Query 003477
Match_columns 816
No_of_seqs 726 out of 3671
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 00:10:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003477.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003477hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 8E-88 1.7E-92 783.7 42.5 764 16-804 121-947 (975)
2 KOG4412 26S proteasome regulat 99.9 6.1E-24 1.3E-28 205.3 13.2 133 432-572 69-203 (226)
3 KOG4412 26S proteasome regulat 99.9 7.2E-24 1.6E-28 204.9 13.6 116 426-550 97-213 (226)
4 PHA02878 ankyrin repeat protei 99.8 2.1E-20 4.5E-25 216.4 14.9 249 296-573 39-299 (477)
5 PHA02791 ankyrin-like protein; 99.8 1.2E-19 2.6E-24 195.5 19.1 141 422-572 81-225 (284)
6 PHA03095 ankyrin-like protein; 99.8 7.5E-20 1.6E-24 210.7 16.1 252 297-568 50-317 (471)
7 PHA03100 ankyrin repeat protei 99.8 1.4E-19 3.1E-24 209.1 17.6 248 296-569 37-311 (480)
8 PHA02875 ankyrin repeat protei 99.8 2E-19 4.4E-24 204.1 17.0 131 432-570 99-231 (413)
9 PHA02874 ankyrin repeat protei 99.8 2.6E-19 5.7E-24 204.8 17.5 249 299-572 6-286 (434)
10 KOG0509 Ankyrin repeat and DHH 99.8 1.6E-19 3.6E-24 203.6 13.6 139 425-571 68-208 (600)
11 PHA02791 ankyrin-like protein; 99.8 7.3E-19 1.6E-23 189.5 16.4 130 433-572 59-191 (284)
12 PHA02743 Viral ankyrin protein 99.8 5.7E-19 1.2E-23 176.0 13.5 135 433-573 18-160 (166)
13 KOG0509 Ankyrin repeat and DHH 99.8 2.6E-19 5.7E-24 202.0 12.2 134 433-573 110-244 (600)
14 PHA02876 ankyrin repeat protei 99.8 1.5E-18 3.2E-23 209.6 18.4 261 296-574 180-476 (682)
15 PHA02876 ankyrin repeat protei 99.8 2E-18 4.3E-23 208.5 19.3 139 427-572 265-406 (682)
16 PHA02859 ankyrin repeat protei 99.8 2.3E-18 5E-23 178.0 16.2 134 431-572 47-190 (209)
17 PHA02875 ankyrin repeat protei 99.8 2.1E-18 4.6E-23 195.8 17.2 135 429-571 62-198 (413)
18 KOG0508 Ankyrin repeat protein 99.8 8.6E-19 1.9E-23 190.2 13.0 125 429-562 111-236 (615)
19 PHA02946 ankyin-like protein; 99.8 3.8E-18 8.3E-23 195.7 18.1 145 420-565 158-321 (446)
20 PHA02741 hypothetical protein; 99.8 3E-18 6.6E-23 171.2 14.2 128 432-567 18-158 (169)
21 PHA03095 ankyrin-like protein; 99.8 9.4E-18 2E-22 193.4 18.4 253 300-574 20-290 (471)
22 PHA03100 ankyrin repeat protei 99.8 1.8E-17 3.8E-22 191.7 19.4 146 420-573 126-282 (480)
23 PHA02736 Viral ankyrin protein 99.8 3.4E-18 7.4E-23 167.8 11.3 130 433-568 15-153 (154)
24 KOG0510 Ankyrin repeat protein 99.8 4.1E-18 8.9E-23 195.3 12.9 135 432-571 270-407 (929)
25 KOG4177 Ankyrin [Cell wall/mem 99.7 5.6E-18 1.2E-22 205.1 14.4 244 297-567 377-632 (1143)
26 PHA02878 ankyrin repeat protei 99.7 1.5E-17 3.2E-22 192.7 17.1 114 452-571 149-265 (477)
27 PHA02874 ankyrin repeat protei 99.7 3.6E-17 7.8E-22 187.2 19.2 144 420-571 53-220 (434)
28 PHA02989 ankyrin repeat protei 99.7 2.6E-17 5.7E-22 191.4 18.4 152 420-573 93-288 (494)
29 PHA02798 ankyrin-like protein; 99.7 1.9E-17 4.2E-22 192.3 15.8 157 418-575 92-292 (489)
30 PLN03192 Voltage-dependent pot 99.7 3E-17 6.5E-22 201.8 17.3 136 427-572 550-686 (823)
31 PHA02716 CPXV016; CPX019; EVM0 99.7 2.9E-17 6.3E-22 195.6 16.4 147 421-573 198-398 (764)
32 PHA02859 ankyrin repeat protei 99.7 5E-17 1.1E-21 168.1 14.0 131 433-573 19-157 (209)
33 PHA02795 ankyrin-like protein; 99.7 8.9E-17 1.9E-21 180.4 16.7 129 433-569 147-290 (437)
34 PHA02716 CPXV016; CPX019; EVM0 99.7 6.2E-17 1.3E-21 192.8 15.7 134 432-573 174-351 (764)
35 PHA02946 ankyin-like protein; 99.7 7.6E-17 1.7E-21 185.0 15.7 143 420-571 57-205 (446)
36 PHA02884 ankyrin repeat protei 99.7 1.2E-16 2.6E-21 172.7 14.8 122 433-562 30-158 (300)
37 KOG0510 Ankyrin repeat protein 99.7 1.4E-16 3.1E-21 182.7 14.4 250 296-568 90-368 (929)
38 PHA02798 ankyrin-like protein; 99.7 4.3E-16 9.4E-21 181.1 18.8 143 420-570 130-320 (489)
39 KOG0502 Integral membrane anky 99.7 4.7E-17 1E-21 161.9 8.7 132 431-571 156-288 (296)
40 KOG0508 Ankyrin repeat protein 99.7 5.1E-17 1.1E-21 176.6 9.2 132 432-571 81-213 (615)
41 KOG4177 Ankyrin [Cell wall/mem 99.7 6.1E-17 1.3E-21 196.2 10.0 148 423-578 462-610 (1143)
42 PHA02989 ankyrin repeat protei 99.7 5.3E-16 1.1E-20 180.6 15.3 126 432-566 178-314 (494)
43 KOG0512 Fetal globin-inducing 99.7 2.7E-16 5.9E-21 151.5 10.1 126 437-570 65-194 (228)
44 KOG0514 Ankyrin repeat protein 99.6 4.9E-16 1.1E-20 164.6 9.6 128 430-563 297-429 (452)
45 KOG0502 Integral membrane anky 99.6 3.2E-16 6.8E-21 156.1 7.4 130 433-571 127-256 (296)
46 PHA02917 ankyrin-like protein; 99.6 3.6E-15 7.9E-20 178.1 18.0 124 436-568 104-257 (661)
47 PHA02917 ankyrin-like protein; 99.6 1.9E-15 4E-20 180.5 15.2 151 418-573 51-228 (661)
48 KOG0195 Integrin-linked kinase 99.6 6.4E-16 1.4E-20 158.9 9.0 133 427-567 26-159 (448)
49 PF12796 Ank_2: Ankyrin repeat 99.6 2.2E-15 4.9E-20 133.6 10.4 89 473-571 1-89 (89)
50 PHA02730 ankyrin-like protein; 99.6 3.9E-15 8.4E-20 174.6 14.8 138 421-567 365-524 (672)
51 PHA02795 ankyrin-like protein; 99.6 4.2E-15 9.1E-20 167.0 14.4 132 432-573 113-253 (437)
52 KOG0514 Ankyrin repeat protein 99.6 9.3E-16 2E-20 162.5 8.2 135 429-572 262-405 (452)
53 KOG0505 Myosin phosphatase, re 99.6 3.8E-15 8.2E-20 165.4 9.9 146 420-573 58-263 (527)
54 PF12796 Ank_2: Ankyrin repeat 99.6 1E-14 2.2E-19 129.3 10.3 86 439-530 1-87 (89)
55 PHA02741 hypothetical protein; 99.6 9.6E-15 2.1E-19 145.9 10.6 105 462-572 14-130 (169)
56 PHA02743 Viral ankyrin protein 99.5 4.4E-14 9.6E-19 140.8 12.1 100 431-530 53-156 (166)
57 KOG0195 Integrin-linked kinase 99.5 5.3E-15 1.1E-19 152.2 5.2 127 439-573 4-132 (448)
58 cd00204 ANK ankyrin repeats; 99.5 1.7E-13 3.7E-18 126.3 14.6 121 433-561 5-126 (126)
59 PLN03192 Voltage-dependent pot 99.5 6.8E-14 1.5E-18 172.3 14.4 123 419-551 575-699 (823)
60 TIGR00870 trp transient-recept 99.5 2.9E-14 6.2E-19 174.0 10.6 132 432-565 125-281 (743)
61 PHA02730 ankyrin-like protein; 99.5 8.7E-14 1.9E-18 163.3 13.7 134 431-568 37-182 (672)
62 PHA02884 ankyrin repeat protei 99.5 1E-13 2.2E-18 150.0 11.8 107 462-574 25-137 (300)
63 PHA02792 ankyrin-like protein; 99.5 1.2E-13 2.6E-18 160.7 13.0 141 419-567 321-479 (631)
64 KOG0505 Myosin phosphatase, re 99.5 5.6E-14 1.2E-18 156.2 9.8 140 437-578 42-235 (527)
65 COG0666 Arp FOG: Ankyrin repea 99.5 3E-13 6.4E-18 137.5 12.6 125 432-564 70-203 (235)
66 KOG0507 CASK-interacting adapt 99.5 9.5E-14 2.1E-18 158.8 8.5 126 433-566 47-173 (854)
67 KOG0515 p53-interacting protei 99.4 1.5E-13 3.2E-18 151.0 9.0 118 439-563 554-674 (752)
68 KOG4214 Myotrophin and similar 99.4 2.1E-13 4.6E-18 119.0 7.8 106 437-550 4-109 (117)
69 PHA02736 Viral ankyrin protein 99.4 2E-13 4.4E-18 133.9 8.5 98 432-529 52-153 (154)
70 KOG0512 Fetal globin-inducing 99.4 3.2E-13 7E-18 130.5 9.3 124 429-563 91-217 (228)
71 PHA02792 ankyrin-like protein; 99.4 6.4E-13 1.4E-17 154.7 12.5 135 422-563 58-239 (631)
72 cd01175 IPT_COE IPT domain of 99.4 1.5E-13 3.3E-18 116.9 4.8 73 264-343 1-74 (85)
73 TIGR00870 trp transient-recept 99.4 1.1E-12 2.5E-17 160.1 11.5 147 413-566 60-242 (743)
74 KOG0507 CASK-interacting adapt 99.4 1.2E-12 2.5E-17 150.1 10.6 195 296-574 51-254 (854)
75 KOG0520 Uncharacterized conser 99.4 2.6E-12 5.6E-17 152.6 12.9 312 460-798 565-918 (975)
76 KOG1710 MYND Zn-finger and ank 99.4 2.1E-12 4.6E-17 133.4 10.6 124 433-564 10-135 (396)
77 cd00204 ANK ankyrin repeats; 99.3 1.3E-11 2.9E-16 113.6 11.8 100 464-569 2-101 (126)
78 PF13857 Ank_5: Ankyrin repeat 99.3 1.7E-12 3.6E-17 105.7 4.6 55 488-548 1-56 (56)
79 KOG3676 Ca2+-permeable cation 99.3 7.3E-12 1.6E-16 145.5 11.3 122 434-563 183-330 (782)
80 PTZ00322 6-phosphofructo-2-kin 99.3 1.1E-11 2.5E-16 148.9 11.1 105 437-549 84-196 (664)
81 KOG4214 Myotrophin and similar 99.3 9.7E-12 2.1E-16 108.7 7.4 92 471-569 4-95 (117)
82 PF13637 Ank_4: Ankyrin repeat 99.3 8.1E-12 1.8E-16 100.7 6.2 54 469-522 1-54 (54)
83 PTZ00322 6-phosphofructo-2-kin 99.3 1.5E-11 3.3E-16 147.7 11.2 96 471-572 84-186 (664)
84 PF13857 Ank_5: Ankyrin repeat 99.2 9.5E-12 2.1E-16 101.3 4.2 51 459-509 5-56 (56)
85 KOG3676 Ca2+-permeable cation 99.2 3.2E-11 6.8E-16 140.3 9.6 132 433-571 141-305 (782)
86 PF13637 Ank_4: Ankyrin repeat 99.2 4.4E-11 9.6E-16 96.4 6.5 54 502-561 1-54 (54)
87 COG0666 Arp FOG: Ankyrin repea 99.1 4.9E-10 1.1E-14 113.8 13.6 106 459-570 63-176 (235)
88 KOG0515 p53-interacting protei 99.1 2.7E-10 5.8E-15 125.8 7.9 90 473-568 554-643 (752)
89 KOG4369 RTK signaling protein 99.0 2.3E-10 4.9E-15 134.4 4.3 131 432-570 754-886 (2131)
90 KOG1710 MYND Zn-finger and ank 98.9 3.2E-09 6.9E-14 110.2 8.7 100 421-522 31-132 (396)
91 KOG4369 RTK signaling protein 98.9 1.3E-09 2.9E-14 128.2 6.3 139 425-569 780-920 (2131)
92 cd01179 IPT_plexin_repeat2 Sec 98.8 5.4E-09 1.2E-13 92.6 6.0 83 264-352 1-84 (85)
93 PF01833 TIG: IPT/TIG domain; 98.8 2.4E-09 5.2E-14 93.8 3.1 84 264-351 1-85 (85)
94 KOG0818 GTPase-activating prot 98.8 2.5E-08 5.5E-13 109.8 10.8 97 462-564 120-223 (669)
95 KOG0783 Uncharacterized conser 98.7 4.7E-09 1E-13 121.1 3.9 83 462-550 45-128 (1267)
96 cd00102 IPT Immunoglobulin-lik 98.7 2.8E-08 6E-13 88.0 5.7 84 264-352 1-88 (89)
97 KOG0782 Predicted diacylglycer 98.6 7.4E-08 1.6E-12 107.2 8.5 120 438-564 869-990 (1004)
98 KOG0506 Glutaminase (contains 98.6 4.9E-08 1.1E-12 107.2 5.4 93 466-564 503-596 (622)
99 PF13606 Ank_3: Ankyrin repeat 98.5 1.1E-07 2.3E-12 67.3 4.0 30 501-530 1-30 (30)
100 PF03859 CG-1: CG-1 domain; I 98.5 3E-08 6.5E-13 91.0 0.9 24 18-41 95-118 (118)
101 KOG0705 GTPase-activating prot 98.4 4.4E-07 9.5E-12 101.9 7.8 92 437-529 626-721 (749)
102 cd00603 IPT_PCSR IPT domain of 98.4 6E-07 1.3E-11 80.1 6.2 85 264-352 1-89 (90)
103 PF00023 Ank: Ankyrin repeat H 98.4 5.4E-07 1.2E-11 65.0 4.4 30 501-530 1-30 (33)
104 KOG0506 Glutaminase (contains 98.4 4.7E-07 1E-11 99.7 5.8 93 433-526 504-597 (622)
105 KOG0522 Ankyrin repeat protein 98.3 1E-06 2.2E-11 98.9 7.6 87 437-524 22-110 (560)
106 KOG0818 GTPase-activating prot 98.3 2.2E-06 4.7E-11 94.9 8.8 86 437-523 135-221 (669)
107 KOG0522 Ankyrin repeat protein 98.3 1.8E-06 3.8E-11 97.0 8.0 87 471-563 22-110 (560)
108 cd01180 IPT_plexin_repeat1 Fir 98.3 1.7E-06 3.8E-11 78.1 6.5 87 264-352 1-93 (94)
109 KOG0160 Myosin class V heavy c 98.2 5.1E-06 1.1E-10 99.9 11.8 84 612-706 672-758 (862)
110 KOG0705 GTPase-activating prot 98.2 1.9E-06 4.2E-11 96.9 7.5 90 473-568 628-721 (749)
111 PF00023 Ank: Ankyrin repeat H 98.2 1.3E-06 2.7E-11 63.1 4.0 33 468-500 1-33 (33)
112 KOG2384 Major histocompatibili 98.2 3E-06 6.4E-11 84.0 7.7 66 492-563 2-68 (223)
113 PF13606 Ank_3: Ankyrin repeat 98.2 1.1E-06 2.5E-11 62.1 3.5 30 468-497 1-30 (30)
114 smart00429 IPT ig-like, plexin 98.2 1.8E-06 3.9E-11 76.9 5.3 83 264-351 2-89 (90)
115 KOG0160 Myosin class V heavy c 98.2 1.5E-05 3.3E-10 95.9 13.5 77 648-725 674-754 (862)
116 KOG0521 Putative GTPase activa 98.1 2.7E-06 5.9E-11 102.8 6.1 99 459-563 644-744 (785)
117 COG5022 Myosin heavy chain [Cy 98.0 0.00023 4.9E-09 88.6 19.6 145 611-799 743-893 (1463)
118 KOG0783 Uncharacterized conser 97.9 5.4E-06 1.2E-10 96.5 2.3 73 495-573 45-118 (1267)
119 KOG3609 Receptor-activated Ca2 97.8 4.9E-05 1.1E-09 90.1 9.5 128 433-569 23-159 (822)
120 cd01181 IPT_plexin_repeat3 Thi 97.8 3.2E-05 6.9E-10 70.6 5.9 60 264-326 1-61 (99)
121 KOG0164 Myosin class I heavy c 97.7 0.00045 9.6E-09 80.1 13.6 64 667-738 697-760 (1001)
122 KOG0511 Ankyrin repeat protein 97.7 7.7E-05 1.7E-09 80.7 6.9 74 436-512 37-111 (516)
123 cd02849 CGTase_C_term Cgtase ( 97.6 6.3E-05 1.4E-09 66.0 4.8 79 264-351 3-81 (81)
124 KOG2384 Major histocompatibili 97.6 9.9E-05 2.1E-09 73.4 6.2 69 459-527 2-71 (223)
125 KOG0511 Ankyrin repeat protein 97.5 0.00015 3.2E-09 78.6 6.3 88 470-566 37-124 (516)
126 KOG0521 Putative GTPase activa 97.4 0.00021 4.6E-09 86.8 5.9 91 432-524 653-744 (785)
127 KOG0164 Myosin class I heavy c 97.2 0.0019 4.2E-08 75.0 11.5 83 611-708 694-786 (1001)
128 PF00612 IQ: IQ calmodulin-bin 97.2 0.00052 1.1E-08 44.3 3.5 20 690-709 2-21 (21)
129 KOG2505 Ankyrin repeat protein 97.0 0.006 1.3E-07 68.7 12.5 71 482-561 404-480 (591)
130 KOG0782 Predicted diacylglycer 97.0 0.0008 1.7E-08 75.9 5.4 90 432-523 896-988 (1004)
131 COG5022 Myosin heavy chain [Cy 97.0 0.0085 1.8E-07 75.2 14.3 27 768-794 839-865 (1463)
132 cd00604 IPT_CGTD IPT domain (d 97.0 0.001 2.2E-08 58.4 4.6 80 264-352 1-80 (81)
133 KOG3836 HLH transcription fact 96.6 0.00044 9.5E-09 79.7 -0.5 209 265-530 244-457 (605)
134 smart00248 ANK ankyrin repeats 96.4 0.0057 1.2E-07 40.2 4.0 28 502-529 2-29 (30)
135 PF00612 IQ: IQ calmodulin-bin 96.2 0.0061 1.3E-07 39.3 3.4 21 771-791 1-21 (21)
136 PTZ00014 myosin-A; Provisional 96.1 0.01 2.3E-07 73.0 7.5 35 691-725 779-813 (821)
137 smart00015 IQ Short calmodulin 95.9 0.0094 2E-07 40.6 3.2 21 689-709 3-23 (26)
138 KOG3609 Receptor-activated Ca2 95.7 0.016 3.5E-07 69.3 6.2 93 429-530 56-159 (822)
139 KOG2128 Ras GTPase-activating 95.7 0.12 2.5E-06 65.1 13.6 145 617-794 481-645 (1401)
140 PTZ00014 myosin-A; Provisional 95.4 0.037 8.1E-07 68.3 8.0 40 668-707 779-818 (821)
141 smart00248 ANK ankyrin repeats 95.2 0.026 5.6E-07 36.9 3.5 29 468-496 1-29 (30)
142 KOG2128 Ras GTPase-activating 95.1 0.059 1.3E-06 67.6 8.7 90 618-712 540-645 (1401)
143 smart00015 IQ Short calmodulin 94.9 0.027 5.9E-07 38.3 2.9 20 667-686 4-23 (26)
144 KOG2505 Ankyrin repeat protein 94.0 0.065 1.4E-06 60.7 5.0 59 452-510 406-471 (591)
145 KOG3610 Plexins (functional se 93.2 0.12 2.6E-06 64.3 5.7 89 260-353 139-230 (1025)
146 cd01178 IPT_NFAT IPT domain of 89.8 0.6 1.3E-05 42.6 5.1 86 263-352 1-100 (101)
147 cd01176 IPT_RBP-Jkappa IPT dom 86.3 0.59 1.3E-05 41.4 2.6 66 280-352 20-96 (97)
148 cd00602 IPT_TF IPT domain of e 85.3 1.4 3.1E-05 40.4 4.8 81 265-352 2-100 (101)
149 PF06128 Shigella_OspC: Shigel 82.9 3.1 6.7E-05 43.3 6.5 95 469-567 179-280 (284)
150 cd01177 IPT_NFkappaB IPT domai 82.8 3.2 7E-05 38.0 5.9 85 265-352 2-101 (102)
151 KOG0161 Myosin class II heavy 78.6 25 0.00053 47.6 14.1 52 685-737 769-823 (1930)
152 KOG3836 HLH transcription fact 77.6 3.1 6.8E-05 48.9 5.1 46 459-504 419-464 (605)
153 KOG0162 Myosin class I heavy c 75.0 7.8 0.00017 46.4 7.3 43 667-712 697-739 (1106)
154 KOG0161 Myosin class II heavy 74.6 62 0.0014 44.0 16.1 41 668-708 775-818 (1930)
155 PF06128 Shigella_OspC: Shigel 74.0 4.6 9.9E-05 42.1 4.6 91 436-528 180-280 (284)
156 KOG0163 Myosin class VI heavy 73.1 2.3E+02 0.0051 34.7 22.2 48 619-666 779-832 (1259)
157 KOG0942 E3 ubiquitin protein l 71.0 7.9 0.00017 47.5 6.3 28 662-689 25-52 (1001)
158 KOG4427 E3 ubiquitin protein l 68.7 13 0.00028 44.7 7.3 35 662-702 26-60 (1096)
159 KOG3610 Plexins (functional se 67.8 5.1 0.00011 50.5 4.0 78 260-337 46-126 (1025)
160 KOG0942 E3 ubiquitin protein l 65.7 9.5 0.00021 46.9 5.5 34 766-799 24-57 (1001)
161 KOG4427 E3 ubiquitin protein l 62.5 18 0.00039 43.7 6.8 36 643-680 26-61 (1096)
162 PF03158 DUF249: Multigene fam 54.9 56 0.0012 33.3 7.9 45 506-562 147-191 (192)
163 KOG0163 Myosin class VI heavy 54.6 5E+02 0.011 32.1 21.1 24 611-634 811-834 (1259)
164 KOG0377 Protein serine/threoni 51.9 27 0.00057 39.8 5.6 21 666-686 17-37 (631)
165 PF03158 DUF249: Multigene fam 49.5 22 0.00048 36.1 4.2 46 472-523 146-191 (192)
166 PF11929 DUF3447: Domain of un 49.5 25 0.00055 30.2 4.1 45 472-523 9-53 (76)
167 KOG0162 Myosin class I heavy c 47.0 37 0.00081 41.0 6.1 40 757-799 685-724 (1106)
168 KOG0377 Protein serine/threoni 45.4 27 0.00058 39.8 4.5 23 610-632 14-36 (631)
169 PF11929 DUF3447: Domain of un 38.1 41 0.0009 28.8 3.7 46 505-563 9-54 (76)
170 KOG0165 Microtubule-associated 37.8 9E+02 0.019 30.1 17.6 117 668-792 172-296 (1023)
171 KOG4229 Myosin VII, myosin IXB 36.4 34 0.00074 43.7 4.0 84 616-712 922-1012(1062)
172 KOG0165 Microtubule-associated 32.1 4.6E+02 0.01 32.4 11.9 36 690-725 627-662 (1023)
173 PF14545 DBB: Dof, BCAP, and B 31.7 1.1E+02 0.0024 29.9 5.8 67 269-341 3-78 (142)
174 KOG1709 Guanidinoacetate methy 29.8 39 0.00084 35.4 2.4 45 521-571 1-45 (271)
175 PF08763 Ca_chan_IQ: Voltage g 29.0 70 0.0015 23.6 2.9 18 668-685 11-28 (35)
176 COG5261 IQG1 Protein involved 28.1 5.6E+02 0.012 32.2 11.8 11 668-678 351-361 (1054)
177 KOG1419 Voltage-gated K+ chann 22.0 71 0.0015 37.7 2.9 18 646-663 339-356 (654)
178 PRK14537 50S ribosomal protein 21.7 2.1E+02 0.0046 30.0 6.0 11 692-702 62-72 (230)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=8e-88 Score=783.72 Aligned_cols=764 Identities=39% Similarity=0.572 Sum_probs=556.3
Q ss_pred HHHHHHHHhcccCCCcEEEEEeeeccC--CCCCCCCCCCCCCCCCCC-cccccccccccCCCC-----------ccCCCC
Q 003477 16 FLHLVSCLLCFRTLENIVLVHYRETHE--GTPATPPNSHSSSISDQS-APLLLSEEFNSGAGH-----------AYSAGG 81 (816)
Q Consensus 16 ~~~~~~~~~~~~~~~~~v~v~y~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~ 81 (816)
.+|=-||||||+.+|||||||||+|++ ....++....++.++|+. ++..+++...+.+.. ....++
T Consensus 121 tF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~~~~s~~sd~~~S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~~~ 200 (975)
T KOG0520|consen 121 TFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGEIFSSIISDKAWSLNQLAGQLSPIFHNHSSVNEDVAEINSNQTG 200 (975)
T ss_pred hHHHHHHHhhccccCceEEEEEeecccccccccCcccccccccccccccHHHhhcccCcchhcccchHHHHHHHhhhccc
Confidence 357789999999999999999999999 222334444456666665 334444443332220 001111
Q ss_pred ccccCCCCCccccccccccccccccc-cccccccCCCCCCCCCCCCcccc--------------ccccccccccCCCCCC
Q 003477 82 KELQAPNESLTVQNHEMRLHELNTLE-WDDLVVTNDSNDSTEPRGDKFSH--------------FDQQNHTAIKGAASNG 146 (816)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 146 (816)
..+....+ ...+|.+++++.|+.+ |+.+.++.|+.+...+.-.+.+. +....++..+++...|
T Consensus 201 ~~~g~~~~--~s~~h~i~~~~~~s~~~~~~~p~s~~s~~~~~~~~~~~~~~~~~~~~rs~~~s~~te~l~n~~~~~~~~g 278 (975)
T KOG0520|consen 201 NALGSVFG--NSRNHRIRLHEVNSLDPLYKLPVSDDSLNLSAPKPIDLPKGPTSVKQRSSSPSYFTEILGNAPSGLVSQG 278 (975)
T ss_pred cccccccC--cchhhhhcccccCCccccccccccCCccccccCCCcccccCCcchhhcCCCCcchhhhcccCCCcccccc
Confidence 11111111 3469999999999999 99999988865555554433222 1112222222322222
Q ss_pred CC-CCCCCCccccccCCccCCCCCcccCCCCcccCCCccchhhccccccc---cccccccccccccCCc----cc-cccc
Q 003477 147 SF-FPSHDSYAEVSSGGCLTSLSQPIDRSNNTQFNNLDGVYSELMGTQSS---VSSQRNEFGEVCTGDS----LD-ILAG 217 (816)
Q Consensus 147 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~-~~~~ 217 (816)
+. +.++.+ |.+ +.....+....++ -.+++.+.+...+..+. ...|...+........ .+ .+.+
T Consensus 279 ~s~s~~l~~---i~~---~~~~~~~~~~~p~--~~nf~~~ss~~s~~~~~~~g~g~~~~~~sa~~~~~P~~~~~~~~~~~ 350 (975)
T KOG0520|consen 279 NSLSSSLQR---ISS---FTGLDNAAYEQPN--SQNFEPNSSLNSHVTGQSYGQGLQARSPSATSESRPITSAADAALSE 350 (975)
T ss_pred cccccchhh---ccc---ccccccccccCCc--cccccccccCCCCccccccCccccCCCcccccccCCcchhhcccccc
Confidence 21 111111 111 0000000000000 11111122222111111 1122221111111112 44 4668
Q ss_pred CCCCCCCchhhhHHhhhCCCCCC-------CCCCCCCCCCCC--CCCCCCCCCCceeeEeecCCCCCCCCCeEEEEEccC
Q 003477 218 DGLQSQDSFGKWMNYIMTDSPGS-------VDDPVLEPSISS--GHHQFTVPEHLFSITDVSPAWAFSNEKTKILVTGFF 288 (816)
Q Consensus 218 ~~~~~~~sf~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~s~~~~~~~~I~d~sP~w~~~~gg~kVlI~G~f 288 (816)
+||++.|||++|++.++..++.. .-.|+.++..++ ..++| +++|+|+|+||||+|+|++||+||+|+|++
T Consensus 351 ~~l~sgdsf~~~~~t~~e~~d~~q~~s~~~~~~p~~~~~~~~~s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~ 429 (975)
T KOG0520|consen 351 LGLKSGDSFSRWASTFGEISDLGQDPSGEAVWTPENDPMGPPGSFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFP 429 (975)
T ss_pred ccccccccccchhhhhcccccCCCCCccccccccCCCcCCCcccccCCC-CCcceeeeeccCcccccCCCCcEEEEecCc
Confidence 99999999999999866533221 111122222222 45555 449999999999999999999999999973
Q ss_pred CCCcccCCCCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccC-CCCcccccccccCCCCC--cCCCCCcccc
Q 003477 289 HKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLD-GHKPISQVLNFEYRSPQ--LHAPVASSED 365 (816)
Q Consensus 289 ~~~~~~~~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~-~~~~~s~~~~Fey~~~~--l~~~~~~~~d 365 (816)
. +.+..+|.||||+++|||++|++||||||||||.||.|+|||+|+ ++..|+++++|+|.... .+++.. -
T Consensus 430 ~----~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s---~ 502 (975)
T KOG0520|consen 430 Q----DETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQQIDKLS---W 502 (975)
T ss_pred c----ccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcccccccc---c
Confidence 2 345889999999999999999999999999999999999999999 88899999999999732 222222 0
Q ss_pred ccchhHHHHHHHHHHHHhcCcccccccccCCCCCcHHHHHH--HhhhhhccCCcHHH-HHHhhCCCCCCCCccCcHHHHH
Q 003477 366 KSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKK--FASKSTCISNSWAY-LFKSVGDKRTSLPEAKDSFFEL 442 (816)
Q Consensus 366 ~~~~~~~~l~~rla~lL~~~~~~lqil~~~~~~~~l~e~~~--~a~~i~~~~~~~~~-li~~l~~~~~~~~~g~t~L~~A 442 (816)
++...++.++.||..++.. ..+++.++..+....+... ++.+++...+.|.+ ++............-+.-++.-
T Consensus 503 ~d~~~~~sl~~rl~~~~~r---~~~~~~s~~~~~n~~~~~~~~l~skv~~l~~~~~~r~~~~~~~~~~~~~~~r~~lllh 579 (975)
T KOG0520|consen 503 EDFLFQMSLLHRLETMLNR---KQSILSSKPSTENTSDAESGNLASKVVHLLNEWAYRLLKSISENLSSSVNFRDMLLLH 579 (975)
T ss_pred ccchhhhHHHHHHHHHHHH---hHhHhhccCCccccccccchhHHHHHHHHHHHHHHHHHhhHhhhccccCCCcchHHHH
Confidence 1123445555566655531 2345566666666666666 88999999999999 8888766666655555444444
Q ss_pred HHcCCcHHHHHHHHHc--CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHH
Q 003477 443 TLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVD 520 (816)
Q Consensus 443 a~~~~l~~~lv~~Ll~--ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~l 520 (816)
..+..+..||++.+++ |...+..|.+|+..+|++|..|+.+.+.+.+..|..++++|..||||||||+.+|++.++..
T Consensus 580 L~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~ 659 (975)
T KOG0520|consen 580 LLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVAS 659 (975)
T ss_pred HHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHH
Confidence 4455567789999999 66677799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCccccc-cccccccccccccc-ccC--CCc
Q 003477 521 LLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG-NISGSLQTGSTITV-DTQ--NLT 596 (816)
Q Consensus 521 LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~l~~-~is~~~~~~~~~~~-~~~--~~~ 596 (816)
|++.|+++++++||+..+..|.|+.++|..+||.++..+|.+..+..++.++.+.+ ++++.......... ... +-.
T Consensus 660 l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~ 739 (975)
T KOG0520|consen 660 LIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNLELADPNLSADSEEDKAEKTSSEGSPNPD 739 (975)
T ss_pred HHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhccccccccCCCchhhhhhhccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999888 56555444333333 221 122
Q ss_pred chhhhhhhhhhHHhhhHHHHHHHHHHHhhhhHHHHHHH-HhcCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 003477 597 EDEVYLKDTLSAYRTAAEAAARIQAAFREHSLKVQTKA-IRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHR 675 (816)
Q Consensus 597 ~~elslk~sL~a~r~~~~AAi~IQ~~~R~~~~R~r~~~-~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rk~~~aai~IQa~ 675 (816)
.+..++++.+.+|+++++||.+||++||+..++++..+ +..+...+........+.++.+++++..|....++..||.+
T Consensus 740 ~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~~~~i~~~~~~~m~~~~a~~~~~~r~~~~aa~~iq~~ 819 (975)
T KOG0520|consen 740 EDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDATKEQISEELAVSMKASSAFSMCDDRSDPAAASRIQKK 819 (975)
T ss_pred ccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhcchhhhhhhhhhhhcccchhcCccccchhHHHHhhhh
Confidence 34556999999999999999999999999999965543 44444556677778889999999988888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCC---Cc
Q 003477 676 FRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNH---EG 752 (816)
Q Consensus 676 ~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~Rr~r~~r~~~r~lr~~~~~~~~~~~Q~~---~~ 752 (816)
||+|+.|+.|+.+|..+++||+++||++.|+.|+++.|++.++.+.+.+||++++++|+++.++... .|.. ..
T Consensus 820 f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e----~~~~a~t~~ 895 (975)
T KOG0520|consen 820 FRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFE----EQETAATVI 895 (975)
T ss_pred hhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchh----ccccccchH
Confidence 9999999999999999999999999999999999999999999999999999999999999886531 1111 11
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 003477 753 DAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQAKLEY 804 (816)
Q Consensus 753 ~~~~~~l~~~Rkq~e~~~~~Av~~IQs~~R~~~aR~qyrrlk~~~~~~~~~~ 804 (816)
++.+|++|..|++.|+++.+|+++||+|+|.+++|++|||+.....+.+..+
T Consensus 896 e~~yd~yKq~~~~~~~r~~~A~~~VQsm~rs~~a~qqyrR~~~~~~~~~~~~ 947 (975)
T KOG0520|consen 896 EDCYDFYKQLRKQTEERLTRAVVRVQSMFRSPKAQQQYRRLLLVYEQYQESY 947 (975)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhh
Confidence 5999999999999999999999999999999999999999999988888765
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=6.1e-24 Score=205.32 Aligned_cols=133 Identities=23% Similarity=0.234 Sum_probs=124.5
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc--CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHH
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 509 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~--ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~A 509 (816)
.+.|++|||.||..|+.+ +++-|+. |+++|..+..|+|+||+|+.+|..+++.+|+++|+.++.+|..|.||||-|
T Consensus 69 DdaGWtPlhia~s~g~~e--vVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRA 146 (226)
T KOG4412|consen 69 DDAGWTPLHIAASNGNDE--VVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRA 146 (226)
T ss_pred cccCCchhhhhhhcCcHH--HHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHH
Confidence 366999999999999887 6776665 999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCc
Q 003477 510 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 572 (816)
Q Consensus 510 a~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l 572 (816)
|.-|..+++++|+..|+.+|. +|..|+||||.|...||.+++.+|+++||+..+++-
T Consensus 147 AavGklkvie~Li~~~a~~n~------qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edk 203 (226)
T KOG4412|consen 147 AAVGKLKVIEYLISQGAPLNT------QDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDK 203 (226)
T ss_pred HhccchhhHHHHHhcCCCCCc------ccccCccHHHHHHhccCchHHHHHHHhccceeeccc
Confidence 999999999999999999998 999999999999889999999999999999877665
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=7.2e-24 Score=204.86 Aligned_cols=116 Identities=28% Similarity=0.368 Sum_probs=108.6
Q ss_pred CCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCc
Q 003477 426 GDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT 504 (816)
Q Consensus 426 ~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~T 504 (816)
.+.+..+..|.|+||+|+-+|.++ +..+|++ |+.++.+|..|+||||-||..|..+++++|+..|+.+|.+|..|+|
T Consensus 97 advna~tn~G~T~LHyAagK~r~e--IaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~T 174 (226)
T KOG4412|consen 97 ADVNATTNGGQTCLHYAAGKGRLE--IAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFT 174 (226)
T ss_pred CCcceecCCCcceehhhhcCChhh--HHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCcc
Confidence 355666788999999999999999 8888888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 003477 505 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 550 (816)
Q Consensus 505 pLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~ 550 (816)
|||.|..-||.+...+|+++||+++. .|+.| ||+-.|+.
T Consensus 175 pL~~al~e~~~d~a~lLV~~gAd~~~------edke~-t~~~~a~~ 213 (226)
T KOG4412|consen 175 PLHHALAEGHPDVAVLLVRAGADTDR------EDKEG-TALRIACN 213 (226)
T ss_pred HHHHHHhccCchHHHHHHHhccceee------ccccC-chHHHHHH
Confidence 99999888999999999999999998 88888 99888775
No 4
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.83 E-value=2.1e-20 Score=216.40 Aligned_cols=249 Identities=14% Similarity=0.047 Sum_probs=170.7
Q ss_pred CCCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcccccccccCCCCCcCCCCCccccccchhHHHH-
Q 003477 296 SKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQV- 374 (816)
Q Consensus 296 ~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~s~~~~Fey~~~~l~~~~~~~~d~~~~~~~~l- 374 (816)
++.|+||..|+.+++..+++.|+-... ....|..||+++|..+....-........ ......+.++++.
T Consensus 39 tPLh~A~~~g~~e~vk~Ll~~gadvn~--~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~--------~~~~~~~~~~l~~a 108 (477)
T PHA02878 39 IPLHQAVEARNLDVVKSLLTRGHNVNQ--PDHRDLTPLHIICKEPNKLGMKEMIRSIN--------KCSVFYTLVAIKDA 108 (477)
T ss_pred chHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHCccHhHHHHHHHHHh--------ccccccchhhHHHH
Confidence 467999999999999999999853322 12578899999885432110000000000 0000112233322
Q ss_pred ----HHHHHHHHhcCcccccccccCCCCCcHHHHHHHhhhhhcc---CCcHHHHHHhhCCCCCCCCc-cCcHHHHHHHcC
Q 003477 375 ----QMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCI---SNSWAYLFKSVGDKRTSLPE-AKDSFFELTLKS 446 (816)
Q Consensus 375 ----~~rla~lL~~~~~~lqil~~~~~~~~l~e~~~~a~~i~~~---~~~~~~li~~l~~~~~~~~~-g~t~L~~Aa~~~ 446 (816)
...++++|......- ..... . .......... .+-...++..+.+.+..... |.||||.|+..|
T Consensus 109 ~~~~~~ei~~~Ll~~~~~~-----~~~~~-~---~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~ 179 (477)
T PHA02878 109 FNNRNVEIFKIILTNRYKN-----IQTID-L---VYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENK 179 (477)
T ss_pred HHcCCHHHHHHHHhCcccC-----cccCc-H---HHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCC
Confidence 123344443221100 00000 0 0000000000 01123344444555555566 999999999999
Q ss_pred CcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHc-CCHHHHHHHHhc
Q 003477 447 KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY-GREKMVVDLLSA 524 (816)
Q Consensus 447 ~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~-G~~eiV~lLL~~ 524 (816)
+.+ ++++|++ |++++..|..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+.. ++.+++++|+++
T Consensus 180 ~~~--iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~ 257 (477)
T PHA02878 180 DQR--LTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEH 257 (477)
T ss_pred CHH--HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHc
Confidence 988 7888888 999999999999999999999999999999999999999999999999999975 789999999999
Q ss_pred CCCCCCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcc
Q 003477 525 GAKPNLVTDPTSQNP-GGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 525 GAd~n~~td~~~~d~-~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
|++++. ++. .|.||||+| .++.+++++|+++|++.+..+..
T Consensus 258 gadvn~------~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~ 299 (477)
T PHA02878 258 GVDVNA------KSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSY 299 (477)
T ss_pred CCCCCc------cCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCC
Confidence 999998 554 799999999 57889999999999998776553
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.83 E-value=1.2e-19 Score=195.50 Aligned_cols=141 Identities=13% Similarity=0.018 Sum_probs=123.0
Q ss_pred HHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCC-chHHHHHHcCChhhHHHHHhCCCCCcccc
Q 003477 422 FKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQ-GVIHLCAMLGYTWAILLFSWSGLSLDFRD 499 (816)
Q Consensus 422 i~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~-TpLHlAa~~G~~~iv~~LL~~Gadin~~D 499 (816)
+....+.+.....|.||||.|+..|+.+ ++++|++ |++++..+..|+ ||||+|+..|+.+++++|+++|.+. .|
T Consensus 81 L~~Gadvn~~d~~G~TpLh~Aa~~g~~e--ivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d 156 (284)
T PHA02791 81 LFSGMDDSQFDDKGNTALYYAVDSGNMQ--TVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FD 156 (284)
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCCHH--HHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cc
Confidence 3333444555677999999999999988 7888888 999999998885 8999999999999999999987654 23
Q ss_pred -CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCH-HHHHHHcCCHHHHHHHHhhhhhccccCc
Q 003477 500 -KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA-ADIASKKGFDGLAAFLSEQALVAQFNDM 572 (816)
Q Consensus 500 -~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~Tp-L~lA~~~G~~~iv~lLle~Ga~~~l~~l 572 (816)
..|.||||+|+..|+.+++++||++||+++. +|..|.|| ||+|+..|+.+++++|+++|++.+.++.
T Consensus 157 ~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~------~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~ 225 (284)
T PHA02791 157 LAILLSCIHITIKNGHVDMMILLLDYMTSTNT------NNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL 225 (284)
T ss_pred cccCccHHHHHHHcCCHHHHHHHHHCCCCCCc------ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence 2589999999999999999999999999998 88889987 9999999999999999999999988776
No 6
>PHA03095 ankyrin-like protein; Provisional
Probab=99.82 E-value=7.5e-20 Score=210.75 Aligned_cols=252 Identities=16% Similarity=0.171 Sum_probs=175.1
Q ss_pred CCcEEEEcC---CcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcccccccccCCCCCcCCCCCccccccchhHHH
Q 003477 297 KSNMFCVCG---EVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQ 373 (816)
Q Consensus 297 ~~~~~c~FG---~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~s~~~~Fey~~~~l~~~~~~~~d~~~~~~~~ 373 (816)
+.+++|.+| ..++...+++.|.-.-... ..|..|++.++..+.. .+++.+-.. ........+..|.++++
T Consensus 50 ~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~--~~g~TpLh~A~~~~~~-~~iv~lLl~----~ga~in~~~~~g~tpLh 122 (471)
T PHA03095 50 PLHLYLHYSSEKVKDIVRLLLEAGADVNAPE--RCGFTPLHLYLYNATT-LDVIKLLIK----AGADVNAKDKVGRTPLH 122 (471)
T ss_pred HHHHHHHhcCCChHHHHHHHHHCCCCCCCCC--CCCCCHHHHHHHcCCc-HHHHHHHHH----cCCCCCCCCCCCCCHHH
Confidence 668888888 7889988999886543332 3677787777754420 111111000 00112223556789988
Q ss_pred HHH-------HHHHHHhcCcccccccccCCCCCcHHHHHHHhhhhhccC---CcHHHHHHhhCCCCCCCCccCcHHHHHH
Q 003477 374 VQM-------RLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCIS---NSWAYLFKSVGDKRTSLPEAKDSFFELT 443 (816)
Q Consensus 374 l~~-------rla~lL~~~~~~lqil~~~~~~~~l~e~~~~a~~i~~~~---~~~~~li~~l~~~~~~~~~g~t~L~~Aa 443 (816)
... .++++|...+.++...+..- ...+ ...+.... +-...++....+.......|.|+||.++
T Consensus 123 ~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g-~tpL------~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~ 195 (471)
T PHA03095 123 VYLSGFNINPKVIRLLLRKGADVNALDLYG-MTPL------AVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHL 195 (471)
T ss_pred HHhhCCcCCHHHHHHHHHcCCCCCccCCCC-CCHH------HHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 765 35666655444332211100 0000 00011111 1123333334444444667999999998
Q ss_pred HcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCCh--hhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHH
Q 003477 444 LKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYT--WAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVD 520 (816)
Q Consensus 444 ~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~--~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~l 520 (816)
.......-+++.|++ |++++..|..|.||||+||..|+. .++..|+..|+++|.+|..|+||||+|+..|+.+++++
T Consensus 196 ~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~ 275 (471)
T PHA03095 196 QSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRR 275 (471)
T ss_pred HHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 764332226777777 999999999999999999999975 57889999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhcc
Q 003477 521 LLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 568 (816)
Q Consensus 521 LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 568 (816)
||++||+++. +|..|.||||+|+.+|+.+++++|++.+++.+
T Consensus 276 LL~~gad~n~------~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~ 317 (471)
T PHA03095 276 LIALGADINA------VSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE 317 (471)
T ss_pred HHHcCCCCcc------cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence 9999999998 88999999999999999999999999987764
No 7
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.82 E-value=1.4e-19 Score=209.08 Aligned_cols=248 Identities=16% Similarity=0.151 Sum_probs=167.2
Q ss_pred CCCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeee-----ccCCCCcccccccccCCCCCcCC-CCCccccccch
Q 003477 296 SKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYM-----SLDGHKPISQVLNFEYRSPQLHA-PVASSEDKSKW 369 (816)
Q Consensus 296 ~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v-----~~~~~~~~s~~~~Fey~~~~l~~-~~~~~~d~~~~ 369 (816)
++.++||..|+.+++..+++.|+-... ....|..|++. +..++.. +.+.+ ++.. ...+..+..|+
T Consensus 37 t~L~~A~~~~~~~ivk~Ll~~g~~~~~--~~~~~~t~L~~~~~~~a~~~~~~--~iv~~-----Ll~~ga~i~~~d~~g~ 107 (480)
T PHA03100 37 LPLYLAKEARNIDVVKILLDNGADINS--STKNNSTPLHYLSNIKYNLTDVK--EIVKL-----LLEYGANVNAPDNNGI 107 (480)
T ss_pred hhhhhhhccCCHHHHHHHHHcCCCCCC--ccccCcCHHHHHHHHHHHhhchH--HHHHH-----HHHCCCCCCCCCCCCC
Confidence 477999999999999999998863221 12445566666 4432210 11100 0000 11122355678
Q ss_pred hHHHHHH-------HHHHHHhcCcccccccccCCCCCcHHHHHHHhhhhhccCC-----cHHHHHHhhCCCCCCCCccCc
Q 003477 370 EEFQVQM-------RLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISN-----SWAYLFKSVGDKRTSLPEAKD 437 (816)
Q Consensus 370 ~~~~l~~-------rla~lL~~~~~~lqil~~~~~~~~l~e~~~~a~~i~~~~~-----~~~~li~~l~~~~~~~~~g~t 437 (816)
++++... .++++|...+..+..... .+. .........+ ....++....+.+.....|.|
T Consensus 108 tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~--~g~-------t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~t 178 (480)
T PHA03100 108 TPLLYAISKKSNSYSIVEYLLDNGANVNIKNS--DGE-------NLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYT 178 (480)
T ss_pred chhhHHHhcccChHHHHHHHHHcCCCCCccCC--CCC-------cHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCC
Confidence 8888776 244555444433221111 010 1111111111 122333333444444557889
Q ss_pred HHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCC------CchHHHHHHcCC--hhhHHHHHhCCCCCccccCCCCcHHHH
Q 003477 438 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG------QGVIHLCAMLGY--TWAILLFSWSGLSLDFRDKYGWTALHW 508 (816)
Q Consensus 438 ~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G------~TpLHlAa~~G~--~~iv~~LL~~Gadin~~D~~G~TpLh~ 508 (816)
|||.|+..|+.. +++.|++ |++++..+..| .||||+|+..|+ .+++++|+++|+++|.+|..|+||||+
T Consensus 179 pL~~A~~~~~~~--iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~ 256 (480)
T PHA03100 179 PLHIAVEKGNID--VIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHY 256 (480)
T ss_pred HHHHHHHhCCHH--HHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 999999888877 7788877 88888888888 889999999888 889999999999999999899999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccc
Q 003477 509 AAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 569 (816)
Q Consensus 509 Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l 569 (816)
|+..|+.+++++|+++|++++. +|..|.||+++|+..++.+++++|+++|++.+.
T Consensus 257 A~~~~~~~iv~~Ll~~gad~n~------~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~ 311 (480)
T PHA03100 257 AVYNNNPEFVKYLLDLGANPNL------VNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 311 (480)
T ss_pred HHHcCCHHHHHHHHHcCCCCCc------cCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHH
Confidence 9999999999999999998888 788899999999999999999999998886543
No 8
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.81 E-value=2e-19 Score=204.10 Aligned_cols=131 Identities=19% Similarity=0.201 Sum_probs=122.4
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHH
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 510 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa 510 (816)
...|.||||.|+..++.+ +++.|++ |++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 99 ~~~g~tpL~~A~~~~~~~--iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~ 176 (413)
T PHA02875 99 YKDGMTPLHLATILKKLD--IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAM 176 (413)
T ss_pred cCCCCCHHHHHHHhCCHH--HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence 456899999999999988 8888888 9999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCC-CCHHHHHHHcCCHHHHHHHHhhhhhcccc
Q 003477 511 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKKGFDGLAAFLSEQALVAQFN 570 (816)
Q Consensus 511 ~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G-~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 570 (816)
..|+.+++++|+++|++++. .+..| .||+|+|+..|+.+++++|+++|++.+..
T Consensus 177 ~~g~~eiv~~Ll~~ga~~n~------~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 177 AKGDIAICKMLLDSGANIDY------FGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred HcCCHHHHHHHHhCCCCCCc------CCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence 99999999999999999998 66666 58999999999999999999999998654
No 9
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.81 E-value=2.6e-19 Score=204.80 Aligned_cols=249 Identities=14% Similarity=0.085 Sum_probs=164.9
Q ss_pred cEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcccccccccCCCCCcCCCCCccccccchhHHHHHH--
Q 003477 299 NMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQVQM-- 376 (816)
Q Consensus 299 ~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~s~~~~Fey~~~~l~~~~~~~~d~~~~~~~~l~~-- 376 (816)
..+|.-|++++...++..+--.-.. ....|..||+.++..+.. +++.+-... ....+..+..++++++...
T Consensus 6 ~~ai~~gd~~~v~~ll~~~~~~~n~-~~~~~~tpL~~A~~~g~~--~iv~~Ll~~----Ga~~n~~~~~~~t~L~~A~~~ 78 (434)
T PHA02874 6 RMCIYSGDIEAIEKIIKNKGNCINI-SVDETTTPLIDAIRSGDA--KIVELFIKH----GADINHINTKIPHPLLTAIKI 78 (434)
T ss_pred HHHHhcCCHHHHHHHHHcCCCCCCC-cCCCCCCHHHHHHHcCCH--HHHHHHHHC----CCCCCCCCCCCCCHHHHHHHc
Confidence 4567889999999988744211101 124566666666643321 111110000 0111122445678887743
Q ss_pred ---HHHHHHhcCcccccccccCCCCCcHHHHHHHhhhhhccCCcHHHHHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHH
Q 003477 377 ---RLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLL 453 (816)
Q Consensus 377 ---rla~lL~~~~~~lqil~~~~~~~~l~e~~~~a~~i~~~~~~~~~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv 453 (816)
.++++|...+....++... . ...+....++....+.+.....|.||||.|+..|+.+ ++
T Consensus 79 ~~~~iv~~Ll~~g~~~~~~~~~---~-------------~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~--~v 140 (434)
T PHA02874 79 GAHDIIKLLIDNGVDTSILPIP---C-------------IEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLE--SI 140 (434)
T ss_pred CCHHHHHHHHHCCCCCCcchhc---c-------------CCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHH--HH
Confidence 4556664433322111000 0 0012233444444555666678999999999999987 77
Q ss_pred HHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 003477 454 ERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVT 532 (816)
Q Consensus 454 ~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~t 532 (816)
+.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++.|++++..+
T Consensus 141 ~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~ 220 (434)
T PHA02874 141 KMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKC 220 (434)
T ss_pred HHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCC
Confidence 88887 99999999999999999999999999999999999999999999999999999999999999999998876531
Q ss_pred -------------------------CCCCCCCCCCCHHHHHHHcC-CHHHHHHHHhhhhhccccCc
Q 003477 533 -------------------------DPTSQNPGGLNAADIASKKG-FDGLAAFLSEQALVAQFNDM 572 (816)
Q Consensus 533 -------------------------d~~~~d~~G~TpL~lA~~~G-~~~iv~lLle~Ga~~~l~~l 572 (816)
+++.+|..|.||||+|+..+ +.+++++|+++|++.+..+.
T Consensus 221 ~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~ 286 (434)
T PHA02874 221 KNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDN 286 (434)
T ss_pred CCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCC
Confidence 23446666777777777654 56777777777776655543
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.80 E-value=1.6e-19 Score=203.59 Aligned_cols=139 Identities=24% Similarity=0.280 Sum_probs=126.8
Q ss_pred hCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccC-cCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCC
Q 003477 425 VGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYG 502 (816)
Q Consensus 425 l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d-~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G 502 (816)
+.+.+....+|.+.||+||+++++. ++++|++ |+++|..+ .-|.|||||||..|+..+|.+|+++|||++.+|..|
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~--v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G 145 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLD--VARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQG 145 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHH--HHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCC
Confidence 4444555668999999999999999 8999998 99999987 678999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccC
Q 003477 503 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 503 ~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 571 (816)
.||||.||..|+.-+|.+||.+|+++|. +|.+|+||||+|+.+|+...+..|++.|+.....+
T Consensus 146 ~~~lHla~~~~~~~~vayll~~~~d~d~------~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d 208 (600)
T KOG0509|consen 146 LTPLHLAAQFGHTALVAYLLSKGADIDL------RDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD 208 (600)
T ss_pred CcHHHHHHHhCchHHHHHHHHhcccCCC------cCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence 9999999999999999999999999998 99999999999999999998999999988766655
No 11
>PHA02791 ankyrin-like protein; Provisional
Probab=99.80 E-value=7.3e-19 Score=189.51 Aligned_cols=130 Identities=18% Similarity=0.215 Sum_probs=118.0
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCC-cHHHHHH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGW-TALHWAA 510 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~-TpLh~Aa 510 (816)
.++.||||.|+..|+.. +++.|+. |++++..|..|.||||+|+..|+.+++++|+.+|+++|.++..|+ ||||+|+
T Consensus 59 ~d~~TpLh~Aa~~g~~e--iV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa 136 (284)
T PHA02791 59 LENEFPLHQAATLEDTK--IVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAV 136 (284)
T ss_pred CCCCCHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHH
Confidence 35789999999999987 7888887 999999999999999999999999999999999999999999986 8999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCc
Q 003477 511 YYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 572 (816)
Q Consensus 511 ~~G~~eiV~lLL~~GAd~n~~td~~~~d-~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l 572 (816)
..|+.++|++|+++|++. .| ..|.||||+|+.+|+.+++++|+++|++++..+.
T Consensus 137 ~~g~~eivk~LL~~~~~~--------~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~ 191 (284)
T PHA02791 137 MLNDVSIVSYFLSEIPST--------FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNS 191 (284)
T ss_pred HcCCHHHHHHHHhcCCcc--------cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence 999999999999987653 22 3589999999999999999999999999876654
No 12
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.79 E-value=5.7e-19 Score=176.01 Aligned_cols=135 Identities=21% Similarity=0.179 Sum_probs=119.1
Q ss_pred CccCcHHHHHHHcCCcHH--HHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhh---HHHHHhCCCCCcccc-CCCCcH
Q 003477 433 PEAKDSFFELTLKSKLKE--WLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWA---ILLFSWSGLSLDFRD-KYGWTA 505 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~--~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~i---v~~LL~~Gadin~~D-~~G~Tp 505 (816)
.++.++||.||..|++.. .+++.|.+ |++++..|..|+||||+|+..|+.+. +++|+..|+++|.+| ..|+||
T Consensus 18 ~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~Tp 97 (166)
T PHA02743 18 EDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTL 97 (166)
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcH
Confidence 457789999999999853 13445555 88999999999999999999998664 789999999999998 489999
Q ss_pred HHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcc
Q 003477 506 LHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 506 Lh~Aa~~G~~eiV~lLL~-~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
||+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+..
T Consensus 98 Lh~A~~~g~~~iv~~Ll~~~gad~~~------~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~ 160 (166)
T PHA02743 98 LHIAASTKNYELAEWLCRQLGVNLGA------INYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSI 160 (166)
T ss_pred HHHHHHhCCHHHHHHHHhccCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccC
Confidence 999999999999999995 8999998 8999999999999999999999999999988665543
No 13
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.79 E-value=2.6e-19 Score=201.98 Aligned_cols=134 Identities=24% Similarity=0.280 Sum_probs=123.3
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 511 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~ 511 (816)
.-+.||||+||.+|++. ++.+|++ |++++.+|.+|.||||+||..|+..+|-+||.+|+++|.+|.+|+|||||||.
T Consensus 110 ~l~stPLHWAar~G~~~--vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAay 187 (600)
T KOG0509|consen 110 VLGSTPLHWAARNGHIS--VVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAY 187 (600)
T ss_pred CCCCCcchHHHHcCcHH--HHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHH
Confidence 34779999999999999 7888888 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcc
Q 003477 512 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 512 ~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
.|+...+..||..|+.++.. .|..|.||||+|+..|+..++.+|++.|++....+.+
T Consensus 188 kg~~~~v~~LL~f~a~~~~~-----d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~ 244 (600)
T KOG0509|consen 188 KGFALFVRRLLKFGASLLLT-----DDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTN 244 (600)
T ss_pred hcccHHHHHHHHhccccccc-----ccccCCchHHHHHhcCCcceEehhhhcCCcccccccC
Confidence 99999899999999999982 2389999999999999999999777777877666665
No 14
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.79 E-value=1.5e-18 Score=209.61 Aligned_cols=261 Identities=15% Similarity=0.074 Sum_probs=180.2
Q ss_pred CCCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcc--cccc----cccCCCC---------------
Q 003477 296 SKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI--SQVL----NFEYRSP--------------- 354 (816)
Q Consensus 296 ~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~--s~~~----~Fey~~~--------------- 354 (816)
++.++||..|+.+++..+++.|+-.-.. ...|..+++.+...+..- .... .+...+.
T Consensus 180 TpLh~Aa~~G~~~iv~~LL~~Gad~n~~--~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~ 257 (682)
T PHA02876 180 TPIHYAAERGNAKMVNLLLSYGADVNII--ALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSL 257 (682)
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCcCcc--CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHH
Confidence 4779999999999999999988532211 134566666665433110 0000 0000000
Q ss_pred CcCC--CCCccccccchhHHHHHHH------HHHHHhcCcccccccccCCCCCcHHHHHHHhhhhhcc----CCcHHHHH
Q 003477 355 QLHA--PVASSEDKSKWEEFQVQMR------LAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCI----SNSWAYLF 422 (816)
Q Consensus 355 ~l~~--~~~~~~d~~~~~~~~l~~r------la~lL~~~~~~lqil~~~~~~~~l~e~~~~a~~i~~~----~~~~~~li 422 (816)
.+.. ......+..|++++++... +.++|...+..+...... +. ........ ......++
T Consensus 258 ~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~--g~-------TpLh~Aa~~g~~~~~v~~Ll 328 (682)
T PHA02876 258 LLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIK--GE-------TPLYLMAKNGYDTENIRTLI 328 (682)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCC--CC-------CHHHHHHHhCCCHHHHHHHH
Confidence 0000 1122235578899988653 555555444433221111 11 11111111 12233444
Q ss_pred HhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCC
Q 003477 423 KSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKY 501 (816)
Q Consensus 423 ~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~ 501 (816)
....+.+.....|.||||.|+..++..+ ++..|++ |+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 329 ~~gadin~~d~~g~TpLh~A~~~~~~~~-iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~ 407 (682)
T PHA02876 329 MLGADVNAADRLYITPLHQASTLDRNKD-IVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQK 407 (682)
T ss_pred HcCCCCCCcccCCCcHHHHHHHhCCcHH-HHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCC
Confidence 5556666667789999999998776555 6666666 9999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCC-HHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHhhhhhccccCccc
Q 003477 502 GWTALHWAAYYGR-EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQALVAQFNDMTL 574 (816)
Q Consensus 502 G~TpLh~Aa~~G~-~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G-~~~iv~lLle~Ga~~~l~~l~l 574 (816)
|.||||+|+..++ ..++++|++.|+++|. +|..|.||||+|+..| +.+++++|+++|++.+..+..-
T Consensus 408 g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~------~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g 476 (682)
T PHA02876 408 IGTALHFALCGTNPYMSVKTLIDRGANVNS------KNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQN 476 (682)
T ss_pred CCchHHHHHHcCCHHHHHHHHHhCCCCCCc------CCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCC
Confidence 9999999998766 5678999999999998 8999999999999876 6899999999999988776543
No 15
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.79 E-value=2e-18 Score=208.51 Aligned_cols=139 Identities=18% Similarity=0.184 Sum_probs=122.6
Q ss_pred CCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCC-hhhHHHHHhCCCCCccccCCCCc
Q 003477 427 DKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-TWAILLFSWSGLSLDFRDKYGWT 504 (816)
Q Consensus 427 ~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~-~~iv~~LL~~Gadin~~D~~G~T 504 (816)
+.+.....|.||||.|+..++..+ ++++|++ |++++..|..|.||||+|+..|+ .+++++|+..|+++|..|..|+|
T Consensus 265 ~vn~~d~~g~TpLh~Aa~~~~~~~-iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~T 343 (682)
T PHA02876 265 SVNSIDDCKNTPLHHASQAPSLSR-LVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYIT 343 (682)
T ss_pred CCCCCCCCCCCHHHHHHhCCCHHH-HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCc
Confidence 334445679999999999998765 6677777 99999999999999999999994 88999999999999999999999
Q ss_pred HHHHHHHc-CCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCc
Q 003477 505 ALHWAAYY-GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 572 (816)
Q Consensus 505 pLh~Aa~~-G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l 572 (816)
|||+|+.. ++.+++.+|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+-
T Consensus 344 pLh~A~~~~~~~~iv~lLl~~gadin~------~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~ 406 (682)
T PHA02876 344 PLHQASTLDRNKDIVITLLELGANVNA------RDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQ 406 (682)
T ss_pred HHHHHHHhCCcHHHHHHHHHcCCCCcc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCC
Confidence 99999986 478899999999999998 889999999999999999999999999998765543
No 16
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.78 E-value=2.3e-18 Score=178.05 Aligned_cols=134 Identities=14% Similarity=0.065 Sum_probs=117.9
Q ss_pred CCCccCcHHHHHHHcC--CcHHHHHHHHHc-CCCCCccC-cCCCchHHHHHHc---CChhhHHHHHhCCCCCccccCCCC
Q 003477 431 SLPEAKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGW 503 (816)
Q Consensus 431 ~~~~g~t~L~~Aa~~~--~l~~~lv~~Ll~-ga~in~~d-~~G~TpLHlAa~~---G~~~iv~~LL~~Gadin~~D~~G~ 503 (816)
....|.||||.|+..+ +.+ ++++|++ |+++|.++ ..|.||||+|+.. ++.+++++|+++|+++|.+|..|.
T Consensus 47 ~~~~g~TpLh~a~~~~~~~~e--iv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~ 124 (209)
T PHA02859 47 CNDLYETPIFSCLEKDKVNVE--ILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGK 124 (209)
T ss_pred cCccCCCHHHHHHHcCCCCHH--HHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCC
Confidence 3467999999998865 455 7888888 99999987 5899999998764 478999999999999999999999
Q ss_pred cHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHH-HHHcCCHHHHHHHHhhhhhccccCc
Q 003477 504 TALHWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADI-ASKKGFDGLAAFLSEQALVAQFNDM 572 (816)
Q Consensus 504 TpLh~Aa~--~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~l-A~~~G~~~iv~lLle~Ga~~~l~~l 572 (816)
||||+|+. .++.+++++|+++|++++. +|..|.||||. |+..++.+++++|+++|++.+..+.
T Consensus 125 TpLh~a~~~~~~~~~iv~~Li~~gadin~------~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~ 190 (209)
T PHA02859 125 NLLHMYMCNFNVRINVIKLLIDSGVSFLN------KDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNK 190 (209)
T ss_pred CHHHHHHHhccCCHHHHHHHHHcCCCccc------ccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Confidence 99999976 4789999999999999998 89999999996 5678899999999999998876554
No 17
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.78 E-value=2.1e-18 Score=195.76 Aligned_cols=135 Identities=18% Similarity=0.231 Sum_probs=123.0
Q ss_pred CCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCC-ccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHH
Q 003477 429 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTT-EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTAL 506 (816)
Q Consensus 429 ~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in-~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpL 506 (816)
+.....+.+|||.|+..|+.. +++.|++ |++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 62 ~~~~~~~~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpL 139 (413)
T PHA02875 62 DVKYPDIESELHDAVEEGDVK--AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPL 139 (413)
T ss_pred cccCCCcccHHHHHHHCCCHH--HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHH
Confidence 334456889999999999988 6777777 77664 4677899999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccC
Q 003477 507 HWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 507 h~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 571 (816)
|+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+..+
T Consensus 140 h~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~ 198 (413)
T PHA02875 140 HLAVMMGDIKGIELLIDHKACLDI------EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFG 198 (413)
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCC
Confidence 999999999999999999999998 89999999999999999999999999999987654
No 18
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.78 E-value=8.6e-19 Score=190.20 Aligned_cols=125 Identities=20% Similarity=0.238 Sum_probs=117.8
Q ss_pred CCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHH
Q 003477 429 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 507 (816)
Q Consensus 429 ~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh 507 (816)
+-++....|||..||..|+++ ++++|++ |+|++..|..|.|.||+||..|+.+++++|++.|+|+|.++..|.|+||
T Consensus 111 N~tT~TNStPLraACfDG~le--ivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH 188 (615)
T KOG0508|consen 111 NDTTRTNSTPLRAACFDGHLE--IVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALH 188 (615)
T ss_pred ccccccCCccHHHHHhcchhH--HHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHH
Confidence 444455669999999999999 8999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q 003477 508 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 562 (816)
Q Consensus 508 ~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle 562 (816)
.|+..|+.+++++|+.+|+.++ +|..|.|||..|+..|+.+++++|+.
T Consensus 189 ~caEsG~vdivq~Ll~~ga~i~-------~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 189 DCAESGSVDIVQLLLKHGAKID-------VDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred hhhhcccHHHHHHHHhCCceee-------ecCCCCchHHHHhhhcchHHHHHHhc
Confidence 9999999999999999999988 57889999999999999999999996
No 19
>PHA02946 ankyin-like protein; Provisional
Probab=99.78 E-value=3.8e-18 Score=195.65 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=115.1
Q ss_pred HHHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcC--ChhhHHHHHhCCCCCc
Q 003477 420 YLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGLSLD 496 (816)
Q Consensus 420 ~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G--~~~iv~~LL~~Gadin 496 (816)
.++....+.+.....|.||||.|+..++...-+++.|++ |++++..|..|.||||+|+..| +.+++++|+. |+++|
T Consensus 158 ~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin 236 (446)
T PHA02946 158 KIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVN 236 (446)
T ss_pred HHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCC
Confidence 334444555666778999999998876643226777777 9999999999999999999886 6789998885 89999
Q ss_pred cccCCCCcHHHHHHHcCC-HHHHHHHHhcCCCCCCCC-------C-------CCCC-CCCCCCHHHHHHHcCCHHHHHHH
Q 003477 497 FRDKYGWTALHWAAYYGR-EKMVVDLLSAGAKPNLVT-------D-------PTSQ-NPGGLNAADIASKKGFDGLAAFL 560 (816)
Q Consensus 497 ~~D~~G~TpLh~Aa~~G~-~eiV~lLL~~GAd~n~~t-------d-------~~~~-d~~G~TpL~lA~~~G~~~iv~lL 560 (816)
.+|..|.||||+|+..++ .+++++|+++|++++..+ + ...+ +..|.||||+|+.+|+.+++++|
T Consensus 237 ~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~L 316 (446)
T PHA02946 237 KQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYL 316 (446)
T ss_pred CCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999988 589999999987653211 0 0001 23578999999999999999999
Q ss_pred Hhhhh
Q 003477 561 SEQAL 565 (816)
Q Consensus 561 le~Ga 565 (816)
+++|+
T Consensus 317 l~~~~ 321 (446)
T PHA02946 317 LDNDI 321 (446)
T ss_pred HHCCC
Confidence 99875
No 20
>PHA02741 hypothetical protein; Provisional
Probab=99.77 E-value=3e-18 Score=171.15 Aligned_cols=128 Identities=20% Similarity=0.139 Sum_probs=116.2
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHH------c-CCCCCccCcCCCchHHHHHHcCC----hhhHHHHHhCCCCCccccC
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVV------E-GSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGLSLDFRDK 500 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll------~-ga~in~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Gadin~~D~ 500 (816)
...|.|+||.|+..|+.. +++.|+ . |++++.+|..|.||||+|+..|+ .+++++|+..|+++|.+|.
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~--~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~ 95 (169)
T PHA02741 18 NSEGENFFHEAARCGCFD--IIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEM 95 (169)
T ss_pred ccCCCCHHHHHHHcCCHH--HHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCc
Confidence 356999999999999987 666552 2 68899999999999999999998 5889999999999999985
Q ss_pred -CCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhc
Q 003477 501 -YGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 567 (816)
Q Consensus 501 -~G~TpLh~Aa~~G~~eiV~lLL~-~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 567 (816)
.|+||||+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|++.++..
T Consensus 96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~------~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 96 LEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF------CNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc------CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 89999999999999999999997 5999998 8899999999999999999999999998764
No 21
>PHA03095 ankyrin-like protein; Provisional
Probab=99.76 E-value=9.4e-18 Score=193.35 Aligned_cols=253 Identities=15% Similarity=0.064 Sum_probs=179.7
Q ss_pred EEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCC-CcccccccccCCCCCcCC-CCCccccccchhHHHHHH-
Q 003477 300 MFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGH-KPISQVLNFEYRSPQLHA-PVASSEDKSKWEEFQVQM- 376 (816)
Q Consensus 300 ~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~-~~~s~~~~Fey~~~~l~~-~~~~~~d~~~~~~~~l~~- 376 (816)
.++.-++++++..+++.|.-+.+.. .-|..||+.++... ....+++.+- +.. ...+..+..|+++++...
T Consensus 20 ~~~~~~~~~~v~~Ll~~ga~vn~~~--~~g~t~Lh~a~~~~~~~~~~iv~~L-----l~~Gadin~~~~~g~TpLh~A~~ 92 (471)
T PHA03095 20 LNASNVTVEEVRRLLAAGADVNFRG--EYGKTPLHLYLHYSSEKVKDIVRLL-----LEAGADVNAPERCGFTPLHLYLY 92 (471)
T ss_pred HcCCCCCHHHHHHHHHcCCCcccCC--CCCCCHHHHHHHhcCCChHHHHHHH-----HHCCCCCCCCCCCCCCHHHHHHH
Confidence 4566788899999999887654432 34677777666443 1111111111 111 112223557899999854
Q ss_pred -----HHHHHHhcCcccccccccCCCCCcHHHHHHHhhhhhc--cC---CcHHHHHHhhCCCCCCCCccCcHHHHHHHcC
Q 003477 377 -----RLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTC--IS---NSWAYLFKSVGDKRTSLPEAKDSFFELTLKS 446 (816)
Q Consensus 377 -----rla~lL~~~~~~lqil~~~~~~~~l~e~~~~a~~i~~--~~---~~~~~li~~l~~~~~~~~~g~t~L~~Aa~~~ 446 (816)
.+.++|...+..+...... +. ....... .. +-...++....+.+.....|.||||.++..+
T Consensus 93 ~~~~~~iv~lLl~~ga~in~~~~~--g~-------tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~ 163 (471)
T PHA03095 93 NATTLDVIKLLIKAGADVNAKDKV--GR-------TPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSR 163 (471)
T ss_pred cCCcHHHHHHHHHcCCCCCCCCCC--CC-------CHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4566766555543322211 11 1111111 11 1233445555566666778999999998877
Q ss_pred CcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHc--CChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCH--HHHHHH
Q 003477 447 KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAML--GYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE--KMVVDL 521 (816)
Q Consensus 447 ~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~--G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~--eiV~lL 521 (816)
+...-+++.|++ |++++..|..|.||||+|+.. +...+++.|+++|++++.+|..|+||||+||..|+. .++..|
T Consensus 164 ~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~l 243 (471)
T PHA03095 164 NANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPL 243 (471)
T ss_pred CCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHH
Confidence 533227788887 999999999999999999875 678999999999999999999999999999999975 688899
Q ss_pred HhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCccc
Q 003477 522 LSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 574 (816)
Q Consensus 522 L~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~l 574 (816)
+..|+++|. +|..|.||||+|+..|+.+++++|+++|++++..+..-
T Consensus 244 l~~g~din~------~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g 290 (471)
T PHA03095 244 LIAGISINA------RNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDG 290 (471)
T ss_pred HHcCCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 999999998 88999999999999999999999999999987766543
No 22
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.76 E-value=1.8e-17 Score=191.68 Aligned_cols=146 Identities=18% Similarity=0.215 Sum_probs=130.1
Q ss_pred HHHHhhCCCCCCCCccCcHHHHHHHcC--CcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCc
Q 003477 420 YLFKSVGDKRTSLPEAKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD 496 (816)
Q Consensus 420 ~li~~l~~~~~~~~~g~t~L~~Aa~~~--~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin 496 (816)
.++....+.+.....|.||||.|+..+ +.. +++.|++ |++++..|..|.||||+|+..|+.+++++|+++|++++
T Consensus 126 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~--iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~ 203 (480)
T PHA03100 126 YLLDNGANVNIKNSDGENLLHLYLESNKIDLK--ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN 203 (480)
T ss_pred HHHHcCCCCCccCCCCCcHHHHHHHcCCChHH--HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc
Confidence 333334455555678999999999999 666 7888888 99999999999999999999999999999999999999
Q ss_pred cccCCC------CcHHHHHHHcCC--HHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhcc
Q 003477 497 FRDKYG------WTALHWAAYYGR--EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 568 (816)
Q Consensus 497 ~~D~~G------~TpLh~Aa~~G~--~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 568 (816)
..+..| .||||+|+..|+ .+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 204 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~------~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n 277 (480)
T PHA03100 204 AGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI------KDVYGFTPLHYAVYNNNPEFVKYLLDLGANPN 277 (480)
T ss_pred CCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999 999999999999 9999999999999998 88999999999999999999999999999887
Q ss_pred ccCcc
Q 003477 569 FNDMT 573 (816)
Q Consensus 569 l~~l~ 573 (816)
..+..
T Consensus 278 ~~d~~ 282 (480)
T PHA03100 278 LVNKY 282 (480)
T ss_pred ccCCC
Confidence 66543
No 23
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.75 E-value=3.4e-18 Score=167.80 Aligned_cols=130 Identities=16% Similarity=0.204 Sum_probs=109.8
Q ss_pred CccCcHHHHHHHcCCcHHHHHHH-HHcC---CCCCccCcCCCchHHHHHHcCChh---hHHHHHhCCCCCccccC-CCCc
Q 003477 433 PEAKDSFFELTLKSKLKEWLLER-VVEG---SKTTEYDVHGQGVIHLCAMLGYTW---AILLFSWSGLSLDFRDK-YGWT 504 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~-Ll~g---a~in~~d~~G~TpLHlAa~~G~~~---iv~~LL~~Gadin~~D~-~G~T 504 (816)
..|.||||+|+..|+..+.+... .... ..++..|..|.||||+|+..|+.+ ++++|+..|+++|.+|. .|+|
T Consensus 15 ~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T 94 (154)
T PHA02736 15 IEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNT 94 (154)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCc
Confidence 56999999999999865422211 1111 123347899999999999999864 68899999999999984 8999
Q ss_pred HHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhcc
Q 003477 505 ALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 568 (816)
Q Consensus 505 pLh~Aa~~G~~eiV~lLL~-~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 568 (816)
|||+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 95 ~Lh~A~~~~~~~i~~~Ll~~~g~d~n~------~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 95 PLHIAVYTQNYELATWLCNQPGVNMEI------LNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCcc------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999997 5999998 89999999999999999999999999998764
No 24
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.75 E-value=4.1e-18 Score=195.27 Aligned_cols=135 Identities=19% Similarity=0.181 Sum_probs=122.1
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHh-CC-CCCccccCCCCcHHHH
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SG-LSLDFRDKYGWTALHW 508 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~-~G-adin~~D~~G~TpLh~ 508 (816)
..+|.||||+||.+|+.. .++.|+. |++++.+++++.||||.||..|...+|+-||+ .| ..+|..|..|.||||.
T Consensus 270 d~dg~tpLH~a~r~G~~~--svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHl 347 (929)
T KOG0510|consen 270 DNDGCTPLHYAARQGGPE--SVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHL 347 (929)
T ss_pred cccCCchHHHHHHcCChh--HHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhh
Confidence 466999999999999998 6888888 99999999999999999999999999999998 55 4678999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccC
Q 003477 509 AAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 509 Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 571 (816)
|+..||.+++++||.+||+..... ..|.+|.||||+|+..|+..++++|+.+|++....+
T Consensus 348 aa~~gH~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n 407 (929)
T KOG0510|consen 348 AAKSGHDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKN 407 (929)
T ss_pred hhhcCHHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCceeecc
Confidence 999999999999999999987311 148999999999999999999999999999985543
No 25
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.75 E-value=5.6e-18 Score=205.10 Aligned_cols=244 Identities=17% Similarity=0.206 Sum_probs=179.7
Q ss_pred CCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcccccccccCCCCCcCCCCCccccccchhHHHHHH
Q 003477 297 KSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQVQM 376 (816)
Q Consensus 297 ~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~s~~~~Fey~~~~l~~~~~~~~d~~~~~~~~l~~ 376 (816)
..+.+|.-|.++++..++..|...|..+ .+|+.||+++.....+-.-.+.|+-.. ....-+..|.+++++..
T Consensus 377 pl~la~~~g~~~~v~Lll~~ga~~~~~g--k~gvTplh~aa~~~~~~~v~l~l~~gA------~~~~~~~lG~T~lhvaa 448 (1143)
T KOG4177|consen 377 PLHLAVKSGRVSVVELLLEAGADPNSAG--KNGVTPLHVAAHYGNPRVVKLLLKRGA------SPNAKAKLGYTPLHVAA 448 (1143)
T ss_pred chhhhcccCchhHHHhhhhccCCcccCC--CCCcceeeehhhccCcceEEEEeccCC------ChhhHhhcCCChhhhhh
Confidence 5689999999999999999998744332 789999998885432211112222111 11112455678887744
Q ss_pred HHH------HHHhcCccccccccc-CCCCCcHHHHHHHhhhhhccCCcHHHHHHhh----CCCCCCCCccCcHHHHHHHc
Q 003477 377 RLA------HLLFSSFKGLNILSS-KVPPNSLKEAKKFASKSTCISNSWAYLFKSV----GDKRTSLPEAKDSFFELTLK 445 (816)
Q Consensus 377 rla------~lL~~~~~~lqil~~-~~~~~~l~e~~~~a~~i~~~~~~~~~li~~l----~~~~~~~~~g~t~L~~Aa~~ 445 (816)
... .++.......+++.. +.++ .......+|..+...+ ...++..+.+-+++|.+...
T Consensus 449 ~~g~~~~~~~~l~~~g~~~n~~s~~G~T~-----------Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~ 517 (1143)
T KOG4177|consen 449 KKGRYLQIARLLLQYGADPNAVSKQGFTP-----------LHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADE 517 (1143)
T ss_pred hcccHhhhhhhHhhcCCCcchhccccCcc-----------hhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhh
Confidence 333 222222222222111 1111 1112224444444443 33466678899999999999
Q ss_pred CCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 003477 446 SKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSA 524 (816)
Q Consensus 446 ~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~ 524 (816)
+... ..+.+.+ |++++.++..|.||||.||..|+..+|++||++|++++.+|+.|+||||.||..|+.+|+.+|+++
T Consensus 518 ~~v~--~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~ 595 (1143)
T KOG4177|consen 518 DTVK--VAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH 595 (1143)
T ss_pred hhHH--HHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHc
Confidence 8877 4555665 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhc
Q 003477 525 GAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 567 (816)
Q Consensus 525 GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 567 (816)
||++|+ .|.+|.|||++|+..|+.+++++|+..++++
T Consensus 596 GA~vna------~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 596 GASVNA------ADLDGFTPLHIAVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred CCCCCc------ccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence 999999 8999999999999999999999999999884
No 26
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.75 E-value=1.5e-17 Score=192.73 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=106.7
Q ss_pred HHHHHHc-CCCCCccCcC-CCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 003477 452 LLERVVE-GSKTTEYDVH-GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPN 529 (816)
Q Consensus 452 lv~~Ll~-ga~in~~d~~-G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n 529 (816)
+++.|++ |+++|..|.. |.||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in 228 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD 228 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5566666 9999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHhhhhhccccC
Q 003477 530 LVTDPTSQNPGGLNAADIASKK-GFDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 530 ~~td~~~~d~~G~TpL~lA~~~-G~~~iv~lLle~Ga~~~l~~ 571 (816)
. +|..|.||||+|+.. ++.+++++|+++|++.+..+
T Consensus 229 ~------~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~ 265 (477)
T PHA02878 229 A------RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS 265 (477)
T ss_pred C------CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccC
Confidence 8 899999999999975 78999999999999987654
No 27
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.74 E-value=3.6e-17 Score=187.19 Aligned_cols=144 Identities=15% Similarity=0.125 Sum_probs=123.7
Q ss_pred HHHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc------------------------CCCCCccCcCCCchHHH
Q 003477 420 YLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE------------------------GSKTTEYDVHGQGVIHL 475 (816)
Q Consensus 420 ~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~------------------------ga~in~~d~~G~TpLHl 475 (816)
.+++.+.+.+.....+.+||+.|+..++.. ++++|++ |++++..|..|.||||+
T Consensus 53 ~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~--iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~ 130 (434)
T PHA02874 53 LFIKHGADINHINTKIPHPLLTAIKIGAHD--IIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHY 130 (434)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCCHH--HHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHH
Confidence 344444444445566888999999888876 5555544 45677889999999999
Q ss_pred HHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 003477 476 CAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDG 555 (816)
Q Consensus 476 Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~ 555 (816)
|+..|+.+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|+.+
T Consensus 131 A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~------~~~~g~tpL~~A~~~g~~~ 204 (434)
T PHA02874 131 AIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV------KDNNGESPLHNAAEYGDYA 204 (434)
T ss_pred HHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999998 8899999999999999999
Q ss_pred HHHHHHhhhhhccccC
Q 003477 556 LAAFLSEQALVAQFND 571 (816)
Q Consensus 556 iv~lLle~Ga~~~l~~ 571 (816)
++++|++.|++....+
T Consensus 205 iv~~Ll~~g~~i~~~~ 220 (434)
T PHA02874 205 CIKLLIDHGNHIMNKC 220 (434)
T ss_pred HHHHHHhCCCCCcCCC
Confidence 9999999998865543
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.74 E-value=2.6e-17 Score=191.44 Aligned_cols=152 Identities=14% Similarity=0.081 Sum_probs=112.8
Q ss_pred HHHHhhCCCCCCCCccCcHHHHHHHc---CCcHHHHHHHHHc-CCCC-CccCcCCCchHHHHHHc--CChhhHHHHHhCC
Q 003477 420 YLFKSVGDKRTSLPEAKDSFFELTLK---SKLKEWLLERVVE-GSKT-TEYDVHGQGVIHLCAML--GYTWAILLFSWSG 492 (816)
Q Consensus 420 ~li~~l~~~~~~~~~g~t~L~~Aa~~---~~l~~~lv~~Ll~-ga~i-n~~d~~G~TpLHlAa~~--G~~~iv~~LL~~G 492 (816)
.+++.+.+.+.....|.||||.|+.. ++.+ ++++|++ |+++ +..|..|.||||+|+.. ++.+++++|+++|
T Consensus 93 ~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~e--iv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~G 170 (494)
T PHA02989 93 LLLKFGADINLKTFNGVSPIVCFIYNSNINNCD--MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFG 170 (494)
T ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHH--HHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcC
Confidence 34444555566666788888877654 3344 6777777 8888 67788888888887654 5678888888888
Q ss_pred CCCcc-ccCCCCcHHHHHHHcC----CHHHHHHHHhcCCCCCCCC--------------------------------CCC
Q 003477 493 LSLDF-RDKYGWTALHWAAYYG----REKMVVDLLSAGAKPNLVT--------------------------------DPT 535 (816)
Q Consensus 493 adin~-~D~~G~TpLh~Aa~~G----~~eiV~lLL~~GAd~n~~t--------------------------------d~~ 535 (816)
++++. .|..|.||||+|+..+ +.+++++|+++|++++..+ |++
T Consensus 171 adi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn 250 (494)
T PHA02989 171 VNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKIN 250 (494)
T ss_pred CCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCC
Confidence 88887 5677888888877654 7788888888888876543 235
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcc
Q 003477 536 SQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 536 ~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
.+|..|.||||+|+..|+.+++++|+++|++.+..+..
T Consensus 251 ~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~ 288 (494)
T PHA02989 251 KKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKD 288 (494)
T ss_pred CCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCC
Confidence 57788899999999999999999999999888766543
No 29
>PHA02798 ankyrin-like protein; Provisional
Probab=99.74 E-value=1.9e-17 Score=192.34 Aligned_cols=157 Identities=15% Similarity=0.112 Sum_probs=130.2
Q ss_pred HHHHHHhhCCCCCCCCccCcHHHHHHHcCC--cHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCC---hhhHHHHHhC
Q 003477 418 WAYLFKSVGDKRTSLPEAKDSFFELTLKSK--LKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY---TWAILLFSWS 491 (816)
Q Consensus 418 ~~~li~~l~~~~~~~~~g~t~L~~Aa~~~~--l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~---~~iv~~LL~~ 491 (816)
...+++.+.+.+.....|.||||.|+..+. ..+ ++++|++ |++++..|..|.||||+|+..|+ .+++++|+++
T Consensus 92 v~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~-iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~ 170 (489)
T PHA02798 92 VKILIENGADINKKNSDGETPLYCLLSNGYINNLE-ILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK 170 (489)
T ss_pred HHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHH-HHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHh
Confidence 334445556666667789999999998763 223 7777777 99999999999999999999988 8999999999
Q ss_pred CCCCcccc-CCCCcHHHHHHHc----CCHHHHHHHHhcCCCCCCCC---------------------------------C
Q 003477 492 GLSLDFRD-KYGWTALHWAAYY----GREKMVVDLLSAGAKPNLVT---------------------------------D 533 (816)
Q Consensus 492 Gadin~~D-~~G~TpLh~Aa~~----G~~eiV~lLL~~GAd~n~~t---------------------------------d 533 (816)
|+++|.++ ..|.||||.++.. ++.+++++|+++|++++..+ |
T Consensus 171 gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~d 250 (489)
T PHA02798 171 GVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYID 250 (489)
T ss_pred CCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCC
Confidence 99999886 4799999998764 47899999999999887531 4
Q ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcccc
Q 003477 534 PTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 575 (816)
Q Consensus 534 ~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~l~ 575 (816)
++.+|..|.||||+|+..|+.+++++|+++|++.+..+....
T Consensus 251 vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~ 292 (489)
T PHA02798 251 INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGN 292 (489)
T ss_pred CCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCC
Confidence 566888999999999999999999999999999877665433
No 30
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.73 E-value=3e-17 Score=201.78 Aligned_cols=136 Identities=11% Similarity=0.026 Sum_probs=86.9
Q ss_pred CCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcH
Q 003477 427 DKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTA 505 (816)
Q Consensus 427 ~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~Tp 505 (816)
+.+.....|.||||.|+..|+.+ +++.|++ |+++|.+|.+|.||||+|+..|+.+++++|+..++..+. ..|.||
T Consensus 550 d~n~~d~~G~TpLh~Aa~~g~~~--~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~ 625 (823)
T PLN03192 550 DPDIGDSKGRTPLHIAASKGYED--CVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDL 625 (823)
T ss_pred CCCCCCCCCCCHHHHHHHcChHH--HHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchH
Confidence 33333444455555555544443 3444444 455555555555555555555555555555444433321 223445
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCc
Q 003477 506 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 572 (816)
Q Consensus 506 Lh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l 572 (816)
||+||..|+.+++++|+++|+++|. +|.+|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 626 L~~Aa~~g~~~~v~~Ll~~Gadin~------~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~ 686 (823)
T PLN03192 626 LCTAAKRNDLTAMKELLKQGLNVDS------EDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANT 686 (823)
T ss_pred HHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCC
Confidence 5566666777777778888888888 899999999999999999999999999999877654
No 31
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.73 E-value=2.9e-17 Score=195.58 Aligned_cols=147 Identities=14% Similarity=0.050 Sum_probs=124.8
Q ss_pred HHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHH-----------------------
Q 003477 421 LFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLC----------------------- 476 (816)
Q Consensus 421 li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlA----------------------- 476 (816)
++....+.+.....|.||||.|+..|+...-++++|++ |+++|.+|..|+||||+|
T Consensus 198 LLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~ 277 (764)
T PHA02716 198 LCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK 277 (764)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc
Confidence 34444455566678999999999999752127888888 999999999999999975
Q ss_pred --------------HHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHH--cCCHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 003477 477 --------------AMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPG 540 (816)
Q Consensus 477 --------------a~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~--~G~~eiV~lLL~~GAd~n~~td~~~~d~~ 540 (816)
+..|+.+++++|+++|+++|.+|..|+||||+|+. .|+.+++++|+++|++++. +|..
T Consensus 278 ~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~------kD~~ 351 (764)
T PHA02716 278 VKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE------PDNI 351 (764)
T ss_pred cccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc------CCCC
Confidence 34577889999999999999999999999999875 4689999999999999998 8999
Q ss_pred CCCHHHHHHH--------------cCCHHHHHHHHhhhhhccccCcc
Q 003477 541 GLNAADIASK--------------KGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 541 G~TpL~lA~~--------------~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
|.||||+|+. .++.+++++|+++|++.+..+..
T Consensus 352 G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~ 398 (764)
T PHA02716 352 GNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCL 398 (764)
T ss_pred CCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCC
Confidence 9999999865 37899999999999998776644
No 32
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.72 E-value=5e-17 Score=168.11 Aligned_cols=131 Identities=11% Similarity=0.124 Sum_probs=114.7
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHcCCCCCccCcCCCchHHHHHHcC--ChhhHHHHHhCCCCCccccC-CCCcHHHHH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGLSLDFRDK-YGWTALHWA 509 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~ga~in~~d~~G~TpLHlAa~~G--~~~iv~~LL~~Gadin~~D~-~G~TpLh~A 509 (816)
....+||+.|+..++.. +++.|++. ++..|..|.||||+|+..+ +.+++++|+++|+++|.+|. .|+||||+|
T Consensus 19 ~~~~~pL~~A~~~~~~~--~vk~Li~~--~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 19 YRYCNPLFYYVEKDDIE--GVKKWIKF--VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred hccCcHHHHHHHhCcHH--HHHHHHHh--hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 45789999999999998 67777763 5678899999999999855 78999999999999999974 899999998
Q ss_pred HHc---CCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHH--cCCHHHHHHHHhhhhhccccCcc
Q 003477 510 AYY---GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 510 a~~---G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~--~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
+.. ++.+++++|+++|++++. +|..|.||||+|+. .++.+++++|+++|++.+..+..
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~------~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~ 157 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITE------EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFD 157 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCC
Confidence 864 479999999999999998 89999999999876 47899999999999998766543
No 33
>PHA02795 ankyrin-like protein; Provisional
Probab=99.72 E-value=8.9e-17 Score=180.41 Aligned_cols=129 Identities=20% Similarity=0.140 Sum_probs=114.9
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCc-c-----CcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTE-Y-----DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTA 505 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~-~-----d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~Tp 505 (816)
.++.||+|.|+..++.+ +++.|+. |++.+. . +..|.|++|.|+..++.+++++|+++|+++|.+|..|+||
T Consensus 147 ~~~~t~lh~A~~~~~~e--IVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~Tp 224 (437)
T PHA02795 147 IECLNAYFRGICKKESS--VVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTL 224 (437)
T ss_pred CCCCCHHHHHHHcCcHH--HHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCH
Confidence 45689999999999888 8898888 874332 2 2358899999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcC--------CHHHHHHHHhhhhhccc
Q 003477 506 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--------FDGLAAFLSEQALVAQF 569 (816)
Q Consensus 506 Lh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G--------~~~iv~lLle~Ga~~~l 569 (816)
||+|+..|+.+++++|+++||+++. +|..|.||||+|+..| |.+++++|+++|++.+.
T Consensus 225 Lh~Aa~~g~~eiVelLL~~GAdIN~------~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~ 290 (437)
T PHA02795 225 LYRAIYAGYIDLVSWLLENGANVNA------VMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC 290 (437)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999999 8999999999999998 46999999999986643
No 34
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.71 E-value=6.2e-17 Score=192.80 Aligned_cols=134 Identities=14% Similarity=0.064 Sum_probs=117.0
Q ss_pred CCccCcHHHHHHHc--CCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCC--hhhHHHHHhCCCCCccccCCCCcHH
Q 003477 432 LPEAKDSFFELTLK--SKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAILLFSWSGLSLDFRDKYGWTAL 506 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~--~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~--~~iv~~LL~~Gadin~~D~~G~TpL 506 (816)
...|.||||.|+.. ++.. ++++|++ |+++|..|..|.||||+|+..|+ .++|++|+++|+++|.+|..|+|||
T Consensus 174 d~~G~TpLH~A~~n~~~~~e--IVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPL 251 (764)
T PHA02716 174 KKTGYGILHAYLGNMYVDID--ILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPI 251 (764)
T ss_pred CCCCCcHHHHHHHhccCCHH--HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 55799999987654 3344 7888888 99999999999999999999996 4899999999999999999999999
Q ss_pred HHH-------------------------------------HHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003477 507 HWA-------------------------------------AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 549 (816)
Q Consensus 507 h~A-------------------------------------a~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~ 549 (816)
|+| +..|+.+++++|+++|++++. +|..|.||||+|+
T Consensus 252 h~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~------kD~~G~TPLH~Aa 325 (764)
T PHA02716 252 MTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHY------KDSAGRTCLHQYI 325 (764)
T ss_pred HHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceec------cCCCCCCHHHHHH
Confidence 975 445788999999999999998 8999999999976
Q ss_pred H--cCCHHHHHHHHhhhhhccccCcc
Q 003477 550 K--KGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 550 ~--~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
. .++.+++++|+++|++.+..+..
T Consensus 326 a~~~~~~eIVklLLe~GADIN~kD~~ 351 (764)
T PHA02716 326 LRHNISTDIIKLLHEYGNDLNEPDNI 351 (764)
T ss_pred HHhCCCchHHHHHHHcCCCCccCCCC
Confidence 4 56899999999999998776644
No 35
>PHA02946 ankyin-like protein; Provisional
Probab=99.71 E-value=7.6e-17 Score=184.96 Aligned_cols=143 Identities=11% Similarity=0.072 Sum_probs=97.0
Q ss_pred HHHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCC--hhhHHHHHhCCCCCc
Q 003477 420 YLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAILLFSWSGLSLD 496 (816)
Q Consensus 420 ~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~--~~iv~~LL~~Gadin 496 (816)
.++....+.+.....|.||||.|+..|+.+ ++++|++ |+++|.+|..|.||||+|+..+. .+++++|+++|+++|
T Consensus 57 ~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~e--iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin 134 (446)
T PHA02946 57 ELLHRGYSPNETDDDGNYPLHIASKINNNR--IVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKIN 134 (446)
T ss_pred HHHHCcCCCCccCCCCCCHHHHHHHcCCHH--HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcc
Confidence 344444455555566777777777777766 6666666 77777777777777777766553 566777777777777
Q ss_pred c-ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcC--CHHHHHHHHhhhhhccccC
Q 003477 497 F-RDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 497 ~-~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G--~~~iv~lLle~Ga~~~l~~ 571 (816)
. .|..|.|||| ||..|+.+++++|++.|++++. +|..|.||||+|+..+ +.+++++|+++|++.+..+
T Consensus 135 ~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~------~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d 205 (446)
T PHA02946 135 NSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARI------VDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPD 205 (446)
T ss_pred cccCCCCCcHHH-HHHCCChHHHHHHHhccccccc------cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccC
Confidence 4 5667777776 5556777777777777777776 6677777777766543 3467777777777665544
No 36
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.70 E-value=1.2e-16 Score=172.73 Aligned_cols=122 Identities=16% Similarity=0.097 Sum_probs=107.2
Q ss_pred CccCcHHHHHHHc-CCcHHHHHHHHHc-CCCCCcc----CcCCCchHHHHHHcCChhhHHHHHhCCCCCcccc-CCCCcH
Q 003477 433 PEAKDSFFELTLK-SKLKEWLLERVVE-GSKTTEY----DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTA 505 (816)
Q Consensus 433 ~~g~t~L~~Aa~~-~~l~~~lv~~Ll~-ga~in~~----d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D-~~G~Tp 505 (816)
..+.+++++++.+ ++.+ +++.|++ |+++|.+ +..|.||||+|+..|+.+++++|+++|+++|.++ ..|.||
T Consensus 30 ~~~~~~lL~~A~~~~~~e--ivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~Tp 107 (300)
T PHA02884 30 KICIANILYSSIKFHYTD--IIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITP 107 (300)
T ss_pred cCCCCHHHHHHHHcCCHH--HHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCH
Confidence 4567776666555 5555 7888888 9999987 4589999999999999999999999999999974 589999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q 003477 506 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 562 (816)
Q Consensus 506 Lh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle 562 (816)
||+|+..|+.+++++|+.+|++++. +|..|.||||+|+..++.+++.++..
T Consensus 108 Lh~Aa~~~~~eivklLL~~GAdin~------kd~~G~TpL~~A~~~~~~~~~~~~~~ 158 (300)
T PHA02884 108 LYISVLHGCLKCLEILLSYGADINI------QTNDMVTPIELALMICNNFLAFMICD 158 (300)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHhCChhHHHHhcC
Confidence 9999999999999999999999998 88999999999999999988766653
No 37
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.69 E-value=1.4e-16 Score=182.71 Aligned_cols=250 Identities=16% Similarity=0.159 Sum_probs=166.6
Q ss_pred CCCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcccccccccCCCCCcCCCCCccccccchhHHHHH
Q 003477 296 SKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQVQ 375 (816)
Q Consensus 296 ~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~s~~~~Fey~~~~l~~~~~~~~d~~~~~~~~l~ 375 (816)
++.+|++.....+....+++.|+.--++ ...+..|++++.++..--.--+...|+ ...+.+|+.+.||+|+.
T Consensus 90 ~~l~~a~~~~~~~~i~~Lls~gad~~~~--n~~~~aplh~A~~~~~~s~L~~Ll~~~------~dvnl~de~~~TpLh~A 161 (929)
T KOG0510|consen 90 TPLHAAVEYNQGDKIQVLLSYGADTPLR--NLNKNAPLHLAADSGNYSCLKLLLDYG------ADVNLEDENGFTPLHLA 161 (929)
T ss_pred chhHHHhhcchHHHHHHHHhcCCCCChh--hhhccCchhhccccchHHHHHHHHHhc------CCccccccCCCchhhHH
Confidence 3567777777777777788877643222 156667777776543211111222333 12233466777888883
Q ss_pred -----HHHHHHHhcCcccccccccCCCCCc-HHHHHHHhhhhhccCCcHHHHHH-----hhCCCCCCCCccCcHHHHHHH
Q 003477 376 -----MRLAHLLFSSFKGLNILSSKVPPNS-LKEAKKFASKSTCISNSWAYLFK-----SVGDKRTSLPEAKDSFFELTL 444 (816)
Q Consensus 376 -----~rla~lL~~~~~~lqil~~~~~~~~-l~e~~~~a~~i~~~~~~~~~li~-----~l~~~~~~~~~g~t~L~~Aa~ 444 (816)
.+..++|.....+.. .....++. +.++.. .+..+..+-.+. .....+...+++.+|||.|+.
T Consensus 162 ~~~~~~E~~k~Li~~~a~~~--K~~~~~~~~iH~aa~-----s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve 234 (929)
T KOG0510|consen 162 ARKNKVEAKKELINKGADPC--KSDIDGNFPIHEAAR-----SGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVE 234 (929)
T ss_pred HhcChHHHHHHHHhcCCCCC--cccCcCCchHHHHHH-----hcchhhhhhhhccccchhhcccccccCCCCcchhhhhh
Confidence 344444443333211 11111111 111110 001111122222 223445667889999999999
Q ss_pred cCCcHHHHHHHHHc-CCC---------------CCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHH
Q 003477 445 KSKLKEWLLERVVE-GSK---------------TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 508 (816)
Q Consensus 445 ~~~l~~~lv~~Ll~-ga~---------------in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~ 508 (816)
.|+.+ .++.+++ |.. +|..|.+|.||||+||..|+.+++..|+..|++++.++.++.||||.
T Consensus 235 ~g~~e--~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~ 312 (929)
T KOG0510|consen 235 GGDIE--MLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHF 312 (929)
T ss_pred cCCHH--HHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHH
Confidence 99988 4554444 432 24468999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHh-cCC-CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhcc
Q 003477 509 AAYYGREKMVVDLLS-AGA-KPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 568 (816)
Q Consensus 509 Aa~~G~~eiV~lLL~-~GA-d~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 568 (816)
||.+|+..+|+-||+ .|- ..|. .|-.|.||||+|+..||..++++|++.||..+
T Consensus 313 AA~yg~~ntv~rLL~~~~~rllne------~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 313 AAIYGRINTVERLLQESDTRLLNE------SDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred HHHcccHHHHHHHHhCcCcccccc------ccccCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence 999999999999998 442 2233 88999999999999999999999999999876
No 38
>PHA02798 ankyrin-like protein; Provisional
Probab=99.69 E-value=4.3e-16 Score=181.06 Aligned_cols=143 Identities=12% Similarity=0.096 Sum_probs=109.3
Q ss_pred HHHHhhCCCCCCCCccCcHHHHHHHcCC---cHHHHHHHHHc-CCCCCccC-cCCCchHHHHHHc----CChhhHHHHHh
Q 003477 420 YLFKSVGDKRTSLPEAKDSFFELTLKSK---LKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAML----GYTWAILLFSW 490 (816)
Q Consensus 420 ~li~~l~~~~~~~~~g~t~L~~Aa~~~~---l~~~lv~~Ll~-ga~in~~d-~~G~TpLHlAa~~----G~~~iv~~LL~ 490 (816)
.++..+.+.+.....|.||||.|+..++ .. ++++|++ |++++..+ ..|.||||.++.. ++.+++++|++
T Consensus 130 ~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~--vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~ 207 (489)
T PHA02798 130 FMIENGADTTLLDKDGFTMLQVYLQSNHHIDIE--IIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVD 207 (489)
T ss_pred HHHHcCCCccccCCCCCcHHHHHHHcCCcchHH--HHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHH
Confidence 3344444555555667777777777665 33 5666666 77777653 4577777766543 24566666665
Q ss_pred CCC---------------------------------------CCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 003477 491 SGL---------------------------------------SLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLV 531 (816)
Q Consensus 491 ~Ga---------------------------------------din~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~ 531 (816)
+|+ ++|.+|..|+||||+|+..|+.+++++||++||+++.
T Consensus 208 ~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~- 286 (489)
T PHA02798 208 NGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINI- 286 (489)
T ss_pred CCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccc-
Confidence 554 5666788899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhcccc
Q 003477 532 TDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 570 (816)
Q Consensus 532 td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 570 (816)
+|..|.||||+|+.+|+.++++.|++++++.+.-
T Consensus 287 -----~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~i 320 (489)
T PHA02798 287 -----ITELGNTCLFTAFENESKFIFNSILNKKPNKNTI 320 (489)
T ss_pred -----cCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHHH
Confidence 8899999999999999999999999999887543
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.69 E-value=4.7e-17 Score=161.91 Aligned_cols=132 Identities=18% Similarity=0.205 Sum_probs=123.6
Q ss_pred CCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHH
Q 003477 431 SLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 509 (816)
Q Consensus 431 ~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~A 509 (816)
....|.|||++|+.+|++. ++++|++ |++++...+...|+|.+|+..||.++|++||.++.|+|..|-+|-|||-+|
T Consensus 156 ~De~GfTpLiWAaa~G~i~--vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyA 233 (296)
T KOG0502|consen 156 CDEFGFTPLIWAAAKGHIP--VVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYA 233 (296)
T ss_pred ccccCchHhHHHHhcCchH--HHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeee
Confidence 3466999999999999999 8999998 999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccC
Q 003477 510 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 510 a~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 571 (816)
+..||.+||+.||..||+++. .+..|.+++++|+..|+. +++..+++-+...+++
T Consensus 234 vrgnhvkcve~Ll~sGAd~t~------e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~ 288 (296)
T KOG0502|consen 234 VRGNHVKCVESLLNSGADVTQ------EDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQD 288 (296)
T ss_pred ecCChHHHHHHHHhcCCCccc------ccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhc
Confidence 999999999999999999998 889999999999999998 8888888877766555
No 40
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.69 E-value=5.1e-17 Score=176.58 Aligned_cols=132 Identities=15% Similarity=0.205 Sum_probs=123.7
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHH
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 510 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa 510 (816)
..+|-+||..|+..|+++ +++.|++ |+++|.......|||--||.-|+.++|++|+++|+|++..|..|.|-||+||
T Consensus 81 ~IegappLWaAsaAGHl~--vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ 158 (615)
T KOG0508|consen 81 TIEGAPPLWAASAAGHLE--VVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIAC 158 (615)
T ss_pred ccCCCchhhHHhccCcHH--HHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeee
Confidence 345778888899999999 8998888 9999999888999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccC
Q 003477 511 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 511 ~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 571 (816)
+.||.+|+++|++.|||+|. ++..|.|+||.|+..|+.+|+++|+.+|+......
T Consensus 159 ykGh~~I~qyLle~gADvn~------ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~ 213 (615)
T KOG0508|consen 159 YKGHVDIAQYLLEQGADVNA------KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDG 213 (615)
T ss_pred ccCchHHHHHHHHhCCCcch------hcccCchHHHhhhhcccHHHHHHHHhCCceeeecC
Confidence 99999999999999999999 89999999999999999999999999998765543
No 41
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.68 E-value=6.1e-17 Score=196.20 Aligned_cols=148 Identities=20% Similarity=0.245 Sum_probs=136.4
Q ss_pred HhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCC
Q 003477 423 KSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKY 501 (816)
Q Consensus 423 ~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~ 501 (816)
+...+.+.....|.||||.++..|+.. ++..+++ ++..+...+.|-|+||+|+..++..+++.++++|++++.++..
T Consensus 462 ~~g~~~n~~s~~G~T~Lhlaaq~Gh~~--~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r 539 (1143)
T KOG4177|consen 462 QYGADPNAVSKQGFTPLHLAAQEGHTE--VVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGR 539 (1143)
T ss_pred hcCCCcchhccccCcchhhhhccCCch--HHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhccc
Confidence 344666777889999999999999988 6777777 7788888889999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCccccccc
Q 003477 502 GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNI 578 (816)
Q Consensus 502 G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~l~~~i 578 (816)
|+||||.||.+|+..+|++||++||++++ +++.|+||||.|+..|+.+|+.+|+++|++++..++...+.+
T Consensus 540 ~~TpLh~A~~~g~v~~VkfLLe~gAdv~a------k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL 610 (1143)
T KOG4177|consen 540 GYTPLHVAVHYGNVDLVKFLLEHGADVNA------KDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPL 610 (1143)
T ss_pred ccchHHHHHhcCCchHHHHhhhCCccccc------cCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchh
Confidence 99999999999999999999999999999 889999999999999999999999999999999888776643
No 42
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.66 E-value=5.3e-16 Score=180.57 Aligned_cols=126 Identities=12% Similarity=0.040 Sum_probs=99.3
Q ss_pred CCccCcHHHHHHHcC----CcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcC------ChhhHHHHHhCCCCCccccC
Q 003477 432 LPEAKDSFFELTLKS----KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG------YTWAILLFSWSGLSLDFRDK 500 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~----~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G------~~~iv~~LL~~Gadin~~D~ 500 (816)
...|.||||.++..+ +.+ ++++|++ |+++|..|..|.|+||.++..+ ...++++|+ .|+++|.+|.
T Consensus 178 ~~~g~tpL~~a~~~~~~~~~~~--iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~-~~advn~~d~ 254 (494)
T PHA02989 178 SLYGLTPMNIYLRNDIDVISIK--VIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFIL-KYIKINKKDK 254 (494)
T ss_pred cccCCChHHHHHhcccccccHH--HHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHH-hCCCCCCCCC
Confidence 345777777766543 444 5666666 7777777777777777655432 345555544 4578888888
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhh
Q 003477 501 YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 566 (816)
Q Consensus 501 ~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~ 566 (816)
.|+||||+|+..|+.+++++|+++||+++. +|..|.||||+|+..|+.+++++|++.+..
T Consensus 255 ~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~------~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 255 KGFNPLLISAKVDNYEAFNYLLKLGDDIYN------VSKDGDTVLTYAIKHGNIDMLNRILQLKPG 314 (494)
T ss_pred CCCCHHHHHHHhcCHHHHHHHHHcCCCccc------cCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 999999999999999999999999999999 899999999999999999999999987643
No 43
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.66 E-value=2.7e-16 Score=151.47 Aligned_cols=126 Identities=21% Similarity=0.244 Sum_probs=106.6
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc--CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCC
Q 003477 437 DSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 514 (816)
Q Consensus 437 t~L~~Aa~~~~l~~~lv~~Ll~--ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~ 514 (816)
.-+++|+.++.+.+ ++.|++ ..-+|.+|.+|.||||-|+..|+.++|..|+..|++++.+...||||||-||..++
T Consensus 65 rl~lwaae~nrl~e--V~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN 142 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTE--VQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNN 142 (228)
T ss_pred HHHHHHHhhccHHH--HHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccc
Confidence 34788999999884 555555 44689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHh-hhhhcccc
Q 003477 515 EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD-GLAAFLSE-QALVAQFN 570 (816)
Q Consensus 515 ~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~-~iv~lLle-~Ga~~~l~ 570 (816)
.+++.+||++|||+|+ ......||||+|+.+.+. ..+.+|+- .+..+.++
T Consensus 143 ~~va~~LLqhgaDVnA------~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~ 194 (228)
T KOG0512|consen 143 FEVAGRLLQHGADVNA------QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLK 194 (228)
T ss_pred hhHHHHHHhccCcccc------cccccchhhHHhhcccchHHHHHHHhhccccChhhh
Confidence 9999999999999999 567789999999987654 44555543 34554443
No 44
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.64 E-value=4.9e-16 Score=164.56 Aligned_cols=128 Identities=22% Similarity=0.237 Sum_probs=110.4
Q ss_pred CCCCccCcHHHHHHHc---CCcHHHHHHHHHcCCCCCcc-CcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcH
Q 003477 430 TSLPEAKDSFFELTLK---SKLKEWLLERVVEGSKTTEY-DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTA 505 (816)
Q Consensus 430 ~~~~~g~t~L~~Aa~~---~~l~~~lv~~Ll~ga~in~~-d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~Tp 505 (816)
-.+..|.||++.+++. ...+.-+++.|-.-+|+|.+ ...|+|+|++|+..|..++|+.||.+|+|||.+|.+|-|+
T Consensus 297 ~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTA 376 (452)
T KOG0514|consen 297 QQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTA 376 (452)
T ss_pred ccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHH
Confidence 3356699999988763 22222267777777789985 4589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhh
Q 003477 506 LHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 563 (816)
Q Consensus 506 Lh~Aa~~G~~eiV~lLL~-~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 563 (816)
|++||.+||.+||++||. -++|+.+ .|.+|.|+|.+|...||.+|+-+|..+
T Consensus 377 LMCA~EHGhkEivklLLA~p~cd~sL------tD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 377 LMCAAEHGHKEIVKLLLAVPSCDISL------TDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred HhhhhhhChHHHHHHHhccCccccee------ecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 999999999999999996 4677777 899999999999999999999999765
No 45
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.63 E-value=3.2e-16 Score=156.09 Aligned_cols=130 Identities=18% Similarity=0.061 Sum_probs=116.6
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHcCCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHc
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 512 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~ 512 (816)
-.+.+++.+++.+.++.. . .++....+|.+|+.|.|||.||+.+|+.++|++||..|++++...+...|+|.+|+..
T Consensus 127 ~~p~s~~slsVhql~L~~--~-~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~g 203 (296)
T KOG0502|consen 127 LMPWSPLSLSVHQLHLDV--V-DLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRG 203 (296)
T ss_pred cccCChhhHHHHHHHHHH--H-HHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcC
Confidence 347788888888776652 2 2223778999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccC
Q 003477 513 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 513 G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 571 (816)
|..+||++||..+.|+|. -|.+|.|||-+|+..||.+|++.|++.||+....+
T Consensus 204 gytdiV~lLL~r~vdVNv------yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~ 256 (296)
T KOG0502|consen 204 GYTDIVELLLTREVDVNV------YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQED 256 (296)
T ss_pred ChHHHHHHHHhcCCCcce------eccCCCceeeeeecCChHHHHHHHHhcCCCccccc
Confidence 999999999999999999 89999999999999999999999999999985543
No 46
>PHA02917 ankyrin-like protein; Provisional
Probab=99.63 E-value=3.6e-15 Score=178.06 Aligned_cols=124 Identities=22% Similarity=0.190 Sum_probs=106.7
Q ss_pred CcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHH--HcCChhhHHHHHhCCCCCccccC---CC-------
Q 003477 436 KDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCA--MLGYTWAILLFSWSGLSLDFRDK---YG------- 502 (816)
Q Consensus 436 ~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa--~~G~~~iv~~LL~~Gadin~~D~---~G------- 502 (816)
..+++.|+..++.+ ++++|++ |+++|..|..|+||||.|+ ..|+.+++++|+++|+++|.+|. .|
T Consensus 104 ~~~~~~a~~~~~~e--~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~ 181 (661)
T PHA02917 104 NIFSYMKSKNVDVD--LIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQ 181 (661)
T ss_pred chHHHHHhhcCCHH--HHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccc
Confidence 35566677777777 8898888 9999999999999999654 46899999999999999987654 34
Q ss_pred ----CcHHHHHHH-----------cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCH--HHHHHHHhhhh
Q 003477 503 ----WTALHWAAY-----------YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD--GLAAFLSEQAL 565 (816)
Q Consensus 503 ----~TpLh~Aa~-----------~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~--~iv~lLle~Ga 565 (816)
.||||+|+. +|+.++|++|+++||+++. +|.+|.||||+|+.+|+. +++++|++ |+
T Consensus 182 ~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~------~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~ 254 (661)
T PHA02917 182 PRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS------IDKNYCTALQYYIKSSHIDIDIVKLLMK-GI 254 (661)
T ss_pred ccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc------CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CC
Confidence 599999986 5689999999999999999 899999999999999995 79999985 77
Q ss_pred hcc
Q 003477 566 VAQ 568 (816)
Q Consensus 566 ~~~ 568 (816)
+..
T Consensus 255 d~~ 257 (661)
T PHA02917 255 DNT 257 (661)
T ss_pred ccc
Confidence 653
No 47
>PHA02917 ankyrin-like protein; Provisional
Probab=99.63 E-value=1.9e-15 Score=180.52 Aligned_cols=151 Identities=9% Similarity=-0.050 Sum_probs=114.4
Q ss_pred HHHHHHhhCCCCCCCCccCcHHHHHHHcCCcH--HHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCC
Q 003477 418 WAYLFKSVGDKRTSLPEAKDSFFELTLKSKLK--EWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS 494 (816)
Q Consensus 418 ~~~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~--~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gad 494 (816)
...++..+.+.+.....|.||||.|+..|+.. ..+++.|++ +...|..|. .+++|+|+..|+.++|++|+++|++
T Consensus 51 v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gad 128 (661)
T PHA02917 51 VKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEHGFD 128 (661)
T ss_pred HHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHcCCC
Confidence 34444445555555667889999999888743 224566665 443444332 3677888888899999999999999
Q ss_pred CccccCCCCcHHHHHH--HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCC-----------CCHHHHHHH-----------
Q 003477 495 LDFRDKYGWTALHWAA--YYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-----------LNAADIASK----------- 550 (816)
Q Consensus 495 in~~D~~G~TpLh~Aa--~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G-----------~TpL~lA~~----------- 550 (816)
+|.+|.+|+||||+|+ ..|+.++|++|+++||+++..+. .+..| .||||+|+.
T Consensus 129 in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~---~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~ 205 (661)
T PHA02917 129 LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE---DDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRA 205 (661)
T ss_pred CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc---ccccccccccccccccccHHHHHHhhcccccccccc
Confidence 9999999999999654 57899999999999999986211 22233 699999986
Q ss_pred cCCHHHHHHHHhhhhhccccCcc
Q 003477 551 KGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 551 ~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
+++.+++++|+++|++.+..+-.
T Consensus 206 ~~~~eiv~~Li~~Gadvn~~d~~ 228 (661)
T PHA02917 206 YVRPEVVKCLINHGIKPSSIDKN 228 (661)
T ss_pred cCcHHHHHHHHHCCCCcccCCCC
Confidence 56899999999999999876543
No 48
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.63 E-value=6.4e-16 Score=158.89 Aligned_cols=133 Identities=18% Similarity=0.252 Sum_probs=115.7
Q ss_pred CCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcH
Q 003477 427 DKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTA 505 (816)
Q Consensus 427 ~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~Tp 505 (816)
+.+...+.|..|||+||..|+.. +++.|+. |+.+|..+....||||+||..|+.++|..||+..+|+|+.+..|.||
T Consensus 26 dln~gddhgfsplhwaakegh~a--ivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntp 103 (448)
T KOG0195|consen 26 DLNVGDDHGFSPLHWAAKEGHVA--IVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTP 103 (448)
T ss_pred ccccccccCcchhhhhhhcccHH--HHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCc
Confidence 34555678999999999999988 8898888 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhc
Q 003477 506 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 567 (816)
Q Consensus 506 Lh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~ 567 (816)
|||||..|...+++-|+.+||.+++ .|+.|.|||+.|.-.-..-+.+.--++|-.+
T Consensus 104 lhyacfwgydqiaedli~~ga~v~i------cnk~g~tpldkakp~l~~~l~e~aek~gq~~ 159 (448)
T KOG0195|consen 104 LHYACFWGYDQIAEDLISCGAAVNI------CNKKGMTPLDKAKPMLKNTLLEIAEKHGQSP 159 (448)
T ss_pred hhhhhhhcHHHHHHHHHhccceeee------cccCCCCchhhhchHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998 8999999999886533333333334455443
No 49
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.62 E-value=2.2e-15 Score=133.59 Aligned_cols=89 Identities=28% Similarity=0.343 Sum_probs=72.1
Q ss_pred HHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 003477 473 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 552 (816)
Q Consensus 473 LHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G 552 (816)
||+|+..|+.+++++|++.|.+++. |.||||+||..|+.+++++|+++|++++. +|..|.||||+|+.+|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINS------QDKNGNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-------BSTTSSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc------cCCCCCCHHHHHHHcC
Confidence 6888888888888888888887776 77888888888888888888888888887 7788888888888888
Q ss_pred CHHHHHHHHhhhhhccccC
Q 003477 553 FDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 553 ~~~iv~lLle~Ga~~~l~~ 571 (816)
+.+++++|+++|++.+.+|
T Consensus 71 ~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 71 NLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHHHHTTT-TTSS-
T ss_pred CHHHHHHHHHcCCCCCCcC
Confidence 8888888888888776543
No 50
>PHA02730 ankyrin-like protein; Provisional
Probab=99.61 E-value=3.9e-15 Score=174.59 Aligned_cols=138 Identities=13% Similarity=0.059 Sum_probs=113.5
Q ss_pred HHHhhCCCCCCCCccCcHHHHHHHcCC----cHHHHHHHHHc-CC--CCCccCcCCCchHHH---HHHcC---------C
Q 003477 421 LFKSVGDKRTSLPEAKDSFFELTLKSK----LKEWLLERVVE-GS--KTTEYDVHGQGVIHL---CAMLG---------Y 481 (816)
Q Consensus 421 li~~l~~~~~~~~~g~t~L~~Aa~~~~----l~~~lv~~Ll~-ga--~in~~d~~G~TpLHl---Aa~~G---------~ 481 (816)
|+..+.+.+.. ..|.||||.|+..++ .+ ++++|++ |+ ++|..|..|.||||. |...+ .
T Consensus 365 LIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~e--IvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~ 441 (672)
T PHA02730 365 MLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVN--VVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETIL 441 (672)
T ss_pred HHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHH--HHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhH
Confidence 33334555544 679999999988875 34 8888887 76 688899999999984 33232 1
Q ss_pred hhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCC-CCCCHHHHHHH--cCCHHHHH
Q 003477 482 TWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASK--KGFDGLAA 558 (816)
Q Consensus 482 ~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~-~G~TpL~lA~~--~G~~~iv~ 558 (816)
.+++++|+.+|+++|.+|..|+||||+|+..++.+++++|+++||+++. +|. .|.||||+|+. .|+.++++
T Consensus 442 ~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~------~d~~~g~TaL~~Aa~~~~~~~eIv~ 515 (672)
T PHA02730 442 IDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT------TSRSIINTAIQKSSYRRENKTKLVD 515 (672)
T ss_pred HHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCcCCcCHHHHHHHhhcCcHHHHH
Confidence 2468999999999999999999999999999999999999999999998 775 59999999987 47999999
Q ss_pred HHHhhhhhc
Q 003477 559 FLSEQALVA 567 (816)
Q Consensus 559 lLle~Ga~~ 567 (816)
+|+++|++.
T Consensus 516 ~LLs~ga~i 524 (672)
T PHA02730 516 LLLSYHPTL 524 (672)
T ss_pred HHHHcCCCH
Confidence 999999765
No 51
>PHA02795 ankyrin-like protein; Provisional
Probab=99.61 E-value=4.2e-15 Score=167.01 Aligned_cols=132 Identities=10% Similarity=-0.016 Sum_probs=117.0
Q ss_pred CCccCcHHHHHHH--cCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCc-cc-----cCCC
Q 003477 432 LPEAKDSFFELTL--KSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD-FR-----DKYG 502 (816)
Q Consensus 432 ~~~g~t~L~~Aa~--~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin-~~-----D~~G 502 (816)
...++|+||.++. .|+.+ ++++|++ |++++.. ++.||||.|+..|+.+++++|+++|++.+ .. +..|
T Consensus 113 ~~~~~~~L~~~~~n~~n~~e--iV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~ 188 (437)
T PHA02795 113 CNSVQDLLLYYLSNAYVEID--IVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQ 188 (437)
T ss_pred cccccHHHHHHHHhcCCCHH--HHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhc
Confidence 4568999999999 66666 8999988 9999984 45899999999999999999999998543 22 2358
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcc
Q 003477 503 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 503 ~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
.||+|.|+..++.+++++|+++||++|. +|..|.||||+|+..|+.+++++|+++|++.+..+..
T Consensus 189 ~t~l~~a~~~~~~eIve~LIs~GADIN~------kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~ 253 (437)
T PHA02795 189 YTRGFLVDEPTVLEIYKLCIPYIEDINQ------LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSN 253 (437)
T ss_pred cchhHHHHhcCHHHHHHHHHhCcCCcCc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 8999999999999999999999999999 8999999999999999999999999999999877654
No 52
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.61 E-value=9.3e-16 Score=162.50 Aligned_cols=135 Identities=19% Similarity=0.223 Sum_probs=116.4
Q ss_pred CCCCCccCcHHHHHHHcCCcHHHHHHHHHc--CCCCCccCcCCCchHHHHHHc-----CChhhHHHHHhCCCCCccccC-
Q 003477 429 RTSLPEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAML-----GYTWAILLFSWSGLSLDFRDK- 500 (816)
Q Consensus 429 ~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~--ga~in~~d~~G~TpLHlAa~~-----G~~~iv~~LL~~Gadin~~D~- 500 (816)
++...+|.|+||+++...++. +++.|+. -+++|..|.-|.||+++|+.. ....+|.-|...| |||++-.
T Consensus 262 NlaDsNGNTALHYsVSHaNF~--VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ 338 (452)
T KOG0514|consen 262 NLADSNGNTALHYAVSHANFD--VVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQ 338 (452)
T ss_pred hhhcCCCCeeeeeeecccchH--HHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhh
Confidence 444567999999999999999 7888887 579999999999999998864 2456788888765 7888765
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhh-hhhccccCc
Q 003477 501 YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ-ALVAQFNDM 572 (816)
Q Consensus 501 ~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~-Ga~~~l~~l 572 (816)
.|.|+|++|+.+|+.++|+.||.+|||+|+ +|.+|.|+|++|+..||++|+++||.. +.+..+.+.
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdVNi------QDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~ 405 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADVNI------QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDV 405 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCCcc------ccCCccHHHhhhhhhChHHHHHHHhccCcccceeecC
Confidence 699999999999999999999999999999 999999999999999999999999976 444444444
No 53
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.58 E-value=3.8e-15 Score=165.37 Aligned_cols=146 Identities=21% Similarity=0.235 Sum_probs=127.0
Q ss_pred HHHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccc
Q 003477 420 YLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR 498 (816)
Q Consensus 420 ~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~ 498 (816)
.++....+.+....+|.|+||.+|+..+.. ++.+|++ |+++|..|..|+||||.|+..||..++++|+.+|+++...
T Consensus 58 ~ll~~ga~~~~~n~DglTalhq~~id~~~e--~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~av 135 (527)
T KOG0505|consen 58 KLLNRGASPNLCNVDGLTALHQACIDDNLE--MVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAV 135 (527)
T ss_pred HHhccCCCccccCCccchhHHHHHhcccHH--HHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhc
Confidence 333334445666788999999999999988 7888888 9999999999999999999999999999999987653221
Q ss_pred -----------------------------------------------------------cCCCCcHHHHHHHcCCHHHHH
Q 003477 499 -----------------------------------------------------------DKYGWTALHWAAYYGREKMVV 519 (816)
Q Consensus 499 -----------------------------------------------------------D~~G~TpLh~Aa~~G~~eiV~ 519 (816)
+..|-|+||.|+..|..++.+
T Consensus 136 Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~ 215 (527)
T KOG0505|consen 136 NSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAA 215 (527)
T ss_pred cCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHH
Confidence 345899999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcc
Q 003477 520 DLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 520 lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
+|+.+|.++++ +|.+|+||||.|+..|+.+++++|+++|++.+.....
T Consensus 216 lLl~ag~~~~~------~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~ 263 (527)
T KOG0505|consen 216 LLLQAGYSVNI------KDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKM 263 (527)
T ss_pred HHHHhccCccc------ccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhc
Confidence 99999999999 9999999999999999999999999999887655443
No 54
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.57 E-value=1e-14 Score=129.32 Aligned_cols=86 Identities=30% Similarity=0.392 Sum_probs=79.3
Q ss_pred HHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHH
Q 003477 439 FFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 517 (816)
Q Consensus 439 L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~ei 517 (816)
||.|+..++.. +++.|++ +.+++. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 1 L~~A~~~~~~~--~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLE--ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHH--HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHH--HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence 78999999998 7888888 877776 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCC
Q 003477 518 VVDLLSAGAKPNL 530 (816)
Q Consensus 518 V~lLL~~GAd~n~ 530 (816)
+++|+++|++++.
T Consensus 75 ~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 75 VKLLLEHGADVNI 87 (89)
T ss_dssp HHHHHHTTT-TTS
T ss_pred HHHHHHcCCCCCC
Confidence 9999999999987
No 55
>PHA02741 hypothetical protein; Provisional
Probab=99.57 E-value=9.6e-15 Score=145.93 Aligned_cols=105 Identities=24% Similarity=0.261 Sum_probs=93.9
Q ss_pred CCccCcCCCchHHHHHHcCChhhHHHHHh------CCCCCccccCCCCcHHHHHHHcCC----HHHHHHHHhcCCCCCCC
Q 003477 462 TTEYDVHGQGVIHLCAMLGYTWAILLFSW------SGLSLDFRDKYGWTALHWAAYYGR----EKMVVDLLSAGAKPNLV 531 (816)
Q Consensus 462 in~~d~~G~TpLHlAa~~G~~~iv~~LL~------~Gadin~~D~~G~TpLh~Aa~~G~----~eiV~lLL~~GAd~n~~ 531 (816)
++..|..|.||||+||..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|+.+|++++.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~- 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA- 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-
Confidence 45678899999999999999999998853 478999999999999999999999 5899999999999998
Q ss_pred CCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHh-hhhhccccCc
Q 003477 532 TDPTSQNP-GGLNAADIASKKGFDGLAAFLSE-QALVAQFNDM 572 (816)
Q Consensus 532 td~~~~d~-~G~TpL~lA~~~G~~~iv~lLle-~Ga~~~l~~l 572 (816)
++. .|.||||+|+..++.+++++|++ .|++.+..+.
T Consensus 93 -----~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~ 130 (169)
T PHA02741 93 -----QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA 130 (169)
T ss_pred -----CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence 775 89999999999999999999998 5888766553
No 56
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.53 E-value=4.4e-14 Score=140.83 Aligned_cols=100 Identities=16% Similarity=0.095 Sum_probs=90.0
Q ss_pred CCCccCcHHHHHHHcCCcHH-HHHHHHHc-CCCCCccC-cCCCchHHHHHHcCChhhHHHHHh-CCCCCccccCCCCcHH
Q 003477 431 SLPEAKDSFFELTLKSKLKE-WLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTAL 506 (816)
Q Consensus 431 ~~~~g~t~L~~Aa~~~~l~~-~lv~~Ll~-ga~in~~d-~~G~TpLHlAa~~G~~~iv~~LL~-~Gadin~~D~~G~TpL 506 (816)
....|+||||+|+..+.... .++++|++ |+++|.+| ..|.||||+|+..|+.+++++|+. .|++++.+|..|+|||
T Consensus 53 ~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL 132 (166)
T PHA02743 53 YDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAY 132 (166)
T ss_pred cCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHH
Confidence 34679999999999887542 13677777 99999998 589999999999999999999995 8999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCCC
Q 003477 507 HWAAYYGREKMVVDLLSAGAKPNL 530 (816)
Q Consensus 507 h~Aa~~G~~eiV~lLL~~GAd~n~ 530 (816)
|+|+..|+.+++++|+.+|++++.
T Consensus 133 ~~A~~~~~~~iv~~Ll~~ga~~~~ 156 (166)
T PHA02743 133 HIAYKMRDRRMMEILRANGAVCDD 156 (166)
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999999998
No 57
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.53 E-value=5.3e-15 Score=152.22 Aligned_cols=127 Identities=21% Similarity=0.175 Sum_probs=111.3
Q ss_pred HHHHHHcCCcHHHHHHHHH-c-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHH
Q 003477 439 FFELTLKSKLKEWLLERVV-E-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 516 (816)
Q Consensus 439 L~~Aa~~~~l~~~lv~~Ll-~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~e 516 (816)
++.-|.+|+-.+ +.+-+ + ..|.|.-|..|.+||||||..|+..+++.||.+|+.+|..+....||||+|+.+||.+
T Consensus 4 if~wcregna~q--vrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrd 81 (448)
T KOG0195|consen 4 IFGWCREGNAFQ--VRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRD 81 (448)
T ss_pred hhhhhhcCCeEE--EEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHH
Confidence 344566666432 22222 2 5678889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcc
Q 003477 517 MVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 517 iV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
+|..||+..+|+|+ .|..|.||||+||..|+..|++-|+..|+..++.+..
T Consensus 82 ivqkll~~kadvna------vnehgntplhyacfwgydqiaedli~~ga~v~icnk~ 132 (448)
T KOG0195|consen 82 IVQKLLSRKADVNA------VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKK 132 (448)
T ss_pred HHHHHHHHhcccch------hhccCCCchhhhhhhcHHHHHHHHHhccceeeecccC
Confidence 99999999999999 8899999999999999999999999999988776644
No 58
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.53 E-value=1.7e-13 Score=126.32 Aligned_cols=121 Identities=26% Similarity=0.344 Sum_probs=112.6
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 511 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~ 511 (816)
..|.|+|+.|+..++.. +++.|++ +.+.+..+..|.||||.|+..+..+++++|+..|++++..+..|.||+|+|+.
T Consensus 5 ~~g~t~l~~a~~~~~~~--~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 5 EDGRTPLHLAASNGHLE--VVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred cCCCCHHHHHHHcCcHH--HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 56899999999999986 6777777 88888999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003477 512 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 561 (816)
Q Consensus 512 ~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl 561 (816)
.++.+++++|+..|.+++. .|..|.||+++|...++.+++++|+
T Consensus 83 ~~~~~~~~~L~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 83 NGNLDVVKLLLKHGADVNA------RDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCcHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999999999999988887 8899999999999999999999884
No 59
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.52 E-value=6.8e-14 Score=172.29 Aligned_cols=123 Identities=17% Similarity=0.140 Sum_probs=105.6
Q ss_pred HHHHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCcc
Q 003477 419 AYLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF 497 (816)
Q Consensus 419 ~~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~ 497 (816)
..++....+.+....+|.||||.|+..|+.. +++.|++ ++..+ ...|.++||+||..|+.++++.|+++|+++|.
T Consensus 575 ~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~--iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~ 650 (823)
T PLN03192 575 LVLLKHACNVHIRDANGNTALWNAISAKHHK--IFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDS 650 (823)
T ss_pred HHHHhcCCCCCCcCCCCCCHHHHHHHhCCHH--HHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCC
Confidence 3444444556666778999999999999988 7888888 44433 34677999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCC-CCHHHHHHHc
Q 003477 498 RDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKK 551 (816)
Q Consensus 498 ~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G-~TpL~lA~~~ 551 (816)
+|.+|+||||+|+..|+.+++++|+++||+++. .|..| .||++++...
T Consensus 651 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~------~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 651 EDHQGATALQVAMAEDHVDMVRLLIMNGADVDK------ANTDDDFSPTELRELL 699 (823)
T ss_pred CCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999998 77777 9999887554
No 60
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.51 E-value=2.9e-14 Score=174.03 Aligned_cols=132 Identities=19% Similarity=0.137 Sum_probs=111.3
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccC--------------cCCCchHHHHHHcCChhhHHHHHhCCCCCc
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD--------------VHGQGVIHLCAMLGYTWAILLFSWSGLSLD 496 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d--------------~~G~TpLHlAa~~G~~~iv~~LL~~Gadin 496 (816)
...|.||||.|+..|+.+ ++++|++ |++++..+ ..|.||||+|+..|+.+++++|+++|+|+|
T Consensus 125 ~~~G~TpLhlAa~~~~~e--iVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin 202 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYE--IVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADIL 202 (743)
T ss_pred cCCCCcHHHHHHHhCCHH--HHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchh
Confidence 356999999999999998 8999888 99998643 369999999999999999999999999999
Q ss_pred cccCCCCcHHHHHHHcC---------CHHHHHHHHhcCCCCCCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhh
Q 003477 497 FRDKYGWTALHWAAYYG---------REKMVVDLLSAGAKPNLVT-DPTSQNPGGLNAADIASKKGFDGLAAFLSEQAL 565 (816)
Q Consensus 497 ~~D~~G~TpLh~Aa~~G---------~~eiV~lLL~~GAd~n~~t-d~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga 565 (816)
.+|..|+||||+|+..+ ...+.++++..++...... -....|.+|.||||+|+..|+.+++++|++.+.
T Consensus 203 ~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~ 281 (743)
T TIGR00870 203 TADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKY 281 (743)
T ss_pred hHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHH
Confidence 99999999999999987 3456677777766653200 002378999999999999999999999998653
No 61
>PHA02730 ankyrin-like protein; Provisional
Probab=99.51 E-value=8.7e-14 Score=163.33 Aligned_cols=134 Identities=10% Similarity=-0.011 Sum_probs=115.7
Q ss_pred CCCccCcHHHHHHHcCC---cHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcC--ChhhHHHHHhCCC--CCccccCCC
Q 003477 431 SLPEAKDSFFELTLKSK---LKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGL--SLDFRDKYG 502 (816)
Q Consensus 431 ~~~~g~t~L~~Aa~~~~---l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G--~~~iv~~LL~~Ga--din~~D~~G 502 (816)
....|.||||+|+..++ .+ ++++|++ |++++.+|..|.||||+|+..| +.++|++|+++|+ +++..|.-+
T Consensus 37 kd~~G~TaLh~A~~~~~~~~~e--ivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~ 114 (672)
T PHA02730 37 IDRRGNNALHCYVSNKCDTDIK--IVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIN 114 (672)
T ss_pred cCCCCCcHHHHHHHcCCcCcHH--HHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccC
Confidence 34569999999999874 44 8888888 9999999999999999999977 7999999999965 558888889
Q ss_pred CcHHHHHHH--cCCHHHHHHHHh-cCCCCCCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhhhhhcc
Q 003477 503 WTALHWAAY--YGREKMVVDLLS-AGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQ 568 (816)
Q Consensus 503 ~TpLh~Aa~--~G~~eiV~lLL~-~GAd~n~~td~~~~d-~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~ 568 (816)
++|||.++. .++.++|++|+. .|++++... +.++ ..|.+|+++|...++.+++++|+++|++..
T Consensus 115 d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~--~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~ 182 (672)
T PHA02730 115 DFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNT--NYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYST 182 (672)
T ss_pred CchHHHHHHhcCCcHHHHHHHHHhcCCChhhhh--hhhccccchhhhhHhcCCCchHHHHHHHHcCCccc
Confidence 999999999 899999999996 778988621 0112 389999999999999999999999999984
No 62
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.49 E-value=1e-13 Score=150.05 Aligned_cols=107 Identities=12% Similarity=-0.023 Sum_probs=93.6
Q ss_pred CCccCcCCCch-HHHHHHcCChhhHHHHHhCCCCCcccc----CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC
Q 003477 462 TTEYDVHGQGV-IHLCAMLGYTWAILLFSWSGLSLDFRD----KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTS 536 (816)
Q Consensus 462 in~~d~~G~Tp-LHlAa~~G~~~iv~~LL~~Gadin~~D----~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~ 536 (816)
+..+|..|.|+ ||.|+..|+.+++++|+++|+++|.+| ..|.||||+|+..|+.+++++|+++||+++.
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~------ 98 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR------ 98 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc------
Confidence 34567788775 555666689999999999999999984 5899999999999999999999999999997
Q ss_pred C-CCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCccc
Q 003477 537 Q-NPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 574 (816)
Q Consensus 537 ~-d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~l 574 (816)
+ +..|.||||+|+..|+.+++++|+++|++.+..+...
T Consensus 99 ~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G 137 (300)
T PHA02884 99 YAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDM 137 (300)
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 5 3579999999999999999999999999988766543
No 63
>PHA02792 ankyrin-like protein; Provisional
Probab=99.49 E-value=1.2e-13 Score=160.71 Aligned_cols=141 Identities=15% Similarity=0.085 Sum_probs=113.4
Q ss_pred HHHHHhhCCCCCCC--CccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCC--CchHHHHHHcCChh---hHHHHHh
Q 003477 419 AYLFKSVGDKRTSL--PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG--QGVIHLCAMLGYTW---AILLFSW 490 (816)
Q Consensus 419 ~~li~~l~~~~~~~--~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G--~TpLHlAa~~G~~~---iv~~LL~ 490 (816)
.++++.+-+.+... ....+.++.|+..++.+ ++++|++ |+++|..|..| .||||+|+..+... ++++|++
T Consensus 321 ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~e--IVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs 398 (631)
T PHA02792 321 INVIKCMIDEGATLYRFKHINKYFQKFDNRDPK--VVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKP 398 (631)
T ss_pred HHHHHHHHHCCCccccCCcchHHHHHHHcCCHH--HHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHh
Confidence 34444443334332 23566789998899888 8999988 99999988775 69999987765543 5788999
Q ss_pred CCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHH---cC-------CHHHHHHH
Q 003477 491 SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK---KG-------FDGLAAFL 560 (816)
Q Consensus 491 ~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~---~G-------~~~iv~lL 560 (816)
+|+++|.+|..|+||||+|+..|+.+++++|+++|++++. +|..|.|||++|+. .+ +.+++++|
T Consensus 399 ~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~------kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lL 472 (631)
T PHA02792 399 YIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI------TTKYGSTCIGICVILAHACIPEIAELYIKILEII 472 (631)
T ss_pred cCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 89999999999976 22 24567777
Q ss_pred Hhhhhhc
Q 003477 561 SEQALVA 567 (816)
Q Consensus 561 le~Ga~~ 567 (816)
+++|.+.
T Consensus 473 Ls~~p~i 479 (631)
T PHA02792 473 LSKLPTI 479 (631)
T ss_pred HhcCCCh
Confidence 7777554
No 64
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.49 E-value=5.6e-14 Score=156.20 Aligned_cols=140 Identities=22% Similarity=0.350 Sum_probs=125.9
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCH
Q 003477 437 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 515 (816)
Q Consensus 437 t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~ 515 (816)
-.++.||..+++.+ +..|+. |+++|..+.+|.|+||-||.-.+.+||++|+++|++||..|..||||||-|+.+||.
T Consensus 42 a~~l~A~~~~d~~e--v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~ 119 (527)
T KOG0505|consen 42 AVFLEACSRGDLEE--VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYL 119 (527)
T ss_pred HHHHhccccccHHH--HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccH
Confidence 34788889999886 555555 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCC-----------------------------------------------------CCCCCCCCCC
Q 003477 516 KMVVDLLSAGAKPNLVT-----------------------------------------------------DPTSQNPGGL 542 (816)
Q Consensus 516 eiV~lLL~~GAd~n~~t-----------------------------------------------------d~~~~d~~G~ 542 (816)
.++.+|+.+||+..+++ +++..+..|.
T Consensus 120 ~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~ 199 (527)
T KOG0505|consen 120 NIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGA 199 (527)
T ss_pred HHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccc
Confidence 99999999999877763 2666777799
Q ss_pred CHHHHHHHcCCHHHHHHHHhhhhhccccCccccccc
Q 003477 543 NAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNI 578 (816)
Q Consensus 543 TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~l~~~i 578 (816)
|+||+|+.+|+.+++++|+.+|.+.++++..-.+++
T Consensus 200 T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPl 235 (527)
T KOG0505|consen 200 TALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPL 235 (527)
T ss_pred hHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcc
Confidence 999999999999999999999999999988766643
No 65
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.47 E-value=3e-13 Score=137.50 Aligned_cols=125 Identities=30% Similarity=0.405 Sum_probs=115.0
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCC-----hhhHHHHHhCCC---CCccccCCC
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-----TWAILLFSWSGL---SLDFRDKYG 502 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~-----~~iv~~LL~~Ga---din~~D~~G 502 (816)
...+.++++.++..++.. .+..++. |.+++..|..|.||||+|+..|+ .+++++|++.|+ +.+.+|..|
T Consensus 70 ~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g 147 (235)
T COG0666 70 DLDGRLPLHSAASKGDDK--IVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG 147 (235)
T ss_pred CccccCHHHHHHHcCcHH--HHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence 344789999999999887 5555666 99999999999999999999999 999999999999 566679999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhh
Q 003477 503 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 564 (816)
Q Consensus 503 ~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 564 (816)
+||||+|+..|+.+++++|++.|++++. .+..|.||+++|+..++..++..|++.+
T Consensus 148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 148 NTPLHWAALNGDADIVELLLEAGADPNS------RNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CchhHHHHHcCchHHHHHHHhcCCCCcc------cccCCCcchhhhcccchHHHHHHHHhcC
Confidence 9999999999999999999999999998 8899999999999999999999999987
No 66
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.46 E-value=9.5e-14 Score=158.84 Aligned_cols=126 Identities=20% Similarity=0.176 Sum_probs=119.0
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 511 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~ 511 (816)
.+|.|.||+||++|+.. ++.+|++ .+-++.+|..|.+|||+||+.|+.+++++|+.++..+|.....|.||||.|+.
T Consensus 47 ~~gfTalhha~Lng~~~--is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaq 124 (854)
T KOG0507|consen 47 YSGFTLLHHAVLNGQNQ--ISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQ 124 (854)
T ss_pred ccchhHHHHHHhcCchH--HHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhh
Confidence 36999999999999998 7888888 88888899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhh
Q 003477 512 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 566 (816)
Q Consensus 512 ~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~ 566 (816)
+||.+++.+||.+|+|+-+ +|+.+.|+|++|+..|..+++++|+.....
T Consensus 125 hgh~dvv~~Ll~~~adp~i------~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~ 173 (854)
T KOG0507|consen 125 HGHLEVVFYLLKKNADPFI------RNNSKETVLDLASRFGRAEVVQMLLQKKFP 173 (854)
T ss_pred hcchHHHHHHHhcCCCccc------cCcccccHHHHHHHhhhhHHHHHHhhhccc
Confidence 9999999999999999988 899999999999999999999999988433
No 67
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.5e-13 Score=151.03 Aligned_cols=118 Identities=21% Similarity=0.304 Sum_probs=105.1
Q ss_pred HHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHH
Q 003477 439 FFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 517 (816)
Q Consensus 439 L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~ei 517 (816)
|+-|++.|.++ ++..++. -.|+...+..|.|+||-|+..||.+||+|||..|++||..|.+||||||+||.++++.+
T Consensus 554 LLDaaLeGEld--lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 554 LLDAALEGELD--LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHhhhhcchHH--HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence 57788999988 7887776 66788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhh
Q 003477 518 VVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS--KKGFDGLAAFLSEQ 563 (816)
Q Consensus 518 V~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~--~~G~~~iv~lLle~ 563 (816)
++.|++.||.+-+. .-.++.||.+-+- ..|+.+|.+||...
T Consensus 632 ckqLVe~GaavfAs-----TlSDmeTa~eKCee~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 632 CKQLVESGAAVFAS-----TLSDMETAAEKCEEMEEGYDQCSQYLYGV 674 (752)
T ss_pred HHHHHhccceEEee-----ecccccchhhhcchhhhhHHHHHHHHHHH
Confidence 99999999998773 3467899998764 55999999999753
No 68
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.44 E-value=2.1e-13 Score=118.96 Aligned_cols=106 Identities=25% Similarity=0.292 Sum_probs=92.8
Q ss_pred cHHHHHHHcCCcHHHHHHHHHcCCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHH
Q 003477 437 DSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 516 (816)
Q Consensus 437 t~L~~Aa~~~~l~~~lv~~Ll~ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~e 516 (816)
..+.++..+|.+.+ +...+.+|-++|..- .|++|||+||-.|...++++|+..|++++.+|+.|-|||--|++.||.+
T Consensus 4 ~~~~W~vkNG~~De-Vk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~ 81 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDE-VKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD 81 (117)
T ss_pred hhHhhhhccCcHHH-HHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence 35678888888887 666666687887654 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 003477 517 MVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 550 (816)
Q Consensus 517 iV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~ 550 (816)
||++||..||+-.. +.++|.+.+..+-.
T Consensus 82 cVklLL~~GAdrt~------~~PdG~~~~eate~ 109 (117)
T KOG4214|consen 82 CVKLLLQNGADRTI------HAPDGTALIEATEE 109 (117)
T ss_pred HHHHHHHcCcccce------eCCCchhHHhhccH
Confidence 99999999999887 77899888776543
No 69
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.44 E-value=2e-13 Score=133.93 Aligned_cols=98 Identities=16% Similarity=0.098 Sum_probs=87.6
Q ss_pred CCccCcHHHHHHHcCCcHH-HHHHHHHc-CCCCCccC-cCCCchHHHHHHcCChhhHHHHHh-CCCCCccccCCCCcHHH
Q 003477 432 LPEAKDSFFELTLKSKLKE-WLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALH 507 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~-~lv~~Ll~-ga~in~~d-~~G~TpLHlAa~~G~~~iv~~LL~-~Gadin~~D~~G~TpLh 507 (816)
...|.||||.|+..++... -+++.|++ |+++|.+| ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||
T Consensus 52 d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~ 131 (154)
T PHA02736 52 NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYY 131 (154)
T ss_pred cCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHH
Confidence 3569999999999987641 14566776 99999998 599999999999999999999998 59999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCC
Q 003477 508 WAAYYGREKMVVDLLSAGAKPN 529 (816)
Q Consensus 508 ~Aa~~G~~eiV~lLL~~GAd~n 529 (816)
+|+..|+.+++++|+.+|++++
T Consensus 132 ~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 132 VACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999876
No 70
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.44 E-value=3.2e-13 Score=130.48 Aligned_cols=124 Identities=19% Similarity=0.155 Sum_probs=105.0
Q ss_pred CCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHH
Q 003477 429 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 507 (816)
Q Consensus 429 ~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh 507 (816)
+....++.||||.|+.+|++. +++.|+. |++++.+...|+||||-||.-.+.+++.+||.+|+|||+.....+||||
T Consensus 91 NtrD~D~YTpLHRAaYn~h~d--iv~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLh 168 (228)
T KOG0512|consen 91 NTRDEDEYTPLHRAAYNGHLD--IVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLH 168 (228)
T ss_pred cccccccccHHHHHHhcCchH--HHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhH
Confidence 445678999999999999998 6776666 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHH-HHHHHH-hcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhh
Q 003477 508 WAAYYGREK-MVVDLL-SAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 563 (816)
Q Consensus 508 ~Aa~~G~~e-iV~lLL-~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 563 (816)
+||.+.+.. .+.+|+ ..+..+.. ++..+.||+++|.+.+ +..+|.+.
T Consensus 169 laa~~rn~r~t~~~Ll~dryi~pg~------~nn~eeta~~iARRT~---~s~~lfe~ 217 (228)
T KOG0512|consen 169 LAAGNRNSRDTLELLLHDRYIHPGL------KNNLEETAFDIARRTS---MSHYLFEI 217 (228)
T ss_pred HhhcccchHHHHHHHhhccccChhh------hcCccchHHHHHHHhh---hhHHHHHH
Confidence 999887654 455555 45667666 8899999999999864 44455443
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=99.42 E-value=6.4e-13 Score=154.65 Aligned_cols=135 Identities=13% Similarity=-0.014 Sum_probs=115.6
Q ss_pred HHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHH-cCChhhHHHHHhCCCCCc---
Q 003477 422 FKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAM-LGYTWAILLFSWSGLSLD--- 496 (816)
Q Consensus 422 i~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~-~G~~~iv~~LL~~Gadin--- 496 (816)
+..+...+....++.++++..|..+...+ +++.|+. |+++|.++..|.||||+|+. .|+.+++++|+++||+++
T Consensus 58 ~~~~~~~~~~n~~~~~~~~~~~s~n~~lE-lvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~ 136 (631)
T PHA02792 58 ILLLSSVDYKNINDFDIFEYLCSDNIDIE-LLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNI 136 (631)
T ss_pred HHHHhCCCcCccCCccHHHHHHHhcccHH-HHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCccccc
Confidence 34455666677788899987776554444 8888888 99999999999999999965 699999999999998732
Q ss_pred ---------------------------------cccCCCCcHHHHHHHcC-------CHHHHHHHHhcCCCCCCCCCCCC
Q 003477 497 ---------------------------------FRDKYGWTALHWAAYYG-------REKMVVDLLSAGAKPNLVTDPTS 536 (816)
Q Consensus 497 ---------------------------------~~D~~G~TpLh~Aa~~G-------~~eiV~lLL~~GAd~n~~td~~~ 536 (816)
..|..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~------ 210 (631)
T PHA02792 137 QYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY------ 210 (631)
T ss_pred ccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc------
Confidence 34567999999999999 89999999999999998
Q ss_pred CCCCCCCHHHHHHHcC--CHHHHHHHHhh
Q 003477 537 QNPGGLNAADIASKKG--FDGLAAFLSEQ 563 (816)
Q Consensus 537 ~d~~G~TpL~lA~~~G--~~~iv~lLle~ 563 (816)
+|..|.||||+|+.+. ..+++++|++.
T Consensus 211 ~d~~g~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 211 YTYREHTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred cCCCCChHHHHHHHcccchHHHHHHHHhc
Confidence 8899999999999999 88999999874
No 72
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.42 E-value=1.5e-13 Score=116.92 Aligned_cols=73 Identities=22% Similarity=0.346 Sum_probs=66.3
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhHHhhhcCcceecCCC-CCCCceeeeeccCCCCc
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HSPGLFLLYMSLDGHKP 342 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pp-h~~G~V~l~v~~~~~~~ 342 (816)
+.|+.++|+||++.||++|+|+|.+|.+ ++.|+||+..+-.++|++.+|+|.+|| |.||.|.+++...+..-
T Consensus 1 P~I~ai~P~eG~~tGGt~VtI~GenF~~-------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~ 73 (85)
T cd01175 1 PCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQF 73 (85)
T ss_pred CcccEecCCCCcccCCeEEEEECCCCCC-------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceee
Confidence 3699999999999999999999987766 699999999988899999999999999 69999999999977654
Q ss_pred c
Q 003477 343 I 343 (816)
Q Consensus 343 ~ 343 (816)
|
T Consensus 74 ~ 74 (85)
T cd01175 74 C 74 (85)
T ss_pred c
Confidence 4
No 73
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.38 E-value=1.1e-12 Score=160.07 Aligned_cols=147 Identities=16% Similarity=0.053 Sum_probs=112.2
Q ss_pred ccCCcHHHHHHhhCCCCCCCCccCcHHHHHHHcC--CcHHHHHHHHHc-CCC------CCc----cCcCCCchHHHHHHc
Q 003477 413 CISNSWAYLFKSVGDKRTSLPEAKDSFFELTLKS--KLKEWLLERVVE-GSK------TTE----YDVHGQGVIHLCAML 479 (816)
Q Consensus 413 ~~~~~~~~li~~l~~~~~~~~~g~t~L~~Aa~~~--~l~~~lv~~Ll~-ga~------in~----~d~~G~TpLHlAa~~ 479 (816)
+..++...+.+.+.+.+.....|.|+||.|+..+ .... ++..+.. +.+ ++. .+..|.||||+||..
T Consensus 60 A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~-ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~ 138 (743)
T TIGR00870 60 AIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEA-ILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHR 138 (743)
T ss_pred HHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHH-HHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHh
Confidence 3445566666666554445667999999988732 2222 4444444 321 111 235699999999999
Q ss_pred CChhhHHHHHhCCCCCcccc--------------CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHH
Q 003477 480 GYTWAILLFSWSGLSLDFRD--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAA 545 (816)
Q Consensus 480 G~~~iv~~LL~~Gadin~~D--------------~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL 545 (816)
|+.++|++|+++|+++|.++ ..|.||||+|+..|+.+++++|+++|+|++. +|..|+|||
T Consensus 139 ~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~------~d~~g~T~L 212 (743)
T TIGR00870 139 QNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT------ADSLGNTLL 212 (743)
T ss_pred CCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh------HhhhhhHHH
Confidence 99999999999999999763 2599999999999999999999999999998 899999999
Q ss_pred HHHHHcC---------CHHHHHHHHhhhhh
Q 003477 546 DIASKKG---------FDGLAAFLSEQALV 566 (816)
Q Consensus 546 ~lA~~~G---------~~~iv~lLle~Ga~ 566 (816)
|+|+..+ ...+.+++++.++.
T Consensus 213 h~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 213 HLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 9999987 33466777777655
No 74
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.38 E-value=1.2e-12 Score=150.08 Aligned_cols=195 Identities=13% Similarity=0.096 Sum_probs=157.6
Q ss_pred CCCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcccccccccCCCCCcCCCCCccccccchhHHHHH
Q 003477 296 SKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQVQ 375 (816)
Q Consensus 296 ~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~s~~~~Fey~~~~l~~~~~~~~d~~~~~~~~l~ 375 (816)
+.+|-+||-|++++.+.++....+.-.|. .-|..||+++.=++ .
T Consensus 51 Talhha~Lng~~~is~llle~ea~ldl~d--~kg~~plhlaaw~g----------------------------------~ 94 (854)
T KOG0507|consen 51 TLLHHAVLNGQNQISKLLLDYEALLDLCD--TKGILPLHLAAWNG----------------------------------N 94 (854)
T ss_pred hHHHHHHhcCchHHHHHHhcchhhhhhhh--ccCcceEEehhhcC----------------------------------c
Confidence 35689999999999999998877766665 66777777776221 1
Q ss_pred HHHHHHHhcCcccccccccCCCCCcHHHHHHHhhhhhccCCcHHHHHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHH
Q 003477 376 MRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLER 455 (816)
Q Consensus 376 ~rla~lL~~~~~~lqil~~~~~~~~l~e~~~~a~~i~~~~~~~~~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~ 455 (816)
.+..+|+.... ...+.....+.+|||.++..++++ ++.+
T Consensus 95 ~e~vkmll~q~---------------------------------------d~~na~~~e~~tplhlaaqhgh~d--vv~~ 133 (854)
T KOG0507|consen 95 LEIVKMLLLQT---------------------------------------DILNAVNIENETPLHLAAQHGHLE--VVFY 133 (854)
T ss_pred chHHHHHHhcc---------------------------------------cCCCcccccCcCccchhhhhcchH--HHHH
Confidence 14444443222 122445567899999999999999 7888
Q ss_pred HHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCC--------CccccCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 003477 456 VVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS--------LDFRDKYGWTALHWAAYYGREKMVVDLLSAGA 526 (816)
Q Consensus 456 Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gad--------in~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GA 526 (816)
|+. |+++-..|..+.|+|-+|+.+|...+|..|+..... -..++..+-+|||.|+.+||.+|++.|+++|.
T Consensus 134 Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~ 213 (854)
T KOG0507|consen 134 LLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGF 213 (854)
T ss_pred HHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCC
Confidence 888 999999999999999999999999999999876322 23456789999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCccc
Q 003477 527 KPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 574 (816)
Q Consensus 527 d~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~l 574 (816)
++|.. ....|+||.|+.+|..+++.+|++.|...+.++.+-
T Consensus 214 din~~-------t~~gtalheaalcgk~evvr~ll~~gin~h~~n~~~ 254 (854)
T KOG0507|consen 214 DINYT-------TEDGTALHEAALCGKAEVVRFLLEIGINTHIKNQHG 254 (854)
T ss_pred Ccccc-------cccchhhhhHhhcCcchhhhHHHhhccccccccccc
Confidence 99973 345699999999999999999999999998887653
No 75
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=99.37 E-value=2.6e-12 Score=152.62 Aligned_cols=312 Identities=17% Similarity=0.132 Sum_probs=180.7
Q ss_pred CCCCccCcCCCchHHHHHHcCChhhHHHHHhC-CCCCccccCCCCcHHHHHHHcCCHHHHHHHH-hcCCCCCCCCCCCCC
Q 003477 460 SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAAYYGREKMVVDLL-SAGAKPNLVTDPTSQ 537 (816)
Q Consensus 460 a~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~-Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL-~~GAd~n~~td~~~~ 537 (816)
.........|+|.||+++..+|.|+++.+++- |-..+..|.+|.--+|+ |..++.+.+.+|+ -.|..++. +
T Consensus 565 ~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i------~ 637 (975)
T KOG0520|consen 565 NLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDI------R 637 (975)
T ss_pred hccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeeccccccc------c
Confidence 34445667899999999999999999999986 76666777777778888 5566667766665 46788887 9
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcccccccccccccccccccccCCCcchhhhhhhhhhHHhhhHHHHH
Q 003477 538 NPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNISGSLQTGSTITVDTQNLTEDEVYLKDTLSAYRTAAEAAA 617 (816)
Q Consensus 538 d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~l~~~is~~~~~~~~~~~~~~~~~~~elslk~sL~a~r~~~~AAi 617 (816)
|..|+||||+|+..|+..++..|++.|++..+..-+..+...|.. ...+...++. +.++.|.... +-.
T Consensus 638 D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~t----a~~la~s~g~-------~gia~~lse~-~L~ 705 (975)
T KOG0520|consen 638 DRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKT----AADLARANGH-------KGIAGYLSEK-ALS 705 (975)
T ss_pred cCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCc----hhhhhhcccc-------cchHHHHhhh-HHH
Confidence 999999999999999999999999999887632111111111111 1111111100 0111111100 000
Q ss_pred HHHHHHhhhhH-------HHHHHHH---------hcC--ChH---HHHHHHHHHHHHHHhhhhHHHHHHHHHHH------
Q 003477 618 RIQAAFREHSL-------KVQTKAI---------RFS--SPE---EEAQNIIAALKIQHAFRNFEVRKKMAAAA------ 670 (816)
Q Consensus 618 ~IQ~~~R~~~~-------R~r~~~~---------~~~--~~~---~~~~~~~Aa~~IQ~~~R~~~~rk~~~aai------ 670 (816)
..-..+....- -...... ... ..+ ...-.-.||.+||.++|....++....++
T Consensus 706 ~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~~~ 785 (975)
T KOG0520|consen 706 AHLSNLELADPNLSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDATKE 785 (975)
T ss_pred HHHhhccccccccCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhcch
Confidence 00000000000 0000000 000 000 12233467888999998877665432111
Q ss_pred -HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh--
Q 003477 671 -RIQHRFRSWKVRKEFL-----NMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEV-- 742 (816)
Q Consensus 671 -~IQa~~Rg~~~Rk~~~-----~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~Rr~r~~r~~~r~lr~~~~~~-- 742 (816)
..+..+-+++.-..|. ..-.++..||..+|||+.|+.|..++..++.||+++|++ ..|+.|+.+-..-.+-
T Consensus 786 ~i~~~~~~~m~~~~a~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~-q~r~dy~ki~wSv~~lek 864 (975)
T KOG0520|consen 786 QISEELAVSMKASSAFSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGY-QVRKDYRKITWSVGVLEK 864 (975)
T ss_pred hhhhhhhhhhhcccchhcCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhch-hHhhhhheechhhhHHHH
Confidence 1122222222222221 112389999999999999999999999999999999999 8888887664332110
Q ss_pred hc---cCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHHH
Q 003477 743 EA---VSDPNHEGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQ--EEYRRMKLAHD 798 (816)
Q Consensus 743 ~~---~~~Q~~~~~~~~~~l~~~Rkq~e~~~~~Av~~IQs~~R~~~aR--~qyrrlk~~~~ 798 (816)
.. -.+| .-++.|+ .++..+++..|.+.||..+|-++.- .-|++|..+..
T Consensus 865 ~~lrwR~k~-----~g~Rgfk--~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~ 918 (975)
T KOG0520|consen 865 LILRWRRKG-----KGFRGFK--GRALFEEQETAATVIEDCYDFYKQLRKQTEERLTRAVV 918 (975)
T ss_pred HHHHHHHhh-----hhhcccc--cccchhccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0001 1111222 1224445666889999999988765 45556544433
No 76
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.37 E-value=2.1e-12 Score=133.37 Aligned_cols=124 Identities=23% Similarity=0.239 Sum_probs=109.7
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHcC-CCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccc-cCCCCcHHHHHH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVEG-SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALHWAA 510 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~g-a~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~-D~~G~TpLh~Aa 510 (816)
+....+|+.+.-+|+... ...|+.+ -++|.+|..|+|+|..|+..|+.++|++||+.|+|+|.. +..++||||+||
T Consensus 10 d~~~~~Lle~i~Kndt~~--a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 10 DAPKSPLLEAIDKNDTEA--ALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred cchhhHHHHHHccCcHHH--HHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHH
Confidence 446679999999999885 3345553 459999999999999999999999999999999999965 557999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhh
Q 003477 511 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 564 (816)
Q Consensus 511 ~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 564 (816)
..|+.++..+|++.|+.+.. .|.-|+|+..+|+.-||.++|..+-.+=
T Consensus 88 LSGn~dvcrllldaGa~~~~------vNsvgrTAaqmAAFVG~H~CV~iINN~~ 135 (396)
T KOG1710|consen 88 LSGNQDVCRLLLDAGARMYL------VNSVGRTAAQMAAFVGHHECVAIINNHI 135 (396)
T ss_pred HcCCchHHHHHHhccCcccc------ccchhhhHHHHHHHhcchHHHHHHhccc
Confidence 99999999999999999998 7899999999999999999998876553
No 77
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.32 E-value=1.3e-11 Score=113.64 Aligned_cols=100 Identities=26% Similarity=0.310 Sum_probs=92.4
Q ss_pred ccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCC
Q 003477 464 EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLN 543 (816)
Q Consensus 464 ~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~T 543 (816)
..|..|.||||.|+..|+.+++++|+..|.+++.+|..|.||||+|+..++.+++++|+..|++++. .+..|.|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~~~~ 75 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA------RDKDGNT 75 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCC
Confidence 3567899999999999999999999999999999999999999999999999999999999998877 7889999
Q ss_pred HHHHHHHcCCHHHHHHHHhhhhhccc
Q 003477 544 AADIASKKGFDGLAAFLSEQALVAQF 569 (816)
Q Consensus 544 pL~lA~~~G~~~iv~lLle~Ga~~~l 569 (816)
|+|+|+..++.+++++|+..|.+...
T Consensus 76 ~l~~a~~~~~~~~~~~L~~~~~~~~~ 101 (126)
T cd00204 76 PLHLAARNGNLDVVKLLLKHGADVNA 101 (126)
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 99999999999999999999844433
No 78
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.31 E-value=1.7e-12 Score=105.72 Aligned_cols=55 Identities=40% Similarity=0.643 Sum_probs=27.2
Q ss_pred HHhCC-CCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003477 488 FSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 548 (816)
Q Consensus 488 LL~~G-adin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA 548 (816)
||++| +++|.+|..|.||||+||..|+.++|++|++.|+++++ +|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------KDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------CcCCCCCHHHhC
Confidence 56666 77777788888888888888888888888877777777 777788888776
No 79
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.30 E-value=7.3e-12 Score=145.48 Aligned_cols=122 Identities=19% Similarity=0.203 Sum_probs=112.0
Q ss_pred ccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCcc---------Cc--------------CCCchHHHHHHcCChhhHHHHH
Q 003477 434 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEY---------DV--------------HGQGVIHLCAMLGYTWAILLFS 489 (816)
Q Consensus 434 ~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~---------d~--------------~G~TpLHlAa~~G~~~iv~~LL 489 (816)
.|.|+||.|..+.+.+ ++.+|++ |||++.+ |. .|..||-+||..+..+++++|+
T Consensus 183 ~GqSaLHiAIv~~~~~--~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAE--LVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred cCcchHHHHHHhccHH--HHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 4899999999999988 8999888 9999852 11 2678999999999999999999
Q ss_pred hCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhh
Q 003477 490 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAK--PNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 563 (816)
Q Consensus 490 ~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd--~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 563 (816)
++|||+|++|.+|+|.||..+.+-..+|..++|++|++ ... +|..|.|||.+|+..|..++.+.+++.
T Consensus 261 ~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v------~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 261 AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV------RNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred hcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc------cccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99999999999999999999999889999999999999 444 899999999999999999999999998
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.27 E-value=1.1e-11 Score=148.88 Aligned_cols=105 Identities=19% Similarity=0.143 Sum_probs=91.1
Q ss_pred cHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCH
Q 003477 437 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 515 (816)
Q Consensus 437 t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~ 515 (816)
..|+.++..|+.. .++.|++ |+++|..|..|.||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 84 ~~L~~aa~~G~~~--~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAV--GARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHH--HHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence 3588899999888 6777777 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc-------CCCCCCCCCCCCCCCCCCCHHHHHH
Q 003477 516 KMVVDLLSA-------GAKPNLVTDPTSQNPGGLNAADIAS 549 (816)
Q Consensus 516 eiV~lLL~~-------GAd~n~~td~~~~d~~G~TpL~lA~ 549 (816)
+++++|+.+ |++++. .+..|.+|+..+.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~~------~~~~g~~~~~~~~ 196 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAKP------DSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHhCCCcccccCCCCCc------cccCCCCccchhh
Confidence 999999988 666665 6777777766554
No 81
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.27 E-value=9.7e-12 Score=108.72 Aligned_cols=92 Identities=21% Similarity=0.146 Sum_probs=85.4
Q ss_pred chHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 003477 471 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 550 (816)
Q Consensus 471 TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~ 550 (816)
--+.|+..+|..+-|+-.+..|.++|..- .|+||||+||-+|..+++++|+..||+++. +|+.|-|||--|+.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~------kDKygITPLLsAvw 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD------KDKYGITPLLSAVW 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC------ccccCCcHHHHHHH
Confidence 34678999999999999999998888664 899999999999999999999999999998 99999999999999
Q ss_pred cCCHHHHHHHHhhhhhccc
Q 003477 551 KGFDGLAAFLSEQALVAQF 569 (816)
Q Consensus 551 ~G~~~iv~lLle~Ga~~~l 569 (816)
.||.++|++|+..||+...
T Consensus 77 EGH~~cVklLL~~GAdrt~ 95 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGADRTI 95 (117)
T ss_pred HhhHHHHHHHHHcCcccce
Confidence 9999999999999998744
No 82
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.26 E-value=8.1e-12 Score=100.69 Aligned_cols=54 Identities=31% Similarity=0.374 Sum_probs=33.6
Q ss_pred CCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHH
Q 003477 469 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLL 522 (816)
Q Consensus 469 G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL 522 (816)
|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 566777777777777777777777777777777777777777777777776664
No 83
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.26 E-value=1.5e-11 Score=147.73 Aligned_cols=96 Identities=26% Similarity=0.316 Sum_probs=89.0
Q ss_pred chHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 003477 471 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 550 (816)
Q Consensus 471 TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~ 550 (816)
+.||.||..|+.+++++|+..|+++|.+|..|+||||+||..|+.+++++|+++|++++. +|..|.||||+|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------~d~~G~TpLh~A~~ 157 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------LDKDGKTPLELAEE 157 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHH
Confidence 458999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred cCCHHHHHHHHhh-------hhhccccCc
Q 003477 551 KGFDGLAAFLSEQ-------ALVAQFNDM 572 (816)
Q Consensus 551 ~G~~~iv~lLle~-------Ga~~~l~~l 572 (816)
+|+.+++++|+++ |++....+.
T Consensus 158 ~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~ 186 (664)
T PTZ00322 158 NGFREVVQLLSRHSQCHFELGANAKPDSF 186 (664)
T ss_pred CCcHHHHHHHHhCCCcccccCCCCCcccc
Confidence 9999999999998 555544443
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.21 E-value=9.5e-12 Score=101.26 Aligned_cols=51 Identities=29% Similarity=0.398 Sum_probs=33.6
Q ss_pred C-CCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHH
Q 003477 459 G-SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 509 (816)
Q Consensus 459 g-a~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~A 509 (816)
| .++|..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|
T Consensus 5 ~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 5 GPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 5 88999999999999999999999999999999999999999999999997
No 85
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.21 E-value=3.2e-11 Score=140.27 Aligned_cols=132 Identities=19% Similarity=0.217 Sum_probs=110.2
Q ss_pred CccCcHHHHHHHcC--CcHHHHHHHHHc--CCCCCc----cCcCCCchHHHHHHcCChhhHHHHHhCCCCCccc------
Q 003477 433 PEAKDSFFELTLKS--KLKEWLLERVVE--GSKTTE----YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------ 498 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~--~l~~~lv~~Ll~--ga~in~----~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~------ 498 (816)
..|.|.||.++.+. ...+ ++..|++ ..-+|. -...|+||||+|..+.+.++|++|++.||||+++
T Consensus 141 a~GET~Lh~~lL~~~~~~n~-la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF 219 (782)
T KOG3676|consen 141 ATGETLLHKALLNLSDGHNE-LARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFF 219 (782)
T ss_pred chhhhHHHHHHhcCchhHHH-HHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcccc
Confidence 56899999999843 3333 5666665 323333 2347999999999999999999999999999976
Q ss_pred ---c--------------CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003477 499 ---D--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 561 (816)
Q Consensus 499 ---D--------------~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl 561 (816)
| ..|..||-+||..++.+|+++|+++|||+++ +|..|+|.||+.+..-..++-.+++
T Consensus 220 ~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~a------qDS~GNTVLH~lVi~~~~~My~~~L 293 (782)
T KOG3676|consen 220 CPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNA------QDSNGNTVLHMLVIHFVTEMYDLAL 293 (782)
T ss_pred CcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCc------cccCCChHHHHHHHHHHHHHHHHHH
Confidence 1 2478999999999999999999999999999 9999999999999998889999999
Q ss_pred hhhhh--ccccC
Q 003477 562 EQALV--AQFND 571 (816)
Q Consensus 562 e~Ga~--~~l~~ 571 (816)
++|++ .++.|
T Consensus 294 ~~ga~~l~~v~N 305 (782)
T KOG3676|consen 294 ELGANALEHVRN 305 (782)
T ss_pred hcCCCccccccc
Confidence 99999 54443
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.18 E-value=4.4e-11 Score=96.39 Aligned_cols=54 Identities=39% Similarity=0.510 Sum_probs=46.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 003477 502 GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 561 (816)
Q Consensus 502 G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLl 561 (816)
|+||||+||..|+.+++++|+++|++++. +|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~------~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINA------QDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence 78999999999999999999999999998 8899999999999999999999986
No 87
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.14 E-value=4.9e-10 Score=113.78 Aligned_cols=106 Identities=26% Similarity=0.269 Sum_probs=96.7
Q ss_pred CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCC-----HHHHHHHHhcCC---CCCC
Q 003477 459 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR-----EKMVVDLLSAGA---KPNL 530 (816)
Q Consensus 459 ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~-----~eiV~lLL~~GA---d~n~ 530 (816)
....+..+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+ .+++++|++.|+ +.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~ 142 (235)
T COG0666 63 DRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL 142 (235)
T ss_pred ccccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc
Confidence 33445567789999999999999999999999999999999999999999999999 999999999999 4444
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhcccc
Q 003477 531 VTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 570 (816)
Q Consensus 531 ~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 570 (816)
+|..|.||||+|+..|+.+++++|++.|++....
T Consensus 143 ------~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~ 176 (235)
T COG0666 143 ------RDEDGNTPLHWAALNGDADIVELLLEAGADPNSR 176 (235)
T ss_pred ------cCCCCCchhHHHHHcCchHHHHHHHhcCCCCccc
Confidence 7999999999999999999999999999887666
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=2.7e-10 Score=125.82 Aligned_cols=90 Identities=20% Similarity=0.113 Sum_probs=84.5
Q ss_pred HHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 003477 473 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 552 (816)
Q Consensus 473 LHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G 552 (816)
|.-|+.-|-.++|+-.+..--|+...+..|.||||-|+..||.+||++||+.|+|+|+ .|.+|+||||+|+.++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------ADSDGWTPLHCAASCN 627 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------ccCCCCchhhhhhhcC
Confidence 3448888999999999988889999999999999999999999999999999999999 9999999999999999
Q ss_pred CHHHHHHHHhhhhhcc
Q 003477 553 FDGLAAFLSEQALVAQ 568 (816)
Q Consensus 553 ~~~iv~lLle~Ga~~~ 568 (816)
+..+++.|+++|+..-
T Consensus 628 nv~~ckqLVe~Gaavf 643 (752)
T KOG0515|consen 628 NVPMCKQLVESGAAVF 643 (752)
T ss_pred chHHHHHHHhccceEE
Confidence 9999999999998763
No 89
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.99 E-value=2.3e-10 Score=134.40 Aligned_cols=131 Identities=19% Similarity=0.171 Sum_probs=117.2
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccc-cCCCCcHHHHH
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALHWA 509 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~-D~~G~TpLh~A 509 (816)
..+-.|+|-.||..|+-+ ++++|+. |+++..+|+.|.+||.+|+-.||..+|+.|+++.++++.+ |..+.|+|-+|
T Consensus 754 e~n~~t~LT~acaggh~e--~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHRE--EVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLA 831 (2131)
T ss_pred CccccccccccccCccHH--HHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEe
Confidence 345678899999988887 6787777 9999999999999999999999999999999999999875 66899999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhcccc
Q 003477 510 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 570 (816)
Q Consensus 510 a~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~ 570 (816)
|..|+.++|++||.+|++-.. ++-...|||.+|...|+.+|+.+|+.+|+..+-.
T Consensus 832 csggr~~vvelLl~~gankeh------rnvsDytPlsla~Sggy~~iI~~llS~GseInSr 886 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANKEH------RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSR 886 (2131)
T ss_pred cCCCcchHHHHHHHhhccccc------cchhhcCchhhhcCcchHHHHHHHhhcccccccc
Confidence 999999999999999999877 8888999999999999999999999999766443
No 90
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.91 E-value=3.2e-09 Score=110.19 Aligned_cols=100 Identities=20% Similarity=0.224 Sum_probs=89.6
Q ss_pred HHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCc-cCcCCCchHHHHHHcCChhhHHHHHhCCCCCccc
Q 003477 421 LFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR 498 (816)
Q Consensus 421 li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~-~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~ 498 (816)
++......+...++|.++|.+|+.+|++. ++++|++ |+|+|. .+..+.||||+||..|+.++.++|++.|+.+...
T Consensus 31 LLs~vr~vn~~D~sGMs~LahAaykGnl~--~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~v 108 (396)
T KOG1710|consen 31 LLSTVRQVNQRDPSGMSVLAHAAYKGNLT--LVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLV 108 (396)
T ss_pred HHHHhhhhhccCCCcccHHHHHHhcCcHH--HHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccc
Confidence 33334445666788999999999999999 8999999 999998 6778999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHH
Q 003477 499 DKYGWTALHWAAYYGREKMVVDLL 522 (816)
Q Consensus 499 D~~G~TpLh~Aa~~G~~eiV~lLL 522 (816)
+.-|+|+-.+||.-|+.+||..+-
T Consensus 109 NsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 109 NSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred cchhhhHHHHHHHhcchHHHHHHh
Confidence 999999999999999999998763
No 91
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.91 E-value=1.3e-09 Score=128.19 Aligned_cols=139 Identities=16% Similarity=0.159 Sum_probs=121.7
Q ss_pred hCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCc-cCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCC
Q 003477 425 VGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYG 502 (816)
Q Consensus 425 l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~-~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G 502 (816)
+.+.+.....|.+||+.|+-.|+.. +++.|++ .+++.. .|..+.|+|-+||..|..++|++||.+|++-..++...
T Consensus 780 ganiehrdkkgf~plImaatagh~t--vV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsD 857 (2131)
T KOG4369|consen 780 GANIEHRDKKGFVPLIMAATAGHIT--VVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSD 857 (2131)
T ss_pred cccccccccccchhhhhhcccCchH--HHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhh
Confidence 3555666778999999999999988 7777777 778877 67889999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccc
Q 003477 503 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 569 (816)
Q Consensus 503 ~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l 569 (816)
+|||-+|...|..++|.+||.+|+.+|..+ -.+.|-.||++|..+||...++.|++.|.+.+.
T Consensus 858 ytPlsla~Sggy~~iI~~llS~GseInSrt----gSklgisPLmlatmngh~~at~~ll~~gsdiNa 920 (2131)
T KOG4369|consen 858 YTPLSLARSGGYTKIIHALLSSGSEINSRT----GSKLGISPLMLATMNGHQAATLSLLQPGSDINA 920 (2131)
T ss_pred cCchhhhcCcchHHHHHHHhhccccccccc----ccccCcchhhhhhhccccHHHHHHhcccchhcc
Confidence 999999999999999999999999998754 567889999999999999999999998877643
No 92
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.82 E-value=5.4e-09 Score=92.57 Aligned_cols=83 Identities=27% Similarity=0.353 Sum_probs=68.9
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhHHhhhcCcceecCCCC-CCCceeeeeccCCCCc
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHKP 342 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph-~~G~V~l~v~~~~~~~ 342 (816)
+.|++|+|..|+..|||+|+|.|.+|.. .....|+||+.+....-+++..+.|.+|++ .+|.+++.|..++. .
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~-~ 74 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGA-R 74 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCc-c
Confidence 4799999999999999999999999976 345899999987665556888999999998 57888899988876 3
Q ss_pred ccccccccCC
Q 003477 343 ISQVLNFEYR 352 (816)
Q Consensus 343 ~s~~~~Fey~ 352 (816)
.+....|+|.
T Consensus 75 ~~~~~~F~Y~ 84 (85)
T cd01179 75 RLAPLVFTYT 84 (85)
T ss_pred cCCCccEEEe
Confidence 3345678775
No 93
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=98.80 E-value=2.4e-09 Score=93.75 Aligned_cols=84 Identities=23% Similarity=0.278 Sum_probs=72.8
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhHH-hhhcCcceecCCCCCCCceeeeeccCCCCc
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAE-FVQAGVYRCFLPPHSPGLFLLYMSLDGHKP 342 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~-ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~ 342 (816)
+.|++|+|.|++..||++|+|.|.+|.. ....+.|+||+...+.. .++++.+.|..|++.+|.+++.|..++...
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~ 76 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQI 76 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCe
Confidence 4799999999999999999999999922 24589999999988887 899999999999999999999999999667
Q ss_pred ccccccccC
Q 003477 343 ISQVLNFEY 351 (816)
Q Consensus 343 ~s~~~~Fey 351 (816)
.++...|+|
T Consensus 77 ~~~~~~F~Y 85 (85)
T PF01833_consen 77 YSNNTSFTY 85 (85)
T ss_dssp EEEEEEEEE
T ss_pred EECCeeeEC
Confidence 788888876
No 94
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.79 E-value=2.5e-08 Score=109.79 Aligned_cols=97 Identities=27% Similarity=0.222 Sum_probs=88.9
Q ss_pred CCccCcCCCch------HHHHHHcCChhhHHHHHhCCCCCccccC-CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC
Q 003477 462 TTEYDVHGQGV------IHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDP 534 (816)
Q Consensus 462 in~~d~~G~Tp------LHlAa~~G~~~iv~~LL~~Gadin~~D~-~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~ 534 (816)
...+|.+|.|. ||-.+..|+.+..--||..||++|+.+. .|.||||.|+..|+.--+++|+-+|||+++
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a---- 195 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA---- 195 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC----
Confidence 45567777765 8999999999999999999999999886 699999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhhh
Q 003477 535 TSQNPGGLNAADIASKKGFDGLAAFLSEQA 564 (816)
Q Consensus 535 ~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 564 (816)
.|.+|.||+++|...||.++++-|++.-
T Consensus 196 --~d~~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 196 --QDSSGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred --CCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence 9999999999999999999999998764
No 95
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.75 E-value=4.7e-09 Score=121.09 Aligned_cols=83 Identities=25% Similarity=0.363 Sum_probs=79.4
Q ss_pred CCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccC-CCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 003477 462 TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPG 540 (816)
Q Consensus 462 in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~-~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~ 540 (816)
.|.+|..|+|+||+|+..|...++++||.+|++++.+|. .||||||-|.++|+.+|+-+||.+|+...+ +|++
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i------~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI------KDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE------eccc
Confidence 678999999999999999999999999999999999998 699999999999999999999999999888 9999
Q ss_pred CCCHHHHHHH
Q 003477 541 GLNAADIASK 550 (816)
Q Consensus 541 G~TpL~lA~~ 550 (816)
|..||++-++
T Consensus 119 glsplq~~~r 128 (1267)
T KOG0783|consen 119 GLSPLQFLSR 128 (1267)
T ss_pred CCCHHHHHhh
Confidence 9999998776
No 96
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.67 E-value=2.8e-08 Score=88.03 Aligned_cols=84 Identities=24% Similarity=0.247 Sum_probs=68.8
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEc-CCcchhHHhhhcCcceecCCCCCC---CceeeeeccCC
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-GEVRVPAEFVQAGVYRCFLPPHSP---GLFLLYMSLDG 339 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~F-G~v~V~a~ll~~gvlrC~~Pph~~---G~V~l~v~~~~ 339 (816)
+.|++|+|.+|+..||++|+|.|.+|.. ...+.|+| |+.+.....+.+..+.|.+|+... |.|.+.+...+
T Consensus 1 P~I~~i~P~~g~~~GGt~itI~G~~f~~-----~~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~ 75 (89)
T cd00102 1 PVITSISPSSGPVSGGTEVTITGSNFGS-----GSNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGN 75 (89)
T ss_pred CEEeEEECCcCCCCCCeEEEEEEECCCC-----CCcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCC
Confidence 4799999999999999999999999976 22689999 898766666789999999999843 78888887665
Q ss_pred CCcccccccccCC
Q 003477 340 HKPISQVLNFEYR 352 (816)
Q Consensus 340 ~~~~s~~~~Fey~ 352 (816)
....+....|+|.
T Consensus 76 ~~~~~~~~~F~Y~ 88 (89)
T cd00102 76 GGITSSPLTFTYV 88 (89)
T ss_pred CcccCCCccEEee
Confidence 3346667778875
No 97
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.63 E-value=7.4e-08 Score=107.21 Aligned_cols=120 Identities=27% Similarity=0.270 Sum_probs=107.6
Q ss_pred HHHHHHHcCCcHHHHHHHHHcCCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCC--CccccCCCCcHHHHHHHcCCH
Q 003477 438 SFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS--LDFRDKYGWTALHWAAYYGRE 515 (816)
Q Consensus 438 ~L~~Aa~~~~l~~~lv~~Ll~ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gad--in~~D~~G~TpLh~Aa~~G~~ 515 (816)
.++.|+..+++.. +.+.-..|.++-.++.+..|.||+|+..|+.++|++||++|.. +++.|..|.|+||-|+..++.
T Consensus 869 eil~av~~~D~~k-lqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r 947 (1004)
T KOG0782|consen 869 EILRAVLSSDLMK-LQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR 947 (1004)
T ss_pred HHHHHHHhccHHH-HHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch
Confidence 4788889888765 5555555888888999999999999999999999999999964 678889999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhh
Q 003477 516 KMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 564 (816)
Q Consensus 516 eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~G 564 (816)
.+..+|++.||.... .|..|.||-.-|-..|..+++.||-...
T Consensus 948 ~vc~~lvdagasl~k------td~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 948 AVCQLLVDAGASLRK------TDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred HHHHHHHhcchhhee------cccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 999999999999987 8899999999999999999999997654
No 98
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.58 E-value=4.9e-08 Score=107.21 Aligned_cols=93 Identities=25% Similarity=0.223 Sum_probs=85.8
Q ss_pred CcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCCCCCCCH
Q 003477 466 DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNA 544 (816)
Q Consensus 466 d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~-~GAd~n~~td~~~~d~~G~Tp 544 (816)
+.++.-.+++||..|....++-+.-.|.|++.+|.+.+|+||.||..|+++++++||+ .+.+++. +|..|+||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~------kDRw~rtP 576 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDP------KDRWGRTP 576 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCCh------hhccCCCc
Confidence 3456778999999999999999999999999999999999999999999999999997 5777777 99999999
Q ss_pred HHHHHHcCCHHHHHHHHhhh
Q 003477 545 ADIASKKGFDGLAAFLSEQA 564 (816)
Q Consensus 545 L~lA~~~G~~~iv~lLle~G 564 (816)
|+-|...+|.+++++|-+.-
T Consensus 577 lDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred chHhHhcCcHHHHHHHHHHh
Confidence 99999999999999998864
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=98.52 E-value=1.1e-07 Score=67.30 Aligned_cols=30 Identities=43% Similarity=0.442 Sum_probs=24.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 003477 501 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 530 (816)
Q Consensus 501 ~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~ 530 (816)
+|+||||+||..|+.++|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 478888888888888888888888888763
No 100
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=98.50 E-value=3e-08 Score=91.00 Aligned_cols=24 Identities=38% Similarity=0.451 Sum_probs=21.7
Q ss_pred HHHHHHhcccCCCcEEEEEeeecc
Q 003477 18 HLVSCLLCFRTLENIVLVHYRETH 41 (816)
Q Consensus 18 ~~~~~~~~~~~~~~~v~v~y~~~~ 41 (816)
|==||||||++|||||||||++|+
T Consensus 95 ~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 95 HRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred eeEEEEccCCCCceEEEEEeeecC
Confidence 445899999999999999999986
No 101
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.42 E-value=4.4e-07 Score=101.90 Aligned_cols=92 Identities=25% Similarity=0.358 Sum_probs=61.7
Q ss_pred cHHHHHHHcCCcHHHHHHHHHcCC--CCCc--cCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHc
Q 003477 437 DSFFELTLKSKLKEWLLERVVEGS--KTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 512 (816)
Q Consensus 437 t~L~~Aa~~~~l~~~lv~~Ll~ga--~in~--~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~ 512 (816)
..|+.|....++.. ++-+|..|. .+|. -+.+|+|+||+||..|+..+.++|+++|+|+-.+|..|+|||.||-..
T Consensus 626 qqLl~A~~~~Dl~t-~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a 704 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQT-AILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQA 704 (749)
T ss_pred HHHHHHHHHHHHHH-HHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhc
Confidence 34666666666552 222233333 2333 345667888888888887777777888888877888888888888777
Q ss_pred CCHHHHHHHHhcCCCCC
Q 003477 513 GREKMVVDLLSAGAKPN 529 (816)
Q Consensus 513 G~~eiV~lLL~~GAd~n 529 (816)
|.-+|+.+||.+|+...
T Consensus 705 ~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 705 GSQECIDVLLQYGCPDE 721 (749)
T ss_pred ccHHHHHHHHHcCCCcc
Confidence 77788888887776544
No 102
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.38 E-value=6e-07 Score=80.05 Aligned_cols=85 Identities=19% Similarity=0.179 Sum_probs=63.1
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhHHhhhcCcceecCCCC-CC--CceeeeeccCCC
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SP--GLFLLYMSLDGH 340 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph-~~--G~V~l~v~~~~~ 340 (816)
+.|+.|+|.+|+..||+.|+|.|.+|... .....|.||+.+....-+.+..+.|.+|+. .+ +.|.+.+...+.
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~----~~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSG----SPRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANV 76 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCC----CceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCccc
Confidence 47999999999999999999999998762 136899999987665556889999999998 33 455555544331
Q ss_pred -CcccccccccCC
Q 003477 341 -KPISQVLNFEYR 352 (816)
Q Consensus 341 -~~~s~~~~Fey~ 352 (816)
...+....|+|.
T Consensus 77 ~~~~~~~~~F~Y~ 89 (90)
T cd00603 77 SARVLSNTTFTYV 89 (90)
T ss_pred cccccCCcceEEe
Confidence 124455566664
No 103
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.35 E-value=5.4e-07 Score=64.99 Aligned_cols=30 Identities=43% Similarity=0.474 Sum_probs=23.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 003477 501 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 530 (816)
Q Consensus 501 ~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~ 530 (816)
+|+||||+|+..|+.+++++||++|++++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 477888888888888888888888887776
No 104
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.35 E-value=4.7e-07 Score=99.72 Aligned_cols=93 Identities=17% Similarity=0.169 Sum_probs=84.0
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHcCCCCCccCcCCCchHHHHHHcCChhhHHHHHh-CCCCCccccCCCCcHHHHHHH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWAAY 511 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~-~Gadin~~D~~G~TpLh~Aa~ 511 (816)
.++..++++|+..|++.. +..+.+.|.|++..|.+.+|+||.||.-|+.+++++||+ .+++++.+|.+|+|||.-|..
T Consensus 504 ~~~~i~~~~aa~~GD~~a-lrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSA-LRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred ccchhhhhhhhhcCCHHH-HHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence 446678999999999985 666677799999999999999999999999999999997 579999999999999999999
Q ss_pred cCCHHHHHHHHhcCC
Q 003477 512 YGREKMVVDLLSAGA 526 (816)
Q Consensus 512 ~G~~eiV~lLL~~GA 526 (816)
.+|.+++++|-++-.
T Consensus 583 F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 583 FKHKEVVKLLEEAQY 597 (622)
T ss_pred cCcHHHHHHHHHHhc
Confidence 999999999987644
No 105
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.32 E-value=1e-06 Score=98.89 Aligned_cols=87 Identities=20% Similarity=0.338 Sum_probs=72.8
Q ss_pred cHHHHHHHcCCcHHHHHHH-HHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCC
Q 003477 437 DSFFELTLKSKLKEWLLER-VVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 514 (816)
Q Consensus 437 t~L~~Aa~~~~l~~~lv~~-Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~ 514 (816)
-++|.++...+... +.+. +.+ +..++..|..|.||||+|+.+|+...++.|+.+|+++..+++.||+|||-|+..|+
T Consensus 22 ~~lh~~~~~~~~~s-l~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDS-LEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhh-HHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCC
Confidence 35777777776665 3332 333 66788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 003477 515 EKMVVDLLSA 524 (816)
Q Consensus 515 ~eiV~lLL~~ 524 (816)
.+++..+|.+
T Consensus 101 ~q~i~~vlr~ 110 (560)
T KOG0522|consen 101 EQIITEVLRH 110 (560)
T ss_pred HHHHHHHHHH
Confidence 9888777653
No 106
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.28 E-value=2.2e-06 Score=94.93 Aligned_cols=86 Identities=17% Similarity=0.250 Sum_probs=74.5
Q ss_pred cHHHHHHHcCCcHHHHHHHHHcCCCCCccC-cCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCH
Q 003477 437 DSFFELTLKSKLKEWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 515 (816)
Q Consensus 437 t~L~~Aa~~~~l~~~lv~~Ll~ga~in~~d-~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~ 515 (816)
-.||..+..++++. .+.+|..|+++|..+ ..|.||||.||..|...-+++|+-+|||++..|.+|.||+.+|-..||-
T Consensus 135 rQLhasvRt~nlet-~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~ 213 (669)
T KOG0818|consen 135 KQLHSSVRTGNLET-CLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHH 213 (669)
T ss_pred HHHHHHhhcccHHH-HHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCch
Confidence 35777777888774 455555599999966 4799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 003477 516 KMVVDLLS 523 (816)
Q Consensus 516 eiV~lLL~ 523 (816)
++++-|++
T Consensus 214 ~laeRl~e 221 (669)
T KOG0818|consen 214 ELAERLVE 221 (669)
T ss_pred HHHHHHHH
Confidence 88877765
No 107
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.27 E-value=1.8e-06 Score=96.97 Aligned_cols=87 Identities=24% Similarity=0.254 Sum_probs=74.4
Q ss_pred chHHHHHHcCChhhHHH--HHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003477 471 GVIHLCAMLGYTWAILL--FSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 548 (816)
Q Consensus 471 TpLHlAa~~G~~~iv~~--LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA 548 (816)
-|||+++.....+-+.. +.+.+..++.+|..|.||||+|+..||.+.+++|+.+||++.. +|..|++|||.|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~------kN~~gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI------KNNEGWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc------cccccccHHHHH
Confidence 45999988776555444 3344678899999999999999999999999999999999998 999999999999
Q ss_pred HHcCCHHHHHHHHhh
Q 003477 549 SKKGFDGLAAFLSEQ 563 (816)
Q Consensus 549 ~~~G~~~iv~lLle~ 563 (816)
+..|+..++..++.+
T Consensus 96 v~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRH 110 (560)
T ss_pred HHcCCHHHHHHHHHH
Confidence 999999887766644
No 108
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.26 E-value=1.7e-06 Score=78.11 Aligned_cols=87 Identities=14% Similarity=0.054 Sum_probs=63.3
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhH---HhhhcCcceecCCCCC-C-CceeeeeccC
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPA---EFVQAGVYRCFLPPHS-P-GLFLLYMSLD 338 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a---~ll~~gvlrC~~Pph~-~-G~V~l~v~~~ 338 (816)
+.|++|+|..||..|||+|+|.|.+|.... +.....+++|+.+-.- .......++|.+||+. + +..++.|..+
T Consensus 1 P~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~--~~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~ 78 (94)
T cd01180 1 PVITEFFPLSGPLEGGTRLTICGSNLGLRK--NDVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVG 78 (94)
T ss_pred CeeEEEeCCCCCCCCCEEEEEEEEcCCCCc--ccceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEEC
Confidence 469999999999999999999999997621 1135788999975222 2456678999999984 3 6667777776
Q ss_pred CCC-cccccccccCC
Q 003477 339 GHK-PISQVLNFEYR 352 (816)
Q Consensus 339 ~~~-~~s~~~~Fey~ 352 (816)
+.. .+.....|+|.
T Consensus 79 ~~~~~~~~~~~F~Y~ 93 (94)
T cd01180 79 HGSFRTESSEGFSFV 93 (94)
T ss_pred CceecccccCceEEe
Confidence 642 34445667775
No 109
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.25 E-value=5.1e-06 Score=99.92 Aligned_cols=84 Identities=27% Similarity=0.305 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHHhhhhHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q 003477 612 AAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLNM 688 (816)
Q Consensus 612 ~~~AAi~IQ~~~R~~~~R~r~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rk---~~~aai~IQa~~Rg~~~Rk~~~~~ 688 (816)
...+++.||+.+|+|..|++|..++ .+++.||+.+||+..|+ +..||+.||+.+|++..|+.|...
T Consensus 672 l~~~~~~iq~~~r~~~~r~~f~~~r-----------~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~ 740 (862)
T KOG0160|consen 672 LSAAKVLIQRQIRGYLARKKFLQLR-----------SAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRAL 740 (862)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3456667888888888888887777 88888888888888887 667888888888888888888888
Q ss_pred HHHHHHHHHHHhhHHHHH
Q 003477 689 RRQAIKIQAAFRGFQVRK 706 (816)
Q Consensus 689 r~aai~IQa~~Rg~~~Rk 706 (816)
+.+++.||+.+|++..|.
T Consensus 741 ~~~~~~~qs~~r~~~~r~ 758 (862)
T KOG0160|consen 741 IPASITIQSGVRAMLARN 758 (862)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 888888888888888887
No 110
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.24 E-value=1.9e-06 Score=96.87 Aligned_cols=90 Identities=19% Similarity=0.115 Sum_probs=76.7
Q ss_pred HHHHHHcCChhhHHHHHhCCCC--Cc--cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHH
Q 003477 473 IHLCAMLGYTWAILLFSWSGLS--LD--FRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 548 (816)
Q Consensus 473 LHlAa~~G~~~iv~~LL~~Gad--in--~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA 548 (816)
|.-|..-.....+-+||.+|.. +| .-+.+|+||||+||..|++.+.++|+-+|+|+.+ +|..|.|||.+|
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------rda~g~t~l~ya 701 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------RDAHGRTALFYA 701 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee------cccCCchhhhhH
Confidence 3445555566777788998854 33 3456789999999999999999999999999998 999999999999
Q ss_pred HHcCCHHHHHHHHhhhhhcc
Q 003477 549 SKKGFDGLAAFLSEQALVAQ 568 (816)
Q Consensus 549 ~~~G~~~iv~lLle~Ga~~~ 568 (816)
...|..+++.+|+.+|..+.
T Consensus 702 r~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 702 RQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred hhcccHHHHHHHHHcCCCcc
Confidence 99999999999999997753
No 111
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.23 E-value=1.3e-06 Score=63.07 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=31.3
Q ss_pred CCCchHHHHHHcCChhhHHHHHhCCCCCccccC
Q 003477 468 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK 500 (816)
Q Consensus 468 ~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~ 500 (816)
+|.||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999874
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.23 E-value=3e-06 Score=83.97 Aligned_cols=66 Identities=35% Similarity=0.479 Sum_probs=60.0
Q ss_pred CCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhh
Q 003477 492 GLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 563 (816)
Q Consensus 492 Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~G-Ad~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 563 (816)
+.+||.+|..|||||+.|+..|..+.|.+|+.+| +.+.+ .|..|.+++.+|-+.|+.+++..|.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv------~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV------TDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc------cccccchHHHHHHhcChHHHHHHHHHH
Confidence 5689999999999999999999999999999999 78877 889999999999999999999999887
No 113
>PF13606 Ank_3: Ankyrin repeat
Probab=98.23 E-value=1.1e-06 Score=62.05 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=28.4
Q ss_pred CCCchHHHHHHcCChhhHHHHHhCCCCCcc
Q 003477 468 HGQGVIHLCAMLGYTWAILLFSWSGLSLDF 497 (816)
Q Consensus 468 ~G~TpLHlAa~~G~~~iv~~LL~~Gadin~ 497 (816)
+|+||||+||..|+.++|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 114
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.20 E-value=1.8e-06 Score=76.89 Aligned_cols=83 Identities=25% Similarity=0.296 Sum_probs=60.3
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhHHhh--hcCcceecCCCC--CCCceee-eeccC
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFV--QAGVYRCFLPPH--SPGLFLL-YMSLD 338 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~ll--~~gvlrC~~Pph--~~G~V~l-~v~~~ 338 (816)
+.|+.|+|.+|+..||++|+|+|.+|.. .....|.|+...++..++ .+..++|..|+. .++.+++ .+..+
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 6899999999999999999999999876 446677776644455444 578999999987 4677777 56665
Q ss_pred CCCcccccccccC
Q 003477 339 GHKPISQVLNFEY 351 (816)
Q Consensus 339 ~~~~~s~~~~Fey 351 (816)
+....+....|+|
T Consensus 77 ~~~~~~~~~~f~y 89 (90)
T smart00429 77 NGGVPSSPQPFTY 89 (90)
T ss_pred CCCccCcccCeEE
Confidence 5433333334554
No 115
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=98.17 E-value=1.5e-05 Score=95.95 Aligned_cols=77 Identities=26% Similarity=0.288 Sum_probs=53.2
Q ss_pred HHHHHHHHhhhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 003477 648 IAALKIQHAFRNFEVRKKMA----AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAIL 723 (816)
Q Consensus 648 ~Aa~~IQ~~~R~~~~rk~~~----aai~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~R 723 (816)
.+++.||+.+|+|..|+.+. +++.||+.+||+..|+... ...|++.||+.||++..|++|+..+.+++.+|+.+|
T Consensus 674 ~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs~~r 752 (862)
T KOG0160|consen 674 AAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRRYRALIPASITIQSGVR 752 (862)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555777777777776643 6677777777777776333 444677777777777777777777777777777777
Q ss_pred HH
Q 003477 724 RW 725 (816)
Q Consensus 724 r~ 725 (816)
++
T Consensus 753 ~~ 754 (862)
T KOG0160|consen 753 AM 754 (862)
T ss_pred HH
Confidence 76
No 116
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.12 E-value=2.7e-06 Score=102.85 Aligned_cols=99 Identities=26% Similarity=0.300 Sum_probs=87.8
Q ss_pred CCCCCc--cCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC
Q 003477 459 GSKTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTS 536 (816)
Q Consensus 459 ga~in~--~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~ 536 (816)
++++|. .-..|.|+||.|+..|..-++++|+.+|+++|.+|..|.||||.+...|+...+.+|++.||++++
T Consensus 644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a------ 717 (785)
T KOG0521|consen 644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA------ 717 (785)
T ss_pred hhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc------
Confidence 555554 334689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhh
Q 003477 537 QNPGGLNAADIASKKGFDGLAAFLSEQ 563 (816)
Q Consensus 537 ~d~~G~TpL~lA~~~G~~~iv~lLle~ 563 (816)
.+.+|.+|+++|....+.+++-+|.-.
T Consensus 718 ~~~~~~~~l~~a~~~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 718 FDPDGKLPLDIAMEAANADIVLLLRLA 744 (785)
T ss_pred cCccCcchhhHHhhhccccHHHHHhhh
Confidence 889999999999877777776666544
No 117
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=98.01 E-value=0.00023 Score=88.62 Aligned_cols=145 Identities=22% Similarity=0.205 Sum_probs=91.0
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q 003477 611 TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLN 687 (816)
Q Consensus 611 ~~~~AAi~IQ~~~R~~~~R~r~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rk---~~~aai~IQa~~Rg~~~Rk~~~~ 687 (816)
.....+++||++||++..|+++.+.. ++++++..+|..+|-+..+. ..++++.||..||....|+++..
T Consensus 743 ~~~~~~~~iq~aiR~~~~rrr~~~~~--------k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~ 814 (1463)
T COG5022 743 KLDNIATRIQRAIRGRYLRRRYLQAL--------KRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRS 814 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHH
Confidence 44667888888888888888875433 34445555555554432222 23477888888888888888877
Q ss_pred HHHHHHHHH-HHHhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCCchhhHHHHHHHHH
Q 003477 688 MRRQAIKIQ-AAFRGFQVRKQ--YGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEEDFYRASRK 764 (816)
Q Consensus 688 ~r~aai~IQ-a~~Rg~~~Rk~--y~~~~~aa~~IQ~~~Rr~r~~r~~~r~lr~~~~~~~~~~~Q~~~~~~~~~~l~~~Rk 764 (816)
.-..++.+| ..+|....|.. -...+.+...+|+++|-. .+++.+
T Consensus 815 ~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~-~~~kr~-------------------------------- 861 (1463)
T COG5022 815 YLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSL-KAKKRF-------------------------------- 861 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh-hhhHHH--------------------------------
Confidence 777788888 56666666653 344445677777776554 222222
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 003477 765 QAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQ 799 (816)
Q Consensus 765 q~e~~~~~Av~~IQs~~R~~~aR~qyrrlk~~~~~ 799 (816)
..+.+.++.+|..+|...|++++..++.+..+
T Consensus 862 ---~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~ 893 (1463)
T COG5022 862 ---SLLKKETIYLQSAQRVELAERQLQELKIDVKS 893 (1463)
T ss_pred ---HHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 22335556677777777777777777666543
No 118
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.88 E-value=5.4e-06 Score=96.51 Aligned_cols=73 Identities=26% Similarity=0.295 Sum_probs=66.2
Q ss_pred CccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhhhhhccccCcc
Q 003477 495 LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 573 (816)
Q Consensus 495 in~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d-~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~l~ 573 (816)
.|.+|..|+|+||+|+..|..++++.||.+|++++. +| ..|+||||-|...|+.+++-+|+.+|+...+.+-.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~v------qD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFV------QDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeee------ccccccchHhhHhhhhchHHHHHHHHhcCCceEEeccc
Confidence 688999999999999999999999999999999998 55 46999999999999999999999999776665543
No 119
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.85 E-value=4.9e-05 Score=90.06 Aligned_cols=128 Identities=13% Similarity=0.005 Sum_probs=103.1
Q ss_pred CccCcHHHHHHHcCCcHHHHHHHHHc---C--CCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHH
Q 003477 433 PEAKDSFFELTLKSKLKEWLLERVVE---G--SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 507 (816)
Q Consensus 433 ~~g~t~L~~Aa~~~~l~~~lv~~Ll~---g--a~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh 507 (816)
..+....+.+|.+|+.. .+++.++ . -++|..|.-|+++||+|..+.+.+++++|++++..+ ..||-
T Consensus 23 ~~~e~~fL~a~E~gd~~--~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL 93 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVP--LVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALL 93 (822)
T ss_pred chhhHHHHHHHHcCChH--HHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHH
Confidence 34556678899999988 5555554 2 467889999999999999999999999999998766 24899
Q ss_pred HHHHcCCHHHHHHHHhcCCCCC----CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccc
Q 003477 508 WAAYYGREKMVVDLLSAGAKPN----LVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 569 (816)
Q Consensus 508 ~Aa~~G~~eiV~lLL~~GAd~n----~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l 569 (816)
+|...|..++|++|+.+-.... ..+++.....-+.||+.+|+..++.+|+++|+..|++.+.
T Consensus 94 ~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 94 LAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred HHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 9999999999999997643321 1122334667789999999999999999999999988654
No 120
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=97.82 E-value=3.2e-05 Score=70.58 Aligned_cols=60 Identities=23% Similarity=0.391 Sum_probs=48.6
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcc-hhHHhhhcCcceecCCCC
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVR-VPAEFVQAGVYRCFLPPH 326 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~-V~a~ll~~gvlrC~~Pph 326 (816)
+.|++|+|.|||..||+.|+|+|.+|.. +......+++|+.. ++-.+.++..+.|..|+.
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds---~q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~ 61 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNT---VQEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSL 61 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCc---ccccEEEEEECCceeccceeCCCCEEEeCCCCC
Confidence 4799999999999999999999999976 22347888899853 333356788999999986
No 121
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=97.68 E-value=0.00045 Score=80.06 Aligned_cols=64 Identities=19% Similarity=0.302 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 003477 667 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVD 738 (816)
Q Consensus 667 ~aai~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~Rr~r~~r~~~r~lr~~ 738 (816)
.-++.||+.||||.+|.+|++++.+++.|+ |||.+ ++++.+..||+.+|+|+++|-.-+.++.-
T Consensus 697 ~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~-------K~ks~v~el~~~~rg~k~~r~ygk~~~WP 760 (1001)
T KOG0164|consen 697 SLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRY-------KLKSYVQELQRRFRGAKQMRDYGKSIRWP 760 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-------HHHHHHHHHHHHHHhhhhccccCCCCCCC
Confidence 378899999999999999999999999998 88833 46677888999999996665555555533
No 122
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.67 E-value=7.7e-05 Score=80.70 Aligned_cols=74 Identities=16% Similarity=0.126 Sum_probs=45.3
Q ss_pred CcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHc
Q 003477 436 KDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 512 (816)
Q Consensus 436 ~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~ 512 (816)
...|++||..|+++ .++.|++ |.++|..|....+||.+|+..||.++|++|+++||-.+.-...|.. -|+++.+
T Consensus 37 f~elceacR~GD~d--~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~R-C~YgaLn 111 (516)
T KOG0511|consen 37 FGELCEACRAGDVD--RVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDR-CHYGALN 111 (516)
T ss_pred hHHHHHHhhcccHH--HHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcch-hhhhhhh
Confidence 34566666777666 4566666 6677777766667777777777777777777776655433334433 3455444
No 123
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=97.65 E-value=6.3e-05 Score=66.00 Aligned_cols=79 Identities=14% Similarity=0.058 Sum_probs=65.3
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcc
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 343 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~ 343 (816)
+.|..++|.-|.. |.+|+|.|..|.+. .-.++||+.+.+...|++..+.|.+|.+.+|...+.|...+. ..
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G-~~ 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGSA------PGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADG-AT 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCCC------CcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCC-cc
Confidence 6799999999987 88999999999741 357899999988888999999999999999999999997533 24
Q ss_pred cccccccC
Q 003477 344 SQVLNFEY 351 (816)
Q Consensus 344 s~~~~Fey 351 (816)
|+...|++
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 55555543
No 124
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.62 E-value=9.9e-05 Score=73.40 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=64.8
Q ss_pred CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCC-CCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 003477 459 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAK 527 (816)
Q Consensus 459 ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~G-adin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd 527 (816)
+.++|.+|..|+|+|+.|+.-|..+++.+|+.+| +.+...|..|.+++.+|-..|+.++|..|-++-.+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4689999999999999999999999999999999 99999999999999999999999999999887444
No 125
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.51 E-value=0.00015 Score=78.58 Aligned_cols=88 Identities=18% Similarity=0.202 Sum_probs=71.3
Q ss_pred CchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 003477 470 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 549 (816)
Q Consensus 470 ~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~ 549 (816)
..-|..||..|..+.|+.|++.|+++|.+|.....||.+|+.+||+.+|++||++||-... -..+|.-++ +++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r------dtf~G~RC~-Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR------DTFDGDRCH-YGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc------cccCcchhh-hhh
Confidence 4568899999999999999999999999999999999999999999999999999998775 334555554 344
Q ss_pred HcCCHHHHHHHHhhhhh
Q 003477 550 KKGFDGLAAFLSEQALV 566 (816)
Q Consensus 550 ~~G~~~iv~lLle~Ga~ 566 (816)
.+ ..|-++|+.....
T Consensus 110 Ln--d~IR~mllsydi~ 124 (516)
T KOG0511|consen 110 LN--DRIRRMLLSYDIL 124 (516)
T ss_pred hh--HHHHHHHHHHHHH
Confidence 33 3466677766543
No 126
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.36 E-value=0.00021 Score=86.82 Aligned_cols=91 Identities=19% Similarity=0.105 Sum_probs=81.5
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHH
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 510 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa 510 (816)
...|.++||.|+..+... +.++|++ |+++|.+|..|.||||.+...|+...+..|+++|++.++.|..|.+||++|.
T Consensus 653 ~~~~~s~lh~a~~~~~~~--~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSG--AVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAM 730 (785)
T ss_pred hhcccchhhhhhccchHH--HHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHh
Confidence 456789999999999887 7888888 9999999999999999999999999999999999999999999999999998
Q ss_pred HcCCHHHHHHHHhc
Q 003477 511 YYGREKMVVDLLSA 524 (816)
Q Consensus 511 ~~G~~eiV~lLL~~ 524 (816)
...+.+++-+|...
T Consensus 731 ~~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 731 EAANADIVLLLRLA 744 (785)
T ss_pred hhccccHHHHHhhh
Confidence 88777777666543
No 127
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=97.24 E-value=0.0019 Score=74.99 Aligned_cols=83 Identities=16% Similarity=0.252 Sum_probs=63.0
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 003477 611 TAAEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFL---- 686 (816)
Q Consensus 611 ~~~~AAi~IQ~~~R~~~~R~r~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rk~~~aai~IQa~~Rg~~~Rk~~~---- 686 (816)
..-.-+..||++|||+..|.+|++++ ++++.|+ +||.|+ ....+..||+.+||++.++.|.
T Consensus 694 ~l~~lvtllQK~~RG~~~R~ry~rmk-----------a~~~ii~-wyR~~K---~ks~v~el~~~~rg~k~~r~ygk~~~ 758 (1001)
T KOG0164|consen 694 RLPSLVTLLQKAWRGWLARQRYRRMK-----------ASATIIR-WYRRYK---LKSYVQELQRRFRGAKQMRDYGKSIR 758 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHH-HHHHHH---HHHHHHHHHHHHHhhhhccccCCCCC
Confidence 34567889999999999999999888 7777776 888553 3357888999999999998884
Q ss_pred ------HHHHHHHHHHHHHhhHHHHHHH
Q 003477 687 ------NMRRQAIKIQAAFRGFQVRKQY 708 (816)
Q Consensus 687 ------~~r~aai~IQa~~Rg~~~Rk~y 708 (816)
.+|.+...+|..+-.|++++-.
T Consensus 759 WP~pP~~Lr~~~~~L~~lf~rwra~~~~ 786 (1001)
T KOG0164|consen 759 WPAPPLVLREFEELLRELFIRWRAWQIL 786 (1001)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777765555554433
No 128
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=97.17 E-value=0.00052 Score=44.34 Aligned_cols=20 Identities=45% Similarity=0.783 Sum_probs=12.9
Q ss_pred HHHHHHHHHHhhHHHHHHHH
Q 003477 690 RQAIKIQAAFRGFQVRKQYG 709 (816)
Q Consensus 690 ~aai~IQa~~Rg~~~Rk~y~ 709 (816)
+++++||++|||+++|++|+
T Consensus 2 ~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 2 KAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 45666666666666666653
No 129
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.04 E-value=0.006 Score=68.67 Aligned_cols=71 Identities=24% Similarity=0.261 Sum_probs=59.1
Q ss_pred hhhHHHHHhCCCCCccc------cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 003477 482 TWAILLFSWSGLSLDFR------DKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDG 555 (816)
Q Consensus 482 ~~iv~~LL~~Gadin~~------D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~ 555 (816)
...|++|.+++++.|+. |..--|+||+|+..|..++|.+||+.|+|+.+ +|..|.||.+++. +.+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~------kd~~Grtpy~ls~---nkd 474 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST------KDGAGRTPYSLSA---NKD 474 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh------cccCCCCcccccc---cHH
Confidence 66889999999988764 44567999999999999999999999998887 9999999999987 445
Q ss_pred HHHHHH
Q 003477 556 LAAFLS 561 (816)
Q Consensus 556 iv~lLl 561 (816)
+-..++
T Consensus 475 Vk~~F~ 480 (591)
T KOG2505|consen 475 VKSIFI 480 (591)
T ss_pred HHHHHH
Confidence 544444
No 130
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.02 E-value=0.0008 Score=75.90 Aligned_cols=90 Identities=19% Similarity=0.140 Sum_probs=80.0
Q ss_pred CCccCcHHHHHHHcCCcHHHHHHHHHc-CC--CCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHH
Q 003477 432 LPEAKDSFFELTLKSKLKEWLLERVVE-GS--KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 508 (816)
Q Consensus 432 ~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga--~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~ 508 (816)
..+..+-||+|+..|+-+ ++++++. |. -++..|..|.|+||-||..++..++.+|++.|+.+-..|..|.||-.-
T Consensus 896 ~~~~~sllh~a~~tg~~e--ivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~er 973 (1004)
T KOG0782|consen 896 GPDHCSLLHYAAKTGNGE--IVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQER 973 (1004)
T ss_pred CcchhhHHHHHHhcCChH--HHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHH
Confidence 445667899999999988 8888887 43 356688999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHh
Q 003477 509 AAYYGREKMVVDLLS 523 (816)
Q Consensus 509 Aa~~G~~eiV~lLL~ 523 (816)
|-..|..+++.+|-.
T Consensus 974 aqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 974 AQQAGDPDLAAYLES 988 (1004)
T ss_pred HHhcCCchHHHHHhh
Confidence 999999999999864
No 131
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=96.98 E-value=0.0085 Score=75.23 Aligned_cols=27 Identities=30% Similarity=0.300 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 003477 768 ERVERSVVRVQSMFRSKKAQEEYRRMK 794 (816)
Q Consensus 768 ~~~~~Av~~IQs~~R~~~aR~qyrrlk 794 (816)
+...++.+.+|+.+|...++.+|..++
T Consensus 839 ~~~~~~~~L~~~~~rs~~~~kr~~~L~ 865 (1463)
T COG5022 839 EFSLKAEVLIQKFGRSLKAKKRFSLLK 865 (1463)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhh
Confidence 456789999999999999999998886
No 132
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=96.96 E-value=0.001 Score=58.42 Aligned_cols=80 Identities=15% Similarity=0.066 Sum_probs=64.9
Q ss_pred eeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhHHhhhcCcceecCCCCCCCceeeeeccCCCCcc
Q 003477 264 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 343 (816)
Q Consensus 264 ~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph~~G~V~l~v~~~~~~~~ 343 (816)
+.|..++|.-|. -|++|+|.|..|.+. .-.++||+.+.....|++..+.|.+|.+.+|...+.|...+. ..
T Consensus 1 P~I~~i~P~~g~--pG~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G-~~ 71 (81)
T cd00604 1 PLIGSVGPVMGK--PGNTVTISGEGFGST------GGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDG-VT 71 (81)
T ss_pred CeEeeEcCCCCC--CCCEEEEEEECCCCC------ccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCC-cc
Confidence 468899999887 688999999988651 246899999988888999999999999999998888886443 34
Q ss_pred cccccccCC
Q 003477 344 SQVLNFEYR 352 (816)
Q Consensus 344 s~~~~Fey~ 352 (816)
|+...|+|.
T Consensus 72 Sn~~~f~~l 80 (81)
T cd00604 72 SNGYNFEVL 80 (81)
T ss_pred cCcEeEEEc
Confidence 666667764
No 133
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=96.62 E-value=0.00044 Score=79.66 Aligned_cols=209 Identities=16% Similarity=0.218 Sum_probs=124.2
Q ss_pred eeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCcchhHHhhhcCcceecCCCC-CCCceeeeeccCCCCcc
Q 003477 265 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHKPI 343 (816)
Q Consensus 265 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph-~~G~V~l~v~~~~~~~~ 343 (816)
.|.|+.|-.+...||++|+..|..++. ......+|..+...-++||. .+|.|.+.++.-...+-
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~~~~~~~ 308 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITDPSETSD 308 (605)
T ss_pred Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeecccccccc
Confidence 899999999999999999999998754 44556789999999999888 99999998887444332
Q ss_pred cccccccCCC----CCcCCCCCccccccchhHHHHHHHHHHHHhcCcccccccccCCCCCcHHHHHHHhhhhhccCCcHH
Q 003477 344 SQVLNFEYRS----PQLHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWA 419 (816)
Q Consensus 344 s~~~~Fey~~----~~l~~~~~~~~d~~~~~~~~l~~rla~lL~~~~~~lqil~~~~~~~~l~e~~~~a~~i~~~~~~~~ 419 (816)
+....-+-.. +.++.+.++.+ | .+..++ ++|++.++.+. +.+++..+.. .. +|.
T Consensus 309 ~~~~~~~~~~~~~~~~i~~yvp~t~----~----q~~~~a---------l~ivg~n~~~~-l~~a~~~~~~--s~--~~~ 366 (605)
T KOG3836|consen 309 SNNSNSSPPTSSSTKAIFTYVPSTD----R----QLIEYA---------LQIVGLNMNGK-LEDARNIANS--SL--SPT 366 (605)
T ss_pred ccccccCCccCCCcccceeeecCCC----c----eeeeeE---------EEEecccccCc-hhhhcCCccc--cC--CCC
Confidence 2221111111 23444444443 1 222333 78888888777 4444433200 00 000
Q ss_pred HHHHhhCCCCCCCCccCcHHHHHHHcCCcHHHHHHHHHcCCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCcccc
Q 003477 420 YLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD 499 (816)
Q Consensus 420 ~li~~l~~~~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D 499 (816)
......+...+...+. +... .....+.. +--...++ |+..+....+-.|+++|+.++..|
T Consensus 367 ---------~~~~~~n~~~~s~~aI-------~~~~--~~~~~s~~-~lSl~~~~-~~~~~~ss~v~~lik~~~~~~~~d 426 (605)
T KOG3836|consen 367 ---------SPMMNNNSEQLSPYAI-------MSQK--PTNNLSTV-NLSLCDVR-AALNNSSSLVFTLIKKGAHPNDDD 426 (605)
T ss_pred ---------CcceeccccccCccce-------eeec--CCCCCCcc-ceeeehhh-hhhcCCccceeeeecccCccchhc
Confidence 0000000000000000 0000 00011100 00111122 666677777888888999999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 003477 500 KYGWTALHWAAYYGREKMVVDLLSAGAKPNL 530 (816)
Q Consensus 500 ~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~ 530 (816)
..|+||+|+++..|..++.+.++....+.+.
T Consensus 427 ~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~ 457 (605)
T KOG3836|consen 427 KFGFTPLHIPQISGDPRIIQLLLNCKVAISL 457 (605)
T ss_pred ccccccccccCCCCCHHHhhhhhhhhhhhhc
Confidence 9999999999999999999888876555544
No 134
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.35 E-value=0.0057 Score=40.24 Aligned_cols=28 Identities=46% Similarity=0.492 Sum_probs=20.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCC
Q 003477 502 GWTALHWAAYYGREKMVVDLLSAGAKPN 529 (816)
Q Consensus 502 G~TpLh~Aa~~G~~eiV~lLL~~GAd~n 529 (816)
|.||||+|+..|+.++++.|+..|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 6677777777777777777777776553
No 135
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=96.25 E-value=0.0061 Score=39.34 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHH
Q 003477 771 ERSVVRVQSMFRSKKAQEEYR 791 (816)
Q Consensus 771 ~~Av~~IQs~~R~~~aR~qyr 791 (816)
++|++.||+.||++.+|++|+
T Consensus 1 ~~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 1 RKAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcC
Confidence 368999999999999999985
No 136
>PTZ00014 myosin-A; Provisional
Probab=96.14 E-value=0.01 Score=73.00 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003477 691 QAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRW 725 (816)
Q Consensus 691 aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~Rr~ 725 (816)
.++.||++|||++.|++|++.+.++.+||+.+|+|
T Consensus 779 ~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~ 813 (821)
T PTZ00014 779 LVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRH 813 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666666666666555666666666665
No 137
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=95.89 E-value=0.0094 Score=40.59 Aligned_cols=21 Identities=57% Similarity=0.868 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhhHHHHHHHH
Q 003477 689 RRQAIKIQAAFRGFQVRKQYG 709 (816)
Q Consensus 689 r~aai~IQa~~Rg~~~Rk~y~ 709 (816)
..++++||++|||+++|++|+
T Consensus 3 ~~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 3 TRAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 457888888888888888773
No 138
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.68 E-value=0.016 Score=69.33 Aligned_cols=93 Identities=16% Similarity=0.069 Sum_probs=72.7
Q ss_pred CCCCCccCcHHHHHHHcCCcHHHHHHHHHc-CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCc----------c
Q 003477 429 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD----------F 497 (816)
Q Consensus 429 ~~~~~~g~t~L~~Aa~~~~l~~~lv~~Ll~-ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin----------~ 497 (816)
+....-|++.|+.|..+.+++ ++++|++ +... ..+|-+|...|+.++|++++.+-.... .
T Consensus 56 nc~d~lGr~al~iai~nenle--~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~ 126 (822)
T KOG3609|consen 56 NCRDPLGRLALHIAIDNENLE--LQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSP 126 (822)
T ss_pred hccChHhhhceecccccccHH--HHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcc
Confidence 333455889999998888888 7888776 3333 357788899999999999997643321 2
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 003477 498 RDKYGWTALHWAAYYGREKMVVDLLSAGAKPNL 530 (816)
Q Consensus 498 ~D~~G~TpLh~Aa~~G~~eiV~lLL~~GAd~n~ 530 (816)
.-.-+-|||.+||..++.||+++||.+|+.+..
T Consensus 127 ~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 127 HFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred cCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 223578999999999999999999999999876
No 139
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=95.67 E-value=0.12 Score=65.13 Aligned_cols=145 Identities=19% Similarity=0.181 Sum_probs=92.3
Q ss_pred HHHHHHHhhhhHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhhHHHHHHHH---------HHHHHHHHHHHHHHHHHHHH
Q 003477 617 ARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMA---------AAARIQHRFRSWKVRKEFLN 687 (816)
Q Consensus 617 i~IQ~~~R~~~~R~r~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rk~~~---------aai~IQa~~Rg~~~Rk~~~~ 687 (816)
.+.++.+|+++.+....- ..++..-....-+..|...|+...+.... --.++|+..||+..|.+|..
T Consensus 481 ~k~~~~~~~~l~~~~~~~----~~ee~~~~~~~~is~q~~v~~i~~~~~l~~~~~s~~~s~~~~~qa~~rg~~~r~~~~~ 556 (1401)
T KOG2128|consen 481 MKWLAYIYGNLVREAKKW----LLEELHFEYSSLISLQALVRGIVLRSALFSLYPSLGKSEKLRIQASERGFSTRNKFRS 556 (1401)
T ss_pred hhhHHHhhhhhhhhhhcc----ccHHHHHHHHHHhhHHHHhhhhHHHhhHHHHhhhhccccchhhhhhccccchHHHHHh
Confidence 345556666665543321 12222233333344666666665554311 23455999999998887755
Q ss_pred HHH-------HHHHHHHHHhhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCCCchhhH
Q 003477 688 MRR-------QAIKIQAAFRGFQV----RKQYGKILWSVGVLEKAILRWRLKRKGFRGLQVDRVEVEAVSDPNHEGDAEE 756 (816)
Q Consensus 688 ~r~-------aai~IQa~~Rg~~~----Rk~y~~~~~aa~~IQ~~~Rr~r~~r~~~r~lr~~~~~~~~~~~Q~~~~~~~~ 756 (816)
... .+..||+.|||+.. ..........++.+|+..|+. ..|+.+
T Consensus 557 ~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~-lsrk~~------------------------ 611 (1401)
T KOG2128|consen 557 RLDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGA-LSRKKY------------------------ 611 (1401)
T ss_pred hhhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHH-HHHhhH------------------------
Confidence 432 78899999999985 111233344788999999988 444333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 003477 757 DFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMK 794 (816)
Q Consensus 757 ~~l~~~Rkq~e~~~~~Av~~IQs~~R~~~aR~qyrrlk 794 (816)
.+ +.+.+.....+++.||+.+|...+|..|+.+.
T Consensus 612 --~~--~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~ 645 (1401)
T KOG2128|consen 612 --SR--KLQYFKDNMTKIIKIQSKIRKFPNRKDYKLLF 645 (1401)
T ss_pred --HH--HHHHHHHhhhhHHHHHHHHHhcccchHHHHHh
Confidence 11 34555567789999999999999999999883
No 140
>PTZ00014 myosin-A; Provisional
Probab=95.37 E-value=0.037 Score=68.26 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 003477 668 AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQ 707 (816)
Q Consensus 668 aai~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~ 707 (816)
.++.||++||||+.|++|++++.+++.||++||+|+.++.
T Consensus 779 ~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~ 818 (821)
T PTZ00014 779 LVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE 818 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6889999999999999999999999999999999998875
No 141
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.22 E-value=0.026 Score=36.94 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=26.3
Q ss_pred CCCchHHHHHHcCChhhHHHHHhCCCCCc
Q 003477 468 HGQGVIHLCAMLGYTWAILLFSWSGLSLD 496 (816)
Q Consensus 468 ~G~TpLHlAa~~G~~~iv~~LL~~Gadin 496 (816)
.|.||||+|+..|..++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999998765
No 142
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=95.14 E-value=0.059 Score=67.64 Aligned_cols=90 Identities=26% Similarity=0.277 Sum_probs=50.7
Q ss_pred HHHHHHhhhhHHHHHHHHhcCChHHHHH-HHHHHHHHHHhhhhHHH---HH-----HHHHHHHHHHHHHHHHHHHHHHHH
Q 003477 618 RIQAAFREHSLKVQTKAIRFSSPEEEAQ-NIIAALKIQHAFRNFEV---RK-----KMAAAARIQHRFRSWKVRKEFLNM 688 (816)
Q Consensus 618 ~IQ~~~R~~~~R~r~~~~~~~~~~~~~~-~~~Aa~~IQ~~~R~~~~---rk-----~~~aai~IQa~~Rg~~~Rk~~~~~ 688 (816)
++|+..|++..|..+...- .+.+ .......||..||++.. +. ....++.+|++.||...|+.+.+.
T Consensus 540 ~~qa~~rg~~~r~~~~~~~-----~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~ 614 (1401)
T KOG2128|consen 540 RIQASERGFSTRNKFRSRL-----DFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRK 614 (1401)
T ss_pred hhhhhccccchHHHHHhhh-----hHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHH
Confidence 3466666666665553322 1222 33455666666666552 11 122566677777777766666544
Q ss_pred HH-------HHHHHHHHHhhHHHHHHHHHHH
Q 003477 689 RR-------QAIKIQAAFRGFQVRKQYGKIL 712 (816)
Q Consensus 689 r~-------aai~IQa~~Rg~~~Rk~y~~~~ 712 (816)
.+ .+++||+++|+.+.|+.|+.+.
T Consensus 615 ~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L~ 645 (1401)
T KOG2128|consen 615 LQYFKDNMTKIIKIQSKIRKFPNRKDYKLLF 645 (1401)
T ss_pred HHHHHHhhhhHHHHHHHHHhcccchHHHHHh
Confidence 32 6666777777777777665554
No 143
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=94.91 E-value=0.027 Score=38.29 Aligned_cols=20 Identities=35% Similarity=0.474 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003477 667 AAAARIQHRFRSWKVRKEFL 686 (816)
Q Consensus 667 ~aai~IQa~~Rg~~~Rk~~~ 686 (816)
.+|+.||+.|||++.|++|.
T Consensus 4 ~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 4 RAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 57888999999999998873
No 144
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.04 E-value=0.065 Score=60.66 Aligned_cols=59 Identities=20% Similarity=0.134 Sum_probs=48.4
Q ss_pred HHHHHHc-CCCCCc------cCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHH
Q 003477 452 LLERVVE-GSKTTE------YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 510 (816)
Q Consensus 452 lv~~Ll~-ga~in~------~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa 510 (816)
.++.|.+ +..+|. .+..--|+||+|+..|...+|..||+.|+|+-.+|..|.||..+++
T Consensus 406 ~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 406 SIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred HHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 4555555 444433 4455679999999999999999999999999999999999998876
No 145
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=93.18 E-value=0.12 Score=64.34 Aligned_cols=89 Identities=17% Similarity=0.133 Sum_probs=72.0
Q ss_pred CCCceeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCCc-chhHHhhhcCc-ceecCCCCC-CCceeeeec
Q 003477 260 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGV-YRCFLPPHS-PGLFLLYMS 336 (816)
Q Consensus 260 ~~~~~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v-~V~a~ll~~gv-lrC~~Pph~-~G~V~l~v~ 336 (816)
.-|.+.|..+.|.||+..|||.|+++|+.+.. ...-.|++|.. +-+....+++. ++|..++.. ++..++.|.
T Consensus 139 s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~v~ 213 (1025)
T KOG3610|consen 139 SLQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVLVS 213 (1025)
T ss_pred eecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCccceEEE
Confidence 46788999999999999999999999999876 56788999998 66666678887 999999984 477888888
Q ss_pred cCCCCcccccccccCCC
Q 003477 337 LDGHKPISQVLNFEYRS 353 (816)
Q Consensus 337 ~~~~~~~s~~~~Fey~~ 353 (816)
.++...-.....|+|..
T Consensus 214 f~~~~~~~~~~~f~y~~ 230 (1025)
T KOG3610|consen 214 FDRTPQKLTPLAFNYTA 230 (1025)
T ss_pred ecccccccCCCCccccc
Confidence 87664333357788776
No 146
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=89.82 E-value=0.6 Score=42.62 Aligned_cols=86 Identities=17% Similarity=0.136 Sum_probs=59.1
Q ss_pred ceeeEeecCCCCCCCCCeEEEEEccCCCCcccC---C-----CCcEEEEcCCcchhHHhhhcCcceecCCCC------CC
Q 003477 263 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHL---S-----KSNMFCVCGEVRVPAEFVQAGVYRCFLPPH------SP 328 (816)
Q Consensus 263 ~~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~---~-----~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph------~~ 328 (816)
++.|.+.|-.-++..||-||.++|..+..-..+ + ...|. ++|++. .+.++...|+|-+||= .|
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~kDikV~F~E~~~dG~~~WE-~~a~f~--~~~~hQ~aIvf~tPpY~~~~I~~p 77 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLKDSKVVFQEKGQDGEAQWE-AEATID--KEKSHQNHLVVEVPPYHNKHVAAP 77 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCCCCEEEEEEeCCCCccceE-EEEEeC--hHhceeeeEEEecCCCCCCCcCCc
Confidence 578999999999999999999999866431111 0 11232 234443 3555679999999985 45
Q ss_pred CceeeeeccCCCCcccccccccCC
Q 003477 329 GLFLLYMSLDGHKPISQVLNFEYR 352 (816)
Q Consensus 329 G~V~l~v~~~~~~~~s~~~~Fey~ 352 (816)
=.|.|++.... -..|+...|+|.
T Consensus 78 V~V~~~l~~~~-~~~S~~~~FtY~ 100 (101)
T cd01178 78 VQVQFYVVNGK-RKRSQPQTFTYT 100 (101)
T ss_pred eEEEEEEEcCC-CCcCCCCCcEec
Confidence 56667775432 356899999985
No 147
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=86.35 E-value=0.59 Score=41.44 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=50.1
Q ss_pred eEEEEEccCCCCcccCCCCcEEEEcCCcchhHHhhhcCcceecCCCC-----------CCCceeeeeccCCCCccccccc
Q 003477 280 TKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-----------SPGLFLLYMSLDGHKPISQVLN 348 (816)
Q Consensus 280 ~kVlI~G~f~~~~~~~~~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph-----------~~G~V~l~v~~~~~~~~s~~~~ 348 (816)
.-+-++|.+|.. ++-+-||++++-+.+=..-.|.|.+|+- +|..||+.+.-+.+..-+--..
T Consensus 20 amlEl~GenF~p-------nLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTP-------NLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCC-------CceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 567799999876 7999999999887777778899999975 3667777776665554455566
Q ss_pred ccCC
Q 003477 349 FEYR 352 (816)
Q Consensus 349 Fey~ 352 (816)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 6664
No 148
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=85.35 E-value=1.4 Score=40.35 Aligned_cols=81 Identities=16% Similarity=0.141 Sum_probs=59.7
Q ss_pred eeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCC-------cch-----hHHhhhcCcceecCCCC------
Q 003477 265 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-------VRV-----PAEFVQAGVYRCFLPPH------ 326 (816)
Q Consensus 265 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~-------v~V-----~a~ll~~gvlrC~~Pph------ 326 (816)
.|..+|-.-++..||-+|.++|..+.- ...-+.|++ .|. ++.+ ....++|-.||=
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~k------~dikV~F~e~~~g~~~WE~~~~f~~~dv-~q~aiv~~tP~y~~~~i~ 74 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVNK------PDIKVWFGEKGPGETVWEAEAMFRQEDV-RQVAIVFKTPPYHNKWIT 74 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCCC------CCCEEEEEecCCCCCeEEEEEEECHHHc-eEeEEEecCCCcCCCCcc
Confidence 588899999999999999999986542 246677777 332 2223 667788888875
Q ss_pred CCCceeeeeccCCCCcccccccccCC
Q 003477 327 SPGLFLLYMSLDGHKPISQVLNFEYR 352 (816)
Q Consensus 327 ~~G~V~l~v~~~~~~~~s~~~~Fey~ 352 (816)
.|=.|++++........|+...|+|.
T Consensus 75 ~pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 75 RPVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred ccEEEEEEEEeCCCCeecCCcCeEEc
Confidence 35566777777655578899999986
No 149
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=82.88 E-value=3.1 Score=43.27 Aligned_cols=95 Identities=14% Similarity=0.040 Sum_probs=65.4
Q ss_pred CCchHHHHHHcCChhhHHHHHhCCCCCccccC----CCCcHHHHHHHc--CCHHHHHHHHhcC-CCCCCCCCCCCCCCCC
Q 003477 469 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK----YGWTALHWAAYY--GREKMVVDLLSAG-AKPNLVTDPTSQNPGG 541 (816)
Q Consensus 469 G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~----~G~TpLh~Aa~~--G~~eiV~lLL~~G-Ad~n~~td~~~~d~~G 541 (816)
-.++|-+|...+..+++-+|+.+- +....|. .+.--+-++... -...+.+..|..| +++|. +-.+-+.|
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~---~F~~~NSG 254 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNK---KFQKVNSG 254 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccch---hhhccCCc
Confidence 457788888778888888888641 1111111 122234444332 3567888888888 56665 33356789
Q ss_pred CCHHHHHHHcCCHHHHHHHHhhhhhc
Q 003477 542 LNAADIASKKGFDGLAAFLSEQALVA 567 (816)
Q Consensus 542 ~TpL~lA~~~G~~~iv~lLle~Ga~~ 567 (816)
.|-|+-|.+.++.+++.+|+++||..
T Consensus 255 dtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred chHHHhHHhcCcHHHHHHHHHcCccc
Confidence 99999999999999999999999854
No 150
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=82.85 E-value=3.2 Score=37.97 Aligned_cols=85 Identities=9% Similarity=0.067 Sum_probs=55.7
Q ss_pred eeEeecCCCCCCCCCeEEEEEccCCCCcccCC---------CCcEEEEcCCcchhHHhhhcCcceecCCCC------CCC
Q 003477 265 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLS---------KSNMFCVCGEVRVPAEFVQAGVYRCFLPPH------SPG 329 (816)
Q Consensus 265 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~---------~~~~~c~FG~v~V~a~ll~~gvlrC~~Pph------~~G 329 (816)
.|.+++=.-|+..||.||.+++....- ++.. ...|.. ||++. ++.+-....+++-+||= .|=
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~K-~dI~VrF~e~~~~~~~We~-~g~f~-~~dVH~Q~AIvfkTPpY~~~~I~~pV 78 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQK-EDIQVRFFEEDEEETVWEA-FGDFS-QTDVHRQYAIVFRTPPYHDPDITEPV 78 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccCC-CCCEEEEEEcCCCCCceEE-EeeEC-HHHcccceEEEEeCCCCCCCcCCCce
Confidence 699999999999999999999975532 1110 112432 33332 33444556788888875 344
Q ss_pred ceeeeeccCCCCcccccccccCC
Q 003477 330 LFLLYMSLDGHKPISQVLNFEYR 352 (816)
Q Consensus 330 ~V~l~v~~~~~~~~s~~~~Fey~ 352 (816)
.|.+++.-......|+...|+|.
T Consensus 79 ~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 79 KVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred EEEEEEEeCCCCCccCCcceEEc
Confidence 55566665544568999999986
No 151
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=78.62 E-value=25 Score=47.60 Aligned_cols=52 Identities=25% Similarity=0.379 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhhhhhh
Q 003477 685 FLNMRRQAIKIQAAFRGFQVRKQYGKILW---SVGVLEKAILRWRLKRKGFRGLQV 737 (816)
Q Consensus 685 ~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~---aa~~IQ~~~Rr~r~~r~~~r~lr~ 737 (816)
-..+..-++.+|+.+|||.+|+.|.+... ++.+||+.+|.| ...+.+.-++.
T Consensus 769 d~~ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~-~~lr~w~W~~L 823 (1930)
T KOG0161|consen 769 DEKLSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAY-LKLRTWPWWRL 823 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCHHHHH
Confidence 33444567778888888888887766554 777888888877 55555544443
No 152
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=77.55 E-value=3.1 Score=48.88 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=35.9
Q ss_pred CCCCCccCcCCCchHHHHHHcCChhhHHHHHhCCCCCccccCCCCc
Q 003477 459 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT 504 (816)
Q Consensus 459 ga~in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~T 504 (816)
++.++..|..|.+|+|+++..|...+++.++....+++..-..|.+
T Consensus 419 ~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 419 GAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred cCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 7778888999999999999999999999888766555544444433
No 153
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=74.95 E-value=7.8 Score=46.38 Aligned_cols=43 Identities=30% Similarity=0.515 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 003477 667 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKIL 712 (816)
Q Consensus 667 ~aai~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~ 712 (816)
.-|.+||+.||.+.+|++|.++|.-++++ .-|.+.|++|--.+
T Consensus 697 ~~A~~IQkAWRrfv~rrky~k~ree~t~l---l~gKKeRRr~Si~R 739 (1106)
T KOG0162|consen 697 GMARRIQKAWRRFVARRKYEKMREEATKL---LLGKKERRRYSINR 739 (1106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHHH
Confidence 37889999999999999999999877765 34677777775543
No 154
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=74.55 E-value=62 Score=44.01 Aligned_cols=41 Identities=22% Similarity=0.292 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhHHHHHHH
Q 003477 668 AAARIQHRFRSWKVRKEFLNMRR---QAIKIQAAFRGFQVRKQY 708 (816)
Q Consensus 668 aai~IQa~~Rg~~~Rk~~~~~r~---aai~IQa~~Rg~~~Rk~y 708 (816)
-.+.+|+.+|||.+|+.|.+... ++..||+.+|.|...+.+
T Consensus 775 ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~~lr~w 818 (1930)
T KOG0161|consen 775 IITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYLKLRTW 818 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 57789999999999999977654 999999999998766543
No 155
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=74.00 E-value=4.6 Score=42.09 Aligned_cols=91 Identities=19% Similarity=0.098 Sum_probs=58.3
Q ss_pred CcHHHHHHHcCCcHHHHHHHHHcCCCCCccCc----CCCchHHHHHH--cCChhhHHHHHhCC-CCCccc---cCCCCcH
Q 003477 436 KDSFFELTLKSKLKEWLLERVVEGSKTTEYDV----HGQGVIHLCAM--LGYTWAILLFSWSG-LSLDFR---DKYGWTA 505 (816)
Q Consensus 436 ~t~L~~Aa~~~~l~~~lv~~Ll~ga~in~~d~----~G~TpLHlAa~--~G~~~iv~~LL~~G-adin~~---D~~G~Tp 505 (816)
.+++.++.-+++-. +..+|+..-+....|- .+.--+-++.. .....+++.+|.+| +++|.+ -+.|.|-
T Consensus 180 ~~Am~~si~~~K~d--va~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtM 257 (284)
T PF06128_consen 180 HQAMWLSIGNAKED--VALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTM 257 (284)
T ss_pred HHHHHHHhcccHHH--HHHHHHhhcceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchH
Confidence 34555555333332 5666665333333222 12223333322 23467888889988 778854 4579999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCC
Q 003477 506 LHWAAYYGREKMVVDLLSAGAKP 528 (816)
Q Consensus 506 Lh~Aa~~G~~eiV~lLL~~GAd~ 528 (816)
|.-|..+++.+++.+||++||-.
T Consensus 258 LDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 258 LDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HHhHHhcCcHHHHHHHHHcCccc
Confidence 99999999999999999999854
No 156
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=73.13 E-value=2.3e+02 Score=34.74 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=24.7
Q ss_pred HHHHHhhhhHHHHHHHHhcCChH------HHHHHHHHHHHHHHhhhhHHHHHHH
Q 003477 619 IQAAFREHSLKVQTKAIRFSSPE------EEAQNIIAALKIQHAFRNFEVRKKM 666 (816)
Q Consensus 619 IQ~~~R~~~~R~r~~~~~~~~~~------~~~~~~~Aa~~IQ~~~R~~~~rk~~ 666 (816)
|-+....|+.+.|..+.+++... .-+-+..+++++|++.|+|++|+++
T Consensus 779 lv~kVn~WLv~sRWkk~q~~a~sVIKLkNkI~yRae~v~k~Q~~~Rg~L~rkr~ 832 (1259)
T KOG0163|consen 779 LVAKVNKWLVRSRWKKSQYGALSVIKLKNKIIYRAECVLKAQRIARGYLARKRH 832 (1259)
T ss_pred HHHHHHHHHHHhHHHHhhhhhhheeehhhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33345667777777776655411 1222333445555555555555543
No 157
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=71.00 E-value=7.9 Score=47.53 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003477 662 VRKKMAAAARIQHRFRSWKVRKEFLNMR 689 (816)
Q Consensus 662 ~rk~~~aai~IQa~~Rg~~~Rk~~~~~r 689 (816)
.||+.++|+.+|+.|||++.|+++...-
T Consensus 25 ~rk~e~~av~vQs~~Rg~~~r~~~~~~~ 52 (1001)
T KOG0942|consen 25 ERKQEKNAVKVQSFWRGFRVRHNQKLLF 52 (1001)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 4555667777777777777777655443
No 158
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=68.69 E-value=13 Score=44.75 Aligned_cols=35 Identities=43% Similarity=0.526 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 003477 662 VRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGF 702 (816)
Q Consensus 662 ~rk~~~aai~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~ 702 (816)
.|++.+||+.||+.+|||..||+++ ++||.-|+..
T Consensus 26 qrrr~~aa~~iq~~lrsyl~Rkk~~------~~I~~e~d~~ 60 (1096)
T KOG4427|consen 26 QRRREAAALFIQRVLRSYLVRKKAQ------IEIQEEFDNL 60 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHh
Confidence 4455668888888888888888764 5566555544
No 159
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=67.78 E-value=5.1 Score=50.48 Aligned_cols=78 Identities=19% Similarity=0.132 Sum_probs=53.6
Q ss_pred CCCceeeEeecCCCCCCCCCeEEEEEccCCCCcccCCCCcEEEEcCC-cchhHHhhhcCcceecCCCCC--CCceeeeec
Q 003477 260 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVPAEFVQAGVYRCFLPPHS--PGLFLLYMS 336 (816)
Q Consensus 260 ~~~~~~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~-v~V~a~ll~~gvlrC~~Pph~--~G~V~l~v~ 336 (816)
.-+.|+|++|+|.-|+.+||+.|+|.|.++...-+....+..+.-.- ..++.+..-..-+.|..-++. ||.|.+.|-
T Consensus 46 ~c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~Va~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~ 125 (1025)
T KOG3610|consen 46 VCPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVKVAGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVG 125 (1025)
T ss_pred ecCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCceEeeeecCCCccccccccceeeccCCCCCCCCceeEEec
Confidence 35688899999999999999999999998866221111122111111 234445555667788888885 799988887
Q ss_pred c
Q 003477 337 L 337 (816)
Q Consensus 337 ~ 337 (816)
.
T Consensus 126 ~ 126 (1025)
T KOG3610|consen 126 V 126 (1025)
T ss_pred c
Confidence 4
No 160
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=65.71 E-value=9.5 Score=46.89 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 003477 766 AEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQ 799 (816)
Q Consensus 766 ~e~~~~~Av~~IQs~~R~~~aR~qyrrlk~~~~~ 799 (816)
.+++.+++++.||+.|||+.+|++.+.+..++--
T Consensus 24 e~rk~e~~av~vQs~~Rg~~~r~~~~~~~R~~fd 57 (1001)
T KOG0942|consen 24 EERKQEKNAVKVQSFWRGFRVRHNQKLLFREEFD 57 (1001)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557788999999999999999988887655433
No 161
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=62.54 E-value=18 Score=43.65 Aligned_cols=36 Identities=39% Similarity=0.460 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 003477 643 EAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWK 680 (816)
Q Consensus 643 ~~~~~~Aa~~IQ~~~R~~~~rk~~~aai~IQa~~Rg~~ 680 (816)
.+++++||..||+.+|+|..|++ +++.||.-|+-..
T Consensus 26 qrrr~~aa~~iq~~lrsyl~Rkk--~~~~I~~e~d~~f 61 (1096)
T KOG4427|consen 26 QRRREAAALFIQRVLRSYLVRKK--AQIEIQEEFDNLF 61 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhh
Confidence 35678999999999999999887 6778887777653
No 162
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=54.93 E-value=56 Score=33.33 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=38.2
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Q 003477 506 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 562 (816)
Q Consensus 506 Lh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle 562 (816)
|.+|+..|-...+.-.|++|.+++. ++|..|+..+|..|..+++.
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------------HHHHHHHHhhHHHHHHHhhc
Confidence 6789999999988888899888652 78999999999999988864
No 163
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=54.63 E-value=5e+02 Score=32.10 Aligned_cols=24 Identities=17% Similarity=0.105 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHHH
Q 003477 611 TAAEAAARIQAAFREHSLKVQTKA 634 (816)
Q Consensus 611 ~~~~AAi~IQ~~~R~~~~R~r~~~ 634 (816)
-+..+++++|++.|||+.|+|+..
T Consensus 811 yRae~v~k~Q~~~Rg~L~rkr~~~ 834 (1259)
T KOG0163|consen 811 YRAECVLKAQRIARGYLARKRHRP 834 (1259)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhch
Confidence 346788999999999999998854
No 164
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=51.89 E-value=27 Score=39.83 Aligned_cols=21 Identities=33% Similarity=0.419 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 003477 666 MAAAARIQHRFRSWKVRKEFL 686 (816)
Q Consensus 666 ~~aai~IQa~~Rg~~~Rk~~~ 686 (816)
.+||+.||+|||++.+|.+.+
T Consensus 17 ikaAilIQkWYRr~~ARle~r 37 (631)
T KOG0377|consen 17 IKAAILIQKWYRRYEARLEAR 37 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 357777777777777776643
No 165
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=49.52 E-value=22 Score=36.08 Aligned_cols=46 Identities=20% Similarity=0.140 Sum_probs=41.2
Q ss_pred hHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHh
Q 003477 472 VIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS 523 (816)
Q Consensus 472 pLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~ 523 (816)
-|.+|+..|....+.-.+++|-+++. ++|..|+.++|.+++.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 36789999999999999999998875 79999999999999998874
No 166
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=49.45 E-value=25 Score=30.17 Aligned_cols=45 Identities=13% Similarity=0.038 Sum_probs=20.3
Q ss_pred hHHHHHHcCChhhHHHHHhCCCCCccccCCCCcHHHHHHHcCCHHHHHHHHh
Q 003477 472 VIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS 523 (816)
Q Consensus 472 pLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~G~~eiV~lLL~ 523 (816)
.|..|...|+.++++.+++.+ .++ ...|..|...-+.+++++|++
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~ 53 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIE 53 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHH
Confidence 344455555555555444332 111 234555555555555555544
No 167
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=47.04 E-value=37 Score=41.01 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 003477 757 DFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRRMKLAHDQ 799 (816)
Q Consensus 757 ~~l~~~Rkq~e~~~~~Av~~IQs~~R~~~aR~qyrrlk~~~~~ 799 (816)
-.+.+.|.+.+. --+.+||..||.+.+|++|.+++.+..+
T Consensus 685 F~LEemRer~~d---~~A~~IQkAWRrfv~rrky~k~ree~t~ 724 (1106)
T KOG0162|consen 685 FLLEEMRERKWD---GMARRIQKAWRRFVARRKYEKMREEATK 724 (1106)
T ss_pred HHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555543 3568999999999999999999888655
No 168
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=45.44 E-value=27 Score=39.78 Aligned_cols=23 Identities=26% Similarity=0.302 Sum_probs=14.5
Q ss_pred hhhHHHHHHHHHHHhhhhHHHHH
Q 003477 610 RTAAEAAARIQAAFREHSLKVQT 632 (816)
Q Consensus 610 r~~~~AAi~IQ~~~R~~~~R~r~ 632 (816)
.++-+||+.||+|||++.+|.+.
T Consensus 14 ~raikaAilIQkWYRr~~ARle~ 36 (631)
T KOG0377|consen 14 TRAIKAAILIQKWYRRYEARLEA 36 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777777777766443
No 169
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=38.13 E-value=41 Score=28.83 Aligned_cols=46 Identities=24% Similarity=0.304 Sum_probs=28.9
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhh
Q 003477 505 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 563 (816)
Q Consensus 505 pLh~Aa~~G~~eiV~lLL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~ 563 (816)
-|..|...|+.++++.+++.+ .++. ..+..|...-+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~~------------~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPDN------------DCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccHH------------HHHHHHHHHhhHHHHHHHHHh
Confidence 456677777777777666554 3321 356667776667777776665
No 170
>KOG0165 consensus Microtubule-associated protein Asp [Cytoskeleton]
Probab=37.78 E-value=9e+02 Score=30.13 Aligned_cols=117 Identities=21% Similarity=0.242 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------hh-hh
Q 003477 668 AAARIQHRFRSWKVRKEFLNMRRQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRWRLKRKGFRGL-------QV-DR 739 (816)
Q Consensus 668 aai~IQa~~Rg~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~Rr~r~~r~~~r~l-------r~-~~ 739 (816)
++..+|..-..+-.+..|-...+++..+|++.+-|+.++.|.-...++...|+..-.. .+.-....+ |. ..
T Consensus 172 ~~~~~~~~~~~~~~~~DfG~q~~a~~tl~Sy~~~WL~~~L~~IF~~~~~~~~khlM~k-L~~f~s~~~FS~ptmlk~y~~ 250 (1023)
T KOG0165|consen 172 AALRIQFFLQMAVYRRDFGQQKRAAITLQSYFRTWLTRKLFLIFRKAAVVLQKHLMHK-LRAFLSAKHFSQPTMLKVYLQ 250 (1023)
T ss_pred HHhhhHHHhhhchhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhccchhcCcHHHHHH-HHHHHHHHHhcCchHHHHHHH
Confidence 5666666666666677777777788888888888888877755555444444332111 100000000 00 00
Q ss_pred hhhhccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 003477 740 VEVEAVSDPNHEGDAEEDFYRASRKQAEERVERSVVRVQSMFRSKKAQEEYRR 792 (816)
Q Consensus 740 ~~~~~~~~Q~~~~~~~~~~l~~~Rkq~e~~~~~Av~~IQs~~R~~~aR~qyrr 792 (816)
..-+..++|. ..+..+. +....+...-+..||+.|+.+.+-.-|+=
T Consensus 251 ~~s~~~ii~~----~~kEAL~---k~~L~~i~~L~~~I~~A~~~~~~~~~~~I 296 (1023)
T KOG0165|consen 251 IRSSVIIIQA----RSKEALQ---KRKLQEIKNLTIKIQAAWRRYRAKKYLCI 296 (1023)
T ss_pred hccCceeecc----chHHHHH---HHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 0001112221 2222332 44445677788899999998877665543
No 171
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility]
Probab=36.38 E-value=34 Score=43.71 Aligned_cols=84 Identities=18% Similarity=0.065 Sum_probs=66.7
Q ss_pred HHHHHHHHhhhhHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhhHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q 003477 616 AARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK-------KMAAAARIQHRFRSWKVRKEFLNM 688 (816)
Q Consensus 616 Ai~IQ~~~R~~~~R~r~~~~~~~~~~~~~~~~~Aa~~IQ~~~R~~~~rk-------~~~aai~IQa~~Rg~~~Rk~~~~~ 688 (816)
+...|++++....++.+.++. .+.+.+| |+.+..++ ...+++-+|..|+.+..+..++..
T Consensus 922 ~~~k~~~~~~~~~~~~~~~~~-----------~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1062)
T KOG4229|consen 922 SFFKQKWFRLTLERKGLLRLS-----------EGSVLIQ--RLELLGRRTCPVAGAPAVAAASLQNAWPVYRELSGRLGL 988 (1062)
T ss_pred HHHHHHHHHhhhccccchhhc-----------chhHHHH--HHHHhcccCCcchhhhhhhhhhccccchhhhhhhhhHHH
Confidence 566688888877777776666 6677777 66666655 345889999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Q 003477 689 RRQAIKIQAAFRGFQVRKQYGKIL 712 (816)
Q Consensus 689 r~aai~IQa~~Rg~~~Rk~y~~~~ 712 (816)
|+.++.+|..+++...++.+....
T Consensus 989 ~~s~~~~~~~~~~~~~~~~~~~~~ 1012 (1062)
T KOG4229|consen 989 RRSFIADQSPRSRPAYTMIFAADK 1012 (1062)
T ss_pred hhhhcchhcccccchhhhhHHHhh
Confidence 999999999999998888775543
No 172
>KOG0165 consensus Microtubule-associated protein Asp [Cytoskeleton]
Probab=32.09 E-value=4.6e+02 Score=32.44 Aligned_cols=36 Identities=6% Similarity=-0.235 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003477 690 RQAIKIQAAFRGFQVRKQYGKILWSVGVLEKAILRW 725 (816)
Q Consensus 690 ~aai~IQa~~Rg~~~Rk~y~~~~~aa~~IQ~~~Rr~ 725 (816)
.++..+|...||.-+|..++-...+...||+.+++|
T Consensus 627 ~~~~~~~~n~~~~~a~sie~~~~~~~~~Lr~~~~~~ 662 (1023)
T KOG0165|consen 627 RLSPLCCENMAQSGAISIEKIFVLIRSCLRSIPCME 662 (1023)
T ss_pred HhhHHHhhhhhhhchhhHHHHHHHHHhhhccchHHH
Confidence 366777888888887777766666777777777777
No 173
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=31.72 E-value=1.1e+02 Score=29.95 Aligned_cols=67 Identities=16% Similarity=0.196 Sum_probs=48.3
Q ss_pred ecCCCCCCCCCeEEEEEccCCCCcccCC-CCcEEEEcCC----c-chhHHhhhcCcceecCCCC---CCCceeeeeccCC
Q 003477 269 VSPAWAFSNEKTKILVTGFFHKDCLHLS-KSNMFCVCGE----V-RVPAEFVQAGVYRCFLPPH---SPGLFLLYMSLDG 339 (816)
Q Consensus 269 ~sP~w~~~~gg~kVlI~G~f~~~~~~~~-~~~~~c~FG~----v-~V~a~ll~~gvlrC~~Pph---~~G~V~l~v~~~~ 339 (816)
+.|+-=.++.. ||.|+=.-- +. .....+.|-. . .+++.++.+-|++..+|.. -+|.|.+.|.|+|
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~-----l~~~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g 76 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDP-----LDEEDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDG 76 (142)
T ss_pred ecCceeecCCC-EEEEEEeCC-----CCCCCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECC
Confidence 34666667777 887774321 21 2245565543 2 5778889999999999999 9999999999988
Q ss_pred CC
Q 003477 340 HK 341 (816)
Q Consensus 340 ~~ 341 (816)
-.
T Consensus 77 ~~ 78 (142)
T PF14545_consen 77 VS 78 (142)
T ss_pred EE
Confidence 53
No 174
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=29.77 E-value=39 Score=35.37 Aligned_cols=45 Identities=22% Similarity=0.166 Sum_probs=37.3
Q ss_pred HHhcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhhhhhccccC
Q 003477 521 LLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 571 (816)
Q Consensus 521 LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~G~~~iv~lLle~Ga~~~l~~ 571 (816)
|+++||-.|. .|....||=++|...|+..+-+.|++.|+...+--
T Consensus 1 lle~ga~wn~------id~~n~t~gd~a~ern~~rly~~lv~~gv~Selll 45 (271)
T KOG1709|consen 1 LLEYGAGWNF------IDYENKTVGDLALERNQSRLYRRLVEAGVPSELLL 45 (271)
T ss_pred CcccCCCccc------cChhhCCchHHHHHccHHHHHHHHHHcCCchhhhh
Confidence 4678888888 77888999999999999999999999988765433
No 175
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers. Voltage-dependent Ca2+ channels (VDCC) are a family of molecules that allow cells to couple electrical activity to intracellular Ca2+ signalling. The opening and closing of these channels by depolarizing stimuli, such as action potentials, allows Ca2+ ions to enter neurons down a steep electrochemical gradient, producing transient intracellular Ca2+ signals. Many of the processes that occur in neurons, including transmitter release, gene transcription and metabolism are controlled by Ca2+ influx occurring simultaneously at different cellular locales. The pore is formed by the alpha-1 subunit which incorporates the conduction pore, the voltage sensor and gating apparatus, and the known sites of channel regulation by second messengers, drugs, and toxins []. The activity of this pore is modulated by 4 tightly-coupled subunits: an intracellular beta subunit; a transmembrane gamma subunit; and a disulphide-linked complex of alpha-2 and delta subunits, which are proteolytically cleaved from the same gene product. Properties of the protein including gating voltage-dependence, G protein modulation and kinase susceptibility can be influenced by these subunits. Voltage-gated calcium channels are classified as T, L, N, P, Q and R, and are distinguished by their sensitivity to pharmacological blocks, single-channel conductance kinetics, and voltage-dependence. On the basis of their voltage activation properties, the voltage-gated calcium classes can be further divided into two broad groups: the low (T-type) and high (L, N, P, Q and R-type) threshold-activated channels. The voltage-gated calcium channel alpha 1 subunit contains an IQ domain, named for its isoleucine-glutamine (IQ) motif, which interacts with hydrophobic pockets of Ca2+/calmodulin []. The interaction regulates two self-regulatory calcium dependent feedback mechanisms, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). ; PDB: 3OXQ_F 2F3Z_B 3G43_E 2F3Y_B 2BE6_D 3DVM_B 3BXK_D 2VAY_B 3DVK_B 3BXL_B ....
Probab=29.01 E-value=70 Score=23.63 Aligned_cols=18 Identities=50% Similarity=0.571 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003477 668 AAARIQHRFRSWKVRKEF 685 (816)
Q Consensus 668 aai~IQa~~Rg~~~Rk~~ 685 (816)
|+..||-.||.++.|+.-
T Consensus 11 At~lI~dyfr~~K~rk~~ 28 (35)
T PF08763_consen 11 ATLLIQDYFRQFKKRKEQ 28 (35)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777888888888877753
No 176
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=28.10 E-value=5.6e+02 Score=32.18 Aligned_cols=11 Identities=27% Similarity=0.368 Sum_probs=8.0
Q ss_pred HHHHHHHHHHH
Q 003477 668 AAARIQHRFRS 678 (816)
Q Consensus 668 aai~IQa~~Rg 678 (816)
.+.+||..++|
T Consensus 351 ~~erlqs~i~g 361 (1054)
T COG5261 351 FAERLQSNING 361 (1054)
T ss_pred HHHHHHHHHhC
Confidence 66777777777
No 177
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=22.01 E-value=71 Score=37.69 Aligned_cols=18 Identities=33% Similarity=0.294 Sum_probs=11.1
Q ss_pred HHHHHHHHHHhhhhHHHH
Q 003477 646 NIIAALKIQHAFRNFEVR 663 (816)
Q Consensus 646 ~~~Aa~~IQ~~~R~~~~r 663 (816)
+..||..||.+||.|.+.
T Consensus 339 r~pAA~LIQc~WR~yaa~ 356 (654)
T KOG1419|consen 339 RNPAASLIQCAWRYYAAE 356 (654)
T ss_pred cchHHHHHHHHHHHHhcc
Confidence 345667777777666544
No 178
>PRK14537 50S ribosomal protein L20/unknown domain fusion protein; Provisional
Probab=21.71 E-value=2.1e+02 Score=29.98 Aligned_cols=11 Identities=18% Similarity=-0.043 Sum_probs=5.3
Q ss_pred HHHHHHHHhhH
Q 003477 692 AIKIQAAFRGF 702 (816)
Q Consensus 692 ai~IQa~~Rg~ 702 (816)
+++|-+.+|.+
T Consensus 62 ItRINAAaR~~ 72 (230)
T PRK14537 62 ISRINAGAMLC 72 (230)
T ss_pred HHHHHHHHHHc
Confidence 44555555433
Done!