Query 003470
Match_columns 817
No_of_seqs 311 out of 3137
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 17:45:26 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003470.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1520-1524//hhsearch_pdb/003470hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 1.0 1 1 886.6 52.6 622 130-815 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 1.0 1 1 836.6 49.4 611 130-815 1-620 (621)
3 1xf1_A C5A peptidase, SCP; hyd 1.0 1 1 697.7 42.2 543 135-814 2-605 (926)
4 3afg_A Subtilisin-like serine 1.0 1 1 502.2 40.0 339 85-677 59-419 (539)
5 2p4e_P Proprotein convertase s 1.0 1 1 473.5 9.6 343 85-675 108-465 (692)
6 2z2z_A TK-subtilisin precursor 1.0 1 1 466.8 19.3 319 85-676 23-392 (395)
7 3t41_A Epidermin leader peptid 1.0 1 1 462.2 28.4 337 85-677 65-466 (471)
8 1r6v_A Subtilisin-like serine 1.0 1 1 456.9 24.8 339 86-682 53-445 (671)
9 1y9z_A Alkaline serine proteas 1.0 1 1 437.1 28.0 390 137-696 11-436 (441)
10 4h6x_A Thiazoline oxidase/subt 1.0 1 1 426.5 4.5 308 138-676 19-338 (357)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=1.00 E-value=1 Score=886.63 Aligned_cols=622 Identities=35% Similarity=0.572 Sum_probs=530.8
Q ss_pred CCCCCCCCCCCC--CCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCE
Q ss_conf 678986568998--88989999888899619999421230799998999999999999-877522338998876678723
Q 003470 130 TTHTPEFLGLPT--GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVP-KYRGKCEVDPDTKRSFCNGKI 206 (817)
Q Consensus 130 ~~~s~~~~g~~~--~~~~~~~~~~~~G~GV~VaVIDtGiD~~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki 206 (817)
++++|+|+|+++ .+|.. +++|+||+|||||||||++||+|.+. +++++| +|+|.|+.+.+|....||+|+
T Consensus 1 Tt~s~~flgl~~~~~~w~~----~~~G~gViVaViDTGId~~Hp~f~d~---g~~p~p~~wkg~c~~g~~f~~~~cN~ki 73 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPA----SGLGQDVIVAVLDSGIWPESASFQDD---GMPEIPKRWKGICKPGTQFNASMCNRKL 73 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHH----HGGGTTCEEEEEESCBCTTSGGGCCT---TCCCCCTTCCCCBCCBTTBCTTSCCSSE
T ss_pred CCCCHHHCCCCCCHHHHHC----CCCCCCCEEEEECCCCCCCCHHHCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 9889677699972546860----58999989999826989999414068---9887753235633257666643345625
Q ss_pred EEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCH
Q ss_conf 43422267787530489988899999899987620110102789664335667652132157883999992315898878
Q 003470 207 IGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFV 286 (817)
Q Consensus 207 ~g~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~ 286 (817)
++.++|..+..... .+...++.++.|..||||||||||||+...+.+..|+..|.+.||||+|+|++||+++.. ++..
T Consensus 74 ig~~~f~~~~~~~~-~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~-g~~~ 151 (649)
T 3i6s_A 74 IGANYFNKGILAND-PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE-GTFT 151 (649)
T ss_dssp EEEEECCHHHHHHC-TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETT-EECH
T ss_pred EEEEECCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCC-CCCH
T ss_conf 55575047642234-566657799888998589999998687776866334466754678788889998334788-9889
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 89999999998849959995679999999986677796999999999869339983679989998766789837999311
Q 003470 287 ADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAA 366 (817)
Q Consensus 287 ~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~ 366 (817)
+++++||+||+++|+||||||||.... ....+++..+++++.++|++||+||||+|+...++++.+||+|+|||+
T Consensus 152 ~~i~~Ai~~A~~~gvdVIn~SlG~~~~-----~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAs 226 (649)
T 3i6s_A 152 SDLIAAMDQAVADGVDMISISYGYRFI-----PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASG 226 (649)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCCSC-----CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCC-----CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 999999999997699799958766776-----420269999999998499489995888899878557889946899665
Q ss_pred ECCCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCEEEEECCCC
Q ss_conf 028502237992898099843147898898147889826443344334468777899633444654--661999900244
Q 003470 367 IDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLV--EGNILLCGYSFN 444 (817)
Q Consensus 367 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~--~gki~l~~~~~~ 444 (817)
+.++.|...+.+++++.+.+.++++.......+|+++.. ....|.. ..++...+ +|||++|.+
T Consensus 227 t~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~-----------~~~~C~~-~~l~~~~vdl~GkIvlc~~--- 291 (649)
T 3i6s_A 227 HTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK-----------TLSDCSS-EELLSQVENPENTIVICDD--- 291 (649)
T ss_dssp ECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT-----------TTTTCCC-HHHHTTSSSGGGCEEEECC---
T ss_pred ECCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEECC-----------CCCCCCC-CCCCCCCCCCCCCEEEEEC---
T ss_conf 115530368992798578656425676667603568646-----------6443565-5456542134884899927---
Q ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
Q ss_conf 33576207778999986396099995538999973478777878299917100799999983067767765067420136
Q 003470 445 FVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTG 524 (817)
Q Consensus 445 ~~~g~~~~~~~~~~~~~~Ga~~~i~~n~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 524 (817)
+.+.+.++..+++.+|+.++|++|+. .........+|.+.+.. ++++.++.|+++... +... +.+.
T Consensus 292 ---g~~~~~~k~~~~~~~Ga~g~i~~n~~----~~~~~~~~~~P~~~v~~-~~g~~i~~yi~s~~~--~~a~-i~~~--- 357 (649)
T 3i6s_A 292 ---NGDFSDQMRIITRARLKAAIFISEDP----GVFRSATFPNPGVVVNK-KEGKQVINYVKNSVT--PTAT-ITFQ--- 357 (649)
T ss_dssp ---CSCHHHHHHHHHHHTCSEEEEECCCG----GGGGCCCCCSCEEEECH-HHHHHHHHHHHTCSS--CEEE-EEEE---
T ss_pred ---CCCCHHHHHHHHHHCCCEEEEEECCC----CCCCCCCCCCCEEEECH-HHHHHHHHHHHCCCC--CEEE-EEEC---
T ss_conf ---98618888888975584378972475----43356567687799748-897999999865898--4599-9625---
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC----CCCCEEEECCCCC
Q ss_conf 746887543367899223456789888898747756568742269971897207999998775----5776076327653
Q 003470 525 TIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANF----VGEGFALISGTSM 600 (817)
Q Consensus 525 ~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~----~~~~y~~~sGTSm 600 (817)
.+......++.++.||||||+.+ .++++||||+|||++|+++++......... ....|..+|||||
T Consensus 358 -----~t~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSM 427 (649)
T 3i6s_A 358 -----ETYLDTKPAPVVAASSARGPSRS-----YLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSM 427 (649)
T ss_dssp -----EEECCCSSCCEECTTSCCSSCTT-----CTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHH
T ss_pred -----CEEECCCCCCCCCCCCCCCCCCC-----CCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCCC
T ss_conf -----32504677885223689899877-----88865885995888868535798776655665446664032466420
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 26799999999997399999999999986356445568984211231034331026689983353212823326987143
Q 003470 601 AAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGLIF 680 (817)
Q Consensus 601 AaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaG~id~~~Al~~~l~~ 680 (817)
|||||||++|||||+||+|+|++||++||+||.++++.+.|+.+.. ...+++++.||+|+||+.+|++|+|||
T Consensus 428 AaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~-------~~~~a~~~~~GaG~vn~~~A~~pGLvy 500 (649)
T 3i6s_A 428 AAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSD-------NNKAATPLDMGAGHVDPNRALDPGLVY 500 (649)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETT-------TSSBCCHHHHTTCBCCHHHHTCCSEEC
T ss_pred CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCEEEECHHHHCCCCCCC
T ss_conf 0687889999998757899999999999630635467898421356-------677577677980554799965956324
Q ss_pred ECCCHHHHHCCCCCCCCCCEEEECCCCCC----CCCCCCCCCCCCCCCEEEEE-ECCE-----EEEEEEEEECCCC-CEE
Q ss_conf 06720011002369987720010123766----67789999867879179942-0100-----9999999985889-259
Q 003470 681 DAGYEDYLGFLCTTPGIDIHEIRNYTNQP----CNYSMGHPYNFNTPSITVAH-LVKT-----QVVTRTVTNVAEE-ETY 749 (817)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~n~ps~~~~~-~~~~-----~~~~~tv~n~~~~-~ty 749 (817)
|+..+||+.|||++++ +..+|..+++.. |.. .+.+||||||++.. ..+. ++|+|||||++.. .+|
T Consensus 501 d~~~~dy~~flc~~~y-~~~~i~~~~~~~~~~~C~~---~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y 576 (649)
T 3i6s_A 501 DATPQDYVNLLCSLNF-TEEQFKTIARSSASHNCSN---PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATY 576 (649)
T ss_dssp CCCHHHHHHHHHTTCC-CHHHHHHHHTTTSCC-CCC---CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEE
T ss_pred CCCCHHHHHHHHCCCC-CCCCCEEEECCCCCCCCCC---CHHHCCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCEE
T ss_conf 4773067886414799-8222225635877677888---64234788478023568877543089998899717998589
Q ss_pred EEEEECCCCCEEEEECCEEEEC-CCCEEEEEEEEEEECC-CCCEEEEEEEEEEC-CCCEEEEEEEEEEE
Q ss_conf 9999838973899955929985-9979999999998238-99619999999928-97279975999930
Q 003470 750 SMSARMQPAIAIEVNPPAMTLK-PGASRKFTVTLTVRSV-TGTYSFGEICMKGS-RGHKVNIPVIAQGN 815 (817)
Q Consensus 750 ~~~~~~~~~~~v~~~p~~~~~~-~g~~~~~~vt~~~~~~-~~~~~~G~i~~~~~-~~~~l~~P~~~~~~ 815 (817)
++.+..|.|+.|+++|.+|+|. .||+++|+|||+.... .+.+.+|+|+|+++ +.|.||+|++|+..
T Consensus 577 ~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 577 KAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEECCEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEEEEEC
T ss_conf 999906999789998897898118988999999996435788658999999838997699875999971
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=1.00 E-value=1 Score=836.63 Aligned_cols=611 Identities=35% Similarity=0.577 Sum_probs=502.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 67898656899888989999888899619999421230799998999999999999-87752233899887667872343
Q 003470 130 TTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVP-KYRGKCEVDPDTKRSFCNGKIIG 208 (817)
Q Consensus 130 ~~~s~~~~g~~~~~~~~~~~~~~~G~GV~VaVIDtGiD~~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki~g 208 (817)
++++|+|+|+++..|.. ..+|+||+|||||||||++||+|.+. ++.+++ +|+|.|+.+.++ .||+|+++
T Consensus 1 tt~s~~flGl~~~~~~~----~~~G~gViVgViDTGId~~Hp~f~d~---g~~~~~~~w~g~~~~~~~~---~~n~k~ig 70 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRR----SQVESNIVVGVLDTGIWPESPSFDDE---GFSPPPPKWKGTCETSNNF---RCNRKIIG 70 (621)
T ss_dssp CCSHHHHTTCCTTCCCC----HHHHTTCEEEEEESCBCTTSGGGCCT---TCCCCCTTCCCCBCCSSSC---CCCSSEEE
T ss_pred CCCCHHHCCCCCCCCCC----CCCCCCCEEEEEECCCCCCCHHHCCC---CCCCCCCCCCCCCCCCCCC---CCCCCEEE
T ss_conf 98885676997221344----78989979999935889999656289---9887653235632258876---66764433
Q ss_pred EEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 42226778753048998889999989998762011010278966433566765213215788399999231589887889
Q 003470 209 AQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVAD 288 (817)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~ 288 (817)
+++|..+. .....+..+|+|++||||||||||||+...+....|...+.+.||||+|+|++||+|++. ++..++
T Consensus 71 ~~~~~~~~-----~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~-g~~~~d 144 (621)
T 3vta_A 71 ARSYHIGR-----PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCSDTD 144 (621)
T ss_dssp EEECCCSS-----SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETT-EECHHH
T ss_pred EEECCCCC-----CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCC-CCCHHH
T ss_conf 56334688-----667778789887892778999998576777766345466667888899979999911489-997799
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEC
Q ss_conf 99999999884995999567999999998667779699999999986933998367998999876678983799931102
Q 003470 289 VVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAID 368 (817)
Q Consensus 289 i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~ 368 (817)
+++||++|+++|+||||||||+..+.+ ...++++.++++++++|+++|+||||+|+...++++.+||+++|++++.
T Consensus 145 i~~a~~~a~~~g~dVin~SlG~~~~~~----~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~ 220 (621)
T 3vta_A 145 ILAAYDDAIADGVDIISLSVGGANPRH----YFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTM 220 (621)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCCGGG----GGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCCCC----CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 999999999729989982677887777----6775999999999878988999478888887404778887416887603
Q ss_pred CCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 85022379928980998431478988981478898264433443344687778996334446546619999002443357
Q 003470 369 DRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTG 448 (817)
Q Consensus 369 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~l~~~~~~~~~g 448 (817)
++.+...+.++++..+.+..+... ....++++...+...... .......|. ...++...++|||++|.+.
T Consensus 221 d~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~v~gkivl~~~~------ 290 (621)
T 3vta_A 221 DRKFVTQVQIGNGQSFQGVSINTF--DNQYYPLVSGRDIPNTGF-DKSTSRFCT-DKSVNPNLLKGKIVVCEAS------ 290 (621)
T ss_dssp SEEEEEEEEETTSCEEEEBCCCCS--CCEEECEEETTTSCCTTC-CHHHHTTTC-TTCSCGGGTTTSEEECSSC------
T ss_pred CCCCEEEEEECCCCEEEEEECCCC--CCCCCCCCCCCCCCCCCC-CCCCCCCCC-CCCCCCCCCCCEEEEEECC------
T ss_conf 654022477325740542350357--886432102553454555-654323246-6665531323309998147------
Q ss_pred CCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECC
Q ss_conf 62077789999863960999955389999734787778782999171007999999830677677650674201367468
Q 003470 449 TASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGD 528 (817)
Q Consensus 449 ~~~~~~~~~~~~~~Ga~~~i~~n~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (817)
+..+..+.+..|+.+++++++.... .....+|...+.. +++..++.|+...... ... .+..
T Consensus 291 ---~~~~~~~~~~~Ga~gvi~~~~~~~~-----~~~~~lP~~~v~~-~~g~~i~~~~~~~~~~--~a~--~~~~------ 351 (621)
T 3vta_A 291 ---FGPHEFFKSLDGAAGVLMTSNTRDY-----ADSYPLPSSVLDP-NDLLATLRYIYSIRSP--GAT--IFKS------ 351 (621)
T ss_dssp ---CCHHHHHHHHTTCSEEEEECSCCSS-----CCCCSSSEEEECH-HHHHHHHHHHHHHSSC--CEE--ECCC------
T ss_pred ---CCHHHHHHHHCCEEEEEEEECCCCC-----CCCCCCCEEEECH-HHHHHHHHHHHCCCCC--CEE--EECC------
T ss_conf ---7716776651560499997347776-----6664542599779-9999999998626775--068--7222------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 87543367899223456789888898747756568742269971897207999998775577607632765326799999
Q 003470 529 GLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGI 608 (817)
Q Consensus 529 ~~~~~~~~~~~~~a~fSS~GP~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~ 608 (817)
.......++.++.||||||+.. ..+++||||+|||++|+|+++..........+..|..|||||||||||||+
T Consensus 352 --~~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGv 424 (621)
T 3vta_A 352 --TTILNASAPVVVSFSSRGPNRA-----TKDVIKPDISGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGI 424 (621)
T ss_dssp --EEEECTTCCCBCTTSCCCSCTT-----CTTSCSCCEEEECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHH
T ss_pred --EEECCCCCCCEEEECCCCCCCC-----CCCEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHH
T ss_conf --5750578872444057798887-----787206630368865675447665666767887505743766421546668
Q ss_pred HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHH
Q ss_conf 99999739999999999998635644556898421123103433102668998335321282332698714306720011
Q 003470 609 AALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYL 688 (817)
Q Consensus 609 aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaG~id~~~Al~~~l~~~~~~~~~~ 688 (817)
+|||||+||+|+|++||++||+||++++..+. ++.+++||+|+||+.+|++|+||||+...||+
T Consensus 425 aALl~q~~P~~spa~IksaLmtTA~~~~~~~~----------------~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~ 488 (621)
T 3vta_A 425 ATYVKTYNPTWSPAAIKSALMTTASPMNARFN----------------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYV 488 (621)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTC----------------TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC
T ss_pred HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC----------------CCCCHHCCCCCCCHHHHCCCCEEEECCCCHHH
T ss_conf 99999778999999999999854876666678----------------78703127774387782489768414631023
Q ss_pred HCCCCCCCCCCEEEECCCC--CCCCC-CCCCCCCCCCCCEEEE---EECCEEEEEEEEEECCCC-CEEEEEEECCCCCEE
Q ss_conf 0023699877200101237--66677-8999986787917994---201009999999985889-259999983897389
Q 003470 689 GFLCTTPGIDIHEIRNYTN--QPCNY-SMGHPYNFNTPSITVA---HLVKTQVVTRTVTNVAEE-ETYSMSARMQPAIAI 761 (817)
Q Consensus 689 ~~~~~~~~~~~~~i~~~~~--~~~~~-~~~~~~~~n~ps~~~~---~~~~~~~~~~tv~n~~~~-~ty~~~~~~~~~~~v 761 (817)
.|+|.+++ +..++..+++ ..|.. ....+.+||+|||++. +...+++|+|||||++.. .||++++++|.|++|
T Consensus 489 ~~lc~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v 567 (621)
T 3vta_A 489 KFLCGQGY-NTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTI 567 (621)
T ss_dssp ------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEE
T ss_pred HHHCCCCC-CCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEE
T ss_conf 31024578-70220344036432677785752104666179881699844799999998149997389999988999679
Q ss_pred EEECCEEEEC-CCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf 9955929985-99799999999982389961999999992897279975999930
Q 003470 762 EVNPPAMTLK-PGASRKFTVTLTVRSVTGTYSFGEICMKGSRGHKVNIPVIAQGN 815 (817)
Q Consensus 762 ~~~p~~~~~~-~g~~~~~~vt~~~~~~~~~~~~G~i~~~~~~~~~l~~P~~~~~~ 815 (817)
+++|.+|+|+ .||+++|+|||+.. ..+.+++|+|+|+ ++.|.||+|++|++.
T Consensus 568 ~V~P~~l~f~~~~~~~~~~vt~~~~-~~~~~~~g~l~w~-d~~h~Vr~Pi~v~~~ 620 (621)
T 3vta_A 568 SVNPNVLSFNGLGDRKSFTLTVRGS-IKGFVVSASLVWS-DGVHYVRSPITITSL 620 (621)
T ss_dssp EEESSEEEECSTTCEEEEEEEEEEC-CCSSEEEEEEEEE-CSSCCCEEEEEEECC
T ss_pred EEECCEEEECCCCCEEEEEEEEEEC-CCCCEEEEEEEEE-CCCEEEEECEEEEEE
T ss_conf 9952989975799689999999945-7785689999998-599999928899876
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=1.00 E-value=1 Score=697.74 Aligned_cols=543 Identities=20% Similarity=0.267 Sum_probs=404.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC----------CCCCCCCCCC
Q ss_conf 656899888989999888899619999421230799998999999999999877522338----------9988766787
Q 003470 135 EFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVD----------PDTKRSFCNG 204 (817)
Q Consensus 135 ~~~g~~~~~~~~~~~~~~~G~GV~VaVIDtGiD~~Hp~f~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~n~ 204 (817)
++++++ .+|.. +++|+||+|||||||||++||+|.+.. .|++.|... ......+||+
T Consensus 2 d~i~~~-~~w~~----~~~G~GV~VaVIDTGId~~Hp~f~~~~--------~~~~~~~~~~~~~~~~~~~g~~~g~~~n~ 68 (926)
T 1xf1_A 2 DPSQVK-TLQEK----AGKGAGTVVAVIDAGFDKNHEAWRLTD--------KTKARYQSKEDLEKAKKEHGITYGEWVND 68 (926)
T ss_dssp CTTCCH-HHHHH----HCSCTTCEEEEEESCCTTCCCCCSCCS--------CCCSSCCHHHHHHHHHHTTTCCCCBCCSS
T ss_pred CCCCCH-HHHHC----CCCCCCCEEEEEECCCCCCCHHHCCCC--------CCCCCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf 722657-88860----699899699999028899997686998--------87542134333024444567666654476
Q ss_pred CEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCC-
Q ss_conf 2343422267787530489988899999899987620110102789664335667652132157883999992315898-
Q 003470 205 KIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFG- 283 (817)
Q Consensus 205 ki~g~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~- 283 (817)
|++++++|..+ ...+ |+.||||||||||||+...+.+. .+.+.||||+|+|++||+|++.+.
T Consensus 69 Kii~~~~~~~~------------~~~~-D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~ 131 (926)
T 1xf1_A 69 KVAYYHDYSKD------------GKTA-VDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLA 131 (926)
T ss_dssp SCCEEEESCCC------------SCCC-CSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHH
T ss_pred CCCEEECCCCC------------CCCC-CCCCCHHHHHHHHHCCCCCCCCC----CCCEEEECCCCEEEEEEEECCCCCC
T ss_conf 03203546668------------8998-98985789989986788667666----7746897888889999921389988
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC-------------
Q ss_conf 8788999999999884995999567999999998667779699999999986933998367998999-------------
Q 003470 284 GFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP------------- 350 (817)
Q Consensus 284 ~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~------------- 350 (817)
++.+++++||+||+++|+||||||||...++. ..+.+++..++.+++++|++||+||||+|...
T Consensus 132 ~~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~~---~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~ 208 (926)
T 1xf1_A 132 DYARNYAQAIRDAINLGAKVINMSFGNAALAY---ANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDY 208 (926)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCSSCCCTT---CCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC---CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 72899999999999819919997987898876---555608999999997489689992898887677555543457874
Q ss_pred CC--CCCCCCCEEEEEEEECCCCEEEEEEE-CCCCEEEEEECC--CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87--66789837999311028502237992-898099843147--89889814788982644334433446877789963
Q 003470 351 KT--LVSYSPWITTVAAAIDDRRYKNHLNL-GNGKILAGIGLS--PATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPE 425 (817)
Q Consensus 351 ~~--~~~~~~~vitVgA~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 425 (817)
.+ .++.+||+|+|||++.++.+...+.+ +++....+..+. ........|++++... .|. ..
T Consensus 209 ~tv~~PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------------g~~-~~ 274 (926)
T 1xf1_A 209 GVVGTPAAADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------------GTK-ED 274 (926)
T ss_dssp BCCCSCTTTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------------SCS-TT
T ss_pred CEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEECCC-------------CCC-CC
T ss_conf 2323766688659990565665442116998378764036877237778886578898888-------------878-33
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH
Q ss_conf 34446546619999002443357620777899998639609999553899997347877787829991710079999998
Q 003470 426 VLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYY 505 (817)
Q Consensus 426 ~~~~~~~~gki~l~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~n~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~ 505 (817)
.+ .+++|||++|.| +.|.+.++..+++.+|+.++|++|+..............+|...+.. +++.+|..
T Consensus 275 ~~--~~v~Gkivl~~r------g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~-~~g~~l~~-- 343 (926)
T 1xf1_A 275 DF--KDVKGKIALIER------GDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISR-KDGLLLKD-- 343 (926)
T ss_dssp TT--TTCTTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECH-HHHHHHHH--
T ss_pred CH--HHCCCEEEEEEC------CCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEH-HHHHHHHH--
T ss_conf 06--543880999989------98889999999996797199998367777300157664231799858-99999972--
Q ss_pred HCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 30677677650674201367468875433678992234567898888987477565687422699718972079999987
Q 003470 506 NTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEA 585 (817)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~ 585 (817)
. +.. .++|..+. .......++.++.||||||+.++ ++||||+|||++|+|+++
T Consensus 344 --~----~~~-ti~~~~~~------~~~~~~~~~~~a~FSSrGp~~~~-------~lKPDI~APG~~I~sa~~------- 396 (926)
T 1xf1_A 344 --N----PQK-TITFNATP------KVLPTASGTKLSRFSSWGLTADG-------NIKPDIAAPGQDILSSVA------- 396 (926)
T ss_dssp --C----SSC-EEEECSSC------EEEECSSCSBCCTTSCCCBCTTS-------CBSCCEEEECCCEEESSS-------
T ss_pred --C----CCE-EEEECCCC------EECCCCCCCEECCCCCCCCCCCC-------CCCCEEECCCCCEEEECC-------
T ss_conf --8----945-99855651------12146776655023678989888-------607339889988780116-------
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHH----HCCCCCHHH----HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 75577607632765326799999999997----399999999----9999863564455689842112310343310266
Q 003470 586 NFVGEGFALISGTSMAAPHIAGIAALVKQ----KHPYWSPAA----IKSALMTTTTKLDRASRPLQAQQYSETEAMKLVT 657 (817)
Q Consensus 586 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~~s~~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~ 657 (817)
++.|..+||||||||||||++|||+| .||+|+|++ ||++||+||+++...+ ....
T Consensus 397 ---~~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~--------------~~~~ 459 (926)
T 1xf1_A 397 ---NNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDED--------------EKAY 459 (926)
T ss_dssp ---CSSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG--------------GTEE
T ss_pred ---CCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC--------------CCCC
T ss_conf ---99605637640567899999999999876118887877889999999985387765688--------------8731
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE
Q ss_conf 89983353212823326987143067200110023699877200101237666778999986787917994201009999
Q 003470 658 ATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTPGIDIHEIRNYTNQPCNYSMGHPYNFNTPSITVAHLVKTQVVT 737 (817)
Q Consensus 658 ~~~~~~GaG~id~~~Al~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~n~ps~~~~~~~~~~~~~ 737 (817)
+++++||+|+||+.+|+++.+ |+|..++ +.+++.+..+..+.+++
T Consensus 460 ~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~------------------------~~~~i~l~~~~~~~~~~ 504 (926)
T 1xf1_A 460 FSPRQQGAGAVDAKKASAATM-----------YVTDKDN------------------------TSSKVHLNNVSDKFEVT 504 (926)
T ss_dssp CCHHHHTTCBCCHHHHHHCSE-----------EEEESSS------------------------SCSCEEEEEECSEEEEE
T ss_pred CCHHCCCCCCCCHHHHCCCCE-----------EEECCCC------------------------CCCEEECCCCCCCEEEE
T ss_conf 771032777029989658876-----------9976898------------------------75414526567608999
Q ss_pred EEEEECCCC---CEEEEEEEC--CCCCEEEEE--------CCEEEECCCCEEEEEEEEEEEC---------CCCCEEEEE
Q ss_conf 999985889---259999983--897389995--------5929985997999999999823---------899619999
Q 003470 738 RTVTNVAEE---ETYSMSARM--QPAIAIEVN--------PPAMTLKPGASRKFTVTLTVRS---------VTGTYSFGE 795 (817)
Q Consensus 738 ~tv~n~~~~---~ty~~~~~~--~~~~~v~~~--------p~~~~~~~g~~~~~~vt~~~~~---------~~~~~~~G~ 795 (817)
|||+|+++. .+|++.+.. +.+..+++. +.+|+|+||++++|+|||+++. .++.|++|+
T Consensus 505 ~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~ 584 (926)
T 1xf1_A 505 VNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGF 584 (926)
T ss_dssp EEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEE
T ss_pred EEEEEECCCCEEEEEEEEEEECCCCCCEEEECCCEEEECCCCEEEECCCCEEEEEEEEECCCCCHHHCCCCCCCCEEEEE
T ss_conf 99998279962699999998436788348853553575268759989999899999997476550101346687179999
Q ss_pred EEEEECC--CCEEEEEEEEEE
Q ss_conf 9999289--727997599993
Q 003470 796 ICMKGSR--GHKVNIPVIAQG 814 (817)
Q Consensus 796 i~~~~~~--~~~l~~P~~~~~ 814 (817)
|+|++++ ++.||+||+++.
T Consensus 585 i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 585 VRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEEESSTTSCCCEEEEEEEEE
T ss_pred EEEEECCCCCCEEEEEEEEEE
T ss_conf 999958998778996669996
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=1.00 E-value=1 Score=502.16 Aligned_cols=339 Identities=32% Similarity=0.529 Sum_probs=272.7
Q ss_pred CCEEEEEECCCCCEEEEECCHHHHHHH-----------HCCCCCEEEECCCEECCCCCC-----CCCCCCCCCCCCCCCC
Q ss_conf 711799834430169999199889999-----------729991499826110103678-----9865689988898999
Q 003470 85 TYKKLYSYKHLINGFAVHITPDQAEIL-----------QRAPGVKSVERDWKVRRLTTH-----TPEFLGLPTGVWPTGG 148 (817)
Q Consensus 85 ~~~~~~~~~~~~ng~sv~~~~~~~~~L-----------~~~p~V~~v~~~~~~~~~~~~-----s~~~~g~~~~~~~~~~ 148 (817)
+.++.++|. .||||+++++.+++++| +++|+|++|+++..++..... ....+++ ..+|..
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 134 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMA-TNMWNL-- 134 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBC-SCCBCC--
T ss_pred CCEEEEEEE-EEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC-HHHHHC--
T ss_conf 974899861-1317999938999999874113444201038970499835300134764467732011475-767735--
Q ss_pred CCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCC
Q ss_conf 98888996199994212307999989999999999998775223389988766787234342226778753048998889
Q 003470 149 GFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDF 228 (817)
Q Consensus 149 ~~~~~G~GV~VaVIDtGiD~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 228 (817)
+++|+||+|||||||||++||+|.+ ++++.++|..+ .
T Consensus 135 --g~~G~gv~VaViDtGid~~Hpdl~~-----------------------------~i~~~~d~~~~------------~ 171 (539)
T 3afg_A 135 --GYDGSGITIGIIDTGIDASHPDLQG-----------------------------KVIGWVDFVNG------------K 171 (539)
T ss_dssp --SCCCTTCEEEEEESBCCTTSGGGTT-----------------------------TEEEEEETTTC------------C
T ss_pred --CCCCCCCEEEEEECCCCCCCHHHHC-----------------------------CEEEEEECCCC------------C
T ss_conf --7899982899992587789957848-----------------------------88645878789------------8
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC----CCCEE
Q ss_conf 99998999876201101027896643356676521321578839999923158988788999999999884----99599
Q 003470 229 ASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD----GVDIL 304 (817)
Q Consensus 229 ~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~----g~dVI 304 (817)
..+.|++||||||||||||+.... .|.+.||||+|+|+++|++++.+.+..+++++||+|++++ +++||
T Consensus 172 ~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vi 244 (539)
T 3afg_A 172 TTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVI 244 (539)
T ss_dssp SSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCC-------CCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 998899988889999985867567-------7988998889989999735699986889999999999863253298589
Q ss_pred EECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCC--CCCCCCCCEEEEEEEECCCCEEEEEEECCCC
Q ss_conf 95679999999986677796999999999869339983679989998--7667898379993110285022379928980
Q 003470 305 SLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPK--TLVSYSPWITTVAAAIDDRRYKNHLNLGNGK 382 (817)
Q Consensus 305 N~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~--~~~~~~~~vitVgA~~~~~~~~~~~~~~~g~ 382 (817)
|||||..... ...+.+..+++++.++|+++|+||||+|.... ..++..+++|+|||+..
T Consensus 245 n~SlG~~~~~-----~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~-------------- 305 (539)
T 3afg_A 245 NLSLGSSQSS-----DGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK-------------- 305 (539)
T ss_dssp EECCCCCSCC-----CSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT--------------
T ss_pred EECCCCCCCC-----CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECC--------------
T ss_conf 9588888888-----643399999999986698899978888997776447766785589965417--------------
Q ss_pred EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 99843147898898147889826443344334468777899633444654661999900244335762077789999863
Q 003470 383 ILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSL 462 (817)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~l~~~~~~~~~g~~~~~~~~~~~~~~ 462 (817)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 96099995538999973478777878299917100799999983067767765067420136746887543367899223
Q 003470 463 GAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVA 542 (817)
Q Consensus 463 Ga~~~i~~n~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 542 (817)
.+.++
T Consensus 306 ---------------------------------------------------------------------------~~~~a 310 (539)
T 3afg_A 306 ---------------------------------------------------------------------------YDVIT 310 (539)
T ss_dssp ---------------------------------------------------------------------------TSCBC
T ss_pred ---------------------------------------------------------------------------CCCCC
T ss_conf ---------------------------------------------------------------------------76534
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 45678988889874775656874226997189720799999877557760763276532679999999999739999999
Q 003470 543 LFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPA 622 (817)
Q Consensus 543 ~fSS~GP~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~ 622 (817)
.||||||+.++ ++||||+|||++|+++++...... ......|..++|||||||||||++|||+|++|+|+++
T Consensus 311 ~fSs~Gp~~~~-------~~kpdi~APG~~I~s~~~~~~~~~-~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~ 382 (539)
T 3afg_A 311 DFSSRGPTADN-------RLKPEVVAPGNWIIAARASGTSMG-QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPD 382 (539)
T ss_dssp SSSCCCCCTTC-------BCCCSEEEECSSEEEECCTTCCCS-EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCCCCCCCC-------CCCCCEECCCCCEEEECCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 33477888777-------876667558688882036887778-8876655466764788899999999999877999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999986356445568984211231034331026689983353212823326987
Q 003470 623 AIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDPG 677 (817)
Q Consensus 623 ~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaG~id~~~Al~~~ 677 (817)
+||++|++||+++...+ .+++.||+|+||+.+|++..
T Consensus 383 ~vk~~L~~tA~~~~~~~------------------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 383 KVKTALIETADIVKPDE------------------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHHSBCSSGGG------------------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHHHHCCCCCCCC------------------CCCCCCCCCCCCHHHHHHHC
T ss_conf 99999996293478889------------------98567557811799996100
No 5
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=1.00 E-value=1 Score=473.50 Aligned_cols=343 Identities=21% Similarity=0.225 Sum_probs=248.7
Q ss_pred CCEEEEEECCCCCEEEEECCHHHHHHHHCCCCCEEEECCCEECCCCCCCCCCCCC--C---CCCCCCCCCCCCCCCCEEE
Q ss_conf 7117998344301699991998899997299914998261101036789865689--9---8889899998888996199
Q 003470 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGL--P---TGVWPTGGGFDRAGEDIVI 159 (817)
Q Consensus 85 ~~~~~~~~~~~~ng~sv~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~s~~~~g~--~---~~~~~~~~~~~~~G~GV~V 159 (817)
..++++.|.+.|+||+++++++.+++|+++|+|++|+++..+... ...|.+..+ . ...|.. +++|+||+|
T Consensus 108 ~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-~~pWgL~~i~~~~~~~~~w~~----~~~G~GV~V 182 (692)
T 2p4e_P 108 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-SIPWNLERITPPRYRADEYQP----PDGGSLVEV 182 (692)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC-----------------------------------
T ss_pred CCCEEEEEECCCCEEEEEECHHHHHHHHCCCCCEEEEECCCCCCC-CCCCCHHHCCCCCCCCCCCCC----CCCCCCCEE
T ss_conf 554045750335189999699999998728996499835424567-888525324666555322344----889998589
Q ss_pred EEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99421230799998999999999999877522338998876678723434222677875304899888999998999876
Q 003470 160 GFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGS 239 (817)
Q Consensus 160 aVIDtGiD~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGT 239 (817)
+|||||||++||+|.+... |. ++++..+. +......++.|++||||
T Consensus 183 aVIDTGId~~HpdL~gr~~--------~~--------------------~~~~~~d~------dg~~~~~~~~D~~GHGT 228 (692)
T 2p4e_P 183 YLLDTSIQSDHREIEGRVM--------VT--------------------DFENVPEE------DGTRFHRQASKCDSHGT 228 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEECCCCCCCCHHHCCCEE--------EC--------------------CCCCCCCC------CCCCCCCCCCCCCCCHH
T ss_conf 9976888888943437557--------42--------------------66546577------78746678878787487
Q ss_pred CCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC------CCCEEEECCCCCCC
Q ss_conf 201101027896643356676521321578839999923158988788999999999884------99599956799999
Q 003470 240 HTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD------GVDILSLSVGPNSP 313 (817)
Q Consensus 240 hVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~------g~dVIN~SlG~~~~ 313 (817)
||||||+|+. .||||+|+|+++|++++.+.++.+++++||+|++++ +++|||||||..
T Consensus 229 HVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~-- 292 (692)
T 2p4e_P 229 HLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG-- 292 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHCCC--------------CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC--
T ss_conf 7546762277--------------764889989999844689987889999999999863220467864897147888--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC-CCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 999866777969999999998693399836799899987-6678983799931102850223799289809984314789
Q 003470 314 PATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKT-LVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPA 392 (817)
Q Consensus 314 ~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~-~~~~~~~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~ 392 (817)
+...+..+++++.++|+++|+||||+|..... .|+..+++|+|||++.+..
T Consensus 293 -------~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~--------------------- 344 (692)
T 2p4e_P 293 -------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQ--------------------- 344 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCC---------------------
T ss_conf -------7689999999999789979997788777777637656898899998759998---------------------
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 88981478898264433443344687778996334446546619999002443357620777899998639609999553
Q 003470 393 THGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVE 472 (817)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~l~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~n~ 472 (817)
.
T Consensus 345 -------------------------------------------~------------------------------------ 345 (692)
T 2p4e_P 345 -------------------------------------------P------------------------------------ 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------C------------------------------------
T ss_conf -------------------------------------------0------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999734787778782999171007999999830677677650674201367468875433678992234567898888
Q 003470 473 NVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIK 552 (817)
Q Consensus 473 ~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~ 552 (817)
...-+.||+|||.
T Consensus 346 -----------------------------------------------------------------a~~ss~fSn~G~~-- 358 (692)
T 2p4e_P 346 -----------------------------------------------------------------VTLGTLGTNFGRC-- 358 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------------CCCCCCCCCCCCC--
T ss_conf -----------------------------------------------------------------4434666788984--
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
Q ss_conf 98747756568742269971897207999998775577607632765326799999999997399999999999986356
Q 003470 553 DFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTT 632 (817)
Q Consensus 553 ~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA 632 (817)
|||+|||++|+|+++.. ++.|..++|||||||||||++|||+|++|+|+|++||++|++||
T Consensus 359 -----------vDI~APG~~I~St~~~~--------~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA 419 (692)
T 2p4e_P 359 -----------VDLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFS 419 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------EEEEECCCCEEEECCCC--------CCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf -----------04885577678632689--------98667606257999999999999998788999999999999756
Q ss_pred CCCCCCCCCCCCCCCHHHHHH-CCCCCCCCCCCCCC--CCCCCCCC
Q ss_conf 445568984211231034331-02668998335321--28233269
Q 003470 633 TKLDRASRPLQAQQYSETEAM-KLVTATPFDYGSGH--VNPRAALD 675 (817)
Q Consensus 633 ~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~GaG~--id~~~Al~ 675 (817)
.+....+.+...+.....|+. .........+|+|+ .+++.+..
T Consensus 420 ~~~~~~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~~~s 465 (692)
T 2p4e_P 420 AKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 465 (692)
T ss_dssp ----------------------------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4566677777665678985211037875446787853223101567
No 6
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=1.00 E-value=1 Score=466.79 Aligned_cols=319 Identities=25% Similarity=0.392 Sum_probs=258.3
Q ss_pred CCEEEEEECCCCCEEEEECCHHHHHHHHCCCCCEEEECCCEECCCCCCCC----------------CCCCCCCCCCCCCC
Q ss_conf 71179983443016999919988999972999149982611010367898----------------65689988898999
Q 003470 85 TYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTP----------------EFLGLPTGVWPTGG 148 (817)
Q Consensus 85 ~~~~~~~~~~~~ng~sv~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~s~----------------~~~g~~~~~~~~~~ 148 (817)
+.+++++|. .+++++++++++++++|+++|+|++|+++..+++.....+ ..++. +.+|..
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~-~~~w~~-- 98 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKA-PSVWSI-- 98 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTC-GGGGGT--
T ss_pred CCEEEEEEC-CCCEEEEEECHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCH-HHHHHH--
T ss_conf 987999953-6788999979999999972999549997111024578875444556754567856465698-888863--
Q ss_pred CCCCCCCC--EEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCC
Q ss_conf 98888996--1999942123079999899999999999987752233899887667872343422267787530489988
Q 003470 149 GFDRAGED--IVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAV 226 (817)
Q Consensus 149 ~~~~~G~G--V~VaVIDtGiD~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 226 (817)
+ +|+| |+|||||||||++||+|.+. +..+++|..+... .
T Consensus 99 --~-~G~g~~v~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~~~-------~ 139 (395)
T 2z2z_A 99 --T-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------------IAWCVSTLRGKVS-------T 139 (395)
T ss_dssp --C-SSCCTTCEEEEEESCBCTTCTTTGGG-----------------------------EEEEEECGGGCCB-------C
T ss_pred --C-CCCCCCEEEEEECCCCCCCCHHHHHC-----------------------------CCCCCCCCCCCCC-------C
T ss_conf --3-79999579999768989899668606-----------------------------3667656688666-------7
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC-------
Q ss_conf 8999998999876201101027896643356676521321578839999923158988788999999999884-------
Q 003470 227 DFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHD------- 299 (817)
Q Consensus 227 ~~~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~------- 299 (817)
+..++.|+.+|||||||||+|..+. ..+.||||+|+|+.+|++++.+.+..+++++||+|++++
T Consensus 140 ~~~~~~d~~gHGT~vAgiia~~~n~---------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~ 210 (395)
T 2z2z_A 140 KLRDCADQNGHGTHVIGTIAALNND---------IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADK 210 (395)
T ss_dssp CHHHHBCSSSHHHHHHHHHHCCCSS---------SSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSST
T ss_pred CCCCCCCCCCCHHHHHHHHHEECCC---------CCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 8888889998889999999750589---------8548778999899999736999815999999999998575444444
Q ss_pred -------------CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf -------------9959995679999999986677796999999999869339983679989998766789837999311
Q 003470 300 -------------GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAA 366 (817)
Q Consensus 300 -------------g~dVIN~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~ 366 (817)
+++|||||||.... ...+..++.++.++|+++|+||||+|.....+|+..+++|+|||+
T Consensus 211 ~~~~~~~~~~~~~~~~Vin~S~G~~~~--------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~ 282 (395)
T 2z2z_A 211 DGDGIIAGDPDDDAAEVISMSLGGPAD--------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAI 282 (395)
T ss_dssp TCSSCCTTCTTSCCCSEEEECEEBSCC--------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEE
T ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCC--------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 454432356667898699945887888--------989999999998789889997999989888886678987999872
Q ss_pred ECCCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 02850223799289809984314789889814788982644334433446877789963344465466199990024433
Q 003470 367 IDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFV 446 (817)
Q Consensus 367 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~l~~~~~~~~ 446 (817)
..
T Consensus 283 ~~------------------------------------------------------------------------------ 284 (395)
T 2z2z_A 283 DS------------------------------------------------------------------------------ 284 (395)
T ss_dssp CT------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
T ss_conf 69------------------------------------------------------------------------------
Q ss_pred CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE
Q ss_conf 57620777899998639609999553899997347877787829991710079999998306776776506742013674
Q 003470 447 TGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTI 526 (817)
Q Consensus 447 ~g~~~~~~~~~~~~~~Ga~~~i~~n~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (817)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHH
Q ss_conf 68875433678992234567898888987477565687422699718972079999987755776076327653267999
Q 003470 527 GDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIA 606 (817)
Q Consensus 527 ~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VA 606 (817)
.+.++.||+||| +|+|||++|+|+++ ++.|..++||||||||||
T Consensus 285 -----------~~~~a~fS~~G~---------------~v~APG~~i~s~~~----------~~~y~~~sGTS~AaP~Va 328 (395)
T 2z2z_A 285 -----------NDNIASFSNRQP---------------EVSAPGVDILSTYP----------DDSYETLMGTAMATPHVS 328 (395)
T ss_dssp -----------TSCBCTTSCSSC---------------SEEEECSSEEEEET----------TTEEEEEESHHHHHHHHH
T ss_pred -----------CCCCCCCCCCCC---------------CEEECCCCEEEECC----------CCCEEECCCHHHHHHHHH
T ss_conf -----------998886458999---------------87867898165448----------996583277899899999
Q ss_pred HHHHHHHHHCC-------------CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999997399-------------99999999998635644556898421123103433102668998335321282332
Q 003470 607 GIAALVKQKHP-------------YWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAA 673 (817)
Q Consensus 607 G~aALl~q~~p-------------~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaG~id~~~A 673 (817)
|++|||+|++| .|++.+||++|++||+++...+ .++.+|+|+||+.+|
T Consensus 329 G~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g-------------------~~~~~G~G~vd~~~A 389 (395)
T 2z2z_A 329 GVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG-------------------WDADYGYGVVRAALA 389 (395)
T ss_dssp HHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS-------------------SBTTTBTCBCCHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC-------------------CCCCCCCCEECHHHH
T ss_conf 9999999728644565444445468999999999996361568888-------------------787734766579999
Q ss_pred CCC
Q ss_conf 698
Q 003470 674 LDP 676 (817)
Q Consensus 674 l~~ 676 (817)
++.
T Consensus 390 ~~~ 392 (395)
T 2z2z_A 390 VQA 392 (395)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 7
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=1.00 E-value=1 Score=462.18 Aligned_cols=337 Identities=20% Similarity=0.246 Sum_probs=254.5
Q ss_pred CCEEEEEECCCCCEEEEECCHHHHHHHHC-CCCCEEEECCCEECCCCCCCCC-------------C--CCCCCCCCCCCC
Q ss_conf 71179983443016999919988999972-9991499826110103678986-------------5--689988898999
Q 003470 85 TYKKLYSYKHLINGFAVHITPDQAEILQR-APGVKSVERDWKVRRLTTHTPE-------------F--LGLPTGVWPTGG 148 (817)
Q Consensus 85 ~~~~~~~~~~~~ng~sv~~~~~~~~~L~~-~p~V~~v~~~~~~~~~~~~s~~-------------~--~g~~~~~~~~~~ 148 (817)
+.++++.|. .|++|+++++++++++|++ +|+|++|+++..+++....... + +..+..+|..
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~-- 141 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDD-- 141 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGG--
T ss_pred CCEEEEECC-CCCEEEEEECHHHHHHHHHCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHC--
T ss_conf 978999617-73479999499999999846999738976656212455545567788532013267651075777852--
Q ss_pred CCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCC
Q ss_conf 98888996199994212307999989999999999998775223389988766787234342226778753048998889
Q 003470 149 GFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDF 228 (817)
Q Consensus 149 ~~~~~G~GV~VaVIDtGiD~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 228 (817)
+++|+||+|||||||||++||+|.+.. +.+.. .++....|... ..+...+.
T Consensus 142 --~~~G~gv~VaViDtGid~~Hp~~~~~~---------~~~~~-------------~~~~~~~~~~~-----~~~~~~~~ 192 (471)
T 3t41_A 142 --LPKHANTKIAIIDTGVMKNHDDLKNNF---------STDSK-------------NLVPLNGFRGT-----EPEETGDV 192 (471)
T ss_dssp --CCSSCCCCEEEEESCCCTTCTTTTTTB---------CTTCE-------------ECCCTTCGGGC-----CTTCCCCT
T ss_pred --CCCCCCCEEEEEECCCCCCCHHHHCCC---------CCCCC-------------CCCCCCCCCCC-----CCCCCCCC
T ss_conf --489998189999399898995575376---------66775-------------34557874577-----73447887
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 99998999876201101027896643356676521321578839999923158988788999999999884995999567
Q 003470 229 ASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSV 308 (817)
Q Consensus 229 ~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~dVIN~Sl 308 (817)
..+.|+.||||||||||+|+++ +.||||+|+|+++|++++ +.+..+++++||+|+++++++||||||
T Consensus 193 ~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~~-~~~~~~~i~~ai~~a~~~g~~Vin~S~ 259 (471)
T 3t41_A 193 HDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTMYRVFGS-KKTELLWVSKAIVQAANDGNQVINISV 259 (471)
T ss_dssp TCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEEECCSS-SCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCCCCCHHHHEEECCCC------------EEEECCCCEEEEEEECCC-CCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 7776777850056530003786------------068889985999981268-987689999999999867998999689
Q ss_pred CCCCC--CCCC--C----CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC------------------CCCCCCCEEE
Q ss_conf 99999--9998--6----6777969999999998693399836799899987------------------6678983799
Q 003470 309 GPNSP--PATT--K----TTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKT------------------LVSYSPWITT 362 (817)
Q Consensus 309 G~~~~--~~~~--~----~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~------------------~~~~~~~vit 362 (817)
|.... +.+. . ....+.+..++..+.++|+++|+||||+|..... .|+..+++|+
T Consensus 260 G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vit 339 (471)
T 3t41_A 260 GSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVT 339 (471)
T ss_dssp CEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEE
T ss_conf 87877754456654322202679999999999849978999748998677764334556665667750116655797499
Q ss_pred EEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 93110285022379928980998431478988981478898264433443344687778996334446546619999002
Q 003470 363 VAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYS 442 (817)
Q Consensus 363 VgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~l~~~~ 442 (817)
|||++
T Consensus 340 VgA~~--------------------------------------------------------------------------- 344 (471)
T 3t41_A 340 VGSTD--------------------------------------------------------------------------- 344 (471)
T ss_dssp EEEEC---------------------------------------------------------------------------
T ss_pred EEEEC---------------------------------------------------------------------------
T ss_conf 99517---------------------------------------------------------------------------
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf 44335762077789999863960999955389999734787778782999171007999999830677677650674201
Q 003470 443 FNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKG 522 (817)
Q Consensus 443 ~~~~~g~~~~~~~~~~~~~~Ga~~~i~~n~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~ 522 (817)
T Consensus 345 -------------------------------------------------------------------------------- 344 (471)
T 3t41_A 345 -------------------------------------------------------------------------------- 344 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------------------EEEEECCC
Q ss_conf 36746887543367899223456789888898747756568742269971----------------------89720799
Q 003470 523 TGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSL----------------------IWAAWSPN 580 (817)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~~~~~~~KPDI~APG~~----------------------I~Sa~~~~ 580 (817)
..+.++.||+|||+. |||+|||++ |++++
T Consensus 345 --------------~~~~~a~fS~~G~~~------------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~--- 395 (471)
T 3t41_A 345 --------------QKSNLSEFSNFGMNY------------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTA--- 395 (471)
T ss_dssp --------------TTSSBCTTCCBCTTT------------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEEC---
T ss_pred --------------CCCCCCCCCCCCCCC------------CEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECC---
T ss_conf --------------989888766899999------------869955887333344565433455566675068327---
Q ss_pred CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 9998775577607632765326799999999997399-999999999986356445568984211231034331026689
Q 003470 581 GTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHP-YWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTAT 659 (817)
Q Consensus 581 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~ 659 (817)
.++.|..++|||||||||||++|||+|++| .++|++||++|++||.+... .+
T Consensus 396 -------~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~--------------------~~ 448 (471)
T 3t41_A 396 -------NNGRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN--------------------KP 448 (471)
T ss_dssp -------TTSSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC--------------------CC
T ss_pred -------CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC--------------------CC
T ss_conf -------999878525468878999999999998616789999999999984877778--------------------99
Q ss_pred CCCCCCCCCCCCCCCCCC
Q ss_conf 983353212823326987
Q 003470 660 PFDYGSGHVNPRAALDPG 677 (817)
Q Consensus 660 ~~~~GaG~id~~~Al~~~ 677 (817)
...||+|+||+.+|++..
T Consensus 449 ~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 449 FSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHTTCBBCHHHHTTTT
T ss_pred CCCCCCCHHCHHHHHHHH
T ss_conf 676556743799999987
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=1.00 E-value=1 Score=456.95 Aligned_cols=339 Identities=24% Similarity=0.301 Sum_probs=249.8
Q ss_pred CEEEEEECCCCCEEEEECCH----HHHHHHH--CCCCCEEEECCCEECCCCC----CCC---------------------
Q ss_conf 11799834430169999199----8899997--2999149982611010367----898---------------------
Q 003470 86 YKKLYSYKHLINGFAVHITP----DQAEILQ--RAPGVKSVERDWKVRRLTT----HTP--------------------- 134 (817)
Q Consensus 86 ~~~~~~~~~~~ng~sv~~~~----~~~~~L~--~~p~V~~v~~~~~~~~~~~----~s~--------------------- 134 (817)
.++.+++. .+++++++++. +.+++|+ ++|+|++||++..+++... ...
T Consensus 53 ~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (671)
T 1r6v_A 53 GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL 131 (671)
T ss_dssp CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred CEEEEECC-CCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86999707-77689999687489999999985568980699437278840465567643211122233456654556422
Q ss_pred --CC-----CCCCCCC-CCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf --65-----6899888-989999888899619999421230799998999999999999877522338998876678723
Q 003470 135 --EF-----LGLPTGV-WPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKI 206 (817)
Q Consensus 135 --~~-----~g~~~~~-~~~~~~~~~~G~GV~VaVIDtGiD~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki 206 (817)
.. ++++ .+ |.. ++|+||+|||||||||++||+|.+. .+.
T Consensus 132 ~~~~W~l~~I~~~-~a~w~~-----~tG~gV~VAVIDTGVd~~HpdL~~~---------~~~------------------ 178 (671)
T 1r6v_A 132 SNELWGLEAIGVT-QQLWEE-----ASGTNIIVAVVDTGVDGTHPDLEGQ---------VIA------------------ 178 (671)
T ss_dssp GGGCHHHHHTTCC-HHHHHH-----CSCTTCEEEEEESCCBTTSGGGTTT---------BCC------------------
T ss_pred CCCCCCHHCCCCC-HHHHHC-----CCCCCCEEEEEECCCCCCCCCCCCC---------EEE------------------
T ss_conf 3457761006976-422310-----2899978999958989888410155---------771------------------
Q ss_pred EEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECC----C
Q ss_conf 434222677875304899888999998999876201101027896643356676521321578839999923158----9
Q 003470 207 IGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRL----F 282 (817)
Q Consensus 207 ~g~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~----~ 282 (817)
++++..+ ...+ ...+..|+++|||||||||||..+ + ..+.||||+|+|+.+|++++. +
T Consensus 179 --g~~~~~~-----~~~p--~~~d~~d~~gHGThVAGiIAa~~n------g---~gv~GVAP~A~I~~vkv~~~~~~~~g 240 (671)
T 1r6v_A 179 --GYRPAFD-----EELP--AGTDSSYGGSAGTHVAGTIAAKKD------G---KGIVGVAPGAKIMPIVIFDDPALVGG 240 (671)
T ss_dssp --EEEGGGT-----EEEC--TTCBCCTTCSHHHHHHHHHHCCCS------S---SSCCCSCTTSEEEEEESBCCHHHHCT
T ss_pred --CCCCCCC-----CCCC--CCCCCCCCCCCCHHHHHHHHCCCC------C---CCEEEECCCCEEEEEEECCCCCCCCC
T ss_conf --4545678-----7578--888876678843212016341578------8---86177878998999991067655678
Q ss_pred CC--CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC-CCCCCCCCC
Q ss_conf 88--788999999999884995999567999999998667779699999999986933998367998999-876678983
Q 003470 283 GG--FVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP-KTLVSYSPW 359 (817)
Q Consensus 283 ~~--~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-~~~~~~~~~ 359 (817)
.+ ....+++||+||++++++|||||||... +...+..+++++.++|+++|+||||+|... ..+|+..++
T Consensus 241 ~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~--------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~ 312 (671)
T 1r6v_A 241 NGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG--------YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPG 312 (671)
T ss_dssp TSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC--------CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTT
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC--------CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 87468899999999999869979995787887--------7899999999998689889995788887777667555787
Q ss_pred EEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 79993110285022379928980998431478988981478898264433443344687778996334446546619999
Q 003470 360 ITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLC 439 (817)
Q Consensus 360 vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~l~ 439 (817)
+|+|||+.....
T Consensus 313 VItVgA~d~~g~-------------------------------------------------------------------- 324 (671)
T 1r6v_A 313 VIQVAALDYYGG-------------------------------------------------------------------- 324 (671)
T ss_dssp CEEEEEEEEETT--------------------------------------------------------------------
T ss_pred EEEEEEECCCCC--------------------------------------------------------------------
T ss_conf 599998867998--------------------------------------------------------------------
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 00244335762077789999863960999955389999734787778782999171007999999830677677650674
Q 003470 440 GYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKS 519 (817)
Q Consensus 440 ~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~n~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~ 519 (817)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC--------CCCCCCC
Q ss_conf 20136746887543367899223456789888898747756568742269971897207999998--------7755776
Q 003470 520 FKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDE--------ANFVGEG 591 (817)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~--------~~~~~~~ 591 (817)
...++.||+|||.. ||+|||++|+|+++...... ....++.
T Consensus 325 ------------------~~~~a~fSn~G~~v-------------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~ 373 (671)
T 1r6v_A 325 ------------------TFRVAGFSSRSDGV-------------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGT 373 (671)
T ss_dssp ------------------EEEECSSSCCCTTE-------------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCC
T ss_pred ------------------CEEECCCCCCCCCE-------------EEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf ------------------41235646899972-------------69956877785157877655456654211258986
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 07632765326799999999997399999999999986356445568984211231034331026689983353212823
Q 003470 592 FALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPR 671 (817)
Q Consensus 592 y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaG~id~~ 671 (817)
|..++|||||||||||++|||+|++|+|++.+||++|++||+++...+. ...+|+|++|+.
T Consensus 374 y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g~-------------------d~~~G~G~vna~ 434 (671)
T 1r6v_A 374 YDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGW-------------------DHDTGYGLVKLD 434 (671)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSSC-------------------BTTTBTCBCCHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC-------------------CCCCCCCEECHH
T ss_conf 4876476378899999999999778899999999999975837788887-------------------778554351899
Q ss_pred CCCCCCEEEEC
Q ss_conf 32698714306
Q 003470 672 AALDPGLIFDA 682 (817)
Q Consensus 672 ~Al~~~l~~~~ 682 (817)
+|++..+..+.
T Consensus 435 ~Al~~~l~~~~ 445 (671)
T 1r6v_A 435 AALQGPLPTQG 445 (671)
T ss_dssp HHHHCCCCSSS
T ss_pred HHHHHHCCCCC
T ss_conf 98202237888
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=1.00 E-value=1 Score=437.10 Aligned_cols=390 Identities=22% Similarity=0.283 Sum_probs=270.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHH
Q ss_conf 68998889899998888996199994212307999989999999999998775223389988766787234342226778
Q 003470 137 LGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAA 216 (817)
Q Consensus 137 ~g~~~~~~~~~~~~~~~G~GV~VaVIDtGiD~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~ 216 (817)
++++ .+|.. +|+||+|+|||||||++||+|.+. .+ .++++..
T Consensus 11 i~~~-~~w~~------~g~gv~VaViDtGvd~~Hp~l~~~---------~~--------------------~~~~~~~-- 52 (441)
T 1y9z_A 11 VGAT-VLSDS------QAGNRTICIIDSGYDRSHNDLNAN---------NV--------------------TGTNNSG-- 52 (441)
T ss_dssp TTCS-SSCCT------TGGGCEEEEEESCCCTTSTTTTTS---------EE--------------------EECCCTT--
T ss_pred CCHH-HHHHC------CCCCCEEEEECCCCCCCCHHHHCC---------CC--------------------CCCCCCC--
T ss_conf 6955-66425------799838999828879999567457---------33--------------------3765578--
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCC--CEEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 753048998889999989998762011010278966433566765213215788--399999231589887889999999
Q 003470 217 IAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRA--RIAVYKALYRLFGGFVADVVAAID 294 (817)
Q Consensus 217 ~~~~~~~~~~~~~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A--~l~~~kv~~~~~~~~~~~i~~ai~ 294 (817)
..++..+.|+.+|||||||||++..+. ..+.||||+| +|+.+|++++.+.+..+++++||+
T Consensus 53 --------~~~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~ 115 (441)
T 1y9z_A 53 --------TGNWYQPGNNNAHGTHVAGTIAAIANN---------EGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAID 115 (441)
T ss_dssp --------SCCTTCCCSSCCHHHHHHHHHHCCCSS---------SBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHH
T ss_pred --------CCCCCCCCCCCCCHHHHHHHHHCCCCC---------CCCEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHH
T ss_conf --------887788888998577999998526588---------973686478888799999747899848999999999
Q ss_pred HHHHC-CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCEE
Q ss_conf 99884-99599956799999999866777969999999998693399836799899987667898379993110285022
Q 003470 295 QAVHD-GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYK 373 (817)
Q Consensus 295 ~a~~~-g~dVIN~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~~~~~ 373 (817)
||+++ +++|||||||.... ...+..++.++.++|+++|+||||+|.....+++..+++|+|||++.+....
T Consensus 116 ~a~~~~g~~Vin~S~G~~~~--------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~ 187 (441)
T 1y9z_A 116 TCVNSGGANVVTMSLGGSGS--------TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHA 187 (441)
T ss_dssp HHHHTTCCSEEEECCCBSCC--------BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBC
T ss_pred HHHHHCCCCEEEECCCCCCC--------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
T ss_conf 99972598389958887898--------8899999999997899899966999898887877799869999887999877
Q ss_pred EEEEECCCCEEEE-----------------------EECCCCC-CC-CCEEE--EEECCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 3799289809984-----------------------3147898-89-81478--898264433443344687778996-3
Q 003470 374 NHLNLGNGKILAG-----------------------IGLSPAT-HG-NRTFT--LVAANDVLLDSSVMKYSASDCQRP-E 425 (817)
Q Consensus 374 ~~~~~~~g~~~~~-----------------------~~~~~~~-~~-~~~~~--~~~~~~~~~~~~~~~~~~~~c~~~-~ 425 (817)
.+...+....+.. .+++... .+ ...++ +.+...... .........|... .
T Consensus 188 ~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~--g~~~~~~~~C~~~~~ 265 (441)
T 1y9z_A 188 AFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPIN--ASATGALAECTVNGT 265 (441)
T ss_dssp TTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCC--CEEEEEEEEEEEETT
T ss_pred CCCCCCCCEEEEECCCCEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCHHCCCCCCC
T ss_conf 645689964899666876625667886311010156201345657664445677645443224--422100010456655
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCC-----CCCCCCCCCEEEECCCHHHHH
Q ss_conf 344465466199990024433576207778999986396099995538999973-----478777878299917100799
Q 003470 426 VLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTK-----FDPVPVGIPGILITDVTKSMD 500 (817)
Q Consensus 426 ~~~~~~~~gki~l~~~~~~~~~g~~~~~~~~~~~~~~Ga~~~i~~n~~~~~~~~-----~~~~~~~~p~~~i~~~~~g~~ 500 (817)
.++..+++|||++|.|+..- ...+.+..|..+++++|+.++|++|+....+.. .......+|.+.+.. ++|..
T Consensus 266 ~~~~~~~~gkivl~~rg~~~-~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~-~~g~~ 343 (441)
T 1y9z_A 266 SFSCGNMANKICLVERVGNQ-GSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDR-ATGLA 343 (441)
T ss_dssp EEECCCCTTEEEEEECCSCS-SSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECH-HHHHH
T ss_pred CCCCCCCCCCEEEEECCCCC-CCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEH-HHHHH
T ss_conf 55577765558999625667-66530799999999659749999947876554432124556676554799728-88999
Q ss_pred HHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 99998306776776506742013674688754336789922345678988889874775656874226997189720799
Q 003470 501 LVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPN 580 (817)
Q Consensus 501 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~ 580 (817)
+..++.+. +. +++.
T Consensus 344 l~~~~~~~---------------------------------------------------------~t------~~~~--- 357 (441)
T 1y9z_A 344 LKAKLGQS---------------------------------------------------------TT------VSNQ--- 357 (441)
T ss_dssp HHTTTTSE---------------------------------------------------------EE------EEEE---
T ss_pred HHHHHCCC---------------------------------------------------------CC------CCCC---
T ss_conf 99874687---------------------------------------------------------51------2355---
Q ss_pred CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 99987755776076327653267999999999973999999999999863564455689842112310343310266899
Q 003470 581 GTDEANFVGEGFALISGTSMAAPHIAGIAALVKQKHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATP 660 (817)
Q Consensus 581 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 660 (817)
.++.|..+||||||||||||++|||+|+||+|+|++||++||+||++++..+. +
T Consensus 358 -------~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~-------------------~ 411 (441)
T 1y9z_A 358 -------GNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAGR-------------------D 411 (441)
T ss_dssp -------EEESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSSC-------------------B
T ss_pred -------CCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHCCCCC-------------------C
T ss_conf -------68875245364157753104899998777789999999999850600046898-------------------4
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCC
Q ss_conf 833532128233269871430672001100236998
Q 003470 661 FDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTPG 696 (817)
Q Consensus 661 ~~~GaG~id~~~Al~~~l~~~~~~~~~~~~~~~~~~ 696 (817)
.+||+|+||+.+|+ +|+.|+|+.+.
T Consensus 412 ~~~G~G~vn~~~A~-----------~~~~~lc~~~~ 436 (441)
T 1y9z_A 412 NQTGYGMINAVAAK-----------AYLDESCTGPT 436 (441)
T ss_dssp TTTBTCBCCHHHHH-----------HHHHHCTTCC-
T ss_pred CCCCCCCCCHHHHH-----------HHHHHHHCCCC
T ss_conf 23366516799999-----------99886316799
No 10
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=1.00 E-value=1 Score=426.53 Aligned_cols=308 Identities=22% Similarity=0.203 Sum_probs=222.2
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCEEEEEEHHH
Q ss_conf 899888989999888899619999421230799998999999999999877522338998876---67872343422267
Q 003470 138 GLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRS---FCNGKIIGAQHFAE 214 (817)
Q Consensus 138 g~~~~~~~~~~~~~~~G~GV~VaVIDtGiD~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~n~ki~g~~~~~~ 214 (817)
++. .+|.. +..|++|+|||||||||++||+|++...... ...|.+.++........ ....+...++.+..
T Consensus 19 G~~-~~w~~----~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (357)
T 4h6x_A 19 GLA-DLHNQ----TLGDPQITIVIIDGDPDYTLSCFEGAEVSKV--FPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEE 91 (357)
T ss_dssp THH-HHHHH----CSCCTTSEEEEEESCCCTTSGGGTTCEEEEC--CCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHH
T ss_pred CHH-HHHHH----CCCCCCCEEEEECCCCCCCCHHHCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999-99972----3899997899972898999965758886655--5433466556676545566543576555532345
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCC-----CCHHHH
Q ss_conf 787530489988899999899987620110102789664335667652132157883999992315898-----878899
Q 003470 215 AAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFG-----GFVADV 289 (817)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~D~~gHGThVAGIiag~~~~~~~~~G~~~g~~~GVAP~A~l~~~kv~~~~~~-----~~~~~i 289 (817)
.. .....+..++.|++||||||||||||+.+. .+.||||+|+|+.+|++....+ ....++
T Consensus 92 ~~-----~~~~~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~ 156 (357)
T 4h6x_A 92 AL-----EAVIPDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNL 156 (357)
T ss_dssp HH-----HHHCTTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHH
T ss_pred CC-----CCCCCCCCCCCCCCCCHHHHHHHHHCCCCC----------CCEEEECCCEEEEEEECCCCCCCCCCCCCHHHH
T ss_conf 66-----555678888767788679998987415788----------705860101487664102678885443249999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 99999998849959995679999999986677796999999999869339983679989998766789837999311028
Q 003470 290 VAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDD 369 (817)
Q Consensus 290 ~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~~~~vitVgA~~~~ 369 (817)
+++++|+++++++|||||||....... ..+.+..++.++.++|+++|+||||+|.....+|+..+++|+|||+..
T Consensus 157 ~~ai~~a~~~g~~Vin~S~G~~~~~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~- 231 (357)
T 4h6x_A 157 ARAIDLALELGANIIHCAFCRPTQTSE----GEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV- 231 (357)
T ss_dssp HHHHHHHHHTTCSEEEEC---------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCC----CHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC-
T ss_conf 999999997499878513446776544----106799999998628858996225789876757655899715787436-
Q ss_pred CCEEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 50223799289809984314789889814788982644334433446877789963344465466199990024433576
Q 003470 370 RRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGT 449 (817)
Q Consensus 370 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~gki~l~~~~~~~~~g~ 449 (817)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCC
Q ss_conf 20777899998639609999553899997347877787829991710079999998306776776506742013674688
Q 003470 450 ASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDG 529 (817)
Q Consensus 450 ~~~~~~~~~~~~~Ga~~~i~~n~~~~~~~~~~~~~~~~p~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (817)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 75433678992234567898888987477565687422699718972079999987755776076327653267999999
Q 003470 530 LMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGEGFALISGTSMAAPHIAGIA 609 (817)
Q Consensus 530 ~~~~~~~~~~~~a~fSS~GP~~~~~~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~a 609 (817)
.+.++.||+||+. ..||||+|||++|+|+.+. ++.|..++|||||||||||++
T Consensus 232 --------~~~~~~fSn~G~~----------~~~~di~APG~~i~s~~~~---------~~~~~~~sGTS~AaP~vaG~~ 284 (357)
T 4h6x_A 232 --------DGTPCHFSNWGGN----------NTKEGILAPGEEILGAQPC---------TEEPVRLTGTSMAAPVMTGIS 284 (357)
T ss_dssp --------TSSBCTTCC---C----------TTTTEEEEECSSEEECCTT---------CSCCEEECSHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCCC----------CCCCCEEECCCCEEECCCC---------CCCCCCCCCHHHHHHHHHHHH
T ss_conf --------8863342567888----------7765266167876742589---------985440581899999999999
Q ss_pred HHHHH----HCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99997----39999999999998635644556898421123103433102668998335321282332698
Q 003470 610 ALVKQ----KHPYWSPAAIKSALMTTTTKLDRASRPLQAQQYSETEAMKLVTATPFDYGSGHVNPRAALDP 676 (817)
Q Consensus 610 ALl~q----~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaG~id~~~Al~~ 676 (817)
|||++ ++|.|++++||.+|++||++++... ...+.++|+|+||+.+|++.
T Consensus 285 All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~-----------------~~~~~~~G~G~vn~~~A~~~ 338 (357)
T 4h6x_A 285 ALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV-----------------VEEPERCLRGFVNIPGAMKV 338 (357)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHC-------------------------------CTTCBCCHHHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC-----------------CCCCCCCEEEEECHHHHHHH
T ss_conf 9999960865799879999999994395689988-----------------88766540477529999999
Done!