.2E-07 2.5E-11 80.7 10.1 44 85-128 80-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.4 1.1E-06 3.9E-11 72.4 9.3 42 87-128 31-75 (76)
42 3icu_A E3 ubiquitin-protein li 97.7 0.00013 4.3E-09 70.9 9.7 85 417-508 82-176 (194)
43 2z30_B TK-subtilisin; thermoco 96.4 0.005 1.7E-07 48.6 5.5 43 85-128 22-64 (65)
44 2ys4_A Hydrocephalus-inducing 95.7 0.025 8.4E-07 50.9 7.6 73 732-810 41-114 (122)
45 2ek8_A Aminopeptidase; metallo 93.8 0.15 5.2E-06 56.2 9.2 75 425-506 106-182 (421)
46 2r39_A FIXG-related protein; s 90.8 1.4 4.6E-05 39.0 9.8 52 735-787 34-86 (118)
47 3qbt_B Inositol polyphosphate 90.0 1.6 5.5E-05 39.9 9.8 81 732-812 43-135 (140)
48 1y9z_A Alkaline serine proteas 89.8 0.68 2.3E-05 51.3 8.5 29 538-579 183-211 (441)
49 2e6j_A Hydin protein; PAPD, st 88.5 1.6 5.5E-05 37.9 8.4 78 723-802 15-96 (112)
50 3lxu_X Tripeptidyl-peptidase 2 88.2 0.19 6.5E-06 62.0 2.7 24 151-174 32-55 (1354)
51 3idu_A Uncharacterized protein 81.6 6.4 0.00022 35.1 8.8 50 732-784 33-84 (127)
52 3iib_A Peptidase M28; YP_92679 81.4 3.2 0.00011 45.9 8.4 78 429-507 124-215 (444)
53 3fed_A Glutamate carboxypeptid 80.4 1.2 4.2E-05 52.0 4.7 38 429-472 150-187 (707)
54 3kas_A Transferrin receptor pr 79.3 1.7 5.7E-05 50.3 5.3 39 430-474 128-166 (640)
55 3qis_A Inositol polyphosphate 78.3 13 0.00045 39.6 11.8 81 732-812 46-138 (366)
56 2qsv_A Uncharacterized protein 74.7 20 0.0007 35.1 11.2 76 734-812 21-103 (220)
57 3isy_A Bsupi, intracellular pr 73.3 20 0.00068 31.5 9.4 74 732-805 18-110 (120)
58 2qsv_A Uncharacterized protein 68.8 17 0.00059 35.6 9.1 76 725-802 126-206 (220)
59 2l04_A Major tail protein V; b 63.2 9 0.00031 31.9 4.8 29 760-788 8-36 (91)
60 3zyz_A Beta-D-glucoside glucoh 62.8 24 0.00082 41.2 10.1 52 734-786 615-675 (713)
61 1m1s_A WR4; structural genomic 61.0 25 0.00084 30.7 7.4 50 735-786 26-76 (116)
62 1msp_A MSP, major sperm protei 58.2 19 0.00064 32.0 6.3 47 736-784 29-76 (126)
63 2x41_A Beta-glucosidase; hydro 57.9 22 0.00075 41.7 8.7 53 733-786 616-678 (721)
64 3abz_A Beta-glucosidase I; gly 55.8 40 0.0014 40.2 10.4 64 719-783 717-795 (845)
65 1z9l_A Vesicle-associated memb 55.6 24 0.00081 31.3 6.6 51 733-785 28-79 (128)
66 2l0d_A Cell surface protein; s 51.1 40 0.0014 29.3 7.1 52 731-785 18-72 (114)
67 1row_A SSP-19, MSP-domain prot 49.8 33 0.0011 29.5 6.3 48 736-785 19-67 (109)
68 1wic_A Hypothetical protein ri 45.9 37 0.0013 31.1 6.4 48 736-785 39-87 (152)
69 2cri_A Vesicle-associated memb 43.5 32 0.0011 31.4 5.5 48 736-785 35-83 (147)
70 1w8o_A Bacterial sialidase; 3D 34.9 1.7E+02 0.0059 32.9 11.3 79 721-802 363-444 (601)
71 3ndz_E Endoglucanase D; cellot 32.9 1.7E+02 0.0058 24.9 8.1 51 734-784 17-87 (107)
72 1wgl_A TOLL-interacting protei 32.6 25 0.00087 26.6 2.4 33 601-633 5-37 (59)
73 3o0l_A Uncharacterized protein 29.9 1.2E+02 0.0043 26.0 6.8 50 731-780 37-92 (112)
74 3rfr_A PMOB; membrane, oxidore 29.8 2.2E+02 0.0075 30.1 9.6 69 733-806 299-401 (419)
75 4ep8_B Urease subunit beta; al 25.3 80 0.0027 26.4 4.3 49 732-781 18-82 (101)
76 1ni7_A ER75, hypothetical prot 24.9 52 0.0018 30.2 3.6 32 595-627 79-110 (155)
77 3hrz_B Cobra venom factor; ser 24.2 1.4E+02 0.0047 29.7 7.0 65 719-785 85-155 (252)
78 1exg_A EXO-1,4-beta-D-glycanas 24.0 3.3E+02 0.011 23.1 8.7 50 734-783 21-89 (110)
79 1yew_A Particulate methane mon 23.9 6.4E+02 0.022 26.3 11.7 41 769-809 321-372 (382)
80 2hr0_B Complement C3 alpha' ch 23.6 3.2E+02 0.011 32.7 11.3 65 719-785 84-155 (915)
81 3g0m_A Cysteine desulfuration 21.1 50 0.0017 29.8 2.6 33 593-626 70-102 (141)
82 3erx_A Pseudoazurin; copper pr 21.1 1.1E+02 0.0038 26.7 4.9 21 760-780 15-35 (123)
83 4acq_A Alpha-2-macroglobulin; 20.6 6.7E+02 0.023 31.7 13.8 65 719-785 772-840 (1451)
84 4hci_A Cupredoxin 1; structura 20.2 71 0.0024 26.5 3.3 19 762-780 24-42 (100)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=2.3e-104 Score=925.86 Aligned_cols=622 Identities=35% Similarity=0.575 Sum_probs=526.9
Q ss_pred cCCCCcccCCCC--CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCC-CCCcccccCCCCCCccCCCce
Q 003469 130 TTHTPEFLGLPT--GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVP-KYRGKCEVDPDTKRSFCNGKI 206 (817)
Q Consensus 130 ~~~s~~~~g~~~--~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki 206 (817)
++++|+|+|+.. .+|.. +++|+||+|||||||||++||+|.+. ++.+++ +|+|.|+.+.+|....||+|+
T Consensus 1 Tt~s~~flgl~~~~~~w~~----~~~G~gViVaViDTGId~~Hp~f~d~---g~~p~p~~wkg~c~~g~~f~~~~cN~ki 73 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPA----SGLGQDVIVAVLDSGIWPESASFQDD---GMPEIPKRWKGICKPGTQFNASMCNRKL 73 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHH----HGGGTTCEEEEEESCBCTTSGGGCCT---TCCCCCTTCCCCBCCBTTBCTTSCCSSE
T ss_pred CCCChHHcCCCCchhhHhc----cCCCCCCEEEEEccCCCCCChhhccC---CCCCCccccccccccCccccccccccce
Confidence 357788999863 47776 68999999999999999999999987 466777 999999999999999999999
Q ss_pred eeeeehhHHHHhhccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCH
Q 003469 207 IGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFV 286 (817)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~ 286 (817)
+++++|.++..... .+...+..+++|.+||||||||||||+...+.+..|+..+.+.||||+|+|++||+++.. ++..
T Consensus 74 ig~~~f~~~~~~~~-~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~-g~~~ 151 (649)
T 3i6s_A 74 IGANYFNKGILAND-PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE-GTFT 151 (649)
T ss_dssp EEEEECCHHHHHHC-TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT-EECH
T ss_pred eeeEeccCcccccc-cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCC-CCCH
Confidence 99999987765433 344455667889999999999999999877777778877889999999999999999986 4889
Q ss_pred HHHHHHHHHHHHcCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeee
Q 003469 287 ADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAA 366 (817)
Q Consensus 287 ~di~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~ 366 (817)
+++++||+||+++|+||||||||.... ....+++..++++|+++|++||+||||+|+...++++.+||+|+|||+
T Consensus 152 ~~i~~Ai~~A~~~gvdVIn~SlG~~~~-----~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAs 226 (649)
T 3i6s_A 152 SDLIAAMDQAVADGVDMISISYGYRFI-----PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASG 226 (649)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCCSC-----CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCCccCCc-----ccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeee
Confidence 999999999999999999999998632 346789999999999999999999999999988899999999999999
Q ss_pred ecCcceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccc--cccEEEEecccc
Q 003469 367 IDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLV--EGNILLCGYSFN 444 (817)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~--~gki~~~~~~~~ 444 (817)
+.+|.|...+.+++++.+.+.++++.......+|+++.. ....|.. ..++...+ +|||++|.+
T Consensus 227 t~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~-----------~~~~C~~-~~l~~~~vdl~GkIvlc~~--- 291 (649)
T 3i6s_A 227 HTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK-----------TLSDCSS-EELLSQVENPENTIVICDD--- 291 (649)
T ss_dssp ECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT-----------TTTTCCC-HHHHTTSSSGGGCEEEECC---
T ss_pred ecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc-----------ccccccc-ccccccccccCCcEEEEeC---
Confidence 999999999999999999999998877667789998854 3456764 34666666 999999987
Q ss_pred cccCcchHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeee
Q 003469 445 FVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTG 524 (817)
Q Consensus 445 ~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 524 (817)
|.+.+.++..+++++|+.++|++|+. .......+.+|.+.+.. ++++.|+.|+++... +.. .+.|..+
T Consensus 292 ---g~~~~~~k~~~~~~~Ga~g~i~~n~~----~~~~~~~~~~P~~~v~~-~~g~~i~~yi~s~~~--~~a-~i~~~~t- 359 (649)
T 3i6s_A 292 ---NGDFSDQMRIITRARLKAAIFISEDP----GVFRSATFPNPGVVVNK-KEGKQVINYVKNSVT--PTA-TITFQET- 359 (649)
T ss_dssp ---CSCHHHHHHHHHHHTCSEEEEECCCG----GGGGCCCCCSCEEEECH-HHHHHHHHHHHTCSS--CEE-EEEEEEE-
T ss_pred ---CCccHHHHHHHHHhcCceEEEEecCc----cccccccCcCCEEEEcH-HHHHHHHHHHhcCCC--ceE-EEeecce-
Confidence 57788999999999999999999986 23345567899999986 999999999987542 111 1223222
Q ss_pred EecCCCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCc----cCCceEeecCccc
Q 003469 525 TIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANF----VGEGFALISGTSM 600 (817)
Q Consensus 525 ~~~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~----~~~~y~~~sGTSm 600 (817)
.......+.++.||||||+.+ .++++||||+|||++|+|+++......... ....|..||||||
T Consensus 360 -------~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSM 427 (649)
T 3i6s_A 360 -------YLDTKPAPVVAASSARGPSRS-----YLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSM 427 (649)
T ss_dssp -------ECCCSSCCEECTTSCCSSCTT-----CTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHH
T ss_pred -------eeccCCCCcccccCCCCCCCC-----CCCccCCeEEeCCCCeEeecCCCCCccccccccccccceeccccccc
Confidence 122355789999999999986 356999999999999999997643211100 2268999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCCCeee
Q 003469 601 AAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGLIF 680 (817)
Q Consensus 601 AaP~VAG~aALl~q~~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~ 680 (817)
|||||||++|||||+||+|+|++||++||+||++++..+.|+.+.. ...+++++.||+|+||+.+|++|+|||
T Consensus 428 AaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~-------~~~~a~~~~~GaG~vn~~~A~~pGLvy 500 (649)
T 3i6s_A 428 AAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSD-------NNKAATPLDMGAGHVDPNRALDPGLVY 500 (649)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETT-------TSSBCCHHHHTTCBCCHHHHTCCSEEC
T ss_pred ccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccc-------cCCcCCcCCCCeeeeCHHHhcCccccc
Confidence 9999999999999999999999999999999999999898887542 355788899999999999999999999
Q ss_pred ecCchhhhhccccCCCCCceeeecccCcc----cCCCCCCCCcCCCCcEEEee-ecce-----EEEEEEEEEcCCC-ceE
Q 003469 681 DAGYEDYLGFLCTTPGIDIHEIRNYTNQP----CNYSMGHPYNFNTPSITVAH-LVKT-----QVVTRTVTNVAEE-ETY 749 (817)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~ln~ps~~~~~-~~~~-----~~~~~tv~n~~~~-~ty 749 (817)
|+..+||++|||.+++ +..+|+.+++.. |.. .+.|||||||++.. +.+. ++|+|||||+|+. .+|
T Consensus 501 d~~~~dy~~flc~~~y-~~~~i~~~~~~~~~~~C~~---~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y 576 (649)
T 3i6s_A 501 DATPQDYVNLLCSLNF-TEEQFKTIARSSASHNCSN---PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATY 576 (649)
T ss_dssp CCCHHHHHHHHHTTCC-CHHHHHHHHTTTSCC-CCC---CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEE
T ss_pred cCCchhHHHhhhcCCC-CcccceeeecCCCcCCCCC---chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEE
Confidence 9999999999999986 888888887653 764 57799999999987 5555 8999999999998 999
Q ss_pred EEEEEcCCCcEEEEecCeEEEc-CCCEEEEEEEEEEecC-CCceEEEEEEEEeC-CCcEEEEeEEEEee
Q 003469 750 SMSARMQPAIAIEVNPPAMTLK-PGASRKFTVTLTVRSV-TGTYSFGEICMKGS-RGHKVNIPVIAQGN 815 (817)
Q Consensus 750 ~~~~~~~~~~~v~~~~~~~tv~-~g~~~~~~v~~~~~~~-~~~~~~G~i~~~~~-~~~~l~iP~~~~~~ 815 (817)
++.++.|.|+.|+|+|.+|++. .||+++|+|+|+.... .+.+.+|+|+|+++ +.|.||+|++++..
T Consensus 577 ~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 577 KAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 9999999999999999999996 8999999999998643 45678999999974 78999999998754
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.9e-97 Score=871.29 Aligned_cols=610 Identities=35% Similarity=0.581 Sum_probs=482.5
Q ss_pred cCCCCcccCCCCCCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCC-CCCcccccCCCCCCccCCCceee
Q 003469 130 TTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVP-KYRGKCEVDPDTKRSFCNGKIIG 208 (817)
Q Consensus 130 ~~~s~~~~g~~~~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki~~ 208 (817)
++++|+|+|++...|.. ..+|+||+|||||||||++||+|.+. ++.+++ +|+|.|+.+.++ .||+|+++
T Consensus 1 tt~s~~flGl~~~~~~~----~~~G~gViVgViDTGId~~Hp~f~d~---g~~~~~~~w~g~~~~~~~~---~~n~k~ig 70 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRR----SQVESNIVVGVLDTGIWPESPSFDDE---GFSPPPPKWKGTCETSNNF---RCNRKIIG 70 (621)
T ss_dssp CCSHHHHTTCCTTCCCC----HHHHTTCEEEEEESCBCTTSGGGCCT---TCCCCCTTCCCCBCCSSSC---CCCSSEEE
T ss_pred CCCChhHcCCCcccccc----CCCCCCCEEEEEecCCCCCChhhcCC---CCCCcccccccccccCCCc---ccCcceee
Confidence 46789999998878876 57999999999999999999999986 455666 999999988776 59999999
Q ss_pred eeehhHHHHhhccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHH
Q 003469 209 AQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVAD 288 (817)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~d 288 (817)
+++|..+. .....+..+|+|++||||||||||||+.....+..|...+.++||||+|+|++||+|++. ++..++
T Consensus 71 ~~~~~~~~-----~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~-g~~~~d 144 (621)
T 3vta_A 71 ARSYHIGR-----PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCSDTD 144 (621)
T ss_dssp EEECCCSS-----SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT-EECHHH
T ss_pred eeecccCC-----ccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCC-CCCHHH
Confidence 99996542 122334567889999999999999999877766777777788999999999999999986 578899
Q ss_pred HHHHHHHHHHcCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeeec
Q 003469 289 VVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAID 368 (817)
Q Consensus 289 i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~ 368 (817)
+++||++|+++|+||||||||+..+.+ ...++++.++++|+++||+||+||||+|+...++++.+||+++|++++.
T Consensus 145 i~~a~~~a~~~g~dVin~SlG~~~~~~----~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~ 220 (621)
T 3vta_A 145 ILAAYDDAIADGVDIISLSVGGANPRH----YFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTM 220 (621)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCCGGG----GGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECC
T ss_pred HHHHHHHHHHhCCCEEEecCCCCCCCC----cCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeec
Confidence 999999999999999999999876543 3578899999999999999999999999999999999999999999999
Q ss_pred CcceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccC
Q 003469 369 DRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTG 448 (817)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g 448 (817)
++.+...+.++++..+.+..+... ....++++...+...... .......|. ...++...++|||++|.+.
T Consensus 221 d~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~v~gkivl~~~~------ 290 (621)
T 3vta_A 221 DRKFVTQVQIGNGQSFQGVSINTF--DNQYYPLVSGRDIPNTGF-DKSTSRFCT-DKSVNPNLLKGKIVVCEAS------ 290 (621)
T ss_dssp SEEEEEEEEETTSCEEEEBCCCCS--CCEEECEEETTTSCCTTC-CHHHHTTTC-TTCSCGGGTTTSEEECSSC------
T ss_pred cccceeeEEeccCceeeeeecccC--CCcccccccccccccccc-ccccccccc-ccccccccccceEEEEecC------
Confidence 999999999999999988776543 356677777655432111 112233454 3557778899999999864
Q ss_pred cchHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecC
Q 003469 449 TASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGD 528 (817)
Q Consensus 449 ~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (817)
+..+..+....|+.+++++++.... ...+.+|...+.. +++..+..|+....... . ..+..
T Consensus 291 ---~~~~~~~~~~~Ga~gvi~~~~~~~~-----~~~~~lP~~~v~~-~~g~~i~~~~~~~~~~~--a--~~~~~------ 351 (621)
T 3vta_A 291 ---FGPHEFFKSLDGAAGVLMTSNTRDY-----ADSYPLPSSVLDP-NDLLATLRYIYSIRSPG--A--TIFKS------ 351 (621)
T ss_dssp ---CCHHHHHHHHTTCSEEEEECSCCSS-----CCCCSSSEEEECH-HHHHHHHHHHHHHSSCC--E--EECCC------
T ss_pred ---CChhHHhhhhcceeEEEEEecCCCc-----ccccccceEEECH-HHHHHHHHHHhccCCcc--e--EEecc------
Confidence 2345667788999999999875432 2356789988877 89999999887653211 1 11111
Q ss_pred CCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHH
Q 003469 529 GLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGI 608 (817)
Q Consensus 529 ~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~ 608 (817)
........+.++.||||||+.. ..+++||||+|||++|+|+++..........+..|..|||||||||||||+
T Consensus 352 --~~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGv 424 (621)
T 3vta_A 352 --TTILNASAPVVVSFSSRGPNRA-----TKDVIKPDISGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGI 424 (621)
T ss_dssp --EEEECTTCCCBCTTSCCCSCTT-----CTTSCSCCEEEECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHH
T ss_pred --eEeccCCCCceeeecCCCCCCC-----CCCeeccccccCCcceEeecCccccccCcCCCCcceEecCccccchhhhhH
Confidence 1122345679999999999864 235899999999999999997654433333456899999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCCCeeeecCchhhh
Q 003469 609 AALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYL 688 (817)
Q Consensus 609 aALl~q~~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~ 688 (817)
+|||||+||+|+|++||++||+||++++..+. ++.+++||+|+||+.+|++|+||||+..+||+
T Consensus 425 aALl~q~~P~~spa~IksaLmtTA~~~~~~~~----------------~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~ 488 (621)
T 3vta_A 425 ATYVKTYNPTWSPAAIKSALMTTASPMNARFN----------------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYV 488 (621)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTC----------------TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC
T ss_pred HHHHHHHCCCCCHHHHHHHHHhcCCcccccCC----------------CCCchhcCCCccCHHHhcCCCeEeecccchhh
Confidence 99999999999999999999999999875443 45678999999999999999999999999999
Q ss_pred hccccCCCCCceeeecccC--cccCC-CCCCCCcCCCCcEEEe---eecceEEEEEEEEEcCCC-ceEEEEEEcCCCcEE
Q 003469 689 GFLCTTPGIDIHEIRNYTN--QPCNY-SMGHPYNFNTPSITVA---HLVKTQVVTRTVTNVAEE-ETYSMSARMQPAIAI 761 (817)
Q Consensus 689 ~~~~~~~~~~~~~i~~~~~--~~~~~-~~~~~~~ln~ps~~~~---~~~~~~~~~~tv~n~~~~-~ty~~~~~~~~~~~v 761 (817)
.|||.+++ +..+++.+++ ..|.. ......|||+|||++. ++..+++|+|||||++.. .||+++++.|.|++|
T Consensus 489 ~~lc~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v 567 (621)
T 3vta_A 489 KFLCGQGY-NTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTI 567 (621)
T ss_dssp ------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEE
T ss_pred hhhcccCC-CchhheeeeccccccCCCCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEE
Confidence 99999976 8888887775 34553 3345779999999985 445678999999999999 999999999999999
Q ss_pred EEecCeEEEc-CCCEEEEEEEEEEecCCCceEEEEEEEEeCCCcEEEEeEEEEe
Q 003469 762 EVNPPAMTLK-PGASRKFTVTLTVRSVTGTYSFGEICMKGSRGHKVNIPVIAQG 814 (817)
Q Consensus 762 ~~~~~~~tv~-~g~~~~~~v~~~~~~~~~~~~~G~i~~~~~~~~~l~iP~~~~~ 814 (817)
+|+|.+|+++ .||+++|+|||+.. ..+.+++|+|+|+ ++.|.||+|++|++
T Consensus 568 ~V~P~~l~f~~~~~~~~~~vt~~~~-~~~~~~~g~l~w~-d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 568 SVNPNVLSFNGLGDRKSFTLTVRGS-IKGFVVSASLVWS-DGVHYVRSPITITS 619 (621)
T ss_dssp EEESSEEEECSTTCEEEEEEEEEEC-CCSSEEEEEEEEE-CSSCCCEEEEEEEC
T ss_pred EEecCEEEEcCCCcEEEEEEEEEec-CCCceEEEEEEEE-cCCEEEEeCEEEEE
Confidence 9999999996 68999999999864 4567899999997 57899999999975
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.1e-77 Score=731.43 Aligned_cols=542 Identities=20% Similarity=0.270 Sum_probs=405.0
Q ss_pred ccCCCCCCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccC----------CCCCCccCCCc
Q 003469 136 FLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVD----------PDTKRSFCNGK 205 (817)
Q Consensus 136 ~~g~~~~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~n~k 205 (817)
+++++ .+|.. +++|+||+|||||||||++||+|.+.. .|++.|... ......+||+|
T Consensus 3 ~i~~~-~~w~~----~~~G~GV~VaVIDTGId~~Hp~f~~~~--------~~~~~~~~~~~~~~~~~~~g~~~g~~~n~K 69 (926)
T 1xf1_A 3 PSQVK-TLQEK----AGKGAGTVVAVIDAGFDKNHEAWRLTD--------KTKARYQSKEDLEKAKKEHGITYGEWVNDK 69 (926)
T ss_dssp TTCCH-HHHHH----HCSCTTCEEEEEESCCTTCCCCCSCCS--------CCCSSCCHHHHHHHHHHTTTCCCCBCCSSS
T ss_pred ccccH-HHHhc----cCCCCCcEEEEEecCCCCCCHhHcCCC--------CCcccccchhhhcccccccCcccccccCcc
Confidence 34543 57766 589999999999999999999999653 465555321 11123489999
Q ss_pred eeeeeehhHHHHhhccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCC-C
Q 003469 206 IIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFG-G 284 (817)
Q Consensus 206 i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~-~ 284 (817)
++++++|.++ ....|+.||||||||||||+.....+. .+.+.||||+|+|++||++++.+. +
T Consensus 70 ii~~~~~~~~-------------~~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~ 132 (926)
T 1xf1_A 70 VAYYHDYSKD-------------GKTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLAD 132 (926)
T ss_dssp CCEEEESCCC-------------SCCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHH
T ss_pred cceeeccccC-------------CCCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCC
Confidence 9999998542 112288999999999999986433211 235789999999999999987543 3
Q ss_pred CHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCC--------------
Q 003469 285 FVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP-------------- 350 (817)
Q Consensus 285 ~~~di~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-------------- 350 (817)
..+++++||+||+++|+||||||||+..++. ..+.+.+..++++|+++|++||+||||+|...
T Consensus 133 ~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~~---~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~ 209 (926)
T 1xf1_A 133 YARNYAQAIRDAINLGAKVINMSFGNAALAY---ANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYG 209 (926)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCSSCCCTT---CCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCB
T ss_pred cHHHHHHHHHHHHHhCCcEEEECCCCCCCCc---cccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcc
Confidence 5578999999999999999999999865432 22566788999999999999999999999632
Q ss_pred -CCccCCCCcEEEEeeeecCcceeeEEEe-CCCcEEEeeecC--CCCCCCceEEEEEcccccccccccccCCCCCCCccc
Q 003469 351 -KTLVSYSPWITTVAAAIDDRRYKNHLNL-GNGKILAGIGLS--PATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEV 426 (817)
Q Consensus 351 -~~~~~~~~~vitVgA~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 426 (817)
...++.+||+|+|||++.++.+...+.+ +++....+..+. ........|++++... .|.. ..
T Consensus 210 tv~~PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------------g~~~-~~ 275 (926)
T 1xf1_A 210 VVGTPAAADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------------GTKE-DD 275 (926)
T ss_dssp CCCSCTTTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------------SCST-TT
T ss_pred eecCcccCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------------CCCc-cc
Confidence 1224468999999999999999888887 444333333321 1222356788888543 2532 22
Q ss_pred cccccccccEEEEecccccccCcchHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHh
Q 003469 427 LNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYN 506 (817)
Q Consensus 427 ~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~ 506 (817)
+ .+++|||++|.| |.|.+.+++.+++++||.++|++|+..............+|...+.. +++..|..
T Consensus 276 ~--~~v~Gkivl~~r------g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~-~~g~~l~~--- 343 (926)
T 1xf1_A 276 F--KDVKGKIALIER------GDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISR-KDGLLLKD--- 343 (926)
T ss_dssp T--TTCTTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECH-HHHHHHHH---
T ss_pred h--hhcCCeEEEEEC------CCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeH-HHHHHHHh---
Confidence 3 579999999987 57889999999999999999999976543222234567899988877 78877763
Q ss_pred ccCCcCCcceeEeeeeeeEecCCCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCC
Q 003469 507 TSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEAN 586 (817)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~ 586 (817)
. + ...++|..+.. .......+.++.||||||+.++ ++||||+|||++|+|+++
T Consensus 344 -~----~-~~ti~~~~~~~------~~~~~~~~~~a~FSSrGp~~~~-------~lKPDI~APG~~I~sa~~-------- 396 (926)
T 1xf1_A 344 -N----P-QKTITFNATPK------VLPTASGTKLSRFSSWGLTADG-------NIKPDIAAPGQDILSSVA-------- 396 (926)
T ss_dssp -C----S-SCEEEECSSCE------EEECSSCSBCCTTSCCCBCTTS-------CBSCCEEEECCCEEESSS--------
T ss_pred -C----C-ceEEEecccce------ecccCCcceeccccCCCCCCCC-------ccCceEECCCCCEEeecc--------
Confidence 1 1 12234433221 1123446799999999999875 999999999999999984
Q ss_pred ccCCceEeecCccchhHHHHHHHHHHHH----hCCCCCHHH----HHHHHhccccccccCCCccccccchhhhhhccccC
Q 003469 587 FVGEGFALISGTSMAAPHIAGIAALVKQ----KHPYWSPAA----IKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTA 658 (817)
Q Consensus 587 ~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~ls~~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~ 658 (817)
++.|..|||||||||||||+||||+| .||+|+|+| ||++||+||+++...+ ....+
T Consensus 397 --~~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~--------------~~~~~ 460 (926)
T 1xf1_A 397 --NNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDED--------------EKAYF 460 (926)
T ss_dssp --CSSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG--------------GTEEC
T ss_pred --CCcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC--------------CCccC
Confidence 45899999999999999999999965 599999997 9999999999875432 12346
Q ss_pred CCCcccccccCcccccCCCeeeecCchhhhhccccCCCCCceeeecccCcccCCCCCCCCcCCCCcEEEeeecceEEEEE
Q 003469 659 TPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTPGIDIHEIRNYTNQPCNYSMGHPYNFNTPSITVAHLVKTQVVTR 738 (817)
Q Consensus 659 ~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~ 738 (817)
++++||+|+||+.+|+++.+ |+|..++ +-+++.+.++..+.+++|
T Consensus 461 ~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~------------------------~~~~i~l~~~~~~~~~~~ 505 (926)
T 1xf1_A 461 SPRQQGAGAVDAKKASAATM-----------YVTDKDN------------------------TSSKVHLNNVSDKFEVTV 505 (926)
T ss_dssp CHHHHTTCBCCHHHHHHCSE-----------EEEESSS------------------------SCSCEEEEEECSEEEEEE
T ss_pred ChhccCCCccCHHHhcCCCe-----------EEEcCCC------------------------CcceeeccccCccEEEEE
Confidence 77899999999999999865 4565432 112455555666778999
Q ss_pred EEEEcCCC---ceEEEEEEc--CCCcEEEEe--------cCeEEEcCCCEEEEEEEEEEec---------CCCceEEEEE
Q 003469 739 TVTNVAEE---ETYSMSARM--QPAIAIEVN--------PPAMTLKPGASRKFTVTLTVRS---------VTGTYSFGEI 796 (817)
Q Consensus 739 tv~n~~~~---~ty~~~~~~--~~~~~v~~~--------~~~~tv~~g~~~~~~v~~~~~~---------~~~~~~~G~i 796 (817)
||+|+++. .+|++.+.. +.+..+++. +.+|||+||++++|+|+|+++. ..+.+++|+|
T Consensus 506 tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i 585 (926)
T 1xf1_A 506 NVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFV 585 (926)
T ss_dssp EEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEE
T ss_pred EEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEE
Confidence 99999985 466666543 445555543 4579999999999999999862 2446899999
Q ss_pred EEEeCC-C-cEEEEeEEEEe
Q 003469 797 CMKGSR-G-HKVNIPVIAQG 814 (817)
Q Consensus 797 ~~~~~~-~-~~l~iP~~~~~ 814 (817)
+|++++ . +.||+||+++.
T Consensus 586 ~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 586 RFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEESSTTSCCCEEEEEEEEE
T ss_pred EEEeCCCCCCEEEeeeEEEe
Confidence 999643 3 45999999864
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.5e-60 Score=547.95 Aligned_cols=338 Identities=32% Similarity=0.531 Sum_probs=273.3
Q ss_pred ceEEEEeccccceEEEEcCHHHHHHH-----------HcCCCceEEEccceeccccCC-----CCcccCCCCCCCCCCCC
Q 003469 86 YKKLYSYKHLINGFAVHITPDQAEIL-----------QRAPGVKSVERDWKVRRLTTH-----TPEFLGLPTGVWPTGGG 149 (817)
Q Consensus 86 ~~~~~~y~~~~ng~sv~~~~~~~~~L-----------~~~p~V~~V~~~~~~~~~~~~-----s~~~~g~~~~~w~~~~~ 149 (817)
.+++++|. .|+||+++++++++++| +++|+|++|++++.+++.... ....+++ ..+|..
T Consensus 60 ~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~--- 134 (539)
T 3afg_A 60 AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMA-TNMWNL--- 134 (539)
T ss_dssp CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBC-SCCBCC---
T ss_pred CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCc-HhHHhc---
Confidence 57788886 79999999999999999 889999999999998765322 1122332 356765
Q ss_pred CCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCCCC
Q 003469 150 FDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFA 229 (817)
Q Consensus 150 ~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~ 229 (817)
+++|+||+|||||||||++||+|.++ +++.++|.++ ..
T Consensus 135 -g~~G~gv~VaViDtGid~~Hpdl~~~-----------------------------i~~~~d~~~~------------~~ 172 (539)
T 3afg_A 135 -GYDGSGITIGIIDTGIDASHPDLQGK-----------------------------VIGWVDFVNG------------KT 172 (539)
T ss_dssp -SCCCTTCEEEEEESBCCTTSGGGTTT-----------------------------EEEEEETTTC------------CS
T ss_pred -CCCCCCcEEEEEecCCCCCChHHhCC-----------------------------EeeeEECCCC------------CC
Confidence 68999999999999999999999864 5666676542 23
Q ss_pred CCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHc----CCcEEE
Q 003469 230 SPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD----GVDILS 305 (817)
Q Consensus 230 ~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~----g~dVIn 305 (817)
.+.|++||||||||||||+.... .+.+.||||+|+|+++|++++.+.++.+++++||+||+++ |++|||
T Consensus 173 ~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin 245 (539)
T 3afg_A 173 TPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVIN 245 (539)
T ss_dssp SCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEE
Confidence 56789999999999999974321 1346899999999999999987667889999999999975 999999
Q ss_pred ecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCC--CccCCCCcEEEEeeeecCcceeeEEEeCCCcE
Q 003469 306 LSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK--TLVSYSPWITTVAAAIDDRRYKNHLNLGNGKI 383 (817)
Q Consensus 306 ~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~--~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~ 383 (817)
||||..... ...+.+..+++++.++|++||+||||+|.... ..++..+++|+|||++.
T Consensus 246 ~SlG~~~~~-----~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~--------------- 305 (539)
T 3afg_A 246 LSLGSSQSS-----DGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK--------------- 305 (539)
T ss_dssp ECCCCCSCC-----CSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT---------------
T ss_pred eCCCCCCCC-----ccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC---------------
Confidence 999986431 24578999999999999999999999998643 45678899999998531
Q ss_pred EEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHHHhcC
Q 003469 384 LAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLG 463 (817)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~G 463 (817)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCCcccc
Q 003469 464 AAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVAL 543 (817)
Q Consensus 464 a~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 543 (817)
.+.++.
T Consensus 306 --------------------------------------------------------------------------~~~~a~ 311 (539)
T 3afg_A 306 --------------------------------------------------------------------------YDVITD 311 (539)
T ss_dssp --------------------------------------------------------------------------TSCBCS
T ss_pred --------------------------------------------------------------------------Cccccc
Confidence 126889
Q ss_pred ccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCCCCHHH
Q 003469 544 FSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAA 623 (817)
Q Consensus 544 fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~ 623 (817)
||||||+.++ ++||||+|||++|+++++..... .......|..++|||||||||||++|||+|++|+|++++
T Consensus 312 fSs~Gp~~~~-------~~kpdi~APG~~I~s~~~~~~~~-~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~ 383 (539)
T 3afg_A 312 FSSRGPTADN-------RLKPEVVAPGNWIIAARASGTSM-GQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDK 383 (539)
T ss_dssp SSCCCCCTTC-------BCCCSEEEECSSEEEECCTTCCC-SEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred ccCCCCCCCC-------CCcccEecCcCCEEeeccCCCCC-CCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 9999999876 99999999999999998643210 001123699999999999999999999999999999999
Q ss_pred HHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCCC
Q 003469 624 IKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPG 677 (817)
Q Consensus 624 ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 677 (817)
||++|++||+++...+ .+++.||+|+||+.+|++..
T Consensus 384 vk~~L~~tA~~~~~~~------------------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 384 VKTALIETADIVKPDE------------------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHSBCSSGGG------------------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHhhCccCCCCC------------------CCccCccCCccCHHHHhhhc
Confidence 9999999999875321 23468999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=3.1e-58 Score=512.62 Aligned_cols=320 Identities=25% Similarity=0.403 Sum_probs=261.2
Q ss_pred CceEEEEeccccceEEEEcCHHHHHHHHcCCCceEEEccceeccccCCC-----------CcccCC----CCCCCCCCCC
Q 003469 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHT-----------PEFLGL----PTGVWPTGGG 149 (817)
Q Consensus 85 ~~~~~~~y~~~~ng~sv~~~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s-----------~~~~g~----~~~~w~~~~~ 149 (817)
..+++++|. .+++|+++++++++++|+++|+|++|++++.++++.... ...|++ .+.+|..
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~--- 98 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSI--- 98 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGT---
T ss_pred CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhh---
Confidence 467888887 599999999999999999999999999999887643211 011221 1256765
Q ss_pred CCCCCCc--eEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCC
Q 003469 150 FDRAGED--IVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVD 227 (817)
Q Consensus 150 ~~~tG~G--V~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~ 227 (817)
+ +|+| |+|||||||||++||+|.++ +..+++|..+... .+
T Consensus 99 -~-~G~g~~v~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~~~-------~~ 140 (395)
T 2z2z_A 99 -T-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------------IAWCVSTLRGKVS-------TK 140 (395)
T ss_dssp -C-SSCCTTCEEEEEESCBCTTCTTTGGG-----------------------------EEEEEECGGGCCB-------CC
T ss_pred -c-CCCCCcEEEEEEcCCCCCCChhHhhc-----------------------------cccCccccCCccc-------CC
Confidence 4 9999 99999999999999999964 4445555433100 00
Q ss_pred CCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHc--------
Q 003469 228 FASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD-------- 299 (817)
Q Consensus 228 ~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~-------- 299 (817)
..++.|++||||||||||+|..+ + .++.||||+|+|+.+|++++.+.+..+++++||+||+++
T Consensus 141 ~~~~~d~~gHGT~vAgiia~~~n------~---~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~ 211 (395)
T 2z2z_A 141 LRDCADQNGHGTHVIGTIAALNN------D---IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKD 211 (395)
T ss_dssp HHHHBCSSSHHHHHHHHHHCCCS------S---SSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTT
T ss_pred CCCCCCCCCCHHHHHHHHHeecC------C---CceEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCcccccccc
Confidence 01245789999999999999732 1 136899999999999999887667889999999999998
Q ss_pred ------------CCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeee
Q 003469 300 ------------GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAI 367 (817)
Q Consensus 300 ------------g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~ 367 (817)
+++|||||||.... ...+..+++++.++|++||+||||+|.....+|+..+++|+|||++
T Consensus 212 ~~~~~~~~~~~~~~~Vin~S~G~~~~--------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~ 283 (395)
T 2z2z_A 212 GDGIIAGDPDDDAAEVISMSLGGPAD--------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAID 283 (395)
T ss_dssp CSSCCTTCTTSCCCSEEEECEEBSCC--------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC
T ss_pred ccccccccccCCCCeEEEecCCCCCC--------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEec
Confidence 99999999997432 3468889999999999999999999988778888999999999853
Q ss_pred cCcceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEeccccccc
Q 003469 368 DDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVT 447 (817)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~ 447 (817)
.
T Consensus 284 ~------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 284 S------------------------------------------------------------------------------- 284 (395)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred CcchHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEec
Q 003469 448 GTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIG 527 (817)
Q Consensus 448 g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (817)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHH
Q 003469 528 DGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAG 607 (817)
Q Consensus 528 ~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG 607 (817)
.+.++.||+||| +|+|||++|+|+++ ++.|..++|||||||||||
T Consensus 285 ----------~~~~a~fS~~G~---------------~v~APG~~i~s~~~----------~~~y~~~sGTS~AaP~VaG 329 (395)
T 2z2z_A 285 ----------NDNIASFSNRQP---------------EVSAPGVDILSTYP----------DDSYETLMGTAMATPHVSG 329 (395)
T ss_dssp ----------TSCBCTTSCSSC---------------SEEEECSSEEEEET----------TTEEEEEESHHHHHHHHHH
T ss_pred ----------CCCCCcccCCCC---------------CEEeCCCCeeeecC----------CCceEecCCHHHHHHHHHH
Confidence 126789999998 56999999999984 4689999999999999999
Q ss_pred HHHHHHHhCC-------------CCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCccccc
Q 003469 608 IAALVKQKHP-------------YWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAAL 674 (817)
Q Consensus 608 ~aALl~q~~p-------------~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al 674 (817)
++|||+|++| .|++.+||++|++||+++...+ .++.||+|+||+.+|+
T Consensus 330 ~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g-------------------~~~~~G~G~vd~~~A~ 390 (395)
T 2z2z_A 330 VVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG-------------------WDADYGYGVVRAALAV 390 (395)
T ss_dssp HHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS-------------------SBTTTBTCBCCHHHHH
T ss_pred HHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC-------------------CCCCccCceeCHHHHH
Confidence 9999999999 9999999999999999875433 2358999999999998
Q ss_pred CC
Q 003469 675 DP 676 (817)
Q Consensus 675 ~~ 676 (817)
+.
T Consensus 391 ~~ 392 (395)
T 2z2z_A 391 QA 392 (395)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=2.6e-55 Score=501.93 Aligned_cols=337 Identities=20% Similarity=0.245 Sum_probs=259.4
Q ss_pred CceEEEEeccccceEEEEcCHHHHHHHHc-CCCceEEEccceeccccCCCCc----------ccC-----CCCCCCCCCC
Q 003469 85 TYKKLYSYKHLINGFAVHITPDQAEILQR-APGVKSVERDWKVRRLTTHTPE----------FLG-----LPTGVWPTGG 148 (817)
Q Consensus 85 ~~~~~~~y~~~~ng~sv~~~~~~~~~L~~-~p~V~~V~~~~~~~~~~~~s~~----------~~g-----~~~~~w~~~~ 148 (817)
..+++++|. .|++|+++++++++++|++ +|+|++|++++.+++....... .|+ ....+|..
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~-- 141 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDD-- 141 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGG--
T ss_pred CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhc--
Confidence 467788885 5999999999999999999 9999999999888775432211 111 12235554
Q ss_pred CCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCCC
Q 003469 149 GFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDF 228 (817)
Q Consensus 149 ~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~ 228 (817)
+++|+||+|||||||||++||+|.++. |.+.. .++....|... ..+...+.
T Consensus 142 --~~~G~gv~VaViDtGid~~Hp~~~~~~---------~~~~~-------------~~~~~~~~~~~-----~~~~~~~~ 192 (471)
T 3t41_A 142 --LPKHANTKIAIIDTGVMKNHDDLKNNF---------STDSK-------------NLVPLNGFRGT-----EPEETGDV 192 (471)
T ss_dssp --CCSSCCCCEEEEESCCCTTCTTTTTTB---------CTTCE-------------ECCCTTCGGGC-----CTTCCCCT
T ss_pred --cCCCCCcEEEEEeCCCCCCChhHhcCc---------ccCCc-------------ccccCCCccCC-----CcccCCCC
Confidence 689999999999999999999999862 21100 01111111110 00111223
Q ss_pred CCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 003469 229 ASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSV 308 (817)
Q Consensus 229 ~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~dVIn~Sl 308 (817)
..+.|++||||||||||+|++ .+.||||+|+|+++|++++ +.+..+++++||+||+++|++||||||
T Consensus 193 ~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~-~~~~~~~i~~ai~~a~~~g~~Vin~S~ 259 (471)
T 3t41_A 193 HDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGS-KKTELLWVSKAIVQAANDGNQVINISV 259 (471)
T ss_dssp TCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSS-SCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccC-CCCcHHHHHHHHHHHHhCCCCEEEeCC
Confidence 356789999999999999874 2589999999999999987 467888999999999999999999999
Q ss_pred CCCCCCC----CCc----cCCCChHHHHHHHHHHcCceEEEecCCCCCCCCC------------------ccCCCCcEEE
Q 003469 309 GPNSPPA----TTK----TTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKT------------------LVSYSPWITT 362 (817)
Q Consensus 309 G~~~~~~----~~~----~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~------------------~~~~~~~vit 362 (817)
|...... ... ....+.+..+++.+.++|++||+||||+|..... .|+.++++|+
T Consensus 260 G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vit 339 (471)
T 3t41_A 260 GSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVT 339 (471)
T ss_dssp CEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEE
T ss_pred CCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEE
Confidence 9732100 000 1233578889999999999999999999986432 5667888888
Q ss_pred EeeeecCcceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecc
Q 003469 363 VAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYS 442 (817)
Q Consensus 363 VgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~ 442 (817)
|||++.
T Consensus 340 VgA~~~-------------------------------------------------------------------------- 345 (471)
T 3t41_A 340 VGSTDQ-------------------------------------------------------------------------- 345 (471)
T ss_dssp EEEECT--------------------------------------------------------------------------
T ss_pred EEeeCC--------------------------------------------------------------------------
Confidence 888531
Q ss_pred cccccCcchHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeee
Q 003469 443 FNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKG 522 (817)
Q Consensus 443 ~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 522 (817)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEecCCCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCc----------------------EEEeeCCC
Q 003469 523 TGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSL----------------------IWAAWSPN 580 (817)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~----------------------I~Sa~~~~ 580 (817)
.+.+++||+|||+. |||+|||++ |++++
T Consensus 346 ---------------~~~~a~fS~~G~~~------------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~--- 395 (471)
T 3t41_A 346 ---------------KSNLSEFSNFGMNY------------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTA--- 395 (471)
T ss_dssp ---------------TSSBCTTCCBCTTT------------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEEC---
T ss_pred ---------------CCCCCCccCCCCCC------------CeEEecCCCcccccccccccccccccccCceeEecC---
Confidence 12688999999963 499999987 88887
Q ss_pred CCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCC-CCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCC
Q 003469 581 GTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHP-YWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTAT 659 (817)
Q Consensus 581 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~ 659 (817)
.++.|..++|||||||||||++|||+|++| +++|++||++|++||++... .+
T Consensus 396 -------~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~--------------------~~ 448 (471)
T 3t41_A 396 -------NNGRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN--------------------KP 448 (471)
T ss_dssp -------TTSSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC--------------------CC
T ss_pred -------CCCCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC--------------------CC
Confidence 456899999999999999999999999999 89999999999999997642 23
Q ss_pred CCcccccccCcccccCCC
Q 003469 660 PFDYGSGHVNPRAALDPG 677 (817)
Q Consensus 660 ~~~~G~G~vn~~~Al~~~ 677 (817)
+..||+|+||+.+|++..
T Consensus 449 ~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 449 FSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHTTCBBCHHHHTTTT
T ss_pred cCccccChhCHHHHHHHH
Confidence 358999999999999853
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.5e-56 Score=515.98 Aligned_cols=301 Identities=23% Similarity=0.266 Sum_probs=40.9
Q ss_pred CceEEEEeccccceEEEEcCHHHHHHHHcCCCceEEEccceeccccCCCCcccCCCC--------CCCCCCCCCCCCCCc
Q 003469 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPT--------GVWPTGGGFDRAGED 156 (817)
Q Consensus 85 ~~~~~~~y~~~~ng~sv~~~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s~~~~g~~~--------~~w~~~~~~~~tG~G 156 (817)
..++.+.|.++|+||+++++++++++|+++|+|++||+++.+..+. .. |++.. ..|.. +++|+|
T Consensus 108 ~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~~-~p---WgL~~i~~~~~~~~~w~~----~~~G~G 179 (692)
T 2p4e_P 108 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQS-IP---WNLERITPPRYRADEYQP----PDGGSL 179 (692)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC-----------------------------------
T ss_pred ccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccCC-CC---cchhhccccccccccccc----CCCCCC
Confidence 4578899999999999999999999999999999999999876521 11 33321 23443 579999
Q ss_pred eEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCCCCCCCCCCC
Q 003469 157 IVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDG 236 (817)
Q Consensus 157 V~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~~~D~~g 236 (817)
|+|||||||||++||+|.++.. |. ++++..+. +.......+.|++|
T Consensus 180 V~VaVIDTGId~~HpdL~gr~~--------~~--------------------~~~~~~d~------dg~~~~~~~~D~~G 225 (692)
T 2p4e_P 180 VEVYLLDTSIQSDHREIEGRVM--------VT--------------------DFENVPEE------DGTRFHRQASKCDS 225 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEcCCCCCCChhhcCceE--------ec--------------------ccccccCC------CCCcccCCCCCCCC
Confidence 9999999999999999998620 10 00110000 00000124568999
Q ss_pred CCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHc------CCcEEEecCCC
Q 003469 237 HGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD------GVDILSLSVGP 310 (817)
Q Consensus 237 HGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~------g~dVIn~SlG~ 310 (817)
|||||||||+|+. .||||+|+|+++||+++.+.++.+++++||+|++++ |++|||||||+
T Consensus 226 HGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg 291 (692)
T 2p4e_P 226 HGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAG 291 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCC
Confidence 9999999999962 699999999999999987678889999999999986 89999999996
Q ss_pred CCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCC-ccCCCCcEEEEeeeecCcceeeEEEeCCCcEEEeeec
Q 003469 311 NSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKT-LVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGL 389 (817)
Q Consensus 311 ~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~ 389 (817)
. +...+..+++++.++|++||+||||+|.+... .|+..+++|+|||++.+...
T Consensus 292 ~---------~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~----------------- 345 (692)
T 2p4e_P 292 G---------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP----------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C---------CcHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc-----------------
Confidence 3 23467788888999999999999999987543 47788999999986421100
Q ss_pred CCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHHHhcCceEEEE
Q 003469 390 SPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVL 469 (817)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~ 469 (817)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCCccccccCCCC
Q 003469 470 AVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGP 549 (817)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~Gp 549 (817)
...-+.||+|||
T Consensus 346 --------------------------------------------------------------------a~~ss~fSn~G~ 357 (692)
T 2p4e_P 346 --------------------------------------------------------------------VTLGTLGTNFGR 357 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------cccccccCCCCC
Confidence 000123889987
Q ss_pred CCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCCCCHHHHHHHHh
Q 003469 550 NIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALM 629 (817)
Q Consensus 550 ~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~ik~~L~ 629 (817)
.+ ||+|||++|+|+++.. ++.|..++|||||||||||++|||+|++|+|+|+|||++|+
T Consensus 358 ~v-------------DI~APG~~I~St~~~~--------~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~ 416 (692)
T 2p4e_P 358 CV-------------DLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLI 416 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ce-------------eEEecCCcEEeeccCC--------CCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 54 9999999999998542 35789999999999999999999999999999999999999
Q ss_pred ccccccc
Q 003469 630 TTTTKLD 636 (817)
Q Consensus 630 ~TA~~~~ 636 (817)
+||.+..
T Consensus 417 ~tA~~~~ 423 (692)
T 2p4e_P 417 HFSAKDV 423 (692)
T ss_dssp -------
T ss_pred Hhccccc
Confidence 9998753
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.6e-54 Score=502.92 Aligned_cols=340 Identities=24% Similarity=0.298 Sum_probs=253.5
Q ss_pred ceEEEEeccccceEEEEcCH---H-HHHHHHc--CCCceEEEccceecccc----CCCC---------------------
Q 003469 86 YKKLYSYKHLINGFAVHITP---D-QAEILQR--APGVKSVERDWKVRRLT----THTP--------------------- 134 (817)
Q Consensus 86 ~~~~~~y~~~~ng~sv~~~~---~-~~~~L~~--~p~V~~V~~~~~~~~~~----~~s~--------------------- 134 (817)
.++++++. .+++++++++. + .+++|++ +|+|++|||+..+++.. ...+
T Consensus 53 ~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (671)
T 1r6v_A 53 GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL 131 (671)
T ss_dssp CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccc
Confidence 45666664 68999999875 3 3466764 89999999997765431 0000
Q ss_pred --cc-----cCCCCCC-CCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCce
Q 003469 135 --EF-----LGLPTGV-WPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKI 206 (817)
Q Consensus 135 --~~-----~g~~~~~-w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki 206 (817)
.. ++++ .+ |.. ++|+||+|||||||||++||+|.++. +
T Consensus 132 ~~~~W~l~~I~~~-~a~w~~-----~tG~gV~VAVIDTGVd~~HpdL~~~~---------~------------------- 177 (671)
T 1r6v_A 132 SNELWGLEAIGVT-QQLWEE-----ASGTNIIVAVVDTGVDGTHPDLEGQV---------I------------------- 177 (671)
T ss_dssp GGGCHHHHHTTCC-HHHHHH-----CSCTTCEEEEEESCCBTTSGGGTTTB---------C-------------------
T ss_pred cccCCchhccCCc-hhhhhc-----cCCCCCEEEEEeCCCCCCCccccccE---------E-------------------
Confidence 01 1111 23 544 69999999999999999999999761 1
Q ss_pred eeeeehhHHHHhhccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecC----C
Q 003469 207 IGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRL----F 282 (817)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~----~ 282 (817)
.++++..+. ..+ ...+..|++||||||||||||+.+ + .++.||||+|+|+++|+++.. +
T Consensus 178 -~g~~~~~~~-----~~p--~~~d~~d~~gHGThVAGiIAa~~n------g---~gv~GVAP~A~I~~vkv~~~~~~~~g 240 (671)
T 1r6v_A 178 -AGYRPAFDE-----ELP--AGTDSSYGGSAGTHVAGTIAAKKD------G---KGIVGVAPGAKIMPIVIFDDPALVGG 240 (671)
T ss_dssp -CEEEGGGTE-----EEC--TTCBCCTTCSHHHHHHHHHHCCCS------S---SSCCCSCTTSEEEEEESBCCHHHHCT
T ss_pred -ecccccCCC-----cCC--CCCCCccCCCcchhhhhhhhccCC------C---CceEEECCCCEEEEEEeccCccccCC
Confidence 111111100 000 112344678999999999999742 1 146899999999999999761 2
Q ss_pred C--CCHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCC-CCccCCCCc
Q 003469 283 G--GFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP-KTLVSYSPW 359 (817)
Q Consensus 283 ~--~~~~di~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-~~~~~~~~~ 359 (817)
. ...+.+++||+||+++|++|||||||... +...+..++++|.++|++||+||||+|... ..+|+..++
T Consensus 241 ~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~--------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~ 312 (671)
T 1r6v_A 241 NGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG--------YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPG 312 (671)
T ss_dssp TSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC--------CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTT
T ss_pred CCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC--------CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCC
Confidence 2 23566899999999999999999999742 345788999999999999999999999875 567788999
Q ss_pred EEEEeeeecCcceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEE
Q 003469 360 ITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLC 439 (817)
Q Consensus 360 vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~ 439 (817)
+|+|||++.+..
T Consensus 313 VItVgA~d~~g~-------------------------------------------------------------------- 324 (671)
T 1r6v_A 313 VIQVAALDYYGG-------------------------------------------------------------------- 324 (671)
T ss_dssp CEEEEEEEEETT--------------------------------------------------------------------
T ss_pred eEEEEEEcCCCC--------------------------------------------------------------------
Confidence 999999642110
Q ss_pred ecccccccCcchHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEe
Q 003469 440 GYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKS 519 (817)
Q Consensus 440 ~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~ 519 (817)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeeEecCCCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCC--------CCccCCc
Q 003469 520 FKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDE--------ANFVGEG 591 (817)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~--------~~~~~~~ 591 (817)
...+++||++||.. ||+|||++|+|+++...... ....++.
T Consensus 325 ------------------~~~~a~fSn~G~~v-------------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~ 373 (671)
T 1r6v_A 325 ------------------TFRVAGFSSRSDGV-------------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGT 373 (671)
T ss_dssp ------------------EEEECSSSCCCTTE-------------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCC
T ss_pred ------------------ceeeccccCCCCCe-------------eEEecCCCEEeecCCCCccccccccccccccCCCc
Confidence 00578999999976 99999999999987532110 0112458
Q ss_pred eEeecCccchhHHHHHHHHHHHHhCCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcc
Q 003469 592 FALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPR 671 (817)
Q Consensus 592 y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~ 671 (817)
|..++|||||||||||++|||+|++|+|++.+||++|++||+++...+. +..||+|+||+.
T Consensus 374 y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g~-------------------d~~~G~G~vna~ 434 (671)
T 1r6v_A 374 YDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGW-------------------DHDTGYGLVKLD 434 (671)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSSC-------------------BTTTBTCBCCHH
T ss_pred eEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCCC-------------------CCCcccceeCHH
Confidence 9999999999999999999999999999999999999999998764432 347999999999
Q ss_pred cccCCCeeeecC
Q 003469 672 AALDPGLIFDAG 683 (817)
Q Consensus 672 ~Al~~~lv~~~~ 683 (817)
+|++..+..+..
T Consensus 435 ~Al~~~l~~~~~ 446 (671)
T 1r6v_A 435 AALQGPLPTQGG 446 (671)
T ss_dssp HHHHCCCCSSSE
T ss_pred HHhhhhcCCCCC
Confidence 999877655443
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.8e-52 Score=472.98 Aligned_cols=386 Identities=21% Similarity=0.279 Sum_probs=271.3
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +|+||+|||||||||++||+|.++ ++.++++..
T Consensus 15 ~~w~~------~g~gv~VaViDtGvd~~Hp~l~~~-----------------------------~~~~~~~~~------- 52 (441)
T 1y9z_A 15 VLSDS------QAGNRTICIIDSGYDRSHNDLNAN-----------------------------NVTGTNNSG------- 52 (441)
T ss_dssp SSCCT------TGGGCEEEEEESCCCTTSTTTTTS-----------------------------EEEECCCTT-------
T ss_pred hhhhc------CCCCcEEEEEcCCCCCCChhHhcC-----------------------------cccCcccCC-------
Confidence 57765 577999999999999999999975 111222211
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCC--cEEEEEeeecCCCCCHHHHHHHHHHHHHc
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRA--RIAVYKALYRLFGGFVADVVAAIDQAVHD 299 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A--~L~~~kv~~~~~~~~~~di~~ai~~a~~~ 299 (817)
..++..+.|+.||||||||||+|..+. .++.||||+| +|+.+|+++..+.++.+++++||+||+++
T Consensus 53 ---~~~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~ 120 (441)
T 1y9z_A 53 ---TGNWYQPGNNNAHGTHVAGTIAAIANN---------EGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNS 120 (441)
T ss_dssp ---SCCTTCCCSSCCHHHHHHHHHHCCCSS---------SBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHT
T ss_pred ---CCCCCCCCCCCCcHHHHHHHHhcccCC---------CCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHh
Confidence 011235668899999999999997421 1468999995 89999999886557788999999999999
Q ss_pred -CCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeeecCcceeeEEEe
Q 003469 300 -GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNL 378 (817)
Q Consensus 300 -g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~ 378 (817)
|++|||||||.... ...+..+++++.++|++||+||||+|.....+|+..+++|+|||++.+.....+...
T Consensus 121 ~g~~Vin~S~G~~~~--------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~ 192 (441)
T 1y9z_A 121 GGANVVTMSLGGSGS--------TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQY 192 (441)
T ss_dssp TCCSEEEECCCBSCC--------BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCC
T ss_pred cCCcEEEeCCCCCCC--------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccC
Confidence 99999999997532 246778999999999999999999998877888899999999999877543322222
Q ss_pred CCCcEEEe-----------------------eecCCCCC-C-CceEE--EEEcccccccccccccCCCCCCCc-cccccc
Q 003469 379 GNGKILAG-----------------------IGLSPATH-G-NRTFT--LVAANDVLLDSSVMKYSASDCQRP-EVLNKN 430 (817)
Q Consensus 379 ~~~~~~~~-----------------------~~~~~~~~-~-~~~~~--~~~~~~~~~~~~~~~~~~~~c~~~-~~~~~~ 430 (817)
+....+.. .+++.... + ...++ +.+..+... .........|... ..++..
T Consensus 193 g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~--g~~~~~~~~C~~~~~~~~~~ 270 (441)
T 1y9z_A 193 TDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPIN--ASATGALAECTVNGTSFSCG 270 (441)
T ss_dssp CTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCC--CEEEEEEEEEEEETTEEECC
T ss_pred CCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccc--cccccchhccccccccccCC
Confidence 22111111 11100000 0 00000 000000000 0001112346532 356778
Q ss_pred cccccEEEEecccccccCcchHHHHHHHHHhcCceEEEEeecCCCCCCc-----cCCCCCCCCeEEEcCchhHHHHHHHH
Q 003469 431 LVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTK-----FDPVPVGIPGILITDVTKSMDLVDYY 505 (817)
Q Consensus 431 ~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~-----~~~~~~~~p~~~i~~~~~g~~l~~~~ 505 (817)
+++|||++|+|+... .....+.++..+++++|+.++|+|++....+.. .......+|.+.+.. ++|+.+..++
T Consensus 271 ~~~gkivl~~rg~~~-~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~-~~g~~l~~~~ 348 (441)
T 1y9z_A 271 NMANKICLVERVGNQ-GSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDR-ATGLALKAKL 348 (441)
T ss_dssp CCTTEEEEEECCSCS-SSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECH-HHHHHHHTTT
T ss_pred CccccEEEEeccccC-cccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeH-HHHHHHHHHh
Confidence 899999999985221 112356788999999999999999987554421 122345788888876 7888776544
Q ss_pred hccCCcCCcceeEeeeeeeEecCCCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCC
Q 003469 506 NTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEA 585 (817)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~ 585 (817)
.+ .+. +++.
T Consensus 349 ~~---------------------------------------------------------~~t------~~~~-------- 357 (441)
T 1y9z_A 349 GQ---------------------------------------------------------STT------VSNQ-------- 357 (441)
T ss_dssp TS---------------------------------------------------------EEE------EEEE--------
T ss_pred cC---------------------------------------------------------Ccc------cccc--------
Confidence 21 000 0111
Q ss_pred CccCCceEeecCccchhHHHHHHHHHHHHhCCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccc
Q 003469 586 NFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGS 665 (817)
Q Consensus 586 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~ 665 (817)
.++.|..+||||||||||||++|||+|+||+|+|++||++||+||++++..+. +++||+
T Consensus 358 --~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~-------------------~~~~G~ 416 (441)
T 1y9z_A 358 --GNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAGR-------------------DNQTGY 416 (441)
T ss_dssp --EEESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSSC-------------------BTTTBT
T ss_pred --cCCCceeecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCCC-------------------cccccc
Confidence 34589999999999999999999999999999999999999999998865432 357999
Q ss_pred cccCcccccCCCeeeecCchhhhhccccCCC
Q 003469 666 GHVNPRAALDPGLIFDAGYEDYLGFLCTTPG 696 (817)
Q Consensus 666 G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~~ 696 (817)
|+||+.+|+ ||+.|+|..+.
T Consensus 417 G~vn~~~A~-----------~~~~~lc~~~~ 436 (441)
T 1y9z_A 417 GMINAVAAK-----------AYLDESCTGPT 436 (441)
T ss_dssp CBCCHHHHH-----------HHHHHCTTCC-
T ss_pred cccCHHHHH-----------HHHHhhhcCCC
Confidence 999999995 68899998764
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=8.9e-52 Score=438.64 Aligned_cols=258 Identities=29% Similarity=0.437 Sum_probs=211.4
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +..|+||+|||||||||++||+|.++ ++.+++|.+.
T Consensus 22 ~aw~~----~~g~~gv~VaViDtGvd~~hp~l~~~-----------------------------~~~~~~~~~~------ 62 (280)
T 1dbi_A 22 YAWDV----TKGSSGQEIAVIDTGVDYTHPDLDGK-----------------------------VIKGYDFVDN------ 62 (280)
T ss_dssp HHTTT----CCCCTTCEEEEEESCCCTTSTTTTTT-----------------------------EEEEEETTTT------
T ss_pred HHHhh----cCCCCCCEEEEEeCCcCCCChhhccC-----------------------------cccceeccCC------
Confidence 57877 45667999999999999999999964 5556666542
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCC
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~ 301 (817)
..++.|..||||||||||+|...+. ..+.||||+|+|+.+|+++..+.+..+++++||+||+++|+
T Consensus 63 ------~~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~ 128 (280)
T 1dbi_A 63 ------DYDPMDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGA 128 (280)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCcHHHHHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCC
Confidence 1345688999999999999975321 13689999999999999988767888999999999999999
Q ss_pred cEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeeecCcceeeEEEeCCC
Q 003469 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNG 381 (817)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~~~~ 381 (817)
+|||||||... ....+..+++++.++|++||+||||+|......|+..+++|+|||++.
T Consensus 129 ~Vin~S~G~~~--------~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 187 (280)
T 1dbi_A 129 EVINLSLGCDC--------HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ------------- 187 (280)
T ss_dssp SEEEECCSSCC--------CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-------------
T ss_pred CEEEeCCCCCC--------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-------------
Confidence 99999999743 235788899999999999999999999877777888999999998531
Q ss_pred cEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHHHh
Q 003469 382 KILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKS 461 (817)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~ 461 (817)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCCcc
Q 003469 462 LGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQV 541 (817)
Q Consensus 462 ~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (817)
.+.+
T Consensus 188 ----------------------------------------------------------------------------~~~~ 191 (280)
T 1dbi_A 188 ----------------------------------------------------------------------------YDRL 191 (280)
T ss_dssp ----------------------------------------------------------------------------TSCB
T ss_pred ----------------------------------------------------------------------------CCCc
Confidence 1267
Q ss_pred ccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCCCCH
Q 003469 542 ALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSP 621 (817)
Q Consensus 542 a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~ 621 (817)
+.||++||.. ||+|||++|+++. .++.|..++|||||||||||++|||++ |++++
T Consensus 192 ~~~S~~G~~~-------------dv~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~ 246 (280)
T 1dbi_A 192 ASFSNYGTWV-------------DVVAPGVDIVSTI----------TGNRYAYMSGTSMASPHVAGLAALLAS--QGRNN 246 (280)
T ss_dssp CTTBCCSTTC-------------CEEEECSSEEEEE----------TTTEEEEECSHHHHHHHHHHHHHHHHH--TTCCH
T ss_pred CCCCCCCCCc-------------eEEEecCCeEeec----------CCCCEEEccCHHHHHHHHHHHHHHHHC--CCCCH
Confidence 8899999865 9999999999998 346899999999999999999999987 89999
Q ss_pred HHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccC
Q 003469 622 AAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALD 675 (817)
Q Consensus 622 ~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 675 (817)
.|||++|++||+++...+ ..||+|+||+.+|++
T Consensus 247 ~~v~~~L~~ta~~~~~~~---------------------~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 247 IEIRQAIEQTADKISGTG---------------------TYFKYGRINSYNAVT 279 (280)
T ss_dssp HHHHHHHHHTSBCCTTBT---------------------TTBSSEECCHHHHHT
T ss_pred HHHHHHHHHhCccCCCCC---------------------CcccCCEECHHHHhc
Confidence 999999999999875321 379999999999985
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.2e-51 Score=434.70 Aligned_cols=255 Identities=34% Similarity=0.495 Sum_probs=215.9
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||| .+||+|+. ..+++|..+
T Consensus 15 ~a~~~----g~~G~gv~VaViDtGi-~~h~~l~~-------------------------------~~~~~~~~~------ 52 (269)
T 1gci_A 15 AAHNR----GLTGSGVKVAVLDTGI-STHPDLNI-------------------------------RGGASFVPG------ 52 (269)
T ss_dssp HHHHT----TCSCTTCEEEEEESCC-CCCTTCCE-------------------------------EEEEECSTT------
T ss_pred HHHhc----CCCCCCCEEEEECCCC-CCCHhhcc-------------------------------cCCcccCCC------
Confidence 46665 6899999999999999 89999952 233344321
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCC
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~ 301 (817)
...+.|+.||||||||||+|..+. ..+.||||+|+|+.+|+++..+.+..+++++||+||+++++
T Consensus 53 ------~~~~~d~~gHGT~vAgiia~~~~~---------~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 117 (269)
T 1gci_A 53 ------EPSTQDGNGHGTHVAGTIAALNNS---------IGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGM 117 (269)
T ss_dssp ------CCSCSCSSSHHHHHHHHHHCCCSS---------SBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCChHHHHHHHhcCcCC---------CCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCC
Confidence 123568899999999999997321 13689999999999999988767788899999999999999
Q ss_pred cEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeeecCcceeeEEEeCCC
Q 003469 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNG 381 (817)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~~~~ 381 (817)
+|||||||.... ...+..+++++.++|++||+||||+|.....+|+..+++|+|||++.
T Consensus 118 ~Vin~S~G~~~~--------~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 176 (269)
T 1gci_A 118 HVANLSLGSPSP--------SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------- 176 (269)
T ss_dssp SEEEECCCBSSC--------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------
T ss_pred eEEEeCCCCCCC--------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-------------
Confidence 999999997532 34788899999999999999999999887788888999999998531
Q ss_pred cEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHHHh
Q 003469 382 KILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKS 461 (817)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~ 461 (817)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCCcc
Q 003469 462 LGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQV 541 (817)
Q Consensus 462 ~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (817)
.+.+
T Consensus 177 ----------------------------------------------------------------------------~~~~ 180 (269)
T 1gci_A 177 ----------------------------------------------------------------------------NNNR 180 (269)
T ss_dssp ----------------------------------------------------------------------------TSCB
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 1267
Q ss_pred ccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCCCCH
Q 003469 542 ALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSP 621 (817)
Q Consensus 542 a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~ 621 (817)
+.||++||.+ ||+|||++|++++ .++.|..++|||||||||||++|||+|++|+|++
T Consensus 181 ~~~S~~G~~~-------------di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~ 237 (269)
T 1gci_A 181 ASFSQYGAGL-------------DIVAPGVNVQSTY----------PGSTYASLNGTSMATPHVAGAAALVKQKNPSWSN 237 (269)
T ss_dssp CTTCCCSTTE-------------EEEEECSSEEEEE----------TTTEEEEECSHHHHHHHHHHHHHHHHHHCTTCCH
T ss_pred CCCCCCCCCc-------------ceEecCCCeEeec----------CCCCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 8899999875 9999999999998 3568999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccC
Q 003469 622 AAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALD 675 (817)
Q Consensus 622 ~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 675 (817)
.|||++|++||+++. +++.||+|+||+.+|++
T Consensus 238 ~~v~~~L~~tA~~~g----------------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 238 VQIRNHLKNTATSLG----------------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHHHHHHHHTSBCCS----------------------CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHHHhCccCC----------------------CCCCcccCccCHHHHcC
Confidence 999999999999874 12479999999999985
No 12
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=2.3e-51 Score=435.57 Aligned_cols=257 Identities=30% Similarity=0.467 Sum_probs=219.1
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. .+|+||+|||||||||++||+|.++ ++.+++|.++
T Consensus 22 ~aw~~-----~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~------ 61 (279)
T 1thm_A 22 QAWDI-----AEGSGAKIAIVDTGVQSNHPDLAGK-----------------------------VVGGWDFVDN------ 61 (279)
T ss_dssp HHHTT-----CCCTTCEEEEEESCCCTTCTTTTTT-----------------------------EEEEEETTTT------
T ss_pred HHHhc-----CCCCCCEEEEEccCCCCCCcchhcC-----------------------------ccccccccCC------
Confidence 57776 4799999999999999999999964 5556666542
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCC
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~ 301 (817)
...+.|+.||||||||||+|...++ ..+.||||+|+|+.+|+++..+.+..+++++||+||+++|+
T Consensus 62 ------~~~~~d~~gHGT~vAgiia~~~~n~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~ 127 (279)
T 1thm_A 62 ------DSTPQNGNGHGTHCAGIAAAVTNNS--------TGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGA 127 (279)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCcHHHHHHHHhCccCCC--------CccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCC
Confidence 1345688999999999999975322 13689999999999999988767788899999999999999
Q ss_pred cEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeeecCcceeeEEEeCCC
Q 003469 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNG 381 (817)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~~~~ 381 (817)
+|||||||... ....+..+++++.++|++||+||||+|.....+|+..+++|+|||++.
T Consensus 128 ~Vin~S~G~~~--------~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 186 (279)
T 1thm_A 128 KVISLSLGGTV--------GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------- 186 (279)
T ss_dssp SEEEECCCBSS--------CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT-------------
T ss_pred CEEEEecCCCC--------CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC-------------
Confidence 99999999753 235788899999999999999999999887788888999999998531
Q ss_pred cEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHHHh
Q 003469 382 KILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKS 461 (817)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~ 461 (817)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCCcc
Q 003469 462 LGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQV 541 (817)
Q Consensus 462 ~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (817)
.+.+
T Consensus 187 ----------------------------------------------------------------------------~~~~ 190 (279)
T 1thm_A 187 ----------------------------------------------------------------------------NDNK 190 (279)
T ss_dssp ----------------------------------------------------------------------------TSCB
T ss_pred ----------------------------------------------------------------------------CCCc
Confidence 1267
Q ss_pred ccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCCCCH
Q 003469 542 ALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSP 621 (817)
Q Consensus 542 a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~ 621 (817)
+.||++||.+ ||+|||++|+++++ ++.|..++|||||||||||++||| ++|.+++
T Consensus 191 ~~fS~~G~~~-------------dv~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~ 245 (279)
T 1thm_A 191 SSFSTYGSWV-------------DVAAPGSSIYSTYP----------TSTYASLSGTSMATPHVAGVAGLL--ASQGRSA 245 (279)
T ss_dssp CTTCCCCTTC-------------CEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHH--HTTTCCH
T ss_pred CCcCCCCCce-------------EEEEcCCCeEEEeC----------CCCEEEcccHHHHHHHHHHHHHHH--HCCCcCH
Confidence 8899999865 99999999999983 468999999999999999999999 5899999
Q ss_pred HHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccC
Q 003469 622 AAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALD 675 (817)
Q Consensus 622 ~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 675 (817)
++||++|++||+++...+ ..||+|+||+.+|++
T Consensus 246 ~~v~~~L~~ta~~~~~~~---------------------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 246 SNIRAAIENTADKISGTG---------------------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp HHHHHHHHHTCBCCTTBT---------------------TTBSSEECCHHHHHH
T ss_pred HHHHHHHHHhCccCCCCC---------------------ccccCCeeCHHHHhc
Confidence 999999999999875432 378999999999974
No 13
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.7e-51 Score=435.29 Aligned_cols=256 Identities=30% Similarity=0.486 Sum_probs=213.6
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|+. ..+++|..+
T Consensus 15 ~~~~~----g~~G~gv~VaViDtGid~~h~~l~~-------------------------------~~g~~~~~~------ 53 (274)
T 1r0r_E 15 KVQAQ----GFKGANVKVAVLDTGIQASHPDLNV-------------------------------VGGASFVAG------ 53 (274)
T ss_dssp HHHHH----TCSCTTCEEEEEESCCCTTCTTCCE-------------------------------EEEEECSTT------
T ss_pred HHHhc----CCCCCCCEEEEEcCCCCCCCHhHcC-------------------------------CCCccccCC------
Confidence 45655 6899999999999999999999952 223344321
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCC
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~ 301 (817)
...+.|..||||||||||+|..+. ..+.||||+|+|+.+|++...+.+..+++++||+||+++++
T Consensus 54 ------~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~ 118 (274)
T 1r0r_E 54 ------EAYNTDGNGHGTHVAGTVAALDNT---------TGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGM 118 (274)
T ss_dssp ------CCTTCCSSSHHHHHHHHHHCCSSS---------SBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCCHHHHHHHHHccCCC---------CceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCC
Confidence 122457899999999999996421 14689999999999999988766788899999999999999
Q ss_pred cEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCC----CCccCCCCcEEEEeeeecCcceeeEEE
Q 003469 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP----KTLVSYSPWITTVAAAIDDRRYKNHLN 377 (817)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----~~~~~~~~~vitVgA~~~~~~~~~~~~ 377 (817)
+|||||||.... ...+..+++++.++|++||+||||+|... ..+|+..+++|+|||++.
T Consensus 119 ~Vin~S~G~~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--------- 181 (274)
T 1r0r_E 119 DVINMSLGGASG--------STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS--------- 181 (274)
T ss_dssp SEEEECEEBSSC--------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT---------
T ss_pred CEEEeCCCCCCC--------cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC---------
Confidence 999999997532 35788899999999999999999999763 345677889999998531
Q ss_pred eCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHH
Q 003469 378 LGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSE 457 (817)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~ 457 (817)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCC
Q 003469 458 TAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKS 537 (817)
Q Consensus 458 ~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (817)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCC
Q 003469 538 APQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHP 617 (817)
Q Consensus 538 ~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p 617 (817)
.+.++.||++||.+ ||+|||++|+++++ ++.|..++|||||||||||++|||+|++|
T Consensus 182 ~~~~~~~S~~G~~~-------------di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p 238 (274)
T 1r0r_E 182 NSNRASFSSVGAEL-------------EVMAPGAGVYSTYP----------TNTYATLNGTSMASPHVAGAAALILSKHP 238 (274)
T ss_dssp TSCBCTTCCCSTTE-------------EEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHHHST
T ss_pred CCCcCccCCCCCCc-------------eEEeCCCCeEeecC----------CCCEEEeccHHHHHHHHHHHHHHHHHHCC
Confidence 12678899999865 99999999999983 46899999999999999999999999999
Q ss_pred CCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccC
Q 003469 618 YWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALD 675 (817)
Q Consensus 618 ~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 675 (817)
+|+++|||++|++||+++. ++..||+|+||+.+|++
T Consensus 239 ~lt~~~v~~~L~~tA~~~g----------------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 239 NLSASQVRNRLSSTATYLG----------------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp TCCHHHHHHHHHHTCBCCS----------------------CHHHHTTCBCCHHHHTC
T ss_pred CCCHHHHHHHHHHhCcccC----------------------CCCCcccCccCHHHHhC
Confidence 9999999999999999864 12479999999999985
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=4.3e-51 Score=433.66 Aligned_cols=258 Identities=32% Similarity=0.489 Sum_probs=214.3
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|+. ..+++|..+
T Consensus 15 ~~~~~----g~~G~gv~VaViDtGid~~h~~l~~-------------------------------~~g~~~~~~------ 53 (281)
T 1to2_E 15 ALHSQ----GYTGSNVKVAVIDSGIDSSHPDLKV-------------------------------AGGASMVPS------ 53 (281)
T ss_dssp HHHHH----TCSCTTCEEEEEESCCCTTCTTCCE-------------------------------EEEEECCTT------
T ss_pred HHHhc----CCCCCCCEEEEEcCCCCCCCHHHcC-------------------------------cCCccccCC------
Confidence 45655 6899999999999999999999962 122333221
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCC
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~ 301 (817)
+..+..|..||||||||||+|..+. ..+.||||+|+|+.+|++...+.+..+++++||+|++++++
T Consensus 54 -----~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~ 119 (281)
T 1to2_E 54 -----ETNPFQDNNSHGTHVAGTVAALNNS---------IGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNM 119 (281)
T ss_dssp -----CCCTTCCSSSHHHHHHHHHHCCSSS---------SSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTC
T ss_pred -----CCCCCCCCCCcHHHHHHHHhccCCC---------CcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCC
Confidence 1112357899999999999997421 13689999999999999987766788899999999999999
Q ss_pred cEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCC----CCccCCCCcEEEEeeeecCcceeeEEE
Q 003469 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP----KTLVSYSPWITTVAAAIDDRRYKNHLN 377 (817)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----~~~~~~~~~vitVgA~~~~~~~~~~~~ 377 (817)
+|||||||.... ...+..+++++.++|++||+||||+|... ..+|+..+++|+|||++.
T Consensus 120 ~Vin~S~G~~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~--------- 182 (281)
T 1to2_E 120 DVINMSLGGPSG--------SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS--------- 182 (281)
T ss_dssp SEEEECEEBSCC--------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT---------
T ss_pred cEEEECCcCCCC--------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC---------
Confidence 999999997532 35788899999999999999999999763 345777899999998521
Q ss_pred eCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHH
Q 003469 378 LGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSE 457 (817)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~ 457 (817)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCC
Q 003469 458 TAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKS 537 (817)
Q Consensus 458 ~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (817)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCC
Q 003469 538 APQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHP 617 (817)
Q Consensus 538 ~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p 617 (817)
.+.++.||++||.+ ||+|||++|+++++ ++.|..++|||||||||||++|||+|++|
T Consensus 183 ~~~~~~fS~~G~~~-------------di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p 239 (281)
T 1to2_E 183 SNQRASFSSVGPEL-------------DVMAPGVSIQSTLP----------GNKYGAYNGTSMASPHVAGAAALILSKHP 239 (281)
T ss_dssp TSCBCTTCCCSTTC-------------CEEEECSSEEEEET----------TTEEEEECBHHHHHHHHHHHHHHHHHHST
T ss_pred CCCcCCcCCCCCCc-------------eEEecCCCeEeecC----------CCCEEecCcHHHHHHHHHHHHHHHHHhCC
Confidence 12678899999865 99999999999983 46899999999999999999999999999
Q ss_pred CCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCC
Q 003469 618 YWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDP 676 (817)
Q Consensus 618 ~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 676 (817)
+|+++|||++|++||+++. +++.||+|+||+.+|++.
T Consensus 240 ~lt~~~v~~~L~~tA~~~g----------------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 240 NWTNTQVRSSLENTTTKLG----------------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp TCCHHHHHHHHHTTCBCCS----------------------CHHHHTTCBCCHHHHTSS
T ss_pred CCCHHHHHHHHHhhCcccC----------------------CCCCcccceecHHHHhhh
Confidence 9999999999999999874 124799999999999975
No 15
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=6.2e-52 Score=441.58 Aligned_cols=266 Identities=23% Similarity=0.271 Sum_probs=212.1
Q ss_pred CCCC-CceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCCCC
Q 003469 151 DRAG-EDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFA 229 (817)
Q Consensus 151 ~~tG-~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~ 229 (817)
.++| +||+|||||||||++||+|.++. +..+++.. .....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~-----------------------------~~~~~~~~----------~~~~~ 43 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD-----------------------------LTVLPTLA----------PTAAR 43 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE-----------------------------EEECCCSS----------CCCCC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe-----------------------------eecCcCCC----------CCCCC
Confidence 3688 79999999999999999999761 11111111 00111
Q ss_pred CCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCC-CCHHHHHHHHHHHHHcCCcEEEecC
Q 003469 230 SPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFG-GFVADVVAAIDQAVHDGVDILSLSV 308 (817)
Q Consensus 230 ~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~-~~~~di~~ai~~a~~~g~dVIn~Sl 308 (817)
...|.+||||||||||+|+... .+.||||+|+|+.+|++.+... ....++++||+||++++++||||||
T Consensus 44 ~d~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~ 113 (282)
T 3zxy_A 44 SDGFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISG 113 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccC
Confidence 2234679999999999997532 3689999999999999866433 5677899999999999999999999
Q ss_pred CCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeeecCcceeeEEEeCCCcEEEeee
Q 003469 309 GPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIG 388 (817)
Q Consensus 309 G~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~ 388 (817)
|...... .....+..+++++.++|+++|+||||+|......|+..+++|+|||++.
T Consensus 114 G~~~~~~----~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~-------------------- 169 (282)
T 3zxy_A 114 GELTDFG----EADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD-------------------- 169 (282)
T ss_dssp CEEESSS----CCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT--------------------
T ss_pred ccccccc----cccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC--------------------
Confidence 9754322 2345688899999999999999999999988888889999999998531
Q ss_pred cCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHHHhcCceEEE
Q 003469 389 LSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFV 468 (817)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i 468 (817)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCCccccccCCC
Q 003469 469 LAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARG 548 (817)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~G 548 (817)
.+.++.||+||
T Consensus 170 ---------------------------------------------------------------------~~~~~~~S~~~ 180 (282)
T 3zxy_A 170 ---------------------------------------------------------------------HGHPLDFSNWG 180 (282)
T ss_dssp ---------------------------------------------------------------------TSCBCSSSCCC
T ss_pred ---------------------------------------------------------------------CCccccccCCC
Confidence 12677899998
Q ss_pred CCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhC----CCCCHHHH
Q 003469 549 PNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKH----PYWSPAAI 624 (817)
Q Consensus 549 p~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----p~ls~~~i 624 (817)
+. ..||||+|||.+|+++. .++.|..++|||||||||||++|||+|++ |.++|+||
T Consensus 181 ~~----------~~~~di~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~v 240 (282)
T 3zxy_A 181 ST----------YEQQGILAPGEDILGAK----------PGGGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKV 240 (282)
T ss_dssp HH----------HHHHEEEEECSSEEEEC----------TTSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CC----------ccccceeccCcceeeec----------CCCceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHH
Confidence 86 47899999999999998 45689999999999999999999999974 78999999
Q ss_pred HHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccC
Q 003469 625 KSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALD 675 (817)
Q Consensus 625 k~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 675 (817)
|++|++||++++.. .+.....+|+|+||+.+|++
T Consensus 241 k~~L~~tA~~~~~~-----------------~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 241 RQLLLQSALPCDDD-----------------APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHCBCC------------------------CGGGTTCBCCHHHHHH
T ss_pred HHHHHhhCeeCCCC-----------------CCCccCceeeeEeCHHHHHH
Confidence 99999999987532 12334589999999999986
No 16
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=3.9e-53 Score=464.85 Aligned_cols=304 Identities=21% Similarity=0.193 Sum_probs=191.4
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCc---cCCCceeeeeehhHHHHh
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRS---FCNGKIIGAQHFAEAAIA 218 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~n~ki~~~~~~~~~~~~ 218 (817)
.+|.. +..|+||+|||||||||++||+|++...... ...|...++........ ....+...++.+.....
T Consensus 22 ~~w~~----~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 94 (357)
T 4h6x_A 22 DLHNQ----TLGDPQITIVIIDGDPDYTLSCFEGAEVSKV--FPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALE- 94 (357)
T ss_dssp HHHHH----CSCCTTSEEEEEESCCCTTSGGGTTCEEEEC--CCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHH-
T ss_pred HHHHh----cCCCCCCEEEEEcCCCCCCChhHcCCCcccc--cccccccccccCcccccccccccCccccccccccccc-
Confidence 56776 4678999999999999999999998632211 11454433211100000 00000000000000000
Q ss_pred hccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCC-----CCHHHHHHHH
Q 003469 219 ARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFG-----GFVADVVAAI 293 (817)
Q Consensus 219 ~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~-----~~~~di~~ai 293 (817)
....+..++.|++||||||||||||+.+. .+.||||+|+|+.+|++....+ ....++++||
T Consensus 95 ----~~~~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai 160 (357)
T 4h6x_A 95 ----AVIPDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAI 160 (357)
T ss_dssp ----HHCTTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHH
T ss_pred ----cccCCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHH
Confidence 00112234457789999999999997532 3689999999999999754321 2345689999
Q ss_pred HHHHHcCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeeecCccee
Q 003469 294 DQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYK 373 (817)
Q Consensus 294 ~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~~~~~ 373 (817)
+||+++|++|||||||...... ...+.+..+++++.++|++||+||||+|.....+|+..+++|+|||++.
T Consensus 161 ~~a~~~g~~Vin~S~G~~~~~~----~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~----- 231 (357)
T 4h6x_A 161 DLALELGANIIHCAFCRPTQTS----EGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV----- 231 (357)
T ss_dssp HHHHHTTCSEEEEC---------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-----
T ss_pred HHHHHcCCCEEeeccccCCccc----cchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-----
Confidence 9999999999999999765432 2456888999999999999999999999888888888999999998531
Q ss_pred eEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHH
Q 003469 374 NHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIK 453 (817)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~ 453 (817)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCccc
Q 003469 454 KVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPI 533 (817)
Q Consensus 454 ~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (817)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHH
Q 003469 534 LHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVK 613 (817)
Q Consensus 534 ~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 613 (817)
.+.++.|||||+. ..||||+|||++|+|+.+. ++.|..++|||||||||||++|||+
T Consensus 232 ----~~~~~~fSn~G~~----------~~~~di~APG~~i~s~~~~---------~~~~~~~sGTS~AaP~vaG~~All~ 288 (357)
T 4h6x_A 232 ----DGTPCHFSNWGGN----------NTKEGILAPGEEILGAQPC---------TEEPVRLTGTSMAAPVMTGISALLM 288 (357)
T ss_dssp ----TSSBCTTCC---C----------TTTTEEEEECSSEEECCTT---------CSCCEEECSHHHHHHHHHHHHHHHH
T ss_pred ----CCcccccccCCCC----------CCccceeecCCCeEeccCC---------CCcccccCcHHHHHHHHHHHHHHHH
Confidence 1267899999986 4699999999999999853 4567889999999999999999999
Q ss_pred Hh----CCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccC
Q 003469 614 QK----HPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALD 675 (817)
Q Consensus 614 q~----~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~ 675 (817)
++ +|.|+++|||++|++||++++..+ ...+++||+|+||+.+|++
T Consensus 289 s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~-----------------~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 289 SLQVQQGKPVDAEAVRTALLKTAIPCDPEV-----------------VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHC-------------------------------CTTCBCCHHHHHH
T ss_pred HhhHhhCCCCCHHHHHHHHHhhCccCCCCC-----------------CCCcccceeEEecHHHHHH
Confidence 64 668999999999999999875322 2334689999999999986
No 17
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=4e-51 Score=443.10 Aligned_cols=264 Identities=29% Similarity=0.378 Sum_probs=214.1
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|.++ +..+++|..+...
T Consensus 32 ~aw~~----~~~G~gv~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~~~--- 75 (327)
T 2x8j_A 32 AVWRA----SAKGAGQIIGVIDTGCQVDHPDLAER-----------------------------IIGGVNLTTDYGG--- 75 (327)
T ss_dssp HHHHH----HGGGTTCEEEEEESCCCTTCTTTGGG-----------------------------EEEEEECSSGGGG---
T ss_pred HHHhc----CCCCCCCEEEEEcCCCCCCChhHhhc-----------------------------ccCCccccCCCCC---
Confidence 56765 68999999999999999999999864 4555565443100
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHH---
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH--- 298 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~--- 298 (817)
+.....|+.||||||||||+|+.+ + ..+.||||+|+|+.+|++...+.+..+++++||+||++
T Consensus 76 -----~~~~~~d~~gHGT~VAgiia~~~~------~---~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~ 141 (327)
T 2x8j_A 76 -----DETNFSDNNGHGTHVAGTVAAAET------G---SGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRG 141 (327)
T ss_dssp -----CTTCCCCSSSHHHHHHHHHHCCCC------S---SBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCC
T ss_pred -----CCCCCCCCCCchHHHHHHHhccCC------C---CCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcc
Confidence 112356889999999999999742 1 14689999999999999988766788899999999999
Q ss_pred ---cCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCC-----CCccCCCCcEEEEeeeecCc
Q 003469 299 ---DGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP-----KTLVSYSPWITTVAAAIDDR 370 (817)
Q Consensus 299 ---~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-----~~~~~~~~~vitVgA~~~~~ 370 (817)
.+++|||||||... ....+..+++++.++|++||+||||+|... ..+|+..+++|+|||++.
T Consensus 142 ~~~~~~~Vin~S~G~~~--------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~-- 211 (327)
T 2x8j_A 142 PKGEQMRIITMSLGGPT--------DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDF-- 211 (327)
T ss_dssp TTSCCCSEEEECEEBSC--------CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECT--
T ss_pred cccCCceEEEECCCcCC--------CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECC--
Confidence 89999999999743 235688899999999999999999999752 356778899999998531
Q ss_pred ceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcc
Q 003469 371 RYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTA 450 (817)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~ 450 (817)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCC
Q 003469 451 SIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGL 530 (817)
Q Consensus 451 ~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (817)
T Consensus 212 -------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 212 -------------------------------------------------------------------------------- 211 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHH
Q 003469 531 MPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAA 610 (817)
Q Consensus 531 ~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aA 610 (817)
.+.++.||++||.+ ||+|||++|++++ .++.|..++|||||||||||++|
T Consensus 212 -------~~~~~~fS~~G~~~-------------di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~VaG~aA 261 (327)
T 2x8j_A 212 -------DLRLSDFTNTNEEI-------------DIVAPGVGIKSTY----------LDSGYAELSGTAMAAPHVAGALA 261 (327)
T ss_dssp -------TCCBSCC---CCCC-------------SEEEECSSEEEEC----------STTCEEEEESGGGTHHHHHHHHH
T ss_pred -------CCCCCCccCCCCCc-------------eEecCcCceEeec----------CCCCEEeecCHHHHHHHHHHHHH
Confidence 12678899999865 9999999999997 34689999999999999999999
Q ss_pred HHHHh-----CCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCC
Q 003469 611 LVKQK-----HPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDP 676 (817)
Q Consensus 611 Ll~q~-----~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 676 (817)
||+|+ +|.+++.+||++|++||+++.. +++.||+|+||+.+|++.
T Consensus 262 ll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~---------------------~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 262 LIINLAEDAFKRSLSETEIYAQLVRRATPIGF---------------------TAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS---------------------CHHHHTTCEECTTHHHHH
T ss_pred HHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC---------------------CCCceeeeEECHHHHHHh
Confidence 99999 9999999999999999998641 235899999999999873
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=7.9e-50 Score=431.47 Aligned_cols=286 Identities=28% Similarity=0.397 Sum_probs=222.6
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|.++ +...++|....
T Consensus 17 ~~w~~----~~~G~gv~VaViDtGvd~~H~~l~~~-----------------------------~~~~~~~~~~~----- 58 (310)
T 2ixt_A 17 DTLTS----TTGGSGINIAVLDTGVNTSHPDLVNN-----------------------------VEQCKDFTGAT----- 58 (310)
T ss_dssp TTCCC----CCCCTTCEEEEEESCCCTTCTTTTTT-----------------------------EEEEEESSSSS-----
T ss_pred hhhhc----cCCCCCcEEEEEecCCCCCCHHHhhc-----------------------------ccccccccCCC-----
Confidence 67876 68999999999999999999999975 34445553320
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCC
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~ 301 (817)
........|+.||||||||||+|+... +...+.||||+|+|+.+|++.+.+.+..+++++||+||+++++
T Consensus 59 ---~~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 128 (310)
T 2ixt_A 59 ---TPINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQAT 128 (310)
T ss_dssp ---SCEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhh
Confidence 001123467899999999999997421 1124689999999999999988766788999999999999988
Q ss_pred -----cEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCC--CCCccCCCCcEEEEeeeecCcceee
Q 003469 302 -----DILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPF--PKTLVSYSPWITTVAAAIDDRRYKN 374 (817)
Q Consensus 302 -----dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~--~~~~~~~~~~vitVgA~~~~~~~~~ 374 (817)
+|||||||... ....+..+++++.++|++||+||||+|.. ...+|+..+++|+|||++....
T Consensus 129 ~~~~~~Vin~S~G~~~--------~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~--- 197 (310)
T 2ixt_A 129 ATGTKTIISMSLGSSA--------NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ--- 197 (310)
T ss_dssp HHTCCEEEEECCCBSS--------CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE---
T ss_pred ccCCCeEEEEcCCCCC--------CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc---
Confidence 99999999753 23578889999999999999999999976 3456778899999999641100
Q ss_pred EEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHH
Q 003469 375 HLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKK 454 (817)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~ 454 (817)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccc
Q 003469 455 VSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPIL 534 (817)
Q Consensus 455 ~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (817)
.+
T Consensus 198 -----------------------------------------------------------~g------------------- 199 (310)
T 2ixt_A 198 -----------------------------------------------------------NG------------------- 199 (310)
T ss_dssp -----------------------------------------------------------TT-------------------
T ss_pred -----------------------------------------------------------CC-------------------
Confidence 00
Q ss_pred cCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHH
Q 003469 535 HKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQ 614 (817)
Q Consensus 535 ~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q 614 (817)
...++.||++||......+ ...+.||||+|||++|++++ .++.|..++|||||||||||++|||+|
T Consensus 200 ---~~~~~~~S~~G~~~~~g~~-~~~~~~~di~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~ 265 (310)
T 2ixt_A 200 ---TYRVADYSSRGYISTAGDY-VIQEGDIEISAPGSSVYSTW----------YNGGYNTISGTSMATPHVSGLAAKIWA 265 (310)
T ss_dssp ---EEEECTTSCCCCTTTTTSS-SCCTTCCCEEEECSSEEEEC----------TTSSEEEECSHHHHHHHHHHHHHHHHH
T ss_pred ---CeeeccccCCCCccCCccc-cccCCCeeEECCCCCEeeec----------CCCCEEeeccHHHHHHHHHHHHHHHHH
Confidence 0057889999995321000 01245999999999999997 346899999999999999999999999
Q ss_pred hCCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCc
Q 003469 615 KHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNP 670 (817)
Q Consensus 615 ~~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~ 670 (817)
++|+|++.+||++|++||++++..+.. ...+.....+|+|++|+
T Consensus 266 ~~p~lt~~~v~~~L~~tA~~~~~~~~~------------~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 266 ENPSLSNTQLRSNLQERAKSVDIKGGY------------GAAIGDDYASGFGFARV 309 (310)
T ss_dssp HSTTCCHHHHHHHHHHHHHTSCCCBST------------TCCSSSBTTTBTCBCCC
T ss_pred hCCCCCHHHHHHHHHhhCcccCCCCCc------------ccccCCccccccceeec
Confidence 999999999999999999987643210 12345567899999986
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=4.2e-51 Score=440.97 Aligned_cols=275 Identities=25% Similarity=0.317 Sum_probs=218.4
Q ss_pred CCCCCCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHH
Q 003469 138 GLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAI 217 (817)
Q Consensus 138 g~~~~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~ 217 (817)
|++ ++|+. ...++||+|||||||||++||+|.++. +....+|..+
T Consensus 9 G~~-~aW~~----~~G~~gV~VaViDtGid~~Hpdl~g~~----------------------------~~~~~~~~~~-- 53 (306)
T 4h6w_A 9 GLK-KLWSE----TRGDPKICVAVLDGIVDQNHPCFIGAD----------------------------LTRLPSLVSG-- 53 (306)
T ss_dssp THH-HHHHH----CSCCTTCEEEEESSCCCTTSGGGTTCE----------------------------EEECC-------
T ss_pred CHH-HHHhh----hCCCCCCEEEEEcCCCCCCChhHcCCc----------------------------ccCCCcccCC--
Confidence 443 67877 234589999999999999999999761 2222223221
Q ss_pred hhccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCC-CCCHHHHHHHHHHH
Q 003469 218 AARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLF-GGFVADVVAAIDQA 296 (817)
Q Consensus 218 ~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~-~~~~~di~~ai~~a 296 (817)
+.....|.+||||||||||+|+.+. .+.||||+|+|+.+|++.+.. .....++++||+||
T Consensus 54 ---------~~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a 114 (306)
T 4h6w_A 54 ---------EANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQA 114 (306)
T ss_dssp --------------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHh
Confidence 1122346789999999999997532 368999999999999986543 35677899999999
Q ss_pred HHcCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCCcEEEEeeeecCcceeeEE
Q 003469 297 VHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHL 376 (817)
Q Consensus 297 ~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~~~~~~~~ 376 (817)
++++++|||+|||...... .....+..+++++.++|++||+||||+|.....+|+..+++|+|||++..
T Consensus 115 ~~~g~~vi~~s~g~~~~~~----~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~------- 183 (306)
T 4h6w_A 115 VNNGANIINVSAGQLTDAG----EADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ------- 183 (306)
T ss_dssp HHTTCSEEEECCCEEESSS----CCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-------
T ss_pred hcccceeeeccccccccCC----CccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-------
Confidence 9999999999999654322 23456888999999999999999999998887888889999999985311
Q ss_pred EeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHH
Q 003469 377 NLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVS 456 (817)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~ 456 (817)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccC
Q 003469 457 ETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHK 536 (817)
Q Consensus 457 ~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (817)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHh-
Q 003469 537 SAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQK- 615 (817)
Q Consensus 537 ~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~- 615 (817)
+.++.||++|+. ..||||+|||++|+|+. .++.|..++|||||||||||++|||+++
T Consensus 184 --~~~~~~s~~g~~----------~~~~di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~VaG~~All~s~~ 241 (306)
T 4h6w_A 184 --GKPVDFSNWGDA----------YQKQGILAPGKDILGAK----------PNGGTIRLSGTSFATPIVSGVAALLLSLQ 241 (306)
T ss_dssp --SCBCSSSCBCHH----------HHHHEEEEECSSEEEEC----------TTSCEEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred --CCccccccccCC----------cCcceeecCCcCccccc----------CCCceeccCCCcchhHHHHHHHHHHHHHH
Confidence 156788999975 47899999999999998 4568999999999999999999999864
Q ss_pred ---CCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCC
Q 003469 616 ---HPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDP 676 (817)
Q Consensus 616 ---~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 676 (817)
+|.|+|+|||++|++||+++...+. .+...||+|+||+.+|++.
T Consensus 242 ~~~~p~~t~~~v~~~L~~tA~~~~~~~~-----------------~~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 242 IKRGEKPDPQKVKNALLASATPCNPKDT-----------------DDQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp HHTTCCCCHHHHHHHHHHTCBCCCTTTC-----------------SCGGGGTTCBCCHHHHHHH
T ss_pred HhhCCCCCHHHHHHHHHhhCccCCCCCC-----------------CCCCCcceeecCHHHHHHH
Confidence 6999999999999999999865432 2234799999999999873
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.3e-50 Score=438.73 Aligned_cols=265 Identities=25% Similarity=0.410 Sum_probs=218.6
Q ss_pred CCCCCCCCCCCCCCC--ceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHh
Q 003469 141 TGVWPTGGGFDRAGE--DIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIA 218 (817)
Q Consensus 141 ~~~w~~~~~~~~tG~--GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~ 218 (817)
+.+|.. + +|+ ||+|||||||||++||+|.++ +..+++|..+..
T Consensus 18 ~~aw~~----~-~G~~~gv~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~~- 62 (320)
T 2z30_A 18 PSVWSI----T-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------------IAWCVSTLRGKV- 62 (320)
T ss_dssp GGGTTT----C-CSCCTTCEEEEEESCBCTTCTTTGGG-----------------------------EEEEEECGGGCC-
T ss_pred HHHHHh----c-CCCcCCeEEEEECCCCCCCChhHhcc-----------------------------cccCccccCCcc-
Confidence 367876 3 899 999999999999999999964 444555543210
Q ss_pred hccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHH
Q 003469 219 ARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH 298 (817)
Q Consensus 219 ~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~ 298 (817)
..+..+..|..||||||||||+|..+ + ..+.||||+|+|+.+|++...+.+..+++++||+||++
T Consensus 63 ------~~~~~~~~d~~gHGT~vAgiia~~~n------~---~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~ 127 (320)
T 2z30_A 63 ------STKLRDCADQNGHGTHVIGTIAALNN------D---IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAIL 127 (320)
T ss_dssp ------BCCHHHHBCSSSHHHHHHHHHHCCSS------S---BSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCCCCCHHHHHHHHHcccC------C---CceEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHh
Confidence 00001235789999999999999632 1 13689999999999999988766788899999999998
Q ss_pred c--------------------CCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCCccCCCC
Q 003469 299 D--------------------GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSP 358 (817)
Q Consensus 299 ~--------------------g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~ 358 (817)
+ +++|||||||.... ...+..+++++.++|++||+||||+|.....+|+..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~ 199 (320)
T 2z30_A 128 GPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD--------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYP 199 (320)
T ss_dssp TTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC--------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTST
T ss_pred CcccccccccccccccccccCCceEEEecCCCCCC--------CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCC
Confidence 7 99999999997532 3467888999999999999999999988778888999
Q ss_pred cEEEEeeeecCcceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEE
Q 003469 359 WITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILL 438 (817)
Q Consensus 359 ~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~ 438 (817)
++|+|||++.
T Consensus 200 ~vi~Vga~~~---------------------------------------------------------------------- 209 (320)
T 2z30_A 200 EVIAVGAIDS---------------------------------------------------------------------- 209 (320)
T ss_dssp TEEEEEEECT----------------------------------------------------------------------
T ss_pred CeEEEEeeCC----------------------------------------------------------------------
Confidence 9999998531
Q ss_pred EecccccccCcchHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeE
Q 003469 439 CGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVK 518 (817)
Q Consensus 439 ~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~ 518 (817)
T Consensus 210 -------------------------------------------------------------------------------- 209 (320)
T 2z30_A 210 -------------------------------------------------------------------------------- 209 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeeeEecCCCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCc
Q 003469 519 SFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGT 598 (817)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGT 598 (817)
.+.++.||++|| +|+|||++|+++++ ++.|..++||
T Consensus 210 -------------------~~~~~~~S~~g~---------------~v~APG~~i~s~~~----------~~~~~~~sGT 245 (320)
T 2z30_A 210 -------------------NDNIASFSNRQP---------------EVSAPGVDILSTYP----------DDSYETLMGT 245 (320)
T ss_dssp -------------------TSCBCTTSCSSC---------------SEEEECSSEEEEET----------TTEEEEECSH
T ss_pred -------------------CCCcCcccCCCC---------------CEEeCCCCeEEecc----------CCCeEeccCH
Confidence 126788999987 67999999999983 4689999999
Q ss_pred cchhHHHHHHHHHHHHhC-------------CCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccc
Q 003469 599 SMAAPHIAGIAALVKQKH-------------PYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGS 665 (817)
Q Consensus 599 SmAaP~VAG~aALl~q~~-------------p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~ 665 (817)
|||||||||++|||+|++ |+|++.+||++|++||+++...+ .+..||+
T Consensus 246 S~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~g-------------------~~~~~G~ 306 (320)
T 2z30_A 246 AMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG-------------------WDADYGY 306 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSSS-------------------SBTTTBT
T ss_pred HHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCCCCC-------------------CCCCcCC
Confidence 999999999999999998 99999999999999999875433 2357999
Q ss_pred cccCcccccCC
Q 003469 666 GHVNPRAALDP 676 (817)
Q Consensus 666 G~vn~~~Al~~ 676 (817)
|+||+.+|++.
T Consensus 307 G~vd~~~A~~~ 317 (320)
T 2z30_A 307 GVVRAALAVQA 317 (320)
T ss_dssp CBCCHHHHHHH
T ss_pred ceeCHHHHHHH
Confidence 99999999864
No 21
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.1e-48 Score=441.78 Aligned_cols=291 Identities=25% Similarity=0.327 Sum_probs=224.7
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecC------CCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHH
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYP------HHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEA 215 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~------~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~ 215 (817)
.+|.. .+++|+||+|||||||||+ .||+|.++ +...++|.+.
T Consensus 12 ~~~~~---~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~-----------------------------i~~~~~~~~~ 59 (434)
T 1wmd_A 12 VAQSS---YGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK-----------------------------ITALYALGRT 59 (434)
T ss_dssp HHHHH---HCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC-----------------------------EEEEEETTTT
T ss_pred hhhhc---cCCCCcccEEEEEecCcCCCCCCcccCcccCCC-----------------------------EeeeccccCC
Confidence 46652 1689999999999999999 79999864 4445555321
Q ss_pred HHhhccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCC--CHHHHHHHH
Q 003469 216 AIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGG--FVADVVAAI 293 (817)
Q Consensus 216 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~--~~~di~~ai 293 (817)
..+.|+.||||||||||+|++. .+.||||+|+|+++|++...+.. ..+++.++|
T Consensus 60 -------------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai 115 (434)
T 1wmd_A 60 -------------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLF 115 (434)
T ss_dssp -------------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHH
T ss_pred -------------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHH
Confidence 2456889999999999999642 25799999999999999765432 456799999
Q ss_pred HHHHHcCCcEEEecCCCCCCCCCCccCCCChHHHHHHHH-HHcCceEEEecCCCCCCC--CCccCCCCcEEEEeeeecCc
Q 003469 294 DQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAA-VKAGVFVAQAAGNGGPFP--KTLVSYSPWITTVAAAIDDR 370 (817)
Q Consensus 294 ~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a-~~~Gv~vV~AAGN~G~~~--~~~~~~~~~vitVgA~~~~~ 370 (817)
++|+++|++|||||||..... ..+....+++++ .++|++||+||||+|... ...|+.++++|+|||++..+
T Consensus 116 ~~a~~~g~~Vin~S~G~~~~~------~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~ 189 (434)
T 1wmd_A 116 SQAYSAGARIHTNSWGAAVNG------AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLR 189 (434)
T ss_dssp HHHHHTTCSEEEECCCBCCTT------CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSC
T ss_pred HHHHhcCCeEEEecCCCCcCC------cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccC
Confidence 999999999999999986421 123556677666 589999999999999864 34577899999999975322
Q ss_pred ceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcc
Q 003469 371 RYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTA 450 (817)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~ 450 (817)
... +
T Consensus 190 ~~~--------------------------------------------------------------------------~-- 193 (434)
T 1wmd_A 190 PSF--------------------------------------------------------------------------G-- 193 (434)
T ss_dssp GGG--------------------------------------------------------------------------C--
T ss_pred ccc--------------------------------------------------------------------------C--
Confidence 000 0
Q ss_pred hHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCC
Q 003469 451 SIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGL 530 (817)
Q Consensus 451 ~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (817)
T Consensus 194 -------------------------------------------------------------------------------- 193 (434)
T 1wmd_A 194 -------------------------------------------------------------------------------- 193 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCC--CccCCceEeecCccchhHHHHHH
Q 003469 531 MPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEA--NFVGEGFALISGTSMAAPHIAGI 608 (817)
Q Consensus 531 ~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~--~~~~~~y~~~sGTSmAaP~VAG~ 608 (817)
.+....+.+++||||||+.++ ++||||+|||++|+++.+....... ...++.|..++|||||||||||+
T Consensus 194 --~~~~~~~~~a~fS~~G~~~~g-------~~kpdi~ApG~~i~s~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~ 264 (434)
T 1wmd_A 194 --SYADNINHVAQFSSRGPTKDG-------RIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGN 264 (434)
T ss_dssp --GGGSCTTSBCTTSCCCCCTTS-------CCCCCEEEECSSEEEECCTTCCGGGSSEEEETTEEEECSHHHHHHHHHHH
T ss_pred --cccCCCCccccccCCCCCCCC-------CCCceEEcCCCCeEecCCCCCCCcccccCCCCceEeecchhHHHHHHHHH
Confidence 000112478999999999986 9999999999999999854221000 00256899999999999999999
Q ss_pred HHHHHHhCCCC-----CHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCCCe
Q 003469 609 AALVKQKHPYW-----SPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGL 678 (817)
Q Consensus 609 aALl~q~~p~l-----s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 678 (817)
+|||+|++|++ ++++||++|++||+++.. ..+.+.||||++|+.+|+...+
T Consensus 265 aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-------------------~~~~~~~G~G~vd~~~a~~~~~ 320 (434)
T 1wmd_A 265 VAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-------------------GYPNGNQGWGRVTLDKSLNVAY 320 (434)
T ss_dssp HHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS-------------------CSSCTTTTTCBCCHHHHHTCEE
T ss_pred HHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC-------------------CCCCccCCcCeEeHHHhcccce
Confidence 99999998875 899999999999987532 2345689999999999997653
No 22
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=3.2e-49 Score=433.34 Aligned_cols=269 Identities=18% Similarity=0.131 Sum_probs=215.2
Q ss_pred CCCCCCCCCCCCCC--ceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhh
Q 003469 142 GVWPTGGGFDRAGE--DIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAA 219 (817)
Q Consensus 142 ~~w~~~~~~~~tG~--GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~ 219 (817)
.+|.. ++|+ ||+||||||||| +||+|.++ +..+++|..+.
T Consensus 34 ~aw~~-----~~G~~~gv~VaViDsGid-~Hp~l~~~-----------------------------~~~~~~~~~~~--- 75 (347)
T 2iy9_A 34 ETTMS-----LTDKNTPVVVSVVDSGVA-FIGGLSDS-----------------------------EFAKFSFTQDG--- 75 (347)
T ss_dssp HHHHH-----TSCTTSCCEEEEEESCCC-CCGGGTTC-----------------------------EEEEEECBTTC---
T ss_pred HHHHH-----hcCCCCCCEEEEEcCCCc-CChhhhcC-----------------------------cccCCcccCCC---
Confidence 56765 6899 999999999999 99999975 44455554320
Q ss_pred ccCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHc
Q 003469 220 RAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD 299 (817)
Q Consensus 220 ~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~ 299 (817)
.+.+...+.|+.||||||||||+|+. ++.||||+|+|+.+|++.+.... ++++||+||+++
T Consensus 76 ----~~~~~~~~~d~~gHGT~vAgiia~~~------------g~~GvAp~a~l~~~~v~~~~~~~---~~~~ai~~a~~~ 136 (347)
T 2iy9_A 76 ----SPFPVKKSEALYIHGTAMASLIASRY------------GIYGVYPHALISSRRVIPDGVQD---SWIRAIESIMSN 136 (347)
T ss_dssp ----CSSCCSSSHHHHHHHHHHHHHHHCSS------------SSCCSSTTCEEEEEECCSSBCTT---HHHHHHHHHHTC
T ss_pred ----CCCCCCCCCCCCCcHHHHHHHHhccc------------CCcccCCCCEEEEEEEecCCCHH---HHHHHHHHHHhh
Confidence 00111245578899999999999971 35899999999999999764332 899999999999
Q ss_pred ------CCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCC-------CCCccCCCC--------
Q 003469 300 ------GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPF-------PKTLVSYSP-------- 358 (817)
Q Consensus 300 ------g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~-------~~~~~~~~~-------- 358 (817)
|++|||||||..... .....+..+++++.++|++||+||||+|.. ...+|+..+
T Consensus 137 ~~~~~~~~~Vin~S~G~~~~~-----~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~ 211 (347)
T 2iy9_A 137 VFLAPGEEKIINISGGQKGVA-----SASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKK 211 (347)
T ss_dssp TTSCTTEEEEEEESSCBCCC------CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHH
T ss_pred hhcccCCceEEEeccccCCCC-----CcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccc
Confidence 999999999975321 135678899999999999999999999985 345677788
Q ss_pred --cEEEEeeeec--CcceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccc
Q 003469 359 --WITTVAAAID--DRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEG 434 (817)
Q Consensus 359 --~vitVgA~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~g 434 (817)
++|+|||++. +...
T Consensus 212 ~~~vi~Vga~~~~~~g~~-------------------------------------------------------------- 229 (347)
T 2iy9_A 212 QDPVIRVAALAQYRKGET-------------------------------------------------------------- 229 (347)
T ss_dssp TCCEEEEEEECCCCTTSC--------------------------------------------------------------
T ss_pred cCCEEEEEEcccCCCCce--------------------------------------------------------------
Confidence 9999998642 1100
Q ss_pred cEEEEecccccccCcchHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCc
Q 003469 435 NILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWT 514 (817)
Q Consensus 435 ki~~~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~ 514 (817)
T Consensus 230 -------------------------------------------------------------------------------- 229 (347)
T 2iy9_A 230 -------------------------------------------------------------------------------- 229 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeEeeeeeeEecCCCcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEe
Q 003469 515 GRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFAL 594 (817)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~ 594 (817)
....+.++.||++||+ ||||+|||++|+++++ ++.|..
T Consensus 230 --------------------~~~~~~~~~fS~~G~~------------~~di~APG~~i~s~~~----------~~~~~~ 267 (347)
T 2iy9_A 230 --------------------PVLHGGGITGSRFGNN------------WVDIAAPGQNITFLRP----------DAKTGT 267 (347)
T ss_dssp --------------------CCBCCCSSSCBCBCTT------------TCSEEEECSSEEEECT----------TSCEEE
T ss_pred --------------------ecccCCCCCCCCCCCC------------CCEEEeCCCCeEeecC----------CCCeEe
Confidence 0001256799999983 4599999999999983 568999
Q ss_pred ecCccchhHHHHHHHHHHHHhCCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCccccc
Q 003469 595 ISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAAL 674 (817)
Q Consensus 595 ~sGTSmAaP~VAG~aALl~q~~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al 674 (817)
++|||||||||||++|||+|++|+|++.+||++|++||+++...+ ...+|+|+||+.+|+
T Consensus 268 ~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~--------------------~~~~G~G~ld~~~A~ 327 (347)
T 2iy9_A 268 GSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV--------------------DKVTEGRVLNAEKAI 327 (347)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT--------------------TTSGGGEECCHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC--------------------CccccCCEecHHHHH
Confidence 999999999999999999999999999999999999999875322 248999999999999
Q ss_pred CC
Q 003469 675 DP 676 (817)
Q Consensus 675 ~~ 676 (817)
+.
T Consensus 328 ~~ 329 (347)
T 2iy9_A 328 SM 329 (347)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=6.8e-49 Score=429.94 Aligned_cols=300 Identities=25% Similarity=0.340 Sum_probs=218.6
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccc-cCCCCCCccCCCceeeeeehhHHHHhhc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCE-VDPDTKRSFCNGKIIGAQHFAEAAIAAR 220 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~ki~~~~~~~~~~~~~~ 220 (817)
.+|.. +++|+||+||||||||| +||+|.++...++..+. +.... .+..... ...-...++.. ..
T Consensus 23 ~aw~~----g~~G~gV~VaViDtGi~-~hp~l~~~~~~~~~~~~--~~~~~~d~~~~~~----~~~~~~~~~~~-~~--- 87 (340)
T 3lpc_A 23 KVWDM----GFTGQNVVVAVVDTGIL-HHRDLNANVLPGYDFIS--NSQISLDGDGRDA----DPFDEGDWFDN-WA--- 87 (340)
T ss_dssp HHHHH----TCSCTTCEEEEEESCBC-CCTTTGGGBCCCEECCC--CHHHHCSSSSSBS----CCBCCCCCBCT-TT---
T ss_pred HHHHh----cCCCCCeEEEEEcCCCC-CChhhhcccccCccccC--CccccccCCCccC----Ccccccccccc-cc---
Confidence 56765 68999999999999998 99999876322211110 00000 0000000 00000000000 00
Q ss_pred cCCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHH--
Q 003469 221 AFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH-- 298 (817)
Q Consensus 221 ~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~-- 298 (817)
....+.+.....|..||||||||||+|..... ..+.||||+|+|+.+|++...+ ++.+++++||+||++
T Consensus 88 ~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~~v~~~~~-~~~~~~~~ai~~a~~~~ 158 (340)
T 3lpc_A 88 CGGRPDPRKERSDSSWHGSHVAGTIAAVTNNR--------IGVAGVAYGAKVVPVRALGRCG-GYDSDISDGLYWAAGGR 158 (340)
T ss_dssp TSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSS--------SSCCCTTTTSEEEEEECCBTTB-CCHHHHHHHHHHHHTCC
T ss_pred ccCCCCcccCCCCCCCCHHHHHHHHHccCCCC--------CcceeecCCCEEEEEEEecCCC-CcHHHHHHHHHHHhccc
Confidence 00011122345688999999999999975422 1368999999999999998764 788899999999998
Q ss_pred --------cCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCC-CccCCCCcEEEEeeeecC
Q 003469 299 --------DGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDD 369 (817)
Q Consensus 299 --------~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~~~~vitVgA~~~~ 369 (817)
.+++|||||||.... ....+..+++++.++|++||+||||+|.... ..++..+++|+|||++.
T Consensus 159 ~~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~- 230 (340)
T 3lpc_A 159 IAGIPENRNPAKVINMSLGSDGQ-------CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS- 230 (340)
T ss_dssp CTTSCCCSSCCSEEEECCCEESC-------CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT-
T ss_pred ccccccccCCCeEEEeCcCCCCC-------cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC-
Confidence 899999999997432 2446788899999999999999999997654 45778899999998531
Q ss_pred cceeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCc
Q 003469 370 RRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGT 449 (817)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~ 449 (817)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chHHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCC
Q 003469 450 ASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDG 529 (817)
Q Consensus 450 ~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (817)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHH
Q 003469 530 LMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIA 609 (817)
Q Consensus 530 ~~~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~a 609 (817)
.+.++.||++||.+ ||+|||++|+++++..... ...+.|..++|||||||||||++
T Consensus 231 --------~~~~~~~S~~g~~~-------------di~ApG~~i~s~~~~~~~~---~~~~~~~~~sGTS~AaP~vaG~a 286 (340)
T 3lpc_A 231 --------RGIRASFSNYGVDV-------------DLAAPGQDILSTVDSGTRR---PVSDAYSFMAGTSMATPHVSGVA 286 (340)
T ss_dssp --------TSSBCTTCCBSTTC-------------CEEEECSSEEEEEESCSSS---CCSEEEEEECSHHHHHHHHHHHH
T ss_pred --------CCCcCCCCCCCCCc-------------eEEecCCCeecccCCCCcC---CCCCcceecccHhHHHHHHHHHH
Confidence 12678899999754 9999999999998653211 12346999999999999999999
Q ss_pred HHHHHh-C---CCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCCC
Q 003469 610 ALVKQK-H---PYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPG 677 (817)
Q Consensus 610 ALl~q~-~---p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 677 (817)
|||+|+ + |.|++++||++|++||+++.. .+...||+|+||+.+||+..
T Consensus 287 All~~~~~~~~p~lt~~~v~~~L~~tA~~~~~--------------------~~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 287 ALVISAANSVNKNLTPAELKDVLVSTTSPFNG--------------------RLDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS--------------------CCSSCCCSSBCCHHHHHHHH
T ss_pred HHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC--------------------CCCCCcccceecHHHHHHHH
Confidence 999998 5 999999999999999998642 23358999999999998743
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=7e-48 Score=409.00 Aligned_cols=235 Identities=28% Similarity=0.432 Sum_probs=202.0
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|.++ +..+++|.+.
T Consensus 20 ~aw~~----~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~------ 60 (284)
T 1sh7_A 20 RNYNA----NFDGFGVTAYVIDTGVNNNHEEFGGR-----------------------------SVSGYDFVDN------ 60 (284)
T ss_dssp SBCCC----SCCCTTCEEEEEESCCCTTCTTTTTC-----------------------------EEEEEETTTT------
T ss_pred hhhhc----CCCCCCCEEEEEcCCCCCCChhHcCC-----------------------------ccccccccCC------
Confidence 46766 68999999999999999999999964 4455666542
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHc--
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD-- 299 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~-- 299 (817)
..++.|+.||||||||||+|+. .||||+|+|+.+|++++.+.+..+++++||+|++++
T Consensus 61 ------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~ 120 (284)
T 1sh7_A 61 ------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNAS 120 (284)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCC
T ss_pred ------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCC
Confidence 1245688999999999999962 599999999999999887678889999999999985
Q ss_pred CCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCC-CccCCCCcEEEEeeeecCcceeeEEEe
Q 003469 300 GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDDRRYKNHLNL 378 (817)
Q Consensus 300 g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~ 378 (817)
+++|||||||.. ....+..+++++.++|++||+||||+|.... ..|+..+++|+|||++.
T Consensus 121 ~~~Vin~S~G~~---------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (284)
T 1sh7_A 121 GPSVANMSLGGG---------QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS---------- 181 (284)
T ss_dssp SSEEEEECCCBS---------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT----------
T ss_pred CCcEEEeCCCCC---------CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC----------
Confidence 799999999974 2357889999999999999999999997643 45778899999998531
Q ss_pred CCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHH
Q 003469 379 GNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSET 458 (817)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~ 458 (817)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCC
Q 003469 459 AKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSA 538 (817)
Q Consensus 459 ~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (817)
.
T Consensus 182 -------------------------------------------------------------------------------~ 182 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------S 182 (284)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred CccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCC
Q 003469 539 PQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPY 618 (817)
Q Consensus 539 ~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ 618 (817)
+.++.||++||.+ ||+|||++|++++ .++.|..++|||||||||||++|||+|++|+
T Consensus 183 ~~~~~~S~~G~~~-------------di~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 239 (284)
T 1sh7_A 183 DSRSSFSNWGSCV-------------DLFAPGSQIKSAW----------YDGGYKTISGTSMATPHVAGVAALYLQENNG 239 (284)
T ss_dssp SBBCTTCCBSTTC-------------CEEEECSSEEEEC----------TTSSEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCcccCCCCcc-------------EEEeccCCeEEec----------CCCCEEEccChHHHHHHHHHHHHHHHHHCCC
Confidence 2678899999976 9999999999997 3458999999999999999999999999999
Q ss_pred CCHHHHHHHHhccccccc
Q 003469 619 WSPAAIKSALMTTTTKLD 636 (817)
Q Consensus 619 ls~~~ik~~L~~TA~~~~ 636 (817)
|+++|||++|++||++..
T Consensus 240 lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 240 LTPLQLTGLLNSRASENK 257 (284)
T ss_dssp CCHHHHHHHHHHHSEESC
T ss_pred CCHHHHHHHHHhhCccCC
Confidence 999999999999998864
No 25
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.6e-47 Score=461.19 Aligned_cols=357 Identities=22% Similarity=0.255 Sum_probs=245.6
Q ss_pred CCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCC--CHHHHHHHHHHHHH-----cCCcEE
Q 003469 232 LDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGG--FVADVVAAIDQAVH-----DGVDIL 304 (817)
Q Consensus 232 ~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~--~~~di~~ai~~a~~-----~g~dVI 304 (817)
.|++||||||||||||.. ++ ..+.||||+|+|+.+|+++...+. ..++++.+|.+|++ +|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999985 21 246899999999999999765332 45667777777777 799999
Q ss_pred EecCCCCCCCCCCccCCCChHHHHHHHHH-HcCceEEEecCCCCCCCCC--ccC--CCCcEEEEeeeecCcceeeEEEeC
Q 003469 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAV-KAGVFVAQAAGNGGPFPKT--LVS--YSPWITTVAAAIDDRRYKNHLNLG 379 (817)
Q Consensus 305 n~SlG~~~~~~~~~~~~~~~~~~a~~~a~-~~Gv~vV~AAGN~G~~~~~--~~~--~~~~vitVgA~~~~~~~~~~~~~~ 379 (817)
|||||...... ..+.+..++.++. ++|++||+||||+|....+ .++ .++++|+|||++........+..
T Consensus 338 NmS~G~~~~~~-----~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~- 411 (1354)
T 3lxu_X 338 NMSYGEHANWS-----NSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM- 411 (1354)
T ss_dssp EECCCCCCSCS-----SCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----
T ss_pred EcCCccCCCCC-----ccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc-
Confidence 99999865322 2457788888886 8999999999999986443 455 38999999997533210000000
Q ss_pred CCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHH
Q 003469 380 NGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETA 459 (817)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~ 459 (817)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCC
Q 003469 460 KSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAP 539 (817)
Q Consensus 460 ~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (817)
.....+
T Consensus 412 --------------------------------------------------------------------------~~~~~g 417 (1354)
T 3lxu_X 412 --------------------------------------------------------------------------REKLPG 417 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------ccCCCC
Confidence 000123
Q ss_pred ccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHH----h
Q 003469 540 QVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQ----K 615 (817)
Q Consensus 540 ~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~ 615 (817)
.++.||||||+.++ ++||||+|||++|.++... .++.|..++|||||||||||++|||++ +
T Consensus 418 ~~asFSS~GPt~dg-------~~KpDIaAPG~~I~St~~~--------~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~ 482 (1354)
T 3lxu_X 418 NVYTWTSRDPCIDG-------GQGVTVCAPGGAIASVPQF--------TMSKSQLMNGTSMAAPHVAGAVALLISGLKQQ 482 (1354)
T ss_dssp CCCCCCCCSCCSSS-------SCCEEEEEEC-----------------------CCCCGGGCHHHHHHHHHHHHHHHHHT
T ss_pred ccccccCCCCCccC-------CCcceEEecCceEEEeecC--------CCCceecCCCCCHHHHHHHHHHHHHHHhhHhh
Confidence 78999999999886 8999999999999997532 246799999999999999999999987 7
Q ss_pred CCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCCCeeeecCchhhhhccccCC
Q 003469 616 HPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTP 695 (817)
Q Consensus 616 ~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~lv~~~~~~~~~~~~~~~~ 695 (817)
+|+|++.+||++|++||+++.. .+++.||+|+||+.+|++..+.++....+++.|+|..+
T Consensus 483 ~P~LTp~qVk~lL~~TA~~~~~--------------------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~ 542 (1354)
T 3lxu_X 483 NIEYSPYSIKRAISVTATKLGY--------------------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVG 542 (1354)
T ss_dssp TCCCCHHHHHHHHHTTSBCCTT--------------------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEET
T ss_pred CCCCCHHHHHHHHHHhCccCCC--------------------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEec
Confidence 9999999999999999998753 23468999999999999998888888889999999876
Q ss_pred CCCceeeecccCcccCCCCCCCCcCCCCcEEEeeecceEEEEEEEE----E---cCCC--ceEEEEEEcCCCcEEEEecC
Q 003469 696 GIDIHEIRNYTNQPCNYSMGHPYNFNTPSITVAHLVKTQVVTRTVT----N---VAEE--ETYSMSARMQPAIAIEVNPP 766 (817)
Q Consensus 696 ~~~~~~i~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~tv~----n---~~~~--~ty~~~~~~~~~~~v~~~~~ 766 (817)
..+...|..... .. .....++.+|+ | .... ..|.+.+.......+--.|.
T Consensus 543 ~~~~rgIylR~~-------------~~--------~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~~wv~~p~ 601 (1354)
T 3lxu_X 543 NNADKGIHLRQG-------------VQ--------RNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQPWVQCGA 601 (1354)
T ss_dssp TTTBSSEEECSS-------------CC--------CSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESSTTEEECS
T ss_pred CCCCCceEEecc-------------cc--------CCceEEEEEEeeeecCcccCChhhccceEEEEEEecCCCceeccc
Confidence 433333321110 00 11122222222 1 1111 22322222111112222377
Q ss_pred eEEEcCCCEEEEEEEEEEecCCCceEEEEEEEEe----CCCcEEEEeEEEEe
Q 003469 767 AMTLKPGASRKFTVTLTVRSVTGTYSFGEICMKG----SRGHKVNIPVIAQG 814 (817)
Q Consensus 767 ~~tv~~g~~~~~~v~~~~~~~~~~~~~G~i~~~~----~~~~~l~iP~~~~~ 814 (817)
.+.| .++.++|.|++++........++.|.... ..++.++||+.|..
T Consensus 602 ~l~l-~~~~r~~~v~vDp~~L~~G~h~~~v~~~D~~~~~~gp~f~ipvTv~~ 652 (1354)
T 3lxu_X 602 FLDL-SYGTRSIAVRVDPTGLQPGVHSAVIRAYDTDCVQKGSLFEIPVTVVQ 652 (1354)
T ss_dssp CEEC-TTSCEEEEEEECGGGCCSEEEEEEEEEEESSCTTSCCSEEEEEEEEE
T ss_pred ceee-cCCCceEEEEECCCCCCCcceeEEEEEEEcCCcccCceEEeeEEEEe
Confidence 7777 78999999999998777777788888764 34788999997743
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=7.7e-48 Score=407.60 Aligned_cols=225 Identities=30% Similarity=0.407 Sum_probs=195.2
Q ss_pred CCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCCCCCC
Q 003469 152 RAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASP 231 (817)
Q Consensus 152 ~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (817)
.+|+||+|||||||||++||+|.++ +..+++|. .++
T Consensus 28 ~~G~gv~VaViDsGvd~~H~~l~~~-----------------------------~~~~~~~~---------------~~~ 63 (279)
T 2pwa_A 28 SAGQGSCVYVIDTGIEASHPEFEGR-----------------------------AQMVKTYY---------------YSS 63 (279)
T ss_dssp TTTTTEEEEEEESCCCTTCGGGTTC-----------------------------EEEEEESS---------------SCS
T ss_pred CCCCCCEEEEEeCCCCCCChhHhCc-----------------------------cccccCCC---------------CCC
Confidence 7999999999999999999999975 34445553 134
Q ss_pred CCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCC-------cEE
Q 003469 232 LDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV-------DIL 304 (817)
Q Consensus 232 ~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~-------dVI 304 (817)
.|+.||||||||||+|+ ..||||+|+|+.+|++++.+.+..+++++||+|++++++ +||
T Consensus 64 ~d~~gHGT~vAgiia~~--------------~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vi 129 (279)
T 2pwa_A 64 RDGNGHGTHCAGTVGSR--------------TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVA 129 (279)
T ss_dssp SCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEE
T ss_pred CCCCCCHHHHHHHHHhc--------------ccccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEE
Confidence 57899999999999996 269999999999999998766888999999999999987 999
Q ss_pred EecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCC-CccCCCCcEEEEeeeecCcceeeEEEeCCCcE
Q 003469 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDDRRYKNHLNLGNGKI 383 (817)
Q Consensus 305 n~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~ 383 (817)
|||||.. ..+.+..+++++.++|++||+||||+|.... ..|+..+++|+|||++.
T Consensus 130 n~S~G~~---------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 185 (279)
T 2pwa_A 130 SLSLGGG---------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDR--------------- 185 (279)
T ss_dssp EECCCEE---------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------
T ss_pred EecCCCC---------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecC---------------
Confidence 9999963 2457889999999999999999999998653 35778899999998531
Q ss_pred EEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHHHhcC
Q 003469 384 LAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLG 463 (817)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~G 463 (817)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 2pwa_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCCcccc
Q 003469 464 AAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVAL 543 (817)
Q Consensus 464 a~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 543 (817)
.+.++.
T Consensus 186 --------------------------------------------------------------------------~~~~~~ 191 (279)
T 2pwa_A 186 --------------------------------------------------------------------------YDRRSS 191 (279)
T ss_dssp --------------------------------------------------------------------------TSBBCT
T ss_pred --------------------------------------------------------------------------CCCcCC
Confidence 126789
Q ss_pred ccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCCCCHHH
Q 003469 544 FSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAA 623 (817)
Q Consensus 544 fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~ 623 (817)
||+|||.+ ||+|||++|+++++ ++.|..++|||||||||||++|||+|+ |++++.|
T Consensus 192 ~S~~G~~~-------------di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~ 247 (279)
T 2pwa_A 192 FSNYGSVL-------------DIFGPGTDILSTWI----------GGSTRSISGTSMATPHVAGLAAYLMTL-GKTTAAS 247 (279)
T ss_dssp TCCBSTTC-------------CEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTT
T ss_pred cCCCCCcc-------------eEEEecCCeEEeec----------CCCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHH
Confidence 99999975 99999999999984 457999999999999999999999999 9999999
Q ss_pred HHHHHhccccccc
Q 003469 624 IKSALMTTTTKLD 636 (817)
Q Consensus 624 ik~~L~~TA~~~~ 636 (817)
||++|++||++..
T Consensus 248 v~~~L~~tA~~~~ 260 (279)
T 2pwa_A 248 ACRYIADTANKGD 260 (279)
T ss_dssp HHHHHHHHSEESC
T ss_pred HHHHHHHhCcccc
Confidence 9999999998753
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=3e-47 Score=403.74 Aligned_cols=237 Identities=30% Similarity=0.402 Sum_probs=201.3
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|.++ +..+++|.++
T Consensus 22 ~~~~~----~~~G~gv~VaViDtGid~~Hpdl~~~-----------------------------~~~~~d~~~~------ 62 (278)
T 2b6n_A 22 NNYHT----DYDGSGVTAFVIDTGVLNTHNEFGGR-----------------------------ASSGYDFIDN------ 62 (278)
T ss_dssp SEEEC----SCCCTTCEEEEEESCCCTTCGGGTTC-----------------------------EEEEEETTTT------
T ss_pred hhccc----CCCCCCCEEEEEeCCCCCCChhHhcc-----------------------------cccCeecCCC------
Confidence 45665 68999999999999999999999974 3445566432
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHH--c
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH--D 299 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~--~ 299 (817)
..++.|+.||||||||||+|+. .||||+|+|+.+|++++.+.+..+++++||+|+++ .
T Consensus 63 ------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 122 (278)
T 2b6n_A 63 ------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNAS 122 (278)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCC
T ss_pred ------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCC
Confidence 1245688999999999999962 59999999999999988767888999999999998 5
Q ss_pred CCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCC-CccCCCCcEEEEeeeecCcceeeEEEe
Q 003469 300 GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDDRRYKNHLNL 378 (817)
Q Consensus 300 g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~ 378 (817)
+++|||||||... ...+..+++++.++|++||+||||+|.... ..|+..+++|+|||++.
T Consensus 123 g~~Vin~S~G~~~---------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 183 (278)
T 2b6n_A 123 GPAVANMSLGGGA---------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---------- 183 (278)
T ss_dssp SSEEEEECCCEEC---------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred CCeEEEECCCCCc---------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----------
Confidence 9999999999742 357888999999999999999999998653 34678899999998531
Q ss_pred CCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHH
Q 003469 379 GNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSET 458 (817)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~ 458 (817)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCC
Q 003469 459 AKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSA 538 (817)
Q Consensus 459 ~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (817)
.
T Consensus 184 -------------------------------------------------------------------------------~ 184 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------N 184 (278)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred CccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCC
Q 003469 539 PQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPY 618 (817)
Q Consensus 539 ~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ 618 (817)
+.++.||++||.. ||+|||++|++++.. .++.|..++|||||||||||++|||+|++|+
T Consensus 185 ~~~~~~S~~G~~~-------------di~ApG~~i~s~~~~--------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 243 (278)
T 2b6n_A 185 DSRSSFSNYGTCL-------------DIYAPGSSITSSWYT--------SNSATNTISGTSMASPHVAGVAALYLDENPN 243 (278)
T ss_dssp SBBCTTCCBSTTC-------------CEEEECSSEEEECTT--------STTCEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCCcCCCCCCC-------------eEEeCCCCeECcccC--------CCCCEEEeCcHHHHHHHHHHHHHHHHHhCCC
Confidence 2678899999865 999999999999853 2358999999999999999999999999999
Q ss_pred CCHHHHHHHHhccccccc
Q 003469 619 WSPAAIKSALMTTTTKLD 636 (817)
Q Consensus 619 ls~~~ik~~L~~TA~~~~ 636 (817)
|++.|||++|++||++..
T Consensus 244 lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 244 LSPAQVTNLLKTRATADK 261 (278)
T ss_dssp CCHHHHHHHHHHHSEESC
T ss_pred CCHHHHHHHHHHhCccCC
Confidence 999999999999998753
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=5e-47 Score=402.24 Aligned_cols=236 Identities=27% Similarity=0.382 Sum_probs=202.3
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|.++ +...++|..
T Consensus 22 ~a~~~----~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~------- 61 (276)
T 4dzt_A 22 NSYTY----TATGRGVNVYVIDTGIRTTHREFGGR-----------------------------ARVGYDALG------- 61 (276)
T ss_dssp SCEEC----SCCCTTCEEEEEESCCCTTCGGGTTC-----------------------------EEEEEETTS-------
T ss_pred cceec----CCCCCCcEEEEEccCCCCCChhHccC-----------------------------eeccccCCC-------
Confidence 46666 68999999999999999999999865 444455432
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHc--
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD-- 299 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~-- 299 (817)
..+.|.+||||||||||+|.. .||||+|+|+.+|++.+.+.+..+++++|++|++++
T Consensus 62 -------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~ 120 (276)
T 4dzt_A 62 -------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHR 120 (276)
T ss_dssp -------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCC
T ss_pred -------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCC
Confidence 244578999999999999962 699999999999999987778899999999999997
Q ss_pred CCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCC-ccCCCCcEEEEeeeecCcceeeEEEe
Q 003469 300 GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKT-LVSYSPWITTVAAAIDDRRYKNHLNL 378 (817)
Q Consensus 300 g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-~~~~~~~vitVgA~~~~~~~~~~~~~ 378 (817)
+++|||||||.. ....+..+++++.++|++||+||||+|..... .|+..+++|+|||++.
T Consensus 121 ~~~vin~S~g~~---------~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (276)
T 4dzt_A 121 RPAVANMSLGGG---------VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS---------- 181 (276)
T ss_dssp SSEEEEECCCEE---------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------
T ss_pred CCeEEEECCCCC---------CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC----------
Confidence 999999999963 24578899999999999999999999976544 3678899999998531
Q ss_pred CCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHH
Q 003469 379 GNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSET 458 (817)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~ 458 (817)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCC
Q 003469 459 AKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSA 538 (817)
Q Consensus 459 ~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (817)
.
T Consensus 182 -------------------------------------------------------------------------------~ 182 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------S 182 (276)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred CccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCC
Q 003469 539 PQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPY 618 (817)
Q Consensus 539 ~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ 618 (817)
+.++.||++||.. ||+|||++|.+++.. .+..|..++|||||||||||++|||+|++|+
T Consensus 183 ~~~~~~S~~g~~~-------------dv~ApG~~i~s~~~~--------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 241 (276)
T 4dzt_A 183 DARASFSNYGSCV-------------DLFAPGASIPSAWYT--------SDTATQTLNGTSMATPHVAGVAALYLEQNPS 241 (276)
T ss_dssp SBBCTTCCBSTTC-------------CEEEECSSEEEECTT--------SSSCEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCCcCCCCCCc-------------eEEeCCCCeEccccC--------CCCceEEeeEHHHHHHHHHHHHHHHHHHCCC
Confidence 2678999999976 999999999999854 2357999999999999999999999999999
Q ss_pred CCHHHHHHHHhcccccccc
Q 003469 619 WSPAAIKSALMTTTTKLDR 637 (817)
Q Consensus 619 ls~~~ik~~L~~TA~~~~~ 637 (817)
++++|||++|++||++...
T Consensus 242 lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 242 ATPASVASAILNGATTGRL 260 (276)
T ss_dssp CCHHHHHHHHHHHSEESCC
T ss_pred CCHHHHHHHHHhhCcCCcc
Confidence 9999999999999998654
No 29
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=3.5e-46 Score=424.66 Aligned_cols=293 Identities=19% Similarity=0.208 Sum_probs=214.5
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|.++.. ...+++|.+..
T Consensus 29 ~aw~~----g~~G~gv~VaViDtGvd~~Hpdl~~~~~---------------------------~~~~~d~~~~~----- 72 (471)
T 1p8j_A 29 EAWAQ----GFTGHGIVVSILDDGIEKNHPDLAGNYD---------------------------PGASFDVNDQD----- 72 (471)
T ss_dssp HHHHT----TCSCTTCEEEEEEBCCCTTCTTTGGGBC---------------------------GGGCEETTTTB-----
T ss_pred HHHhc----CCCCCCCEEEEEeCCcCCCChhHhhccC---------------------------ccCcccccCCC-----
Confidence 46665 6899999999999999999999997510 01123443220
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHH-cC
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH-DG 300 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~-~g 300 (817)
..+.+...+.|.+||||||||||||...++ ..+.||||+|+|+.+|+++ +..+++++|++++++ ++
T Consensus 73 -~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~--------~g~~GvAp~a~i~~~rv~~----g~~~~~~~ai~~a~~~~~ 139 (471)
T 1p8j_A 73 -PDPQPRYTQMNDNRHGTRCAGEVAAVANNG--------VCGVGVAYNARIGGVRMLD----GEVTDAVEARSLGLNPNH 139 (471)
T ss_dssp -SCCCCCCCTTCTTCHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECSS----SCCCHHHHHHHHTSCTTT
T ss_pred -CCCCCccCCCCCCCcHHHHHHHHHeeccCC--------CCCEEECCCCeEEEEEccC----CchhHHHHHHHhhhccCC
Confidence 001111235688999999999999964322 1358999999999999985 345689999999999 99
Q ss_pred CcEEEecCCCCCCCCCCccCCCChHHHHHHHHHH-----cCceEEEecCCCCCCCCC----ccCCCCcEEEEeeeecCcc
Q 003469 301 VDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVK-----AGVFVAQAAGNGGPFPKT----LVSYSPWITTVAAAIDDRR 371 (817)
Q Consensus 301 ~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~-----~Gv~vV~AAGN~G~~~~~----~~~~~~~vitVgA~~~~~~ 371 (817)
++|||||||........ ......+..++.++.+ +|++||+||||+|..... ....++++|+|||++.
T Consensus 140 ~~Vin~S~G~~~~~~~~-~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~--- 215 (471)
T 1p8j_A 140 IHIYSASWGPEDDGKTV-DGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ--- 215 (471)
T ss_dssp CCEEEECCBSCCSSSCC-BCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT---
T ss_pred CeEEEeccCcCCCCCcc-cCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC---
Confidence 99999999975321110 1112334556665553 699999999999975321 1234688999998531
Q ss_pred eeeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcch
Q 003469 372 YKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTAS 451 (817)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~ 451 (817)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCc
Q 003469 452 IKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLM 531 (817)
Q Consensus 452 ~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (817)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHH
Q 003469 532 PILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAAL 611 (817)
Q Consensus 532 ~~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aAL 611 (817)
.+.++.||++||.... ..+|...+||.+|+++.. .++.|..++|||||||||||++||
T Consensus 216 ------~g~~a~~S~~g~~~~~-------~~~~~~~~~g~~i~st~~---------~~~~~~~~sGTS~AaP~VAG~aAL 273 (471)
T 1p8j_A 216 ------FGNVPWYSEACSSTLA-------TTYSSGNQNEKQIVTTDL---------RQKCTESHTGTSASAPLAAGIIAL 273 (471)
T ss_dssp ------TSCCCTTCCBCTTCCE-------EEECCCSTTSCCEEEEET---------TTEEEEEECSHHHHHHHHHHHHHH
T ss_pred ------CCCcccccCCCCcceE-------EeCCCCCCCCCCEEEeeC---------CCCccccCCCcccccchhhhHHHH
Confidence 1267889999998753 567888888899999974 235799999999999999999999
Q ss_pred HHHhCCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCCC
Q 003469 612 VKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPG 677 (817)
Q Consensus 612 l~q~~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 677 (817)
|+|++|+|++++||.+|++||++++......... .........||+|+||+.+|++.+
T Consensus 274 l~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n--------~~g~~~~~~~G~G~vda~~Av~~a 331 (471)
T 1p8j_A 274 TLEANKNLTWRDMQHLVVQTSKPAHLNADDWATN--------GVGRKVSHSYGYGLLDAGAMVALA 331 (471)
T ss_dssp HHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEEC--------TTSCEEBTTTBTCBCCHHHHHHHH
T ss_pred HHhhCCCCCHHHHHHHHHhcCccCCCCCCCceec--------CCCcccCCCCCCEEEcHhHHHHHh
Confidence 9999999999999999999999876432110000 001123468999999999999743
No 30
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=5.1e-46 Score=417.83 Aligned_cols=286 Identities=21% Similarity=0.219 Sum_probs=202.9
Q ss_pred CCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccC
Q 003469 143 VWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAF 222 (817)
Q Consensus 143 ~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~ 222 (817)
.|.. +++|+||+|+|||||||++||+|.++. ....+++..+.
T Consensus 18 aw~~----~~tG~GV~VaVIDTGId~~HpdL~gr~----------------------------~~~~~~~v~~~------ 59 (546)
T 2qtw_B 18 EYQP----PDGGSLVEVYLLDTSIQSDHREIEGRV----------------------------MVTDFENVPEE------ 59 (546)
T ss_dssp ----------CCTTSEEEEEESCCCTTSTTTTTTE----------------------------EEEEEECCCCC------
T ss_pred hccc----CCCCCCcEEEEECCCCCCCChHHcccc----------------------------cccCcccccCC------
Confidence 5654 689999999999999999999999761 01111111000
Q ss_pred CCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHc---
Q 003469 223 NPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD--- 299 (817)
Q Consensus 223 ~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~--- 299 (817)
+.......+.|.+||||||||||+|+. .||||+|+|+.+|++++.+.++.+++++||+|+++.
T Consensus 60 dg~~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~ 125 (546)
T 2qtw_B 60 DGTRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLV 125 (546)
T ss_dssp C-------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhh
Confidence 000001235688999999999999963 599999999999999887667889999999999984
Q ss_pred ---CCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCC-CccCCCCcEEEEeeeecCcceeeE
Q 003469 300 ---GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK-TLVSYSPWITTVAAAIDDRRYKNH 375 (817)
Q Consensus 300 ---g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~-~~~~~~~~vitVgA~~~~~~~~~~ 375 (817)
+++|||||||.. +...+..+++++.++|++||+||||+|.+.. ..|+..+++|+|||++.+...
T Consensus 126 ~~~g~~VINmSlGg~---------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~--- 193 (546)
T 2qtw_B 126 QPVGPLVVLLPLAGG---------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--- 193 (546)
T ss_dssp SCCSCEEEEECEEEE---------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB---
T ss_pred ccCCCeEEEecCCCC---------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc---
Confidence 899999999963 2457889999999999999999999997653 347788999999996422100
Q ss_pred EEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHH
Q 003469 376 LNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKV 455 (817)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~ 455 (817)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCccccc
Q 003469 456 SETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILH 535 (817)
Q Consensus 456 ~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (817)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHh
Q 003469 536 KSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQK 615 (817)
Q Consensus 536 ~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~ 615 (817)
...-+.||++||.+ ||+|||++|+++++.. +..|..++|||||||||||++|||+|+
T Consensus 194 --a~~s~~fSn~G~~v-------------DI~APG~~I~St~~~~--------~~~y~~~SGTSmAAP~VAG~aALlls~ 250 (546)
T 2qtw_B 194 --VTLGTLGTNFGRCV-------------DLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSA 250 (546)
T ss_dssp --CEETTEECCBSTTC-------------CEEEECSSEEEECTTS--------TTCEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred --ccccCCcCCCCCcc-------------eEEecCccEEeeccCC--------CCcEeeeCcCcHHHHHHHHHHHHHHHH
Confidence 00011288888754 9999999999998542 357999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhccccccccCCCccccccchhhhhh-ccccCCCCcccccc--cCcccccC
Q 003469 616 HPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAM-KLVTATPFDYGSGH--VNPRAALD 675 (817)
Q Consensus 616 ~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~G~G~--vn~~~Al~ 675 (817)
+|+|+++|||++|++||.+................+.. ...+.....+|+|+ .++..+..
T Consensus 251 ~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 251 EPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp STTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred CCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 99999999999999999875321110000000000000 01112355688888 77777765
No 31
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=4.8e-46 Score=395.32 Aligned_cols=225 Identities=31% Similarity=0.432 Sum_probs=194.2
Q ss_pred CCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCCCCCC
Q 003469 152 RAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASP 231 (817)
Q Consensus 152 ~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (817)
.+|+||+|||||||||++||+|.++ +...++|.. ..
T Consensus 29 ~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~---------------~~ 64 (279)
T 3f7m_A 29 SAGAGACVYVIDTGVEDTHPDFEGR-----------------------------AKQIKSYAS---------------TA 64 (279)
T ss_dssp TTTTTEEEEEEESCCCTTCGGGTTC-----------------------------EEEEEECSS---------------SS
T ss_pred CCCCCCEEEEEcCCCCCCChhhccc-----------------------------cccccCCCC---------------CC
Confidence 4999999999999999999999975 334444422 12
Q ss_pred CCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcC-------CcEE
Q 003469 232 LDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDG-------VDIL 304 (817)
Q Consensus 232 ~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g-------~dVI 304 (817)
.|.+||||||||||+|+ ..||||+|+|+.+|+++..+.+..+++++|++|+++++ ++||
T Consensus 65 ~d~~gHGT~vAgii~~~--------------~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vi 130 (279)
T 3f7m_A 65 RDGHGHGTHCAGTIGSK--------------TWGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVA 130 (279)
T ss_dssp SCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEE
T ss_pred CCCCCcHHHHHHHHhcC--------------ccccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEE
Confidence 27889999999999996 26999999999999998877788899999999999986 8999
Q ss_pred EecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCCCC-ccCCCCcEEEEeeeecCcceeeEEEeCCCcE
Q 003469 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKT-LVSYSPWITTVAAAIDDRRYKNHLNLGNGKI 383 (817)
Q Consensus 305 n~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~ 383 (817)
|||||.. ....+..+++++.++|++||+||||+|..... .++..+++|+|||++.
T Consensus 131 n~S~g~~---------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 186 (279)
T 3f7m_A 131 SMSLGGG---------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS--------------- 186 (279)
T ss_dssp EECCCEE---------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------
T ss_pred EeCCCcC---------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC---------------
Confidence 9999963 34678899999999999999999999986543 3678899999998531
Q ss_pred EEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchHHHHHHHHHhcC
Q 003469 384 LAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLG 463 (817)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~G 463 (817)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcccccCCCCcccc
Q 003469 464 AAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVAL 543 (817)
Q Consensus 464 a~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 543 (817)
.+.++.
T Consensus 187 --------------------------------------------------------------------------~~~~~~ 192 (279)
T 3f7m_A 187 --------------------------------------------------------------------------NDVRST 192 (279)
T ss_dssp --------------------------------------------------------------------------TSBBCT
T ss_pred --------------------------------------------------------------------------CCCCCC
Confidence 126788
Q ss_pred ccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHHHHHHHHhCCCCCHHH
Q 003469 544 FSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAA 623 (817)
Q Consensus 544 fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~ 623 (817)
||++||.. ||+|||++|++++ .++.|..++|||||||||||++|||+|++|+ ++++
T Consensus 193 ~S~~g~~~-------------di~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~ 248 (279)
T 3f7m_A 193 FSNYGRVV-------------DIFAPGTSITSTW----------IGGRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGA 248 (279)
T ss_dssp TCCBSTTC-------------CEEEECSSEEEEC----------GGGCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTT
T ss_pred CCCCCCCC-------------eEEECCCCeEeec----------CCCCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHH
Confidence 99999976 9999999999998 4567999999999999999999999999999 9999
Q ss_pred HHHHHhccccccc
Q 003469 624 IKSALMTTTTKLD 636 (817)
Q Consensus 624 ik~~L~~TA~~~~ 636 (817)
||.+|++||++..
T Consensus 249 v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 249 MCGRIQTLSTKNV 261 (279)
T ss_dssp HHHHHHHHSEESC
T ss_pred HHHHHHHhccccc
Confidence 9999999999854
No 32
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.9e-45 Score=430.93 Aligned_cols=152 Identities=20% Similarity=0.218 Sum_probs=104.0
Q ss_pred CCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCCCCC
Q 003469 151 DRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFAS 230 (817)
Q Consensus 151 ~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~ 230 (817)
+++|+||+|||||||||++||+|.++. ..+.++|..+ .++..
T Consensus 66 g~~G~gV~VaViDtGid~~Hpdl~~~~----------------------------~~~~~~~~~~----------~~d~~ 107 (600)
T 2oxa_A 66 GVLGHGVNVAVVDDGLAIAHPDLADNV----------------------------RPGSKNVVTG----------SDDPT 107 (600)
T ss_dssp TCSCTTCEEEEESSCCCTTCTTTGGGB----------------------------CSCCBCTTTC----------SSCCC
T ss_pred CCCCCCcEEEEecCCcCCCCcchhhcc----------------------------ccCceeccCC----------CCCCC
Confidence 789999999999999999999999751 1112333321 01223
Q ss_pred CCC-CCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCC-HHHHHHHHHHHHHcCCcEEEecC
Q 003469 231 PLD-GDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGF-VADVVAAIDQAVHDGVDILSLSV 308 (817)
Q Consensus 231 ~~D-~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~-~~di~~ai~~a~~~g~dVIn~Sl 308 (817)
|.| ++||||||||||||. .++ ..+.||||+|+|+.+|+++..+... ...++++...+..++++||||||
T Consensus 108 p~d~~~gHGT~vAGiiaa~-~n~--------~g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~ 178 (600)
T 2oxa_A 108 PTDPDTGHGTSVSGIIAAV-DNA--------IGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSY 178 (600)
T ss_dssp CCSTTCCHHHHHHHHHHCC-SSS--------SSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECC
T ss_pred CCCCCCCCccHHHHHhhcc-cCC--------CcceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEec
Confidence 444 789999999999997 321 1368999999999999998764443 23444544457788999999999
Q ss_pred CCCCCCCCCccCCCChHHHHH-HH--HHHcCceEEEecCCCCCC
Q 003469 309 GPNSPPATTKTTFLNPFDVTL-LA--AVKAGVFVAQAAGNGGPF 349 (817)
Q Consensus 309 G~~~~~~~~~~~~~~~~~~a~-~~--a~~~Gv~vV~AAGN~G~~ 349 (817)
|...........+...+..++ .. +.++|++||+||||+|..
T Consensus 179 G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~ 222 (600)
T 2oxa_A 179 RMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNK 222 (600)
T ss_dssp CCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSE
T ss_pred cCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCcc
Confidence 986533222111112222222 22 446799999999999874
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=4.6e-45 Score=418.15 Aligned_cols=286 Identities=20% Similarity=0.225 Sum_probs=211.2
Q ss_pred CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhcc
Q 003469 142 GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA 221 (817)
Q Consensus 142 ~~w~~~~~~~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~ 221 (817)
.+|.. +++|+||+|||||||||++||+|.++. + ..++++|.++.
T Consensus 45 ~aw~~----g~tG~gv~VaViDtGvd~~Hpdl~~~~---------~------------------~~~~~d~~~~~----- 88 (503)
T 2id4_A 45 DLWYN----NITGAGVVAAIVDDGLDYENEDLKDNF---------C------------------AEGSWDFNDNT----- 88 (503)
T ss_dssp HHHHT----TCSCTTCEEEEEESCCCTTSTTTTTTB---------C------------------GGGCEETTTTB-----
T ss_pred HHHhc----CCCCCCeEEEEEeCCCCCCChhHhhcc---------c------------------ccCcccCCCCC-----
Confidence 45665 689999999999999999999999861 1 01234443320
Q ss_pred CCCCCCCCCCCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHHcCC
Q 003469 222 FNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGV 301 (817)
Q Consensus 222 ~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~~g~ 301 (817)
.+..+..|++||||||||||||...++ ..+.||||+|+|+.+|++.. .+..+++++||+|+++++
T Consensus 89 ----~~~~p~~d~~gHGT~vAGiiaa~~~n~--------~~~~GvAp~a~i~~~rv~~~--~~~~~~~~~ai~~a~~~~- 153 (503)
T 2id4_A 89 ----NLPKPRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSG--DITTEDEAASLIYGLDVN- 153 (503)
T ss_dssp ----SCCCCCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTS--CCCHHHHHHHTTTTTTTC-
T ss_pred ----CCCCCCCCCCChHHHHHHHHHhccCCC--------CCcEEECCCCEEEEEEeeCC--CCChHHHHHHHHhHhhcC-
Confidence 011123578899999999999975322 13589999999999999974 467788999999999998
Q ss_pred cEEEecCCCCCCCCCCccCCCChHHHHHHHHH-----HcCceEEEecCCCCCCCC--Ccc--CCCCcEEEEeeeecCcce
Q 003469 302 DILSLSVGPNSPPATTKTTFLNPFDVTLLAAV-----KAGVFVAQAAGNGGPFPK--TLV--SYSPWITTVAAAIDDRRY 372 (817)
Q Consensus 302 dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~-----~~Gv~vV~AAGN~G~~~~--~~~--~~~~~vitVgA~~~~~~~ 372 (817)
+|||||||........ ......+..++.++. .+|++||+||||+|.... ..+ ..++++|+|||++.
T Consensus 154 ~Iin~S~G~~~~~~~~-~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~---- 228 (503)
T 2id4_A 154 DIYSCSWGPADDGRHL-QGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH---- 228 (503)
T ss_dssp SEEEECEESCCSSSCC-BCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT----
T ss_pred CEEEeCCCcCCCCccc-cCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC----
Confidence 9999999975321111 112335667777766 479999999999997532 222 25678999998531
Q ss_pred eeEEEeCCCcEEEeeecCCCCCCCceEEEEEcccccccccccccCCCCCCCccccccccccccEEEEecccccccCcchH
Q 003469 373 KNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASI 452 (817)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~~~~~~~~~~~g~~~~ 452 (817)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcCceEEEEeecCCCCCCccCCCCCCCCeEEEcCchhHHHHHHHHhccCCcCCcceeEeeeeeeEecCCCcc
Q 003469 453 KKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMP 532 (817)
Q Consensus 453 ~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (817)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCccccccCCCCCCCCCCcCCccccCCcccc----CCCcEEEeeCCCCCCCCCccCCceEeecCccchhHHHHHH
Q 003469 533 ILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILA----PGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGI 608 (817)
Q Consensus 533 ~~~~~~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~A----PG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~ 608 (817)
.+.++.||++||.. |++| ||..|+++.. .++.|..++|||||||||||+
T Consensus 229 -----~~~~a~~S~~g~~~-------------~~~a~~~gpG~~I~st~~---------~~~~~~~~sGTS~AaP~VAG~ 281 (503)
T 2id4_A 229 -----KDLHPPYSEGCSAV-------------MAVTYSSGSGEYIHSSDI---------NGRCSNSHGGTSAAAPLAAGV 281 (503)
T ss_dssp -----TSCCCTTCCCCTTE-------------EEEEECSBTTBCEEEECS---------TTCEEEEECSHHHHHHHHHHH
T ss_pred -----CCCcCCcCCCCCcc-------------eEeecCCCCCCceEeecC---------CCCceecCCCccccchhhhHH
Confidence 12678899999987 6666 9999999853 346799999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHhccccccccCCCccccccchhhhhhccccCCCCcccccccCcccccCCC
Q 003469 609 AALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPG 677 (817)
Q Consensus 609 aALl~q~~p~ls~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 677 (817)
+|||+|++|+|++++||.+|++||+++.....+- +... .........||+|+||+.+|++..
T Consensus 282 aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~-~~~~------~~g~~~~~~~G~G~vda~~Av~~a 343 (503)
T 2id4_A 282 YTLLLEANPNLTWRDVQYLSILSAVGLEKNADGD-WRDS------AMGKKYSHRYGFGKIDAHKLIEMS 343 (503)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGC-CEEC------SSSSEEBTTTBTCBCCHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCC-ceec------CCCCccCcccCCcEecHHHHHHHH
Confidence 9999999999999999999999999876431100 0000 001122457999999999999743
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=6.6e-43 Score=411.24 Aligned_cols=153 Identities=20% Similarity=0.251 Sum_probs=106.3
Q ss_pred CCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCccCCCceeeeeehhHHHHhhccCCCCCCCCC
Q 003469 151 DRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFAS 230 (817)
Q Consensus 151 ~~tG~GV~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~~~~~~~~~~~~~~~~~~~~~~~~ 230 (817)
+++|+||+|||||||||++||||.++. + .+.++|..+ ..+..+
T Consensus 66 g~tG~GV~VaViDtGid~~HpDL~~n~---------~-------------------~~~~~~~~~---------~~dp~p 108 (600)
T 3hjr_A 66 GVLGQGVNVAVVDDGLAIAHPDLADNV---------R-------------------PGSKNVVTG---------SDDPTP 108 (600)
T ss_dssp TCSCTTCEEEEESSCCCTTCTTTGGGB---------C-------------------SCCBCTTTS---------SSCCCC
T ss_pred CCCCCCeEEEEEcCCCCCCChhHhhcc---------c-------------------cCcceeecC---------CCCCCC
Confidence 799999999999999999999999761 1 111222211 011122
Q ss_pred CCCCCCCCccchhhhccCCCccccccccCccceeeccCCCcEEEEEeeecCCCCCHHHHHHHH-HHHHHcCCcEEEecCC
Q 003469 231 PLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAI-DQAVHDGVDILSLSVG 309 (817)
Q Consensus 231 ~~D~~gHGThVAGiiag~~~~~~~~~g~~~g~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai-~~a~~~g~dVIn~SlG 309 (817)
..|.+||||||||||||..+ +. .+.||||+|+|+.+|++++.+.+..++++.|+ +++..++++|||||||
T Consensus 109 ~~~~~gHGThVAGiIAa~~n------~~---g~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G 179 (600)
T 3hjr_A 109 TDPDTAHGTSVSGIIAAVDN------AI---GTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYG 179 (600)
T ss_dssp CSTTCCHHHHHHHHHHCCSS------SS---SCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCC
T ss_pred CCCCCChHHHHHHHHhEeCC------CC---CcEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccC
Confidence 34578999999999998632 11 35899999999999999987777888887776 7788899999999999
Q ss_pred CCCCCCCCc-cCCCChHHHHHHHH--HHcCceEEEecCCCCCC
Q 003469 310 PNSPPATTK-TTFLNPFDVTLLAA--VKAGVFVAQAAGNGGPF 349 (817)
Q Consensus 310 ~~~~~~~~~-~~~~~~~~~a~~~a--~~~Gv~vV~AAGN~G~~ 349 (817)
......... ......+..++..+ ..+|+++|+||||.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~ 222 (600)
T 3hjr_A 180 MSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNK 222 (600)
T ss_dssp CCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSE
T ss_pred ccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCcccc
Confidence 754322110 00111222223222 24799999999998653
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=2.5e-25 Score=255.12 Aligned_cols=100 Identities=30% Similarity=0.346 Sum_probs=78.8
Q ss_pred ceeeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHH---cCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCce
Q 003469 262 RASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH---DGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVF 338 (817)
Q Consensus 262 ~~~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~---~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~ 338 (817)
.+.||||+|+|+.|++.+ ..++++++|+||++ ++++|||||||..... ....+.+.++.++.+|..+||+
T Consensus 273 ~~~gvAp~a~i~~~~~~~-----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~--~~~~~~~~~~~~~~~a~~~Gi~ 345 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAPN-----TDAGFLNAITTAVHDPTHKPSIVSISWGGPEDS--WAPASIAAMNRAFLDAAALGVT 345 (552)
T ss_dssp HHHHHCTTSEEEEEECCS-----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGG--SCHHHHHHHHHHHHHHHHTTCE
T ss_pred hhhccCCCCeEEEEEcCC-----CCchHHHHHHHHHhcccCCCCEEEecccCCccc--CCHHHHHHHHHHHHHHHhCCeE
Confidence 368999999999998732 45689999999998 7999999999975321 0011234677888888999999
Q ss_pred EEEecCCCCCCC--------CCccCCCCcEEEEeeeec
Q 003469 339 VAQAAGNGGPFP--------KTLVSYSPWITTVAAAID 368 (817)
Q Consensus 339 vV~AAGN~G~~~--------~~~~~~~~~vitVgA~~~ 368 (817)
||+||||+|... ..+++.+|+|++|||++.
T Consensus 346 vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 346 VLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 999999999653 345678999999999863
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.84 E-value=1.2e-21 Score=213.93 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=79.7
Q ss_pred eeccCCCcEEEEEeeecCCCCCHHHHHHHHHHHHH-cCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEe
Q 003469 264 SGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVH-DGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQA 342 (817)
Q Consensus 264 ~GVAP~A~L~~~kv~~~~~~~~~~di~~ai~~a~~-~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~A 342 (817)
..+||+++++.|++.+.. .+..++++.+|+||++ ++++|||||||....... ...+.+.++.++.+|..+||+||+|
T Consensus 90 g~~aP~a~~~~~~~~~~~-~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~-~~~~~~~~~~~~~~a~~~Gitvv~A 167 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQS-ASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADAN-ADGTLQAEDRIFATAAAQGQTFSVS 167 (372)
T ss_dssp HHTTSCEEEEEEEEECTT-SSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHH-HTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhcCCCCcEEEEEeCCCC-CcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCc-hHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 347899999999998653 3567789999999998 899999999997421000 0112346778888888999999999
Q ss_pred cCCCCCCCC-------------CccCCCCcEEEEeeeec
Q 003469 343 AGNGGPFPK-------------TLVSYSPWITTVAAAID 368 (817)
Q Consensus 343 AGN~G~~~~-------------~~~~~~~~vitVgA~~~ 368 (817)
|||+|...+ ..|+.+|+|++||+++.
T Consensus 168 sGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 168 SGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp CCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred ECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 999997532 34678999999999863
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.02 E-value=8.5e-10 Score=125.49 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=55.4
Q ss_pred HHHHHHHHHH--HcCCcEEEecCCCCCCCCCCccCCCChHHHHHHHHHHcCceEEEecCCCCCCC----------CCccC
Q 003469 288 DVVAAIDQAV--HDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP----------KTLVS 355 (817)
Q Consensus 288 di~~ai~~a~--~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~----------~~~~~ 355 (817)
.++..+++.. .+-++|||+|||....... ..+.+.+..++.++..+||.|++|+||+|... ...|+
T Consensus 284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~--~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pa 361 (544)
T 3edy_A 284 PFLQWLMLLSNESALPHVHTVSYGDDEDSLS--SAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPA 361 (544)
T ss_dssp HHHHHHHHHTTCSSCCSEEEEECCEEGGGSC--HHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETT
T ss_pred cHHHHHHHHhccCCCCcEEEecCCCcccccC--HHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcC
Confidence 3444444433 2468999999997532110 12334566777888899999999999999753 24567
Q ss_pred CCCcEEEEeeeec
Q 003469 356 YSPWITTVAAAID 368 (817)
Q Consensus 356 ~~~~vitVgA~~~ 368 (817)
.+|+|++||+++.
T Consensus 362 s~P~VtaVGgT~l 374 (544)
T 3edy_A 362 SSPYVTTVGGTSF 374 (544)
T ss_dssp TCTTSEEEEEEEE
T ss_pred CCCcEEEEeeeec
Confidence 8999999999863
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.59 E-value=1.7e-07 Score=78.48 Aligned_cols=47 Identities=23% Similarity=0.280 Sum_probs=42.6
Q ss_pred CceEEEEeccccceEEEEcCHHHHHHHHcCCCceEEEccceeccccCC
Q 003469 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTH 132 (817)
Q Consensus 85 ~~~~~~~y~~~~ng~sv~~~~~~~~~L~~~p~V~~V~~~~~~~~~~~~ 132 (817)
..++.++|.. |+||+++++++++++|+++|+|.+||+++.++++++.
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 4678999998 9999999999999999999999999999999887653
No 39
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.58 E-value=2.1e-07 Score=83.32 Aligned_cols=44 Identities=30% Similarity=0.388 Sum_probs=41.0
Q ss_pred CceEEEEeccccceEEEEcCHHHHHHHHcCCCceEEEccceecc
Q 003469 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRR 128 (817)
Q Consensus 85 ~~~~~~~y~~~~ng~sv~~~~~~~~~L~~~p~V~~V~~~~~~~~ 128 (817)
..++.++|.+.||||+++++++++++|+++|+|.+||+++.++.
T Consensus 70 ~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 70 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp CCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 46789999999999999999999999999999999999998764
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.45 E-value=7.2e-07 Score=80.75 Aligned_cols=44 Identities=30% Similarity=0.388 Sum_probs=40.9
Q ss_pred CceEEEEeccccceEEEEcCHHHHHHHHcCCCceEEEccceecc
Q 003469 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRR 128 (817)
Q Consensus 85 ~~~~~~~y~~~~ng~sv~~~~~~~~~L~~~p~V~~V~~~~~~~~ 128 (817)
..++.++|++.||||++++++++++.|+++|+|.+|++++.++.
T Consensus 80 g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 80 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 46889999999999999999999999999999999999998764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.40 E-value=1.1e-06 Score=72.38 Aligned_cols=42 Identities=24% Similarity=0.287 Sum_probs=37.2
Q ss_pred eEEEEe-ccccceEEEEcCHHHHHHHHcC--CCceEEEccceecc
Q 003469 87 KKLYSY-KHLINGFAVHITPDQAEILQRA--PGVKSVERDWKVRR 128 (817)
Q Consensus 87 ~~~~~y-~~~~ng~sv~~~~~~~~~L~~~--p~V~~V~~~~~~~~ 128 (817)
++.+.| ..+|+||++.++++.+++|+++ |.|.+||+++.++.
T Consensus 31 ~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 31 TITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp CCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 566777 4799999999999999999999 89999999988764
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.69 E-value=0.00013 Score=70.94 Aligned_cols=85 Identities=16% Similarity=0.171 Sum_probs=62.7
Q ss_pred CCCCCCCccccccc------cccccEEEEecccccccCc-chHHHHHHHHHhcCceEEEEeecCCC--CCCccC-CCCCC
Q 003469 417 SASDCQRPEVLNKN------LVEGNILLCGYSFNFVTGT-ASIKKVSETAKSLGAAGFVLAVENVS--PGTKFD-PVPVG 486 (817)
Q Consensus 417 ~~~~c~~~~~~~~~------~~~gki~~~~~~~~~~~g~-~~~~~~~~~~~~~Ga~~~i~~~~~~~--~~~~~~-~~~~~ 486 (817)
...+|.....+... ..+|+|+|++| |. |.|.+|+.+|+++||.++|+||+... ....+. .....
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~R------G~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~ 155 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQR------GGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVD 155 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEES------CTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCS
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEEC------CCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCc
Confidence 45788765433221 24789999987 67 99999999999999999999998421 111222 22357
Q ss_pred CCeEEEcCchhHHHHHHHHhcc
Q 003469 487 IPGILITDVTKSMDLVDYYNTS 508 (817)
Q Consensus 487 ~p~~~i~~~~~g~~l~~~~~~~ 508 (817)
||.++|.. ++|+.|++.+.+.
T Consensus 156 IPsv~Is~-~~G~~L~~~L~~G 176 (194)
T 3icu_A 156 IVAIMIGN-LKGTKILQSIQRG 176 (194)
T ss_dssp SEEEEECH-HHHHHHHHHHHTT
T ss_pred eeEEEECH-HHHHHHHHHHHCC
Confidence 99999988 9999999998754
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.36 E-value=0.005 Score=48.61 Aligned_cols=43 Identities=28% Similarity=0.445 Sum_probs=38.9
Q ss_pred CceEEEEeccccceEEEEcCHHHHHHHHcCCCceEEEccceecc
Q 003469 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRR 128 (817)
Q Consensus 85 ~~~~~~~y~~~~ng~sv~~~~~~~~~L~~~p~V~~V~~~~~~~~ 128 (817)
+.++.++|. .++++++++|++.++.|+++|+|.+||+|..++.
T Consensus 22 gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 22 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp TCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred CCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 678888885 8999999999999999999999999999987754
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.69 E-value=0.025 Score=50.87 Aligned_cols=73 Identities=19% Similarity=0.267 Sum_probs=54.0
Q ss_pred ceEEEEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEecCCCceEEEEEEEEeCCCcEEEEeE
Q 003469 732 KTQVVTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVRSVTGTYSFGEICMKGSRGHKVNIPV 810 (817)
Q Consensus 732 ~~~~~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~~~~~~~~G~i~~~~~~~~~l~iP~ 810 (817)
.+++.+.+|+|.|+. ..|++... . .++++|.+-+|+||++..++|+|.+... ..+++.+.+.-+++..+.++.
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~--~--~F~i~P~~g~L~pg~~~~i~V~F~P~~~--g~~~~~l~v~~~~g~~~~v~L 114 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTC--R--PFSIEPAIGTLNVGESMQLEVEFEPQSV--GDHSGRLIVCYDTGEKVFVSL 114 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECC--T--TEEEESSEEEECTTCEEEEEEEECCSSS--BCCCCBCEEEESSSCEECCEE
T ss_pred CeEEEEEEEEECCCCCEEEEEecC--C--CeEEECCcCEECCCCEEEEEEEEEcCCC--ccEEEEEEEEECCCCEEEEEE
Confidence 455566789999998 77766642 2 3677899999999999999999998743 235566777656666666654
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=93.77 E-value=0.15 Score=56.25 Aligned_cols=75 Identities=15% Similarity=0.114 Sum_probs=55.9
Q ss_pred cccccccccccEEEEecccccccCcchHHHHHHHHHhcCceEEEEeecCCCCCC-ccC-CCCCCCCeEEEcCchhHHHHH
Q 003469 425 EVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGT-KFD-PVPVGIPGILITDVTKSMDLV 502 (817)
Q Consensus 425 ~~~~~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~-~~~-~~~~~~p~~~i~~~~~g~~l~ 502 (817)
.++...+++|||+++.+ |.|.+.+|+.+|+++||.++|+|++...... .+. .....+|.+.+.. ++++.|.
T Consensus 106 ~D~~~~dv~GkIvlv~~------g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~-~~a~~L~ 178 (421)
T 2ek8_A 106 ADVAGKDLNGKIALIQR------GNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITK-QEGDALA 178 (421)
T ss_dssp TTTTTSCCTTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECH-HHHHHHH
T ss_pred hhcCCCCcCceEEEEeC------CCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCH-HHHHHHH
Confidence 34444578999999976 5678999999999999999999998632211 111 1345789988776 7888888
Q ss_pred HHHh
Q 003469 503 DYYN 506 (817)
Q Consensus 503 ~~~~ 506 (817)
..+.
T Consensus 179 ~~l~ 182 (421)
T 2ek8_A 179 ANLR 182 (421)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8773
No 46
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=90.78 E-value=1.4 Score=39.02 Aligned_cols=52 Identities=13% Similarity=0.264 Sum_probs=42.7
Q ss_pred EEEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEecC
Q 003469 735 VVTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVRSV 787 (817)
Q Consensus 735 ~~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~~ 787 (817)
..+..|.|.... .+|.+++....++.+. .+..|+|+||+.+++.|.+..+..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVEPGEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEECTTCEEEEEEEEEECGG
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEECCCCEEEEEEEEEEChH
Confidence 466689999999 9999999876665553 255799999999999999999764
No 47
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=90.00 E-value=1.6 Score=39.85 Aligned_cols=81 Identities=11% Similarity=0.112 Sum_probs=58.1
Q ss_pred ceEEEEEEEEEcCCC-ceEEEEEEcC----CCcEEEEecCeEEEcCCCEEEEEEEEEEecC-------CCceEEEEEEEE
Q 003469 732 KTQVVTRTVTNVAEE-ETYSMSARMQ----PAIAIEVNPPAMTLKPGASRKFTVTLTVRSV-------TGTYSFGEICMK 799 (817)
Q Consensus 732 ~~~~~~~tv~n~~~~-~ty~~~~~~~----~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~~-------~~~~~~G~i~~~ 799 (817)
..++-+.+|+|.|.. .+|.+..... ..--++++|.+-+|+||++.+++|++.+.+. ....++--|++.
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 334556689999998 8888874321 1123677899999999999999999987542 012345667777
Q ss_pred eCCCcEEEEeEEE
Q 003469 800 GSRGHKVNIPVIA 812 (817)
Q Consensus 800 ~~~~~~l~iP~~~ 812 (817)
=.+|.+..||+.+
T Consensus 123 Ve~G~d~fI~v~g 135 (140)
T 3qbt_B 123 LDRGKDYFLTISG 135 (140)
T ss_dssp ETTSCEEEEEEEE
T ss_pred eecCCcEEEEEec
Confidence 6788888999654
No 48
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=89.78 E-value=0.68 Score=51.30 Aligned_cols=29 Identities=24% Similarity=0.313 Sum_probs=25.2
Q ss_pred CCccccccCCCCCCCCCCcCCccccCCccccCCCcEEEeeCC
Q 003469 538 APQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSP 579 (817)
Q Consensus 538 ~~~~a~fSS~Gp~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~ 579 (817)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 183 ~~~~~~~S~~g~~v-------------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV-------------EISGPGEAILSTVTV 211 (441)
T ss_dssp TCCBCTTSCCCTTE-------------EEEEECSSEEEECST
T ss_pred CCCCCccccCCCce-------------EEEeccCCeeccccC
Confidence 45799999999865 999999999999853
No 49
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.52 E-value=1.6 Score=37.89 Aligned_cols=78 Identities=8% Similarity=0.132 Sum_probs=51.6
Q ss_pred CcEEEeee--cceEEEEEEEEEcCCC-ceEEEEEEc-CCCcEEEEecCeEEEcCCCEEEEEEEEEEecCCCceEEEEEEE
Q 003469 723 PSITVAHL--VKTQVVTRTVTNVAEE-ETYSMSARM-QPAIAIEVNPPAMTLKPGASRKFTVTLTVRSVTGTYSFGEICM 798 (817)
Q Consensus 723 ps~~~~~~--~~~~~~~~tv~n~~~~-~ty~~~~~~-~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~~~~~~~~G~i~~ 798 (817)
..+.++.+ ....+.+.+++|.|+. ..|++.... ..+..++++|.+=+|+||++.+|+|+|.+... + .++=.|++
T Consensus 15 ~~ldFG~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~~-g-~f~~~i~v 92 (112)
T 2e6j_A 15 ELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSSIIL-G-NFEEEFLV 92 (112)
T ss_dssp SEEEEEEEESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEECCCCC-E-EEEEEECE
T ss_pred ccEecEeEEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEECCCc-c-eEEEEEEE
Confidence 33444443 2334455689999998 888773211 11234677899999999999999999998642 3 34455777
Q ss_pred EeCC
Q 003469 799 KGSR 802 (817)
Q Consensus 799 ~~~~ 802 (817)
..++
T Consensus 93 ~~~g 96 (112)
T 2e6j_A 93 NVNG 96 (112)
T ss_dssp EESS
T ss_pred EECC
Confidence 6543
No 50
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.19 E-value=0.19 Score=62.04 Aligned_cols=24 Identities=29% Similarity=0.610 Sum_probs=22.5
Q ss_pred CCCCCceEEEEecceecCCCCCCC
Q 003469 151 DRAGEDIVIGFVDSGIYPHHPSFG 174 (817)
Q Consensus 151 ~~tG~GV~VaVIDtGid~~Hp~f~ 174 (817)
.|.|+||+|||+|||||+.+|.|.
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 489999999999999999999994
No 51
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=81.56 E-value=6.4 Score=35.14 Aligned_cols=50 Identities=14% Similarity=0.114 Sum_probs=37.5
Q ss_pred ceEEEEEEEEEcCCC--ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEE
Q 003469 732 KTQVVTRTVTNVAEE--ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTV 784 (817)
Q Consensus 732 ~~~~~~~tv~n~~~~--~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~ 784 (817)
...+++.+|+|.|.. ..|++.+... |-.+ ....+.|++|++++|+++..+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyvn-g~~v--~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYIN-GTLY--KNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEET-TEEE--EEEEEEECTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEEC-CEEE--eeEEeccCCCCeEEEEEEEEc
Confidence 456788899999988 7788887653 3222 233568999999999999874
No 52
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=81.39 E-value=3.2 Score=45.88 Aligned_cols=78 Identities=12% Similarity=0.147 Sum_probs=50.6
Q ss_pred cccccccEEEEeccccc-ccC--cchHHHH----HHHHHhcCceEEEEeecCCCCC------C-ccCCCCCCCCeEEEcC
Q 003469 429 KNLVEGNILLCGYSFNF-VTG--TASIKKV----SETAKSLGAAGFVLAVENVSPG------T-KFDPVPVGIPGILITD 494 (817)
Q Consensus 429 ~~~~~gki~~~~~~~~~-~~g--~~~~~~~----~~~~~~~Ga~~~i~~~~~~~~~------~-~~~~~~~~~p~~~i~~ 494 (817)
..+++|||+++.++... ..+ -+.+..+ ..+|.++||.++|++++..... . ........||.+.|..
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 45899999999874211 000 0122233 4579999999999999743221 1 1112245799999988
Q ss_pred chhHHHHHHHHhc
Q 003469 495 VTKSMDLVDYYNT 507 (817)
Q Consensus 495 ~~~g~~l~~~~~~ 507 (817)
++++.|...+..
T Consensus 204 -~da~~L~~~l~~ 215 (444)
T 3iib_A 204 -PDADLINAMLKR 215 (444)
T ss_dssp -HHHHHHHHHHTT
T ss_pred -HHHHHHHHHHhC
Confidence 899999888764
No 53
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=80.37 E-value=1.2 Score=51.99 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=34.0
Q ss_pred cccccccEEEEecccccccCcchHHHHHHHHHhcCceEEEEeec
Q 003469 429 KNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVE 472 (817)
Q Consensus 429 ~~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~ 472 (817)
..+++|||+|+.+ |.|.+.+|+.+|+++||.|+|+|++
T Consensus 150 ~~~v~GkIvlv~~------G~~~~~~Kv~~A~~~GA~gviiy~d 187 (707)
T 3fed_A 150 GINCTGKIVIARY------GKIFRGNKVKNAMLAGAIGIILYSD 187 (707)
T ss_dssp CCCCTTCEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCCeEEEEEC------CCCCHhHHHHHHHHCCCEEEEEEcC
Confidence 3478999999986 5688999999999999999999986
No 54
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=79.32 E-value=1.7 Score=50.30 Aligned_cols=39 Identities=23% Similarity=0.414 Sum_probs=34.8
Q ss_pred ccccccEEEEecccccccCcchHHHHHHHHHhcCceEEEEeecCC
Q 003469 430 NLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENV 474 (817)
Q Consensus 430 ~~~~gki~~~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~~~~~ 474 (817)
.+++|||+++.+ |.|.+..|+.+|+++||.|+|+|++..
T Consensus 128 vdv~GkIvlv~~------g~~~~~~K~~~A~~~GA~gvii~~~~~ 166 (640)
T 3kas_A 128 TPVNGSIVIVRA------GKITFAEKVANAESLNAIGVLIYMDQT 166 (640)
T ss_dssp SCCTTSEEEEES------CSSCHHHHHHHHHTTTCSEEEEECCTT
T ss_pred cccCCcEEEEec------CCCCHHHHHHHHHHCCCeEEEEEeccc
Confidence 479999999986 578899999999999999999999764
No 55
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=78.27 E-value=13 Score=39.63 Aligned_cols=81 Identities=11% Similarity=0.141 Sum_probs=56.9
Q ss_pred ceEEEEEEEEEcCCC-ceEEEEEEcCCCc----EEEEecCeEEEcCCCEEEEEEEEEEecCC-------CceEEEEEEEE
Q 003469 732 KTQVVTRTVTNVAEE-ETYSMSARMQPAI----AIEVNPPAMTLKPGASRKFTVTLTVRSVT-------GTYSFGEICMK 799 (817)
Q Consensus 732 ~~~~~~~tv~n~~~~-~ty~~~~~~~~~~----~v~~~~~~~tv~~g~~~~~~v~~~~~~~~-------~~~~~G~i~~~ 799 (817)
...+-+.+|+|+|.. .+|.+........ =++++|.+-+|+||++.+++|++.+.... ....+--+++.
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL~ 125 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 125 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEECHHHHHHHhcCccccceEEEEE
Confidence 344556689999998 8888865432221 27778999999999999999999887621 11234456676
Q ss_pred eCCCcEEEEeEEE
Q 003469 800 GSRGHKVNIPVIA 812 (817)
Q Consensus 800 ~~~~~~l~iP~~~ 812 (817)
=.+|.+.-||.-+
T Consensus 126 ve~G~d~FI~v~~ 138 (366)
T 3qis_A 126 LDRGKDYFLTISG 138 (366)
T ss_dssp ETTSCEEEEEEEE
T ss_pred EeCCCcEEEEecc
Confidence 6677777777544
No 56
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=74.70 E-value=20 Score=35.06 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=51.0
Q ss_pred EEEEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEecCCC-ceEEEEEEEEeC---CCc--EE
Q 003469 734 QVVTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVRSVTG-TYSFGEICMKGS---RGH--KV 806 (817)
Q Consensus 734 ~~~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~~~~-~~~~G~i~~~~~---~~~--~l 806 (817)
.+.+.+++|.|+. .+++..+. +.- +++.+..-+++||++.+++|+++...... ....+.|++... ++. ..
T Consensus 21 ~~~~~~i~N~g~~pl~i~~~~~-p~~--~~~~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~~~~ 97 (220)
T 2qsv_A 21 GVVRLVVNNTDESDLQVAVVSL-PSF--VSLDDRAFRLQAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKKAVD 97 (220)
T ss_dssp CEEEEEEEECSSSCEEEEEEEC-CTT--EECSCCEEEECSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCEEEE
T ss_pred ceEEEEEEeCCCCceEEEeccC-CCc--eEeeeCcceeCCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCccccc
Confidence 3456689999998 66665543 333 44456778999999999999998876432 345677888763 222 33
Q ss_pred EEeEEE
Q 003469 807 NIPVIA 812 (817)
Q Consensus 807 ~iP~~~ 812 (817)
.||+..
T Consensus 98 ~i~v~g 103 (220)
T 2qsv_A 98 SVMVSL 103 (220)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666654
No 57
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=73.35 E-value=20 Score=31.48 Aligned_cols=74 Identities=11% Similarity=0.024 Sum_probs=44.9
Q ss_pred ceEEEEEEEEEcCCC-ce--------EEEEEEcCCCcEEE---------EecCeEEEcCCCEEEEEEEEEEecCCCc-eE
Q 003469 732 KTQVVTRTVTNVAEE-ET--------YSMSARMQPAIAIE---------VNPPAMTLKPGASRKFTVTLTVRSVTGT-YS 792 (817)
Q Consensus 732 ~~~~~~~tv~n~~~~-~t--------y~~~~~~~~~~~v~---------~~~~~~tv~~g~~~~~~v~~~~~~~~~~-~~ 792 (817)
+.-.++.+|+|.++. .+ |.+.+....|-.|- -.-...+|+||+++++..++..+...+. .+
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl 97 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEV 97 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEE
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEE
Confidence 455678899999886 43 33334333343222 0124789999999999999983222333 35
Q ss_pred EEEEEEEeCCCcE
Q 003469 793 FGEICMKGSRGHK 805 (817)
Q Consensus 793 ~G~i~~~~~~~~~ 805 (817)
.++++-+......
T Consensus 98 ~a~l~~~~~~~~~ 110 (120)
T 3isy_A 98 KVTFKGRAENLKQ 110 (120)
T ss_dssp EEEECCEETTCCC
T ss_pred EEEEEeeecccee
Confidence 6777666544333
No 58
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=68.77 E-value=17 Score=35.59 Aligned_cols=76 Identities=14% Similarity=0.251 Sum_probs=46.5
Q ss_pred EEEeeec-ceEEEEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEecCCCc-e--EEEEEEEE
Q 003469 725 ITVAHLV-KTQVVTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVRSVTGT-Y--SFGEICMK 799 (817)
Q Consensus 725 ~~~~~~~-~~~~~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~~~~~-~--~~G~i~~~ 799 (817)
+.++.+. ...+.+.+++|.|+. ...+ .+....|- .+++...-.++||++.++.|++++....+. | ....|++.
T Consensus 126 ~dfG~i~g~~~~~~f~i~N~G~~pL~I~-~v~~scgc-t~~~~~~~~i~PGe~~~i~v~~~~~~~~g~~~~~~~~~i~v~ 203 (220)
T 2qsv_A 126 LDMGQLDGETTKAAIEIRNVGAGPLRLH-SVTTRNPA-LTAVPDRTEIKPGGSTLLRIAVDPQVMKAEGWQSIAADISII 203 (220)
T ss_dssp EEEEECTTSCEEEEEEEEECSSSCEEEE-EEEECSTT-EEEEESCSEECTTCEEEEEEEECHHHHHHTTCSEEEEEEEEE
T ss_pred EeeeccCCCeEEEEEEEEECCCCCEEEE-EEEeCCCC-EeeecCCccCCCCCEEEEEEEEecCCCCCcccceeccEEEEE
Confidence 3344333 234455689999997 3322 22333443 233345567999999999999987654233 2 56788888
Q ss_pred eCC
Q 003469 800 GSR 802 (817)
Q Consensus 800 ~~~ 802 (817)
.++
T Consensus 204 ~N~ 206 (220)
T 2qsv_A 204 CND 206 (220)
T ss_dssp ESC
T ss_pred ECC
Confidence 764
No 59
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=63.21 E-value=9 Score=31.95 Aligned_cols=29 Identities=28% Similarity=0.462 Sum_probs=24.4
Q ss_pred EEEEecCeEEEcCCCEEEEEEEEEEecCC
Q 003469 760 AIEVNPPAMTLKPGASRKFTVTLTVRSVT 788 (817)
Q Consensus 760 ~v~~~~~~~tv~~g~~~~~~v~~~~~~~~ 788 (817)
.|++++.+++|..|++.+++.++.|....
T Consensus 8 ~i~l~~~~~~l~vG~t~~L~atv~P~~At 36 (91)
T 2l04_A 8 GMTVTPASTSVVKGQSTTLTVAFQPEGVT 36 (91)
T ss_dssp CEEEECCCEEEETTCEEEEEEEECCSSCC
T ss_pred EEEEeCCceEEEcCCEEEEEEEEeccccC
Confidence 47788999999999999999999886543
No 60
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=62.75 E-value=24 Score=41.24 Aligned_cols=52 Identities=17% Similarity=0.217 Sum_probs=34.7
Q ss_pred EEEEEEEEEcCCC-ce--EEEEEEcCCCc------EEEEecCeEEEcCCCEEEEEEEEEEec
Q 003469 734 QVVTRTVTNVAEE-ET--YSMSARMQPAI------AIEVNPPAMTLKPGASRKFTVTLTVRS 786 (817)
Q Consensus 734 ~~~~~tv~n~~~~-~t--y~~~~~~~~~~------~v~~~~~~~tv~~g~~~~~~v~~~~~~ 786 (817)
.+++.+|||+|+. .. -.+-+..+.+. .+.- =.++.|+|||+++|+++++..+
T Consensus 615 ~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 615 ATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNLTPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEECTTCEEEEEEEEEGGG
T ss_pred EEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-cccceeCCCCeEEEEEEEcHHH
Confidence 4677899999998 33 34444433221 1221 1467899999999999998754
No 61
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=61.02 E-value=25 Score=30.72 Aligned_cols=50 Identities=10% Similarity=0.121 Sum_probs=40.9
Q ss_pred EEEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEec
Q 003469 735 VVTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVRS 786 (817)
Q Consensus 735 ~~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~ 786 (817)
+-+.+|+|.++. ..|++.-+.+.- ..|.|..=.+.||++.+|.|+..+..
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFVDAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEECTTCEEEEEEEECSCC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEECCCCeEEEEEEeCCCC
Confidence 345589999999 999998776654 56678888899999999999998753
No 62
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=58.24 E-value=19 Score=31.98 Aligned_cols=47 Identities=17% Similarity=0.278 Sum_probs=39.9
Q ss_pred EEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEE
Q 003469 736 VTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTV 784 (817)
Q Consensus 736 ~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~ 784 (817)
-..+|+|.++. ..|++.-+.+.- ..+.|..=.|.||++..|.|++.+
T Consensus 29 ~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 29 YHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVLDPKEKVLMAVSCDT 76 (126)
T ss_dssp EEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEECTTCEEEEEEEECC
T ss_pred EEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEECCCCEEEEEEEecC
Confidence 34589999999 999998877764 566788889999999999999977
No 63
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=57.95 E-value=22 Score=41.68 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=35.4
Q ss_pred eEEEEEEEEEcCCC---ceEEEEEEcCCC-c-----EEEEecCeE-EEcCCCEEEEEEEEEEec
Q 003469 733 TQVVTRTVTNVAEE---ETYSMSARMQPA-I-----AIEVNPPAM-TLKPGASRKFTVTLTVRS 786 (817)
Q Consensus 733 ~~~~~~tv~n~~~~---~ty~~~~~~~~~-~-----~v~~~~~~~-tv~~g~~~~~~v~~~~~~ 786 (817)
..+++.+|||+|+. ++-.+-+..+.+ + .+.- =.++ .|+|||+++|+++++..+
T Consensus 616 ~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~~L~pGes~~V~~~l~~~~ 678 (721)
T 2x41_A 616 TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKA-FHKTRLLNPGESEEVVLEIPVRD 678 (721)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEE-EEECCCBCTTCEEEEEEEEEGGG
T ss_pred eEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhc-ccccccCCCCCeEEEEEEECHHH
Confidence 45678899999998 444444444432 1 1111 1467 799999999999998754
No 64
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=55.80 E-value=40 Score=40.17 Aligned_cols=64 Identities=9% Similarity=0.185 Sum_probs=39.8
Q ss_pred cCCCCcEEEe--ee---cceEEEEEEEEEcC-CC-c--eEEEEEEcCCC-c-----EEEEecCeEEEcCCCEEEEEEEEE
Q 003469 719 NFNTPSITVA--HL---VKTQVVTRTVTNVA-EE-E--TYSMSARMQPA-I-----AIEVNPPAMTLKPGASRKFTVTLT 783 (817)
Q Consensus 719 ~ln~ps~~~~--~~---~~~~~~~~tv~n~~-~~-~--ty~~~~~~~~~-~-----~v~~~~~~~tv~~g~~~~~~v~~~ 783 (817)
-|.|-+|... ++ .+..+++.+|||+| +. . +-.+-+..+.+ + .+.- =.++.|+|||+++|+++++
T Consensus 717 GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~L~pGes~~V~~~l~ 795 (845)
T 3abz_A 717 GLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKG-FEKVHLEPGEKKTVNIDLE 795 (845)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEE-EEEEEECTTCEEEEEEEEE
T ss_pred CCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheecc-ceeEEECCCCEEEEEEEeC
Confidence 3455555554 33 24567888999999 76 3 33333433321 1 1211 2467899999999999999
No 65
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=55.57 E-value=24 Score=31.31 Aligned_cols=51 Identities=14% Similarity=0.198 Sum_probs=41.3
Q ss_pred eEEEEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEe
Q 003469 733 TQVVTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVR 785 (817)
Q Consensus 733 ~~~~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~ 785 (817)
..+-..+|+|.++. ..|++.-+.|.- ..+.|..=.|.||++.+|.|++.+.
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVIDPGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEECTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEECCCCeEEEEEEECcC
Confidence 34445689999998 999998776654 5667888899999999999999874
No 66
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=51.10 E-value=40 Score=29.26 Aligned_cols=52 Identities=17% Similarity=0.303 Sum_probs=34.1
Q ss_pred cceEEEEEEEEEcCCC--ceEEEEEEcCCCcEEEEecCeE-EEcCCCEEEEEEEEEEe
Q 003469 731 VKTQVVTRTVTNVAEE--ETYSMSARMQPAIAIEVNPPAM-TLKPGASRKFTVTLTVR 785 (817)
Q Consensus 731 ~~~~~~~~tv~n~~~~--~ty~~~~~~~~~~~v~~~~~~~-tv~~g~~~~~~v~~~~~ 785 (817)
....+++.+|+|.|.. ..|++.+... |-. +....+ .|++|+++++.++.++.
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly~~-g~~--v~t~~v~~LaaG~s~tv~~~w~~~ 72 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLLVD-GIV--VDTQTVTSLESENSTNVDFHWTLD 72 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEEET-TEE--EEEEEESCBCBTCEEEEEEEEECC
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEEEC-CEE--EcceecccccCCCEEEEEEEEeec
Confidence 3456788899999987 6677776543 222 222234 46788888888777654
No 67
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=49.77 E-value=33 Score=29.50 Aligned_cols=48 Identities=17% Similarity=0.236 Sum_probs=40.0
Q ss_pred EEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEe
Q 003469 736 VTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVR 785 (817)
Q Consensus 736 ~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~ 785 (817)
-+.+|+|.++. ..|++.-+.+.- ..|.|..=.+.||++.+|.|+..+.
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFVDPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEECTTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEECCCCeEEEEEEeCCC
Confidence 34589999999 999998776654 5667888889999999999999874
No 68
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=45.90 E-value=37 Score=31.09 Aligned_cols=48 Identities=21% Similarity=0.282 Sum_probs=40.3
Q ss_pred EEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEe
Q 003469 736 VTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVR 785 (817)
Q Consensus 736 ~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~ 785 (817)
-..+|+|.++. ..|++.-+.+.- ..|.|..=.|.||++.+|.|++.+.
T Consensus 39 ~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 39 TLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSCDPGASIDIIVSPHGG 87 (152)
T ss_dssp EEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEECTTCEEEEEEEECSS
T ss_pred EEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEECCCCeEEEEEEecCc
Confidence 34589999998 999998877764 5667888899999999999999774
No 69
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=43.50 E-value=32 Score=31.36 Aligned_cols=48 Identities=15% Similarity=0.216 Sum_probs=40.0
Q ss_pred EEEEEEEcCCC-ceEEEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEe
Q 003469 736 VTRTVTNVAEE-ETYSMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVR 785 (817)
Q Consensus 736 ~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~ 785 (817)
-..+|+|.++. ..|++.-+.+.- ..+.|..=.|.||++.+|.|++.+.
T Consensus 35 ~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 35 TNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGIIDPGSIVTVSVMLQPF 83 (147)
T ss_dssp EEEEEECCSSSCEEEEEEESCTTS--EEEESSEEECCTTCEEEEEEEECCC
T ss_pred EEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEECCCCeEEEEEEECCC
Confidence 34589999998 999998877764 5667888889999999999999873
No 70
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=34.86 E-value=1.7e+02 Score=32.93 Aligned_cols=79 Identities=22% Similarity=0.175 Sum_probs=49.3
Q ss_pred CCCcEEEeeecceEEEEEEEEEcCCC-ceE-EEEEEcCCCcEEEEecCeEEEcCCCEEEEEEEEEEecCCC-ceEEEEEE
Q 003469 721 NTPSITVAHLVKTQVVTRTVTNVAEE-ETY-SMSARMQPAIAIEVNPPAMTLKPGASRKFTVTLTVRSVTG-TYSFGEIC 797 (817)
Q Consensus 721 n~ps~~~~~~~~~~~~~~tv~n~~~~-~ty-~~~~~~~~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~~~~-~~~~G~i~ 797 (817)
..|.+++.. .++.+++.+|+|.... ..- ++++..+.+.+++. ....+++|++++++|+|+++.... ..|.=-+.
T Consensus 363 ~~~~~~~~~-g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~t~~~~vt~~~~~~~g~y~l~~~ 439 (601)
T 1w8o_A 363 TIPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLMPGRQAKGQVTITVPAGTTPGRYRVGAT 439 (601)
T ss_dssp ECCCEEECT-TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBCTTCEEEEEEEEECCTTCCCEEEEEEEE
T ss_pred cCccceecC-CceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccCCCCceEEEEEEecCCCCCCCcEEeeEE
Confidence 346666543 2456777889997553 211 33455577766655 456688999999999999986443 34444455
Q ss_pred EEeCC
Q 003469 798 MKGSR 802 (817)
Q Consensus 798 ~~~~~ 802 (817)
+...+
T Consensus 440 ~~~~~ 444 (601)
T 1w8o_A 440 LRTSA 444 (601)
T ss_dssp EEETT
T ss_pred EEecC
Confidence 55533
No 71
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=32.87 E-value=1.7e+02 Score=24.90 Aligned_cols=51 Identities=14% Similarity=0.268 Sum_probs=32.6
Q ss_pred EEEEEEEEEcCCC--ceEEEEEEcCCCcEE--------EEecCeEE---------EcC-CCEEEEEEEEEE
Q 003469 734 QVVTRTVTNVAEE--ETYSMSARMQPAIAI--------EVNPPAMT---------LKP-GASRKFTVTLTV 784 (817)
Q Consensus 734 ~~~~~tv~n~~~~--~ty~~~~~~~~~~~v--------~~~~~~~t---------v~~-g~~~~~~v~~~~ 784 (817)
-+..++|+|.+.. ..|++++..|.+.+| +-+...++ |+| |++.+|-+..+-
T Consensus 17 f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s~sG~~vt~~n~~wN~~la~~G~s~~fGf~g~~ 87 (107)
T 3ndz_E 17 ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANGGTQSFGFNINY 87 (107)
T ss_dssp EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTTEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEEecCCEEEEEECCcccccCCCCccEEEEEEEeC
Confidence 3455689999866 568888887655433 22333333 456 888777777664
No 72
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=32.65 E-value=25 Score=26.56 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=25.3
Q ss_pred hhHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc
Q 003469 601 AAPHIAGIAALVKQKHPYWSPAAIKSALMTTTT 633 (817)
Q Consensus 601 AaP~VAG~aALl~q~~p~ls~~~ik~~L~~TA~ 633 (817)
..|..--....|++.||+++...|+..|...=.
T Consensus 5 ~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 5 SSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 333444566789999999999999999986543
No 73
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=29.92 E-value=1.2e+02 Score=25.98 Aligned_cols=50 Identities=10% Similarity=0.058 Sum_probs=37.3
Q ss_pred cceEEEEEEEEEcCCC---ceEEEEEEcCCCcEEEEe--c-CeEEEcCCCEEEEEE
Q 003469 731 VKTQVVTRTVTNVAEE---ETYSMSARMQPAIAIEVN--P-PAMTLKPGASRKFTV 780 (817)
Q Consensus 731 ~~~~~~~~tv~n~~~~---~ty~~~~~~~~~~~v~~~--~-~~~tv~~g~~~~~~v 780 (817)
.+-.....+|+|.... ..|.+.+....|+.+.-. + .+++|+++++.+|.-
T Consensus 37 ~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l~~ 92 (112)
T 3o0l_A 37 AGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQVTA 92 (112)
T ss_dssp GGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCTTCCCEEEEECTTCEEEEEE
T ss_pred CCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCCCCCcEEEEECCCCeEEEEE
Confidence 3445566689999887 568899888888877632 4 579999999877663
No 74
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=29.81 E-value=2.2e+02 Score=30.08 Aligned_cols=69 Identities=16% Similarity=0.252 Sum_probs=42.3
Q ss_pred eEEEEEEEEEcCCC-c---eEE---EEEEcC----------------CCcEEEEecCeEEEcCCCEEEEEEEEEEec---
Q 003469 733 TQVVTRTVTNVAEE-E---TYS---MSARMQ----------------PAIAIEVNPPAMTLKPGASRKFTVTLTVRS--- 786 (817)
Q Consensus 733 ~~~~~~tv~n~~~~-~---ty~---~~~~~~----------------~~~~v~~~~~~~tv~~g~~~~~~v~~~~~~--- 786 (817)
+-+++.+|||.|++ . .|+ +.+..+ .| ++ +++ .++|||+++++|+++-..
T Consensus 299 ~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI~PGETrt~~V~a~da~Wev 373 (419)
T 3rfr_A 299 ELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VIAPGESKEIVVKIQDARWDI 373 (419)
T ss_dssp EEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CBCTTCEEEEEEEEECHHHHH
T ss_pred EEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--CcCCCcceEEEEEeehHHHHH
Confidence 45677899999998 3 222 112111 12 44 555 899999999999887543
Q ss_pred --C------CCceEEEEEEEEeCCCcEE
Q 003469 787 --V------TGTYSFGEICMKGSRGHKV 806 (817)
Q Consensus 787 --~------~~~~~~G~i~~~~~~~~~l 806 (817)
. .+.-+-|-|.|.+..++.-
T Consensus 374 eRL~~l~~D~dSrfgGLLfF~d~~G~r~ 401 (419)
T 3rfr_A 374 ERLSDLAYDTDSQVGGLLFFFTPDGKRF 401 (419)
T ss_dssp TTGGGGGGSSSCEEEEEEEEECSSSCEE
T ss_pred HHHhhhhcCchhheeEEEEEEcCCCCEE
Confidence 0 1223557777776556543
No 75
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=25.32 E-value=80 Score=26.43 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=29.2
Q ss_pred ceEEEEEEEEEcCCC-ceEEEEE----Ec----------CCCcEEEE-ecCeEEEcCCCEEEEEEE
Q 003469 732 KTQVVTRTVTNVAEE-ETYSMSA----RM----------QPAIAIEV-NPPAMTLKPGASRKFTVT 781 (817)
Q Consensus 732 ~~~~~~~tv~n~~~~-~ty~~~~----~~----------~~~~~v~~-~~~~~tv~~g~~~~~~v~ 781 (817)
+..+++.+|+|+|+. ..- -+| +. .-|-.+.+ +.+.+.++||++++|++.
T Consensus 18 gr~~~~l~V~NtGDRPIQV-GSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPIQV-GSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp TCCEEEEEEEECSSSCEEE-ETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CCCEEEEEEEeCCCcceEE-ccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 444567799999997 220 011 11 12333333 135788999999998864
No 76
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=24.95 E-value=52 Score=30.23 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=26.7
Q ss_pred ecCccchhHHHHHHHHHHHHhCCCCCHHHHHHH
Q 003469 595 ISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSA 627 (817)
Q Consensus 595 ~sGTSmAaP~VAG~aALl~q~~p~ls~~~ik~~ 627 (817)
+.|-| =|++|-|.+|||++.+-..+|+||.+.
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 34555 479999999999999999999998654
No 77
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=24.23 E-value=1.4e+02 Score=29.71 Aligned_cols=65 Identities=14% Similarity=0.148 Sum_probs=40.5
Q ss_pred cCCCCcEEEeeecceEEEEEEEEEcCCC-ceEEEEEEcCCCcEEEEe-----cCeEEEcCCCEEEEEEEEEEe
Q 003469 719 NFNTPSITVAHLVKTQVVTRTVTNVAEE-ETYSMSARMQPAIAIEVN-----PPAMTLKPGASRKFTVTLTVR 785 (817)
Q Consensus 719 ~ln~ps~~~~~~~~~~~~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~-----~~~~tv~~g~~~~~~v~~~~~ 785 (817)
++++|..... ...-.+..+|.|..+. ...++......++..... ..+++|++++++++.+.+.+.
T Consensus 85 ~~~LP~sv~r--GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~ 155 (252)
T 3hrz_B 85 DLQMPYSVVK--NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPL 155 (252)
T ss_dssp EECCCSCEET--TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEECTTEEEEEEEEEEEC
T ss_pred EcCCCcEEee--CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEECCCCeEEEEEEEEec
Confidence 3556654432 2344566788998887 666666554443322111 235889999999999988763
No 78
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=24.03 E-value=3.3e+02 Score=23.06 Aligned_cols=50 Identities=12% Similarity=0.259 Sum_probs=31.1
Q ss_pred EEEEEEEEEcCCC--ceEEEEEEcCCCcEEE--------EecCeE---------EEcCCCEEEEEEEEE
Q 003469 734 QVVTRTVTNVAEE--ETYSMSARMQPAIAIE--------VNPPAM---------TLKPGASRKFTVTLT 783 (817)
Q Consensus 734 ~~~~~tv~n~~~~--~ty~~~~~~~~~~~v~--------~~~~~~---------tv~~g~~~~~~v~~~ 783 (817)
-+..++|+|.+.. ..|++++..+.+.+|+ -+...+ +|+||++.+|-+..+
T Consensus 21 f~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~s~sG~~vt~~n~~wN~~la~G~s~~fGf~~~ 89 (110)
T 1exg_A 21 FTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAGGTAQFGFNGS 89 (110)
T ss_dssp EEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEEEEETTEEEEEECSGGGEECSSEEEEEEEEEE
T ss_pred EEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEEEccCCEEEEecccccceeCCCcEEEEEEEEe
Confidence 3455689998876 6788988876554332 222233 346777776666654
No 79
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=23.86 E-value=6.4e+02 Score=26.31 Aligned_cols=41 Identities=20% Similarity=0.284 Sum_probs=26.5
Q ss_pred EEcCCCEEEEEEEEEEec-------C----CCceEEEEEEEEeCCCcEEEEe
Q 003469 769 TLKPGASRKFTVTLTVRS-------V----TGTYSFGEICMKGSRGHKVNIP 809 (817)
Q Consensus 769 tv~~g~~~~~~v~~~~~~-------~----~~~~~~G~i~~~~~~~~~l~iP 809 (817)
.++|||+++++|+++-.. . .+.-+-|-+.|.+..++.--+.
T Consensus 321 pI~PGETr~~~v~a~da~WeveRL~~l~~D~dSrfgGLLfF~d~~G~r~~~~ 372 (382)
T 1yew_A 321 PLAPGETRTVDVTASDAAWEVYRLSDIIYDPDSRFAGLLFFFDATGNRQVVQ 372 (382)
T ss_dssp CBCTTCEEEEEEEEECHHHHHTCGGGGGGSSCCEEEEEEEEEETTSCEEEEE
T ss_pred CcCCCceeEEEEEeehHHHHHHHhhhhhcCcccceeEEEEEEcCCCCEEEEe
Confidence 467999999999887543 0 1223557777777656554333
No 80
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=23.60 E-value=3.2e+02 Score=32.74 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=44.4
Q ss_pred cCCCCcEEEeeecceEEEEEEEEEcCC-C-ceEEEEEEcCCCcEEEE-----ecCeEEEcCCCEEEEEEEEEEe
Q 003469 719 NFNTPSITVAHLVKTQVVTRTVTNVAE-E-ETYSMSARMQPAIAIEV-----NPPAMTLKPGASRKFTVTLTVR 785 (817)
Q Consensus 719 ~ln~ps~~~~~~~~~~~~~~tv~n~~~-~-~ty~~~~~~~~~~~v~~-----~~~~~tv~~g~~~~~~v~~~~~ 785 (817)
++++|-+-.. .....+..+|.|..+ . .+.++......++.+.- ...+|+|++|+++++.+.+.+.
T Consensus 84 ~~~LP~~v~~--GD~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~i~~~ 155 (915)
T 2hr0_B 84 DLRLPYSVVR--NEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTIPPKSSLSVPYVIVPL 155 (915)
T ss_dssp EEECCSEEET--TCCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSSSCEEEEEEECTTEEEEEEEEEEEC
T ss_pred EccCCCEEec--CcEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCCCcceeEEEECCCCeEEEEEEEEEC
Confidence 3455543321 234567778999999 8 88888876655543321 1357999999999999999863
No 81
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=21.15 E-value=50 Score=29.83 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=27.7
Q ss_pred EeecCccchhHHHHHHHHHHHHhCCCCCHHHHHH
Q 003469 593 ALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKS 626 (817)
Q Consensus 593 ~~~sGTSmAaP~VAG~aALl~q~~p~ls~~~ik~ 626 (817)
-.+.|-| =|+.|-|.+|||.+.+-..+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4455666 47999999999999999999999865
No 82
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=21.11 E-value=1.1e+02 Score=26.74 Aligned_cols=21 Identities=24% Similarity=0.438 Sum_probs=13.0
Q ss_pred EEEEecCeEEEcCCCEEEEEE
Q 003469 760 AIEVNPPAMTLKPGASRKFTV 780 (817)
Q Consensus 760 ~v~~~~~~~tv~~g~~~~~~v 780 (817)
...++|..|++++|++.+|.+
T Consensus 15 ~~~F~P~~i~V~~GdtV~f~~ 35 (123)
T 3erx_A 15 AMVFEPAFVRAEPGDVINFVP 35 (123)
T ss_dssp EEEEESSEEEECTTEEEEEEE
T ss_pred cEeEeCCEEEECCCCEEEEEE
Confidence 456666677777776655544
No 83
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=20.59 E-value=6.7e+02 Score=31.71 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=46.0
Q ss_pred cCCCCcEEEeeecceEEEEEEEEEcCCC-ceEEEEEEcCCCcEEEEe---cCeEEEcCCCEEEEEEEEEEe
Q 003469 719 NFNTPSITVAHLVKTQVVTRTVTNVAEE-ETYSMSARMQPAIAIEVN---PPAMTLKPGASRKFTVTLTVR 785 (817)
Q Consensus 719 ~ln~ps~~~~~~~~~~~~~~tv~n~~~~-~ty~~~~~~~~~~~v~~~---~~~~tv~~g~~~~~~v~~~~~ 785 (817)
++++|-+-.. .+...+..+|.|..+. .+.++......++.+.-. ..+++|++|+++++.+.+.+.
T Consensus 772 ~~~LP~sv~r--GE~~~l~~~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~ 840 (1451)
T 4acq_A 772 ELTMPYSVIR--GEAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKEQAPHCICANGRQTVSWAVTPK 840 (1451)
T ss_dssp EEECCSEEES--SSCEEEEEEEEECSSSCEEEEEEECCCTTEEEEESCSCCCCEEECTTEEEEEEEEEEEC
T ss_pred EccCCceEec--CCEEEEEEEEEeccCccEEEEEEEEcCCCeEeecCCCCceEEEECCCCeEEEEEEEEEC
Confidence 3455544332 2345677789999888 888888776666555432 468999999999999999864
No 84
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=20.23 E-value=71 Score=26.48 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=13.5
Q ss_pred EEecCeEEEcCCCEEEEEE
Q 003469 762 EVNPPAMTLKPGASRKFTV 780 (817)
Q Consensus 762 ~~~~~~~tv~~g~~~~~~v 780 (817)
.++|..|+|++|++.++.+
T Consensus 24 ~F~P~~i~v~~G~tV~~~~ 42 (100)
T 4hci_A 24 YFNPNVITIPINESTTLLL 42 (100)
T ss_dssp EEESSEEEECTTSCEEEEE
T ss_pred EEeCCEEEECCCCEEEEEE
Confidence 4567778888887766654
Done!