Query 003475
Match_columns 816
No_of_seqs 453 out of 3325
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 17:50:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003475.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1525-1529//hhsearch_pdb/003475hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fie_A Serine/threonine-protei 1.0 1 1 443.4 21.9 258 104-457 146-408 (423)
2 4fih_A Serine/threonine-protei 1.0 1 1 442.6 21.3 256 106-457 71-331 (346)
3 4b9d_A Serine/threonine-protei 1.0 1 1 441.4 20.3 253 109-456 24-283 (350)
4 4b99_A Mitogen-activated prote 1.0 1 1 440.6 26.3 283 107-458 52-353 (398)
5 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 430.6 20.2 254 109-460 32-301 (311)
6 3uto_A Twitchin; kinase, muscl 1.0 1 1 427.4 21.6 261 108-459 156-420 (573)
7 3ubd_A Ribosomal protein S6 ki 1.0 1 1 423.6 13.3 252 109-458 24-290 (304)
8 3hyh_A Carbon catabolite-derep 1.0 1 1 422.4 20.9 249 109-455 13-268 (275)
9 4f9c_A Cell division cycle 7-r 1.0 1 1 421.8 23.6 304 107-457 19-360 (361)
10 3v5w_A G-protein coupled recep 1.0 1 1 421.0 18.6 261 107-459 187-459 (689)
No 1
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=443.42 Aligned_cols=258 Identities=23% Similarity=0.401 Sum_probs=221.5
Q ss_pred CCCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEE
Q ss_conf 4556774699998424785269984136799099999971683-669999999999999620039889864449978986
Q 003475 104 NAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (816)
Q Consensus 104 ~~~~~~rY~i~~~LG~G~fG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~ 182 (816)
..+..++|+++++||+|+||.||+|+++.+++.||||++.... ...+.+.+|+.+|+.+ .|||||+++++|.
T Consensus 146 ~~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-------~HpnIV~l~~~~~ 218 (423)
T 4fie_A 146 PGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-------QHENVVEMYNSYL 218 (423)
T ss_dssp SSCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-------CCTTBCCEEEEEE
T ss_pred CCCHHHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHC-------CCCCCCCEEEEEE
T ss_conf 998268438616962481848999999999989999998625546899999999999857-------9989871689999
Q ss_pred ECEEEEEEEECCCC-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 14024898732761-17999997306999999999999955411012433724613688986211267889608996135
Q 003475 183 CQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (816)
Q Consensus 183 ~~~~l~LVmE~l~g-sL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFG 261 (816)
..+.+|||||||.| +|.++++.. .+++..++.|++||+.||.|||+++||||||||+||||+ .++.+||+|||
T Consensus 219 ~~~~~~iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~---~~g~vKl~DFG 292 (423)
T 4fie_A 219 VGDELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFG 292 (423)
T ss_dssp ETTEEEEEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC---TTCCEEECCCT
T ss_pred ECCEEEEEEECCCCCCHHHHHHCC---CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEC---CCCCEEEECCC
T ss_conf 899999999698998289887616---989999999999999999999988904465787778985---89998980372
Q ss_pred CCCCCC---CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 642358---73100014645568400137855653126779999999983999999999799999999993899966778
Q 003475 262 SACTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (816)
Q Consensus 262 lA~~~~---~~~~~~~gT~~Y~APEvl~g~~ys~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~lg~~Pp~~~l 338 (816)
+|+... ....+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+..|..... +..
T Consensus 293 la~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~-- 367 (423)
T 4fie_A 293 FCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRL-- 367 (423)
T ss_dssp TCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCC--
T ss_pred CCEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC---CCC--
T ss_conf 654777887643466647472799997799999689999999999999978799898699999999972799---887--
Q ss_pred HHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 86310110124038765456885335776301124599999875126768753345552578984088777887122345
Q 003475 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (816)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~~~~~~~e~~~~ 418 (816)
+ .
T Consensus 368 -------------------------------------------------------------------~-----------~ 369 (423)
T 4fie_A 368 -------------------------------------------------------------------K-----------N 369 (423)
T ss_dssp -------------------------------------------------------------------S-----------C
T ss_pred -------------------------------------------------------------------C-----------C
T ss_conf -------------------------------------------------------------------6-----------5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 687689999999971203969999999998097778999
Q 003475 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (816)
Q Consensus 419 ~~~~s~~l~DLI~~mL~~DP~kRpTa~eaL~HPff~~~~ 457 (816)
...+++.+.|||.+||+.||++|+|+.|+|+||||++..
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 012999999999998678956890999996098756899
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=442.61 Aligned_cols=256 Identities=23% Similarity=0.405 Sum_probs=220.5
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEC
Q ss_conf 56774699998424785269984136799099999971683-66999999999999962003988986444997898614
Q 003475 106 ETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (816)
Q Consensus 106 ~~~~rY~i~~~LG~G~fG~Vyka~d~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~~~ 184 (816)
++..+|++.++||+|+||+||+|+++.+++.||||+++... ...+.+.+|+.+|+.+ +|||||+++++|..+
T Consensus 71 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-------~HpnIV~l~~~~~~~ 143 (346)
T 4fih_A 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-------QHENVVEMYNSYLVG 143 (346)
T ss_dssp CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-------CCTTBCCEEEEEEET
T ss_pred CHHHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEEC
T ss_conf 8157538707960272829999999899989999998527656899999999999867-------998999199999989
Q ss_pred EEEEEEEECCCC-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 024898732761-1799999730699999999999995541101243372461368898621126788960899613564
Q 003475 185 RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (816)
Q Consensus 185 ~~l~LVmE~l~g-sL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFGlA 263 (816)
+.+|||||||+| +|.+++.. ..+++..++.+++||+.||.|||+++||||||||+||||+ .++.+||+|||+|
T Consensus 144 ~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla 217 (346)
T 4fih_A 144 DELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC 217 (346)
T ss_dssp TEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred CEEEEEEECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC---CCCCEEEECCCCC
T ss_conf 999999969899808999871---8989999999999999999999988835562788997887---9998899027575
Q ss_pred CCCC---CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 2358---7310001464556840013785565312677999999998399999999979999999999389996677886
Q 003475 264 CTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE 340 (816)
Q Consensus 264 ~~~~---~~~~~~~gT~~Y~APEvl~g~~ys~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~lg~~Pp~~~l~~ 340 (816)
+... ....+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..|..... +..
T Consensus 218 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~---- 290 (346)
T 4fih_A 218 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRL---- 290 (346)
T ss_dssp EECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---CCC----
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC---CCC----
T ss_conf 3667887753465627582799997799999689999999999999978799898599999999971799---988----
Q ss_pred HHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 31011012403876545688533577630112459999987512676875334555257898408877788712234568
Q 003475 341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES 420 (816)
Q Consensus 341 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~~~~~~~e~~~~~~ 420 (816)
....
T Consensus 291 ----------------------------------------------------------------------------~~~~ 294 (346)
T 4fih_A 291 ----------------------------------------------------------------------------KNLH 294 (346)
T ss_dssp ----------------------------------------------------------------------------SCGG
T ss_pred ----------------------------------------------------------------------------CCCC
T ss_conf ----------------------------------------------------------------------------7502
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 7689999999971203969999999998097778999
Q 003475 421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (816)
Q Consensus 421 ~~s~~l~DLI~~mL~~DP~kRpTa~eaL~HPff~~~~ 457 (816)
.+++++.|||.+||+.||++|+|++|+|+||||++..
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 2999999999998679956890999996098656899
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=441.36 Aligned_cols=253 Identities=24% Similarity=0.347 Sum_probs=222.9
Q ss_pred CCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECC---HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECE
Q ss_conf 7469999842478526998413679909999997168---3669999999999999620039889864449978986140
Q 003475 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR 185 (816)
Q Consensus 109 ~rY~i~~~LG~G~fG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~~~~ 185 (816)
++|+++++||+|+||+||+|+++.+++.||||+++.. ....+.+.+|+++|+.| +|||||+++++|.+++
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-------~HpnIV~~~~~~~~~~ 96 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-------KHPNIVQYRESFEENG 96 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEEETT
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHC-------CCCCCCCEEEEEEECC
T ss_conf 255884797027793999999889998999999865878979999999999999877-------9989891999999899
Q ss_pred EEEEEEECCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 2489873276-117999997306999999999999955411012433724613688986211267889608996135642
Q 003475 186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (816)
Q Consensus 186 ~l~LVmE~l~-gsL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFGlA~ 264 (816)
.+|||||||. |+|.+++.......+++..++.|+.||+.||.|||+++||||||||+||||+ .++.+||+|||+|+
T Consensus 97 ~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~ 173 (350)
T 4b9d_A 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIAR 173 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC---TTCCEEECSTTEES
T ss_pred EEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEC---CCCCEEECCCCCCE
T ss_conf 999999488998399999973899997899999999999999999989915135978997987---89998976465214
Q ss_pred CCCCC---CEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 35873---100014645568400137855653126779999999983999999999799999999993899966778863
Q 003475 265 TEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (816)
Q Consensus 265 ~~~~~---~~~~~gT~~Y~APEvl~g~~ys~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~lg~~Pp~~~l~~~ 341 (816)
..... ....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+++.+|..... |+.
T Consensus 174 ~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~--~~~------ 245 (350)
T 4b9d_A 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF--PPV------ 245 (350)
T ss_dssp CCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC--CCC------
T ss_pred EECCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC--CCC------
T ss_conf 406885410145788360399998799989599999999999999978799899699999999980899--999------
Q ss_pred HCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 10110124038765456885335776301124599999875126768753345552578984088777887122345687
Q 003475 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (816)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~~~~~~~e~~~~~~~ 421 (816)
. ..
T Consensus 246 ------------------------------------------------------------------~-----------~~ 248 (350)
T 4b9d_A 246 ------------------------------------------------------------------S-----------LH 248 (350)
T ss_dssp ------------------------------------------------------------------C-----------TT
T ss_pred ------------------------------------------------------------------C-----------CC
T ss_conf ------------------------------------------------------------------7-----------55
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 68999999997120396999999999809777899
Q 003475 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE 456 (816)
Q Consensus 422 ~s~~l~DLI~~mL~~DP~kRpTa~eaL~HPff~~~ 456 (816)
++.++.+||.+||+.||++|||++|+|+||||++.
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 79999999999855896679089999639976167
No 4
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=440.55 Aligned_cols=283 Identities=29% Similarity=0.521 Sum_probs=231.1
Q ss_pred CCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECC---HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE
Q ss_conf 677469999842478526998413679909999997168---36699999999999996200398898644499789861
Q 003475 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (816)
Q Consensus 107 ~~~rY~i~~~LG~G~fG~Vyka~d~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~~ 183 (816)
..++|++++.||+|+||+||+|+++.+++.||||++++. ....+.+++|+++|+.| .|||||++++++..
T Consensus 52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-------~HpnIv~l~~~~~~ 124 (398)
T 4b99_A 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-------KHDNIIAIKDILRP 124 (398)
T ss_dssp CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-------CCTTBCCEEEECCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHC-------CCCCCCEEEEEEEC
T ss_conf 78974898898426084999999989998999999874003468899999999999866-------79995417655520
Q ss_pred C------EEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEE
Q ss_conf 4------0248987327611799999730699999999999995541101243372461368898621126788960899
Q 003475 184 Q------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI 257 (816)
Q Consensus 184 ~------~~l~LVmE~l~gsL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL 257 (816)
. +.+|||||||+|+|.+++... +.+++..++.+++||+.||.|||+++||||||||+|||++ ..+.+||
T Consensus 125 ~~~~~~~~~~~ivmE~~~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~---~~~~~Ki 199 (398)
T 4b99_A 125 TVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN---ENCELKI 199 (398)
T ss_dssp SSCTTTCCCEEEEEECCSEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTCCEEE
T ss_pred CCCCCCCCEEEEEEECCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC---CCCCEEE
T ss_conf 3554668879999837999889999865--9999999999999999999999988676787371335427---8887787
Q ss_pred EECCCCCCCC-------CCCEEECCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 6135642358-------731000146455684001378-55653126779999999983999999999799999999993
Q 003475 258 IDFGSACTED-------RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL 329 (816)
Q Consensus 258 ~DFGlA~~~~-------~~~~~~~gT~~Y~APEvl~g~-~ys~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~l 329 (816)
+|||+|+... ....+.+||+.|+|||++.+. .|+.++||||+|||+|||++|++||.+.+..+++..|.+..
T Consensus 200 ~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~ 279 (398)
T 4b99_A 200 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 279 (398)
T ss_dssp CCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHH
T ss_pred EECCEEEECCCCCCCCCCCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 22143421346754566665662558676487876278889972221116899999997889989889899999999703
Q ss_pred CCCCCHHHHHHHHCC--CHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 899966778863101--101240387654568853357763011245999998751267687533455525789840887
Q 003475 330 GAQPPDYVLKEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPY 407 (816)
Q Consensus 330 g~~Pp~~~l~~~~~~--~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~ 407 (816)
+ .|+...+...... ..+.... .......++.+.+.
T Consensus 280 g-~p~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~--- 316 (398)
T 4b99_A 280 G-TPSPAVIQAVGAERVRAYIQSL---------------------------------------PPRQPVPWETVYPG--- 316 (398)
T ss_dssp C-CCCGGGTC-----CHHHHHHSS---------------------------------------CCCCCCCHHHHSTT---
T ss_pred C-CCCHHHHHHHHHHHHHHHHHCC---------------------------------------CCCCCCCHHHHCCC---
T ss_conf 8-9986776331002345555307---------------------------------------87688788985879---
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 778871223456876899999999712039699999999980977789999
Q 003475 408 RKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF 458 (816)
Q Consensus 408 ~~~~~~e~~~~~~~~s~~l~DLI~~mL~~DP~kRpTa~eaL~HPff~~~~~ 458 (816)
.+.+++|||.+||++||++|+||+|||+||||++...
T Consensus 317 --------------~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 353 (398)
T 4b99_A 317 --------------ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 353 (398)
T ss_dssp --------------CCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred --------------CCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf --------------9999999999977499557918999965972386889
No 5
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=430.57 Aligned_cols=254 Identities=26% Similarity=0.445 Sum_probs=221.3
Q ss_pred CCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECC----HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEC
Q ss_conf 7469999842478526998413679909999997168----366999999999999962003988986444997898614
Q 003475 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (816)
Q Consensus 109 ~rY~i~~~LG~G~fG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~~~ 184 (816)
++|++++.||+|+||+||+|+++.+++.||||++.+. ....+.+.+|+++|+.+ +|||||+++++|.++
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-------~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHPFFVKLYFTFQDD 104 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-------CCTTBCCEEEEEECS
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHC-------CCCCCCEEEEEEEEC
T ss_conf 2368988983164849999999999989999998888877978999999999999867-------998989199999738
Q ss_pred EEEEEEEECCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 02489873276-11799999730699999999999995541101243372461368898621126788960899613564
Q 003475 185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA 263 (816)
Q Consensus 185 ~~l~LVmE~l~-gsL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFGlA 263 (816)
+.+|||||||. |+|.++++.. +.+++..++.+++||+.||.|||+++||||||||+|||++ .++.+||+|||+|
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~---~~g~vKl~DFGla 179 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA 179 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred CEEEEEEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC---CCCCEEEEECCCC
T ss_conf 9899999648998999999874--9999999999999999999999988782687878996985---8988899876875
Q ss_pred CCCC-----CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 2358-----73100014645568400137855653126779999999983999999999799999999993899966778
Q 003475 264 CTED-----RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (816)
Q Consensus 264 ~~~~-----~~~~~~~gT~~Y~APEvl~g~~ys~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~lg~~Pp~~~l 338 (816)
+... ....+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+++.+|.+..-.. |
T Consensus 180 ~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~-p---- 254 (311)
T 4aw0_A 180 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF-P---- 254 (311)
T ss_dssp EECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-C----
T ss_pred EECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCC-C----
T ss_conf 02577877654367556803079989768999968989989999999974989989979999999997199999-9----
Q ss_pred HHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 86310110124038765456885335776301124599999875126768753345552578984088777887122345
Q 003475 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (816)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~~~~~~~e~~~~ 418 (816)
T Consensus 255 -------------------------------------------------------------------------------- 254 (311)
T 4aw0_A 255 -------------------------------------------------------------------------------- 254 (311)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHCCCCCCCCCCCC
Q ss_conf 6876899999999712039699999999------98097778999999
Q 003475 419 ESQIRLALVDFLKGLVEFDPAKRWSPFQ------ASRHPFVTGEPFTC 460 (816)
Q Consensus 419 ~~~~s~~l~DLI~~mL~~DP~kRpTa~e------aL~HPff~~~~~~~ 460 (816)
..++++++|||.+||+.||++|+|++| +++||||++..|..
T Consensus 255 -~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~ 301 (311)
T 4aw0_A 255 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301 (311)
T ss_dssp -TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred -CCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCHHH
T ss_conf -65699999999997628975780967975877987798758989899
No 6
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=427.41 Aligned_cols=261 Identities=26% Similarity=0.397 Sum_probs=224.6
Q ss_pred CCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECEE
Q ss_conf 77469999842478526998413679909999997168-36699999999999996200398898644499789861402
Q 003475 108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH 186 (816)
Q Consensus 108 ~~rY~i~~~LG~G~fG~Vyka~d~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~~~~~ 186 (816)
.++|++++.||+|+||.||+|+++.+++.||+|+++.. ....+.+.+|+.+|+.| +|||||+++++|...+.
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-------~hpnIv~l~~~~~~~~~ 228 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-------RHPTLVNLHDAFEDDNE 228 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-------CCTTBCCEEEEEECSSE
T ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHC-------CCCCCCEEEEEEEECCE
T ss_conf 53618988996164849999999889989999999152420599999999999868-------99898949999998998
Q ss_pred EEEEEECCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 489873276-1179999973069999999999999554110124337246136889862112678896089961356423
Q 003475 187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT 265 (816)
Q Consensus 187 l~LVmE~l~-gsL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFGlA~~ 265 (816)
+|||||||. |+|.+++.... ..+++..++.+++||+.||.|||+++|+||||||+|||++.+ ..+.+||+|||+|+.
T Consensus 229 ~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 229 MVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAH 306 (573)
T ss_dssp EEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEE
T ss_pred EEEEEEECCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCC-CCCCEEEEECCCEEE
T ss_conf 899986069995999999867-999999999999999999999998892305687655121478-889789940663068
Q ss_pred CC--CCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHC
Q ss_conf 58--7310001464556840013785565312677999999998399999999979999999999389996677886310
Q 003475 266 ED--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN 343 (816)
Q Consensus 266 ~~--~~~~~~~gT~~Y~APEvl~g~~ys~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~lg~~Pp~~~l~~~~~ 343 (816)
.. ......+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+.+..+.+..|.......++..
T Consensus 307 ~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~------- 379 (573)
T 3uto_A 307 LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA------- 379 (573)
T ss_dssp CCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGG-------
T ss_pred CCCCCCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC-------
T ss_conf 5699823234779451499996899989699999999999999978799798699999999984899989532-------
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 11012403876545688533577630112459999987512676875334555257898408877788712234568768
Q 003475 344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR 423 (816)
Q Consensus 344 ~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~~~~~~~e~~~~~~~~s 423 (816)
...++
T Consensus 380 ---------------------------------------------------------------------------~~~~s 384 (573)
T 3uto_A 380 ---------------------------------------------------------------------------FSGIS 384 (573)
T ss_dssp ---------------------------------------------------------------------------GTTSC
T ss_pred ---------------------------------------------------------------------------CCCCC
T ss_conf ---------------------------------------------------------------------------46899
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf 999999997120396999999999809777899999
Q 003475 424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT 459 (816)
Q Consensus 424 ~~l~DLI~~mL~~DP~kRpTa~eaL~HPff~~~~~~ 459 (816)
..++|||.+||++||++|+|+.|+|+||||+....+
T Consensus 385 ~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~ 420 (573)
T 3uto_A 385 EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP 420 (573)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred HHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCC
T ss_conf 999999998864895689299999539574879898
No 7
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=423.60 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=215.8
Q ss_pred CCEEEEEEECCCCCEEEEEEECC---CCCEEEEEEEEECCH---HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEE
Q ss_conf 74699998424785269984136---799099999971683---669999999999999620039889864449978986
Q 003475 109 RRYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (816)
Q Consensus 109 ~rY~i~~~LG~G~fG~Vyka~d~---~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~ 182 (816)
++|++++.||+|+||+||+|++. .+++.||||++++.. .....+.+|+++|+.+ +|||||+++++|.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-------~HpnIv~l~~~~~ 96 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-------NHPFIVKLHYAFQ 96 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-------CCTTEECEEEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHC-------CCCCCCEEEEEEE
T ss_conf 565898897218883999999855887897999999815776847899999999999877-------9979990999999
Q ss_pred ECEEEEEEEECCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 1402489873276-117999997306999999999999955411012433724613688986211267889608996135
Q 003475 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (816)
Q Consensus 183 ~~~~l~LVmE~l~-gsL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFG 261 (816)
.++.+|||||||. |+|.+++... +.+++..++.+++||+.||.|||+++||||||||+|||++ .++.+||+|||
T Consensus 97 ~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFG 171 (304)
T 3ubd_A 97 TEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFG 171 (304)
T ss_dssp ETTEEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTSCEEEESSE
T ss_pred ECCEEEEEEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC---CCCCEEECCCC
T ss_conf 899999999757998889999755--9999999999999999999999977995888878995786---89988762366
Q ss_pred CCCCC---CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 64235---873100014645568400137855653126779999999983999999999799999999993899966778
Q 003475 262 SACTE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL 338 (816)
Q Consensus 262 lA~~~---~~~~~~~~gT~~Y~APEvl~g~~ys~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~lg~~Pp~~~l 338 (816)
+|+.. .....+.+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..|.+... ..|
T Consensus 172 la~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~p---- 246 (304)
T 3ubd_A 172 LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-GMP---- 246 (304)
T ss_dssp EEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCC----
T ss_pred CCEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC-CCC----
T ss_conf 343326887630454418150799996568878777636119999999859899898499999999971899-998----
Q ss_pred HHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 86310110124038765456885335776301124599999875126768753345552578984088777887122345
Q 003475 339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK 418 (816)
Q Consensus 339 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~~~~~~~e~~~~ 418 (816)
T Consensus 247 -------------------------------------------------------------------------------- 246 (304)
T 3ubd_A 247 -------------------------------------------------------------------------------- 246 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHCCCCCCCCCC
Q ss_conf 6876899999999712039699999-----999980977789999
Q 003475 419 ESQIRLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF 458 (816)
Q Consensus 419 ~~~~s~~l~DLI~~mL~~DP~kRpT-----a~eaL~HPff~~~~~ 458 (816)
..+++++.|||.+||+.||++|+| ++|+|+||||++..|
T Consensus 247 -~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw 290 (304)
T 3ubd_A 247 -QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW 290 (304)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred -CCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCH
T ss_conf -76899999999998646987879998678999976904037899
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=422.41 Aligned_cols=249 Identities=24% Similarity=0.374 Sum_probs=217.0
Q ss_pred CCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECC----HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEC
Q ss_conf 7469999842478526998413679909999997168----366999999999999962003988986444997898614
Q 003475 109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ 184 (816)
Q Consensus 109 ~rY~i~~~LG~G~fG~Vyka~d~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~~~ 184 (816)
++|++.+.||+|+||+||+|+++.+++.||||++++. ......+.+|+++++.+ +|||||++++++..+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-------~HpnIv~~~~~~~~~ 85 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-------RHPHIIKLYDVIKSK 85 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-------CCTTBCCEEEEEECS
T ss_pred ECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHC-------CCCCCCEEEEEEEEC
T ss_conf 3868999982176819999999999989999998378867878999999999999877-------998999299999989
Q ss_pred EEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 02489873276117999997306999999999999955411012433724613688986211267889608996135642
Q 003475 185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC 264 (816)
Q Consensus 185 ~~l~LVmE~l~gsL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFGlA~ 264 (816)
+.+|||||||+|+|.+++... +.+++..++.+++||+.||.|||+++|+||||||+|||++ .++.+||+|||+|+
T Consensus 86 ~~~~ivmEy~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~---~~~~vkl~DFGla~ 160 (275)
T 3hyh_A 86 DEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSN 160 (275)
T ss_dssp SEEEEEEECCCEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTCCEEECCSSCC-
T ss_pred CEEEEEEECCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEC---CCCCEEEEECCCCE
T ss_conf 989999927899789999874--9999999999999999999999988930666875876887---99989994547772
Q ss_pred CCC--CCCEEECCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 358--73100014645568400137855-653126779999999983999999999799999999993899966778863
Q 003475 265 TED--RTVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA 341 (816)
Q Consensus 265 ~~~--~~~~~~~gT~~Y~APEvl~g~~y-s~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~lg~~Pp~~~l~~~ 341 (816)
... ....+.+||+.|+|||++.+..| +.++||||+||++|+|++|++||.+.+..+.+..|.+... ..
T Consensus 161 ~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~-~~-------- 231 (275)
T 3hyh_A 161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY-TL-------- 231 (275)
T ss_dssp --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-CC--------
T ss_pred ECCCCCCCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC-CC--------
T ss_conf 667887467702893527745506898889836568789999999988799899899999999974999-99--------
Q ss_pred HCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 10110124038765456885335776301124599999875126768753345552578984088777887122345687
Q 003475 342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ 421 (816)
Q Consensus 342 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~~~~~~~e~~~~~~~ 421 (816)
+ ..
T Consensus 232 ------------------------------------------------------------------p-----------~~ 234 (275)
T 3hyh_A 232 ------------------------------------------------------------------P-----------KF 234 (275)
T ss_dssp ------------------------------------------------------------------C-----------TT
T ss_pred ------------------------------------------------------------------C-----------CC
T ss_conf ------------------------------------------------------------------8-----------77
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 6899999999712039699999999980977789
Q 003475 422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG 455 (816)
Q Consensus 422 ~s~~l~DLI~~mL~~DP~kRpTa~eaL~HPff~~ 455 (816)
.++.+.|||.+||+.||++|+|++|+|+||||+.
T Consensus 235 ~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred CCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 9999999999986589668919999971920065
No 9
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=1.00 E-value=1 Score=421.80 Aligned_cols=304 Identities=22% Similarity=0.338 Sum_probs=222.1
Q ss_pred CCCCEEEEEEECCCCCEEEEEEECC---CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEE
Q ss_conf 6774699998424785269984136---7990999999716836699999999999996200398898644499789861
Q 003475 107 TQRRYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC 183 (816)
Q Consensus 107 ~~~rY~i~~~LG~G~fG~Vyka~d~---~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~~ 183 (816)
..++|++.++||+|+||+||+|+++ .+++.||+|++.... ...++.+|+++|+.+. +||||++++++|..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~------~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAG------GQDNVMGVKYCFRK 91 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTC------SBTTBCCCSEEEEE
T ss_pred CCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEECCCC-CHHHHHHHHHHHHHHC------CCCCCCEEEEEEEE
T ss_conf 5682799899822618199999971668989789999975666-7999999999999715------99987669999998
Q ss_pred CEEEEEEEECCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 402489873276-1179999973069999999999999554110124337246136889862112678896089961356
Q 003475 184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS 262 (816)
Q Consensus 184 ~~~l~LVmE~l~-gsL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFGl 262 (816)
.+++|||||||+ ++|.+++. .+++.+++.+++||+.||.|||++|||||||||+|||++ .+.+.+||+|||+
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~--~~~~~~kl~DFGl 164 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN--RRLKKYALVDFGL 164 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTT
T ss_pred CCEEEEEEECCCCCCHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEE--CCCCEEEECCCCC
T ss_conf 999999993788521999872-----899999999999999999999978917575877996885--8999189776777
Q ss_pred CCCCCC-------------------------------CCEEECCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 423587-------------------------------31000146455684001378-5565312677999999998399
Q 003475 263 ACTEDR-------------------------------TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGL 310 (816)
Q Consensus 263 A~~~~~-------------------------------~~~~~~gT~~Y~APEvl~g~-~ys~ksDIWSLGvIL~ELltG~ 310 (816)
|+.... .....+||+.|+|||++.+. .|+.++||||+|||+|||++|+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 74367765321222333332233444544322356541146556733269899808999898210454299999999788
Q ss_pred CCC-CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHCCCCC
Q ss_conf 999-999979999999999389996677886310110124038765456885335776301124599999-875126768
Q 003475 311 PLF-PGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYE-ARELKKPLI 388 (816)
Q Consensus 311 ~PF-~g~s~~e~l~~I~~~lg~~Pp~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e-~~~~~~~~~ 388 (816)
+|| .+.++.+++..|.+.+| .++.............. .... +.. ......+.. ......+..
T Consensus 245 ~Pf~~~~~~~~~l~~I~~~~G-~~~~~~~~~~~~~~~~~--~~~~----------p~~---~~~~~~~~~~~~~~~~p~~ 308 (361)
T 4f9c_A 245 YPFYKASDDLTALAQIMTIRG-SRETIQAAKTFGKSILC--SKEV----------PAQ---DLRKLCERLRGMDSSTPKL 308 (361)
T ss_dssp SSSSCCSSHHHHHHHHHHHHC-HHHHHHHHHHTTEEEEE--SSCC----------CCC---CHHHHHHHHC---------
T ss_pred CCCCCCCCHHHHHHHHHHHCC-CCCCHHHHHHCCCCCCC--CCCC----------CCH---HHHHHHHHHCCCCCCCCCC
T ss_conf 998999987999999998408-96200012220222223--3457----------620---2567777640244446432
Q ss_pred CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 753345552578984088777887122345687689999999971203969999999998097778999
Q 003475 389 GKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP 457 (816)
Q Consensus 389 ~~~~f~~~~L~~il~~~p~~~~~~~e~~~~~~~~s~~l~DLI~~mL~~DP~kRpTa~eaL~HPff~~~~ 457 (816)
. ..+... .........++++++|||.+||++||++|+||+|||+||||++.+
T Consensus 309 ~---------~~~~~~--------~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 309 T---------SDIQGH--------ATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360 (361)
T ss_dssp ------------------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred C---------CCCCCC--------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCC
T ss_conf 2---------111123--------344323445999999999987769935790899996692307898
No 10
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=420.96 Aligned_cols=261 Identities=24% Similarity=0.370 Sum_probs=213.0
Q ss_pred CCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCH----HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEE
Q ss_conf 6774699998424785269984136799099999971683----669999999999999620039889864449978986
Q 003475 107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV 182 (816)
Q Consensus 107 ~~~rY~i~~~LG~G~fG~Vyka~d~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkL~~~f~ 182 (816)
..++|+++++||+|+||+||+|+++.+++.||||++++.. .......+|..++..+... +|||||+++++|.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~----~HP~IV~l~~~f~ 262 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG----DCPFIVCMSYAFH 262 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS----CCTTBCCEEEEEE
T ss_pred CHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHC----CCCCEEEEEEEEE
T ss_conf 568928888983164839999999999989999997578825255689999999999999648----9998717999999
Q ss_pred ECEEEEEEEECCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 1402489873276-117999997306999999999999955411012433724613688986211267889608996135
Q 003475 183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG 261 (816)
Q Consensus 183 ~~~~l~LVmE~l~-gsL~dll~~~~~~~lse~~i~~i~~QIL~gL~yLHs~gIVHrDLKPeNILL~~~~~~g~iKL~DFG 261 (816)
+.+.+|||||||. |+|.+++... +.+++..++.++.||+.||.|||+++||||||||+||||+ .++.+||+|||
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld---~~G~vKL~DFG 337 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLG 337 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTSCEEECCCT
T ss_pred ECCEEEEEEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEE---CCCCEEECCCC
T ss_conf 899889999468998299999866--9999999999999999999999978854168866875980---89988964565
Q ss_pred CCCCCC-CCCEEECCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 642358-73100014645568400137-8556531267799999999839999999997999999999938999667788
Q 003475 262 SACTED-RTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK 339 (816)
Q Consensus 262 lA~~~~-~~~~~~~gT~~Y~APEvl~g-~~ys~ksDIWSLGvIL~ELltG~~PF~g~s~~e~l~~I~~~lg~~Pp~~~l~ 339 (816)
+|+... ....+.+||+.|+|||++.. ..|+.++|||||||++|||++|.+||.+.+..+....+..... .+
T Consensus 338 lA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~-~~------ 410 (689)
T 3v5w_A 338 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-MA------ 410 (689)
T ss_dssp TCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH-CC------
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC-CC------
T ss_conf 56663789877765786731889984799999599999999999999868799999986779999985057-98------
Q ss_pred HHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 63101101240387654568853357763011245999998751267687533455525789840887778871223456
Q 003475 340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE 419 (816)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~y~l~~~~e~e~~~~~~~~~~~~~f~~~~L~~il~~~p~~~~~~~e~~~~~ 419 (816)
+.++
T Consensus 411 -----------------------------------------------------------------~~~p----------- 414 (689)
T 3v5w_A 411 -----------------------------------------------------------------VELP----------- 414 (689)
T ss_dssp -----------------------------------------------------------------CCCC-----------
T ss_pred -----------------------------------------------------------------CCCC-----------
T ss_conf -----------------------------------------------------------------8887-----------
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHCCCCCCCCCCC
Q ss_conf 876899999999712039699999-----9999809777899999
Q 003475 420 SQIRLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPFT 459 (816)
Q Consensus 420 ~~~s~~l~DLI~~mL~~DP~kRpT-----a~eaL~HPff~~~~~~ 459 (816)
..+++++.|||.+||+.||++|++ ++|+++||||++..|.
T Consensus 415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~ 459 (689)
T 3v5w_A 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQ 459 (689)
T ss_dssp TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHH
T ss_pred CCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHH
T ss_conf 669999999999976089868799988899999669150478988
Done!