Query 003481
Match_columns 816
No_of_seqs 772 out of 3397
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 00:15:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003481.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003481hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 7.3E-51 1.6E-55 447.6 25.0 275 456-739 61-353 (361)
2 KOG0192 Tyrosine kinase specif 100.0 7.6E-45 1.6E-49 397.2 22.5 249 475-740 46-305 (362)
3 KOG0581 Mitogen-activated prot 100.0 7E-45 1.5E-49 379.2 16.3 250 460-736 76-338 (364)
4 KOG0591 NIMA (never in mitosis 100.0 4.2E-45 9.1E-50 364.9 12.5 253 471-737 20-285 (375)
5 KOG0575 Polo-like serine/threo 100.0 4.3E-44 9.4E-49 392.9 20.4 246 470-736 18-272 (592)
6 KOG0595 Serine/threonine-prote 100.0 1.3E-43 2.8E-48 372.3 18.9 248 470-736 10-271 (429)
7 KOG0615 Serine/threonine prote 100.0 3E-44 6.5E-49 376.1 13.2 248 468-733 170-437 (475)
8 KOG0598 Ribosomal protein S6 k 100.0 1.2E-42 2.6E-47 362.4 16.3 238 469-726 24-270 (357)
9 KOG0197 Tyrosine kinases [Sign 100.0 1.9E-42 4.1E-47 376.9 15.7 249 473-740 209-463 (468)
10 KOG0605 NDR and related serine 100.0 1.5E-40 3.2E-45 359.7 25.1 246 470-727 141-436 (550)
11 KOG0592 3-phosphoinositide-dep 100.0 1.7E-41 3.6E-46 366.3 15.0 251 470-733 73-338 (604)
12 KOG0198 MEKK and related serin 100.0 9.5E-41 2.1E-45 354.5 16.7 257 469-738 16-281 (313)
13 KOG0616 cAMP-dependent protein 100.0 1.4E-40 2.9E-45 335.4 16.3 230 471-724 45-283 (355)
14 KOG0593 Predicted protein kina 100.0 1E-40 2.2E-45 336.6 14.6 250 470-733 2-284 (396)
15 KOG0578 p21-activated serine/t 100.0 1.5E-40 3.3E-45 362.4 16.3 249 471-738 274-528 (550)
16 KOG0597 Serine-threonine prote 100.0 3.1E-40 6.7E-45 355.8 15.7 247 470-736 2-254 (808)
17 cd05102 PTKc_VEGFR3 Catalytic 100.0 2E-39 4.3E-44 357.6 20.6 255 469-739 6-335 (338)
18 PHA02988 hypothetical protein; 100.0 5.8E-39 1.3E-43 345.2 23.6 256 456-739 11-280 (283)
19 KOG0193 Serine/threonine prote 100.0 7.1E-40 1.5E-44 357.6 16.4 262 463-738 385-654 (678)
20 KOG0582 Ste20-like serine/thre 100.0 2.3E-39 5.1E-44 342.3 19.8 261 469-735 25-295 (516)
21 KOG0583 Serine/threonine prote 100.0 3.7E-39 8E-44 355.6 20.2 247 466-734 13-276 (370)
22 KOG4721 Serine/threonine prote 100.0 3.1E-40 6.8E-45 355.1 10.6 233 476-733 130-364 (904)
23 KOG0661 MAPK related serine/th 100.0 5.1E-40 1.1E-44 349.8 11.1 256 468-736 8-294 (538)
24 KOG0600 Cdc2-related protein k 100.0 2.4E-39 5.1E-44 347.2 15.1 254 470-735 117-402 (560)
25 KOG0588 Serine/threonine prote 100.0 5.6E-39 1.2E-43 353.1 15.9 245 470-736 12-266 (786)
26 cd05631 STKc_GRK4 Catalytic do 100.0 1.5E-38 3.2E-43 342.2 18.1 241 471-727 1-250 (285)
27 KOG0201 Serine/threonine prote 100.0 3.8E-39 8.1E-44 341.0 12.4 247 471-735 14-265 (467)
28 KOG1026 Nerve growth factor re 100.0 4.3E-39 9.3E-44 366.4 13.1 254 471-740 487-764 (774)
29 KOG0694 Serine/threonine prote 100.0 1.5E-38 3.2E-43 353.0 16.7 238 468-727 366-613 (694)
30 cd05096 PTKc_DDR1 Catalytic do 100.0 4.9E-38 1.1E-42 341.2 20.5 258 470-736 5-303 (304)
31 KOG0659 Cdk activating kinase 100.0 3E-38 6.6E-43 314.2 16.7 253 470-734 2-282 (318)
32 cd05612 STKc_PRKX_like Catalyt 100.0 4E-38 8.8E-43 339.9 18.0 233 470-726 1-242 (291)
33 PTZ00263 protein kinase A cata 100.0 2.4E-38 5.3E-43 347.8 15.4 234 470-727 18-260 (329)
34 KOG0585 Ca2+/calmodulin-depend 100.0 8E-38 1.7E-42 332.5 18.4 255 467-735 94-374 (576)
35 cd05571 STKc_PKB Catalytic dom 100.0 2.9E-38 6.4E-43 346.2 15.1 230 476-726 1-239 (323)
36 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-37 4.5E-42 340.7 21.8 254 469-735 4-303 (331)
37 KOG0611 Predicted serine/threo 100.0 3.8E-38 8.2E-43 327.4 14.6 244 469-735 52-305 (668)
38 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.1E-38 1.5E-42 344.6 17.8 247 470-733 1-257 (333)
39 cd05104 PTKc_Kit Catalytic dom 100.0 1.9E-37 4.2E-42 346.8 21.1 253 469-737 34-373 (375)
40 KOG1989 ARK protein kinase fam 100.0 7.8E-38 1.7E-42 358.0 17.7 261 467-738 34-312 (738)
41 KOG0580 Serine/threonine prote 100.0 1.7E-38 3.6E-43 311.9 10.2 244 470-734 22-274 (281)
42 cd07848 STKc_CDKL5 Catalytic d 100.0 1.9E-37 4.2E-42 333.3 18.8 251 470-731 1-282 (287)
43 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.6E-37 7.9E-42 327.8 20.7 250 470-738 5-265 (266)
44 PTZ00267 NIMA-related protein 100.0 2.1E-37 4.5E-42 357.1 20.0 249 471-734 68-324 (478)
45 cd05595 STKc_PKB_beta Catalyti 100.0 1E-37 2.2E-42 342.0 16.5 230 476-726 1-239 (323)
46 cd05585 STKc_YPK1_like Catalyt 100.0 1.8E-37 4E-42 338.3 18.2 230 478-728 1-239 (312)
47 cd05108 PTKc_EGFR Catalytic do 100.0 5.2E-37 1.1E-41 335.2 21.5 252 470-739 7-269 (316)
48 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-37 2.9E-42 341.8 16.7 229 476-725 1-238 (328)
49 cd05106 PTKc_CSF-1R Catalytic 100.0 2.9E-37 6.2E-42 345.2 19.3 254 469-738 37-372 (374)
50 KOG2345 Serine/threonine prote 100.0 8.5E-38 1.8E-42 308.1 13.0 265 467-738 18-300 (302)
51 KOG0589 Serine/threonine prote 100.0 5.9E-38 1.3E-42 340.9 12.5 248 470-735 4-260 (426)
52 PTZ00426 cAMP-dependent protei 100.0 2E-37 4.2E-42 342.0 16.9 232 470-725 30-271 (340)
53 cd05048 PTKc_Ror Catalytic Dom 100.0 7.7E-37 1.7E-41 327.7 20.8 251 471-737 6-282 (283)
54 cd07862 STKc_CDK6 Catalytic do 100.0 5.5E-37 1.2E-41 330.2 19.6 250 470-731 1-285 (290)
55 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.5E-37 1.6E-41 336.6 20.2 254 471-734 1-291 (338)
56 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-36 2.6E-41 322.3 20.7 249 470-737 6-260 (261)
57 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1E-36 2.2E-41 330.8 20.5 253 469-733 4-288 (303)
58 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.2E-37 1.8E-41 329.1 19.6 250 470-731 5-283 (288)
59 cd06650 PKc_MEK1 Catalytic dom 100.0 1.5E-36 3.2E-41 334.3 21.9 255 469-736 4-302 (333)
60 PTZ00283 serine/threonine prot 100.0 1.2E-36 2.6E-41 351.4 22.1 257 463-734 25-298 (496)
61 cd05592 STKc_nPKC_theta_delta 100.0 8.8E-37 1.9E-41 333.5 19.9 235 476-731 1-245 (316)
62 PF07714 Pkinase_Tyr: Protein 100.0 4E-37 8.6E-42 326.4 16.7 245 474-735 3-259 (259)
63 cd05052 PTKc_Abl Catalytic dom 100.0 1.7E-36 3.6E-41 321.9 21.2 249 471-738 7-262 (263)
64 cd05093 PTKc_TrkB Catalytic do 100.0 1.9E-36 4.1E-41 326.1 21.9 255 470-740 5-281 (288)
65 cd05589 STKc_PKN Catalytic dom 100.0 3.8E-37 8.2E-42 337.6 16.6 237 472-730 1-249 (324)
66 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.7E-36 3.6E-41 320.4 20.8 246 470-735 4-255 (256)
67 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-36 2.9E-41 341.8 21.3 254 469-738 36-397 (400)
68 cd05605 STKc_GRK4_like Catalyt 100.0 6.3E-37 1.4E-41 329.5 17.8 244 471-728 1-251 (285)
69 cd05068 PTKc_Frk_like Catalyti 100.0 2.9E-36 6.3E-41 319.5 22.4 250 469-737 5-260 (261)
70 cd05062 PTKc_IGF-1R Catalytic 100.0 1.9E-36 4E-41 324.0 21.0 253 468-736 4-276 (277)
71 cd05094 PTKc_TrkC Catalytic do 100.0 2.6E-36 5.6E-41 325.6 22.2 255 470-740 5-284 (291)
72 cd05111 PTK_HER3 Pseudokinase 100.0 3.9E-36 8.4E-41 322.3 23.4 251 471-739 8-269 (279)
73 cd05599 STKc_NDR_like Catalyti 100.0 6E-37 1.3E-41 341.4 17.7 251 470-732 1-295 (364)
74 cd05587 STKc_cPKC Catalytic do 100.0 6E-37 1.3E-41 336.0 17.2 237 471-728 1-247 (324)
75 cd05608 STKc_GRK1 Catalytic do 100.0 6.9E-37 1.5E-41 328.3 17.3 238 478-729 1-248 (280)
76 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.3E-37 9.4E-42 325.5 15.4 251 468-737 4-260 (261)
77 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.5E-37 1.2E-41 339.6 16.8 252 470-733 1-285 (350)
78 PLN00034 mitogen-activated pro 100.0 3.9E-37 8.5E-42 341.6 15.7 241 472-733 76-328 (353)
79 cd05584 STKc_p70S6K Catalytic 100.0 6.1E-37 1.3E-41 335.8 17.0 230 476-726 2-244 (323)
80 cd05594 STKc_PKB_alpha Catalyt 100.0 2.3E-37 4.9E-42 339.5 13.6 229 476-725 1-239 (325)
81 cd05616 STKc_cPKC_beta Catalyt 100.0 6E-37 1.3E-41 335.8 16.9 237 471-728 1-247 (323)
82 KOG1095 Protein tyrosine kinas 100.0 5E-37 1.1E-41 361.4 17.3 251 471-739 693-962 (1025)
83 cd05054 PTKc_VEGFR Catalytic d 100.0 1.8E-36 3.9E-41 334.1 20.2 253 470-738 7-333 (337)
84 cd05116 PTKc_Syk Catalytic dom 100.0 4E-36 8.7E-41 317.8 21.9 243 477-737 2-254 (257)
85 cd05049 PTKc_Trk Catalytic dom 100.0 2.5E-36 5.3E-41 323.1 20.4 251 470-736 5-279 (280)
86 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.6E-36 9.9E-41 317.8 22.0 249 470-737 6-259 (260)
87 cd05082 PTKc_Csk Catalytic dom 100.0 4.2E-36 9E-41 317.3 21.6 244 470-737 6-255 (256)
88 KOG0663 Protein kinase PITSLRE 100.0 7.8E-37 1.7E-41 312.4 15.3 252 471-734 77-362 (419)
89 cd05590 STKc_nPKC_eta Catalyti 100.0 8.2E-37 1.8E-41 334.4 16.6 232 476-728 1-242 (320)
90 PRK13184 pknD serine/threonine 100.0 4E-36 8.7E-41 356.7 23.6 264 470-740 2-292 (932)
91 cd05607 STKc_GRK7 Catalytic do 100.0 2.4E-36 5.3E-41 323.5 19.4 243 478-735 1-252 (277)
92 cd05033 PTKc_EphR Catalytic do 100.0 5.1E-36 1.1E-40 318.5 21.7 251 470-738 4-265 (266)
93 cd05619 STKc_nPKC_theta Cataly 100.0 1.5E-36 3.3E-41 331.7 18.1 235 476-731 1-245 (316)
94 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.7E-36 8.1E-41 322.8 20.7 260 470-738 4-283 (284)
95 cd05588 STKc_aPKC Catalytic do 100.0 6.3E-37 1.4E-41 336.6 15.1 231 476-727 1-250 (329)
96 cd05620 STKc_nPKC_delta Cataly 100.0 1.2E-36 2.6E-41 332.5 17.1 235 476-731 1-245 (316)
97 cd05071 PTKc_Src Catalytic dom 100.0 6.9E-36 1.5E-40 317.2 22.3 250 470-738 6-260 (262)
98 cd05582 STKc_RSK_N N-terminal 100.0 4.9E-37 1.1E-41 335.8 13.9 237 476-733 2-249 (318)
99 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.4E-36 7.4E-41 323.0 20.1 257 471-738 4-281 (283)
100 KOG0194 Protein tyrosine kinas 100.0 1E-36 2.2E-41 337.4 16.3 255 470-743 157-425 (474)
101 cd05626 STKc_LATS2 Catalytic d 100.0 1.7E-36 3.7E-41 340.0 18.3 256 471-735 2-307 (381)
102 PHA03212 serine/threonine kina 100.0 3.8E-36 8.3E-41 337.6 21.1 246 470-733 92-376 (391)
103 cd05109 PTKc_HER2 Catalytic do 100.0 8.3E-36 1.8E-40 319.3 22.7 253 470-740 7-270 (279)
104 KOG0658 Glycogen synthase kina 100.0 9.1E-37 2E-41 317.7 14.7 255 470-739 24-313 (364)
105 cd05575 STKc_SGK Catalytic dom 100.0 9.7E-37 2.1E-41 334.2 15.8 240 476-736 1-250 (323)
106 cd05075 PTKc_Axl Catalytic dom 100.0 7.7E-36 1.7E-40 317.9 22.2 251 472-738 1-271 (272)
107 cd05090 PTKc_Ror1 Catalytic do 100.0 5.4E-36 1.2E-40 321.5 21.2 251 470-736 5-281 (283)
108 cd06637 STKc_TNIK Catalytic do 100.0 2.6E-36 5.6E-41 321.5 18.5 251 466-732 2-268 (272)
109 cd06646 STKc_MAP4K5 Catalytic 100.0 3.9E-36 8.4E-41 319.5 19.7 248 470-731 9-263 (267)
110 cd05615 STKc_cPKC_alpha Cataly 100.0 1.4E-36 3E-41 333.1 16.7 241 471-732 1-251 (323)
111 cd05614 STKc_MSK2_N N-terminal 100.0 8.3E-37 1.8E-41 335.9 15.1 238 471-728 1-257 (332)
112 KOG0660 Mitogen-activated prot 100.0 5.2E-37 1.1E-41 319.0 12.5 261 464-736 16-313 (359)
113 cd05039 PTKc_Csk_like Catalyti 100.0 8.4E-36 1.8E-40 314.9 22.0 245 470-737 6-255 (256)
114 cd05084 PTKc_Fes Catalytic dom 100.0 6.1E-36 1.3E-40 315.1 20.8 242 477-736 2-251 (252)
115 cd05601 STKc_CRIK Catalytic do 100.0 7.7E-37 1.7E-41 335.9 14.5 248 470-733 1-263 (330)
116 cd05035 PTKc_Axl_like Catalyti 100.0 6.8E-36 1.5E-40 318.1 21.2 251 472-738 1-272 (273)
117 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.6E-36 1.2E-40 316.7 20.3 244 471-734 5-254 (256)
118 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-36 2.4E-41 333.4 15.4 230 477-727 2-241 (321)
119 cd05067 PTKc_Lck_Blk Catalytic 100.0 8.3E-36 1.8E-40 315.8 21.5 250 469-737 5-259 (260)
120 cd07876 STKc_JNK2 Catalytic do 100.0 6.4E-36 1.4E-40 332.6 21.6 253 468-736 19-318 (359)
121 cd08529 STKc_FA2-like Catalyti 100.0 4.3E-36 9.3E-41 316.5 19.1 243 471-731 1-251 (256)
122 PTZ00266 NIMA-related protein 100.0 2.2E-36 4.8E-41 360.0 18.8 258 465-735 8-297 (1021)
123 cd05045 PTKc_RET Catalytic dom 100.0 7.7E-36 1.7E-40 321.6 21.4 253 471-739 1-287 (290)
124 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-35 2.3E-40 314.9 22.0 245 477-738 2-255 (257)
125 PTZ00036 glycogen synthase kin 100.0 1.7E-36 3.6E-41 345.8 17.0 253 468-735 64-353 (440)
126 cd08228 STKc_Nek6 Catalytic do 100.0 1.2E-35 2.7E-40 315.4 22.5 253 470-739 2-266 (267)
127 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-36 2.5E-41 334.5 15.1 231 476-727 1-250 (329)
128 cd05570 STKc_PKC Catalytic dom 100.0 2E-36 4.3E-41 331.0 16.8 231 476-727 1-241 (318)
129 cd05598 STKc_LATS Catalytic do 100.0 1.2E-36 2.7E-41 340.5 15.5 254 470-733 1-301 (376)
130 cd06624 STKc_ASK Catalytic dom 100.0 6.6E-36 1.4E-40 318.0 20.1 254 464-732 2-264 (268)
131 cd05051 PTKc_DDR Catalytic dom 100.0 9.3E-36 2E-40 321.5 21.5 258 470-736 5-295 (296)
132 cd05628 STKc_NDR1 Catalytic do 100.0 6.8E-36 1.5E-40 333.0 21.0 253 470-733 1-293 (363)
133 KOG0599 Phosphorylase kinase g 100.0 1.4E-36 3E-41 302.2 13.4 253 466-736 13-286 (411)
134 cd05059 PTKc_Tec_like Catalyti 100.0 1E-35 2.2E-40 314.6 21.0 244 471-734 5-254 (256)
135 cd05069 PTKc_Yes Catalytic dom 100.0 1.7E-35 3.7E-40 313.5 22.8 249 470-737 6-259 (260)
136 cd05097 PTKc_DDR_like Catalyti 100.0 6.9E-36 1.5E-40 322.9 20.0 258 470-736 5-294 (295)
137 cd05596 STKc_ROCK Catalytic do 100.0 2E-36 4.4E-41 337.9 16.3 247 468-733 41-304 (370)
138 cd05629 STKc_NDR_like_fungal C 100.0 2.7E-36 5.9E-41 337.9 17.3 252 470-733 1-305 (377)
139 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-36 3.3E-41 333.3 14.9 232 476-728 1-249 (327)
140 cd05625 STKc_LATS1 Catalytic d 100.0 2.3E-36 5.1E-41 339.1 16.7 246 471-726 2-295 (382)
141 cd05056 PTKc_FAK Catalytic dom 100.0 1.4E-35 3.1E-40 315.8 21.9 252 470-740 6-267 (270)
142 cd05092 PTKc_TrkA Catalytic do 100.0 1E-35 2.2E-40 319.1 20.8 251 470-736 5-279 (280)
143 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.3E-35 2.7E-40 315.4 21.3 249 471-731 1-262 (267)
144 cd05091 PTKc_Ror2 Catalytic do 100.0 3.3E-36 7.2E-41 323.0 17.1 250 471-736 6-281 (283)
145 cd05632 STKc_GRK5 Catalytic do 100.0 8.4E-36 1.8E-40 320.8 20.2 243 472-730 2-253 (285)
146 cd05603 STKc_SGK2 Catalytic do 100.0 1.9E-36 4.2E-41 331.5 15.4 240 476-736 1-250 (321)
147 cd05060 PTKc_Syk_like Catalyti 100.0 1.5E-35 3.3E-40 313.3 21.7 245 476-738 1-255 (257)
148 cd06625 STKc_MEKK3_like Cataly 100.0 1.8E-35 4E-40 313.2 22.3 248 470-731 2-258 (263)
149 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-35 2.3E-40 321.8 20.9 249 470-735 20-272 (296)
150 cd05053 PTKc_FGFR Catalytic do 100.0 8.1E-36 1.8E-40 321.6 19.8 256 467-738 9-291 (293)
151 cd05089 PTKc_Tie1 Catalytic do 100.0 1.4E-35 3.1E-40 320.8 21.7 252 470-740 2-277 (297)
152 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-35 2.5E-40 319.5 20.6 249 471-731 1-283 (288)
153 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.3E-35 5E-40 312.9 22.7 251 470-738 2-265 (267)
154 KOG0033 Ca2+/calmodulin-depend 100.0 9.4E-38 2E-42 306.3 3.9 247 469-733 10-267 (355)
155 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-35 2.5E-40 317.4 20.4 252 469-736 5-276 (277)
156 cd05602 STKc_SGK1 Catalytic do 100.0 2.2E-36 4.8E-41 331.7 15.1 242 476-738 1-252 (325)
157 cd07853 STKc_NLK Catalytic dom 100.0 7.8E-36 1.7E-40 333.6 19.7 252 471-734 1-289 (372)
158 cd05604 STKc_SGK3 Catalytic do 100.0 1.8E-36 3.9E-41 332.4 14.2 240 476-736 1-250 (325)
159 PTZ00284 protein kinase; Provi 100.0 4.5E-36 9.8E-41 345.5 18.2 255 464-735 123-440 (467)
160 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.3E-36 2E-40 324.2 19.7 254 470-735 6-288 (309)
161 cd06638 STKc_myosinIIIA Cataly 100.0 1.3E-35 2.9E-40 318.6 20.6 260 460-733 8-283 (286)
162 cd06643 STKc_SLK Catalytic dom 100.0 1.3E-35 2.9E-40 318.2 20.6 244 472-732 7-261 (282)
163 cd05063 PTKc_EphR_A2 Catalytic 100.0 2E-35 4.4E-40 314.1 21.7 253 469-738 4-267 (268)
164 cd06631 STKc_YSK4 Catalytic do 100.0 2.6E-35 5.6E-40 312.8 22.3 251 471-731 1-260 (265)
165 cd05621 STKc_ROCK2 Catalytic d 100.0 5.3E-36 1.1E-40 334.4 17.8 247 468-733 41-304 (370)
166 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.6E-35 3.4E-40 322.1 21.0 256 469-740 17-301 (307)
167 cd07874 STKc_JNK3 Catalytic do 100.0 8.9E-36 1.9E-40 330.9 19.5 252 467-734 14-312 (355)
168 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.5E-35 3.3E-40 333.1 21.5 256 467-738 34-399 (401)
169 cd05043 PTK_Ryk Pseudokinase d 100.0 1.6E-35 3.4E-40 317.2 20.6 255 469-739 5-277 (280)
170 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-35 3.2E-40 317.1 20.4 252 468-735 4-275 (277)
171 cd06644 STKc_STK10_LOK Catalyt 100.0 2.7E-35 5.9E-40 317.6 22.5 248 470-732 12-268 (292)
172 cd08229 STKc_Nek7 Catalytic do 100.0 1.8E-35 4E-40 314.1 20.8 256 470-738 2-265 (267)
173 cd06655 STKc_PAK2 Catalytic do 100.0 3.4E-35 7.4E-40 317.9 23.2 250 470-738 19-274 (296)
174 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.2E-35 4.7E-40 320.4 21.7 256 469-740 14-298 (304)
175 KOG0610 Putative serine/threon 100.0 8.9E-36 1.9E-40 313.1 17.8 247 471-728 78-383 (459)
176 cd05630 STKc_GRK6 Catalytic do 100.0 6.8E-36 1.5E-40 321.5 17.5 243 471-727 1-250 (285)
177 KOG4257 Focal adhesion tyrosin 100.0 3.7E-36 7.9E-41 326.8 14.9 255 467-738 386-649 (974)
178 cd05061 PTKc_InsR Catalytic do 100.0 1.6E-35 3.4E-40 318.9 19.9 255 468-738 4-278 (288)
179 cd06612 STKc_MST1_2 Catalytic 100.0 1.9E-35 4.1E-40 311.6 20.1 246 470-732 3-252 (256)
180 cd05050 PTKc_Musk Catalytic do 100.0 2.3E-35 4.9E-40 317.5 21.0 252 469-736 4-287 (288)
181 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-35 3.1E-40 327.0 19.7 247 468-733 33-293 (382)
182 cd06619 PKc_MKK5 Catalytic dom 100.0 9.6E-36 2.1E-40 319.1 18.0 244 471-732 2-252 (279)
183 cd05055 PTKc_PDGFR Catalytic d 100.0 2.6E-35 5.6E-40 319.8 21.3 252 469-737 34-300 (302)
184 cd06613 STKc_MAP4K3_like Catal 100.0 3.3E-35 7.2E-40 310.8 21.5 249 470-731 3-258 (262)
185 cd05083 PTKc_Chk Catalytic dom 100.0 2.1E-35 4.6E-40 311.6 19.9 243 470-736 6-252 (254)
186 cd07875 STKc_JNK1 Catalytic do 100.0 1.8E-35 3.8E-40 329.7 20.2 251 468-734 22-319 (364)
187 cd07861 STKc_CDK1_euk Catalyti 100.0 2.4E-35 5.2E-40 316.3 20.5 251 471-731 1-280 (285)
188 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.6E-35 3.5E-40 318.2 19.1 250 471-733 2-262 (286)
189 KOG4717 Serine/threonine prote 100.0 5.3E-36 1.1E-40 319.2 15.0 244 470-732 18-269 (864)
190 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.3E-35 5.1E-40 326.0 20.8 254 470-739 7-340 (343)
191 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.1E-35 2.4E-40 328.5 18.2 250 467-734 12-299 (343)
192 cd06656 STKc_PAK3 Catalytic do 100.0 1.9E-35 4.1E-40 320.0 19.6 248 470-734 19-270 (297)
193 cd00192 PTKc Catalytic domain 100.0 3.6E-35 7.9E-40 309.6 21.1 244 476-735 1-261 (262)
194 cd05110 PTKc_HER4 Catalytic do 100.0 4.4E-35 9.4E-40 318.1 22.3 252 470-739 7-269 (303)
195 cd08219 STKc_Nek3 Catalytic do 100.0 2.5E-35 5.4E-40 311.1 19.7 243 471-731 1-250 (255)
196 cd06645 STKc_MAP4K3 Catalytic 100.0 1.8E-35 3.9E-40 314.3 18.8 246 470-731 9-263 (267)
197 cd05085 PTKc_Fer Catalytic dom 100.0 4.7E-35 1E-39 307.8 21.7 240 477-735 2-248 (250)
198 cd05088 PTKc_Tie2 Catalytic do 100.0 2.2E-35 4.8E-40 320.4 19.8 251 470-739 7-281 (303)
199 KOG1094 Discoidin domain recep 100.0 6.8E-36 1.5E-40 323.4 15.5 258 470-736 538-802 (807)
200 KOG0577 Serine/threonine prote 100.0 3E-36 6.5E-41 325.7 12.7 243 471-734 27-279 (948)
201 cd05066 PTKc_EphR_A Catalytic 100.0 3.5E-35 7.5E-40 312.5 20.8 252 470-738 4-266 (267)
202 cd05040 PTKc_Ack_like Catalyti 100.0 3.3E-35 7.1E-40 310.3 20.3 244 477-735 2-255 (257)
203 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.2E-35 9.1E-40 311.4 21.1 233 477-734 2-260 (262)
204 cd05095 PTKc_DDR2 Catalytic do 100.0 3E-35 6.5E-40 318.1 20.3 259 470-736 5-295 (296)
205 cd06611 STKc_SLK_like Catalyti 100.0 1.8E-35 3.8E-40 316.8 18.3 248 469-733 4-262 (280)
206 cd05622 STKc_ROCK1 Catalytic d 100.0 1E-35 2.2E-40 332.3 17.1 252 462-731 35-302 (371)
207 cd05058 PTKc_Met_Ron Catalytic 100.0 5.5E-35 1.2E-39 309.6 21.7 246 477-738 2-259 (262)
208 cd06609 STKc_MST3_like Catalyt 100.0 2.3E-35 5.1E-40 314.9 18.9 242 470-732 1-250 (274)
209 KOG4279 Serine/threonine prote 100.0 6.2E-36 1.3E-40 327.7 14.6 247 477-739 582-838 (1226)
210 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.3E-35 7.2E-40 315.6 20.1 260 470-738 4-283 (284)
211 KOG4278 Protein tyrosine kinas 100.0 6.1E-36 1.3E-40 324.1 14.2 249 471-738 268-523 (1157)
212 cd06615 PKc_MEK Catalytic doma 100.0 5E-35 1.1E-39 318.4 21.6 251 470-734 1-288 (308)
213 KOG0594 Protein kinase PCTAIRE 100.0 1.2E-35 2.5E-40 310.3 15.8 254 470-733 11-302 (323)
214 cd08223 STKc_Nek4 Catalytic do 100.0 9.2E-35 2E-39 306.7 22.7 244 471-732 1-253 (257)
215 cd05065 PTKc_EphR_B Catalytic 100.0 4.1E-35 8.9E-40 312.1 20.1 253 471-738 5-268 (269)
216 cd05073 PTKc_Hck Catalytic dom 100.0 6.6E-35 1.4E-39 309.1 21.5 250 469-737 5-259 (260)
217 cd05034 PTKc_Src_like Catalyti 100.0 6.4E-35 1.4E-39 308.8 21.3 250 469-737 5-260 (261)
218 cd05597 STKc_DMPK_like Catalyt 100.0 4E-35 8.6E-40 322.6 20.2 250 470-733 1-266 (331)
219 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.2E-35 1.5E-39 318.0 21.7 255 470-740 12-295 (314)
220 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.4E-35 7.4E-40 314.3 18.8 246 471-735 5-255 (277)
221 cd05627 STKc_NDR2 Catalytic do 100.0 2E-35 4.4E-40 328.7 17.4 246 470-727 1-284 (360)
222 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.6E-35 7.9E-40 314.7 18.5 256 460-731 6-277 (282)
223 cd07868 STKc_CDK8 Catalytic do 100.0 4.6E-35 9.9E-40 319.7 19.6 193 475-676 6-217 (317)
224 cd06658 STKc_PAK5 Catalytic do 100.0 3.7E-35 8E-40 317.0 18.6 249 473-738 25-277 (292)
225 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.7E-35 8E-40 318.1 18.6 251 470-732 6-285 (301)
226 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.7E-35 2.1E-39 309.4 21.6 247 477-735 2-267 (269)
227 cd05047 PTKc_Tie Catalytic dom 100.0 8.6E-35 1.9E-39 310.1 21.1 243 477-738 2-268 (270)
228 cd06639 STKc_myosinIIIB Cataly 100.0 7.2E-35 1.6E-39 314.1 20.6 258 459-732 11-286 (291)
229 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.5E-34 3.2E-39 318.4 23.4 255 470-740 12-295 (334)
230 PHA03207 serine/threonine kina 100.0 1.7E-35 3.7E-40 333.1 16.1 250 469-734 91-376 (392)
231 KOG0196 Tyrosine kinase, EPH ( 100.0 3.2E-36 6.9E-41 335.6 10.0 252 472-740 631-893 (996)
232 cd06651 STKc_MEKK3 Catalytic d 100.0 1E-34 2.2E-39 308.8 21.1 248 470-732 2-260 (266)
233 cd05057 PTKc_EGFR_like Catalyt 100.0 1.4E-34 3E-39 309.9 22.2 252 470-739 7-269 (279)
234 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.2E-35 1.1E-39 312.9 18.6 229 477-730 2-269 (274)
235 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4E-35 8.8E-40 314.0 17.7 259 471-738 5-283 (284)
236 cd06640 STKc_MST4 Catalytic do 100.0 1.3E-34 2.8E-39 309.9 21.4 246 471-735 5-255 (277)
237 cd05044 PTKc_c-ros Catalytic d 100.0 8.3E-35 1.8E-39 309.4 19.8 244 477-736 2-268 (269)
238 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.2E-35 4.8E-40 312.4 15.0 235 477-735 2-257 (258)
239 KOG0584 Serine/threonine prote 100.0 1.1E-35 2.4E-40 327.2 12.9 242 476-738 46-301 (632)
240 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-34 4.2E-39 306.2 22.1 247 470-731 2-259 (265)
241 cd06659 STKc_PAK6 Catalytic do 100.0 1E-34 2.2E-39 314.4 20.2 242 475-733 26-271 (297)
242 cd05112 PTKc_Itk Catalytic dom 100.0 2E-34 4.3E-39 304.2 21.9 245 470-734 4-254 (256)
243 cd05042 PTKc_Aatyk Catalytic d 100.0 1.2E-34 2.6E-39 308.5 20.4 247 477-735 2-267 (269)
244 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-35 3.6E-40 325.4 14.0 238 478-736 1-252 (330)
245 cd05623 STKc_MRCK_alpha Cataly 100.0 6.5E-35 1.4E-39 321.0 18.7 250 470-733 1-266 (332)
246 cd07867 STKc_CDC2L6 Catalytic 100.0 1.1E-34 2.5E-39 316.3 20.3 193 475-676 6-217 (317)
247 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.7E-35 1.4E-39 313.3 18.2 248 470-731 5-264 (284)
248 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.2E-34 2.7E-39 305.9 19.9 231 477-734 2-257 (259)
249 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-34 3.1E-39 317.6 21.1 255 475-733 3-307 (327)
250 KOG0574 STE20-like serine/thre 100.0 8.4E-37 1.8E-41 306.8 3.0 247 472-735 35-285 (502)
251 cd05624 STKc_MRCK_beta Catalyt 100.0 5.4E-35 1.2E-39 321.5 17.7 245 470-728 1-261 (331)
252 PHA03211 serine/threonine kina 100.0 8.2E-35 1.8E-39 331.5 19.7 249 469-733 168-455 (461)
253 KOG0986 G protein-coupled rece 100.0 1.2E-35 2.7E-40 313.7 11.9 245 470-728 185-436 (591)
254 cd08217 STKc_Nek2 Catalytic do 100.0 1.5E-34 3.3E-39 305.6 20.3 249 471-733 1-262 (265)
255 cd06632 STKc_MEKK1_plant Catal 100.0 1.5E-34 3.2E-39 305.0 20.1 243 471-731 1-253 (258)
256 KOG0579 Ste20-like serine/thre 100.0 5.7E-36 1.2E-40 324.8 9.4 250 471-735 33-291 (1187)
257 PF00069 Pkinase: Protein kina 100.0 2.6E-35 5.6E-40 311.1 14.3 246 472-731 1-255 (260)
258 KOG0596 Dual specificity; seri 100.0 1.4E-35 3E-40 320.2 12.2 251 470-736 361-630 (677)
259 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.1E-34 6.8E-39 308.7 22.7 251 470-733 1-266 (287)
260 cd05041 PTKc_Fes_like Catalyti 100.0 2.6E-34 5.7E-39 302.3 21.6 243 476-736 1-250 (251)
261 cd08220 STKc_Nek8 Catalytic do 100.0 1.5E-34 3.3E-39 304.7 19.6 244 471-733 1-253 (256)
262 PHA03209 serine/threonine kina 100.0 6.4E-35 1.4E-39 324.3 17.6 189 468-675 64-256 (357)
263 cd08221 STKc_Nek9 Catalytic do 100.0 2.8E-34 6E-39 303.1 21.6 243 471-731 1-251 (256)
264 cd05574 STKc_phototropin_like 100.0 3.3E-34 7.1E-39 312.8 22.3 251 470-731 1-283 (316)
265 cd08218 STKc_Nek1 Catalytic do 100.0 9.9E-35 2.2E-39 306.5 17.6 245 471-733 1-253 (256)
266 cd06608 STKc_myosinIII_like Ca 100.0 1.6E-34 3.4E-39 307.5 19.1 250 467-732 3-271 (275)
267 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.9E-34 6.2E-39 304.4 21.0 255 470-732 1-263 (267)
268 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.4E-34 5.1E-39 308.6 20.6 250 470-731 1-281 (286)
269 cd06623 PKc_MAPKK_plant_like C 100.0 1.6E-34 3.5E-39 305.7 18.9 247 470-733 1-256 (264)
270 cd06647 STKc_PAK_I Catalytic d 100.0 2.9E-34 6.2E-39 310.2 20.8 250 470-736 19-272 (293)
271 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-34 3.9E-39 306.4 18.7 248 471-731 1-262 (268)
272 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.4E-35 2E-39 311.9 16.6 251 470-732 1-282 (286)
273 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.4E-34 7.4E-39 305.4 20.8 249 471-732 2-268 (272)
274 cd07860 STKc_CDK2_3 Catalytic 100.0 2.1E-34 4.6E-39 309.0 19.1 250 471-731 1-279 (284)
275 cd05074 PTKc_Tyro3 Catalytic d 100.0 4E-34 8.7E-39 304.9 20.7 251 472-738 1-272 (273)
276 cd06641 STKc_MST3 Catalytic do 100.0 6E-34 1.3E-38 304.8 22.1 242 471-733 5-253 (277)
277 cd05046 PTK_CCK4 Pseudokinase 100.0 4.1E-34 8.8E-39 305.3 20.7 250 470-735 5-273 (275)
278 cd05609 STKc_MAST Catalytic do 100.0 6.6E-34 1.4E-38 309.0 22.3 254 470-736 1-272 (305)
279 KOG1151 Tousled-like protein k 100.0 7.9E-35 1.7E-39 305.4 14.3 257 466-729 459-737 (775)
280 smart00219 TyrKc Tyrosine kina 100.0 5.9E-34 1.3E-38 300.1 21.1 241 472-729 1-253 (258)
281 cd06917 STKc_NAK1_like Catalyt 100.0 4.7E-34 1E-38 305.1 20.3 245 471-734 2-256 (277)
282 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.4E-34 9.5E-39 306.2 20.0 248 470-733 1-261 (283)
283 cd06648 STKc_PAK_II Catalytic 100.0 4.5E-34 9.7E-39 307.3 20.0 243 472-733 21-269 (285)
284 cd07832 STKc_CCRK Catalytic do 100.0 2.9E-34 6.2E-39 307.9 18.4 252 471-733 1-282 (286)
285 cd07841 STKc_CDK7 Catalytic do 100.0 3.7E-34 8E-39 309.5 19.2 250 471-732 1-281 (298)
286 cd06605 PKc_MAPKK Catalytic do 100.0 1.2E-34 2.6E-39 307.3 15.1 245 470-732 1-256 (265)
287 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.1E-33 2.4E-38 304.8 22.8 253 468-732 3-287 (291)
288 cd05580 STKc_PKA Catalytic dom 100.0 4.5E-34 9.9E-39 307.9 19.6 234 470-727 1-243 (290)
289 KOG0199 ACK and related non-re 100.0 7.8E-34 1.7E-38 312.4 21.5 242 475-732 115-366 (1039)
290 cd06626 STKc_MEKK4 Catalytic d 100.0 6.6E-34 1.4E-38 301.2 20.4 250 471-732 1-260 (264)
291 cd07839 STKc_CDK5 Catalytic do 100.0 3.3E-34 7.1E-39 307.5 18.2 249 471-731 1-279 (284)
292 cd06614 STKc_PAK Catalytic dom 100.0 8.4E-34 1.8E-38 305.0 21.3 248 467-732 16-269 (286)
293 cd05122 PKc_STE Catalytic doma 100.0 9.6E-34 2.1E-38 296.5 21.0 246 471-732 1-250 (253)
294 cd07833 STKc_CDKL Catalytic do 100.0 4.2E-34 9.1E-39 307.0 18.7 251 470-731 1-283 (288)
295 KOG0667 Dual-specificity tyros 100.0 2.6E-34 5.6E-39 319.6 17.5 252 471-737 187-506 (586)
296 cd07836 STKc_Pho85 Catalytic d 100.0 7.1E-34 1.5E-38 304.8 20.2 251 471-731 1-279 (284)
297 cd05578 STKc_Yank1 Catalytic d 100.0 3.7E-34 8.1E-39 302.6 17.8 238 471-727 1-247 (258)
298 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-33 2.3E-38 301.4 21.3 247 477-735 2-266 (268)
299 cd06607 STKc_TAO Catalytic dom 100.0 1.4E-33 3E-38 306.7 22.7 243 470-733 15-267 (307)
300 cd07844 STKc_PCTAIRE_like Cata 100.0 7.9E-34 1.7E-38 305.8 20.5 250 470-731 5-286 (291)
301 cd08225 STKc_Nek5 Catalytic do 100.0 4.7E-34 1E-38 301.1 18.3 244 471-732 1-253 (257)
302 cd07835 STKc_CDK1_like Catalyt 100.0 6.4E-34 1.4E-38 305.1 19.6 249 472-731 1-278 (283)
303 KOG0983 Mitogen-activated prot 100.0 9.9E-35 2.2E-39 289.3 12.1 243 476-736 98-352 (391)
304 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-33 2.5E-38 300.8 21.0 248 471-735 1-267 (269)
305 cd06606 STKc_MAPKKK Catalytic 100.0 1.7E-33 3.7E-38 295.9 21.1 248 471-733 1-257 (260)
306 cd06616 PKc_MKK4 Catalytic dom 100.0 6.1E-34 1.3E-38 306.2 17.8 251 471-735 5-269 (288)
307 cd07837 STKc_CdkB_plant Cataly 100.0 6.4E-34 1.4E-38 307.0 18.0 253 470-732 1-290 (295)
308 cd05577 STKc_GRK Catalytic dom 100.0 6.6E-34 1.4E-38 304.4 17.7 236 478-729 1-245 (277)
309 cd07843 STKc_CDC2L1 Catalytic 100.0 1.3E-33 2.9E-38 304.5 19.9 251 470-732 5-289 (293)
310 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.7E-33 3.8E-38 298.9 20.4 247 470-731 2-259 (264)
311 cd07850 STKc_JNK Catalytic dom 100.0 1.7E-33 3.6E-38 312.5 20.5 252 468-735 14-313 (353)
312 KOG0612 Rho-associated, coiled 100.0 2.9E-34 6.3E-39 331.4 14.1 247 462-726 67-328 (1317)
313 KOG4645 MAPKKK (MAP kinase kin 100.0 4.5E-35 9.7E-40 342.0 7.3 257 464-736 1229-1497(1509)
314 KOG0690 Serine/threonine prote 100.0 7.8E-35 1.7E-39 295.6 7.9 239 470-727 168-413 (516)
315 cd08216 PK_STRAD Pseudokinase 100.0 2.9E-33 6.4E-38 304.9 20.9 258 474-735 6-297 (314)
316 cd05572 STKc_cGK_PKG Catalytic 100.0 2.9E-33 6.2E-38 296.6 20.2 232 478-729 1-243 (262)
317 cd07849 STKc_ERK1_2_like Catal 100.0 2.3E-33 5E-38 309.2 19.8 256 468-734 3-293 (336)
318 cd06635 STKc_TAO1 Catalytic do 100.0 5E-33 1.1E-37 303.9 22.1 242 472-736 27-280 (317)
319 cd06627 STKc_Cdc7_like Catalyt 100.0 5.3E-33 1.1E-37 292.1 21.3 243 471-731 1-249 (254)
320 PLN00009 cyclin-dependent kina 100.0 2.4E-33 5.3E-38 302.6 19.1 253 470-733 2-284 (294)
321 KOG0608 Warts/lats-like serine 100.0 2.4E-33 5.3E-38 305.1 18.8 244 471-725 630-917 (1034)
322 PHA02882 putative serine/threo 100.0 4.2E-33 9.1E-38 301.3 20.8 256 470-735 12-293 (294)
323 cd06657 STKc_PAK4 Catalytic do 100.0 3.6E-33 7.8E-38 301.5 20.1 241 476-735 26-272 (292)
324 cd07842 STKc_CDK8_like Catalyt 100.0 2.3E-33 4.9E-38 305.6 18.6 200 471-677 1-218 (316)
325 cd07845 STKc_CDK10 Catalytic d 100.0 3.9E-33 8.4E-38 303.5 20.1 253 469-733 6-290 (309)
326 cd07831 STKc_MOK Catalytic dom 100.0 3E-33 6.6E-38 299.3 18.9 247 472-732 1-278 (282)
327 cd07855 STKc_ERK5 Catalytic do 100.0 2.3E-33 5E-38 308.9 18.0 257 469-734 4-295 (334)
328 cd05633 STKc_GRK3 Catalytic do 100.0 2.6E-33 5.6E-38 300.5 17.9 231 477-726 1-243 (279)
329 cd06618 PKc_MKK7 Catalytic dom 100.0 2.7E-33 5.9E-38 302.8 18.1 248 470-735 15-275 (296)
330 KOG4250 TANK binding protein k 100.0 3.8E-34 8.3E-39 318.6 11.6 248 471-728 14-301 (732)
331 PHA03210 serine/threonine kina 100.0 1.1E-33 2.3E-38 327.6 15.9 261 466-735 144-456 (501)
332 cd07852 STKc_MAPK15 Catalytic 100.0 4.3E-33 9.4E-38 307.1 19.6 258 468-734 5-296 (337)
333 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.6E-33 7.8E-38 308.8 18.9 259 459-734 6-301 (345)
334 PHA03390 pk1 serine/threonine- 100.0 5.7E-33 1.2E-37 295.9 19.5 247 461-731 5-260 (267)
335 cd07840 STKc_CDK9_like Catalyt 100.0 6.3E-33 1.4E-37 297.3 20.0 249 472-731 1-282 (287)
336 cd05118 STKc_CMGC Catalytic do 100.0 6.9E-33 1.5E-37 296.6 20.0 249 472-732 1-279 (283)
337 cd08215 STKc_Nek Catalytic dom 100.0 3.3E-33 7.1E-38 293.9 17.1 245 471-732 1-254 (258)
338 cd05581 STKc_PDK1 Catalytic do 100.0 4E-33 8.6E-38 297.7 17.9 245 470-727 1-267 (280)
339 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.6E-33 5.5E-38 309.0 16.9 254 469-735 4-293 (337)
340 cd08530 STKc_CNK2-like Catalyt 100.0 7.9E-33 1.7E-37 291.4 19.9 242 471-731 1-251 (256)
341 cd07865 STKc_CDK9 Catalytic do 100.0 9.1E-33 2E-37 299.9 20.8 254 470-731 12-305 (310)
342 PLN00113 leucine-rich repeat r 100.0 1.1E-32 2.5E-37 344.9 24.6 255 460-739 683-952 (968)
343 cd07864 STKc_CDK12 Catalytic d 100.0 7E-33 1.5E-37 299.9 19.6 254 467-731 4-297 (302)
344 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.3E-33 9.3E-38 308.0 18.3 253 465-734 10-299 (343)
345 KOG0586 Serine/threonine prote 100.0 1.5E-33 3.2E-38 310.3 14.0 251 464-736 50-309 (596)
346 cd07879 STKc_p38delta_MAPK13 C 100.0 5.4E-33 1.2E-37 307.1 18.5 247 469-733 14-297 (342)
347 cd07830 STKc_MAK_like Catalyti 100.0 6.9E-33 1.5E-37 297.0 18.4 248 472-731 1-278 (283)
348 cd05579 STKc_MAST_like Catalyt 100.0 8.5E-33 1.8E-37 292.3 18.7 242 478-735 1-255 (265)
349 cd07838 STKc_CDK4_6_like Catal 100.0 1.7E-32 3.7E-37 294.1 21.0 249 472-732 1-283 (287)
350 cd07866 STKc_BUR1 Catalytic do 100.0 9E-33 1.9E-37 300.1 18.7 257 469-731 7-306 (311)
351 cd05613 STKc_MSK1_N N-terminal 100.0 6.5E-33 1.4E-37 298.7 17.0 241 471-727 1-257 (290)
352 cd05611 STKc_Rim15_like Cataly 100.0 2E-32 4.3E-37 289.7 20.0 232 476-728 2-243 (260)
353 KOG0604 MAP kinase-activated p 100.0 1.7E-33 3.6E-38 283.9 11.0 246 467-733 58-322 (400)
354 cd05606 STKc_beta_ARK Catalyti 100.0 1.1E-32 2.3E-37 295.6 17.8 230 477-725 1-242 (278)
355 cd08226 PK_STRAD_beta Pseudoki 100.0 2.7E-32 5.9E-37 299.6 21.3 255 477-735 5-310 (328)
356 cd08222 STKc_Nek11 Catalytic d 100.0 2.2E-32 4.7E-37 289.5 19.7 246 471-732 1-256 (260)
357 cd07834 STKc_MAPK Catalytic do 100.0 1.6E-32 3.4E-37 301.4 19.1 253 471-733 1-289 (330)
358 cd06633 STKc_TAO3 Catalytic do 100.0 3.2E-32 7E-37 297.1 21.1 239 472-733 23-273 (313)
359 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.7E-32 5.8E-37 299.8 20.4 252 464-732 4-287 (328)
360 cd06634 STKc_TAO2 Catalytic do 100.0 2.4E-32 5.3E-37 297.3 19.8 241 471-734 16-268 (308)
361 KOG1025 Epidermal growth facto 100.0 2.3E-32 5E-37 305.5 19.5 248 473-738 699-957 (1177)
362 KOG1006 Mitogen-activated prot 100.0 3.5E-34 7.6E-39 284.5 4.5 252 458-730 59-324 (361)
363 cd07829 STKc_CDK_like Catalyti 100.0 2.8E-32 6E-37 291.7 19.4 248 472-731 1-277 (282)
364 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-32 2.4E-37 296.5 16.3 250 471-737 1-266 (288)
365 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-32 2.5E-37 304.5 16.7 254 469-733 4-300 (342)
366 KOG1035 eIF-2alpha kinase GCN2 100.0 5.5E-33 1.2E-37 323.4 14.7 256 466-734 475-872 (1351)
367 PTZ00024 cyclin-dependent prot 100.0 2.7E-32 5.9E-37 300.4 19.3 258 470-734 8-314 (335)
368 KOG3653 Transforming growth fa 100.0 1.5E-32 3.3E-37 292.7 16.1 247 474-739 214-504 (534)
369 KOG0614 cGMP-dependent protein 100.0 2.3E-33 5E-38 299.3 7.3 234 473-726 423-665 (732)
370 cd07851 STKc_p38 Catalytic dom 100.0 1.6E-32 3.4E-37 303.5 14.1 250 467-733 12-298 (343)
371 KOG0696 Serine/threonine prote 100.0 1.4E-32 3.1E-37 286.5 12.6 237 470-727 349-595 (683)
372 KOG4236 Serine/threonine prote 100.0 4.9E-33 1.1E-37 297.3 9.2 240 475-731 569-817 (888)
373 cd07857 STKc_MPK1 Catalytic do 100.0 7.2E-32 1.6E-36 296.8 18.9 255 471-734 1-293 (332)
374 cd05123 STKc_AGC Catalytic dom 100.0 6.8E-32 1.5E-36 283.4 17.6 230 478-728 1-239 (250)
375 KOG0607 MAP kinase-interacting 100.0 1.5E-32 3.2E-37 278.9 11.7 254 462-731 75-359 (463)
376 KOG2052 Activin A type IB rece 100.0 7.3E-32 1.6E-36 285.5 17.4 262 466-740 207-505 (513)
377 cd05576 STKc_RPK118_like Catal 100.0 1.1E-31 2.5E-36 280.6 17.4 218 481-729 4-225 (237)
378 KOG0587 Traf2- and Nck-interac 100.0 2E-31 4.2E-36 302.0 17.3 260 460-735 9-284 (953)
379 cd05610 STKc_MASTL Catalytic d 100.0 5.5E-31 1.2E-35 314.4 22.2 143 470-618 4-153 (669)
380 KOG0200 Fibroblast/platelet-de 100.0 5E-31 1.1E-35 310.4 20.1 253 469-738 295-579 (609)
381 KOG0603 Ribosomal protein S6 k 100.0 1.3E-31 2.9E-36 296.5 13.1 238 468-736 320-566 (612)
382 KOG0666 Cyclin C-dependent kin 100.0 3.3E-32 7.2E-37 275.6 7.2 200 470-676 24-241 (438)
383 KOG0671 LAMMER dual specificit 100.0 1.9E-31 4.1E-36 278.2 8.1 253 468-735 87-408 (415)
384 KOG0695 Serine/threonine prote 100.0 5.5E-31 1.2E-35 268.2 9.0 246 470-728 250-505 (593)
385 smart00220 S_TKc Serine/Threon 100.0 5E-30 1.1E-34 266.3 16.4 231 482-731 1-239 (244)
386 KOG0669 Cyclin T-dependent kin 100.0 2.6E-31 5.7E-36 261.9 5.0 256 471-734 18-316 (376)
387 PLN03224 probable serine/threo 100.0 1.1E-29 2.5E-34 289.3 19.2 258 468-733 143-500 (507)
388 KOG0662 Cyclin-dependent kinas 100.0 5.9E-30 1.3E-34 240.6 11.7 249 471-731 3-281 (292)
389 PLN03225 Serine/threonine-prot 100.0 1.5E-29 3.3E-34 295.1 17.2 256 468-735 130-452 (566)
390 KOG1027 Serine/threonine prote 100.0 1.2E-30 2.6E-35 294.4 6.8 248 472-735 511-769 (903)
391 KOG0984 Mitogen-activated prot 100.0 1.3E-29 2.8E-34 243.8 9.9 205 465-679 41-256 (282)
392 KOG1024 Receptor-like protein 100.0 6.7E-29 1.5E-33 258.2 12.2 263 461-739 275-556 (563)
393 KOG0668 Casein kinase II, alph 100.0 2.8E-28 6.2E-33 237.6 10.4 247 469-734 37-323 (338)
394 KOG0664 Nemo-like MAPK-related 99.9 3.9E-29 8.4E-34 248.9 3.0 252 471-734 54-344 (449)
395 KOG0576 Mitogen-activated prot 99.9 9.2E-29 2E-33 272.4 6.0 251 469-733 14-271 (829)
396 KOG0670 U4/U6-associated splic 99.9 2.2E-28 4.8E-33 262.0 7.3 258 465-735 427-748 (752)
397 cd00180 PKc Catalytic domain o 99.9 1.4E-26 3.1E-31 234.0 19.6 204 478-730 1-211 (215)
398 KOG1290 Serine/threonine prote 99.9 7.7E-27 1.7E-31 249.6 16.9 128 470-602 78-221 (590)
399 KOG0665 Jun-N-terminal kinase 99.9 2E-27 4.4E-32 242.8 10.8 252 469-737 16-314 (369)
400 smart00221 STYKc Protein kinas 99.9 1.2E-25 2.6E-30 231.3 19.2 196 472-677 1-202 (225)
401 KOG1152 Signal transduction se 99.9 3.6E-27 7.8E-32 255.9 7.2 193 470-676 561-770 (772)
402 KOG1345 Serine/threonine kinas 99.9 2.5E-26 5.3E-31 229.3 5.7 237 470-728 24-279 (378)
403 KOG1167 Serine/threonine prote 99.9 1.6E-25 3.4E-30 237.3 10.1 260 465-735 31-383 (418)
404 PLN00181 protein SPA1-RELATED; 99.9 2.4E-25 5.1E-30 272.2 11.5 201 521-735 28-267 (793)
405 cd01989 STK_N The N-terminal d 99.9 3.7E-24 8E-29 206.5 17.3 144 24-175 1-146 (146)
406 smart00750 KIND kinase non-cat 99.9 4.8E-24 1E-28 212.1 14.7 162 548-735 1-167 (176)
407 PRK09188 serine/threonine prot 99.9 6.1E-23 1.3E-27 224.9 13.8 173 463-650 11-195 (365)
408 KOG1164 Casein kinase (serine/ 99.9 6.3E-22 1.4E-26 216.7 18.7 261 471-741 19-300 (322)
409 KOG1165 Casein kinase (serine/ 99.9 8.7E-22 1.9E-26 202.1 18.3 258 469-739 27-300 (449)
410 KOG0195 Integrin-linked kinase 99.9 6.3E-23 1.4E-27 204.6 8.1 253 460-738 187-446 (448)
411 COG0515 SPS1 Serine/threonine 99.9 8.1E-21 1.8E-25 204.3 23.2 260 472-735 2-277 (384)
412 KOG1163 Casein kinase (serine/ 99.9 1.5E-21 3.3E-26 192.2 14.5 259 469-740 14-286 (341)
413 PRK10359 lipopolysaccharide co 99.8 9.7E-21 2.1E-25 193.5 7.4 169 468-669 29-216 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.8 5.4E-20 1.2E-24 185.4 10.5 138 475-619 2-167 (190)
415 KOG1240 Protein kinase contain 99.8 1.4E-20 3E-25 218.1 6.6 246 471-731 24-289 (1431)
416 KOG0590 Checkpoint kinase and 99.8 2.2E-20 4.7E-25 217.8 7.1 250 473-731 321-583 (601)
417 PRK12274 serine/threonine prot 99.8 1.3E-19 2.7E-24 181.5 10.6 189 473-676 5-208 (218)
418 PRK15456 universal stress prot 99.8 3.9E-19 8.4E-24 170.7 13.4 139 23-173 3-142 (142)
419 cd05145 RIO1_like RIO kinase f 99.8 4.5E-19 9.8E-24 179.0 13.6 140 475-621 2-169 (190)
420 KOG0603 Ribosomal protein S6 k 99.8 2.6E-20 5.6E-25 207.2 2.1 222 478-728 2-233 (612)
421 PRK15005 universal stress prot 99.8 1.6E-18 3.5E-23 166.7 14.0 140 23-173 3-144 (144)
422 PF14531 Kinase-like: Kinase-l 99.8 1.1E-18 2.5E-23 183.5 13.0 229 472-724 14-288 (288)
423 KOG4158 BRPK/PTEN-induced prot 99.8 2.8E-18 6E-23 179.9 12.4 201 523-737 274-513 (598)
424 PRK10345 hypothetical protein; 99.7 7.1E-18 1.5E-22 171.8 12.3 134 473-616 5-156 (210)
425 cd01987 USP_OKCHK USP domain i 99.7 1.7E-17 3.7E-22 155.3 13.4 122 24-172 1-123 (124)
426 KOG1023 Natriuretic peptide re 99.7 5.1E-18 1.1E-22 189.4 10.2 210 519-739 1-225 (484)
427 PRK15118 universal stress glob 99.7 1.8E-17 4E-22 159.4 12.1 136 22-174 3-139 (144)
428 PRK09982 universal stress prot 99.7 2.8E-17 6E-22 157.9 11.7 134 23-173 4-138 (142)
429 KOG1166 Mitotic checkpoint ser 99.7 2.7E-17 5.8E-22 195.4 13.8 198 463-673 691-901 (974)
430 cd01988 Na_H_Antiporter_C The 99.7 1.4E-16 3E-21 150.4 14.0 131 24-173 1-132 (132)
431 KOG1033 eIF-2alpha kinase PEK/ 99.7 5.6E-18 1.2E-22 185.3 3.8 177 537-728 330-507 (516)
432 PRK14879 serine/threonine prot 99.7 1.3E-16 2.8E-21 163.7 12.1 132 476-618 2-143 (211)
433 KOG0606 Microtubule-associated 99.7 3.4E-17 7.4E-22 190.4 7.9 213 469-728 82-307 (1205)
434 PF00582 Usp: Universal stress 99.7 4E-16 8.6E-21 147.5 13.5 137 23-173 3-140 (140)
435 TIGR03724 arch_bud32 Kae1-asso 99.7 1.2E-16 2.7E-21 162.3 10.3 129 477-619 1-139 (199)
436 smart00090 RIO RIO-like kinase 99.7 1.6E-16 3.6E-21 165.6 11.3 142 471-620 29-199 (237)
437 PRK09605 bifunctional UGMP fam 99.6 3.8E-16 8.1E-21 182.7 11.8 142 463-619 326-477 (535)
438 PRK10116 universal stress prot 99.6 1.7E-15 3.6E-20 145.3 14.1 135 22-173 3-138 (142)
439 cd05144 RIO2_C RIO kinase fami 99.6 7E-16 1.5E-20 156.9 12.0 143 464-620 9-176 (198)
440 PRK11175 universal stress prot 99.6 1.2E-14 2.6E-19 158.1 14.9 144 22-175 3-147 (305)
441 cd05120 APH_ChoK_like Aminogly 99.6 1.4E-14 3E-19 138.9 11.8 133 474-618 2-138 (155)
442 cd05119 RIO RIO kinase family, 99.6 8.5E-15 1.8E-19 147.2 10.2 136 475-620 2-165 (187)
443 cd00293 USP_Like Usp: Universa 99.5 1E-13 2.2E-18 129.4 13.2 129 24-172 1-130 (130)
444 PRK01723 3-deoxy-D-manno-octul 99.5 5.6E-14 1.2E-18 146.9 12.3 133 475-618 36-191 (239)
445 PRK11175 universal stress prot 99.5 8.4E-14 1.8E-18 151.4 14.1 141 21-173 151-299 (305)
446 COG0589 UspA Universal stress 99.5 6E-13 1.3E-17 128.6 14.9 145 22-174 5-152 (154)
447 KOG0590 Checkpoint kinase and 99.5 6.4E-15 1.4E-19 172.2 0.5 247 470-729 20-282 (601)
448 KOG1266 Protein kinase [Signal 99.4 2.6E-13 5.7E-18 140.1 4.7 207 516-735 118-333 (458)
449 TIGR01982 UbiB 2-polyprenylphe 99.3 3.9E-12 8.5E-17 144.4 11.7 137 476-620 123-308 (437)
450 cd05151 ChoK Choline Kinase (C 99.3 4.5E-12 9.8E-17 125.1 9.7 130 476-618 4-136 (170)
451 KOG0601 Cyclin-dependent kinas 99.2 5.5E-12 1.2E-16 141.4 5.3 243 471-728 115-374 (524)
452 PF04564 U-box: U-box domain; 99.2 6.8E-12 1.5E-16 105.3 3.4 71 746-816 1-71 (73)
453 cd05146 RIO3_euk RIO kinase fa 99.1 8.4E-10 1.8E-14 110.8 13.5 135 476-620 3-175 (197)
454 PRK12652 putative monovalent c 99.1 4.1E-10 9E-15 122.9 12.2 102 22-142 5-122 (357)
455 COG4248 Uncharacterized protei 99.1 2.6E-09 5.7E-14 114.3 16.9 251 474-739 15-301 (637)
456 PRK04750 ubiB putative ubiquin 99.1 3.2E-10 7E-15 130.4 10.7 143 469-622 119-317 (537)
457 KOG1243 Protein kinase [Genera 99.1 6.7E-10 1.5E-14 125.7 12.7 162 492-671 36-199 (690)
458 KOG0606 Microtubule-associated 99.1 7.3E-11 1.6E-15 138.4 4.2 249 468-728 802-1084(1205)
459 COG3642 Mn2+-dependent serine/ 99.1 1.3E-09 2.9E-14 105.7 11.8 128 477-618 3-140 (204)
460 KOG0601 Cyclin-dependent kinas 99.0 2.6E-10 5.7E-15 128.0 7.6 248 457-728 251-509 (524)
461 cd05154 ACAD10_11_like Acyl-Co 99.0 1.2E-09 2.6E-14 112.4 12.0 139 476-618 4-206 (223)
462 KOG3087 Serine/threonine prote 99.0 4.9E-09 1.1E-13 101.3 12.3 141 474-618 11-165 (229)
463 KOG3741 Poly(A) ribonuclease s 98.8 4.9E-08 1.1E-12 107.4 15.7 207 483-728 289-516 (655)
464 PRK15123 lipopolysaccharide co 98.7 1E-07 2.2E-12 101.1 13.5 136 478-617 30-193 (268)
465 PRK10490 sensor protein KdpD; 98.7 1.6E-07 3.4E-12 116.3 15.3 124 21-173 249-373 (895)
466 PF01163 RIO1: RIO1 family; I 98.7 1.3E-07 2.9E-12 94.6 11.8 125 485-620 1-157 (188)
467 KOG2137 Protein kinase [Signal 98.6 2E-08 4.2E-13 114.5 1.7 152 572-728 105-260 (700)
468 PRK09902 hypothetical protein; 98.5 8.7E-07 1.9E-11 89.4 13.0 152 462-618 10-179 (216)
469 COG0478 RIO-like serine/threon 98.5 9.5E-07 2.1E-11 91.1 10.7 134 472-618 93-251 (304)
470 PF06293 Kdo: Lipopolysacchari 98.5 7.3E-07 1.6E-11 91.2 9.9 123 491-619 30-171 (206)
471 COG2205 KdpD Osmosensitive K+ 98.4 3E-06 6.5E-11 98.3 13.8 131 21-178 247-378 (890)
472 PF12260 PIP49_C: Protein-kina 98.2 2.5E-05 5.4E-10 78.5 14.6 106 513-620 7-113 (188)
473 PF06176 WaaY: Lipopolysacchar 98.2 5.5E-06 1.2E-10 83.9 9.7 135 468-617 29-182 (229)
474 COG0661 AarF Predicted unusual 98.2 3E-06 6.5E-11 97.2 8.9 138 476-621 131-317 (517)
475 PF01636 APH: Phosphotransfera 98.2 8.3E-06 1.8E-10 84.3 10.7 141 476-618 3-197 (239)
476 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.1E-05 2.3E-10 83.8 11.4 137 476-618 7-182 (226)
477 smart00504 Ubox Modified RING 98.1 1.4E-06 3.1E-11 70.9 3.0 62 750-812 2-63 (63)
478 KOG1235 Predicted unusual prot 98.1 1.3E-05 2.8E-10 91.7 9.5 139 476-621 167-357 (538)
479 COG1718 RIO1 Serine/threonine 98.0 7.2E-05 1.6E-09 76.7 12.4 151 461-620 36-217 (268)
480 cd05150 APH Aminoglycoside 3'- 97.9 5.6E-05 1.2E-09 79.3 11.2 137 478-617 6-192 (244)
481 COG2112 Predicted Ser/Thr prot 97.9 7.4E-05 1.6E-09 72.6 9.5 130 473-618 25-155 (201)
482 KOG0576 Mitogen-activated prot 97.8 2.9E-06 6.4E-11 95.9 -0.6 186 469-676 241-431 (829)
483 PLN02876 acyl-CoA dehydrogenas 97.8 0.00016 3.6E-09 89.2 14.2 147 475-621 43-260 (822)
484 cd05155 APH_ChoK_like_1 Unchar 97.8 0.00013 2.9E-09 76.1 10.4 71 476-551 3-82 (235)
485 TIGR02721 ycfN_thiK thiamine k 97.7 8.9E-05 1.9E-09 78.5 8.3 138 478-618 4-175 (256)
486 cd01984 AANH_like Adenine nucl 97.7 9.6E-05 2.1E-09 64.1 6.5 84 25-171 1-85 (86)
487 cd05157 ETNK_euk Ethanolamine 97.6 0.00034 7.4E-09 72.9 10.5 139 476-617 4-200 (235)
488 PRK09550 mtnK methylthioribose 97.5 0.00089 1.9E-08 74.9 13.1 74 476-549 32-117 (401)
489 PRK10593 hypothetical protein; 97.5 0.0007 1.5E-08 73.3 12.0 73 476-550 20-100 (297)
490 PF13095 FTA2: Kinetochore Sim 97.5 0.00052 1.1E-08 68.9 10.1 132 456-616 28-206 (207)
491 PRK05231 homoserine kinase; Pr 97.5 0.0009 1.9E-08 73.2 12.8 155 460-617 7-216 (319)
492 cd05153 HomoserineK_II Homoser 97.5 0.00045 9.8E-09 74.7 9.6 140 475-617 19-204 (296)
493 PF10707 YrbL-PhoP_reg: PhoP r 97.4 0.0013 2.9E-08 66.4 11.8 129 475-615 6-169 (199)
494 TIGR00938 thrB_alt homoserine 97.4 0.0014 3E-08 71.4 12.0 141 475-617 27-216 (307)
495 KOG4642 Chaperone-dependent E3 97.3 0.00014 3.1E-09 73.1 3.5 75 742-816 204-278 (284)
496 cd05156 ChoK_euk Choline Kinas 97.3 0.0012 2.6E-08 71.6 10.6 139 476-617 4-212 (302)
497 KOG1035 eIF-2alpha kinase GCN2 97.3 0.00067 1.4E-08 82.3 9.0 197 513-738 230-439 (1351)
498 KOG1826 Ras GTPase activating 97.2 8.1E-05 1.7E-09 91.4 0.3 158 513-676 1277-1441(2724)
499 PLN02236 choline kinase 97.0 0.0045 9.8E-08 68.5 11.1 138 477-617 43-230 (344)
500 KOG2268 Serine/threonine prote 96.9 0.00092 2E-08 70.8 4.4 147 460-620 79-253 (465)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-51 Score=447.55 Aligned_cols=275 Identities=47% Similarity=0.776 Sum_probs=240.4
Q ss_pred cCcccCHHHHHHHhcCCCccceeeeecceEEEEEEEcC-eEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc
Q 003481 456 ESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLG-RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 534 (816)
Q Consensus 456 ~~~~~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~g-~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~ 534 (816)
....|++.+|..||++|+..+.||+||||.||+|.+.+ ..||||++.........+|.+|+.+|++++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 46779999999999999999999999999999999984 89999988766544144599999999999999999999999
Q ss_pred cC---CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEe
Q 003481 535 PE---AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKIC 611 (816)
Q Consensus 535 ~~---~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~ 611 (816)
.+ ..+||||||++|+|.++|+..... +++|..|++|+.++|.||+|||...+++||||||||+|||||.++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 53 279999999999999999887644 89999999999999999999999987789999999999999999999999
Q ss_pred ecccceeccC-CCCcCCCccccCCC-CCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCC---------ChHH
Q 003481 612 DFGICRLVTE-DTLYLPSFHRSTAP-KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG---------LAGE 680 (816)
Q Consensus 612 DFGla~~~~~-~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~---------~~~~ 680 (816)
|||+|+..+. ... .... .||.+|+||||+..+.++.|+|||||||+|+||+||+.|.. ...|
T Consensus 220 DFGLa~~~~~~~~~-------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w 292 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTS-------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEW 292 (361)
T ss_pred CccCcccCCccccc-------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHH
Confidence 9999976654 221 1111 79999999999999999999999999999999999998875 2455
Q ss_pred HHHHhhcCccccccCCCC--CCCCH-HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 681 VRRAVSCGKLSSILDPLA--GDWPT-FVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 681 ~~~~~~~~~~~~~~d~~~--~~~~~-~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
....+..+.+.+++|+.. ..++. .....+..++.+|++.+|.+||+|. ++++.|+.+.
T Consensus 293 ~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~-~Vv~~L~~~~ 353 (361)
T KOG1187|consen 293 AKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMS-QVVKELEGIL 353 (361)
T ss_pred HHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHH-HHHHHHHhhc
Confidence 667788889999999986 45664 5778899999999999999999999 5677776543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-45 Score=397.21 Aligned_cols=249 Identities=37% Similarity=0.598 Sum_probs=209.7
Q ss_pred cceeeeecceEEEEEEEcCeE-EEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccCC---ccceeeccCCC
Q 003481 475 SFKVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPEA---WSLVYEYLPNG 548 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~g~~-vAiK~l~~~~~~~--~~~~~~E~~il~~l~HpnIv~l~g~~~~~---~~lV~E~~~~g 548 (816)
...||.|+||+||+|.+.|.. ||||++....... ...|.+|+.+|.+++|||||+|+|+|.+. .+|||||+++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 345999999999999999988 9999997654333 45899999999999999999999999654 68999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC-CeeEeecccceeccCCCCcCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-~vkL~DFGla~~~~~~~~~~~ 627 (816)
+|.++|... ....+++..+++|+.|||.||.|||+.++ ||||||||+||||+.++ ++||+|||+++......
T Consensus 126 sL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---- 198 (362)
T KOG0192|consen 126 SLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---- 198 (362)
T ss_pred cHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc----
Confidence 999999885 23579999999999999999999999884 99999999999999998 99999999998876432
Q ss_pred CccccCCCCCCCCCCCccccc--cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCH
Q 003481 628 SFHRSTAPKGSFPYADPEYHR--TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~--~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
...+...||+.|||||++. ...|+.|+|||||||+||||+||+.||...... ...+..+. .....|.
T Consensus 199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~-------~Rp~~p~ 269 (362)
T KOG0192|consen 199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGG-------LRPPIPK 269 (362)
T ss_pred --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC-------CCCCCCc
Confidence 1234578999999999999 569999999999999999999999999865542 22221111 1223344
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
..+..+..|+.+||+.||..||++. +++..|+.+..
T Consensus 270 ~~~~~l~~l~~~CW~~dp~~RP~f~-ei~~~l~~~~~ 305 (362)
T KOG0192|consen 270 ECPPHLSSLMERCWLVDPSRRPSFL-EIVSRLESIMS 305 (362)
T ss_pred cCCHHHHHHHHHhCCCCCCcCCCHH-HHHHHHHHHHH
Confidence 4677899999999999999999999 78888887754
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7e-45 Score=379.18 Aligned_cols=250 Identities=30% Similarity=0.430 Sum_probs=210.3
Q ss_pred cCHHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc-
Q 003481 460 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP- 535 (816)
Q Consensus 460 ~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~- 535 (816)
++..||+.. ..||+|..|+||++++. ++.+|+|++.... ...++++.+|++++...+|||||.+||+|.
T Consensus 76 i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 455566544 56999999999999987 8899999995443 345668999999999999999999999983
Q ss_pred -C-CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceeeCCCCCCceEecCCCCeeEee
Q 003481 536 -E-AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELSSKICD 612 (816)
Q Consensus 536 -~-~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~ivHrDIkp~NILl~~~~~vkL~D 612 (816)
. ..+|+||||++|||++++...+ .+++...-+|+.+|++||.|||. .+ ||||||||+|||++..|.|||||
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicD 222 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICD 222 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEecc
Confidence 3 3789999999999999997653 58899999999999999999996 66 99999999999999999999999
Q ss_pred cccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCCh-----HHHHHHhhc
Q 003481 613 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA-----GEVRRAVSC 687 (816)
Q Consensus 613 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~-----~~~~~~~~~ 687 (816)
||.++.+.... ....+||..|||||.+.+..|+.++||||||++++|+.+|+.||... +++ .
T Consensus 223 FGVS~~lvnS~--------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~-~---- 289 (364)
T KOG0581|consen 223 FGVSGILVNSI--------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF-E---- 289 (364)
T ss_pred ccccHHhhhhh--------cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH-H----
Confidence 99999876542 35678999999999999999999999999999999999999999653 221 1
Q ss_pred CccccccCCCCCCCCHH-HHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 688 GKLSSILDPLAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~-~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
-+..+++...+..|.. .++++..++..||++||.+||++.+.+.|.+-
T Consensus 290 -Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 290 -LLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred -HHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHH
Confidence 1223344334455664 88899999999999999999999987766654
No 4
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-45 Score=364.88 Aligned_cols=253 Identities=25% Similarity=0.375 Sum_probs=210.6
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecc-ccC--C-cccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGA-CPE--A-WSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~-~~~--~-~~lV~ 542 (816)
+|.+.++||.|.||+||++... |..||.|.+...... .......|+.+|++|+|||||+++++ |.+ . .+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 4666778999999999999774 899999999866543 34468899999999999999999984 432 2 78999
Q ss_pred eccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-ceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 543 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPE-KIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
|||..|+|..++.... ....++++.+|+++.|++.||..+|+.-+. -|+||||||.||+|+.+|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 9999999999987543 345689999999999999999999994422 39999999999999999999999999999987
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCccccccCCCC
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~d~~~ 698 (816)
.... .....+|||.||+||.+...+|++||||||+||++|||+.-++||...+ .....+..|.+..
T Consensus 180 s~~t------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~------ 247 (375)
T KOG0591|consen 180 SKTT------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPP------ 247 (375)
T ss_pred chhH------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCC------
Confidence 6553 3467799999999999999999999999999999999999999997553 2344455554432
Q ss_pred CCCC-HHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 699 GDWP-TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 699 ~~~~-~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
.| ..++..+..||..|+..||..||+....+.+.-..
T Consensus 248 --~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 248 --LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred --CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 24 67899999999999999999999966455444443
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-44 Score=392.93 Aligned_cols=246 Identities=26% Similarity=0.399 Sum_probs=214.1
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
..|...+.||+|||+.||.+++. |..||+|++.+... ...+.+.+|++|.+.|+|||||+++++|++ +.|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 46899999999999999999983 99999999987543 334568899999999999999999999976 489999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
|+|++++|..++.+. .++++.++..++.||+.||.|||+.+ |+|||||..||||+++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999999754 47999999999999999999999988 999999999999999999999999999998754
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCCh--HHHHHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA--GEVRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~--~~~~~~~~~~~~~~~~d~~~~~ 700 (816)
. .+..+.+|||.|+|||++....++..+||||+|||||-||+|++||... .+....+..... .
T Consensus 172 ~------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y---------~ 236 (592)
T KOG0575|consen 172 G------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY---------S 236 (592)
T ss_pred c------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc---------c
Confidence 3 2457789999999999999999999999999999999999999999743 334444433322 2
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
.|...+....+||.++|+.||.+|||+.++|.+.+=
T Consensus 237 ~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 237 MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred cccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 455677889999999999999999999988777664
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=372.25 Aligned_cols=248 Identities=30% Similarity=0.428 Sum_probs=206.8
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccC--CcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH--NMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E 543 (816)
++|.....||.|+||+||+|++. +..||||.+.+. .....+-+..|+.+|+.++|||||.|++++ .+..|||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 57888889999999999999986 889999999877 344556678999999999999999999998 456899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC------CCeeEeecccce
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE------LSSKICDFGICR 617 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~------~~vkL~DFGla~ 617 (816)
||+||+|.++|...+ .+++..+..++.|||.||++||+++ ||||||||.||||+.+ -.+||+|||+|+
T Consensus 90 yC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred eCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999998876 5888999999999999999999988 9999999999999765 458999999999
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCccccccC
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILD 695 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~d 695 (816)
.+.++. ...+.+|++.|||||++..++|+.|+|+||+|+|||+|++|++||.... +....+..++-.
T Consensus 164 ~L~~~~-------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~---- 232 (429)
T KOG0595|consen 164 FLQPGS-------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI---- 232 (429)
T ss_pred hCCchh-------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc----
Confidence 988655 2456789999999999999999999999999999999999999997433 333333333211
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
....+...+..+.+|+...++.+|.+|-+..+-+.+.+-
T Consensus 233 --~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l 271 (429)
T KOG0595|consen 233 --VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFL 271 (429)
T ss_pred --cCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhc
Confidence 123344455567788888888888888888765555553
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-44 Score=376.09 Aligned_cols=248 Identities=25% Similarity=0.354 Sum_probs=205.9
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc-------HHHHHHHHHHHhcCCCCceeeEecccc--C
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG-------QLEFQQEVRVLSKLQHPHLVTLLGACP--E 536 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~-------~~~~~~E~~il~~l~HpnIv~l~g~~~--~ 536 (816)
..+.|...+.||+|+||.|-+|... |+.||||++++..... ...+.+|+++|++|+|||||+++++|. +
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4456788899999999999999775 8999999997754322 223579999999999999999999994 4
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC---CCeeEeec
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDF 613 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~---~~vkL~DF 613 (816)
..|+||||+.||.|.+.+...+ .+.+..-..++.|++.|+.|||+.| |+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence 5799999999999999998765 3666777889999999999999998 9999999999999766 78999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCC---CcchhHhHHHHHHHHHHhCCCCCCChH---HHHHHhhc
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL---TPKSDSYSFGLIILQLLTGRLPVGLAG---EVRRAVSC 687 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~---s~ksDVwSlGviL~elltG~~Pf~~~~---~~~~~~~~ 687 (816)
|+|+...... .+.+.+|||.|.|||++.+..+ ..++|+||+||+||-+++|.+||.... ...+.+..
T Consensus 324 GlAK~~g~~s-------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~ 396 (475)
T KOG0615|consen 324 GLAKVSGEGS-------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK 396 (475)
T ss_pred chhhccccce-------ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence 9999887544 4578899999999999977643 348899999999999999999996322 25566666
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 688 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
|.+... +..-..++++..+||.+||..||++||++.++|.+
T Consensus 397 G~y~f~-----p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 397 GRYAFG-----PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred Cccccc-----ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 765432 12234578899999999999999999999976643
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=362.45 Aligned_cols=238 Identities=29% Similarity=0.393 Sum_probs=203.6
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccce
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV 541 (816)
.++|.+.+.||+|+||.||.++.. ++.+|+|++++.... ......+|..||..++||+||+++..|++ .+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 356899999999999999999764 889999999887543 34568899999999999999999999954 59999
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
++|+.||.|..+|.+.. .+++..+.-++.+|+.||.|||+.+ ||||||||+|||||.+|+++|+|||+|+..-.
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999998765 4777888899999999999999988 99999999999999999999999999996554
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCccccccCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~ 699 (816)
... .+...+||+.|||||++.+.+|+..+|+|||||++|||++|.+||...+ .....+..+++.
T Consensus 178 ~~~------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~-------- 243 (357)
T KOG0598|consen 178 DGD------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLP-------- 243 (357)
T ss_pred CCC------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCC--------
Confidence 432 2355799999999999999999999999999999999999999997544 344455555422
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCC
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs 726 (816)
..|...+....+|+.+.|..||.+|-.
T Consensus 244 ~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 244 LPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred CCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 234446678999999999999999963
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-42 Score=376.93 Aligned_cols=249 Identities=33% Similarity=0.512 Sum_probs=210.3
Q ss_pred CccceeeeecceEEEEEEEcCe-EEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCc
Q 003481 473 SESFKVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 549 (816)
Q Consensus 473 ~~~~~LG~G~~g~Vy~~~~~g~-~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gs 549 (816)
...+.||+|-||.||.|.+++. .||+|.++.... ....|.+|+.+|.+|+|+|||+|+|+|.. ..+||||||+.|+
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~Gs 287 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGS 287 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCc
Confidence 3456799999999999999976 899999987643 34578899999999999999999999954 3799999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCc
Q 003481 550 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 629 (816)
Q Consensus 550 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 629 (816)
|.++|.... ...+...+.+.++.|||.|++||++++ +|||||...||||++++.+||+|||+|+...++...
T Consensus 288 Ll~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~---- 359 (468)
T KOG0197|consen 288 LLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT---- 359 (468)
T ss_pred HHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCcee----
Confidence 999998733 356888999999999999999999988 999999999999999999999999999955544321
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCCh--HHHHHHhhcCccccccCCCCCCCCHHHH
Q 003481 630 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLA--GEVRRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 630 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
......-..-|.|||.+..+.++.|||||||||+||||+| |+.||... .++...+..|... ..|..++
T Consensus 360 -~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl--------p~P~~CP 430 (468)
T KOG0197|consen 360 -ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL--------PRPEGCP 430 (468)
T ss_pred -ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC--------CCCCCCC
Confidence 2233345567999999999999999999999999999999 99998644 3455666666432 3356677
Q ss_pred HHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 707 RRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
..+.+|+..||+.+|++|||+. .|...|+.+..
T Consensus 431 ~~vY~lM~~CW~~~P~~RPtF~-~L~~~l~~~~~ 463 (468)
T KOG0197|consen 431 DEVYELMKSCWHEDPEDRPTFE-TLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHHHhhCCcccCCCHH-HHHHHHHHhhh
Confidence 8999999999999999999999 78888877643
No 10
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.5e-40 Score=359.67 Aligned_cols=246 Identities=24% Similarity=0.290 Sum_probs=197.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~---~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|..+..||+|+||.||+++-. |..+|+|++++..+.. ...+..|-++|....+|+||+||..|.+ .+||||
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM 220 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM 220 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence 46788889999999999999764 9999999999876643 3457889999999999999999999955 589999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||++||++..+|.+.+ .|+...+..++.+++.|+..||+.| +|||||||+|+|||..|++||+|||||.-+...
T Consensus 221 EylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 221 EYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999998765 6888999999999999999999998 999999999999999999999999999643210
Q ss_pred CC-----------------cCCCcc------------------------ccCCCCCCCCCCCccccccCCCCcchhHhHH
Q 003481 623 TL-----------------YLPSFH------------------------RSTAPKGSFPYADPEYHRTGVLTPKSDSYSF 661 (816)
Q Consensus 623 ~~-----------------~~~~~~------------------------~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSl 661 (816)
.. ....+. .....+|||.|||||++.+..|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 00 000000 0114689999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCChH--HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 662 GLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 662 GviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
|||+||||.|.+||.... ..+..+...+.. +.-|. ....+.+..+||.+||. ||.+|-..
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-l~fP~----~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRET-LKFPE----EVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-ccCCC----cCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 999999999999996433 344433332211 10111 11244789999999999 99999883
No 11
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=366.33 Aligned_cols=251 Identities=28% Similarity=0.365 Sum_probs=208.6
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcC-CCCceeeEeccccC--Cccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV 541 (816)
++|.+++.||.|+|++||+|+.. ++.||||++.+.... ..+.+..|-.+|.+| .||.|++||..|.+ .+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 56888889999999999999875 899999999776432 234577899999999 89999999999965 49999
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
+||+++|+|.++|.+.+ .|++.....++.+|+.||+|||++| ||||||||+|||||.|+++||+|||.|+.+++
T Consensus 153 Le~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 99999999999998775 5788888999999999999999998 99999999999999999999999999999875
Q ss_pred CCCc-----CCC--ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCcccccc
Q 003481 622 DTLY-----LPS--FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSIL 694 (816)
Q Consensus 622 ~~~~-----~~~--~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 694 (816)
.... ... .......+||..|.+||++..+..++.+|+|+||||||+|+.|++||...++..-.- ++.
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq---kI~--- 300 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ---KIQ--- 300 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH---HHH---
Confidence 4332 111 111256899999999999999999999999999999999999999998766532211 111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
...-.||...++...+|+.+.|..||.+|++..++-.|
T Consensus 301 -~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 301 -ALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred -HhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11234566666889999999999999999999754443
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-41 Score=354.46 Aligned_cols=257 Identities=29% Similarity=0.457 Sum_probs=209.5
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cC--Ccccee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PE--AWSLVY 542 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~--~~~lV~ 542 (816)
..+|...+.||+|+||.||++... |...|||.+...+....+.+.+|+.+|++++|||||+++|.. .+ .++++|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 346778889999999999999886 799999998766433356688999999999999999999963 34 488999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC-CCCeeEeecccceeccC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFGICRLVTE 621 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~-~~~vkL~DFGla~~~~~ 621 (816)
||+++|+|.+++.+.+. .|++..+..+..||+.||.|||+++ ||||||||+||||+. ++.+||+|||+++....
T Consensus 96 Ey~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999999987764 6999999999999999999999987 999999999999999 79999999999987764
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCC-CCcchhHhHHHHHHHHHHhCCCCCCCh-HHHHHHhhcCccccccCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGV-LTPKSDSYSFGLIILQLLTGRLPVGLA-GEVRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~-~~~~~~~~~~~~~~~~d~~~~ 699 (816)
... .........||+.|||||++..+. ..+++|||||||+++||+||++||... ......+..+.-. ..+
T Consensus 171 ~~~---~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-----~~P 242 (313)
T KOG0198|consen 171 KGT---KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-----SLP 242 (313)
T ss_pred ccc---cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-----CCC
Confidence 111 112345678999999999998643 345999999999999999999999752 2222222222111 223
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.+|...+....+++.+|+..+|.+|||+.+.|.+.+...
T Consensus 243 ~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 243 EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 667778889999999999999999999998777776543
No 13
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=335.42 Aligned_cols=230 Identities=29% Similarity=0.407 Sum_probs=202.8
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~---~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
+|.....||.|+||.|.+++.. |..+|+|++.+...-. .+...+|..+|+.+.||++++|++.|.+ ..++|||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 4667788999999999999886 8899999998775543 3457799999999999999999998855 4899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|++||.|..+|.+.+ +++.+.+.-++.||+.||+|||+.+ |++|||||+|||||.+|.+||+|||+|+.+...
T Consensus 125 yv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 125 YVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred ccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence 999999999998765 5888999999999999999999988 999999999999999999999999999998653
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~ 701 (816)
+.+.+|||.|+|||++...+|+.++|+|||||++|||+.|.+||..... +...+..|++ .+
T Consensus 198 --------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v---------~f 260 (355)
T KOG0616|consen 198 --------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV---------KF 260 (355)
T ss_pred --------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc---------cC
Confidence 3567899999999999999999999999999999999999999975543 4455555544 46
Q ss_pred CHHHHHHHHHHHHHhhccCCCCC
Q 003481 702 PTFVARRLVDLGLQCCELYGRER 724 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~R 724 (816)
|...+..+.+|+...|+.|-.+|
T Consensus 261 P~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 261 PSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred CcccCHHHHHHHHHHHhhhhHhh
Confidence 77788899999999999999999
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1e-40 Score=336.60 Aligned_cols=250 Identities=24% Similarity=0.357 Sum_probs=200.0
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
+.|+...++|+|+||.||++++. |+.||||++..... .-.+-..+|+++|++|+|+|+|.|+.+|. ..++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35777889999999999999885 99999999865433 22344679999999999999999999994 45899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc-CC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT-ED 622 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~-~~ 622 (816)
||+..-|.+ |.... ..++...+.+++.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+.+. ++
T Consensus 82 ~~dhTvL~e-Le~~p--~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 82 YCDHTVLHE-LERYP--NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred ecchHHHHH-HHhcc--CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 997755544 44433 35788999999999999999999998 9999999999999999999999999999987 43
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc----Cc--------
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK-------- 689 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----~~-------- 689 (816)
. ..+..+.|.+|.|||.+.+ -+|+..+||||+||++.||++|.+.|.+..++.+.... |.
T Consensus 156 d-------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~i 228 (396)
T KOG0593|consen 156 D-------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSI 228 (396)
T ss_pred c-------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHH
Confidence 3 2467789999999998877 68999999999999999999999999776665543211 11
Q ss_pred ------cccccCCCC-------CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 690 ------LSSILDPLA-------GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 690 ------~~~~~d~~~-------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+..+.-|.. ..+| ..+.-+.+|+..||+.||.+|++..+.+.+
T Consensus 229 F~~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 229 FSSNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred hccCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 111111111 1122 345578999999999999999999876544
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=362.36 Aligned_cols=249 Identities=27% Similarity=0.418 Sum_probs=213.2
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceeeccC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLP 546 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~~~ 546 (816)
.|....+||+|..|.||.+... +..||||++........+-+.+|+.+|+..+|+|||.++..| .+.+++|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 3555568999999999999775 788999999888777777789999999999999999999887 567999999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
||+|.|.+... .+++.++..|+.+++.||+|||..+ |+|||||.+||||+.+|.+||+|||+|..+.....
T Consensus 354 ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-- 424 (550)
T KOG0578|consen 354 GGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-- 424 (550)
T ss_pred CCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC--
Confidence 99999988553 4899999999999999999999988 99999999999999999999999999998876542
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhcCccccccCCCCCCCCHH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~ 704 (816)
.....+|||+|||||+.....|++|.||||||++++||+-|.+||-..+.++.. +...... .-..+..
T Consensus 425 ----KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P------~lk~~~k 494 (550)
T KOG0578|consen 425 ----KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP------KLKNPEK 494 (550)
T ss_pred ----ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCC------CcCCccc
Confidence 457789999999999999999999999999999999999999999644443322 2211111 1234667
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
++..|.+++.+||+.|+.+||++.++|.+.+-.+
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 8899999999999999999999998887776544
No 16
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.1e-40 Score=355.77 Aligned_cols=247 Identities=29% Similarity=0.385 Sum_probs=211.7
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
++|.+.+.||+|+||.||+|+.. .+.||||.+.+.... ....+.+|++|++.++|||||.++.+|+. +.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46888889999999999999875 688999999765433 34568899999999999999999999965 5899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+.| +|..+|.... .++++.+..|+.+++.||.|||+++ |+|||+||.||||+.+|++|+||||+|+......
T Consensus 82 ~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred hhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 9976 9999997765 4889999999999999999999988 9999999999999999999999999999887644
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCH
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
. ..+...|||.|||||...+++|+..+|.||+|||||||++|++||.. ..+...+.. +-.....||.
T Consensus 155 ~------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-~si~~Lv~~------I~~d~v~~p~ 221 (808)
T KOG0597|consen 155 S------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-RSITQLVKS------ILKDPVKPPS 221 (808)
T ss_pred e------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-HHHHHHHHH------HhcCCCCCcc
Confidence 2 45778899999999999999999999999999999999999999953 223222211 1112235777
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
..+..+.+++...|.+||..|.+..+.+-|.+-
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~ 254 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFW 254 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhcChHH
Confidence 899999999999999999999999987777663
No 17
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2e-39 Score=357.63 Aligned_cols=255 Identities=29% Similarity=0.455 Sum_probs=203.7
Q ss_pred hcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC---
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--- 536 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--- 536 (816)
.++|.+.+.||+|+||.||+|.+. +..||+|++..... .....+.+|+.+|.++ +||||++++|+|..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 467889999999999999999752 46799999875432 2345688999999999 89999999998843
Q ss_pred CccceeeccCCCchhhhhhhcCC---------------------------------------------------------
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSN--------------------------------------------------------- 559 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~--------------------------------------------------------- 559 (816)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 36899999999999999875321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCC
Q 003481 560 --VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG 637 (816)
Q Consensus 560 --~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~g 637 (816)
..++++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........ .......+
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~~~~ 238 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKGSARL 238 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcch----hcccCCCC
Confidence 135889999999999999999999987 999999999999999999999999999876433211 12234456
Q ss_pred CCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH---HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 003481 638 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLG 713 (816)
Q Consensus 638 t~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li 713 (816)
++.|+|||++.+..++.++|||||||+||||++ |..||.... .....+..+... ..+...+..+.+|+
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li 310 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM--------RAPENATPEIYRIM 310 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC--------CCCCCCCHHHHHHH
Confidence 788999999998999999999999999999997 999996432 222222222211 12334556899999
Q ss_pred HHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 714 LQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 714 ~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
.+||+.||.+||++. ++++.|+.+.
T Consensus 311 ~~cl~~dp~~RPs~~-el~~~l~~~~ 335 (338)
T cd05102 311 LACWQGDPKERPTFS-ALVEILGDLL 335 (338)
T ss_pred HHHccCChhhCcCHH-HHHHHHHHHH
Confidence 999999999999999 7888888653
No 18
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.8e-39 Score=345.16 Aligned_cols=256 Identities=18% Similarity=0.259 Sum_probs=207.2
Q ss_pred cCcccCHHHHHHHhcCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCCceeeEec
Q 003481 456 ESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHPHLVTLLG 532 (816)
Q Consensus 456 ~~~~~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~---~~~~~~E~~il~~l~HpnIv~l~g 532 (816)
..+.++..+| +......||+|++|.||+|.+.|+.||||++....... ...|.+|+.+|.+++||||++++|
T Consensus 11 ~~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 11 DIKCIESDDI-----DKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred cceecCHHHc-----CCCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 3445666666 33333679999999999999999999999997654433 356889999999999999999999
Q ss_pred cccC------CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCceeeCCCCCCceEecCC
Q 003481 533 ACPE------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS-KPEKIVHGDLKPQNILLDSE 605 (816)
Q Consensus 533 ~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~ivHrDIkp~NILl~~~ 605 (816)
+|.+ ..++||||+++|+|.+++.... .++|...+.++.+++.||.|||+. + ++||||||+|||++.+
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~ 159 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTEN 159 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCC
Confidence 8844 3679999999999999997643 588999999999999999999985 5 8899999999999999
Q ss_pred CCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHhHHHHHHHHHHhCCCCCCChH--HH
Q 003481 606 LSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EV 681 (816)
Q Consensus 606 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~ 681 (816)
+.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.... .+
T Consensus 160 ~~~kl~dfg~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~ 230 (283)
T PHA02988 160 YKLKIICHGLEKILSSPP---------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI 230 (283)
T ss_pred CcEEEcccchHhhhcccc---------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999999999988654321 23468899999999876 689999999999999999999999997543 22
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 682 RRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 682 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
...+..+... ...+...+..+.+|+.+||+.||.+||++. ++++.|+.+.
T Consensus 231 ~~~i~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~-ell~~l~~~~ 280 (283)
T PHA02988 231 YDLIINKNNS-------LKLPLDCPLEIKCIVEACTSHDSIKRPNIK-EILYNLSLYK 280 (283)
T ss_pred HHHHHhcCCC-------CCCCCcCcHHHHHHHHHHhcCCcccCcCHH-HHHHHHHHHH
Confidence 2222222111 112334567899999999999999999999 7888888764
No 19
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-40 Score=357.64 Aligned_cols=262 Identities=29% Similarity=0.481 Sum_probs=207.2
Q ss_pred HHHHHHhcCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC-Ccc
Q 003481 463 ADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWS 539 (816)
Q Consensus 463 ~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~ 539 (816)
.+.....+.+.+...||+|.||+||+|.|.| .||||+++..... ..+.|++|+.+|++-+|-||+-++|||-+ ...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~A 463 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLA 463 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCcee
Confidence 3334444555667889999999999999987 6999999877654 34579999999999999999999999944 468
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
||..+|.|.+|+.+|+-.. ..|.....+.|+.|||+|+.|||..+ |||||||..||||.++++|||+|||++...
T Consensus 464 IiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999998765 46888999999999999999999987 999999999999999999999999999765
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCcccccc---CCCCcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCcccccc
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRT---GVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSIL 694 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~ 694 (816)
.... .........|...|||||+++. .+|++.+|||||||++|||+||..||.... .+..++-.|.+.
T Consensus 539 ~~w~----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~--- 611 (678)
T KOG0193|consen 539 TRWS----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLM--- 611 (678)
T ss_pred eeec----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccC---
Confidence 4331 1123355668899999998864 479999999999999999999999997222 222222223221
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
+.........+.++.+|+..||..++++||.+.+++...++.+
T Consensus 612 -pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 612 -PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred -ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 1111223346678999999999999999999995444444433
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=342.34 Aligned_cols=261 Identities=22% Similarity=0.293 Sum_probs=211.5
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccH-HHHHHHHHHHhcCCCCceeeEeccc--cCCccceee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQ-LEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYE 543 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~-~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E 543 (816)
.+.|.....||.|..++||+|+.. +..||||++........ ..+.+|+..|+.++||||++++..| .+.+++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 457899999999999999999885 89999999987765544 7789999999999999999999988 456899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
||.+||+.+++...-. ..+++..+..|+.+++.||.|||.+| .||||||+.||||+.+|.|||+|||.+..+....
T Consensus 105 fMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 9999999999976543 34889999999999999999999998 9999999999999999999999999887765543
Q ss_pred CcCCCccccCCCCCCCCCCCccccc--cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhcCccccccCC-CC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHR--TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDP-LA 698 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~~~~~~~d~-~~ 698 (816)
.... ......+||++|||||++. ...|+.|+||||||++.+||.+|..||......... ...+........ ..
T Consensus 181 -~R~~-~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~ 258 (516)
T KOG0582|consen 181 -DRQV-TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLD 258 (516)
T ss_pred -ceee-EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCC
Confidence 1111 1226779999999999853 347999999999999999999999999855543322 223332222110 11
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+.....+..+.+++..||+.||.+|||+.+.+.+.+
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~F 295 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAF 295 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHH
Confidence 1222345668999999999999999999998776665
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=355.56 Aligned_cols=247 Identities=28% Similarity=0.416 Sum_probs=206.0
Q ss_pred HHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccC----Cc-ccHHHHHHHHHHHhcCC-CCceeeEeccc--c
Q 003481 466 QTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH----NM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGAC--P 535 (816)
Q Consensus 466 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~----~~-~~~~~~~~E~~il~~l~-HpnIv~l~g~~--~ 535 (816)
....++|...+.||+|+||.|+.|... +..||+|++... .. .....+.+|+.++++++ ||||++++.++ .
T Consensus 13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 345678999999999999999999875 899999977664 11 23445678999999998 99999999998 4
Q ss_pred CCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-CCeeEeecc
Q 003481 536 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFG 614 (816)
Q Consensus 536 ~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkL~DFG 614 (816)
...++||||+.||+|.+++...+ ++.+.....++.|++.|+.|||+.+ |+||||||+||||+.+ +++||+|||
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred CeEEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccc
Confidence 46999999999999999998743 5888999999999999999999988 9999999999999999 999999999
Q ss_pred cceecc-CCCCcCCCccccCCCCCCCCCCCccccccCC-CC-cchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCc
Q 003481 615 ICRLVT-EDTLYLPSFHRSTAPKGSFPYADPEYHRTGV-LT-PKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGK 689 (816)
Q Consensus 615 la~~~~-~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s-~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~ 689 (816)
++.... .+. .....+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||...+.. ...+..+.
T Consensus 167 ~s~~~~~~~~-------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~ 239 (370)
T KOG0583|consen 167 LSAISPGEDG-------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGE 239 (370)
T ss_pred cccccCCCCC-------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCC
Confidence 999873 322 346778999999999999877 75 7999999999999999999999864432 22222222
Q ss_pred cccccCCCCCCCCHHH-HHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 690 LSSILDPLAGDWPTFV-ARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 690 ~~~~~d~~~~~~~~~~-~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
+ .+|... +..+..|+.+||..||..|+++.+.+.+.
T Consensus 240 ~---------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~ 276 (370)
T KOG0583|consen 240 F---------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHP 276 (370)
T ss_pred c---------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhCh
Confidence 2 344445 88999999999999999999999655433
No 22
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=355.15 Aligned_cols=233 Identities=28% Similarity=0.470 Sum_probs=197.5
Q ss_pred ceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccCC--ccceeeccCCCchhhh
Q 003481 476 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDR 553 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~--~~lV~E~~~~gsL~~~ 553 (816)
..||.|+.|.||+|++.+..||||+++.-. ..+++-|++|+||||+.|.|+|... +|||||||..|-|..+
T Consensus 130 eWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V 202 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV 202 (904)
T ss_pred hhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence 579999999999999999999999875322 2478889999999999999999664 7899999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccC
Q 003481 554 LFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 633 (816)
Q Consensus 554 l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 633 (816)
|.... +++-.....|..+||.|+.|||.++ |||||||.-||||..+..|||+|||.++...... ...
T Consensus 203 Lka~~---~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S-------TkM 269 (904)
T KOG4721|consen 203 LKAGR---PITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS-------TKM 269 (904)
T ss_pred HhccC---ccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhh-------hhh
Confidence 97654 5677888999999999999999998 9999999999999999999999999998876543 245
Q ss_pred CCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 003481 634 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLG 713 (816)
Q Consensus 634 ~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li 713 (816)
.++||..|||||++.+.+.+.|+|||||||||||||||..||...+.. ++.-|.-...+ ....|..+++.|.-|+
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss--AIIwGVGsNsL---~LpvPstcP~GfklL~ 344 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS--AIIWGVGSNSL---HLPVPSTCPDGFKLLL 344 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh--eeEEeccCCcc---cccCcccCchHHHHHH
Confidence 678999999999999999999999999999999999999999766552 22222111111 2234667778999999
Q ss_pred HHhhccCCCCCCCChHHHHH
Q 003481 714 LQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 714 ~~cl~~dP~~RPs~~e~l~~ 733 (816)
++||+..|..||++++++.+
T Consensus 345 Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 345 KQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred HHHHhcCCCCCccHHHHHHH
Confidence 99999999999999965544
No 23
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-40 Score=349.83 Aligned_cols=256 Identities=26% Similarity=0.341 Sum_probs=208.2
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHH-HHHHHHHHHhcCC-CCceeeEeccccC---Cccc
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQL-EFQQEVRVLSKLQ-HPHLVTLLGACPE---AWSL 540 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~-~~~~E~~il~~l~-HpnIv~l~g~~~~---~~~l 540 (816)
.-++|...++||.|.||.||+|+.. |..||||.++..-....+ --.+|+..|++|+ |||||+|..++.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 3467888999999999999999875 889999999765433222 2358999999998 9999999999843 4799
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
|||||+ .+|.+++..+. ..+++..+..|+.||++||+|+|.+| +.|||+||+|||+..+..+||+|||+|+.+.
T Consensus 88 VfE~Md-~NLYqLmK~R~--r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDRN--RLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eHHhhh-hhHHHHHhhcC--CcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccc
Confidence 999995 59999998774 68999999999999999999999998 9999999999999999999999999999887
Q ss_pred CCCCcCCCccccCCCCCCCCCCCcccc-ccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc----C-------
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYH-RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----G------- 688 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----~------- 688 (816)
... ..+..+.|.+|.|||++ +.+.|+.+.|+||+|||++|+.+-++.|.+.+++++.+.. |
T Consensus 162 Skp-------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 162 SKP-------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred cCC-------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence 654 34677899999999965 6678999999999999999999999999877766554321 1
Q ss_pred ----ccccccC---CC-----CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 689 ----KLSSILD---PL-----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 689 ----~~~~~~d---~~-----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
.+...+. |. ....-...+.++.+|+.+||.+||.+|||+.+.+.+.+=
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pff 294 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFF 294 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence 0111111 10 111112367789999999999999999999977766553
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-39 Score=347.16 Aligned_cols=254 Identities=26% Similarity=0.378 Sum_probs=203.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecccc----CCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~----~~~~lV 541 (816)
+.|..+.+||+|.||.||++++. |+.||+|++..+... ......+||.||++|+||||++|.+... ...|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 45677788999999999999985 889999999887643 3345679999999999999999999863 358999
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
+|||+. +|.-++.... -.|+..++..++.||+.||.|||..+ |+|||||.+|||||.+|.+||+|||+|+.+..
T Consensus 197 FeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred Eecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 999965 8888775543 35899999999999999999999988 99999999999999999999999999998765
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh----cCc-------
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----CGK------- 689 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~----~~~------- 689 (816)
.... ..+..+-|+.|.|||++.+. .|++++|+||.||||.||++|++.|....++.+.-. +|.
T Consensus 271 ~~~~-----~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 271 SGSA-----PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP 345 (560)
T ss_pred CCCc-----ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence 5421 35778899999999987664 799999999999999999999999987776654321 121
Q ss_pred ---cc--cccCCCCCCCCH-------HHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 690 ---LS--SILDPLAGDWPT-------FVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 690 ---~~--~~~d~~~~~~~~-------~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+. ..+.+. ..+.. ..+....+|+..+|..||.+|.|+.+.|...+
T Consensus 346 ~~kLP~~~~~kp~-~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~sey 402 (560)
T KOG0600|consen 346 VSKLPHATIFKPQ-QPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEY 402 (560)
T ss_pred cccCCcccccCCC-CcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcc
Confidence 11 011110 11111 23456789999999999999999997665543
No 25
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-39 Score=353.12 Aligned_cols=245 Identities=29% Similarity=0.444 Sum_probs=211.6
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
+-|..++.||.|+.|.|-+|++. |+.+|||++.+... .....+.+|+-+|+.+.|||+++||+++.+ ++|||+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 34778889999999999999885 99999999977632 223457899999999999999999999855 589999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|-|.++|..++ ++++.+..+++.||+.|+.|+|..+ |+||||||+|+|||.++++||+|||+|..-.++
T Consensus 92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999998876 5888999999999999999999998 999999999999999999999999999887666
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCC-CcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCccccccCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVL-TPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~ 699 (816)
.. -.+.+|.|.|.+||++.+.+| +.++||||+|||||.||||+.||+..+ .+...+..|.+
T Consensus 166 kl-------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f--------- 229 (786)
T KOG0588|consen 166 KL-------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF--------- 229 (786)
T ss_pred cc-------ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc---------
Confidence 53 356689999999999999988 479999999999999999999997332 23334455554
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+.|.+++.+..+|+.+|+..||..|.|+.+++.|.+-
T Consensus 230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence 3466788899999999999999999999988877764
No 26
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.5e-38 Score=342.22 Aligned_cols=241 Identities=25% Similarity=0.343 Sum_probs=195.3
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
.|...+.||+|+||.||++.+. |..||+|.+..... .....+.+|+.++.+++|+||++++++|. +..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3777889999999999999874 88999999865432 22345789999999999999999999874 35889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999988865432 35899999999999999999999987 9999999999999999999999999998764332
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~ 701 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ...+... +......+
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~ 224 (285)
T cd05631 157 -------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR-----VKEDQEEY 224 (285)
T ss_pred -------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH-----hhcccccC
Confidence 123456999999999999999999999999999999999999999743321 0111100 01111234
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
+...+..+.+|+.+||+.||.+||+.
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLGC 250 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcCC
Confidence 44566789999999999999999985
No 27
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-39 Score=340.98 Aligned_cols=247 Identities=26% Similarity=0.344 Sum_probs=207.2
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~~ 545 (816)
.|+....||+|.||.||+|.+. ++.||||++...... ..+.+++|+.+|.+++++||.++||.+ ...++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 4666678999999999999986 889999999876544 456789999999999999999999987 44588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
.||++.+.|.... .+.+..+.-|+.+++.||.|||..+ .+|||||+.||||..+|.+||+|||.+..+.....
T Consensus 94 ~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~- 166 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK- 166 (467)
T ss_pred cCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhh-
Confidence 9999999986543 3467778889999999999999988 99999999999999999999999999988876542
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
+....+||+.|||||++....|+.|+||||||++.+||.+|.+|+......+ .+.-+.....+.+....
T Consensus 167 -----rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr------vlflIpk~~PP~L~~~~ 235 (467)
T KOG0201|consen 167 -----RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR------VLFLIPKSAPPRLDGDF 235 (467)
T ss_pred -----ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce------EEEeccCCCCCcccccc
Confidence 3477899999999999998899999999999999999999999997554421 11111112233344467
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
++.+.+++..||+.||+.||++.+.|.+.+
T Consensus 236 S~~~kEFV~~CL~k~P~~RpsA~~LLKh~F 265 (467)
T KOG0201|consen 236 SPPFKEFVEACLDKNPEFRPSAKELLKHKF 265 (467)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhhHH
Confidence 788999999999999999999998776655
No 28
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.3e-39 Score=366.38 Aligned_cols=254 Identities=30% Similarity=0.503 Sum_probs=215.9
Q ss_pred CCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
+....+.||+|.||.||+|+.. ...||||.++..... .+.+|++|+++|..|+|||||+|+|+|.+ ..++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 3455567999999999999875 356999999887665 77899999999999999999999999954 4899
Q ss_pred eeeccCCCchhhhhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCee
Q 003481 541 VYEYLPNGSLQDRLFRKSN-----------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSK 609 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vk 609 (816)
|+|||..|+|.++|..... .++|+..+.+.|+.|||.|+.||-++. +|||||-..|+||.++..||
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEE
Confidence 9999999999999975431 234899999999999999999999998 99999999999999999999
Q ss_pred EeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCC--hHHHHHHhh
Q 003481 610 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGL--AGEVRRAVS 686 (816)
Q Consensus 610 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~--~~~~~~~~~ 686 (816)
|+|||+++.+-..+.+. ......-...|||||.+..++||++||||||||+|||+++ |+.||.. ..++...+.
T Consensus 644 IsDfGLsRdiYssDYYk----~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~ 719 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYK----VRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR 719 (774)
T ss_pred ecccccchhhhhhhhhc----ccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH
Confidence 99999999775544331 1224445678999999999999999999999999999999 9999863 446777788
Q ss_pred cCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 687 CGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 687 ~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
.|++. ..|...+..+..|+..||+.+|.+||++. ++-..|+....
T Consensus 720 ~g~lL--------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~-eI~~~L~~~~~ 764 (774)
T KOG1026|consen 720 AGQLL--------SCPENCPTEVYSLMLECWNENPKRRPSFK-EIHSRLQAWAQ 764 (774)
T ss_pred cCCcc--------cCCCCCCHHHHHHHHHHhhcCcccCCCHH-HHHHHHHHHHh
Confidence 88763 34666778999999999999999999999 78888887643
No 29
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=352.95 Aligned_cols=238 Identities=26% Similarity=0.383 Sum_probs=203.0
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccc--cCCcc
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGAC--PEAWS 539 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~g~~--~~~~~ 539 (816)
.-++|.....||+|.||+|+++.+. ++.+|||++++... .+.+....|.+|+... +||.++.|+.+| .++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3467999999999999999999886 67899999998865 3455677898888887 599999999999 45799
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
+||||+.||++..+... ..+++..+.-++..|+.||.|||+++ |||||||.+|||||.+|++||+|||+++..
T Consensus 446 fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccccc
Confidence 99999999996554432 35888999999999999999999998 999999999999999999999999999976
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCC
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPL 697 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~ 697 (816)
.... ..+.+.+|||.|||||++.+..|+.++|+|||||+|||||+|..||...++ +...+...
T Consensus 519 m~~g------~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d--------- 583 (694)
T KOG0694|consen 519 MGQG------DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND--------- 583 (694)
T ss_pred CCCC------CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC---------
Confidence 5322 145778999999999999999999999999999999999999999975554 32332221
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
..-||..++.+...++.++|..||++|-.+
T Consensus 584 ~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 124677889999999999999999999987
No 30
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.9e-38 Score=341.18 Aligned_cols=258 Identities=28% Similarity=0.411 Sum_probs=197.6
Q ss_pred cCCCccceeeeecceEEEEEEEc------------------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeE
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML------------------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTL 530 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~------------------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l 530 (816)
++|...++||+|+||.||++.+. +..||+|.+..... .....|.+|+.+|.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 56888899999999999999752 34699999876533 234578999999999999999999
Q ss_pred ecccc--CCccceeeccCCCchhhhhhhcC----------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceee
Q 003481 531 LGACP--EAWSLVYEYLPNGSLQDRLFRKS----------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 592 (816)
Q Consensus 531 ~g~~~--~~~~lV~E~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivH 592 (816)
+++|. +..++||||+++|+|.+++.... ....++|..++.|+.||+.||.|||+.+ |+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 99984 35899999999999999886432 1235789999999999999999999988 999
Q ss_pred CCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh--
Q 003481 593 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-- 670 (816)
Q Consensus 593 rDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-- 670 (816)
|||||+|||++.++.+||+|||+++........ .......++..|+|||++..+.++.++|||||||++|+|++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYY----RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCcee----EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999999999999999999876443211 12234456889999999988899999999999999999987
Q ss_pred CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 671 GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 671 G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
|..||..... ....... .+...........+...+..+.+|+.+||+.+|.+||++. ++...|+
T Consensus 238 ~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~-~i~~~l~ 303 (304)
T cd05096 238 KEQPYGELTDEQVIENAGE-FFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFS-DIHAFLT 303 (304)
T ss_pred CCCCCCcCCHHHHHHHHHH-HhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHH-HHHHHHh
Confidence 5677764322 1111100 0000000000111223456899999999999999999998 5666654
No 31
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3e-38 Score=314.18 Aligned_cols=253 Identities=26% Similarity=0.360 Sum_probs=202.6
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~--~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
.+|...++||+|.||.||+|++. |+.||||+++.....+ .....+|++.|+.++|+||+.|+++|.. ...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 35777889999999999999986 8999999997764432 2356799999999999999999999954 5789999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
||+ .+|+..+.... ..++-.++..++.++++||+|||.+. |+||||||.|+|++.+|.+||+|||+|+.+....
T Consensus 82 fm~-tdLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ecc-ccHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 995 59999997665 46888999999999999999999988 9999999999999999999999999999987544
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc----C--------cc
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----G--------KL 690 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----~--------~~ 690 (816)
. ..+..+-|..|.|||.+.+ ..|+..+|+||.|||+.||+-|.+-|.+..++.+.... | .+
T Consensus 156 ~------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 156 R------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred c------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccc
Confidence 2 2233478999999997655 57999999999999999999999988766665443211 1 01
Q ss_pred ccccC---------CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 691 SSILD---------PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 691 ~~~~d---------~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
..+.| +.....-...+....+|+..|+.+||.+|+++.|.+.+.
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence 11111 111111223556779999999999999999999766443
No 32
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4e-38 Score=339.88 Aligned_cols=233 Identities=26% Similarity=0.349 Sum_probs=195.6
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||+|+||.||+|... ++.||+|++..... .....+.+|+.++.+++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888899999999999999886 88999999865432 234468899999999999999999998854 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999987643 5888999999999999999999988 999999999999999999999999998865432
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~ 700 (816)
. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+. ..
T Consensus 155 ~---------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~---------~~ 216 (291)
T cd05612 155 T---------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK---------LE 216 (291)
T ss_pred c---------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------cC
Confidence 1 234699999999999988999999999999999999999999975432 222222222 12
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCC
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs 726 (816)
++...+..+.+|+.+||+.||.+||+
T Consensus 217 ~~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 217 FPRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred CCccCCHHHHHHHHHHcCCCHHHccC
Confidence 34445678999999999999999996
No 33
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-38 Score=347.82 Aligned_cols=234 Identities=24% Similarity=0.367 Sum_probs=196.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~ 542 (816)
++|.+.+.||+|+||.||+|++. ++.||+|++..... .....+.+|+.++.+++||||+++++++. +..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888899999999999999885 78999999875432 23456889999999999999999999884 4588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999987643 5788999999999999999999988 999999999999999999999999999876432
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~ 700 (816)
. ....||+.|+|||++.+..++.++|||||||++|+|++|..||..... ....+..+.+ .
T Consensus 172 ~---------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------~ 233 (329)
T PTZ00263 172 T---------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL---------K 233 (329)
T ss_pred c---------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc---------C
Confidence 2 234699999999999999999999999999999999999999965433 2222333221 2
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
+|...+..+.+|+.+||+.||.+||+.
T Consensus 234 ~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 234 FPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 233355678999999999999999984
No 34
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-38 Score=332.46 Aligned_cols=255 Identities=24% Similarity=0.309 Sum_probs=199.4
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--------------ccHHHHHHHHHHHhcCCCCceeeE
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--------------QGQLEFQQEVRVLSKLQHPHLVTL 530 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--------------~~~~~~~~E~~il~~l~HpnIv~l 530 (816)
..-|.|.+...||+|.||.|-+|+.. ++.||||++.+... ...+.+.+|+.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34478999999999999999999886 88999999965422 123468899999999999999999
Q ss_pred ecccc----CCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC
Q 003481 531 LGACP----EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL 606 (816)
Q Consensus 531 ~g~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~ 606 (816)
+.+.. +..|||+|||..|.+...- .....+++.++++++.++..||.|||.++ ||||||||+|+||+.+|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence 99874 4589999999988775532 22223899999999999999999999988 99999999999999999
Q ss_pred CeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCC----CCcchhHhHHHHHHHHHHhCCCCCCChHHHH
Q 003481 607 SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV----LTPKSDSYSFGLIILQLLTGRLPVGLAGEVR 682 (816)
Q Consensus 607 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~ 682 (816)
++||+|||.+...+.+..... .......+|||.|+|||...++. .+.+.||||+||+||.|+.|+.||.......
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~-d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~ 326 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGS-DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE 326 (576)
T ss_pred cEEeeccceeeecccCCcccc-HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH
Confidence 999999999988754422111 11223478999999999887632 3578999999999999999999996544332
Q ss_pred H--HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 683 R--AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 683 ~--~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
. .+.. +|..-.-.+++.+.+.+||+++|.+||..|.++.++.++..
T Consensus 327 l~~KIvn-------~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 327 LFDKIVN-------DPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred HHHHHhc-------CcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 1 1211 12211112246789999999999999999999985544443
No 35
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.9e-38 Score=346.24 Aligned_cols=230 Identities=26% Similarity=0.319 Sum_probs=189.6
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNG 548 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~g 548 (816)
+.||+|+||.||++... |+.||||++..... .....+.+|+.++.+++||||++++++|.. ..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999875 88999999975432 233467889999999999999999998843 488999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 628 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 628 (816)
+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~----- 149 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG----- 149 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-----
Confidence 9999887543 5889999999999999999999988 9999999999999999999999999987543221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHHHH
Q 003481 629 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ...+..+. ..+|...+
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~---------~~~p~~~~ 219 (323)
T cd05571 150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---------IRFPRTLS 219 (323)
T ss_pred -CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---------CCCCCCCC
Confidence 1123456999999999999999999999999999999999999999654321 12222111 13344567
Q ss_pred HHHHHHHHHhhccCCCCCCC
Q 003481 707 RRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs 726 (816)
..+.+|+.+||+.||.+||+
T Consensus 220 ~~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05571 220 PEAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred HHHHHHHHHHccCCHHHcCC
Confidence 78999999999999999994
No 36
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-37 Score=340.71 Aligned_cols=254 Identities=23% Similarity=0.340 Sum_probs=200.6
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
.++|...+.||+|+||.||++++. +..||+|.+..... .....+.+|+.+|.+++||||+++++++. +..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367899999999999999999986 78899999876432 23456899999999999999999999884 35899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 84 HMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 999999999986643 5888999999999999999999853 39999999999999999999999999987664322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCcc-------cc--
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKL-------SS-- 692 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~-------~~-- 692 (816)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||..... ....+..... ..
T Consensus 159 --------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (331)
T cd06649 159 --------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSIS 230 (331)
T ss_pred --------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccC
Confidence 2345699999999999998999999999999999999999999964332 1111110000 00
Q ss_pred -----------------------------ccCCCCCCC-CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 693 -----------------------------ILDPLAGDW-PTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 693 -----------------------------~~d~~~~~~-~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+........ ...++..+.+|+.+||+.||++||++.+.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 000000000 1135678999999999999999999997665544
No 37
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-38 Score=327.41 Aligned_cols=244 Identities=25% Similarity=0.393 Sum_probs=210.3
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHH---HHHHHHHHHhcCCCCceeeEeccccC--Cccce
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQL---EFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~---~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV 541 (816)
..+|.+.+.||+|.||.|-++... |+.||||.++++...+.. .+.+|++||+.|+||||+.+|.+|++ ...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 457888899999999999999774 999999999888665544 57899999999999999999999965 58899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||..+|.|+|++.... .|++.+...++.||.+|+.|+|.++ ++|||||.+|||||.|+++||+|||++..+..
T Consensus 132 MEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999998775 5899999999999999999999988 99999999999999999999999999998876
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCC-CcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVL-TPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~ 698 (816)
+.. ....+|+|.|.+||++.+.+| ++.+|-|||||+||.|+.|..||++.+. ....+..|.+.+.-
T Consensus 206 ~kf-------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~---- 274 (668)
T KOG0611|consen 206 KKF-------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE---- 274 (668)
T ss_pred ccH-------HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC----
Confidence 553 367789999999999999988 5899999999999999999999986553 44556666655432
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+....-||.+||-.||.+|-|+.++.-+..
T Consensus 275 ------~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 275 ------TPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred ------CCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 2235677999999999999999986554443
No 38
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.1e-38 Score=344.61 Aligned_cols=247 Identities=24% Similarity=0.283 Sum_probs=200.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|.+.+.||+|+||.||+|++. +..||||++..... .....+.+|+.++..++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46889999999999999999985 78999999975432 234568899999999999999999998844 488999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999996543 5888999999999999999999988 99999999999999999999999999976543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCcccccc-CCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSIL-DPLAG 699 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~-d~~~~ 699 (816)
......||+.|+|||++.+..++.++|||||||++|||++|..||...... ...+... ...+ .+...
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~ 223 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW--KETLQRPVYD 223 (333)
T ss_pred --------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc--cccccCCCCC
Confidence 124457999999999999989999999999999999999999999754332 1222111 1111 11111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+.....+..+.+|+.+||..+|.+||++.+.+.+
T Consensus 224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 224 DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1112356789999999999999999999865544
No 39
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.9e-37 Score=346.76 Aligned_cols=253 Identities=29% Similarity=0.420 Sum_probs=200.3
Q ss_pred hcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--C
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--A 537 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~ 537 (816)
.++|.+.+.||+|+||.||+|++. +..||||++..... .....+.+|+.+|..+ +||||++++|+|.+ .
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 457888999999999999999742 45899999875432 3345688999999999 89999999999844 5
Q ss_pred ccceeeccCCCchhhhhhhcCC----------------------------------------------------------
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN---------------------------------------------------------- 559 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~---------------------------------------------------------- 559 (816)
.++||||+++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 8899999999999998864321
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 560 --------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 560 --------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
...++|..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 125789999999999999999999987 999999999999999999999999999876543211
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH---HHHHHhhcCccccccCCCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---EVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~---~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.... .....+..+... ..
T Consensus 271 ----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~--------~~ 338 (375)
T cd05104 271 ----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM--------LS 338 (375)
T ss_pred ----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC--------CC
Confidence 11223445678999999999999999999999999999998 899986432 222333322211 11
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
+...+..+.+|+.+||+.||.+||++. .+++.|+.
T Consensus 339 ~~~~~~~l~~li~~cl~~dP~~RPs~~-eil~~l~~ 373 (375)
T cd05104 339 PECAPSEMYDIMKSCWDADPLKRPTFK-QIVQLIEQ 373 (375)
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHH-HHHHHHHh
Confidence 222356899999999999999999999 66666764
No 40
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-38 Score=357.99 Aligned_cols=261 Identities=23% Similarity=0.328 Sum_probs=209.5
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC-CCceeeEeccc------cC-
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLGAC------PE- 536 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~------~~- 536 (816)
....++++.+.|.+|||+.||++.+. |..||+|++...+......+.+|+++|++|+ |||||.+++.. ..
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 34567888899999999999999986 4899999998887778888999999999996 99999999943 11
Q ss_pred --CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 537 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 537 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
+.+|.||||.||.|-|+|..+.... |++.++++|+.++|+|+.+||... .||||||||-+||||+.+|+.||||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccc
Confidence 2679999999999999998765544 999999999999999999999998 689999999999999999999999999
Q ss_pred cceeccCCCCc---CCCccccCCCCCCCCCCCcccc---ccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcC
Q 003481 615 ICRLVTEDTLY---LPSFHRSTAPKGSFPYADPEYH---RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCG 688 (816)
Q Consensus 615 la~~~~~~~~~---~~~~~~~~~~~gt~~Y~aPE~~---~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~ 688 (816)
.|......... .......-...-|+.|.|||.+ .+.+.+.|+|||+|||+||-|+....||+..+. .+|..|
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--laIlng 269 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--LAILNG 269 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--eeEEec
Confidence 98754322200 0000011123478999999965 677899999999999999999999999975543 233333
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 689 KLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 689 ~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
++.- +.+ +.++..|.+||..||+.||.+||++.+.+...++-.
T Consensus 270 ~Y~~------P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 270 NYSF------PPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred cccC------CCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 3321 122 358899999999999999999999996555555433
No 41
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-38 Score=311.91 Aligned_cols=244 Identities=24% Similarity=0.359 Sum_probs=206.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|.+++.||+|-||.||.|+.. +..||+|++.+... ....++.+|++|-+.|+||||+++||+|.+ ..||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 45788899999999999999886 67899999977643 334578999999999999999999999965 489999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||.++|+|...|..... ..++......++.|+|.||.|+|..+ ||||||||+|+|++..+.+||+|||.+...+.+
T Consensus 102 Eya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~ 177 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSN 177 (281)
T ss_pred EecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence 99999999999975432 45778888999999999999999987 999999999999999999999999998765422
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~ 700 (816)
.....+||..|.+||...+..++.++|+|++|++.||++.|.+||..... ....+..- ...
T Consensus 178 --------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~---------~~~ 240 (281)
T KOG0580|consen 178 --------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV---------DLK 240 (281)
T ss_pred --------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc---------ccc
Confidence 45677899999999999999999999999999999999999999974432 22222221 123
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
+|..++....+||.+|+..+|.+|....+.+.+.
T Consensus 241 ~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 241 FPSTISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred CCcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 4567888999999999999999999998665443
No 42
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.9e-37 Score=333.26 Aligned_cols=251 Identities=23% Similarity=0.278 Sum_probs=195.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
++|.+.+.||+|+||.||++++. +..||+|++..... .....+.+|+.++..++||||++++++|.+ ..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47889999999999999999986 78899999875432 234568899999999999999999999843 5889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++++|..+.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 99988776554322 35889999999999999999999987 9999999999999999999999999998764332
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh----cCc----------
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----CGK---------- 689 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~----~~~---------- 689 (816)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|++||........... .+.
T Consensus 155 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 155 NA-----NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred cc-----cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 11 12345689999999999888899999999999999999999999975432211110 000
Q ss_pred ----cccccCCCC-------CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 690 ----LSSILDPLA-------GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 690 ----~~~~~d~~~-------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
......+.. ..+....+..+.+|+.+||+.||.+||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l 282 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 000000000 011123566799999999999999999998544
No 43
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.6e-37 Score=327.76 Aligned_cols=250 Identities=25% Similarity=0.363 Sum_probs=200.5
Q ss_pred cCCCccceeeeecceEEEEEEEc-----CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV 541 (816)
++|.+.+.||+|+||.||+|.+. +..||+|.+..... .....|.+|+.++.+++||||++++|++. +..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888899999999999999763 56899999876533 23456889999999999999999999984 458999
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++|+|.+++.... ..+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||.+.....
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 85 TEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999999987643 36899999999999999999999987 99999999999999999999999998765432
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~ 698 (816)
.... ......++..|+|||.+.+..++.++|||||||++|||++ |..||..... ....+..+..
T Consensus 160 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-------- 226 (266)
T cd05064 160 EAIY-----TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR-------- 226 (266)
T ss_pred cchh-----cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC--------
Confidence 2111 1123345678999999999999999999999999999775 9999964332 2222322211
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
...+...+..+.+++.+||+.+|.+||++. .+.+.|..+
T Consensus 227 ~~~~~~~~~~~~~li~~c~~~~p~~RP~~~-~i~~~l~~~ 265 (266)
T cd05064 227 LPAPRNCPNLLHQLMLDCWQKERGERPRFS-QIHSILSKM 265 (266)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCCCHH-HHHHHHHhh
Confidence 112334556899999999999999999998 677777653
No 44
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-37 Score=357.11 Aligned_cols=249 Identities=21% Similarity=0.255 Sum_probs=203.0
Q ss_pred CCCccceeeeecceEEEEEEEc---CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~---g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
.|...+.||+|+||.||++... +..||+|.+..........+.+|+.+|..++|||||+++++|. +..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3888999999999999999764 5679999876555444556888999999999999999999984 4589999999
Q ss_pred CCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 546 PNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 546 ~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
++|+|.++|... ....++++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988643 22346889999999999999999999987 99999999999999999999999999987654321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~ 702 (816)
. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... +...+..+... .++
T Consensus 225 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--------~~~ 292 (478)
T PTZ00267 225 L----DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--------PFP 292 (478)
T ss_pred c----ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCC
Confidence 1 123455799999999999999999999999999999999999999975433 22222222221 223
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
..++..+.+|+.+||..+|.+||++.+.+.+.
T Consensus 293 ~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~ 324 (478)
T PTZ00267 293 CPVSSGMKALLDPLLSKNPALRPTTQQLLHTE 324 (478)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHhCH
Confidence 34567899999999999999999999766543
No 45
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1e-37 Score=342.03 Aligned_cols=230 Identities=26% Similarity=0.326 Sum_probs=188.6
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNG 548 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~g 548 (816)
+.||+|+||.||++... |..||+|++..... .....+.+|+.++..++||||++++++|. +..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999875 88999999975422 23345778999999999999999999884 3588999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 628 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 628 (816)
+|..++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~---- 150 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---- 150 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCCC----
Confidence 9998886543 5889999999999999999999988 99999999999999999999999999875432211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHHHH
Q 003481 629 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. ...+..+. ..+|...+
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~---------~~~p~~~~ 219 (323)
T cd05595 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---------IRFPRTLS 219 (323)
T ss_pred --ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------CCCCCCCC
Confidence 123456999999999999999999999999999999999999999644322 12221111 12344566
Q ss_pred HHHHHHHHHhhccCCCCCCC
Q 003481 707 RRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs 726 (816)
..+.+|+.+||+.||.+||+
T Consensus 220 ~~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05595 220 PEAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred HHHHHHHHHHccCCHHHhCC
Confidence 78999999999999999983
No 46
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.8e-37 Score=338.26 Aligned_cols=230 Identities=25% Similarity=0.330 Sum_probs=189.9
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCC---cccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCch
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 550 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL 550 (816)
||+|+||.||++.+. +..||+|++.... ......+.+|+.++.+++||||++++++|.+ ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999885 7889999986532 2334567889999999999999999998843 58999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcc
Q 003481 551 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 630 (816)
Q Consensus 551 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 630 (816)
.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------ 148 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD------ 148 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCCC------
Confidence 99987643 5889999999999999999999988 99999999999999999999999999876432221
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003481 631 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 708 (816)
Q Consensus 631 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 708 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+ ...++...+..
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 219 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE---------PLRFPDGFDRD 219 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC---------CCCCCCcCCHH
Confidence 22445799999999999999999999999999999999999999964332 11222111 11234456678
Q ss_pred HHHHHHHhhccCCCCCCCCh
Q 003481 709 LVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 709 l~~Li~~cl~~dP~~RPs~~ 728 (816)
+.+|+.+||..||.+||++.
T Consensus 220 ~~~li~~~L~~dp~~R~~~~ 239 (312)
T cd05585 220 AKDLLIGLLSRDPTRRLGYN 239 (312)
T ss_pred HHHHHHHHcCCCHHHcCCCC
Confidence 99999999999999999764
No 47
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.2e-37 Score=335.21 Aligned_cols=252 Identities=25% Similarity=0.430 Sum_probs=200.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--Ce----EEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc-CCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GR----TVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~----~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~lV 541 (816)
.+|+..+.||+|+||.||+|.+. +. .||+|++..... .....|.+|+.+++.++||||++++|+|. +..++|
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v 86 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 86 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence 46888999999999999999873 33 489999875432 34567889999999999999999999984 457899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
++|+++|+|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 87 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999987643 35889999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~ 698 (816)
.... .......++..|+|||++.+..++.++|||||||++|||++ |..||..... .......+...
T Consensus 162 ~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------- 230 (316)
T cd05108 162 DEKE----YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL------- 230 (316)
T ss_pred CCcc----eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCC-------
Confidence 3321 11122345678999999999999999999999999999998 9999965332 22222222111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
..+...+..+.+++.+||..+|.+||++. .++..|..+.
T Consensus 231 -~~~~~~~~~~~~li~~cl~~~p~~Rps~~-~l~~~l~~~~ 269 (316)
T cd05108 231 -PQPPICTIDVYMIMVKCWMIDADSRPKFR-ELIIEFSKMA 269 (316)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHH-HHHHHHHHHH
Confidence 11223445789999999999999999999 5556666654
No 48
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.3e-37 Score=341.83 Aligned_cols=229 Identities=27% Similarity=0.323 Sum_probs=188.7
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNG 548 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~g 548 (816)
+.||+|+||.||++... +..||+|++..... .....+.+|+.++..++||||+++++++. +..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999875 78999999975432 23456789999999999999999999884 3588999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 628 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 628 (816)
+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~---- 150 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA---- 150 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCccc----
Confidence 9998886543 5889999999999999999999988 99999999999999999999999999875432211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHHHH
Q 003481 629 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. ...+..+ ...+|...+
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~---------~~~~p~~~~ 219 (328)
T cd05593 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME---------DIKFPRTLS 219 (328)
T ss_pred --ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC---------CccCCCCCC
Confidence 123457999999999999889999999999999999999999999654332 1111111 112344566
Q ss_pred HHHHHHHHHhhccCCCCCC
Q 003481 707 RRLVDLGLQCCELYGRERP 725 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RP 725 (816)
..+.+|+.+||..||.+||
T Consensus 220 ~~~~~li~~~L~~dP~~R~ 238 (328)
T cd05593 220 ADAKSLLSGLLIKDPNKRL 238 (328)
T ss_pred HHHHHHHHHHcCCCHHHcC
Confidence 7899999999999999998
No 49
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.9e-37 Score=345.20 Aligned_cols=254 Identities=28% Similarity=0.451 Sum_probs=201.2
Q ss_pred hcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--C
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--A 537 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~ 537 (816)
.++|...+.||+|+||.||+|++. +..||+|++..... .....+.+|+.+++.+ +||||++++|+|.+ .
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 357888999999999999999753 24799999975433 2345688999999999 89999999999854 4
Q ss_pred ccceeeccCCCchhhhhhhcCC----------------------------------------------------------
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN---------------------------------------------------------- 559 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~---------------------------------------------------------- 559 (816)
.++||||+++|+|.+++.....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 8899999999999998854210
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcc
Q 003481 560 ---------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 630 (816)
Q Consensus 560 ---------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 630 (816)
..++++..+++|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........ .
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~----~ 269 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY----V 269 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcce----e
Confidence 125788999999999999999999987 999999999999999999999999999876443211 1
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH---HHHHhhcCccccccCCCCCCCCHHHH
Q 003481 631 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE---VRRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 631 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
......+++.|+|||++....++.++|||||||++|+|++ |+.||..... ....+..+. . ...+...+
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~-----~---~~~~~~~~ 341 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY-----Q---MSRPDFAP 341 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc-----C---ccCCCCCC
Confidence 1223346678999999988899999999999999999997 9999964332 112221111 1 11222345
Q ss_pred HHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 707 RRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
..+.+++.+||+.||.+||++. .+++.|+.+
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~-~l~~~l~~~ 372 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFS-QISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHH-HHHHHHHHH
Confidence 7899999999999999999999 788888765
No 50
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-38 Score=308.07 Aligned_cols=265 Identities=22% Similarity=0.292 Sum_probs=208.8
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-------CC
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-------EA 537 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-------~~ 537 (816)
...++|++.+.||+|||+-||+++.. +..+|+|++......+.+...+|++..++++|||++++++++- +.
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 34578999999999999999999864 7889999998888788888999999999999999999999871 23
Q ss_pred ccceeeccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 538 WSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
.||+++|...|+|.+.+.... ....+++.+++.|+.+|++||.+||... .|++||||||.|||+.+.+.++|.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCc
Confidence 799999999999999987654 3347999999999999999999999988 48999999999999999999999999998
Q ss_pred eeccCCCC---cCCCccccCCCCCCCCCCCccccc---cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCcc
Q 003481 617 RLVTEDTL---YLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKL 690 (816)
Q Consensus 617 ~~~~~~~~---~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~ 690 (816)
....-... ..........-..|..|.|||.+. +...+.++|||||||+||.|+.|..||...-. ..|.+
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-----~GgSl 251 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-----QGGSL 251 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-----cCCeE
Confidence 76542111 001112233456889999999885 44678899999999999999999999962211 22222
Q ss_pred ccccCCCCCCCC--HHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 691 SSILDPLAGDWP--TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 691 ~~~~d~~~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.-.+....-.+| ..+++.+.+||.+|++.||.+||++. +|+..++.+
T Consensus 252 aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~-~ll~~~d~L 300 (302)
T KOG2345|consen 252 ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIP-ELLSKLDDL 300 (302)
T ss_pred EEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHH-HHHHHHHhh
Confidence 211111111111 22788999999999999999999999 555555543
No 51
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.9e-38 Score=340.95 Aligned_cols=248 Identities=21% Similarity=0.286 Sum_probs=210.8
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC--C-cccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE--A-WSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~--~~~~~~E~~il~~l~HpnIv~l~g~~~~--~-~~lV~ 542 (816)
++|...+++|+|+||.++..+.. ++.|++|.+....... .....+|+.++++++|||||.+++.|.+ . .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 47888899999999999988775 7889999997765433 3357899999999999999999999844 3 78999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
+||+||+|.+.|.+.. ...++++.++.|+.|++.|+.|||+.. |+|||||+.|||++.++.|||+|||+|+.+...
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998776 356899999999999999999999877 999999999999999999999999999998876
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~ 700 (816)
.. .....+||+.||.||.+.+.+|+.|+|||||||++|||++-+++|...+.. ...+..+. +. .
T Consensus 160 ~~------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~----~~----P 225 (426)
T KOG0589|consen 160 DS------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL----YS----P 225 (426)
T ss_pred hh------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc----CC----C
Confidence 52 245678999999999999999999999999999999999999999755432 22222222 22 3
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.|..++..+..|+..|+..+|..||++.+.|.+.+
T Consensus 226 lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~ 260 (426)
T KOG0589|consen 226 LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPH 260 (426)
T ss_pred CCccccHHHHHHHHHHhhcCCccCCCHHHHhhChh
Confidence 45667789999999999999999999997776644
No 52
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2e-37 Score=342.03 Aligned_cols=232 Identities=25% Similarity=0.299 Sum_probs=193.5
Q ss_pred cCCCccceeeeecceEEEEEEEc---CeEEEEEEeccCC---cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~---g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV 541 (816)
++|...+.||+|+||.||+|.+. +..||+|++.... ......+.+|+.++..++||||+++++++.+ ..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 46888899999999999999864 3579999986542 2234568899999999999999999999854 47899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999987653 5889999999999999999999988 99999999999999999999999999987643
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~ 699 (816)
. .....||+.|+|||++.+..++.++|||||||++|||++|..||...... ...+..+..
T Consensus 184 ~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--------- 245 (340)
T PTZ00426 184 R---------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII--------- 245 (340)
T ss_pred C---------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---------
Confidence 2 13456999999999999888999999999999999999999999755432 222222221
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCC
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERP 725 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RP 725 (816)
.+|...+..+.+++.+||+.||.+|+
T Consensus 246 ~~p~~~~~~~~~li~~~l~~dp~~R~ 271 (340)
T PTZ00426 246 YFPKFLDNNCKHLMKKLLSHDLTKRY 271 (340)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHcC
Confidence 23444566789999999999999996
No 53
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=7.7e-37 Score=327.74 Aligned_cols=251 Identities=33% Similarity=0.520 Sum_probs=202.3
Q ss_pred CCCccceeeeecceEEEEEEEcC-------eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEMLG-------RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~g-------~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
+|.+.+.||+|+||.||+|...+ ..||+|.+..... .....|.+|+.++.+++||||+++++++.+ ..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 57778899999999999998752 5699999875433 234568999999999999999999999854 4789
Q ss_pred eeeccCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCC
Q 003481 541 VYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 607 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~ 607 (816)
+|||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCc
Confidence 9999999999999976422 145889999999999999999999988 999999999999999999
Q ss_pred eeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHH
Q 003481 608 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRA 684 (816)
Q Consensus 608 vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~ 684 (816)
+||+|||++......... .......+++.|+|||++.++.++.++|||||||++|||++ |..||.... .+...
T Consensus 163 ~~L~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 163 VKISDFGLSRDIYSADYY----RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred EEECCCcceeeccccccc----cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999865433211 12234457889999999988899999999999999999998 999986432 23333
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 685 VSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 685 ~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
+..+... ..+..++..+.+|+.+||+.||.+||++. ++...|+.
T Consensus 239 i~~~~~~--------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~-~i~~~l~~ 282 (283)
T cd05048 239 IRSRQLL--------PCPEDCPARVYALMIECWNEIPARRPRFK-DIHTRLRS 282 (283)
T ss_pred HHcCCcC--------CCcccCCHHHHHHHHHHccCChhhCcCHH-HHHHHHhc
Confidence 3333221 23445667899999999999999999999 66666653
No 54
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.5e-37 Score=330.23 Aligned_cols=250 Identities=26% Similarity=0.370 Sum_probs=192.1
Q ss_pred cCCCccceeeeecceEEEEEEEc---CeEEEEEEeccCCcc--cHHHHHHHHHHHhcC---CCCceeeEecccc------
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKL---QHPHLVTLLGACP------ 535 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~---g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l---~HpnIv~l~g~~~------ 535 (816)
++|.+.+.||+|+||.||+|++. +..||+|++...... ....+.+|+.++..+ +||||++++++|.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999873 678999998654322 233566777777665 6999999999873
Q ss_pred -CCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 536 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 536 -~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
...++||||++ ++|.+++..... ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence 23789999996 689888865432 35899999999999999999999988 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhcC----
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCG---- 688 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~---- 688 (816)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|++||......... +...
T Consensus 156 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~ 228 (290)
T cd07862 156 LARIYSFQM-------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 228 (290)
T ss_pred ceEeccCCc-------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 998764332 234556899999999998889999999999999999999999999754332111 1100
Q ss_pred ---ccc-------cccCCCCC----CCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 689 ---KLS-------SILDPLAG----DWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 689 ---~~~-------~~~d~~~~----~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.+. ..+.+... .+....+..+.+|+.+||+.||++||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred ChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 000 00000000 01123456788999999999999999999655
No 55
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.5e-37 Score=336.61 Aligned_cols=254 Identities=23% Similarity=0.318 Sum_probs=193.6
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------Ccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------AWS 539 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------~~~ 539 (816)
+|.+.+.||+|+||.||+|++. +..||||++.... ......+.+|+.++++++||||+++++++.. ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778899999999999999875 7899999986432 2334568899999999999999999998721 368
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
+||||+. ++|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 68988886543 5899999999999999999999988 999999999999999999999999999865
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH--------------
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR-------------- 683 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-------------- 683 (816)
...... ........||+.|+|||++.+ ..++.++|||||||++|+|+||++||........
T Consensus 154 ~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 154 FNDTPT---AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred ccccCc---cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 432211 011244579999999999865 6789999999999999999999999964332111
Q ss_pred ---HhhcCcccccc----CCCCCCC---CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 684 ---AVSCGKLSSIL----DPLAGDW---PTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 684 ---~~~~~~~~~~~----d~~~~~~---~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.+........+ ......+ ....+..+.+|+.+||+.||.+||++.+.+.+.
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 00000000000 0000000 012345788999999999999999999766544
No 56
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-36 Score=322.30 Aligned_cols=249 Identities=29% Similarity=0.453 Sum_probs=201.8
Q ss_pred cCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 546 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~ 546 (816)
++|...++||+|+||.||+|... +..||+|.+..... ....+.+|+.++..++||||+++++++. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 46888899999999999999876 67799998865432 3567899999999999999999998874 34789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.........
T Consensus 85 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05072 85 KGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT- 159 (261)
T ss_pred CCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCcee-
Confidence 999999987543 245889999999999999999999987 999999999999999999999999999876543211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcCccccccCCCCCCCCH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......++..|+|||++..+.++.++|||||||++|+|+| |..||.... .....+..+.. .+. +.
T Consensus 160 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~----~~~----~~ 227 (261)
T cd05072 160 ----AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR----MPR----ME 227 (261)
T ss_pred ----ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC----CCC----CC
Confidence 1223446778999999988899999999999999999998 999996432 22222222211 111 12
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
..+..+.+++.+||..+|++||++. ++...|+.
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 260 (261)
T cd05072 228 NCPDELYDIMKTCWKEKAEERPTFD-YLQSVLDD 260 (261)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHH-HHHHHHhc
Confidence 2456789999999999999999998 78888875
No 57
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1e-36 Score=330.82 Aligned_cols=253 Identities=21% Similarity=0.339 Sum_probs=193.3
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
.++|.+.+.||.|+||.||+|... +..||||++...... ....+.+|+.+++.++||||+++++++. +..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999885 789999998754332 2345778999999999999999999984 35889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+. ++|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 995 57777776543 35888999999999999999999988 9999999999999999999999999987653222
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh-----cCcc-----cc
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS-----CGKL-----SS 692 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~-----~~~~-----~~ 692 (816)
. ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.........+. .+.. ..
T Consensus 158 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 158 H------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPG 231 (303)
T ss_pred c------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccc
Confidence 1 1234568999999998765 4588999999999999999999999975433211110 0000 00
Q ss_pred -----ccCCC-CC-CCCH---------HHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 693 -----ILDPL-AG-DWPT---------FVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 693 -----~~d~~-~~-~~~~---------~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
...+. .. ..+. ..+..+.+|+.+||+.||.+|||+.+.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000 00 0000 123568899999999999999999865543
No 58
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.2e-37 Score=329.13 Aligned_cols=250 Identities=24% Similarity=0.313 Sum_probs=193.1
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
++|...+.||.|+||.||+|... +..||+|++..... .....+.+|+.++++++||||+++++++.. ..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999875 78999999865432 234467899999999999999999998844 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++ +|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 975 8988886543 35788999999999999999999987 99999999999999999999999999976543221
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--h-h-cC-----------
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--V-S-CG----------- 688 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~-~-~~----------- 688 (816)
......|++.|+|||++.+ ..++.++|||||||++|+|+||++||......... + . .+
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred ------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence 1234568999999998865 56899999999999999999999999643321110 0 0 00
Q ss_pred ---ccccccCCCCC-----CCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 689 ---KLSSILDPLAG-----DWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 689 ---~~~~~~d~~~~-----~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.+.....+... ......+..+.+|+.+||+.||.+|||+.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 00001101000 00112356789999999999999999998655
No 59
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-36 Score=334.26 Aligned_cols=255 Identities=24% Similarity=0.370 Sum_probs=199.9
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
.++|...++||.|+||.||++.+. +..||+|.+..... .....+.+|+.++.+++||||++++++|. +..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 368999999999999999999886 77899998875432 23456889999999999999999999984 35899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++|+|.+++.... .+++..+..++.+++.||.|||+.+ +|+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence 999999999986543 5788999999999999999999853 39999999999999999999999999987654321
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhh---cCccccc-----
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVS---CGKLSSI----- 693 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~---~~~~~~~----- 693 (816)
.....||..|+|||++.+..++.++|||||||++|+|++|+.||..... ....+. .+.....
T Consensus 159 --------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 159 --------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR 230 (333)
T ss_pred --------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcc
Confidence 2344689999999999988899999999999999999999999964332 111110 0000000
Q ss_pred ----------------------------cCCCCCCCC-HHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 694 ----------------------------LDPLAGDWP-TFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 694 ----------------------------~d~~~~~~~-~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
........+ ...+..+.+|+.+||+.||.+||++.+.+.+.+-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~ 302 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFI 302 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHH
Confidence 000000000 1134678999999999999999999977766654
No 60
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-36 Score=351.38 Aligned_cols=257 Identities=21% Similarity=0.277 Sum_probs=207.0
Q ss_pred HHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--
Q 003481 463 ADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-- 536 (816)
Q Consensus 463 ~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-- 536 (816)
..+....++|.+.+.||+|+||.||++++. |..||||++..... .....+.+|+.++..++|+||+++++.+..
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 445556689999999999999999999874 88999999876533 334568899999999999999999876521
Q ss_pred --------CccceeeccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCC
Q 003481 537 --------AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 607 (816)
Q Consensus 537 --------~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~ 607 (816)
..++||||+++|+|.++|.... ....+++..+..|+.|++.||.|||+.+ |+||||||+||||+.++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGL 181 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCC
Confidence 1579999999999999987542 2356899999999999999999999987 999999999999999999
Q ss_pred eeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHh
Q 003481 608 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAV 685 (816)
Q Consensus 608 vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~ 685 (816)
+||+|||+++........ .......||+.|+|||++.+..++.++|||||||+||||++|+.||..... +...+
T Consensus 182 vkL~DFGls~~~~~~~~~----~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~ 257 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSD----DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT 257 (496)
T ss_pred EEEEecccCeeccccccc----cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 999999999876532211 123456799999999999999999999999999999999999999975432 22222
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 686 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 686 ~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
..+.. ...+...+..+.+|+.+||+.||.+||++.+.+.+.
T Consensus 258 ~~~~~--------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p 298 (496)
T PTZ00283 258 LAGRY--------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298 (496)
T ss_pred hcCCC--------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence 22221 123344567899999999999999999999766543
No 61
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.8e-37 Score=333.54 Aligned_cols=235 Identities=27% Similarity=0.355 Sum_probs=189.4
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCC---cccHHHHHHHHHHHhcC-CCCceeeEecccc--CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|.+. +..||||++.... ......+..|..++..+ +||||+++++++. +..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999885 6789999997542 22334456677777654 8999999999874 358899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---- 150 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---- 150 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC----
Confidence 99999886543 5888999999999999999999987 9999999999999999999999999998653322
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. ...+... ...+|...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~---------~~~~~~~~ 219 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND---------RPHFPRWI 219 (316)
T ss_pred --CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---------CCCCCCCC
Confidence 1234557999999999999889999999999999999999999999754432 1111111 12234445
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+..+.+|+.+||+.||.+||++.+.+
T Consensus 220 ~~~~~~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 220 SKEAKDCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHH
Confidence 67889999999999999999986444
No 62
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4e-37 Score=326.38 Aligned_cols=245 Identities=36% Similarity=0.622 Sum_probs=191.8
Q ss_pred ccceeeeecceEEEEEEEc------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 474 ESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 474 ~~~~LG~G~~g~Vy~~~~~------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
..+.||.|.||.||+|.+. +..|+||.+..... .....|.+|++.+.+++||||++++|+|. +..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3467999999999999987 67899999965433 34678999999999999999999999995 347899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++|+|.++|.... ...+++..++.|+.||+.||.|||+.+ |+|+||+|+|||++.++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccc-ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 99999999998762 246899999999999999999999987 99999999999999999999999999988733221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~ 701 (816)
. .......+...|+|||.+....++.++||||||+++|||++ |+.||..... +...+..+... ..
T Consensus 159 ~----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~ 226 (259)
T PF07714_consen 159 Y----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRL--------PI 226 (259)
T ss_dssp E----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEET--------TS
T ss_pred c----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ee
Confidence 1 12334457788999999999999999999999999999999 7899864332 22333333221 12
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+...+..+.+++..||..+|.+||++. .+.+.|
T Consensus 227 ~~~~~~~~~~li~~C~~~~p~~RPs~~-~i~~~L 259 (259)
T PF07714_consen 227 PDNCPKDIYSLIQQCWSHDPEKRPSFQ-EILQEL 259 (259)
T ss_dssp BTTSBHHHHHHHHHHT-SSGGGS--HH-HHHHHH
T ss_pred ccchhHHHHHHHHHHcCCChhhCcCHH-HHHhcC
Confidence 333556889999999999999999999 555443
No 63
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.7e-36 Score=321.87 Aligned_cols=249 Identities=27% Similarity=0.434 Sum_probs=201.8
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 546 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~ 546 (816)
+|...+.||.|+||.||+|.+. +..||+|.+... ......+.+|+.++.+++||||++++++|. +..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4777889999999999999875 788999998654 334567899999999999999999999984 34789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+++|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.........
T Consensus 86 ~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~- 160 (263)
T cd05052 86 YGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT- 160 (263)
T ss_pred CCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceee-
Confidence 9999999865432 45899999999999999999999987 999999999999999999999999999876543211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......++..|+|||++.+..++.++|||||||++|+|++ |..||..... ....+..+. ....+.
T Consensus 161 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 228 (263)
T cd05052 161 ----AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY--------RMERPE 228 (263)
T ss_pred ----ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC--------CCCCCC
Confidence 1122334678999999998999999999999999999998 9999864332 222222211 112333
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
..+..+.+++.+||+.+|.+||++. .+.+.|+.+
T Consensus 229 ~~~~~~~~li~~cl~~~p~~Rp~~~-~l~~~l~~~ 262 (263)
T cd05052 229 GCPPKVYELMRACWQWNPSDRPSFA-EIHQAFETM 262 (263)
T ss_pred CCCHHHHHHHHHHccCCcccCCCHH-HHHHHHHhh
Confidence 4567899999999999999999999 677777754
No 64
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.9e-36 Score=326.12 Aligned_cols=255 Identities=28% Similarity=0.449 Sum_probs=206.1
Q ss_pred cCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSL 540 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~l 540 (816)
++|.+.+.||.|+||.||++... +..||+|.+..........+.+|+.++.+++||||++++++|. +..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46888899999999999999752 4568999987665555667999999999999999999999984 45889
Q ss_pred eeeccCCCchhhhhhhcC----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeE
Q 003481 541 VYEYLPNGSLQDRLFRKS----------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 610 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL 610 (816)
||||+++++|.+++.... ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 999999999999986542 1235899999999999999999999987 999999999999999999999
Q ss_pred eecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhc
Q 003481 611 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSC 687 (816)
Q Consensus 611 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~ 687 (816)
+|||+++........ .......+++.|+|||++.+..++.++|||||||++|+|+| |.+||.... .....+..
T Consensus 162 ~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 162 GDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred ccCCccccccCCcee----ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999865432211 11233456788999999998899999999999999999998 999986433 23333333
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 688 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
+.... .+...+..+.+|+.+||+.||.+||++. ++...|+.+..
T Consensus 238 ~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~-~v~~~l~~~~~ 281 (288)
T cd05093 238 GRVLQ--------RPRTCPKEVYDLMLGCWQREPHMRLNIK-EIHSLLQNLAK 281 (288)
T ss_pred CCcCC--------CCCCCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHHHHH
Confidence 33221 1222445799999999999999999999 77888887753
No 65
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.8e-37 Score=337.60 Aligned_cols=237 Identities=27% Similarity=0.362 Sum_probs=190.7
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCC---cccHHHHHHHHHHH---hcCCCCceeeEecccc--CCccce
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVL---SKLQHPHLVTLLGACP--EAWSLV 541 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~---~~~~~~~~~E~~il---~~l~HpnIv~l~g~~~--~~~~lV 541 (816)
|.+.+.||+|+||.||+|.+. +..||||++.... ......+..|+.++ ..++||||+++++++. +..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567789999999999999885 7899999997542 12234566676655 5678999999999984 458999
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++|+|..++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 999999999888753 35899999999999999999999988 99999999999999999999999999875432
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~ 699 (816)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+. .
T Consensus 154 ~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~---------~ 218 (324)
T cd05589 154 FG------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE---------V 218 (324)
T ss_pred CC------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------C
Confidence 21 122456799999999999999999999999999999999999999975432 222222221 1
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPS 730 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~ 730 (816)
.+|...+..+.+|+.+||+.||.+||+..+.
T Consensus 219 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 249 (324)
T cd05589 219 RYPRFLSREAISIMRRLLRRNPERRLGSGEK 249 (324)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCC
Confidence 2334456788999999999999999976543
No 66
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.7e-36 Score=320.38 Aligned_cols=246 Identities=26% Similarity=0.458 Sum_probs=197.5
Q ss_pred cCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 546 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~ 546 (816)
++|...+.||+|+||.||++.+. +..+|+|.+.... .....|.+|+.+|++++||||++++++|.+ ..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 35777889999999999999886 5689999876443 334678899999999999999999999854 4889999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+|+|.+++.... ..++|..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05114 83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT- 156 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee-
Confidence 999999886543 35899999999999999999999987 999999999999999999999999998865432211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......++..|+|||++.+..++.++||||||+++|+|++ |+.||..... ....+..+... ..+.
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~--------~~~~ 224 (256)
T cd05114 157 ----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL--------YRPK 224 (256)
T ss_pred ----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC--------CCCC
Confidence 1223345678999999988889999999999999999999 9999965432 22233322211 1122
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
..+..+.+|+.+||+.+|.+||++. +++..|
T Consensus 225 ~~~~~~~~li~~c~~~~p~~Rps~~-~l~~~l 255 (256)
T cd05114 225 LASMTVYEVMYSCWHEKPEGRPTFA-ELLRAI 255 (256)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHH-HHHHhh
Confidence 2446789999999999999999999 454443
No 67
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-36 Score=341.78 Aligned_cols=254 Identities=26% Similarity=0.407 Sum_probs=203.4
Q ss_pred hcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCC-CCceeeEeccccC--C
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--A 537 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~-HpnIv~l~g~~~~--~ 537 (816)
.++|.+.+.||+|+||.||+|++. +..||||++...... ....|.+|+.+|.++. ||||++++|+|.+ .
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 568889999999999999999863 246999999754332 3456899999999996 9999999999954 4
Q ss_pred ccceeeccCCCchhhhhhhcCC----------------------------------------------------------
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN---------------------------------------------------------- 559 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~---------------------------------------------------------- 559 (816)
.+|||||+++|+|.++|.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 8999999999999998865310
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC
Q 003481 560 -----------------------------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS 604 (816)
Q Consensus 560 -----------------------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~ 604 (816)
...+++..++.++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeC
Confidence 124888999999999999999999987 999999999999999
Q ss_pred CCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH---H
Q 003481 605 ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---E 680 (816)
Q Consensus 605 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~---~ 680 (816)
++.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.... .
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY----VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred CCEEEEEeCCcceeccccccc----cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 999999999999876443211 11233457788999999988899999999999999999997 999986432 1
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 681 VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 681 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
....+..+.. ...+...+..+.+|+.+||+.+|++||++. .|.+.|+.+
T Consensus 349 ~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-~l~~~l~~l 397 (400)
T cd05105 349 FYNKIKSGYR--------MAKPDHATQEVYDIMVKCWNSEPEKRPSFL-HLSDIVESL 397 (400)
T ss_pred HHHHHhcCCC--------CCCCccCCHHHHHHHHHHCccCHhHCcCHH-HHHHHHHHH
Confidence 2222222211 112334567899999999999999999999 788888875
No 68
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.3e-37 Score=329.49 Aligned_cols=244 Identities=25% Similarity=0.321 Sum_probs=196.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
+|+..+.||+|+||.||++.+. +..||+|++...... ....+.+|+.++..++||||+++++++. +..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999875 789999998654322 2345778999999999999999999884 45899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 9999999988865432 46899999999999999999999987 9999999999999999999999999998764322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCH
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+...+......++.
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~ 226 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKRE---EVERRVKEDQEEYSE 226 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHH---HHHHHhhhcccccCc
Confidence 1233468999999999998899999999999999999999999997533211000 000011111223445
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 704 FVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
..+..+.+|+.+||..||.+||+..
T Consensus 227 ~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05605 227 KFSEAARSICRQLLTKDPGFRLGCR 251 (285)
T ss_pred ccCHHHHHHHHHHccCCHHHhcCCC
Confidence 5677899999999999999999543
No 69
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.9e-36 Score=319.50 Aligned_cols=250 Identities=28% Similarity=0.448 Sum_probs=202.1
Q ss_pred hcCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
.++|...+.||+|+||.||+|.+. +..||+|.+.... .....|.+|+.++.+++||||+++++++.. ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 456888899999999999999875 6789999987544 345678999999999999999999998844 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.........
T Consensus 84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999986644 246899999999999999999999987 999999999999999999999999999877532211
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~ 702 (816)
......++..|+|||++.+..++.++||||||+++|+|+| |+.||..... ....+..+.. ...+
T Consensus 160 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~~ 226 (261)
T cd05068 160 -----AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR--------MPCP 226 (261)
T ss_pred -----ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--------CCCC
Confidence 1122233468999999998899999999999999999999 9999965432 2222221110 1122
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
...+..+.+++.+||+.+|.+||++. .+...|+.
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~-~l~~~l~~ 260 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFE-TLQWKLED 260 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHH-HHHHHHhc
Confidence 33457899999999999999999999 67777764
No 70
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.9e-36 Score=324.03 Aligned_cols=253 Identities=29% Similarity=0.463 Sum_probs=200.1
Q ss_pred HhcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--C
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--A 537 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~ 537 (816)
.+++|+..+.||+|+||.||+|.+. +..||||++..... .....|.+|+.++..++||||+++++++.+ .
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 5678999999999999999999764 35799999864332 234568899999999999999999999854 4
Q ss_pred ccceeeccCCCchhhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeE
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN-------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 610 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL 610 (816)
.++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ ++|+||||+|||++.++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 7899999999999999865321 234688999999999999999999987 999999999999999999999
Q ss_pred eecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhc
Q 003481 611 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSC 687 (816)
Q Consensus 611 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~ 687 (816)
+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||++ |..||..... ....+..
T Consensus 161 ~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 236 (277)
T cd05062 161 GDFGMTRDIYETDYY----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME 236 (277)
T ss_pred CCCCCccccCCccee----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 999998865443221 11223456788999999998899999999999999999999 7889864332 2222222
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 688 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+... ..+...+..+.+++.+||+.+|.+||++. +++..|+
T Consensus 237 ~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~-e~l~~l~ 276 (277)
T cd05062 237 GGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFL-EIISSIK 276 (277)
T ss_pred CCcC--------CCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHhh
Confidence 2211 12333456899999999999999999999 5555543
No 71
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.6e-36 Score=325.58 Aligned_cols=255 Identities=29% Similarity=0.467 Sum_probs=206.4
Q ss_pred cCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
.+|.....||+|+||.||+|... +..|++|.+..........+.+|+.++++++||||+++++++.+ ..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777789999999999999753 35689999876665556679999999999999999999999854 4789
Q ss_pred eeeccCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCC
Q 003481 541 VYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 607 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~ 607 (816)
||||+++++|.+++..... ...++|..++.|+.||+.||.|||+.+ |+||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 9999999999999975431 234899999999999999999999988 999999999999999999
Q ss_pred eeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHH
Q 003481 608 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRA 684 (816)
Q Consensus 608 vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~ 684 (816)
++|+|||++........ ........++..|+|||++.+..++.++|||||||++|+|+| |..||..... ....
T Consensus 162 ~~l~dfg~a~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred EEECCCCcccccCCCce----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99999999976543321 112234557889999999998999999999999999999999 9999854332 2233
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 685 VSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 685 ~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
+..+... ..+...+..+.+|+.+||+.+|.+||++. .+.+.|+.+..
T Consensus 238 ~~~~~~~--------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~-~v~~~l~~~~~ 284 (291)
T cd05094 238 ITQGRVL--------ERPRVCPKEVYDIMLGCWQREPQQRLNIK-EIYKILHALGK 284 (291)
T ss_pred HhCCCCC--------CCCccCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHHh
Confidence 3333222 12223456799999999999999999999 78889888754
No 72
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.9e-36 Score=322.25 Aligned_cols=251 Identities=26% Similarity=0.399 Sum_probs=199.3
Q ss_pred CCCccceeeeecceEEEEEEEc--Ce----EEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-Ccccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GR----TVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~----~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~ 542 (816)
+|...+.||.|+||.||+|.+. +. .|++|.+..... ....++..|+.++.+++||||++++|++.+ ..++++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~ 87 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVT 87 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEE
Confidence 5677789999999999999884 43 478888754332 223467788889999999999999999854 467999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... ..++|..++.|+.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 88 e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 88 QLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 9999999999997644 36899999999999999999999987 999999999999999999999999999876543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~ 699 (816)
... .......++..|+|||++.++.++.++|||||||++|||++ |..||..... ....+..+....
T Consensus 163 ~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------- 231 (279)
T cd05111 163 DKK----YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLA------- 231 (279)
T ss_pred Ccc----cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC-------
Confidence 211 11234557789999999998899999999999999999998 9999965332 233333332211
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
.+...+..+.+++.+||..+|.+||++. ++.+.|..+.
T Consensus 232 -~~~~~~~~~~~li~~c~~~~p~~Rps~~-el~~~l~~~~ 269 (279)
T cd05111 232 -QPQICTIDVYMVMVKCWMIDENVRPTFK-ELANEFTRMA 269 (279)
T ss_pred -CCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHHHH
Confidence 1112345678899999999999999998 6777777654
No 73
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6e-37 Score=341.44 Aligned_cols=251 Identities=23% Similarity=0.305 Sum_probs=195.5
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||+|+||.||+++.. ++.||||++..... .....+.+|+.+|..++||||++++++|.+ ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999885 78999999975422 223457889999999999999999999844 488999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999987643 5889999999999999999999988 999999999999999999999999999765322
Q ss_pred CCcCC--------------------------------CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh
Q 003481 623 TLYLP--------------------------------SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 670 (816)
Q Consensus 623 ~~~~~--------------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt 670 (816)
..... .........||+.|+|||++....++.++|||||||++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 11000 0001123469999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHH--HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCC---ChHHHH
Q 003481 671 GRLPVGLAGEVRR--AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPD---ITPSLV 732 (816)
Q Consensus 671 G~~Pf~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs---~~e~l~ 732 (816)
|..||........ .+..... ...-+. ....+..+.+|+.+|+. +|.+|++ +.+.+.
T Consensus 235 G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~----~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 235 GYPPFCSDNPQETYRKIINWKE-TLQFPD----EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC-ccCCCC----CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999975443221 1111110 000011 11245678899999996 9999998 654443
No 74
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6e-37 Score=336.02 Aligned_cols=237 Identities=26% Similarity=0.322 Sum_probs=192.8
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC---cccHHHHHHHHHHHhcCCCC-ceeeEecccc--CCcccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKLQHP-HLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l~Hp-nIv~l~g~~~--~~~~lV~ 542 (816)
+|.+.+.||+|+||.||+|... ++.||||++.... ......+..|..++..+.|+ +|+++++++. +..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999886 6789999987542 23345678899999999765 5788888774 4589999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999886543 5889999999999999999999987 999999999999999999999999998753221
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~ 700 (816)
. .......||+.|+|||++.+..++.++|||||||++|+|+||+.||...... ...+..+ ...
T Consensus 155 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~---------~~~ 219 (324)
T cd05587 155 G------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH---------NVS 219 (324)
T ss_pred C------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---------CCC
Confidence 1 1123456999999999999999999999999999999999999999754432 2222211 122
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
+|...+..+.+|+.+||..||.+||+..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 220 YPKSLSKEAVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence 3444567899999999999999999874
No 75
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.9e-37 Score=328.31 Aligned_cols=238 Identities=23% Similarity=0.347 Sum_probs=190.9
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCch
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 550 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL 550 (816)
||+|+||.||++.+. ++.||+|.+...... ....+..|+.++..++||||+++++++.. ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999875 789999998754332 23457789999999999999999998743 48899999999999
Q ss_pred hhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCc
Q 003481 551 QDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 629 (816)
Q Consensus 551 ~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 629 (816)
.+++.... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----- 152 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS----- 152 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-----
Confidence 98875432 2346899999999999999999999987 99999999999999999999999999987654321
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHHHHH
Q 003481 630 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVAR 707 (816)
Q Consensus 630 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~ 707 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ...+... ++.. ...++...+.
T Consensus 153 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~ 226 (280)
T cd05608 153 -KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR----ILND-SVTYPDKFSP 226 (280)
T ss_pred -cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh----hccc-CCCCcccCCH
Confidence 123457899999999999999999999999999999999999999643211 1111111 1111 1133445677
Q ss_pred HHHHHHHHhhccCCCCCCCChH
Q 003481 708 RLVDLGLQCCELYGRERPDITP 729 (816)
Q Consensus 708 ~l~~Li~~cl~~dP~~RPs~~e 729 (816)
.+.+|+.+||+.||.+||++.+
T Consensus 227 ~~~~li~~~l~~~P~~R~~~~~ 248 (280)
T cd05608 227 ASKSFCEALLAKDPEKRLGFRD 248 (280)
T ss_pred HHHHHHHHHhcCCHHHhcCCCC
Confidence 8999999999999999997653
No 76
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.3e-37 Score=325.48 Aligned_cols=251 Identities=30% Similarity=0.524 Sum_probs=207.0
Q ss_pred HhcCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
...+|...++||.|+||.||+|.+. +..|++|++..........+.+|+.++..++||||+++++++.+ ..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 3457888899999999999999886 68899999987766566789999999999999999999998843 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++........
T Consensus 84 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 84 MEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred cccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 999999999976432 46899999999999999999999987 99999999999999999999999999987654321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~ 701 (816)
......++..|+|||++....++.++||||||+++|+|++ |+.||..... ....+..+. ....
T Consensus 160 ------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~ 225 (261)
T cd05148 160 ------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY--------RMPC 225 (261)
T ss_pred ------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC--------cCCC
Confidence 1223446778999999988899999999999999999998 8999964332 222222111 1122
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
+...+..+.+++.+||+.+|.+||++. ++.+.|+.
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~-~l~~~L~~ 260 (261)
T cd05148 226 PAKCPQEIYKIMLECWAAEPEDRPSFK-ALREELDN 260 (261)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHhc
Confidence 334557899999999999999999999 78788764
No 77
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.5e-37 Score=339.64 Aligned_cols=252 Identities=25% Similarity=0.318 Sum_probs=199.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|.+.+.||+|+||.||+|.+. +..||||++..... .....+..|+.++..++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47889999999999999999986 89999999975432 334568899999999999999999998844 588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++... ..+++..+..|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999765 35889999999999999999999987 999999999999999999999999999876543
Q ss_pred CCc-----------------------CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH
Q 003481 623 TLY-----------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 679 (816)
Q Consensus 623 ~~~-----------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~ 679 (816)
... ...........||+.|+|||++.+..++.++|||||||+||+|++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 200 000012234579999999999999999999999999999999999999997544
Q ss_pred HHHH--HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCC-ChHHHHH
Q 003481 680 EVRR--AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPD-ITPSLVK 733 (816)
Q Consensus 680 ~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs-~~e~l~~ 733 (816)
.... .+... .....-+... ..+..+.+|+.+|+. +|.+||+ +.+.+.+
T Consensus 235 ~~~~~~~i~~~-~~~~~~p~~~----~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 LQETYNKIINW-KESLRFPPDP----PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHHHHhcc-CCcccCCCCC----CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 3221 11110 0001011111 146789999999998 9999999 7755543
No 78
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.9e-37 Score=341.58 Aligned_cols=241 Identities=25% Similarity=0.396 Sum_probs=188.3
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccC
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 546 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~ 546 (816)
|...++||+|+||.||+|++. ++.||||++..... .....+.+|+.++..++|+||+++++++.+ ..++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 445678999999999999885 78999999865433 234568899999999999999999999854 5889999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+|+|.+.. .+.+..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.....
T Consensus 156 ~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 223 (353)
T PLN00034 156 GGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-- 223 (353)
T ss_pred CCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc--
Confidence 99986532 3456778899999999999999988 99999999999999999999999999987653221
Q ss_pred CCccccCCCCCCCCCCCcccccc-----CCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCC
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~ 699 (816)
......||..|+|||++.. ...+.++|||||||++|||++|+.||..... ......... .....
T Consensus 224 ----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~ 294 (353)
T PLN00034 224 ----PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC-----MSQPP 294 (353)
T ss_pred ----cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-----ccCCC
Confidence 1234579999999998743 2345699999999999999999999963211 111111000 00111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
..+...+..+.+|+.+||+.||.+||++.+.+.+
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2233456789999999999999999999965544
No 79
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.1e-37 Score=335.82 Aligned_cols=230 Identities=27% Similarity=0.397 Sum_probs=188.3
Q ss_pred ceeeeecceEEEEEEE-----cCeEEEEEEeccCCc----ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 476 FKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM----QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~-----~g~~vAiK~l~~~~~----~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+.||+|+||.||+++. .++.||+|++..... .....+.+|+.+|..++||||++++++|.. ..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 378899999875322 223457789999999999999999998843 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999986643 5788889999999999999999988 99999999999999999999999999875432221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~ 702 (816)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..+. ..+|
T Consensus 156 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~---------~~~~ 220 (323)
T cd05584 156 ------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK---------LNLP 220 (323)
T ss_pred ------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---------CCCC
Confidence 123457999999999999888999999999999999999999999754432 12222221 1234
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC
Q 003481 703 TFVARRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs 726 (816)
...+..+.+|+.+||+.+|.+||+
T Consensus 221 ~~~~~~~~~li~~~l~~~p~~R~~ 244 (323)
T cd05584 221 PYLTPEARDLLKKLLKRNPSSRLG 244 (323)
T ss_pred CCCCHHHHHHHHHHcccCHhHcCC
Confidence 445678999999999999999994
No 80
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.3e-37 Score=339.50 Aligned_cols=229 Identities=26% Similarity=0.325 Sum_probs=187.1
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNG 548 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~g 548 (816)
+.||+|+||.||++... |..||+|++..... .....+.+|+.++..++||||+++++++.. ..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999874 88999999975432 233467789999999999999999998843 588999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
+|..++.... .+++..+..|+.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--- 151 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--- 151 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc---
Confidence 9998886543 58999999999999999999997 56 99999999999999999999999999876432221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......||+.|+|||++.+..++.++|||||||+||+|+||..||..... ....+..+. ..+|...
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~---------~~~p~~~ 219 (325)
T cd05594 152 ---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---------IRFPRTL 219 (325)
T ss_pred ---ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC---------CCCCCCC
Confidence 12345699999999999999999999999999999999999999964432 112221111 1234445
Q ss_pred HHHHHHHHHHhhccCCCCCC
Q 003481 706 ARRLVDLGLQCCELYGRERP 725 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RP 725 (816)
+..+.+|+.+||+.||.+|+
T Consensus 220 ~~~~~~li~~~L~~dP~~R~ 239 (325)
T cd05594 220 SPEAKSLLSGLLKKDPKQRL 239 (325)
T ss_pred CHHHHHHHHHHhhcCHHHhC
Confidence 67899999999999999997
No 81
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6e-37 Score=335.85 Aligned_cols=237 Identities=27% Similarity=0.346 Sum_probs=193.8
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCcccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~g~~~--~~~~lV~ 542 (816)
+|...+.||+|+||.||+|... +..||||++..... .....+..|..++..+ +||+|+++++++. +..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5788899999999999999886 67899999876432 2234566788888877 5899999998874 3588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999886543 5888999999999999999999987 999999999999999999999999999764322
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~ 700 (816)
.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ....+..+. ..
T Consensus 155 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~---------~~ 219 (323)
T cd05616 155 GV------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN---------VA 219 (323)
T ss_pred CC------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CC
Confidence 21 22455799999999999999999999999999999999999999975443 222222221 12
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
+|...+..+.+|+.+||+.+|.+|++..
T Consensus 220 ~p~~~s~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05616 220 YPKSMSKEAVAICKGLMTKHPGKRLGCG 247 (323)
T ss_pred CCCcCCHHHHHHHHHHcccCHHhcCCCC
Confidence 3445667899999999999999999974
No 82
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=361.44 Aligned_cols=251 Identities=31% Similarity=0.536 Sum_probs=207.2
Q ss_pred CCCccceeeeecceEEEEEEEc---Ce----EEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML---GR----TVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~---g~----~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
+......||+|.||.||.|... |. .||||.+.... .+...+|.+|..+|+.++|||||+++|+|.+ ..+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 3455678999999999999885 33 49999997764 4566789999999999999999999999944 5889
Q ss_pred eeeccCCCchhhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 541 VYEYLPNGSLQDRLFRKS----NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
++|||.+|+|..+|.... ....|+..+.+.|+.|||.|+.||++.+ +|||||...|+||+....|||+|||+|
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchh
Confidence 999999999999998752 1356899999999999999999999988 999999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCC-CCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHH-HhhcCccc
Q 003481 617 RLVTEDTLYLPSFHRSTAP-KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRR-AVSCGKLS 691 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~-~~~~~~~~ 691 (816)
+.+-....+ +.... .-...|||||.+..+.+|.|+|||||||+|||++| |..||...+. +.. ....|++
T Consensus 850 rDiy~~~yy-----r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL- 923 (1025)
T KOG1095|consen 850 RDIYDKDYY-----RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRL- 923 (1025)
T ss_pred Hhhhhchhe-----eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCcc-
Confidence 965544432 22222 33457999999999999999999999999999999 9999976554 223 2333322
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 692 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 692 ~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
+.|..++..+.+|+.+||+.+|++||++. .|++.+..+.
T Consensus 924 --------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~-~i~~q~~~i~ 962 (1025)
T KOG1095|consen 924 --------DPPSYCPEKLYQLMLQCWKHDPEDRPSFR-TIVEQDPAIS 962 (1025)
T ss_pred --------CCCCCCChHHHHHHHHHccCChhhCccHH-HHHhhhhhhh
Confidence 33666778999999999999999999999 6767666653
No 83
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.8e-36 Score=334.05 Aligned_cols=253 Identities=30% Similarity=0.480 Sum_probs=200.7
Q ss_pred cCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcC-CCCceeeEecccc---CC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKL-QHPHLVTLLGACP---EA 537 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l-~HpnIv~l~g~~~---~~ 537 (816)
++|.+.+.||.|+||.||+|... ++.||+|++...... ....+..|+.++.++ +||||++++++|. ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888899999999999999653 367999998754322 334677899999999 8999999999874 24
Q ss_pred ccceeeccCCCchhhhhhhcCC----------------------------------------------------------
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN---------------------------------------------------------- 559 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~---------------------------------------------------------- 559 (816)
.+++|||+++|+|.+++.....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 7899999999999998864321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCC
Q 003481 560 VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 639 (816)
Q Consensus 560 ~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~ 639 (816)
..+++|..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...... .......++.
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~----~~~~~~~~~~ 239 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKGDARLPL 239 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcch----hhccCCCCCc
Confidence 136899999999999999999999987 999999999999999999999999999876433211 1223445678
Q ss_pred CCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH---HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHH
Q 003481 640 PYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQ 715 (816)
Q Consensus 640 ~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~ 715 (816)
.|+|||++.+..++.++|||||||+||||++ |..||.... .....+..+... ..+...+..+.+++.+
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~ 311 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM--------RAPEYATPEIYSIMLD 311 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC--------CCCccCCHHHHHHHHH
Confidence 8999999999999999999999999999998 999996422 222222222111 1123345689999999
Q ss_pred hhccCCCCCCCChHHHHHHHHHh
Q 003481 716 CCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 716 cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
||+.+|.+||++. ++++.|+.+
T Consensus 312 cl~~~p~~RPs~~-ell~~l~~~ 333 (337)
T cd05054 312 CWHNNPEDRPTFS-ELVEILGDL 333 (337)
T ss_pred HccCChhhCcCHH-HHHHHHHHH
Confidence 9999999999999 677777765
No 84
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4e-36 Score=317.82 Aligned_cols=243 Identities=28% Similarity=0.469 Sum_probs=196.3
Q ss_pred eeeeecceEEEEEEEc----CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc-CCccceeeccCCCc
Q 003481 477 KVGQGGFGCVYKGEML----GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLPNGS 549 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~----g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~lV~E~~~~gs 549 (816)
.||+|+||.||+|.+. +..||+|++..... .....|.+|+.++..+.||||++++|++. +..++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 5899999999999753 67899999865433 23457899999999999999999999985 45789999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCc
Q 003481 550 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 629 (816)
Q Consensus 550 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 629 (816)
|.+++.... .+++..++.|+.|++.||.|||+.+ |+||||||.|||++.++.+||+|||++..........
T Consensus 82 L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~--- 152 (257)
T cd05116 82 LNKFLQKNK---HVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY--- 152 (257)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCee---
Confidence 999986543 5889999999999999999999987 9999999999999999999999999998765432110
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcCccccccCCCCCCCCHHHH
Q 003481 630 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 630 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
.......++..|+|||.+....++.++|||||||++|||++ |..||.... .....+..+.. ...|...+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~--------~~~~~~~~ 224 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER--------MECPQRCP 224 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--------CCCCCCCC
Confidence 11122345678999999988889999999999999999998 999996433 23333333221 12334456
Q ss_pred HHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 707 RRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
..+.+||.+||+.||.+||++. .|.+.|+.
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~-~i~~~l~~ 254 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFA-VVELRLRN 254 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHH-HHHHHHhc
Confidence 7899999999999999999998 77777764
No 85
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.5e-36 Score=323.13 Aligned_cols=251 Identities=28% Similarity=0.466 Sum_probs=201.7
Q ss_pred cCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWS 539 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~ 539 (816)
.+|.+.+.||+|+||.||+|... +..||||.+...... ....|.+|+.+|..++||||+++++++.. ..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 45777889999999999999763 367999998765444 45679999999999999999999999843 589
Q ss_pred ceeeccCCCchhhhhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 540 LVYEYLPNGSLQDRLFRKS-----------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
+||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 9999999999999997542 1245889999999999999999999987 9999999999999999999
Q ss_pred eEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHh
Q 003481 609 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAV 685 (816)
Q Consensus 609 kL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~ 685 (816)
||+|||++......... .......+++.|+|||++.+..+++++|||||||++|+|++ |..||..... ....+
T Consensus 162 kl~d~g~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05049 162 KIGDFGMSRDVYTTDYY----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECI 237 (280)
T ss_pred EECCcccceecccCcce----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 99999999765432211 11234456788999999999999999999999999999998 9999854332 22223
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 686 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 686 ~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
..+... ..+...+..+.+++.+||+.||.+||++. ++++.|+
T Consensus 238 ~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-eil~~l~ 279 (280)
T cd05049 238 TQGRLL--------QRPRTCPSEVYDIMLGCWKRDPQQRINIK-DIHERLQ 279 (280)
T ss_pred HcCCcC--------CCCCCCCHHHHHHHHHHcCCCcccCCCHH-HHHHHhh
Confidence 333221 12233556899999999999999999998 5666554
No 86
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.6e-36 Score=317.77 Aligned_cols=249 Identities=32% Similarity=0.466 Sum_probs=201.3
Q ss_pred cCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC-CccceeeccCC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPN 547 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~E~~~~ 547 (816)
++|.+.+.||+|+||.||+|... +..||+|.+..... ....|.+|+.++++++||||+++++++.+ ..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~ 84 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSK 84 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCC
Confidence 46788899999999999999876 67899999876443 34578999999999999999999998743 57899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
++|.+++.... ...+++..++.++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||++.........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-- 158 (260)
T cd05070 85 GSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-- 158 (260)
T ss_pred CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccc--
Confidence 99999986543 245899999999999999999999988 999999999999999999999999999876543211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
......++..|+|||++.+..++.++||||||+++|+|++ |..||..... ....+..+. ....+..
T Consensus 159 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~ 227 (260)
T cd05070 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY--------RMPCPQD 227 (260)
T ss_pred ---cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CCCCCCc
Confidence 1122345678999999988899999999999999999999 8999964332 222222111 1122344
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
.+..+.+|+.+||..+|.+||++. .+...|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~~ 259 (260)
T cd05070 228 CPISLHELMLQCWKKDPEERPTFE-YLQSFLED 259 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHH-HHHHHHhc
Confidence 566899999999999999999999 67677653
No 87
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.2e-36 Score=317.34 Aligned_cols=244 Identities=28% Similarity=0.439 Sum_probs=199.8
Q ss_pred cCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc---CCccceeeccC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP---EAWSLVYEYLP 546 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~---~~~~lV~E~~~ 546 (816)
.+|...+.||+|+||.||++...|..||+|.+.... ....|.+|+.++++++|+|++++++++. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 367888899999999999999999999999986433 3457889999999999999999999752 34789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+++|.+++..... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 84 KGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999876442 45889999999999999999999987 9999999999999999999999999987654321
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcCccccccCCCCCCCCH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
....++..|+|||++.+..++.++|||||||++|+|++ |+.||.... .....+..+.. ...+.
T Consensus 157 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~ 222 (256)
T cd05082 157 ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK--------MDAPD 222 (256)
T ss_pred ------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--------CCCCC
Confidence 22345678999999998899999999999999999998 999986432 22222222211 12233
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
..+..+.+++.+||+.+|.+||++. .+...|+.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~~ 255 (256)
T cd05082 223 GCPPVVYDVMKQCWHLDAATRPSFL-QLREQLEH 255 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHH-HHHHHHhc
Confidence 4567899999999999999999999 66677664
No 88
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.8e-37 Score=312.43 Aligned_cols=252 Identities=24% Similarity=0.315 Sum_probs=200.1
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccc----cCCcccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGAC----PEAWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~--~~~~~~E~~il~~l~HpnIv~l~g~~----~~~~~lV~ 542 (816)
+|...+.|++|.||.||+|++. +..||+|+++...... .-.-.+|+.+|.+++|||||.+-.+. -+..|+||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 4666788999999999999986 7899999997764321 12357999999999999999986554 45699999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
|||+. +|..+|.... .++...++.-+..|++.||+|||.+. |+||||||+|+|+...|.+||+|||+|+.+...
T Consensus 157 e~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 157 EYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 99965 8988887665 57888999999999999999999998 999999999999999999999999999988764
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh----cCccccccCC-
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----CGKLSSILDP- 696 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~----~~~~~~~~d~- 696 (816)
. ...+..+-|..|.|||.+.+ ..|+++.|+||+|||+.||+++++.|.+..++.+... -|.-.+.+-|
T Consensus 231 ~------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 231 L------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred c------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 3 24577789999999998765 4799999999999999999999999976655433211 1111111000
Q ss_pred -------------------CCCCCCHH-HHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 697 -------------------LAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 697 -------------------~~~~~~~~-~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
....++.. .++.-.+|+..+|.+||.+|.|+.+.|.+.
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 01112222 456788999999999999999999765443
No 89
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.2e-37 Score=334.37 Aligned_cols=232 Identities=27% Similarity=0.364 Sum_probs=189.8
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCC---cccHHHHHHHHHHHhcC-CCCceeeEeccccC--CccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|++. ++.||||++.... ......+..|..++..+ +||||+++++++.+ ..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999885 7899999987542 23345677888888876 79999999998844 58899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~--- 151 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK--- 151 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC---
Confidence 99999886543 5889999999999999999999988 99999999999999999999999999876432211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+.. .++...
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~---------~~~~~~ 219 (320)
T cd05590 152 ---TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV---------VYPTWL 219 (320)
T ss_pred ---cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC---------CCCCCC
Confidence 22345799999999999999999999999999999999999999975443 2222222211 223345
Q ss_pred HHHHHHHHHHhhccCCCCCCCCh
Q 003481 706 ARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
+..+.+|+.+||+.||.+||+..
T Consensus 220 ~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 220 SQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred CHHHHHHHHHHcccCHHHCCCCC
Confidence 67889999999999999999984
No 90
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4e-36 Score=356.65 Aligned_cols=264 Identities=22% Similarity=0.254 Sum_probs=205.7
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|.+.++||+|+||.||+|.+. |+.||||++...... ....|.+|+.++++++||||+++++++.+ ..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57889999999999999999885 789999998754322 24568999999999999999999999854 478999
Q ss_pred eccCCCchhhhhhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 543 EYLPNGSLQDRLFRKS--------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
||++||+|.+++.... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 1234677888999999999999999987 9999999999999999999999999
Q ss_pred cceeccCCCCc------------CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH
Q 003481 615 ICRLVTEDTLY------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR 682 (816)
Q Consensus 615 la~~~~~~~~~------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~ 682 (816)
+++........ ...........||+.|+|||++.+..++.++|||||||++|||+||..||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 99876221100 000111234579999999999999999999999999999999999999996433211
Q ss_pred HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 683 RAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 683 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
... ...+ .++.........+..+.+++.+||..||.+||+..+++.+.|+....
T Consensus 239 i~~-~~~i---~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISY-RDVI---LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhh-hhhc---cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111 1111 11111001123456789999999999999999988899998887643
No 91
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.4e-36 Score=323.55 Aligned_cols=243 Identities=23% Similarity=0.315 Sum_probs=191.1
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCch
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 550 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL 550 (816)
||+|+||.||++... |..||+|.+...... ....+..|+.++.+++||||+++++++.+ ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999875 889999998653321 23345679999999999999999998843 48899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcc
Q 003481 551 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 630 (816)
Q Consensus 551 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 630 (816)
.+++..... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------- 149 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK------- 149 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-------
Confidence 988865432 35889999999999999999999987 9999999999999999999999999998765432
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003481 631 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 708 (816)
Q Consensus 631 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 708 (816)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+....+...+.. .....+..
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 225 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF----EHQNFTEE 225 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc----ccccCCHH
Confidence 12345689999999999988899999999999999999999999964321 1111111111111110 11234567
Q ss_pred HHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 709 LVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 709 l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+.+|+.+||+.||.+||++.+.+.+.+
T Consensus 226 ~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 226 SKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred HHHHHHHHhccCHhhCCCCccchhhhh
Confidence 899999999999999999985554443
No 92
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.1e-36 Score=318.52 Aligned_cols=251 Identities=28% Similarity=0.445 Sum_probs=201.6
Q ss_pred cCCCccceeeeecceEEEEEEEc-----CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV 541 (816)
++|...+.||+|+||.||+|.+. ...||||.+...... ....|.+|+.++.+++||||+++++++.+ ..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56888999999999999999874 347999998755432 34578899999999999999999998843 47899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++++|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 99999999999987644 36899999999999999999999987 99999999999999999999999999988752
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~ 698 (816)
.... .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||..... ....+..+.. .+
T Consensus 159 ~~~~----~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~----~~-- 228 (266)
T cd05033 159 SEAT----YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR----LP-- 228 (266)
T ss_pred cccc----eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC----CC--
Confidence 2211 11223345678999999998899999999999999999998 9999854332 2222222211 11
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.+...+..+.+|+.+||+.+|.+||++. ++...|+.+
T Consensus 229 --~~~~~~~~l~~li~~cl~~~p~~Rp~~~-ei~~~l~~~ 265 (266)
T cd05033 229 --PPMDCPSALYQLMLDCWQKDRNERPTFS-QIVSTLDKM 265 (266)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHhh
Confidence 1223456789999999999999999999 677777654
No 93
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.5e-36 Score=331.67 Aligned_cols=235 Identities=29% Similarity=0.368 Sum_probs=189.4
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCC---cccHHHHHHHHHHHhcC-CCCceeeEeccccC--CccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|.+. +..||||++.... ......+..|..++..+ +||||+++++++.+ ..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999886 6789999987642 22334566788888764 99999999999843 58899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 151 (316)
T cd05619 81 GDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--- 151 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC---
Confidence 9999998654 35889999999999999999999987 99999999999999999999999999875432211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+. ..++...
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~---------~~~~~~~ 219 (316)
T cd05619 152 ---KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN---------PCYPRWL 219 (316)
T ss_pred ---ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CCCCccC
Confidence 12345699999999999988999999999999999999999999965432 222222111 1123345
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+..+.+|+.+||+.||.+||++.+.+
T Consensus 220 ~~~~~~li~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 220 TREAKDILVKLFVREPERRLGVKGDI 245 (316)
T ss_pred CHHHHHHHHHHhccCHhhcCCChHHH
Confidence 66889999999999999999997433
No 94
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.7e-36 Score=322.76 Aligned_cols=260 Identities=27% Similarity=0.401 Sum_probs=200.5
Q ss_pred cCCCccceeeeecceEEEEEEE------cCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc----CCcc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEM------LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWS 539 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~------~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~----~~~~ 539 (816)
.+|.+.+.||+|+||.||++.. .+..||+|.+..........|.+|+.++.+++||||+++++++. ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999974 26789999987766555667899999999999999999999762 2478
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
+||||+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 9999999999999986543 35899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH-HHHhhcCcc--------
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV-RRAVSCGKL-------- 690 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~-~~~~~~~~~-------- 690 (816)
....... .......++..|+|||++.+..++.++|||||||++|||++|..|+...... ...+.....
T Consensus 159 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 159 PQDKEYY---KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred cCCCcce---eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 5433110 0112223455699999998889999999999999999999998776433221 111111000
Q ss_pred ccccC-CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 691 SSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 691 ~~~~d-~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
...+. ......+...+..+.+|+.+||..+|.+|||+. ++...|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFS-ELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHhc
Confidence 00000 001112233456899999999999999999999 677777754
No 95
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.3e-37 Score=336.58 Aligned_cols=231 Identities=24% Similarity=0.318 Sum_probs=188.1
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccccC--CccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
+.||+|+||.||++.+. +..||+|++..... .....+..|..++..+ +||||++++++|.+ ..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999885 78999999976432 2334578899999998 79999999999844 48999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---- 150 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---- 150 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC----
Confidence 99998886543 5899999999999999999999988 9999999999999999999999999987532211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH-----------HHHHHhhcCccccccCC
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG-----------EVRRAVSCGKLSSILDP 696 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~-----------~~~~~~~~~~~~~~~d~ 696 (816)
.......||+.|+|||++.+..++.++|||||||++|+|+||+.||.... .....+..+
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-------- 220 (329)
T cd05588 151 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK-------- 220 (329)
T ss_pred --CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--------
Confidence 12234579999999999999999999999999999999999999995321 111111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 697 LAGDWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 697 ~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
....|...+..+.+|+.+||+.||.+||+.
T Consensus 221 -~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 221 -QIRIPRSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred -CCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 112344456789999999999999999985
No 96
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.2e-36 Score=332.50 Aligned_cols=235 Identities=27% Similarity=0.365 Sum_probs=189.5
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCC---cccHHHHHHHHHHHhcC-CCCceeeEeccccC--CccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|.+. |..||+|++.... ......+..|..++..+ +||||+++++++.+ ..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999885 7899999997542 12334567788888754 89999999998844 57899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|..++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 150 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD---- 150 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC----
Confidence 99999886543 5888999999999999999999988 9999999999999999999999999987532211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+. ....+..+ ...++...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~---------~~~~~~~~ 219 (316)
T cd05620 151 --NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD---------TPHYPRWI 219 (316)
T ss_pred --CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---------CCCCCCCC
Confidence 122445799999999999999999999999999999999999999964433 12222111 11223345
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+..+.+|+.+||+.||.+||++.+++
T Consensus 220 ~~~~~~li~~~l~~dP~~R~~~~~~~ 245 (316)
T cd05620 220 TKESKDILEKLFERDPTRRLGVVGNI 245 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHH
Confidence 67889999999999999999986444
No 97
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.9e-36 Score=317.17 Aligned_cols=250 Identities=34% Similarity=0.457 Sum_probs=202.2
Q ss_pred cCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-CCccceeeccCC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLPN 547 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~lV~E~~~~ 547 (816)
++|.+.++||+|+||.||+|.+. +..||+|.+..... ....|.+|+.++.+++||||+++++++. +..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~ 84 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 84 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCC
Confidence 56889999999999999999886 45799999875432 3457899999999999999999999874 457899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++.........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-- 158 (262)
T cd05071 85 GSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-- 158 (262)
T ss_pred CcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccc--
Confidence 99999997543 235799999999999999999999987 999999999999999999999999999876543211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
......++..|+|||+..+..++.++|||||||++|+|+| |..||..... ....+..+. ....+..
T Consensus 159 ---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~ 227 (262)
T cd05071 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY--------RMPCPPE 227 (262)
T ss_pred ---cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC--------CCCCccc
Confidence 1123446778999999988899999999999999999999 8889864322 222221111 0112334
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.+..+.+|+.+||+.+|.+||++. .+...|+.+
T Consensus 228 ~~~~l~~li~~~l~~~p~~Rp~~~-~~~~~l~~~ 260 (262)
T cd05071 228 CPESLHDLMCQCWRKEPEERPTFE-YLQAFLEDY 260 (262)
T ss_pred cCHHHHHHHHHHccCCcccCCCHH-HHHHHHHHh
Confidence 567899999999999999999999 677777754
No 98
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.9e-37 Score=335.76 Aligned_cols=237 Identities=28% Similarity=0.383 Sum_probs=193.2
Q ss_pred ceeeeecceEEEEEEE-----cCeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccC
Q 003481 476 FKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 546 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~-----~g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~ 546 (816)
+.||+|+||.||+++. .|..||+|++..... .....+.+|+.+|.+++||||+++++++.+ ..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 378999999975432 233457789999999999999999999843 4889999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 82 GGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--
Confidence 999999986543 5899999999999999999999988 99999999999999999999999999886543321
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ...+..+. ..+|..
T Consensus 154 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~---------~~~p~~ 220 (318)
T cd05582 154 ----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK---------LGMPQF 220 (318)
T ss_pred ----ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC---------CCCCCC
Confidence 123457999999999999888999999999999999999999999754432 12221111 123444
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
.+..+.+|+.+||+.||.+||++.++++.
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~~~~~ 249 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGPDGVE 249 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHH
Confidence 56789999999999999999998754333
No 99
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.4e-36 Score=323.01 Aligned_cols=257 Identities=28% Similarity=0.422 Sum_probs=199.0
Q ss_pred CC-CccceeeeecceEEEEEEE------cCeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003481 471 NF-SESFKVGQGGFGCVYKGEM------LGRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 538 (816)
Q Consensus 471 ~f-~~~~~LG~G~~g~Vy~~~~------~g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~ 538 (816)
+| ...+.||+|+||.||++.. .+..||+|.+..... .....|.+|+.+|++++||||++++++|.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 7888999999999988753 267899999876533 345578899999999999999999998742 36
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++||||+++++|.+++... .+++..++.|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccc
Confidence 8999999999999998653 4899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH-HHHHhh--cC-----cc
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-VRRAVS--CG-----KL 690 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~-~~~~~~--~~-----~~ 690 (816)
....... ........++..|+|||++....++.++||||||+++|+|+||..||..... ...... .+ .+
T Consensus 157 ~~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05080 157 VPEGHEY---YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL 233 (283)
T ss_pred cCCcchh---hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhh
Confidence 6543211 0111233456779999999888899999999999999999999999864322 111110 00 01
Q ss_pred ccccCCC-CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 691 SSILDPL-AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 691 ~~~~d~~-~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
...++.. ....+...+..+.+++.+||+.+|.+||++. .++..|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~-~i~~~l~~~ 281 (283)
T cd05080 234 IELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFR-SLIPILKEM 281 (283)
T ss_pred hhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHH-HHHHHHHHh
Confidence 1111111 1112334567899999999999999999999 677787765
No 100
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=337.36 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=205.5
Q ss_pred cCCCccceeeeecceEEEEEEEc---C--eE-EEEEEeccCC---cccHHHHHHHHHHHhcCCCCceeeEecccc--CCc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML---G--RT-VAIKMLYSHN---MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAW 538 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~---g--~~-vAiK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~ 538 (816)
++....++||+|.||.||+|++. + .. ||||...... .....+|.+|.+++++++|||||++||++. +..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 34455589999999999999885 2 23 8999987532 345668999999999999999999999984 458
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
+||||+|+||+|.++|.+... .++..+++.++.+.|.||+|||+.+ +|||||-..|+|++.++.+||+|||+++.
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999987653 6899999999999999999999988 99999999999999999999999999876
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccC
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILD 695 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d 695 (816)
...-.. ......-...|+|||.+..+.|++++|||||||++||+++ |..||..... +...+....+
T Consensus 312 ~~~~~~------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~----- 380 (474)
T KOG0194|consen 312 GSQYVM------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY----- 380 (474)
T ss_pred Ccceee------ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc-----
Confidence 541110 0112235578999999999999999999999999999999 8889975443 3344422111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhhccc
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 743 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~~~~ 743 (816)
....|...+..+..++.+||..+|++||+|. .+.+.|+.+.....
T Consensus 381 --r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~-~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 381 --RMPIPSKTPKELAKVMKQCWKKDPEDRPTMS-TIKKKLEALEKKKE 425 (474)
T ss_pred --cCCCCCCCHHHHHHHHHHhccCChhhccCHH-HHHHHHHHHHhccc
Confidence 1123345667888999999999999999999 78888887755433
No 101
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.7e-36 Score=339.99 Aligned_cols=256 Identities=21% Similarity=0.249 Sum_probs=194.9
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
.|...+.||+|+||.||+|++. +..||||++..... .....+.+|+.++.+++||||+++++++.+ ..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888899999999999999885 78999999976432 233468899999999999999999999853 5889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987643 5888999999999999999999987 9999999999999999999999999986432100
Q ss_pred Cc-----------------------------------------CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHH
Q 003481 624 LY-----------------------------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFG 662 (816)
Q Consensus 624 ~~-----------------------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlG 662 (816)
.. ...........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 00 0000011245799999999999988999999999999
Q ss_pred HHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHH--hhccCCCCCCCChHHHHHHH
Q 003481 663 LIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQ--CCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 663 viL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~--cl~~dP~~RPs~~e~l~~~L 735 (816)
|++|||+||..||..................+ .. ......+..+.+|+.+ |+..+|..||++.+.+.+.+
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~-~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~ 307 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENTL--HI-PPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF 307 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHcccccc--CC-CCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcc
Confidence 99999999999997544322111110000000 00 0111245678888887 55666677999997665543
No 102
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-36 Score=337.65 Aligned_cols=246 Identities=19% Similarity=0.226 Sum_probs=190.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
++|.+.+.||+|+||.||++.+. ++.||||.... ..+.+|+.+|++++||||++++++|. ...++|+|++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 57999999999999999999885 78999997532 34678999999999999999999884 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
. ++|..++.... .+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 166 ~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~- 237 (391)
T PHA03212 166 K-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA- 237 (391)
T ss_pred C-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccccc-
Confidence 5 68888876543 5889999999999999999999987 99999999999999999999999999975432111
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH----------HHHHHhh-cCcc----
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG----------EVRRAVS-CGKL---- 690 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~----------~~~~~~~-~~~~---- 690 (816)
.......||+.|+|||++.+..++.++|||||||+||||+||+.||.... .+...+. .|..
T Consensus 238 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 238 ----NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred ----cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 12234579999999999999999999999999999999999998863211 0100000 0000
Q ss_pred --------ccc---------cCCC-CCCCC--HHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 691 --------SSI---------LDPL-AGDWP--TFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 691 --------~~~---------~d~~-~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
... ..+. ...|. ...+..+.+|+.+||+.||.+|||+.+.+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000 0000 00111 1245689999999999999999999965543
No 103
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.3e-36 Score=319.35 Aligned_cols=253 Identities=27% Similarity=0.424 Sum_probs=201.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--Ce----EEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-Cccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GR----TVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~----~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV 541 (816)
++|...+.||.|+||.||+|.+. +. .||+|++..... .....+.+|+.++..++||||++++++|.. ..+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~ 86 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV 86 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence 46788899999999999999864 33 589999875433 334578899999999999999999999844 57899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
++|+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 87 TQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 99999999999986543 36899999999999999999999987 99999999999999999999999999987754
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~~d~~~ 698 (816)
.... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.... .....+..+...
T Consensus 162 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------- 230 (279)
T cd05109 162 DETE----YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL------- 230 (279)
T ss_pred ccce----eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC-------
Confidence 3211 11223345778999999988899999999999999999998 999986432 222333322211
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
..+...+..+.+++.+||..||..||++. .+.+.|+.+..
T Consensus 231 -~~~~~~~~~~~~li~~~l~~dp~~Rp~~~-~l~~~l~~~~~ 270 (279)
T cd05109 231 -PQPPICTIDVYMIMVKCWMIDSECRPRFR-ELVDEFSRMAR 270 (279)
T ss_pred -CCCccCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHhhc
Confidence 11223456889999999999999999999 56677776643
No 104
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.1e-37 Score=317.73 Aligned_cols=255 Identities=25% Similarity=0.353 Sum_probs=196.8
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc----C---Cccc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP----E---AWSL 540 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~----~---~~~l 540 (816)
-.|...+++|.|+||.||+|... +..||||+.-.+..- -.+|+.+|+.+.|||||+|+.+|. . ...|
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 35667789999999999999986 689999987654432 236999999999999999998872 2 2458
Q ss_pred eeeccCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-CCeeEeeccccee
Q 003481 541 VYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICRL 618 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkL~DFGla~~ 618 (816)
|||||+. +|.+.+... .....++.-.+.-+..||++||.|||+.+ |+||||||.|||+|.+ |.+||||||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999976 888888742 11245777778889999999999999987 9999999999999976 8999999999999
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh-----------
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----------- 686 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~----------- 686 (816)
+..+.. ......|..|.|||.+.+ ..|+.+.||||.||++.||+-|++-|.+.+.+.++..
T Consensus 176 L~~~ep-------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e 248 (364)
T KOG0658|consen 176 LVKGEP-------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRE 248 (364)
T ss_pred eccCCC-------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHH
Confidence 876653 244567889999997765 5799999999999999999999999975444332211
Q ss_pred ---cC-------ccccccCCCCCC-CCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH-HHhh
Q 003481 687 ---CG-------KLSSILDPLAGD-WPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL-EQLH 739 (816)
Q Consensus 687 ---~~-------~~~~~~d~~~~~-~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L-e~l~ 739 (816)
.. ++..+....... +....++++.+|+.++|.++|.+|.+..+.+.+.+ +.+.
T Consensus 249 ~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 249 DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 00 111111111111 33456778999999999999999999998887765 4443
No 105
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.7e-37 Score=334.20 Aligned_cols=240 Identities=26% Similarity=0.336 Sum_probs=190.6
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHH-HHhcCCCCceeeEecccc--CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVR-VLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~-il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|.+. |+.||||++..... .....+..|.. +++.++||||+++++++. +..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999985 88999999865422 22234555554 567899999999999884 358899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|..++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---- 150 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS---- 150 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC----
Confidence 99999886543 5888999999999999999999988 9999999999999999999999999987543221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+. ....+..+.. ..+...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---------~~~~~~ 219 (323)
T cd05575 151 --KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL---------RLKPNI 219 (323)
T ss_pred --CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC---------CCCCCC
Confidence 122445699999999999999999999999999999999999999965432 2222222211 122234
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+..+.+|+.+||+.||.+||++.+.+.+.++
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~il~ 250 (323)
T cd05575 220 SVSARHLLEGLLQKDRTKRLGAKDDFLEIKN 250 (323)
T ss_pred CHHHHHHHHHHhhcCHHhCCCCCCCHHHHHc
Confidence 6789999999999999999999755545444
No 106
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=7.7e-36 Score=317.92 Aligned_cols=251 Identities=24% Similarity=0.401 Sum_probs=197.0
Q ss_pred CCccceeeeecceEEEEEEEc--C--eEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--------C
Q 003481 472 FSESFKVGQGGFGCVYKGEML--G--RTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--------A 537 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g--~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--------~ 537 (816)
|.+.+.||+|+||.||+|.+. + ..||+|.+.... ......|..|+.++..++||||++++++|.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 345678999999999999885 3 269999886543 2334578899999999999999999997621 2
Q ss_pred ccceeeccCCCchhhhhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 538 WSLVYEYLPNGSLQDRLFRK---SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
.++||||+++|+|.+++... .....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 57999999999999887432 12345899999999999999999999977 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccc
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLS 691 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~ 691 (816)
+++........ .......+++.|++||++....++.++|||||||++|+|++ |+.||..... ....+..+...
T Consensus 158 ~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 233 (272)
T cd05075 158 LSKKIYNGDYY----RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL 233 (272)
T ss_pred cccccCcccce----ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 99876543211 11223346778999999998899999999999999999999 8899964332 22333333221
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 692 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 692 ~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
..+...+..+.+++.+||+.+|.+||++. .|...|+.+
T Consensus 234 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~l~~~l~~~ 271 (272)
T cd05075 234 --------KQPPDCLDGLYSLMSSCWLLNPKDRPSFE-TLRCELEKA 271 (272)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHhh
Confidence 11223456789999999999999999999 676777653
No 107
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.4e-36 Score=321.46 Aligned_cols=251 Identities=30% Similarity=0.444 Sum_probs=198.7
Q ss_pred cCCCccceeeeecceEEEEEEE------cCeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEM------LGRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSL 540 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~------~g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~l 540 (816)
.+|+..+.||+|+||.||+|.+ .+..|++|.+..... .....|.+|+.+++.++||||+++++++. +..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3567778999999999999985 257899999875433 33457889999999999999999999874 45789
Q ss_pred eeeccCCCchhhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC
Q 003481 541 VYEYLPNGSLQDRLFRKSN--------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL 606 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~ 606 (816)
||||+++++|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 9999999999999854321 235789999999999999999999987 99999999999999999
Q ss_pred CeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHH
Q 003481 607 SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRR 683 (816)
Q Consensus 607 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~ 683 (816)
.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.... .+..
T Consensus 162 ~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05090 162 HVKISDLGLSREIYSADYY----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE 237 (283)
T ss_pred cEEeccccccccccCCcce----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999876433211 11233446778999999988889999999999999999998 999986433 2223
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 684 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 684 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
.+..+... ..+...+..+.+++.+||+.+|.+||++. .+.+.|.
T Consensus 238 ~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~-~i~~~l~ 281 (283)
T cd05090 238 MVRKRQLL--------PCSEDCPPRMYSLMTECWQEGPSRRPRFK-DIHTRLR 281 (283)
T ss_pred HHHcCCcC--------CCCCCCCHHHHHHHHHHcccCcccCcCHH-HHHHHhh
Confidence 33222211 12333456899999999999999999999 5665554
No 108
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.6e-36 Score=321.55 Aligned_cols=251 Identities=26% Similarity=0.358 Sum_probs=199.0
Q ss_pred HHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC------
Q 003481 466 QTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE------ 536 (816)
Q Consensus 466 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~------ 536 (816)
+.+++.|...+.||+|+||.||+|... +..||+|++.... .....+.+|+.++.++ +||||++++++|..
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 356778999999999999999999885 7889999986543 3455788999999998 79999999998742
Q ss_pred --CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 537 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 537 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCC
Confidence 3689999999999999987643 246899999999999999999999987 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCc
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK 689 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~ 689 (816)
++....... .......|++.|+|||++. ...++.++|||||||++|+|++|+.||..............
T Consensus 157 ~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~ 230 (272)
T cd06637 157 VSAQLDRTV------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 230 (272)
T ss_pred Cceeccccc------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc
Confidence 998654322 1234557899999999885 34688899999999999999999999964433222211110
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 690 LSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 690 ~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.+.....+...+..+.+|+.+||..+|.+||++.+.+.
T Consensus 231 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 -----NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -----CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00000111224567899999999999999999985543
No 109
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.9e-36 Score=319.49 Aligned_cols=248 Identities=25% Similarity=0.309 Sum_probs=196.6
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
++|.+.+.||+|+||.||+|+.. +..||+|++..........+.+|+.++.+++||||+++++++. +..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 47889999999999999999874 7889999997665555567889999999999999999999884 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 89 ~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06646 89 GGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIA- 161 (267)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeeccccc-
Confidence 999999988654 35889999999999999999999987 99999999999999999999999999987643221
Q ss_pred CCCccccCCCCCCCCCCCccccc---cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~ 702 (816)
......|++.|+|||.+. ...++.++|||||||++|+|++|+.||............. ...+.+.....+
T Consensus 162 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~ 234 (267)
T cd06646 162 -----KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMS--KSNFQPPKLKDK 234 (267)
T ss_pred -----ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeee--cCCCCCCCCccc
Confidence 123456889999999874 4457889999999999999999999985433221111100 000111111112
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...+..+.+|+.+||..+|.+||++.+.+
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il 263 (267)
T cd06646 235 TKWSSTFHNFVKISLTKNPKKRPTAERLL 263 (267)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence 23456899999999999999999998544
No 110
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.4e-36 Score=333.05 Aligned_cols=241 Identities=26% Similarity=0.342 Sum_probs=194.2
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCC-CCceeeEecccc--CCcccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~-HpnIv~l~g~~~--~~~~lV~ 542 (816)
+|...+.||+|+||.||++... |..||+|++..... .....+..|..++..+. |++|+++++++. +..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4777889999999999999875 78999999875422 23345778999998885 577888888774 3588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999886543 5899999999999999999999987 999999999999999999999999998764322
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~ 700 (816)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+. ..
T Consensus 155 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~---------~~ 219 (323)
T cd05615 155 GV------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN---------VS 219 (323)
T ss_pred Cc------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CC
Confidence 21 12345699999999999988999999999999999999999999975432 222222211 12
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
+|...+..+.+|+.+||+.+|.+|++..+...
T Consensus 220 ~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 251 (323)
T cd05615 220 YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGE 251 (323)
T ss_pred CCccCCHHHHHHHHHHcccCHhhCCCCCCCCH
Confidence 34445678899999999999999999764333
No 111
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.3e-37 Score=335.93 Aligned_cols=238 Identities=29% Similarity=0.388 Sum_probs=190.9
Q ss_pred CCCccceeeeecceEEEEEEE-----cCeEEEEEEeccCCc----ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cc
Q 003481 471 NFSESFKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM----QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AW 538 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~-----~g~~vAiK~l~~~~~----~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~ 538 (816)
+|.+.+.||+|+||.||+++. .+..||+|++..... .....+..|+.++..+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 578889999999999999876 378899999865322 2334678899999999 59999999988844 47
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 89999999999999987643 5889999999999999999999988 99999999999999999999999999986
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChH------HHHHHhhcCccc
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAG------EVRRAVSCGKLS 691 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~------~~~~~~~~~~~~ 691 (816)
....... ......||+.|+|||++.+. .++.++|||||||++|+|+||+.||.... .+...+..
T Consensus 155 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~---- 225 (332)
T cd05614 155 FLSEEKE-----RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK---- 225 (332)
T ss_pred ccccCCC-----ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc----
Confidence 5432211 12345799999999998765 47899999999999999999999995321 11111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 692 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 692 ~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
....++...+..+.+|+.+||+.||.+||+..
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 226 -----CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 11123444567889999999999999999543
No 112
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-37 Score=318.98 Aligned_cols=261 Identities=24% Similarity=0.326 Sum_probs=207.9
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEec--cCCcccHHHHHHHHHHHhcCCCCceeeEecccc----
Q 003481 464 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLY--SHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP---- 535 (816)
Q Consensus 464 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~--~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~---- 535 (816)
+...+...|...+.||.|+||.|..+.+. |..||||++. .......++..+|+.+|+.++|+||+.+++.+.
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 33445566777889999999999999885 8999999997 445556677889999999999999999999872
Q ss_pred ---CCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEee
Q 003481 536 ---EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICD 612 (816)
Q Consensus 536 ---~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~D 612 (816)
.+.|+|+|+| +.+|...|.... .|+...+..++.||++||.|+|+.+ |+||||||+|+|++.+..+||+|
T Consensus 96 ~~f~DvYiV~elM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~D 168 (359)
T KOG0660|consen 96 DKFNDVYLVFELM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICD 168 (359)
T ss_pred cccceeEEehhHH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecc
Confidence 2489999999 668999886543 4888999999999999999999998 99999999999999999999999
Q ss_pred cccceeccCCCCcCCCccccCCCCCCCCCCCcccc-ccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH-------
Q 003481 613 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH-RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA------- 684 (816)
Q Consensus 613 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~------- 684 (816)
||+|+..... +.....+..+.|..|.|||++ ....||.+.||||.||||.||++|++-|.+.+.+.+.
T Consensus 169 FGLAR~~~~~----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~l 244 (359)
T KOG0660|consen 169 FGLARYLDKF----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELL 244 (359)
T ss_pred ccceeecccc----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhc
Confidence 9999988643 122345778899999999976 4568999999999999999999999999654443221
Q ss_pred ----------hhcCccccccCCC--C------CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 685 ----------VSCGKLSSILDPL--A------GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 685 ----------~~~~~~~~~~d~~--~------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+...+....+... . .-+| ...+...+|+.+||..||.+|+|+.++|.+..-
T Consensus 245 GtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPYl 313 (359)
T KOG0660|consen 245 GTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPYL 313 (359)
T ss_pred CCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChhh
Confidence 1111111111110 0 1122 456688999999999999999999988877653
No 113
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.4e-36 Score=314.86 Aligned_cols=245 Identities=28% Similarity=0.469 Sum_probs=202.9
Q ss_pred cCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
++|...+.||.|+||.||+|...|+.||+|.+..... ....+.+|+.++..++|+||+++++++. +..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 4678889999999999999999999999999976544 4567899999999999999999999884 458899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
++|.+++..... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||+++......
T Consensus 85 ~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 85 GSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred CcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence 999999876542 35899999999999999999999988 9999999999999999999999999998764322
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
....++..|+|||++..+.++.++||||||+++|+|++ |..||..... ....+..+.. ...+..
T Consensus 157 -----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 223 (256)
T cd05039 157 -----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR--------MEAPEG 223 (256)
T ss_pred -----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--------CCCccC
Confidence 12335678999999988899999999999999999997 9999864432 2222222211 112333
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
.+..+.+++.+||..+|.+||++. ++...|+.
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~~ 255 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTFK-QLREQLAL 255 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCHH-HHHHHHhc
Confidence 457899999999999999999998 67777654
No 114
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.1e-36 Score=315.13 Aligned_cols=242 Identities=26% Similarity=0.452 Sum_probs=192.4
Q ss_pred eeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCchh
Q 003481 477 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQ 551 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL~ 551 (816)
.||+|+||.||+|++. ++.||+|.+..... .....|.+|+.++++++||||++++++|.. ..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 5999999999999884 88999998765432 334568999999999999999999999843 578999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccc
Q 003481 552 DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 631 (816)
Q Consensus 552 ~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 631 (816)
+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......... ..
T Consensus 82 ~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~----~~ 152 (252)
T cd05084 82 TFLRTEG--PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA----ST 152 (252)
T ss_pred HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccccccccc----cc
Confidence 9986543 45899999999999999999999987 999999999999999999999999998765432211 01
Q ss_pred cCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003481 632 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 708 (816)
Q Consensus 632 ~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 708 (816)
.....++..|+|||.+.++.++.++|||||||++|+|++ |..||..... ....+..+. ....+...+..
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 224 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV--------RLPCPELCPDA 224 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC--------CCCCcccCCHH
Confidence 112233567999999999999999999999999999998 8899864332 222222111 11233345678
Q ss_pred HHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 709 LVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 709 l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+.+|+.+||+.+|.+||++. ++.+.|+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~-~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFS-TVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHH-HHHHHHh
Confidence 99999999999999999999 5666554
No 115
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.7e-37 Score=335.93 Aligned_cols=248 Identities=25% Similarity=0.296 Sum_probs=197.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|.+...||+|+||.||++... +..||+|++..... .....+.+|+.++..++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999875 88999999976432 234468899999999999999999998844 488999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999997653 36899999999999999999999988 999999999999999999999999999876543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccc------cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCcccccc
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHR------TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSIL 694 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~ 694 (816)
... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||....... ..+... ...+
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~ 228 (330)
T cd05601 156 KMV-----NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF--QRFL 228 (330)
T ss_pred Cce-----eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC--CCcc
Confidence 311 123457999999999886 4567899999999999999999999996443321 111111 1111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
. .. .....+..+.+|+..||. +|.+||++.+.+.+
T Consensus 229 ~--~~-~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 229 K--FP-EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred C--CC-CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0 00 111245678999999998 99999999865544
No 116
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=6.8e-36 Score=318.09 Aligned_cols=251 Identities=24% Similarity=0.398 Sum_probs=199.6
Q ss_pred CCccceeeeecceEEEEEEEc-----CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003481 472 FSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 536 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------- 536 (816)
|.+.+.||+|+||.||+|.+. +..||+|.+..... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 566788999999999999874 36799999875432 234578999999999999999999998732
Q ss_pred CccceeeccCCCchhhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeec
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKS---NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 613 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DF 613 (816)
..++|+||+++|+|..++.... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 2689999999999999886532 2246899999999999999999999987 999999999999999999999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCcc
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKL 690 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~ 690 (816)
|+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||..... ....+..+..
T Consensus 158 g~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 233 (273)
T cd05035 158 GLSKKIYSGDYYR----QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR 233 (273)
T ss_pred cceeecccccccc----ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 9998765433211 1222345678999999988899999999999999999999 8899864432 2222222221
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 691 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 691 ~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
...+...+..+.+++.+||+.||.+||++. ++.+.|+.+
T Consensus 234 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-e~~~~l~~~ 272 (273)
T cd05035 234 --------LKQPEDCLDELYDLMYSCWRADPKDRPTFT-KLREVLENI 272 (273)
T ss_pred --------CCCCcCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHhh
Confidence 122334567899999999999999999999 677777654
No 117
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.6e-36 Score=316.74 Aligned_cols=244 Identities=27% Similarity=0.475 Sum_probs=196.8
Q ss_pred CCCccceeeeecceEEEEEEEcC-eEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCC
Q 003481 471 NFSESFKVGQGGFGCVYKGEMLG-RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~g-~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
+|.....||+|+||.||+|.+.+ ..||+|.+.... .....|.+|+.++.+++||||++++++|.+ ..++||||+.+
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 57778899999999999998874 469999987543 334678999999999999999999999854 47899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... ..+++..++.++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.......
T Consensus 84 ~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05113 84 GCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--- 155 (256)
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCce---
Confidence 99999986543 26899999999999999999999987 99999999999999999999999999887643321
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||..... ....+..+... ..+..
T Consensus 156 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~ 225 (256)
T cd05113 156 --TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--------YRPHL 225 (256)
T ss_pred --eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC--------CCCCC
Confidence 11223346678999999988889999999999999999999 9999964332 22223222111 11222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.+..+.+++.+||+.+|.+||++. .++..
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~~-~ll~~ 254 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTFQ-QLLSS 254 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHH-HHHHh
Confidence 457899999999999999999998 45443
No 118
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.1e-36 Score=333.40 Aligned_cols=230 Identities=25% Similarity=0.369 Sum_probs=187.8
Q ss_pred eeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccccC--CccceeeccCCC
Q 003481 477 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPNG 548 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~E~~~~g 548 (816)
.||+|+||.||+|++. +..||||++..... .....+..|..++..+ +||||+++++++.+ ..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 5999999999999886 67899999875422 2334577899998876 89999999999843 589999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 628 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 628 (816)
+|...+.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~---- 151 (321)
T cd05591 82 DLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV---- 151 (321)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCCc----
Confidence 9999886543 5889999999999999999999988 99999999999999999999999999876432221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003481 629 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+.. .+|...+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~---------~~p~~~~ 220 (321)
T cd05591 152 --TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV---------LYPVWLS 220 (321)
T ss_pred --cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------CCCCCCC
Confidence 12345699999999999988999999999999999999999999975443 2222222211 1233356
Q ss_pred HHHHHHHHHhhccCCCCCCCC
Q 003481 707 RRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs~ 727 (816)
..+.+|+.+||+.||.+||+.
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~~ 241 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLGC 241 (321)
T ss_pred HHHHHHHHHHhccCHHHcCCC
Confidence 789999999999999999944
No 119
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=8.3e-36 Score=315.81 Aligned_cols=250 Identities=32% Similarity=0.468 Sum_probs=202.9
Q ss_pred hcCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-CCccceeeccC
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLP 546 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~lV~E~~~ 546 (816)
.++|.+.++||+|+||.||+|... +..||+|.+..... ....|.+|+.++++++||||+++++++. +..++||||+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~ 83 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYME 83 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCC
Confidence 357888899999999999999875 78899999875443 3567899999999999999999999874 45899999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+++|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.........
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05067 84 NGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCcc-
Confidence 9999999865443 46899999999999999999999987 999999999999999999999999999876532211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......++..|+|||++....++.++||||||+++|+|++ |+.||..... ....+..+... ..+.
T Consensus 159 ----~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 226 (260)
T cd05067 159 ----AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM--------PRPD 226 (260)
T ss_pred ----cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC--------CCCC
Confidence 1223446788999999998899999999999999999999 9999964332 22222222111 1222
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
..+..+.+++.+||..+|++||++. .+...|+.
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~~ 259 (260)
T cd05067 227 NCPEELYELMRLCWKEKPEERPTFE-YLRSVLED 259 (260)
T ss_pred CCCHHHHHHHHHHccCChhhCCCHH-HHHHHhhc
Confidence 3456899999999999999999998 67777654
No 120
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.4e-36 Score=332.62 Aligned_cols=253 Identities=21% Similarity=0.244 Sum_probs=195.2
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE------- 536 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------- 536 (816)
..++|...+.||+|+||.||++.+. |..||+|++.... ......+.+|+.++..++||||+++++++..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999875 7899999986542 2334568899999999999999999998732
Q ss_pred -CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccc
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 615 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGl 615 (816)
..++||||+.+ +|.+.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence 36899999975 5655553 24788899999999999999999988 99999999999999999999999999
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hh------
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VS------ 686 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~------ 686 (816)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..... +.
T Consensus 170 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 242 (359)
T cd07876 170 ARTACTNF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 242 (359)
T ss_pred ccccccCc-------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 97653322 124457899999999999999999999999999999999999999644321110 00
Q ss_pred ----------------c-Cccc-----cc----cCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 687 ----------------C-GKLS-----SI----LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 687 ----------------~-~~~~-----~~----~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
. .... +. ..+.........+..+.+|+.+||..||.+|||+.+.+.+.+-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 318 (359)
T cd07876 243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318 (359)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 0 0000 00 0000001111234678999999999999999999977766543
No 121
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.3e-36 Score=316.50 Aligned_cols=243 Identities=28% Similarity=0.393 Sum_probs=200.6
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|...+.||+|+||.||+|... +..|++|.+.... ......+.+|+.+++.++||||+++++++.+ ..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999885 7899999986543 2345578899999999999999999999854 48999999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++.... ...+++..++.++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999987652 246899999999999999999999987 99999999999999999999999999987654331
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~~~~ 702 (816)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||....... ..+..+.. ...+
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~ 222 (256)
T cd08529 157 ------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF--------PPVS 222 (256)
T ss_pred ------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------CCCc
Confidence 1234468899999999999999999999999999999999999997554321 11222211 1223
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
..++..+.+++.+||+.+|++||++.+.+
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll 251 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLL 251 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHh
Confidence 34567899999999999999999999544
No 122
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.2e-36 Score=360.03 Aligned_cols=258 Identities=22% Similarity=0.300 Sum_probs=200.5
Q ss_pred HHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc----C
Q 003481 465 LQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP----E 536 (816)
Q Consensus 465 l~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~----~ 536 (816)
.....++|.+...||.|+||.||++.+. +..||+|++..... .....|..|+.+|.+|+|||||+++++|. .
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3445578999999999999999999886 77899999875433 23456889999999999999999999873 2
Q ss_pred CccceeeccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCC----CceeeCCCCCCceEecC-------
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKP----EKIVHGDLKPQNILLDS------- 604 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~----~~ivHrDIkp~NILl~~------- 604 (816)
.+||||||+++|+|.++|.... ....+++..++.|+.||+.||.|||+.++ ++||||||||+||||+.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 3789999999999999987532 23469999999999999999999998642 35999999999999964
Q ss_pred ----------CCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHhHHHHHHHHHHhCC
Q 003481 605 ----------ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGR 672 (816)
Q Consensus 605 ----------~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDVwSlGviL~elltG~ 672 (816)
.+.+||+|||++..+.... ......||+.|+|||++.. ..+++++||||||||||+|+||.
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIES-------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccc-------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 2358999999998764332 1234579999999998854 45899999999999999999999
Q ss_pred CCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 673 LPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 673 ~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.||.........+..- ....... ....+..+.+||..||..+|.+||++.+.|.+.+
T Consensus 241 ~PF~~~~~~~qli~~l--k~~p~lp----i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 241 TPFHKANNFSQLISEL--KRGPDLP----IKGKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred CCCCcCCcHHHHHHHH--hcCCCCC----cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 9997544322222110 0000000 1123568999999999999999999997665443
No 123
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.7e-36 Score=321.60 Aligned_cols=253 Identities=28% Similarity=0.442 Sum_probs=201.1
Q ss_pred CCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSL 540 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~l 540 (816)
+|...+.||+|+||.||+|... ...|++|.+..... .....+.+|+.++..++||||++++++|. +..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4777889999999999999864 25689998865443 23456889999999999999999999884 35889
Q ss_pred eeeccCCCchhhhhhhcC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCc
Q 003481 541 VYEYLPNGSLQDRLFRKS---------------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQN 599 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~N 599 (816)
|+||+.+|+|.+++.... ....+++..++.++.|++.||.|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999886421 1235889999999999999999999987 9999999999
Q ss_pred eEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCCh
Q 003481 600 ILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLA 678 (816)
Q Consensus 600 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~ 678 (816)
||++.++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|+|+| |..||...
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999865433211 11233456778999999988889999999999999999999 99999643
Q ss_pred H--HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 679 G--EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 679 ~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
. .+...+..+. ....+...+..+.+++.+||+.+|.+||++. ++...|+.+.
T Consensus 234 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~-~i~~~l~~~~ 287 (290)
T cd05045 234 APERLFNLLKTGY--------RMERPENCSEEMYNLMLTCWKQEPDKRPTFA-DISKELEKMM 287 (290)
T ss_pred CHHHHHHHHhCCC--------CCCCCCCCCHHHHHHHHHHccCCcccCCCHH-HHHHHHHHHH
Confidence 3 2222222221 1112334556899999999999999999999 7888887764
No 124
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-35 Score=314.90 Aligned_cols=245 Identities=27% Similarity=0.453 Sum_probs=196.0
Q ss_pred eeeeecceEEEEEEEc----CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC-CccceeeccCCCch
Q 003481 477 KVGQGGFGCVYKGEML----GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPNGSL 550 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~----g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~E~~~~gsL 550 (816)
.||+|+||.||+|.+. +..||+|++...... ....|.+|+.++.+++||||++++++|.. ..++||||+++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 3899999999999764 456999998765432 34568999999999999999999999854 57899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcc
Q 003481 551 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 630 (816)
Q Consensus 551 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 630 (816)
.+++.... ..+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.......... .
T Consensus 82 ~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~---~ 153 (257)
T cd05115 82 NKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY---K 153 (257)
T ss_pred HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccce---e
Confidence 99986543 46899999999999999999999987 9999999999999999999999999998654332111 1
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcCccccccCCCCCCCCHHHHH
Q 003481 631 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPTFVAR 707 (816)
Q Consensus 631 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 707 (816)
......+++.|+|||++.+..++.++|||||||++|+|++ |..||.... .+...+..+.. ...+...+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 225 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR--------LDCPAECPP 225 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC--------CCCCCCCCH
Confidence 1122334678999999988889999999999999999996 999996433 22233333321 123344567
Q ss_pred HHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 708 RLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 708 ~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.+.+++.+||..+|++||++. .+.+.|+.+
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~-~i~~~l~~~ 255 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFA-KVEERMRTY 255 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHH-HHHHHHhhh
Confidence 899999999999999999999 677777653
No 125
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.7e-36 Score=345.80 Aligned_cols=253 Identities=23% Similarity=0.317 Sum_probs=192.1
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC---------
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--------- 536 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--------- 536 (816)
.+.+|...+.||+|+||.||+|... +..||||++.... ....+|+.+|+.++||||+++++++..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999884 7899999885432 234579999999999999999887521
Q ss_pred -CccceeeccCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC-CeeEeec
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDF 613 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-~vkL~DF 613 (816)
..++||||+++ +|.+++... .....+++..+..++.||+.||.|||+.+ |+||||||+||||+.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence 14589999975 676666432 22346899999999999999999999988 99999999999998664 6999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---Hhh-cC
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVS-CG 688 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~~-~~ 688 (816)
|+|+.+.... ......||+.|+|||++.+ ..++.++|||||||+||||+||.+||........ .+. .+
T Consensus 216 Gla~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~ 288 (440)
T PTZ00036 216 GSAKNLLAGQ-------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG 288 (440)
T ss_pred ccchhccCCC-------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9998765432 1234568999999998765 4689999999999999999999999975432211 110 00
Q ss_pred c------------cccccCCC------CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 689 K------------LSSILDPL------AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 689 ~------------~~~~~d~~------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
. +..+.-+. ...+|...+..+.+|+.+||..||.+||++.+.+.+.+
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 0 00000000 01123334568999999999999999999998777655
No 126
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.2e-35 Score=315.40 Aligned_cols=253 Identities=22% Similarity=0.340 Sum_probs=203.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~ 542 (816)
++|.+.+.||.|+||.||+|+.. +..||||.+..... .....|.+|+.+++.++||||+++++++. +..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47889999999999999999874 88999998865332 23346889999999999999999999874 4588999
Q ss_pred eccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 543 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
||+++|+|.+++.... ....+++..++.++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999886432 2245788999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH----HHHHHhhcCccccccCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG----EVRRAVSCGKLSSILDPL 697 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~----~~~~~~~~~~~~~~~d~~ 697 (816)
... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .....+..... +
T Consensus 159 ~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----~- 226 (267)
T cd08228 159 KTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY-----P- 226 (267)
T ss_pred hhH------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC-----C-
Confidence 321 1234468899999999988889999999999999999999999985332 11111111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
...+...+..+.+++.+||..+|.+||++. +++..|+++.
T Consensus 227 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~-~vl~~~~~~~ 266 (267)
T cd08228 227 -PLPTEHYSEKLRELVSMCIYPDPDQRPDIG-YVHQIAKQMH 266 (267)
T ss_pred -CCChhhcCHHHHHHHHHHCCCCcccCcCHH-HHHHHHHHhc
Confidence 111234567899999999999999999999 7888887764
No 127
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.2e-36 Score=334.48 Aligned_cols=231 Identities=24% Similarity=0.312 Sum_probs=187.5
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+.||+|+||.||++.+. +..||+|++..... .....+..|+.++.++ +||||+++++++. +..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999885 78899999976432 2334577899988877 8999999999884 458899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|..++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--- 151 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--- 151 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC---
Confidence 99998886543 5889999999999999999999988 99999999999999999999999999875432211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH-----------HHHHHhhcCccccccCC
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG-----------EVRRAVSCGKLSSILDP 696 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~-----------~~~~~~~~~~~~~~~d~ 696 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .....+..+
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-------- 220 (329)
T cd05618 152 ---TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------- 220 (329)
T ss_pred ---ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--------
Confidence 1234579999999999999999999999999999999999999995211 111111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 697 LAGDWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 697 ~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
...+|...+..+.+|+.+||+.||.+||+.
T Consensus 221 -~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 221 -QIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -CCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 112344566788999999999999999985
No 128
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2e-36 Score=331.05 Aligned_cols=231 Identities=26% Similarity=0.350 Sum_probs=189.3
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCC---cccHHHHHHHHHHHhcC-CCCceeeEecccc--CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|.+. +..||||++.... ......+..|..++..+ +||||+++++++. +..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999885 6789999997643 22344577899999888 7999999999884 458999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|..++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 151 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--- 151 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCCC---
Confidence 99999886543 5899999999999999999999987 99999999999999999999999999875332221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+. ..++...
T Consensus 152 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~---------~~~~~~~ 219 (318)
T cd05570 152 ---TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE---------VRYPRWL 219 (318)
T ss_pred ---cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---------CCCCCcC
Confidence 12344689999999999999999999999999999999999999974432 222222211 1233445
Q ss_pred HHHHHHHHHHhhccCCCCCCCC
Q 003481 706 ARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
+..+.+|+.+||+.||.+||++
T Consensus 220 ~~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 220 SKEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred CHHHHHHHHHHccCCHHHcCCC
Confidence 6789999999999999999999
No 129
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.2e-36 Score=340.52 Aligned_cols=254 Identities=21% Similarity=0.270 Sum_probs=193.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~ 542 (816)
++|.+.+.||+|+||.||+++.. ++.||||++..... .....+.+|+.+|.+++||||+++++.|. +..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999875 78999999865322 23346789999999999999999999884 3588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+|..+...
T Consensus 81 E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 9999999999997643 5788889999999999999999988 999999999999999999999999998533210
Q ss_pred CCc-------------------------------------CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHH
Q 003481 623 TLY-------------------------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLII 665 (816)
Q Consensus 623 ~~~-------------------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL 665 (816)
... ...........||+.|+|||++.+..++.++|||||||+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 000 0000011235799999999999999999999999999999
Q ss_pred HHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCC---CChHHHHH
Q 003481 666 LQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVK 733 (816)
Q Consensus 666 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RP---s~~e~l~~ 733 (816)
|+|++|+.||.................... .......+..+.+|+.+|+ .+|.+|+ ++.+.+.+
T Consensus 235 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 235 YEMLVGQPPFLADTPAETQLKVINWETTLH---IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred eehhhCCCCCCCCCHHHHHHHHhccCcccc---CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999999999975543222111111100000 0111234567888888876 4999999 66654433
No 130
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.6e-36 Score=318.04 Aligned_cols=254 Identities=26% Similarity=0.361 Sum_probs=201.8
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccc
Q 003481 464 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWS 539 (816)
Q Consensus 464 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~ 539 (816)
|++.+++++.....||+|+||.||+|.+. +..|++|.+..........+.+|+.++++++|+||+++++++.. ..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34567778888889999999999999875 67899999877666666789999999999999999999999843 578
Q ss_pred ceeeccCCCchhhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC-CCCeeEeecccc
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPL--LWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFGIC 616 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~-~~~vkL~DFGla 616 (816)
+|+||+++++|.+++.... ..+ ++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.++|+|||++
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~ 156 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTS 156 (268)
T ss_pred EEEecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhh
Confidence 9999999999999987643 234 78889999999999999999987 999999999999976 679999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCC--CCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCcccccc
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV--LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSIL 694 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 694 (816)
........ ......|++.|+|||++.... ++.++||||||+++|+|++|+.||.............. .
T Consensus 157 ~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~----~ 226 (268)
T cd06624 157 KRLAGINP------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVG----M 226 (268)
T ss_pred eecccCCC------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhh----h
Confidence 76643221 122345889999999986643 78999999999999999999999964322111110000 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
......++......+.+++.+||+.+|.+||++.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 227 FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 11122345556678999999999999999999996554
No 131
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.3e-36 Score=321.48 Aligned_cols=258 Identities=27% Similarity=0.397 Sum_probs=200.5
Q ss_pred cCCCccceeeeecceEEEEEEEcC------------------eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeE
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLG------------------RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTL 530 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g------------------~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l 530 (816)
.+|.+.+.||+|+||.||++.+.+ ..||+|.+..... .....|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 578888999999999999987642 4589999876543 345578899999999999999999
Q ss_pred eccccC--CccceeeccCCCchhhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCce
Q 003481 531 LGACPE--AWSLVYEYLPNGSLQDRLFRKSN--------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI 600 (816)
Q Consensus 531 ~g~~~~--~~~lV~E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NI 600 (816)
+++|.. ..++||||+++++|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhce
Confidence 999854 58899999999999999876431 236899999999999999999999987 99999999999
Q ss_pred EecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh--CCCCCCCh
Q 003481 601 LLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT--GRLPVGLA 678 (816)
Q Consensus 601 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt--G~~Pf~~~ 678 (816)
+++.++.++|+|||+++........ .......+++.|+|||++..+.++.++|||||||++|+|++ |..||...
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYY----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred eecCCCceEEccccceeecccCcce----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999865433211 12334557789999999988889999999999999999998 77888643
Q ss_pred HH--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 679 GE--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 679 ~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
.. ........ +...-.......+...+..+.+|+.+||+.||.+||++. +|...|+
T Consensus 238 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~-el~~~L~ 295 (296)
T cd05051 238 TDQQVIENAGHF-FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFR-EIHLFLQ 295 (296)
T ss_pred ChHHHHHHHHhc-cccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHH-HHHHHhc
Confidence 22 21111111 000000011112333457899999999999999999999 5665553
No 132
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6.8e-36 Score=332.97 Aligned_cols=253 Identities=23% Similarity=0.334 Sum_probs=192.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||+|+||+||++... ++.||||++..... .....+.+|+.++.+++||||+++++.+.+ ..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47888999999999999999875 78999999975432 223467889999999999999999999854 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999997643 5889999999999999999999988 999999999999999999999999999765321
Q ss_pred CCcC---------C--------------------CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCC
Q 003481 623 TLYL---------P--------------------SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL 673 (816)
Q Consensus 623 ~~~~---------~--------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~ 673 (816)
.... + .........||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 1000 0 0001124579999999999999999999999999999999999999
Q ss_pred CCCChHH--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhc--cCCCCCCCChHHHHH
Q 003481 674 PVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCE--LYGRERPDITPSLVK 733 (816)
Q Consensus 674 Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~--~dP~~RPs~~e~l~~ 733 (816)
||..... ....+...... +..+.. ...+..+.+|+.+++. .++..||++.+.+.+
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~-~~~p~~----~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 235 PFCSETPQETYKKVMNWKET-LIFPPE----VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCHHHHHHHHHcCcCc-ccCCCc----CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 9975432 22222221111 111111 1134577788887554 233356888755443
No 133
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=302.18 Aligned_cols=253 Identities=25% Similarity=0.373 Sum_probs=211.3
Q ss_pred HHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc----c----HHHHHHHHHHHhcC-CCCceeeEeccc
Q 003481 466 QTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ----G----QLEFQQEVRVLSKL-QHPHLVTLLGAC 534 (816)
Q Consensus 466 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~----~----~~~~~~E~~il~~l-~HpnIv~l~g~~ 534 (816)
...-++|...+.||.|+.+.|-++... |..+|+|++...... . .+.-..|+.||+++ .||||+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 344567888889999999999998775 888999988543221 1 23456899999998 699999999999
Q ss_pred cCC--ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEee
Q 003481 535 PEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICD 612 (816)
Q Consensus 535 ~~~--~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~D 612 (816)
+.. .++|+|.|+.|.|.|+|...- .++++...+|+.|+..|+.|||..+ ||||||||+|||+|+|.++||+|
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence 654 678999999999999997654 5889999999999999999999988 99999999999999999999999
Q ss_pred cccceeccCCCCcCCCccccCCCCCCCCCCCcccccc------CCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHH
Q 003481 613 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT------GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRA 684 (816)
Q Consensus 613 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~ 684 (816)
||+++.+.++. .-...+|||+|+|||.+.. ..|+..+|+|++|||+|.|+.|.+||-...++ ...
T Consensus 167 FGFa~~l~~Ge-------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ 239 (411)
T KOG0599|consen 167 FGFACQLEPGE-------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRM 239 (411)
T ss_pred cceeeccCCch-------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHH
Confidence 99999988766 3467889999999997743 46888999999999999999999999766553 345
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 685 VSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 685 ~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+..|++.- ..++|. +.+....+||.+||+.||.+|.|..+.|.+.+=
T Consensus 240 ImeGkyqF----~speWa-dis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 240 IMEGKYQF----RSPEWA-DISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred HHhccccc----CCcchh-hccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 66666542 233443 467789999999999999999999998887763
No 134
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1e-35 Score=314.56 Aligned_cols=244 Identities=28% Similarity=0.468 Sum_probs=195.2
Q ss_pred CCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
+|.+.+.||+|+||.||+|.+. +..+|+|.+..... ....|.+|+.++.+++||||+++++++.+ ..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4677788999999999999886 55799999864432 34568899999999999999999998844 47899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
++|.+++.... ..+++..++.|+.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-- 156 (256)
T cd05059 84 GCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-- 156 (256)
T ss_pred CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccc--
Confidence 99999987544 36899999999999999999999988 999999999999999999999999999866432211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
......++..|+|||++.+..++.++||||||+++|+|++ |..||..... ....+..+. . ...+..
T Consensus 157 ---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~---~~~~~~ 225 (256)
T cd05059 157 ---SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY-----R---LYRPKL 225 (256)
T ss_pred ---ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC-----c---CCCCCC
Confidence 1122234568999999998899999999999999999999 8999964332 222222211 1 112233
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.+..+.+|+.+||..+|.+||++.+ ++..
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~-~l~~ 254 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKK-LLSQ 254 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHH-HHHH
Confidence 5678999999999999999999994 4443
No 135
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.7e-35 Score=313.55 Aligned_cols=249 Identities=31% Similarity=0.436 Sum_probs=200.7
Q ss_pred cCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC-CccceeeccCC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPN 547 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~E~~~~ 547 (816)
++|.+...||.|+||.||+|.+. +..||+|.+.... .....|.+|+.++++++|||++++++++.. ..++||||+.+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence 45788889999999999999886 4579999886543 234578899999999999999999998844 47899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-- 158 (260)
T cd05069 85 GSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-- 158 (260)
T ss_pred CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccc--
Confidence 99999997643 245899999999999999999999987 999999999999999999999999999876433211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
......++..|+|||+..+..++.++|||||||++|+|+| |..||..... ....+..+. ....+..
T Consensus 159 ---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~ 227 (260)
T cd05069 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY--------RMPCPQG 227 (260)
T ss_pred ---ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------CCCCCcc
Confidence 1123346778999999988899999999999999999999 8999964332 112221111 1112334
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
.+..+.+++.+||..+|.+||++. .+.+.|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 259 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFE-YIQSFLED 259 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHH-HHHHHHhc
Confidence 567899999999999999999998 67777763
No 136
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.9e-36 Score=322.89 Aligned_cols=258 Identities=25% Similarity=0.405 Sum_probs=196.8
Q ss_pred cCCCccceeeeecceEEEEEEEcC----------------eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLG----------------RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLG 532 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g----------------~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g 532 (816)
++|.+.+.||+|+||.||++...+ ..||+|.+..... .....|.+|++++.+++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 478888999999999999987632 3589999876532 23456899999999999999999999
Q ss_pred ccc--CCccceeeccCCCchhhhhhhcC---------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceE
Q 003481 533 ACP--EAWSLVYEYLPNGSLQDRLFRKS---------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNIL 601 (816)
Q Consensus 533 ~~~--~~~~lV~E~~~~gsL~~~l~~~~---------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NIL 601 (816)
++. +..++||||+++++|.+++.... ....+++..++.++.|++.||.|||+.+ ++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 984 45889999999999999986532 1134789999999999999999999987 999999999999
Q ss_pred ecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh--CCCCCCChH
Q 003481 602 LDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT--GRLPVGLAG 679 (816)
Q Consensus 602 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt--G~~Pf~~~~ 679 (816)
++.++.+||+|||++......... .......++..|+|||++..+.++.++|||||||++|+|++ |..||....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EcCCCcEEecccccccccccCcce----eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 999999999999999865433211 12233456788999999988899999999999999999998 667886432
Q ss_pred H--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 680 E--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 680 ~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
. ....... .............+...+..+.+|+.+||+.+|.+||++. .+.+.|+
T Consensus 238 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~-~i~~~l~ 294 (295)
T cd05097 238 DEQVIENTGE-FFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFN-KIHHFLR 294 (295)
T ss_pred hHHHHHHHHH-hhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHh
Confidence 2 1111100 0000000000111223456899999999999999999998 6666654
No 137
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2e-36 Score=337.90 Aligned_cols=247 Identities=23% Similarity=0.306 Sum_probs=196.6
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
..++|...+.||+|+||.||+++.. +..||+|++..... .....+.+|+.++..++||||+++++++.+ ..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3467889999999999999999885 78999999865322 233457789999999999999999998854 4789
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
||||+++|+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999988543 4778889999999999999999987 9999999999999999999999999998764
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccC----CCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCcccccc
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRTG----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSIL 694 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~ 694 (816)
.... .......||+.|+|||++.+. .++.++|||||||+||||++|+.||...... ...+..+.. .
T Consensus 194 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-~-- 265 (370)
T cd05596 194 ANGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN-S-- 265 (370)
T ss_pred CCCc-----ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-c--
Confidence 3321 122345799999999988643 4789999999999999999999999754432 122211110 0
Q ss_pred CCCCCCCCH--HHHHHHHHHHHHhhccCCCC--CCCChHHHHH
Q 003481 695 DPLAGDWPT--FVARRLVDLGLQCCELYGRE--RPDITPSLVK 733 (816)
Q Consensus 695 d~~~~~~~~--~~~~~l~~Li~~cl~~dP~~--RPs~~e~l~~ 733 (816)
..+|. ..+..+.+|+.+||+.+|.+ ||++.+.+.+
T Consensus 266 ----~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 266 ----LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ----CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 11121 35678999999999999988 9999865544
No 138
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.7e-36 Score=337.92 Aligned_cols=252 Identities=22% Similarity=0.276 Sum_probs=192.8
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|.+.+.||.|+||.||++... ++.||||++..... .....+.+|+.++.+++||||++++++|.+ ..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47888999999999999999875 88999999865422 233468899999999999999999999854 489999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999986543 5888999999999999999999988 999999999999999999999999999643211
Q ss_pred CCc------------CCC-----------------------------ccccCCCCCCCCCCCccccccCCCCcchhHhHH
Q 003481 623 TLY------------LPS-----------------------------FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSF 661 (816)
Q Consensus 623 ~~~------------~~~-----------------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSl 661 (816)
... ... ........||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 000 000012469999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCC---CCChHHHHH
Q 003481 662 GLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRER---PDITPSLVK 733 (816)
Q Consensus 662 GviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~R---Ps~~e~l~~ 733 (816)
||+||||+||.+||....... ..+.... ..+.-+ + ....+..+.+|+.+||. +|.+| |++.+.+.+
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p---~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHETYRKIINWR-ETLYFP---D-DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHccC-CccCCC---C-CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999999999996543321 1111110 000001 1 11245678999999997 77776 477755544
No 139
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-36 Score=333.30 Aligned_cols=232 Identities=23% Similarity=0.301 Sum_probs=188.6
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|... +..||+|++..... .....+.+|+.++.++ +||||+++++++. +..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999885 78899999976432 2334578899999888 6999999999884 358899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|..++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--- 151 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD--- 151 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCCC---
Confidence 99998886543 5899999999999999999999987 99999999999999999999999999875322111
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH---------HHHHHhhcCccccccCCCC
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG---------EVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~---------~~~~~~~~~~~~~~~d~~~ 698 (816)
......||+.|+|||++.+..++.++|||||||+||+|++|..||.... .....+.. ..
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---------~~ 219 (327)
T cd05617 152 ---TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE---------KP 219 (327)
T ss_pred ---ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh---------CC
Confidence 1234579999999999999999999999999999999999999995211 11111111 11
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
..+|...+..+.+++.+||+.||.+||++.
T Consensus 220 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 220 IRIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 123444567889999999999999999864
No 140
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.3e-36 Score=339.05 Aligned_cols=246 Identities=21% Similarity=0.270 Sum_probs=189.3
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
+|...+.||+|+||.||+|+.. +..||+|++..... .....+.+|+.++.+++||||++++++|.+ ..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999885 78899999875432 223468899999999999999999999854 4899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++|+|.+++.+.. .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999986643 5788899999999999999999988 9999999999999999999999999986432100
Q ss_pred Cc-----------------------------------------CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHH
Q 003481 624 LY-----------------------------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFG 662 (816)
Q Consensus 624 ~~-----------------------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlG 662 (816)
.. ...........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 00 0000011235799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 003481 663 LIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 663 viL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs 726 (816)
|+||||++|++||..................+ ........+..+.+++.+|+ .+|.+|++
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---~~p~~~~~s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQTSL---HIPPQAKLSPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc---CCCCcccCCHHHHHHHHHHc-cCHhHcCC
Confidence 99999999999997544322211111110000 00111234567888888876 49999998
No 141
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.4e-35 Score=315.83 Aligned_cols=252 Identities=25% Similarity=0.401 Sum_probs=202.9
Q ss_pred cCCCccceeeeecceEEEEEEEcC-----eEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC-Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLG-----RTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g-----~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~ 542 (816)
++|...+.||+|+||.||+|.+.+ ..|+||...... ......|.+|+.++.+++||||++++++|.+ ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~ 85 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM 85 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence 457788899999999999998742 368999886654 3345578999999999999999999998854 578999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... ..+++..++.++.+++.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 86 ELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccc
Confidence 9999999999996543 35899999999999999999999987 999999999999999999999999999876543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHHHH--HHhhcCccccccCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVR--RAVSCGKLSSILDPLAG 699 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~ 699 (816)
... ......+++.|+|||.+....++.++||||||+++|+|++ |..||....... ..+..+...
T Consensus 161 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-------- 227 (270)
T cd05056 161 SYY-----KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL-------- 227 (270)
T ss_pred cce-----ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC--------
Confidence 211 1223345678999999988889999999999999999996 999996544321 222222111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
..+...+..+.+++.+||..+|.+||++. .+...|+.+..
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~-~~~~~l~~~~~ 267 (270)
T cd05056 228 PMPPNCPPTLYSLMTKCWAYDPSKRPRFT-ELKAQLSDILQ 267 (270)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHHh
Confidence 12234456899999999999999999998 67778777643
No 142
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-35 Score=319.13 Aligned_cols=251 Identities=27% Similarity=0.431 Sum_probs=200.1
Q ss_pred cCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
.+|....+||+|+||.||++... +..+|+|.+..........|.+|+.++..++||||+++++++.+ ..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 35677789999999999999642 56799999876665566789999999999999999999998853 4789
Q ss_pred eeeccCCCchhhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 541 VYEYLPNGSLQDRLFRKSN------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
||||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999875431 135889999999999999999999987 9999999999999999999
Q ss_pred eEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHHH--HHHh
Q 003481 609 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAV 685 (816)
Q Consensus 609 kL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~ 685 (816)
||+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |.+||...... ....
T Consensus 162 kL~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDYY----RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred EECCCCceeEcCCCcee----ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 99999999866432211 11233446788999999998999999999999999999998 99998543322 2222
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 686 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 686 ~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
..+.. ...+...+..+.+|+.+||+.||.+||++. +|.+.|+
T Consensus 238 ~~~~~--------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~-~l~~~l~ 279 (280)
T cd05092 238 TQGRE--------LERPRTCPPEVYAIMQGCWQREPQQRMVIK-DIHSRLQ 279 (280)
T ss_pred HcCcc--------CCCCCCCCHHHHHHHHHHccCChhhCCCHH-HHHHHHh
Confidence 22211 111223456789999999999999999999 5666554
No 143
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.3e-35 Score=315.37 Aligned_cols=249 Identities=26% Similarity=0.428 Sum_probs=198.6
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc---------HHHHHHHHHHHhcCCCCceeeEecccc--CC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---------QLEFQQEVRVLSKLQHPHLVTLLGACP--EA 537 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~---------~~~~~~E~~il~~l~HpnIv~l~g~~~--~~ 537 (816)
+|.....||.|+||.||+|.+. +..||+|.+....... ...+.+|+.++++++||||+++++++. +.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677789999999999999874 7889999886543322 245789999999999999999999984 45
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.++||||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence 789999999999999996543 5888999999999999999999987 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCC
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPL 697 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~ 697 (816)
...................|+..|+|||++.+..++.++|||||||++|+|++|+.||.............. ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~ 228 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE------NA 228 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc------cC
Confidence 775322111111112234588999999999888899999999999999999999999975544322221111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
....+...+..+.+++.+||+.+|.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 262 (267)
T cd06628 229 SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELL 262 (267)
T ss_pred CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHh
Confidence 1223344567899999999999999999998544
No 144
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.3e-36 Score=322.97 Aligned_cols=250 Identities=28% Similarity=0.430 Sum_probs=198.0
Q ss_pred CCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEecccc--CCccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSL 540 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~l 540 (816)
+|.+.+.||.|+||.||+|.+. +..||||++...... ....|.+|+.++..++||||+++++++. +..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3566678999999999999864 367999999755432 2356889999999999999999999984 35789
Q ss_pred eeeccCCCchhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCC
Q 003481 541 VYEYLPNGSLQDRLFRKS-------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 607 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~ 607 (816)
++||+++++|.+++.... ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 999999999999985321 1235889999999999999999999987 999999999999999999
Q ss_pred eeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHH
Q 003481 608 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRA 684 (816)
Q Consensus 608 vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~ 684 (816)
+||+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||++ |..||..... ....
T Consensus 163 ~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 163 VKISDLGLFREVYAADYY----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred eEecccccccccccchhe----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999998866433211 11234456789999999988889999999999999999998 8888864322 2233
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 685 VSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 685 ~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+..+.. ...+...+..+.+|+.+||+.+|.+||++. ++...|+
T Consensus 239 i~~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~-~i~~~l~ 281 (283)
T cd05091 239 IRNRQV--------LPCPDDCPAWVYTLMLECWNEFPSRRPRFK-DIHSRLR 281 (283)
T ss_pred HHcCCc--------CCCCCCCCHHHHHHHHHHhCCCcccCCCHH-HHHHHhh
Confidence 333222 123344566789999999999999999999 5666654
No 145
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=8.4e-36 Score=320.76 Aligned_cols=243 Identities=24% Similarity=0.317 Sum_probs=195.0
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
|+..+.||.|+||+||+|.+. ++.||+|.+...... ....+.+|+.+|..++|+||+++++++. +..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667788999999999999885 789999998654332 2345778999999999999999998874 357899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999988865432 46999999999999999999999987 9999999999999999999999999987654322
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~~~~ 702 (816)
......|++.|+|||++.+..++.++|||||||++|+|++|..||....... ..+. ..+... ...++
T Consensus 157 ------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~-~~~~~~----~~~~~ 225 (285)
T cd05632 157 ------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVD-RRVLET----EEVYS 225 (285)
T ss_pred ------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-Hhhhcc----ccccC
Confidence 1234468999999999988899999999999999999999999997543211 1111 111111 11233
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPS 730 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~ 730 (816)
...+..+.+|+..||+.||.+||++.+.
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~ 253 (285)
T cd05632 226 AKFSEEAKSICKMLLTKDPKQRLGCQEE 253 (285)
T ss_pred ccCCHHHHHHHHHHccCCHhHcCCCccc
Confidence 4456678999999999999999996533
No 146
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.9e-36 Score=331.47 Aligned_cols=240 Identities=27% Similarity=0.341 Sum_probs=189.9
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHH-HHhcCCCCceeeEecccc--CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVR-VLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~-il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|++. +..||+|++..... .....+..|.. ++..++||||+++++++. +..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999885 78999999865432 22334555554 578899999999999884 358899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|...+.... .+++..+..|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---- 150 (321)
T cd05603 81 GELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE---- 150 (321)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC----
Confidence 99998886543 5788889999999999999999987 9999999999999999999999999987532221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+. ....+..+. ..++...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~---------~~~~~~~ 219 (321)
T cd05603 151 --ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP---------LQLPGGK 219 (321)
T ss_pred --CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC---------CCCCCCC
Confidence 122345689999999999988999999999999999999999999965432 222221111 1233345
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+..+.+++.+||+.+|.+||+....+.+.++
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~ 250 (321)
T cd05603 220 TVAACDLLVGLLHKDQRRRLGAKADFLEIKN 250 (321)
T ss_pred CHHHHHHHHHHccCCHhhcCCCCCCHHHHhC
Confidence 6689999999999999999998655554443
No 147
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.5e-35 Score=313.26 Aligned_cols=245 Identities=30% Similarity=0.512 Sum_probs=197.7
Q ss_pred ceeeeecceEEEEEEEc--C---eEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEecccc-CCccceeeccCCC
Q 003481 476 FKVGQGGFGCVYKGEML--G---RTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLPNG 548 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g---~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~lV~E~~~~g 548 (816)
++||+|+||.||+|.+. + ..||+|.+...... ....+.+|+.+++.+.||||+++++++. +..++||||+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 36999999999999874 2 67999998766543 4457899999999999999999999885 4578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 628 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 628 (816)
+|.+++.... .+++..++.++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~-- 152 (257)
T cd05060 81 PLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY-- 152 (257)
T ss_pred cHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCccc--
Confidence 9999997654 5899999999999999999999987 9999999999999999999999999998765433211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 629 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+. +...+..+.. ...+...
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~ 223 (257)
T cd05060 153 -RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER--------LPRPEEC 223 (257)
T ss_pred -ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc--------CCCCCCC
Confidence 11122234568999999998899999999999999999998 9999964332 2222322211 1123345
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
+..+.+++.+||..+|.+||++. .|...|+.+
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~-~l~~~l~~~ 255 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFS-ELESTFRRD 255 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHH-HHHHHHHhc
Confidence 56899999999999999999999 777777754
No 148
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.8e-35 Score=313.19 Aligned_cols=248 Identities=25% Similarity=0.347 Sum_probs=199.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc-----cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-----GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
++|...+.||.|++|.||++... +..||+|.+...... ....+.+|+.++.+++||||+++++++.+ ..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57899999999999999999874 789999998654321 23468899999999999999999999844 5889
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
|+||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999886543 5888999999999999999999988 9999999999999999999999999998654
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCC
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~ 700 (816)
...... .......|+..|+|||++.+..++.++||||||+++|+|++|+.||.............. ......
T Consensus 156 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-----~~~~~~ 227 (263)
T cd06625 156 TICSSG---TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-----QPTNPQ 227 (263)
T ss_pred cccccc---ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-----cCCCCC
Confidence 322110 011345688899999999998899999999999999999999999965433222111110 111123
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.+...+..+.+++.+||..+|.+||++.+.+
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 258 (263)
T cd06625 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELL 258 (263)
T ss_pred CCccCCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 4445667899999999999999999998544
No 149
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-35 Score=321.81 Aligned_cols=249 Identities=25% Similarity=0.385 Sum_probs=202.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
.+|...+.||.|+||.||+|... +..|++|.+..........+.+|+.++..++||||+++++.|. ...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 47888899999999999999874 7899999998766666677899999999999999999999874 4589999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++.. ..+++.++..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 100 ~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~- 171 (296)
T cd06654 100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (296)
T ss_pred CCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc-
Confidence 99999998854 24789999999999999999999987 99999999999999999999999999876543221
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||................ .+ ....+...
T Consensus 172 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~---~~-~~~~~~~~ 242 (296)
T cd06654 172 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG---TP-ELQNPEKL 242 (296)
T ss_pred -----ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCC---CC-CCCCcccc
Confidence 1234468899999999988889999999999999999999999996544322211110000 00 11223446
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+..+.+|+.+||..+|.+||++.+.+.+.+
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~eil~~~~ 272 (296)
T cd06654 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272 (296)
T ss_pred CHHHHHHHHHHCcCCcccCcCHHHHhhChh
Confidence 678999999999999999999996665443
No 150
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8.1e-36 Score=321.63 Aligned_cols=256 Identities=28% Similarity=0.449 Sum_probs=203.2
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC-
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE- 536 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~- 536 (816)
...++|...+.||+|+||.||++... ...||+|.+..... .....+.+|+.++.++ +||||++++++|..
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34457888899999999999999864 25799999875432 3345688999999999 89999999999844
Q ss_pred -CccceeeccCCCchhhhhhhc-------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRK-------------SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL 602 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl 602 (816)
..++||||+++|+|.+++... .....+++..++.++.|++.||.|||+.+ |+||||||+|||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence 478999999999999998643 12346899999999999999999999987 9999999999999
Q ss_pred cCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH-
Q 003481 603 DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE- 680 (816)
Q Consensus 603 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~- 680 (816)
+.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYY----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred cCCCeEEeCccccccccccccce----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 99999999999999876543211 11223345678999999988899999999999999999998 9999864332
Q ss_pred -HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 681 -VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 681 -~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
....+..+.. ...+...+..+.+|+.+||..+|.+|||+. +++..|+.+
T Consensus 242 ~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-eil~~l~~~ 291 (293)
T cd05053 242 ELFKLLKEGYR--------MEKPQNCTQELYHLMRDCWHEVPSQRPTFK-QLVEDLDRM 291 (293)
T ss_pred HHHHHHHcCCc--------CCCCCCCCHHHHHHHHHHcccCcccCcCHH-HHHHHHHHh
Confidence 2232222211 122334556899999999999999999999 677777654
No 151
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.4e-35 Score=320.82 Aligned_cols=252 Identities=28% Similarity=0.440 Sum_probs=197.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--C--eEEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--G--RTVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g--~~vAiK~l~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV 541 (816)
++|.+...||+|+||.||+|.+. + ..+++|.++... ......|.+|+.++.++ +||||+++++++.+ ..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 46888899999999999999875 3 347888876432 23345688999999999 79999999999854 47899
Q ss_pred eeccCCCchhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 542 YEYLPNGSLQDRLFRKS-------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
+||+++|+|.+++.... ....+++..++.|+.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999986532 1235889999999999999999999987 9999999999999999999
Q ss_pred eEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHh
Q 003481 609 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAV 685 (816)
Q Consensus 609 kL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~ 685 (816)
||+|||++....... .......+..|+|||++....++.++|||||||++|+|++ |..||..... ....+
T Consensus 159 kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~ 231 (297)
T cd05089 159 KIADFGLSRGEEVYV-------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL 231 (297)
T ss_pred EECCcCCCcccccee-------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999986432111 1122233567999999988889999999999999999998 9999964332 22222
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 686 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 686 ~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
..+. ....+..++..+.+|+.+||+.+|.+||++. .++..|+.+..
T Consensus 232 ~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~~~~ 277 (297)
T cd05089 232 PQGY--------RMEKPRNCDDEVYELMRQCWRDRPYERPPFA-QISVQLSRMLE 277 (297)
T ss_pred hcCC--------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHHH
Confidence 2111 1112334556899999999999999999999 56666766654
No 152
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-35 Score=319.49 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=190.5
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcC---CCCceeeEeccccC-------
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKL---QHPHLVTLLGACPE------- 536 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l---~HpnIv~l~g~~~~------- 536 (816)
+|...+.||+|+||.||+|.+. ++.||+|.+...... ....+.+|+.++..+ +||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999885 789999998754322 223456777777665 79999999998732
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
..++||||+.+ +|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence 26899999974 88888765432 45899999999999999999999988 999999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---Hhhc-C----
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSC-G---- 688 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~~~-~---- 688 (816)
....... ......||+.|+|||++.+..++.++|||||||++|+|++|++||........ .... +
T Consensus 156 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 156 RIYSCQM-------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228 (288)
T ss_pred ccccCcc-------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCCh
Confidence 8764322 12345689999999999888999999999999999999999999964332211 1100 0
Q ss_pred -cccc-------ccCCCC----CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 689 -KLSS-------ILDPLA----GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 689 -~~~~-------~~d~~~----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.+.. .+.+.. .......+..+.+|+.+||+.||.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 0000 000000 011123456789999999999999999998655
No 153
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.3e-35 Score=312.92 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=204.1
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||.|+||.||+|... |..||+|.++.... .....+.+|+.++++++|+||+++++++.+ ..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 67899999999999999999885 88999998864322 234578899999999999999999998843 478999
Q ss_pred eccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 543 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
||+++|+|.+++.... ....+++..++.++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999886532 2345899999999999999999999988 99999999999999999999999999887643
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH----HHHHhhcCccccccCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE----VRRAVSCGKLSSILDPL 697 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~----~~~~~~~~~~~~~~d~~ 697 (816)
... ......+++.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..+..
T Consensus 159 ~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------- 225 (267)
T cd08224 159 KTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY------- 225 (267)
T ss_pred CCc------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC-------
Confidence 321 12334688999999999888899999999999999999999999953321 1111111211
Q ss_pred CCCCCH-HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 698 AGDWPT-FVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 698 ~~~~~~-~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
...+. ..+..+.+++.+||..+|.+||++. .+...|..+
T Consensus 226 -~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~-~il~~~~~~ 265 (267)
T cd08224 226 -PPLPADHYSEELRDLVSRCINPDPEKRPDIS-YVLQVAKEM 265 (267)
T ss_pred -CCCChhhcCHHHHHHHHHHcCCCcccCCCHH-HHHHHHHHh
Confidence 11222 4566899999999999999999999 677777765
No 154
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-38 Score=306.34 Aligned_cols=247 Identities=24% Similarity=0.371 Sum_probs=203.6
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++.|++...||+|.|+.||++... |+.+|+|+++... ..+.+.+.+|+.|...|+||||++|.....+ ..|||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 456777788999999999998774 8889999875442 3356678899999999999999999998744 378999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC---CCCeeEeecccceec
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLV 619 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vkL~DFGla~~~ 619 (816)
|+|.|++|..-|..+. .+++..+-.++.||+.||.|+|.++ |||||+||.|+||.. ..-+||+|||+|..+
T Consensus 90 e~m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIVARE---FYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999976665542 4677788899999999999999998 999999999999954 345999999999998
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCCh--HHHHHHhhcCccccccCCC
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA--GEVRRAVSCGKLSSILDPL 697 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~--~~~~~~~~~~~~~~~~d~~ 697 (816)
..+. .....+|||+|||||++...+|+..+|||+.|||||-|+.|.+||... ..+.+.+..|.+. -.
T Consensus 164 ~~g~-------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd----~~ 232 (355)
T KOG0033|consen 164 NDGE-------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD----YP 232 (355)
T ss_pred CCcc-------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC----CC
Confidence 8433 346778999999999999999999999999999999999999999753 3455556555442 22
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
...|+ .+++...+|+.+||..||.+|.|+.+.|.+
T Consensus 233 ~~~w~-~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 233 SPEWD-TVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CcccC-cCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 23444 467789999999999999999999876644
No 155
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.2e-35 Score=317.37 Aligned_cols=252 Identities=30% Similarity=0.472 Sum_probs=201.2
Q ss_pred hcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cc
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AW 538 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~ 538 (816)
.++|.+...||+|+||.||+|.+. +..||+|.+..... .....+.+|+.++..++||||+++++++.. ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357888899999999999999875 26799999865432 334568899999999999999999999843 58
Q ss_pred cceeeccCCCchhhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEe
Q 003481 539 SLVYEYLPNGSLQDRLFRKSN-------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKIC 611 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~ 611 (816)
++||||+++|+|.+++..... ...++|..++.|+.|++.||.|||+.+ |+||||||+|||++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 899999999999999875432 234789999999999999999999987 9999999999999999999999
Q ss_pred ecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcC
Q 003481 612 DFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCG 688 (816)
Q Consensus 612 DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~ 688 (816)
|||+++........ .......++..|+|||.+.++.++.++|||||||++|||+| |..||.... .....+..+
T Consensus 162 dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~ 237 (277)
T cd05032 162 DFGMTRDIYETDYY----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG 237 (277)
T ss_pred CcccchhhccCccc----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC
Confidence 99999876543321 12234457889999999988889999999999999999998 999986433 222323222
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 689 KLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 689 ~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
.. ...|...+..+.+++.+||+.+|.+|||+. .+...|+
T Consensus 238 ~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~ 276 (277)
T cd05032 238 GH--------LDLPENCPDKLLELMRMCWQYNPKMRPTFL-EIVSSLK 276 (277)
T ss_pred CC--------CCCCCCCCHHHHHHHHHHcCCChhhCCCHH-HHHHHhc
Confidence 21 122333467899999999999999999999 5555553
No 156
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.2e-36 Score=331.66 Aligned_cols=242 Identities=25% Similarity=0.313 Sum_probs=190.9
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHH-HHhcCCCCceeeEecccc--CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVR-VLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~-il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+.||+|+||.||++++. +..||+|++..... .....+..|.. ++..++||||+++++++. +..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999885 67899999865422 22233444444 567889999999999884 458999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~--- 151 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG--- 151 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCCC---
Confidence 99999886543 4778888999999999999999988 99999999999999999999999999875432221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ..+.... ...+...
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~---------~~~~~~~ 219 (325)
T cd05602 152 ---TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP---------LQLKPNI 219 (325)
T ss_pred ---CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC---------cCCCCCC
Confidence 2245579999999999999999999999999999999999999996543321 2221111 1122345
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
+..+.+|+.+||+.||.+||++.+.+.+.++..
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~ 252 (325)
T cd05602 220 TNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHI 252 (325)
T ss_pred CHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCc
Confidence 668999999999999999999986665555543
No 157
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7.8e-36 Score=333.58 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=193.5
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------Ccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------AWS 539 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------~~~ 539 (816)
+|+..+.||+|+||.||++.+. ++.||||.+.... ......+.+|+.++..++||||+++++++.. ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999874 8999999986532 2334568899999999999999999998842 468
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
+|+||+. ++|.+.+... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 5777777543 35899999999999999999999988 999999999999999999999999999875
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhc--C--c---
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSC--G--K--- 689 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~--~--~--- 689 (816)
..... .......+|+.|+|||++.+. .++.++|||||||++|||++|+.||...+..... +.. | .
T Consensus 154 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 154 EPDES-----KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred ccCcc-----ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 43321 122345689999999988764 5799999999999999999999999644322110 000 0 0
Q ss_pred -----------c-ccccCCC----CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 690 -----------L-SSILDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 690 -----------~-~~~~d~~----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
+ .....+. ........+..+.+|+.+||+.||.+||++.+.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 0 0000000 0011122356789999999999999999999766554
No 158
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.8e-36 Score=332.40 Aligned_cols=240 Identities=27% Similarity=0.325 Sum_probs=190.3
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHH-HHhcCCCCceeeEecccc--CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVR-VLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~-il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+.||+|+||.||+++.. |..||+|++..... .....+..|.. +++.++||||+++++++. +..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999875 88999999865422 22344556655 467789999999999884 458999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|..++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---- 150 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS---- 150 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC----
Confidence 99998886543 5889999999999999999999988 9999999999999999999999999987543221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+. ....+..+.+ ..+...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~---------~~~~~~ 219 (325)
T cd05604 151 --DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL---------VLRPGA 219 (325)
T ss_pred --CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc---------cCCCCC
Confidence 122455799999999999999999999999999999999999999975432 2222222211 112234
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+..+.+++.+||+.+|.+||++.+.+.+.++
T Consensus 220 ~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~ 250 (325)
T cd05604 220 SLTAWSILEELLEKDRQRRLGAKEDFLEIQE 250 (325)
T ss_pred CHHHHHHHHHHhccCHHhcCCCCCCHHHHhc
Confidence 5678899999999999999999755544443
No 159
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.5e-36 Score=345.50 Aligned_cols=255 Identities=22% Similarity=0.300 Sum_probs=190.5
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC------CCceeeEecccc
Q 003481 464 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ------HPHLVTLLGACP 535 (816)
Q Consensus 464 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~g~~~ 535 (816)
++...+++|.+.++||+|+||.||+|.+. +..||||++.... .....+..|+.++..++ |+++++++++|.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 44456789999999999999999999875 7889999986432 22334556777776665 456888888874
Q ss_pred C---CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCceeeCCCCCCceEecCCC-----
Q 003481 536 E---AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS-KPEKIVHGDLKPQNILLDSEL----- 606 (816)
Q Consensus 536 ~---~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~ivHrDIkp~NILl~~~~----- 606 (816)
. ..++||+++ +++|.+++.... .+++..+..|+.||+.||.|||+. + ||||||||+||||+.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccc
Confidence 3 478999988 778888886543 589999999999999999999984 6 99999999999998765
Q ss_pred -----------CeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCC
Q 003481 607 -----------SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 675 (816)
Q Consensus 607 -----------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf 675 (816)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||+||||++|++||
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~---------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf 345 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERH---------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLY 345 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcc---------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 499999998754322 224567999999999999999999999999999999999999999
Q ss_pred CChHHHHHH--hh--cCccc-------------cccC------CCC-----------CCC-CHHHHHHHHHHHHHhhccC
Q 003481 676 GLAGEVRRA--VS--CGKLS-------------SILD------PLA-----------GDW-PTFVARRLVDLGLQCCELY 720 (816)
Q Consensus 676 ~~~~~~~~~--~~--~~~~~-------------~~~d------~~~-----------~~~-~~~~~~~l~~Li~~cl~~d 720 (816)
...+..... +. .|.+. .+++ +.. ..+ .......+.+||.+||++|
T Consensus 346 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 425 (467)
T PTZ00284 346 DTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYD 425 (467)
T ss_pred CCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcC
Confidence 654322111 00 01000 0000 000 000 0012356789999999999
Q ss_pred CCCCCCChHHHHHHH
Q 003481 721 GRERPDITPSLVKEL 735 (816)
Q Consensus 721 P~~RPs~~e~l~~~L 735 (816)
|.+||++.+.|.|.+
T Consensus 426 P~~R~ta~e~L~Hp~ 440 (467)
T PTZ00284 426 RQKRLNARQMTTHPY 440 (467)
T ss_pred hhhCCCHHHHhcCcc
Confidence 999999997775554
No 160
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.3e-36 Score=324.18 Aligned_cols=254 Identities=21% Similarity=0.314 Sum_probs=194.5
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
++|...+.||+|+||.||+|++. +..||+|.+...... ....+.+|+.++.+++||||+++++++. +..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888999999999999999875 788999998755432 2345778999999999999999999984 458899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++ +|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 86 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 975 7888776543 35788999999999999999999987 99999999999999999999999999976543221
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH--Hhhc--Cc-----cccc-
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVSC--GK-----LSSI- 693 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~--~~~~--~~-----~~~~- 693 (816)
......+|+.|+|||++.+ ..++.++|||||||++|+|+||++||...+.... .+.. +. +..+
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 160 ------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred ------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 1234467899999998764 4689999999999999999999999964332111 0000 00 0000
Q ss_pred -------cC-CCC-----CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 694 -------LD-PLA-----GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 694 -------~d-~~~-----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+ +.. .......+..+.+|+.+||+.||.+|||+.+.+.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 00 000 0011134567899999999999999999997665444
No 161
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.3e-35 Score=318.63 Aligned_cols=260 Identities=24% Similarity=0.322 Sum_probs=204.8
Q ss_pred cCHHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEecccc-
Q 003481 460 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACP- 535 (816)
Q Consensus 460 ~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~- 535 (816)
+.++.+..++++|.+...||+|+||.||++.+. ++.||+|++.... .....+.+|+.++..+ +||||++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 556778888999999999999999999999885 7899999886532 2235688899999999 6999999999872
Q ss_pred ------CCccceeeccCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 536 ------EAWSLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 536 ------~~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
+..++||||+++++|.+++... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 2378999999999999987643 22346889999999999999999999987 9999999999999999999
Q ss_pred eEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-----CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH
Q 003481 609 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR 683 (816)
Q Consensus 609 kL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~ 683 (816)
||+|||++........ ......|++.|+|||++.. ..++.++|||||||++|+|++|+.||........
T Consensus 164 kl~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~ 237 (286)
T cd06638 164 KLVDFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA 237 (286)
T ss_pred EEccCCceeecccCCC------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH
Confidence 9999999987643221 2234569999999998753 4578999999999999999999999975543322
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 684 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 684 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
....... ..+. ...+...+..+.+|+.+||+.+|.+||++.+.+.+
T Consensus 238 ~~~~~~~---~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 238 LFKIPRN---PPPT-LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred Hhhcccc---CCCc-ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 2211111 0010 01122345679999999999999999999965543
No 162
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.3e-35 Score=318.25 Aligned_cols=244 Identities=23% Similarity=0.335 Sum_probs=196.2
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCC
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
|++.+.||.|+||.||+|.+. +..+++|.+..........+.+|+.+++.++||||++++++|. +..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566778999999999999986 6788999987665555667899999999999999999999874 457899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
++|..++.... .++++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 87 GAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 99998876533 46899999999999999999999987 9999999999999999999999999987654322
Q ss_pred CccccCCCCCCCCCCCccccc-----cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh--cCccccccCCCCCC
Q 003481 628 SFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLSSILDPLAGD 700 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--~~~~~~~~d~~~~~ 700 (816)
.......|++.|+|||++. +..++.++|||||||++|+|++|++||........... .+..... .
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------~ 229 (282)
T cd06643 158 --QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL------A 229 (282)
T ss_pred --cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC------C
Confidence 1223456899999999874 44578899999999999999999999975443222211 1111111 1
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.+..++..+.+|+.+||+.+|.+||++.+.+.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 230 QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 23335568999999999999999999985543
No 163
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2e-35 Score=314.11 Aligned_cols=253 Identities=26% Similarity=0.429 Sum_probs=200.3
Q ss_pred hcCCCccceeeeecceEEEEEEEc--C---eEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--G---RTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g---~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
+++|+..+.||+|+||.||+|.+. + ..||+|.+.... ......+.+|+.++.+++||||+++++++.+ ..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888899999999999999874 3 369999986553 2334578899999999999999999999843 5789
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
||||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999999986543 46899999999999999999999987 9999999999999999999999999998765
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCC
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPL 697 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~ 697 (816)
...... ........++.|+|||++....++.++|||||||++|+|++ |..||..... ....+..+.
T Consensus 159 ~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-------- 227 (268)
T cd05063 159 DDPEGT---YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-------- 227 (268)
T ss_pred cccccc---eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC--------
Confidence 332110 11122234567999999988889999999999999999998 9999954322 222222221
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
....+...+..+.+++.+||..+|.+||++. .+...|+.+
T Consensus 228 ~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~-~i~~~l~~~ 267 (268)
T cd05063 228 RLPAPMDCPSAVYQLMLQCWQQDRARRPRFV-DIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHhh
Confidence 1111223456789999999999999999999 677777654
No 164
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.6e-35 Score=312.81 Aligned_cols=251 Identities=25% Similarity=0.390 Sum_probs=198.4
Q ss_pred CCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCc------ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccce
Q 003481 471 NFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNM------QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~------~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV 541 (816)
+|...+.||.|+||.||+|... +..+|+|.+..... .....+.+|+.++++++|+||++++++|.+ ..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4777889999999999999874 78899998865432 122458899999999999999999999854 47899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999996543 5788999999999999999999988 99999999999999999999999999886542
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
...............|+..|+|||++.+..++.++|||||||++|+|++|..||...+.............. ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~ 230 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL----MPRL 230 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC----CCCC
Confidence 211111111223456899999999999888999999999999999999999999754433222211111111 1122
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+..++..+.+++.+||+.+|.+||++.+.+
T Consensus 231 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l 260 (265)
T cd06631 231 PDSFSAAAIDFVTSCLTRDQHERPSALQLL 260 (265)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 334567889999999999999999998554
No 165
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.3e-36 Score=334.41 Aligned_cols=247 Identities=23% Similarity=0.322 Sum_probs=194.0
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
..++|...+.||+|+||.||+++.. +..||+|++..... .....+.+|+.+++.++||||+++++++.+ ..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3467999999999999999999885 78899999865322 233457899999999999999999999854 4899
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
||||+++|+|.+++... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999988543 4788899999999999999999988 9999999999999999999999999998764
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccC----CCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCcccccc
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRTG----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSIL 694 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~ 694 (816)
.... .......||+.|+|||++... .++.++|||||||+||+|++|+.||....... ..+.....
T Consensus 194 ~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~---- 264 (370)
T cd05621 194 ETGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN---- 264 (370)
T ss_pred cCCc-----eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc----
Confidence 3221 122456799999999988653 37899999999999999999999997544321 11111110
Q ss_pred CCCCCCCCH--HHHHHHHHHHHHhhccCCCC--CCCChHHHHH
Q 003481 695 DPLAGDWPT--FVARRLVDLGLQCCELYGRE--RPDITPSLVK 733 (816)
Q Consensus 695 d~~~~~~~~--~~~~~l~~Li~~cl~~dP~~--RPs~~e~l~~ 733 (816)
...+|. ..+..+.+++..||..++.+ ||++.+.+.+
T Consensus 265 ---~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 265 ---SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ---ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 011222 34678889999999855543 7888765544
No 166
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-35 Score=322.06 Aligned_cols=256 Identities=26% Similarity=0.434 Sum_probs=203.0
Q ss_pred hcCCCccceeeeecceEEEEEEEc---------CeEEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEeccccC-
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE- 536 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~---------g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~- 536 (816)
.++|.+.+.||+|+||.||++... +..||+|.+.... ......+.+|+.++..+ +||||++++++|.+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357899999999999999999763 2469999987543 23345688899999999 79999999999843
Q ss_pred -CccceeeccCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL 602 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl 602 (816)
..++||||+++|+|.+++..... ...++|..++.|+.|++.||.|||+.+ ++||||||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 58899999999999999976431 135899999999999999999999987 9999999999999
Q ss_pred cCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH-
Q 003481 603 DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE- 680 (816)
Q Consensus 603 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~- 680 (816)
+.++.+||+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~ 249 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 249 (307)
T ss_pred cCCCcEEECCCcccccccccchh----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 99999999999998766432211 11122335578999999988889999999999999999998 8889864332
Q ss_pred -HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 681 -VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 681 -~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
+...+..+.. ...+...+..+.+|+.+||..+|.+||++. +++..|+.+..
T Consensus 250 ~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-evl~~l~~~~~ 301 (307)
T cd05098 250 ELFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDRILA 301 (307)
T ss_pred HHHHHHHcCCC--------CCCCCcCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHHH
Confidence 2222222211 122334567899999999999999999999 77788877643
No 167
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.9e-36 Score=330.91 Aligned_cols=252 Identities=21% Similarity=0.235 Sum_probs=195.1
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC------
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE------ 536 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------ 536 (816)
...++|...+.||+|+||.||++.+. +..||||++..... .....+.+|+.+++.++||||+++++++..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999875 88999999875432 234567889999999999999999998732
Q ss_pred --CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 537 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 537 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCc
Confidence 35899999965 56665532 4788999999999999999999988 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hh-----
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VS----- 686 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~----- 686 (816)
+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..... +.
T Consensus 165 ~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (355)
T cd07874 165 LARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237 (355)
T ss_pred ccccCCCcc-------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 998654322 123457899999999999889999999999999999999999999644321110 00
Q ss_pred -----------------c-Ccccccc---------CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 687 -----------------C-GKLSSIL---------DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 687 -----------------~-~~~~~~~---------d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
. .....+. -+.....+...+..+.+|+.+||+.||.+|||+.+.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred CHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 0 0000000 0000111222456789999999999999999999766554
No 168
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.5e-35 Score=333.15 Aligned_cols=256 Identities=29% Similarity=0.435 Sum_probs=202.7
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCccc-HHHHHHHHHHHhcCC-CCceeeEeccccC-
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQ-HPHLVTLLGACPE- 536 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~~-~~~~~~E~~il~~l~-HpnIv~l~g~~~~- 536 (816)
...++|.+.++||+|+||.||+|++. +..||+|++....... ...+.+|+.+|.++. ||||++++|+|..
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34456788899999999999999864 3579999997653332 346889999999997 9999999999854
Q ss_pred -CccceeeccCCCchhhhhhhcCC--------------------------------------------------------
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSN-------------------------------------------------------- 559 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~-------------------------------------------------------- 559 (816)
..++||||+++|+|.+++.....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 57899999999999999865321
Q ss_pred ---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCce
Q 003481 560 ---------------------------------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI 600 (816)
Q Consensus 560 ---------------------------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NI 600 (816)
...++|..++.|+.||+.||.|||+.+ |+||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceE
Confidence 134788889999999999999999977 99999999999
Q ss_pred EecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH
Q 003481 601 LLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG 679 (816)
Q Consensus 601 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~ 679 (816)
|++.++.+||+|||+++........ .......++..|+|||++....++.++|||||||++|||++ |..||....
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNY----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred EEeCCCEEEEEecCcceeccccccc----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999875432211 11233457889999999988889999999999999999998 899986432
Q ss_pred H---HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 680 E---VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 680 ~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
. ....+..+.. ...|...+..+.+|+.+||..+|.+||++. .|++.|+.+
T Consensus 347 ~~~~~~~~~~~~~~--------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~-ell~~L~~~ 399 (401)
T cd05107 347 MNEQFYNAIKRGYR--------MAKPAHASDEIYEIMQKCWEEKFEIRPDFS-QLVHLVGDL 399 (401)
T ss_pred chHHHHHHHHcCCC--------CCCCCCCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHHH
Confidence 2 1122222211 112333567899999999999999999999 677778765
No 169
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.6e-35 Score=317.25 Aligned_cols=255 Identities=24% Similarity=0.321 Sum_probs=203.7
Q ss_pred hcCCCccceeeeecceEEEEEEEc------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc---CCc
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP---EAW 538 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~---~~~ 538 (816)
.++|...+.||+|+||.||+|.+. +..|++|.+..... .....+.+|+.++.+++||||+++++++. ...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 467888899999999999999875 37799998865432 33456889999999999999999999873 347
Q ss_pred cceeeccCCCchhhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeec
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNV-----SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 613 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DF 613 (816)
+++++|+++|+|.+++...... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 8999999999999998764322 46899999999999999999999987 999999999999999999999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCcc
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKL 690 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~ 690 (816)
|+++.+...... .......++..|+|||++.+..++.++|||||||++|++++ |+.||..... ....+..+..
T Consensus 162 g~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~ 237 (280)
T cd05043 162 ALSRDLFPMDYH----CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR 237 (280)
T ss_pred CCcccccCCceE----EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCC
Confidence 999866433211 01123346778999999988889999999999999999999 9999964432 2222222211
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 691 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 691 ~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
...+...+..+.+++.+||..+|++||++. +++..|+.+.
T Consensus 238 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~~~~~l~~~~ 277 (280)
T cd05043 238 --------LAQPINCPDELFAVMACCWALDPEERPSFS-QLVQCLTDFH 277 (280)
T ss_pred --------CCCCCcCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHHHH
Confidence 111223456789999999999999999999 7778887664
No 170
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-35 Score=317.15 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=198.0
Q ss_pred HhcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CC
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EA 537 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~ 537 (816)
.+++|.+.+.||+|+||.||+|.+. +..||+|.+..... .....|.+|+.+++.++||||+++++++. +.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3567899999999999999999884 36789998865432 23456899999999999999999999874 35
Q ss_pred ccceeeccCCCchhhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC---CeeE
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN----VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKI 610 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vkL 610 (816)
.++||||+++++|.+++..... ...++|..++.++.||+.||.|||+.+ ++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 7899999999999999876532 235899999999999999999999988 99999999999998754 5999
Q ss_pred eecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhc
Q 003481 611 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSC 687 (816)
Q Consensus 611 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~ 687 (816)
+|||+++........ .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.... .....+..
T Consensus 161 ~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~ 236 (277)
T cd05036 161 ADFGMARDIYRASYY----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG 236 (277)
T ss_pred ccCccccccCCccce----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 999999876432211 11123334578999999998999999999999999999997 999996433 22222221
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 688 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+. ...++...+..+.+++.+||+.+|++||++.+ |++.|
T Consensus 237 ~~--------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~-vl~~l 275 (277)
T cd05036 237 GG--------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFAT-ILERI 275 (277)
T ss_pred CC--------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH-HHHHh
Confidence 11 11233445678999999999999999999994 55444
No 171
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.7e-35 Score=317.61 Aligned_cols=248 Identities=23% Similarity=0.325 Sum_probs=198.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~~ 545 (816)
++|++.++||.|+||.||+|.+. +..|++|.+..........+.+|+.+++.++||||++++++| ....++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 46888899999999999999885 789999999876666667789999999999999999999987 34589999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|..++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-- 164 (292)
T cd06644 92 PGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-- 164 (292)
T ss_pred CCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc--
Confidence 9999988876543 35899999999999999999999987 9999999999999999999999999987643321
Q ss_pred CCCccccCCCCCCCCCCCccccc-----cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~ 700 (816)
.......+++.|+|||++. ...++.++|||||||++|+|++|..||.............. ...+ ...
T Consensus 165 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~-~~~ 236 (292)
T cd06644 165 ----QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK---SEPP-TLS 236 (292)
T ss_pred ----cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc---CCCc-cCC
Confidence 1223456889999999884 34578899999999999999999999965433221111100 0011 111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.+...+..+.+++.+||..+|.+||++.+.+.
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 23345567899999999999999999985543
No 172
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.8e-35 Score=314.12 Aligned_cols=256 Identities=22% Similarity=0.325 Sum_probs=202.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~ 542 (816)
++|...+.||.|+||.||++... +..||||.+..... .....|.+|+.++..++||||++++++|. +..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 36778889999999999999874 88999998865432 23357889999999999999999999884 3578999
Q ss_pred eccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 543 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
||+++++|.+++.... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999886432 2346899999999999999999999988 99999999999999999999999999887654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
... ......|+..|+|||++.+..++.++||||||+++|+|++|..||........... ..+.....+ ...
T Consensus 159 ~~~------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~--~~~ 229 (267)
T cd08229 159 KTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIEQCDYP--PLP 229 (267)
T ss_pred CCc------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh-hhhhcCCCC--CCC
Confidence 321 12334688999999999888899999999999999999999999953321111100 011111111 011
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
+...+..+.+++.+||..+|.+|||+. .+.+.+..+
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~-~i~~~~~~~ 265 (267)
T cd08229 230 SDHYSEELRQLVNMCINPDPEKRPDIT-YVYDVAKRM 265 (267)
T ss_pred cccccHHHHHHHHHhcCCCcccCCCHH-HHHHHHhhh
Confidence 234667899999999999999999999 677777654
No 173
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.4e-35 Score=317.93 Aligned_cols=250 Identities=25% Similarity=0.383 Sum_probs=205.7
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
.+|...+.||.|+||.||+|... ++.|++|.+..........+.+|+.+++.++||||++++++|. +..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 46888899999999999999864 8899999997665555667899999999999999999999984 4589999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|..++.. ..+++.++..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 170 (296)
T cd06655 99 AGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS- 170 (296)
T ss_pred CCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc-
Confidence 99999998854 24899999999999999999999988 99999999999999999999999999886654321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh--cCccccccCCCCCCCCH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLSSILDPLAGDWPT 703 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--~~~~~~~~d~~~~~~~~ 703 (816)
......|++.|+|||.+.+..++.++|||||||++|+|++|+.||........... ..... ....+.
T Consensus 171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~------~~~~~~ 239 (296)
T cd06655 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP------ELQNPE 239 (296)
T ss_pred -----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc------ccCCcc
Confidence 12344688999999999988899999999999999999999999976544322211 11111 111233
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
..+..+.+||.+||..+|.+||++.+.+.+.+-..
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 45568999999999999999999998777666543
No 174
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-35 Score=320.43 Aligned_cols=256 Identities=27% Similarity=0.443 Sum_probs=203.4
Q ss_pred hcCCCccceeeeecceEEEEEEEc---------CeEEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEeccccC-
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE- 536 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~---------g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~- 536 (816)
.++|.+...||+|+||.||+++.. +..||+|.+.... ......+.+|+.++..+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 457888899999999999999752 3479999986543 23345788999999999 89999999999854
Q ss_pred -CccceeeccCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL 602 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl 602 (816)
..++||||+++|+|.+++..... ...++|..++.++.||+.||.|||+.+ |+||||||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence 47899999999999999976421 135889999999999999999999987 9999999999999
Q ss_pred cCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--
Q 003481 603 DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG-- 679 (816)
Q Consensus 603 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~-- 679 (816)
+.++.+||+|||+++........ .......+++.|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYY----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred cCCCcEEECCCccceeccccccc----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 99999999999999877543311 11233456778999999988889999999999999999998 788886432
Q ss_pred HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 680 EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 680 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
.....+..+.. ...+...+..+.+|+.+||+.+|.+||++. ++++.|+.+..
T Consensus 247 ~~~~~~~~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~-e~l~~l~~~~~ 298 (304)
T cd05101 247 ELFKLLKEGHR--------MDKPANCTNELYMMMRDCWHAIPSHRPTFK-QLVEDLDRILT 298 (304)
T ss_pred HHHHHHHcCCc--------CCCCCCCCHHHHHHHHHHcccChhhCCCHH-HHHHHHHHHHH
Confidence 22222322211 112234557899999999999999999998 67778877643
No 175
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.9e-36 Score=313.13 Aligned_cols=247 Identities=26% Similarity=0.318 Sum_probs=199.5
Q ss_pred CCCccceeeeecceEEEEEEEcC--eEEEEEEeccCCcccH---HHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~g--~~vAiK~l~~~~~~~~---~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
+|+..+.||.|.-|+||++.+.+ ..+|+|++.+...... .+.+.|-+||+.++||.++.||..|+. ..|||||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45556789999999999999985 7899999987755433 356789999999999999999999954 4789999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
||+||+|..+++++.. ..++...+.-++.+++.||+|||-.| ||+|||||+||||.++|++.|+||.++.......
T Consensus 158 yCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred cCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999998876654 57999999999999999999999998 9999999999999999999999999986542100
Q ss_pred Cc--------------------------------------------------CCCccccCCCCCCCCCCCccccccCCCC
Q 003481 624 LY--------------------------------------------------LPSFHRSTAPKGSFPYADPEYHRTGVLT 653 (816)
Q Consensus 624 ~~--------------------------------------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s 653 (816)
.. .+...+....+||-.|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 00 1111233456899999999999999999
Q ss_pred cchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCC--CCCCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 654 PKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDP--LAGDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 654 ~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
.++|+|+|||+||||+.|..||.+.+.-.. +..++.. .....+ .++..+.+||.+.|.+||.+|....
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~T------l~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKET------LRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhh------HHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccc
Confidence 999999999999999999999975543211 1112211 112223 5778999999999999999999844
No 176
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=6.8e-36 Score=321.53 Aligned_cols=243 Identities=24% Similarity=0.343 Sum_probs=192.9
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
.|+..+.||+|+||.||++.+. ++.||+|.+...... ....+.+|+.++.+++|+||+++++.+. +..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677789999999999999886 789999998654332 2345778999999999999999999874 45889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++++|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999998865432 45899999999999999999999987 9999999999999999999999999987654322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCH
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||......... ......+......++.
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~ 226 (285)
T cd05630 157 -------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR---EEVERLVKEVQEEYSE 226 (285)
T ss_pred -------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH---HHHHhhhhhhhhhcCc
Confidence 113346999999999999999999999999999999999999999743210000 0000011111112233
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCC
Q 003481 704 FVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
..+..+.+|+.+||+.||.+||++
T Consensus 227 ~~~~~~~~li~~~l~~~p~~R~s~ 250 (285)
T cd05630 227 KFSPDARSLCKMLLCKDPKERLGC 250 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHccCC
Confidence 455678999999999999999994
No 177
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=326.80 Aligned_cols=255 Identities=26% Similarity=0.430 Sum_probs=210.0
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc----C--eEEEEEEeccC-CcccHHHHHHHHHHHhcCCCCceeeEeccccCC-c
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML----G--RTVAIKMLYSH-NMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEA-W 538 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~----g--~~vAiK~l~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-~ 538 (816)
.........+.||.|.||.||+|.+. | -.||||..+.+ ...+.+.|..|..+|++++|||||+|+|+|.+. .
T Consensus 386 l~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~ 465 (974)
T KOG4257|consen 386 LRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPM 465 (974)
T ss_pred eehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccce
Confidence 33344455678999999999999885 2 35999998875 445567899999999999999999999999664 7
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
+||||.++.|.|..+|.... ..|+......++.||+.||.|||+.. +|||||...|||+...--+||+|||+++.
T Consensus 466 WivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred eEEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhh
Confidence 89999999999999998766 46888889999999999999999987 99999999999999999999999999999
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHHHHHHhhcCccccccCCC
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPL 697 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~d~~ 697 (816)
+.++..+ ..+...-..-|||||.+....+|.++|||.|||++||++. |..||...... ..+..+-...
T Consensus 541 ~ed~~yY-----kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs------DVI~~iEnGe 609 (974)
T KOG4257|consen 541 LEDDAYY-----KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS------DVIGHIENGE 609 (974)
T ss_pred ccccchh-----hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc------ceEEEecCCC
Confidence 9876644 3344455678999999999999999999999999999988 99999754431 1111111222
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
....|+.+++.|..|+.+||.++|.+||.+. ++...|..+
T Consensus 610 RlP~P~nCPp~LYslmskcWayeP~kRPrft-ei~~~lsdv 649 (974)
T KOG4257|consen 610 RLPCPPNCPPALYSLMSKCWAYEPSKRPRFT-EIKAILSDV 649 (974)
T ss_pred CCCCCCCCChHHHHHHHHHhccCcccCCcHH-HHHHHHHHH
Confidence 3345777888999999999999999999998 565555544
No 178
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.6e-35 Score=318.91 Aligned_cols=255 Identities=28% Similarity=0.448 Sum_probs=200.8
Q ss_pred HhcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--C
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--A 537 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~ 537 (816)
.+++|.+.+.||+|+||.||+|... +..||+|.+..... .....+.+|+.+++.++||||+++++++.+ .
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4568999999999999999999653 45799998865432 233468899999999999999999998843 5
Q ss_pred ccceeeccCCCchhhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeE
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN-------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 610 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL 610 (816)
.++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 7999999999999999975321 245678889999999999999999987 999999999999999999999
Q ss_pred eecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhc
Q 003481 611 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSC 687 (816)
Q Consensus 611 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~ 687 (816)
+|||+++........ .......++..|+|||.+.++.++.++|||||||++|||++ |..||..... ....+..
T Consensus 161 ~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 236 (288)
T cd05061 161 GDFGMTRDIYETDYY----RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 236 (288)
T ss_pred CcCCccccccccccc----cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999865433211 11223345778999999998899999999999999999999 7889864332 2222222
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 688 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
+.. ...+...+..+.+++.+||+.+|.+||++. .+++.|+..
T Consensus 237 ~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~ll~~l~~~ 278 (288)
T cd05061 237 GGY--------LDQPDNCPERVTDLMRMCWQFNPKMRPTFL-EIVNLLKDD 278 (288)
T ss_pred CCC--------CCCCCCCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHhh
Confidence 211 112333456899999999999999999999 566666653
No 179
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.9e-35 Score=311.57 Aligned_cols=246 Identities=26% Similarity=0.356 Sum_probs=201.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
++|...+.||.|+||.||+|... +..|++|.+..... ...+.+|+.++++++||||+++++++.+ ..++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 57888899999999999999886 68899999865433 6689999999999999999999998844 588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 81 GAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999999986543 46899999999999999999999988 99999999999999999999999999987654321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......|+..|+|||++.+..++.++||||||+++|+|++|+.||............... .+.....+...
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 225 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK----PPPTLSDPEKW 225 (256)
T ss_pred -----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC----CCCCCCchhhc
Confidence 123445889999999999889999999999999999999999999754433222111110 00111223445
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
+..+.+++.+||+.+|.+||++.+.+.
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 678999999999999999999986553
No 180
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.3e-35 Score=317.49 Aligned_cols=252 Identities=29% Similarity=0.478 Sum_probs=200.8
Q ss_pred hcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cc
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AW 538 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~ 538 (816)
.++|.....||.|+||.||++.+. +..||+|++..... .....|.+|+.++++++||||++++++|.+ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467889999999999999999863 57899999875432 334568899999999999999999999854 47
Q ss_pred cceeeccCCCchhhhhhhcC-------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCc
Q 003481 539 SLVYEYLPNGSLQDRLFRKS-------------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQN 599 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~N 599 (816)
++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 99999999999999986432 1235789999999999999999999987 9999999999
Q ss_pred eEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCCh
Q 003481 600 ILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLA 678 (816)
Q Consensus 600 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~ 678 (816)
||++.++.++|+|||++......... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYY----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred eEecCCCceEECccccceecccCccc----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999998865433211 11222345678999999988899999999999999999998 88888533
Q ss_pred H--HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 679 G--EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 679 ~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
. .....+..+... ..+...+..+.+|+.+||+.+|.+||++. ++.+.|+
T Consensus 237 ~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~-el~~~l~ 287 (288)
T cd05050 237 AHEEVIYYVRDGNVL--------SCPDNCPLELYNLMRLCWSKLPSDRPSFA-SINRILQ 287 (288)
T ss_pred CHHHHHHHHhcCCCC--------CCCCCCCHHHHHHHHHHcccCcccCCCHH-HHHHHhh
Confidence 2 222333333321 12333557899999999999999999999 5777665
No 181
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=326.98 Aligned_cols=247 Identities=29% Similarity=0.438 Sum_probs=211.0
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc---HHHHHHHHHHHhcCC-CCceeeEeccccC--Ccc
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWS 539 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~---~~~~~~E~~il~~l~-HpnIv~l~g~~~~--~~~ 539 (816)
....|.+.+.||.|.||.||+++.. |+.+|+|++.+....+ ...+.+|+.+|+++. |||||.++++|++ ..+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 4457888899999999999999885 8899999998776643 357899999999998 9999999999965 479
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC----CCeeEeeccc
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE----LSSKICDFGI 615 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~----~~vkL~DFGl 615 (816)
+|||++.||.|.+.+... . +++.++..++.|++.|+.|||+.+ |+||||||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~---~-~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---H-YSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc---c-CCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999776 2 899999999999999999999988 9999999999999543 5799999999
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccc
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSI 693 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~ 693 (816)
+.....+. .....+||+.|+|||++....|+..+||||+||++|.|++|.+||....+ ....+..+.+
T Consensus 186 a~~~~~~~-------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--- 255 (382)
T KOG0032|consen 186 AKFIKPGE-------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--- 255 (382)
T ss_pred ceEccCCc-------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC---
Confidence 99887632 35678999999999999999999999999999999999999999976553 3344555554
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 694 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 694 ~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+.....|+ .++..+.++|..|+..||..|+++.+.|.|
T Consensus 256 -~f~~~~w~-~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 -DFTSEPWD-DISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -CCCCCCcc-ccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 22233444 468899999999999999999999966653
No 182
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.6e-36 Score=319.12 Aligned_cols=244 Identities=26% Similarity=0.376 Sum_probs=191.3
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
+|...+.||+|+||.||+|.+. +..||+|++.... ......|.+|+.++.+++||||++++++|. +..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5777889999999999999874 7889999986543 233456889999999999999999999884 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|..+. .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 999996542 4678889999999999999999987 9999999999999999999999999998664322
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHh-hcCccccccCCCCCCC-CH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV-SCGKLSSILDPLAGDW-PT 703 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~-~~~~~~~~~d~~~~~~-~~ 703 (816)
.....||..|+|||++.+..++.++|||||||++|+|++|+.||.......... ..+....+.+...... ..
T Consensus 150 ------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (279)
T cd06619 150 ------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVG 223 (279)
T ss_pred ------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCC
Confidence 234578999999999998899999999999999999999999995321100000 0000000011111111 12
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
..+..+.+++.+||+.+|.+||++.+.+.
T Consensus 224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 224 QFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 24567899999999999999999985443
No 183
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.6e-35 Score=319.77 Aligned_cols=252 Identities=27% Similarity=0.420 Sum_probs=200.8
Q ss_pred hcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEecccc--CC
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EA 537 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~--~~ 537 (816)
.++|...+.||+|+||.||++... +..||+|++..... .....+.+|+.+++++ +||||++++++|. +.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357899999999999999999752 45799999875532 2345688999999999 7999999999984 35
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.++||||+++|+|.+++..... ..+++.++..|+.+++.||.|||+.+ |+|+||||+|||++.++.++|+|||+++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence 8899999999999999875432 34899999999999999999999987 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH---HHHHhhcCccccc
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE---VRRAVSCGKLSSI 693 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~---~~~~~~~~~~~~~ 693 (816)
........ .......++..|+|||++....++.++|||||||++|+|++ |..||..... ....+..+..
T Consensus 190 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~--- 262 (302)
T cd05055 190 DIMNDSNY----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYR--- 262 (302)
T ss_pred cccCCCce----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCc---
Confidence 66543211 11223456788999999998899999999999999999998 9999864332 1122222211
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 694 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 694 ~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
...+...+..+.+|+.+||..+|++||++. +++..|+.
T Consensus 263 -----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ell~~l~~ 300 (302)
T cd05055 263 -----MAQPEHAPAEIYDIMKTCWDADPLKRPTFK-QIVQLIGK 300 (302)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHHh
Confidence 111223456899999999999999999999 67677665
No 184
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.3e-35 Score=310.85 Aligned_cols=249 Identities=26% Similarity=0.348 Sum_probs=202.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
++|.....||.|+||.||+|... +..+++|++..........+.+|+.++++++||||+++++++. +..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888899999999999999875 6889999998766556678999999999999999999999874 4588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.......
T Consensus 83 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 155 (262)
T cd06613 83 GGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-- 155 (262)
T ss_pred CCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh--
Confidence 9999999886642 35889999999999999999999987 9999999999999999999999999987664322
Q ss_pred CCCccccCCCCCCCCCCCccccccC---CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTG---VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~ 702 (816)
.......++..|+|||.+.+. .++.++|||||||++|+|+||+.||.............. .. +.+.....+
T Consensus 156 ----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 229 (262)
T cd06613 156 ----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK-SN-FPPPKLKDK 229 (262)
T ss_pred ----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cc-CCCccccch
Confidence 122345688899999998776 889999999999999999999999975443222111110 00 111111223
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...+..+.+++.+||..+|.+||++.+.+
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il 258 (262)
T cd06613 230 EKWSPVFHDFIKKCLTKDPKKRPTATKLL 258 (262)
T ss_pred hhhhHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 45677899999999999999999998544
No 185
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.1e-35 Score=311.56 Aligned_cols=243 Identities=28% Similarity=0.447 Sum_probs=198.4
Q ss_pred cCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-CCccceeeccCCC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLPNG 548 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~lV~E~~~~g 548 (816)
++|.+.+.||+|+||.||+|...+..||+|.+.... ....+.+|+.++.+++||||+++++++. +..++||||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence 457888999999999999999889999999986532 3457889999999999999999999874 4588999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 628 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 628 (816)
+|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 84 ~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----- 154 (254)
T cd05083 84 NLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----- 154 (254)
T ss_pred CHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC-----
Confidence 99999976542 45889999999999999999999987 9999999999999999999999999987653321
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHH
Q 003481 629 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.....+..|+|||++.++.++.++|||||||++|+|++ |+.||..... ....+..+... ..+...
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~ 222 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM--------EPPEGC 222 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC--------CCCCcC
Confidence 12234578999999988899999999999999999998 9999964432 22333222111 112335
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+..+.+++.+||+.+|..||++. .|...|+
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~ 252 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFH-KLREKLE 252 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHH-HHHHHHc
Confidence 56889999999999999999998 5655554
No 186
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.8e-35 Score=329.71 Aligned_cols=251 Identities=22% Similarity=0.258 Sum_probs=194.2
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE------- 536 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------- 536 (816)
..++|...+.||+|+||.||++.+. +..||||++.... ......+.+|+.+++.++||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999875 7889999987542 2334567899999999999999999987632
Q ss_pred -CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccc
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 615 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGl 615 (816)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence 25899999965 67666632 4788999999999999999999987 99999999999999999999999999
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hhc-C---
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-G--- 688 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~~-~--- 688 (816)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..... +.. +
T Consensus 173 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 173 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred ccccCCCC-------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 98654322 123456899999999999999999999999999999999999999644321110 000 0
Q ss_pred -------------------cc---------ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 689 -------------------KL---------SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 689 -------------------~~---------~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.. ....-+............+.+|+.+||+.||.+|||+.+.+.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp 319 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 00 00000000111112345789999999999999999999766543
No 187
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.4e-35 Score=316.33 Aligned_cols=251 Identities=24% Similarity=0.288 Sum_probs=193.4
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
+|...+.||.|+||.||+|... +..||||.+..... .....+.+|+.++.+++||||+++++++. +..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778889999999999999885 78999999865432 23456889999999999999999999984 458899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+. ++|.+++........+++..++.++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 688888865544456899999999999999999999987 99999999999999999999999999976543221
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc----Ccc---------
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GKL--------- 690 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----~~~--------- 690 (816)
......+++.|+|||++.+. .++.++|||||||++|+|+||++||............ +..
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 157 ------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVT 230 (285)
T ss_pred ------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcch
Confidence 12334678999999987654 5789999999999999999999999754332111110 000
Q ss_pred -----cccc----CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 691 -----SSIL----DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 691 -----~~~~----d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...+ ...........+..+.+|+.+||+.||.+||++.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll 280 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKAL 280 (285)
T ss_pred hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHh
Confidence 0000 0000001112456788999999999999999998544
No 188
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-35 Score=318.19 Aligned_cols=250 Identities=27% Similarity=0.378 Sum_probs=197.7
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
+|++.+.||+|+||.||++.+. +..||+|.+.... ......+.+|+.++.+++||||+++++++. +..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5788889999999999999986 8899999886542 233457889999999999999999999874 4588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|..++........+++..+..++.+++.||.|||+.. +|+|+||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 157 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-- 157 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--
Confidence 99999998866433346899999999999999999999742 39999999999999999999999999987654322
Q ss_pred CCCccccCCCCCCCCCCCccccccC------CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTG------VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~------~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~ 699 (816)
.....+++.|+|||++.+. .++.++|||||||++|+|++|+.||.......... .+..+.+....
T Consensus 158 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~ 228 (286)
T cd06622 158 ------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA---QLSAIVDGDPP 228 (286)
T ss_pred ------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH---HHHHHhhcCCC
Confidence 2334688899999988554 35889999999999999999999996432211100 01111121222
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
..+..++..+.+|+.+||+.+|.+||++.+.+.+
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 229 TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 3445577889999999999999999999865543
No 189
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-36 Score=319.20 Aligned_cols=244 Identities=25% Similarity=0.352 Sum_probs=207.5
Q ss_pred cCCCccceeeeecceEEEEEEE--cCeEEEEEEeccCCcccH--HHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQ--LEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~--~g~~vAiK~l~~~~~~~~--~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
+-|...+.||+|.|+.|-++++ .|..||||++.+...... ..+.+|++.|+.++|||||+||.+.. ..+|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 3467778899999999999876 599999999988766543 46889999999999999999999985 45999999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEec-CCCCeeEeecccceeccCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD-SELSSKICDFGICRLVTED 622 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~-~~~~vkL~DFGla~~~~~~ 622 (816)
+-++|+|.++|.++. ..+.+....+++.||+.|+.|+|+.+ +|||||||+||.+- .-|-+||.|||++..+.++
T Consensus 98 LGD~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred ecCCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 999999999998876 46889999999999999999999998 99999999999875 5688999999999888766
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCC-cchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLT-PKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
. ..+..+|++.|.|||++.+..|+ +++||||||||||-|++|++||...++... +.-++|- ....
T Consensus 173 ~-------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET------LTmImDC-KYtv 238 (864)
T KOG4717|consen 173 K-------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET------LTMIMDC-KYTV 238 (864)
T ss_pred c-------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh------hhhhhcc-cccC
Confidence 5 34677899999999999999886 799999999999999999999975443221 2222221 2245
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
|..++.++.+||..||..||.+|.++.+++-
T Consensus 239 PshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 239 PSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred chhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 8889999999999999999999999985443
No 190
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.3e-35 Score=326.05 Aligned_cols=254 Identities=29% Similarity=0.455 Sum_probs=199.0
Q ss_pred cCCCccceeeeecceEEEEEEE-------cCeEEEEEEeccCCcc-cHHHHHHHHHHHhcC-CCCceeeEeccccC---C
Q 003481 470 CNFSESFKVGQGGFGCVYKGEM-------LGRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKL-QHPHLVTLLGACPE---A 537 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~-------~g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l-~HpnIv~l~g~~~~---~ 537 (816)
++|.+.+.||+|+||.||+|.+ .++.||||++...... ....+.+|+.+|.++ +||||++++++|.. .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4788899999999999999974 2578999999754332 344688999999999 78999999998743 3
Q ss_pred ccceeeccCCCchhhhhhhcCC----------------------------------------------------------
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN---------------------------------------------------------- 559 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~---------------------------------------------------------- 559 (816)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 6899999999999998864321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccC
Q 003481 560 ------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 633 (816)
Q Consensus 560 ------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 633 (816)
...++|..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......... ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~----~~~~ 239 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKG 239 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcch----hhcC
Confidence 124788999999999999999999987 999999999999999999999999999876432211 1123
Q ss_pred CCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH---HHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 003481 634 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---EVRRAVSCGKLSSILDPLAGDWPTFVARRL 709 (816)
Q Consensus 634 ~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l 709 (816)
...+++.|+|||++.+..++.++||||||+++|+|++ |..||.... .....+..+... ..+...+..+
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 311 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--------RAPDYTTPEM 311 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC--------CCCCCCCHHH
Confidence 3446778999999988899999999999999999997 999986432 222222222211 1122234578
Q ss_pred HHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 710 VDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 710 ~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
.+++..||+.+|.+||++. +|++.|+.+.
T Consensus 312 ~~~~~~cl~~~p~~Rps~~-eil~~l~~~~ 340 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFS-ELVEHLGNLL 340 (343)
T ss_pred HHHHHHHccCChhhCcCHH-HHHHHHHHHH
Confidence 9999999999999999999 6667777653
No 191
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.1e-35 Score=328.50 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=193.0
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC------
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE------ 536 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------ 536 (816)
...++|.....||.|+||.||+|.+. +..||||++..... .....+.+|+.+|++++||||+++++++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 44578999999999999999999875 78899999865432 233467789999999999999999988732
Q ss_pred --CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 537 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 537 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
..+++++++ +++|.+++.. ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCc
Confidence 257899988 7899887743 35899999999999999999999988 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--h-h-cCc
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--V-S-CGK 689 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~-~-~~~ 689 (816)
+++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..... + . .+.
T Consensus 164 ~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07878 164 LARQADDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT 234 (343)
T ss_pred cceecCCC---------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99875432 234568999999998876 57899999999999999999999999643321111 0 0 000
Q ss_pred -------------cccccCCCCCCCC--------HHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 690 -------------LSSILDPLAGDWP--------TFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 690 -------------~~~~~d~~~~~~~--------~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
....+.. ....+ ....+.+.+|+.+||+.||.+|||+.+.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQS-LPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred CCHHHHHhcchhhHHHHhhc-cccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0000000 00001 11234578999999999999999999766543
No 192
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-35 Score=320.03 Aligned_cols=248 Identities=25% Similarity=0.366 Sum_probs=202.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
.+|...+.||.|+||.||+|... +..||+|.+..........+.+|+.+++.++||||++++++|. +..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 57888899999999999999874 8899999997766556667889999999999999999999884 3588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~- 170 (297)
T cd06656 99 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (297)
T ss_pred CCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc-
Confidence 99999998854 24788999999999999999999987 99999999999999999999999999987644321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......+++.|+|||.+.+..++.++|||||||++|+|++|..||...+........... .......+...
T Consensus 171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~ 241 (297)
T cd06656 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN----GTPELQNPERL 241 (297)
T ss_pred -----CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC----CCCCCCCcccc
Confidence 123446889999999999888999999999999999999999999654432211110000 00111234455
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
+..+.+|+.+||..+|.+||++.+.+.+.
T Consensus 242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 242 SAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 67789999999999999999999655443
No 193
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.6e-35 Score=309.57 Aligned_cols=244 Identities=36% Similarity=0.589 Sum_probs=200.0
Q ss_pred ceeeeecceEEEEEEEc-----CeEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
+.||+|+||.||+|... +..|++|.+....... ...+.+|+.++..++|+||+++++++.. ..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 36999999999999886 6789999997765443 5678999999999999999999998854 58899999999
Q ss_pred CchhhhhhhcCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 548 GSLQDRLFRKSN------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 548 gsL~~~l~~~~~------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
++|.+++..... ...+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999977521 256899999999999999999999987 99999999999999999999999999988765
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~ 698 (816)
... ........+++.|+|||.+....++.++|||||||++|+|++ |..||..... ....+..+. .
T Consensus 158 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~ 225 (262)
T cd00192 158 DDY----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY--------R 225 (262)
T ss_pred ccc----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------C
Confidence 432 112345567889999999988889999999999999999999 6999975432 222222211 1
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
...+...+..+.+++.+||..+|.+||++. .++..|
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~l~~~l 261 (262)
T cd00192 226 LPKPEYCPDELYELMLSCWQLDPEDRPTFS-ELVERL 261 (262)
T ss_pred CCCCccCChHHHHHHHHHccCCcccCcCHH-HHHHhh
Confidence 223444577899999999999999999998 454443
No 194
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4.4e-35 Score=318.06 Aligned_cols=252 Identities=29% Similarity=0.480 Sum_probs=200.0
Q ss_pred cCCCccceeeeecceEEEEEEEc--Ce----EEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-Cccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GR----TVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~----~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV 541 (816)
++|...+.||+|+||.||+|.+. |. .||+|.+..... .....+.+|+.++..++||||++++|+|.. ..+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v 86 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV 86 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence 45677789999999999999873 43 579998865433 223468899999999999999999999843 57799
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
++|+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 87 TQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred ehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999987543 35889999999999999999999987 99999999999999999999999999987653
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCCh--HHHHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLA--GEVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~--~~~~~~~~~~~~~~~~d~~~ 698 (816)
.... .......++..|+|||++.+..++.++|||||||++|||++ |..||... ......+..+... +
T Consensus 162 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----~-- 231 (303)
T cd05110 162 DEKE----YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL----P-- 231 (303)
T ss_pred cccc----cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC----C--
Confidence 3211 11223446788999999988899999999999999999997 99999643 2233333322211 1
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
.+...+..+.+++..||..+|.+||++. .++..|+.+.
T Consensus 232 --~~~~~~~~~~~li~~c~~~~p~~Rp~~~-~l~~~l~~~~ 269 (303)
T cd05110 232 --QPPICTIDVYMVMVKCWMIDADSRPKFK-ELAAEFSRMA 269 (303)
T ss_pred --CCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHH
Confidence 1122345789999999999999999999 6777787764
No 195
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.5e-35 Score=311.08 Aligned_cols=243 Identities=23% Similarity=0.308 Sum_probs=198.7
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
+|.+.+.||.|+||.||++.+. +..||+|.+.... ......+.+|+.+++.++||||+++++++.+ ..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999875 7889999986433 2344568899999999999999999998843 588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 81 DGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccc-
Confidence 9999999886533 245789999999999999999999988 99999999999999999999999999987654321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......|++.|+|||++.+..++.++||||||+++|+|++|..||...+.. ...+..+... ..+.
T Consensus 156 -----~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 222 (255)
T cd08219 156 -----YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK--------PLPS 222 (255)
T ss_pred -----ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC--------CCCc
Confidence 123456899999999998888999999999999999999999999754432 1222222221 1233
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
..+..+.+|+.+||+.||.+||++.+.+
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il 250 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTIL 250 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHh
Confidence 4556789999999999999999999544
No 196
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.8e-35 Score=314.33 Aligned_cols=246 Identities=23% Similarity=0.319 Sum_probs=196.0
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
++|...+.||+|+||.||+|.+. +..||+|.+..........+.+|+.++..++||||+++++++. +..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777888999999999999874 7899999987665555566889999999999999999999874 4588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++.... .+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 89 GGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 9999999886543 5889999999999999999999988 9999999999999999999999999987664322
Q ss_pred CCCccccCCCCCCCCCCCccccc---cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhcCccccccCCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLAGD 700 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~~~~~~~d~~~~~ 700 (816)
.......|++.|+|||++. .+.++.++|||||||++|+|++|..||......... ....... .+.. .
T Consensus 161 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~-~ 232 (267)
T cd06645 161 ----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQ---PPKL-K 232 (267)
T ss_pred ----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCC---CCcc-c
Confidence 1223457899999999874 456889999999999999999999998543321111 1111111 1111 0
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
....++..+.+++.+||..+|.+||++.+.+
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll 263 (267)
T cd06645 233 DKMKWSNSFHHFVKMALTKNPKKRPTAEKLL 263 (267)
T ss_pred ccCCCCHHHHHHHHHHccCCchhCcCHHHHh
Confidence 1112345789999999999999999998544
No 197
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.7e-35 Score=307.83 Aligned_cols=240 Identities=28% Similarity=0.463 Sum_probs=192.4
Q ss_pred eeeeecceEEEEEEEc-CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCchhh
Q 003481 477 KVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQD 552 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL~~ 552 (816)
+||.|+||.||+|... +..||+|.+...... ....|.+|+.++..++||||++++++|.. ..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 6899999999999875 678999998765432 23468899999999999999999999844 5889999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcccc
Q 003481 553 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 632 (816)
Q Consensus 553 ~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 632 (816)
++.... ..+++..++.++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++......... ..
T Consensus 82 ~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-----~~ 151 (250)
T cd05085 82 FLRKKK--DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-----SS 151 (250)
T ss_pred HHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccc-----cC
Confidence 886543 35889999999999999999999987 999999999999999999999999998765432211 11
Q ss_pred CCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHHHHHH
Q 003481 633 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRL 709 (816)
Q Consensus 633 ~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~l 709 (816)
....+++.|+|||++.++.++.++||||||+++|+|++ |..||..... ....+..+.. ...+...+..+
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 223 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR--------MSCPQKCPDDV 223 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC--------CCCCCCCCHHH
Confidence 22345678999999998899999999999999999999 9999964332 2222222211 11223356789
Q ss_pred HHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 710 VDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 710 ~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+++.+||..+|.+||++. ++...|
T Consensus 224 ~~li~~~l~~~p~~Rp~~~-~l~~~l 248 (250)
T cd05085 224 YKVMQRCWDYKPENRPKFS-ELQKEL 248 (250)
T ss_pred HHHHHHHcccCcccCCCHH-HHHHHh
Confidence 9999999999999999999 555544
No 198
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.2e-35 Score=320.43 Aligned_cols=251 Identities=28% Similarity=0.427 Sum_probs=195.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--Ce--EEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GR--TVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~--~vAiK~l~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV 541 (816)
++|.+.+.||+|+||.||+|.+. +. .+++|.+.... ......|.+|+.++.++ +||||+++++++.. ..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46788889999999999999874 43 46777775432 23345788999999999 89999999999843 48899
Q ss_pred eeccCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 542 YEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
|||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 999999999999875431 235889999999999999999999987 9999999999999999999
Q ss_pred eEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHHH--HHHh
Q 003481 609 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAV 685 (816)
Q Consensus 609 kL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~ 685 (816)
||+|||++....... ......++..|+|||++....++.++|||||||++|+|+| |..||...... ...+
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 236 (303)
T cd05088 164 KIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 236 (303)
T ss_pred EeCccccCcccchhh-------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 999999986432111 1122334678999999988889999999999999999998 99999643321 1111
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 686 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 686 ~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
..+ .....+...+..+.+|+.+||+.+|.+||++. .++..|+.+.
T Consensus 237 ~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~il~~l~~~~ 281 (303)
T cd05088 237 PQG--------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFA-QILVSLNRML 281 (303)
T ss_pred hcC--------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHH
Confidence 111 01112223456789999999999999999999 4555566553
No 199
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-36 Score=323.39 Aligned_cols=258 Identities=27% Similarity=0.426 Sum_probs=205.6
Q ss_pred cCCCccceeeeecceEEEEEEEcC-eEEEEEEeccCCcccH-HHHHHHHHHHhcCCCCceeeEeccc--cCCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLG-RTVAIKMLYSHNMQGQ-LEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g-~~vAiK~l~~~~~~~~-~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~~ 545 (816)
....+.++||+|-||.|.++...+ ..||+|.++....... .+|..|+++|.+|+|||||.|+|+| ++.+++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 345667889999999999999986 8999999998866544 7899999999999999999999999 55689999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++|+|.++|..+.... +.-....+|+.||+.|++||.+.+ +|||||.+.|+|+|.++++||+|||+++.+-.+..+
T Consensus 618 EnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred hcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999998875322 445667789999999999999988 999999999999999999999999999976555432
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh--CCCCCCChHHHHHHhhcCccccccCC-CCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT--GRLPVGLAGEVRRAVSCGKLSSILDP-LAGDWP 702 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt--G~~Pf~~~~~~~~~~~~~~~~~~~d~-~~~~~~ 702 (816)
+.....+-...|||||.+..+++|+++|||+||++|||+++ ...||.....-.-.-..+.+..--.+ .....|
T Consensus 694 ----~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P 769 (807)
T KOG1094|consen 694 ----RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP 769 (807)
T ss_pred ----eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence 22344556788999999999999999999999999999876 78899644331111111111110000 112345
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
.-++..+.+|+++||..+-.+||++.+ |...|.
T Consensus 770 ~~cp~~lyelml~Cw~~es~~RPsFe~-lh~~lq 802 (807)
T KOG1094|consen 770 PACPQGLYELMLRCWRRESEQRPSFEQ-LHLFLQ 802 (807)
T ss_pred CcCcHHHHHHHHHHhchhhhcCCCHHH-HHHHHH
Confidence 567778999999999999999999994 444443
No 200
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=325.65 Aligned_cols=243 Identities=27% Similarity=0.354 Sum_probs=199.1
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccH---HHHHHHHHHHhcCCCCceeeEeccc--cCCccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~---~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E 543 (816)
-|...+.||.|+||.||-+++. ...||||.+.....+.. .++..|+..|.+++|||+|.+-|+| ....+||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 3667788999999999999885 77899999977655443 4678999999999999999999998 345889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|| -||-.|+|.-.. .++-..++..|+.+.+.||.|||+++ .||||||..||||++.|.|||+|||.|....+.
T Consensus 107 YC-lGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 107 YC-LGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HH-hccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 99 568888886655 47888999999999999999999998 999999999999999999999999999877643
Q ss_pred CcCCCccccCCCCCCCCCCCccccc---cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~ 700 (816)
..++|||.|||||++. .|.|+-++|||||||+..||.-.++|+...+.....+... ..-.|..
T Consensus 180 ---------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIA---QNesPtL-- 245 (948)
T KOG0577|consen 180 ---------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA---QNESPTL-- 245 (948)
T ss_pred ---------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHH---hcCCCCC--
Confidence 4568999999999774 5789999999999999999999999976555433322211 0011111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.....+..|.+++..||++-|.+|||..+.|.+.
T Consensus 246 qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 246 QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 1345678899999999999999999998655443
No 201
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.5e-35 Score=312.48 Aligned_cols=252 Identities=27% Similarity=0.420 Sum_probs=199.9
Q ss_pred cCCCccceeeeecceEEEEEEEc-----CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV 541 (816)
++|.+.+.||+|+||.||+|.+. +..||+|.+..... .....|.+|+.++.+++||||+++++++. +..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46788899999999999999873 33799999865432 23457899999999999999999999984 357899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++++|.+++.... ..+++.+++.|+.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999997653 35899999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~ 698 (816)
..... .......++..|+|||++.+..++.++|||||||++|++++ |..||..... ....+..+..
T Consensus 159 ~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-------- 227 (267)
T cd05066 159 DPEAA---YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-------- 227 (267)
T ss_pred cccee---eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc--------
Confidence 32111 11122334568999999998899999999999999999887 9999964332 2222222210
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
...+...+..+.+++.+||+.+|.+||++. .+.+.|+.+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~~ 266 (267)
T cd05066 228 LPAPMDCPAALHQLMLDCWQKDRNERPKFE-QIVSILDKL 266 (267)
T ss_pred CCCCCCCCHHHHHHHHHHcccCchhCCCHH-HHHHHHHhh
Confidence 111223456789999999999999999999 677777653
No 202
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.3e-35 Score=310.34 Aligned_cols=244 Identities=30% Similarity=0.455 Sum_probs=196.2
Q ss_pred eeeeecceEEEEEEEc---C--eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-CccceeeccCCCc
Q 003481 477 KVGQGGFGCVYKGEML---G--RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPNGS 549 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~---g--~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~E~~~~gs 549 (816)
.||+|++|.||+|.+. + ..||||.+..... .....|.+|+.++++++||||+++++++.+ ..++||||+++|+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 81 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGS 81 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCc
Confidence 6899999999999874 2 3699999987766 455679999999999999999999998754 5789999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCc
Q 003481 550 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 629 (816)
Q Consensus 550 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 629 (816)
|.+++..... ..++|..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......... .
T Consensus 82 L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---~ 154 (257)
T cd05040 82 LLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---Y 154 (257)
T ss_pred HHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc---e
Confidence 9999976543 46899999999999999999999987 999999999999999999999999999877543211 1
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHHH--HHHhhcCccccccCCCCCCCCHHHH
Q 003481 630 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 630 ~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
.......++..|+|||++.+..++.++|||||||++|+|++ |..||...... ...+.. . ......+...+
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~------~~~~~~~~~~~ 227 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK-E------GERLERPEACP 227 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-c------CCcCCCCccCC
Confidence 11224567889999999998899999999999999999999 99999643322 111111 0 00111233355
Q ss_pred HHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 707 RRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
..+.+++.+||+.+|.+||++. .+...|
T Consensus 228 ~~~~~li~~~l~~~p~~Rps~~-~~~~~l 255 (257)
T cd05040 228 QDIYNVMLQCWAHNPADRPTFA-ALREFL 255 (257)
T ss_pred HHHHHHHHHHCCCCcccCCCHH-HHHHHh
Confidence 7899999999999999999999 455444
No 203
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.2e-35 Score=311.36 Aligned_cols=233 Identities=25% Similarity=0.392 Sum_probs=183.3
Q ss_pred eeeeecceEEEEEEEc--------------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 477 KVGQGGFGCVYKGEML--------------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~--------------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
.||+|+||.||+|... ...|++|.+..........|..|+.++..++||||++++++|.. ..++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 5899999999999753 23589999876555555678899999999999999999999843 5789
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCC-------eeEeec
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS-------SKICDF 613 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~-------vkL~DF 613 (816)
||||+++|+|..++.... ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. ++++||
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999998876543 35899999999999999999999987 999999999999987664 899999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccc-cCCCCcchhHhHHHHHHHHHH-hCCCCCCChHHHHH-HhhcCcc
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLL-TGRLPVGLAGEVRR-AVSCGKL 690 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDVwSlGviL~ell-tG~~Pf~~~~~~~~-~~~~~~~ 690 (816)
|++...... ....++..|+|||++. +..++.++|||||||++|+|+ +|..||........ ....+..
T Consensus 157 g~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 226 (262)
T cd05077 157 GIPITVLSR----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQC 226 (262)
T ss_pred CCCccccCc----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCc
Confidence 998654321 2345788999999886 467899999999999999998 58888864322111 1111111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 691 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 691 ~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
. . .......+.+|+.+||+.||.+||++. ++++.
T Consensus 227 ~-~--------~~~~~~~~~~li~~cl~~dp~~Rp~~~-~il~~ 260 (262)
T cd05077 227 M-L--------VTPSCKELADLMTHCMNYDPNQRPFFR-AIMRD 260 (262)
T ss_pred c-C--------CCCChHHHHHHHHHHcCCChhhCcCHH-HHHHh
Confidence 0 0 111245789999999999999999998 45443
No 204
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3e-35 Score=318.06 Aligned_cols=259 Identities=26% Similarity=0.404 Sum_probs=196.4
Q ss_pred cCCCccceeeeecceEEEEEEEc------------------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeE
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML------------------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTL 530 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~------------------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l 530 (816)
++|++.++||+|+||.||++... +..||+|++..... .....|.+|+.++..++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998542 24689999875432 334578999999999999999999
Q ss_pred ecccc--CCccceeeccCCCchhhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCce
Q 003481 531 LGACP--EAWSLVYEYLPNGSLQDRLFRKSN--------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI 600 (816)
Q Consensus 531 ~g~~~--~~~~lV~E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NI 600 (816)
++++. +..++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 99984 458899999999999999876431 134788899999999999999999988 99999999999
Q ss_pred EecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh--CCCCCCCh
Q 003481 601 LLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT--GRLPVGLA 678 (816)
Q Consensus 601 Ll~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt--G~~Pf~~~ 678 (816)
|++.++.++|+|||+++.+...... .......+++.|++||....+.++.++|||||||++|||++ |..||...
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcce----eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9999999999999999865433211 11223345678999999888889999999999999999998 77888643
Q ss_pred HHHHHHhhcCccc-cccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 679 GEVRRAVSCGKLS-SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 679 ~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
.........+... ..........+..++..+.+|+.+||+.||.+||++. .+.+.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~-~i~~~l~ 295 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQ-EIHATLL 295 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHH-HHHHHHh
Confidence 2211110000000 0000000111223457899999999999999999999 5656554
No 205
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.8e-35 Score=316.82 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=200.7
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
.++|.+.+.||.|+||.||+|.+. +..||+|++..........|.+|+.++++++||||+++++++. ...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888899999999999999885 7889999997766556667999999999999999999999984 357899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++........
T Consensus 84 ~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 84 CDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred cCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 99999999886644 35899999999999999999999988 99999999999999999999999998876543221
Q ss_pred cCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhcCccccccCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPL 697 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~~~~~~~d~~ 697 (816)
......|++.|+|||++. ...++.++|||||||++|+|++|+.||......... +..+...
T Consensus 159 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------ 226 (280)
T cd06611 159 ------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPP------ 226 (280)
T ss_pred ------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCC------
Confidence 223456899999999874 345788999999999999999999999755432221 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
....+...+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 111233455688999999999999999999966544
No 206
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1e-35 Score=332.25 Aligned_cols=252 Identities=23% Similarity=0.307 Sum_probs=195.0
Q ss_pred HHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC
Q 003481 462 LADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE 536 (816)
Q Consensus 462 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~ 536 (816)
+.++....++|.+.+.||+|+||.||++.+. +..||+|++..... .....+.+|+.++..++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3444555688999999999999999999886 78899999864322 233457889999999999999999999854
Q ss_pred --CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 537 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 537 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
..++||||+++|+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCC
Confidence 478999999999999988543 3788889999999999999999988 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCccccccC----CCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcC
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCG 688 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~ 688 (816)
++........ .......||+.|+|||++... .++.++|||||||+||||++|..||...+.. ...+...
T Consensus 188 ~a~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~ 262 (371)
T cd05622 188 TCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 262 (371)
T ss_pred ceeEcCcCCc-----ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 9987653321 122456799999999988653 3789999999999999999999999754432 1222111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCC---CCCChHHH
Q 003481 689 KLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRE---RPDITPSL 731 (816)
Q Consensus 689 ~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~---RPs~~e~l 731 (816)
.- ......+...+..+.+||.+||. +|.. ||++.+.+
T Consensus 263 ~~-----~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~ 302 (371)
T cd05622 263 KN-----SLTFPDDNDISKEAKNLICAFLT-DREVRLGRNGVEEIK 302 (371)
T ss_pred CC-----cccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHh
Confidence 10 00001112356788999999998 5554 56666433
No 207
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.5e-35 Score=309.56 Aligned_cols=246 Identities=28% Similarity=0.490 Sum_probs=191.0
Q ss_pred eeeeecceEEEEEEEc-----CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc--C-CccceeeccCC
Q 003481 477 KVGQGGFGCVYKGEML-----GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--E-AWSLVYEYLPN 547 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~-~~~lV~E~~~~ 547 (816)
.||+|+||.||+|.+. +..||||.+.... ......+.+|+.+++.++||||++++++|. + ..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5899999999999863 3579999985432 234557889999999999999999999763 2 37899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..........
T Consensus 82 ~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 82 GDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 99999986543 34678888999999999999999987 99999999999999999999999999986543221110
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhC-CCCCCChHH--HHHHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTG-RLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG-~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
.......+++.|+|||++.+..++.++|||||||++|||++| .+||..... ....+..+. ....+..
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 226 (262)
T cd05058 157 --HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR--------RLLQPEY 226 (262)
T ss_pred --cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC--------CCCCCCc
Confidence 112234567789999999888999999999999999999995 566653322 112222211 1111223
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.+..+.+++.+||..+|++||++. .++..|+.+
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~~-~il~~l~~~ 259 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTFS-ELVSRIEQI 259 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHHH
Confidence 456899999999999999999998 677777765
No 208
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.3e-35 Score=314.86 Aligned_cols=242 Identities=26% Similarity=0.340 Sum_probs=198.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
++|.....||.|+||.||+|.+. +..||+|.+.... ......+.+|+.+++.++||||+++++++.+ ..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36788889999999999999885 7899999987654 3334568899999999999999999998844 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++... ++++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 9999999998653 6899999999999999999999987 99999999999999999999999999988764321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH--HhhcCccccccCCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~--~~~~~~~~~~~d~~~~~~~ 702 (816)
......|++.|+|||++.+..++.++|||||||++|+|+||+.||...+.... .+..+.. + ..+
T Consensus 154 ------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-----~---~~~ 219 (274)
T cd06609 154 ------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNP-----P---SLE 219 (274)
T ss_pred ------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCC-----C---CCc
Confidence 22445688999999999988899999999999999999999999965432211 1111111 1 111
Q ss_pred HH-HHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 703 TF-VARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 703 ~~-~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.. ++..+.+++.+||..+|.+||++.+.+.
T Consensus 220 ~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 GNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 11 5567999999999999999999986554
No 209
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-36 Score=327.71 Aligned_cols=247 Identities=27% Similarity=0.406 Sum_probs=204.8
Q ss_pred eeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccCC--ccceeeccCCCchhh
Q 003481 477 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQD 552 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~--~~lV~E~~~~gsL~~ 552 (816)
.||+|.||+||-|++. ...+|||-+.........-+..|+.+-++|+|.|||+++|.|.++ .-+.||.++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 5999999999999987 456899998777666666788999999999999999999999655 447999999999999
Q ss_pred hhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEec-CCCCeeEeecccceeccCCCCcCCCc
Q 003481 553 RLFRKSNVSPL--LWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD-SELSSKICDFGICRLVTEDTLYLPSF 629 (816)
Q Consensus 553 ~l~~~~~~~~l--~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~-~~~~vkL~DFGla~~~~~~~~~~~~~ 629 (816)
+|...= .++ .+..+-.+..||+.||.|||.+. |||||||-+|||++ -.|.+||+|||.++.+..-..
T Consensus 662 LLrskW--GPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP----- 731 (1226)
T KOG4279|consen 662 LLRSKW--GPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP----- 731 (1226)
T ss_pred HHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCCc-----
Confidence 996543 355 77888889999999999999998 99999999999995 578999999999998754332
Q ss_pred cccCCCCCCCCCCCccccccC--CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH-HhhcCccccccCCCCCCCCHHHH
Q 003481 630 HRSTAPKGSFPYADPEYHRTG--VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR-AVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 630 ~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
.+....||..|||||++..+ .|+.++|||||||++.||.||++||...+.... .+.-|.+. ..++.|.+.+
T Consensus 732 -~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyK-----vHP~iPeels 805 (1226)
T KOG4279|consen 732 -CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYK-----VHPPIPEELS 805 (1226)
T ss_pred -cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhccee-----cCCCCcHHHH
Confidence 23566799999999999765 689999999999999999999999964333222 22333322 2356789999
Q ss_pred HHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 707 RRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
.....+|++|+.++|.+||++.+.|.+.+-+-.
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 999999999999999999999988877775443
No 210
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.3e-35 Score=315.64 Aligned_cols=260 Identities=25% Similarity=0.387 Sum_probs=198.3
Q ss_pred cCCCccceeeeecceEEEEEEE------cCeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEM------LGRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 538 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~------~g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~ 538 (816)
..|.+.+.||+|+||.||++.+ .+..||+|.+.... ......+.+|+.++++++||||+++++++.+ ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3578889999999999999974 26789999987553 2334578999999999999999999998843 37
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++||||+++++|.+++.... ..++|..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 89999999999999986543 35899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh---cCc------
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS---CGK------ 689 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~---~~~------ 689 (816)
........ .......++..|+|||++.+..++.++|||||||++|+|+|+..|+........... .+.
T Consensus 159 ~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 159 IETDKEYY---TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred cccCccce---eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 65432110 112344577789999999888899999999999999999998776532111000000 000
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 690 LSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 690 ~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
...+.+......+..++..+.+|+.+||+.+|.+||++. .++..|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQ-NLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHH-HHHHHHHhh
Confidence 000000001111233567899999999999999999998 666666653
No 211
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-36 Score=324.10 Aligned_cols=249 Identities=28% Similarity=0.447 Sum_probs=211.7
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 546 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~ 546 (816)
+..-.++||.|.||.||.|.|. .-.||||.++.+.+ ...+|..|..+|+.++|||+|+|+|+|.. .+|||.|||.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 4455678999999999999997 67899999976554 46789999999999999999999999954 4899999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+|+|.++|...+. ..++--..+.++.||..|+.||...+ +|||||...|+|+.++..+|++|||+++++..+....
T Consensus 347 yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA 422 (1157)
T KOG4278|consen 347 YGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA 422 (1157)
T ss_pred CccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence 9999999988764 45777778899999999999999988 9999999999999999999999999999987665321
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcCccccccCCCCCCCCH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
.....-.+-|.|||-+....++.|+|||+|||+|||+.| |..||...+ ++..++..|... +.|.
T Consensus 423 -----HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM--------~~Pe 489 (1157)
T KOG4278|consen 423 -----HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM--------DGPE 489 (1157)
T ss_pred -----ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc--------cCCC
Confidence 122334567999999999999999999999999999999 889997544 566666665432 3466
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.+++.+.+|++.||+++|.+||+++ ++-..|+.+
T Consensus 490 GCPpkVYeLMraCW~WsPsDRPsFa-eiHqafEtm 523 (1157)
T KOG4278|consen 490 GCPPKVYELMRACWNWSPSDRPSFA-EIHQAFETM 523 (1157)
T ss_pred CCCHHHHHHHHHHhcCCcccCccHH-HHHHHHHHH
Confidence 6778999999999999999999999 677777766
No 212
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5e-35 Score=318.42 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=195.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
++|.+.+.||+|+||.||++.+. +..||+|.+..... .....+.+|++++.+++||||++++++|. +..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46889999999999999999885 77899998865432 23456889999999999999999999984 458999999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++... ..+++..+..++.|++.||.|||+.. +++|+||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 9999999999765 35889999999999999999999842 39999999999999999999999999987653321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccC-------
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILD------- 695 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d------- 695 (816)
.....|++.|+|||++.+..++.++|||||||++|+|++|+.||....... ..+.. .......
T Consensus 155 -------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 226 (308)
T cd06615 155 -------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGR-PVSEGEAKESHRPV 226 (308)
T ss_pred -------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcC-ccccccccCCcccc
Confidence 234568999999999988889999999999999999999999985332211 11100 0000000
Q ss_pred ----------------------CCCCCCC-HHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 696 ----------------------PLAGDWP-TFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 696 ----------------------~~~~~~~-~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
......| ..++..+.+|+.+||..+|++||++.+.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000001 12456799999999999999999998655433
No 213
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=310.27 Aligned_cols=254 Identities=24% Similarity=0.331 Sum_probs=197.7
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCc-eeeEeccccC--------
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPH-LVTLLGACPE-------- 536 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~Hpn-Iv~l~g~~~~-------- 536 (816)
..|...++||+|.||+||+|+.. |+.||+|+++..... ......+|+.+|..|+|+| ||.|++++..
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34666678999999999999885 889999999776542 2234679999999999999 9999999832
Q ss_pred CccceeeccCCCchhhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNV-SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 615 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGl 615 (816)
..++|+||++ .+|..++...... ..++...+..++.||+.||+|||+++ |+||||||.||||+.+|.+||+|||+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccch
Confidence 4679999995 4899998766532 34667889999999999999999998 99999999999999999999999999
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCc-----
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK----- 689 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~----- 689 (816)
|+...-... ..+..++|..|.|||++.+. .|++..||||+|||+.||+++++.|....+..+......
T Consensus 167 Ara~~ip~~------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP 240 (323)
T KOG0594|consen 167 ARAFSIPMR------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTP 240 (323)
T ss_pred HHHhcCCcc------cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 997653321 24566799999999988776 799999999999999999999999976665444322111
Q ss_pred ----ccccc---C--CCCCCCC--H----H---HHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 690 ----LSSIL---D--PLAGDWP--T----F---VARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 690 ----~~~~~---d--~~~~~~~--~----~---~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+..+. + +....|+ . . ......+++.+||+.+|.+|.++..+|.+
T Consensus 241 ~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 241 NEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11100 0 0011111 1 1 12378999999999999999999965543
No 214
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9.2e-35 Score=306.73 Aligned_cols=244 Identities=24% Similarity=0.298 Sum_probs=199.5
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC---Cccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE---AWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~---~~~lV~E 543 (816)
+|.+.+.||.|++|.||++... +..||+|.+..... .....+.+|+.++++++|||++++++.+.. ..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999875 78899999865432 334568899999999999999999988742 2689999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++++|.+++.... ...+++.+++.++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999987643 246899999999999999999999988 9999999999999999999999999998764322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~ 701 (816)
. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...+.. ...+..+.+ ...
T Consensus 157 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--------~~~ 222 (257)
T cd08223 157 D------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL--------PPM 222 (257)
T ss_pred C------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--------CCC
Confidence 1 223456899999999999999999999999999999999999999644321 112222222 122
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
+...+..+.+++.+||+.+|.+||++.+.+.
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 223 PKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 3446678999999999999999999986553
No 215
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.1e-35 Score=312.10 Aligned_cols=253 Identities=26% Similarity=0.431 Sum_probs=197.6
Q ss_pred CCCccceeeeecceEEEEEEEc--C---eEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--G---RTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g---~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
+|...+.||+|+||.||+|.+. + ..||||.+.... ......|..|+.++..++||||+++++++.+ ..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 4677889999999999999875 3 369999987543 3345679999999999999999999999844 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 85 EFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999986543 45899999999999999999999987 999999999999999999999999998866443
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~ 699 (816)
... ...........+..|+|||++.+..++.++|||||||++|||++ |..||..... ....+..+. ..
T Consensus 160 ~~~-~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~--------~~ 230 (269)
T cd05065 160 TSD-PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY--------RL 230 (269)
T ss_pred ccc-cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC--------cC
Confidence 211 01111111122457999999999999999999999999999887 9999964332 222221110 01
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
..+...+..+.+++.+||..+|.+||++. .+...|+.+
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~~ 268 (269)
T cd05065 231 PPPMDCPTALHQLMLDCWQKDRNARPKFG-QIVSTLDKM 268 (269)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHhh
Confidence 11223456789999999999999999998 666667653
No 216
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.6e-35 Score=309.06 Aligned_cols=250 Identities=28% Similarity=0.444 Sum_probs=201.7
Q ss_pred hcCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC-CccceeeccC
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLP 546 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~E~~~ 546 (816)
..+|...++||+|+||.||++.+. +..+|+|.+.... .....|.+|+.++++++|+||+++++++.+ ..+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~ 83 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA 83 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC
Confidence 357888899999999999999875 6679999886543 234578899999999999999999998754 4789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.........
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 158 (260)
T cd05073 84 KGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT- 158 (260)
T ss_pred CCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-
Confidence 9999999976432 45889999999999999999999987 999999999999999999999999999876543211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......++..|+|||++..+.++.++|||||||++|+++| |..||..... ....+..+... ..+.
T Consensus 159 ----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 226 (260)
T cd05073 159 ----AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM--------PRPE 226 (260)
T ss_pred ----cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC--------CCcc
Confidence 1223346678999999998889999999999999999999 9999964332 22222222111 1123
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
..+..+.+++.+||+.+|.+||++. .+...|+.
T Consensus 227 ~~~~~~~~~i~~~l~~~p~~Rp~~~-~l~~~L~~ 259 (260)
T cd05073 227 NCPEELYNIMMRCWKNRPEERPTFE-YIQSVLDD 259 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHH-HHHHHHhc
Confidence 3456899999999999999999998 77777764
No 217
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.4e-35 Score=308.85 Aligned_cols=250 Identities=34% Similarity=0.498 Sum_probs=201.9
Q ss_pred hcCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
.++|.+.+.||.|+||.||++.+. +..||||.+.... .....+.+|+.++++++||||+++++++.. ..++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 467888999999999999999876 5779999987544 345678999999999999999999999853 588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++..... ..+++..+..|+.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (261)
T cd05034 84 SKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY- 158 (261)
T ss_pred CCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh-
Confidence 99999999976432 45899999999999999999999988 99999999999999999999999999987654221
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~ 702 (816)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... ....+..+. ....+
T Consensus 159 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~~ 226 (261)
T cd05034 159 ----TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY--------RMPRP 226 (261)
T ss_pred ----hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--------CCCCC
Confidence 11122335678999999998889999999999999999999 9999964332 222221111 01112
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
...+..+.+++.+||..+|.+||++. .+...|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rp~~~-~l~~~l~~ 260 (261)
T cd05034 227 PNCPEELYDLMLQCWDKDPEERPTFE-YLQSFLED 260 (261)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHH-HHHHHHhc
Confidence 22356899999999999999999998 67777764
No 218
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4e-35 Score=322.59 Aligned_cols=250 Identities=25% Similarity=0.271 Sum_probs=191.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|.+.+.||+|+||.||+++.. ++.||+|++..... .....|.+|+.++..++||||++++++|.+ ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888999999999999999885 78999999865321 233458899999999999999999998844 589999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999996543 35888999999999999999999988 999999999999999999999999999776543
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-----CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILD 695 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d 695 (816)
... ......||+.|+|||++.. +.++.++|||||||++|+|++|+.||....... ..+..... .+.
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~--~~~ 228 (331)
T cd05597 156 GTV-----QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE--HFQ 228 (331)
T ss_pred CCc-----cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCC--ccc
Confidence 211 1233469999999998863 457889999999999999999999996543221 11111110 000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCC--CCCCCChHHHHH
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYG--RERPDITPSLVK 733 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP--~~RPs~~e~l~~ 733 (816)
........+..+.+|+.+|+..++ ..||++.+.+.+
T Consensus 229 --~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 --FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred --CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 011111245678888988776533 337777755544
No 219
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.2e-35 Score=318.01 Aligned_cols=255 Identities=27% Similarity=0.442 Sum_probs=201.8
Q ss_pred cCCCccceeeeecceEEEEEEEc---------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE-- 536 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~---------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-- 536 (816)
.+|.+.+.||+|+||.||+++.. ...||+|.+..... .....+.+|+.++.++ +||||++++++|.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46788899999999999999752 35699999875432 3345688999999999 69999999998853
Q ss_pred CccceeeccCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEec
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD 603 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~ 603 (816)
..++||||+++|+|.+++..... ...++|..+..++.||+.||.|||+.+ |+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence 47899999999999999965421 235899999999999999999999987 99999999999999
Q ss_pred CCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--H
Q 003481 604 SELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--E 680 (816)
Q Consensus 604 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~ 680 (816)
.++.+||+|||+++......... ......++..|+|||++.++.++.++|||||||++|+|++ |..||.... .
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYK----KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred CCCcEEEcccccccccccccccc----ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999998765322110 1122234568999999988899999999999999999999 889986432 2
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 681 VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 681 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
....+..+.. ...+...+..+.+|+.+||..+|.+||++. .+...|+.+..
T Consensus 245 ~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~ll~~l~~~~~ 295 (314)
T cd05099 245 LFKLLREGHR--------MDKPSNCTHELYMLMRECWHAVPTQRPTFK-QLVEALDKVLA 295 (314)
T ss_pred HHHHHHcCCC--------CCCCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHHHHH
Confidence 2333332221 112333456888999999999999999998 67788887754
No 220
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.4e-35 Score=314.25 Aligned_cols=246 Identities=27% Similarity=0.378 Sum_probs=198.1
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
.|...+.||.|+||.||+|.+. +..||+|.+..... .....+.+|+.++++++||||++++++|.. ..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3556678999999999999875 78899999875432 334568899999999999999999999843 489999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06642 85 GGGSALDLLKP----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcch-
Confidence 99999998853 35889999999999999999999987 99999999999999999999999999877653221
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||........... +........+...
T Consensus 157 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~------~~~~~~~~~~~~~ 225 (277)
T cd06642 157 -----KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL------IPKNSPPTLEGQY 225 (277)
T ss_pred -----hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh------hhcCCCCCCCccc
Confidence 12334688999999999988999999999999999999999999864332111110 0111112233345
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+..+.+++.+||+.+|.+||++.+.+.+.+
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 226 SKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 678999999999999999999997776553
No 221
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2e-35 Score=328.73 Aligned_cols=246 Identities=24% Similarity=0.341 Sum_probs=191.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||+|+||.||++... +..||||++..... .....+.+|+.++..++||||+++++++.+ ..+|||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999885 78999999975322 233467889999999999999999998854 479999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999987543 5888999999999999999999988 999999999999999999999999998755321
Q ss_pred CCcC-----------------------------CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCC
Q 003481 623 TLYL-----------------------------PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL 673 (816)
Q Consensus 623 ~~~~-----------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~ 673 (816)
.... ..........||+.|+|||++.+..++.++|||||||++|||+||+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 1000 00001124579999999999999999999999999999999999999
Q ss_pred CCCChHHH--HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 674 PVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 674 Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
||...... ...+..... .+.-+. . ...+..+.+|+.+|+. ||.+|++.
T Consensus 235 Pf~~~~~~~~~~~i~~~~~-~~~~p~--~--~~~s~~~~~li~~l~~-~p~~R~~~ 284 (360)
T cd05627 235 PFCSETPQETYRKVMNWKE-TLVFPP--E--VPISEKAKDLILRFCT-DSENRIGS 284 (360)
T ss_pred CCCCCCHHHHHHHHHcCCC-ceecCC--C--CCCCHHHHHHHHHhcc-ChhhcCCC
Confidence 99644332 122211110 000010 0 1145678889988774 99999975
No 222
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.6e-35 Score=314.74 Aligned_cols=256 Identities=26% Similarity=0.364 Sum_probs=202.5
Q ss_pred cCHHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEecccc-
Q 003481 460 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACP- 535 (816)
Q Consensus 460 ~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~- 535 (816)
.++.++....+.|+....||.|+||.||+|.+. +..||+|++.... .....+..|+.++.++ +||||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 456777778899999999999999999999985 7899999986543 2345688899999999 7999999999873
Q ss_pred -------CCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 536 -------EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 536 -------~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
+..+++|||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+|+||+|+||+++.++.+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCE
Confidence 246899999999999998865432 45888889999999999999999988 9999999999999999999
Q ss_pred eEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH
Q 003481 609 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR 683 (816)
Q Consensus 609 kL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~ 683 (816)
+|+|||++....... .......|++.|+|||.+. ...++.++|||||||++|+|++|..||........
T Consensus 161 ~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~ 234 (282)
T cd06636 161 KLVDFGVSAQLDRTV------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA 234 (282)
T ss_pred EEeeCcchhhhhccc------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh
Confidence 999999987654221 1123456899999999875 34678899999999999999999999964433222
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 684 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 684 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...... ...+ ......++..+.+|+.+||+.||.+||++.+.+
T Consensus 235 ~~~~~~---~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell 277 (282)
T cd06636 235 LFLIPR---NPPP--KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLL 277 (282)
T ss_pred hhhHhh---CCCC--CCcccccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence 211110 0001 111223556899999999999999999998544
No 223
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.6e-35 Score=319.71 Aligned_cols=193 Identities=26% Similarity=0.356 Sum_probs=157.4
Q ss_pred cceeeeecceEEEEEEEc----CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC----CccceeeccC
Q 003481 475 SFKVGQGGFGCVYKGEML----GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVYEYLP 546 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~----g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~lV~E~~~ 546 (816)
..+||+|+||.||+|+.. +..||+|.+.... ....+.+|+.+|++++||||+++++++.. ..++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 5789999986543 23457789999999999999999998732 3689999985
Q ss_pred CCchhhhhhhcC------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe----cCCCCeeEeecccc
Q 003481 547 NGSLQDRLFRKS------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL----DSELSSKICDFGIC 616 (816)
Q Consensus 547 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl----~~~~~vkL~DFGla 616 (816)
++|.+++.... ....+++..+..|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 57877765321 1235889999999999999999999988 9999999999999 45678999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCC
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVG 676 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~ 676 (816)
+........ ........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.
T Consensus 160 ~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 160 RLFNSPLKP---LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eccCCCCcc---ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 876533211 112345678999999998876 458999999999999999999999995
No 224
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.7e-35 Score=317.02 Aligned_cols=249 Identities=21% Similarity=0.307 Sum_probs=198.0
Q ss_pred CccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCC
Q 003481 473 SESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNG 548 (816)
Q Consensus 473 ~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~g 548 (816)
.....||.|+||.||++... +..||||.+..........+.+|+.++..++||||+++++.+. +..++||||++++
T Consensus 25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~ 104 (292)
T cd06658 25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG 104 (292)
T ss_pred hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence 33456999999999999874 7899999987655555667889999999999999999999874 4589999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCC
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 628 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 628 (816)
+|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++........
T Consensus 105 ~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~---- 173 (292)
T cd06658 105 ALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP---- 173 (292)
T ss_pred cHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc----
Confidence 99998743 24889999999999999999999987 99999999999999999999999999876543221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHH
Q 003481 629 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARR 708 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 708 (816)
......|++.|+|||++.+..++.++||||||+++|||++|+.||........... +...+.+... .....+..
T Consensus 174 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~ 247 (292)
T cd06658 174 --KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR---IRDNLPPRVK-DSHKVSSV 247 (292)
T ss_pred --cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCCccc-cccccCHH
Confidence 12345689999999999888899999999999999999999999965433211111 0111111111 11234567
Q ss_pred HHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 709 LVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 709 l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
+.+++.+||..||.+||++.+.+.+.+-..
T Consensus 248 ~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 248 LRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred HHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 889999999999999999997776655443
No 225
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.7e-35 Score=318.15 Aligned_cols=251 Identities=23% Similarity=0.314 Sum_probs=192.7
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
++|...+.||.|+||.||+|.+. +..||+|.+..... .....+.+|+.++..++||||+++++++. +..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888899999999999999885 78899999865433 23346778999999999999999999984 357899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
++ ++|.+++.... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 97 58888886543 35889999999999999999999988 99999999999999999999999999876543221
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hh-------cCcccccc
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VS-------CGKLSSIL 694 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~-------~~~~~~~~ 694 (816)
......+++.|+|||++.+ ..++.++|||||||++|+|+||++||...+..... +. ...+..++
T Consensus 160 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 160 ------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred ------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 1233457899999998765 45788999999999999999999999643321110 00 00000000
Q ss_pred C---------CC-----CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 695 D---------PL-----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 695 d---------~~-----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
. +. ........+..+.+||.+||+.||.+|||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0 00 00011234567899999999999999999986553
No 226
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.7e-35 Score=309.37 Aligned_cols=247 Identities=27% Similarity=0.384 Sum_probs=186.9
Q ss_pred eeeeecceEEEEEEEc----CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCc
Q 003481 477 KVGQGGFGCVYKGEML----GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 549 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~----g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gs 549 (816)
.||+|+||.||+|.+. +..+|+|.+..... .....|.+|+.++.+++||||++++|+|.+ ..++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 5899999999999864 35799998866543 334578899999999999999999999854 4789999999999
Q ss_pred hhhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 550 LQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 550 L~~~l~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|.+++..... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~-- 156 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY-- 156 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCccee--
Confidence 9999975432 234677888899999999999999987 999999999999999999999999998764433211
Q ss_pred CccccCCCCCCCCCCCccccccC-------CCCcchhHhHHHHHHHHHHh-CCCCCCChHHHH--HHhhcCccccccCCC
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTG-------VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVR--RAVSCGKLSSILDPL 697 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~-------~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~--~~~~~~~~~~~~d~~ 697 (816)
.......++..|+|||++... .++.++||||||+++|||++ |..||....... .....+......++
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 233 (269)
T cd05087 157 --VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKP- 233 (269)
T ss_pred --ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCC-
Confidence 112344578889999987532 35789999999999999996 999996433221 11111111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
......+..+.+++..|+ .+|.+||++. +|...|
T Consensus 234 --~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~-~l~~~l 267 (269)
T cd05087 234 --RLKLPLSDRWYEVMQFCW-LQPEQRPSAE-EVHLLL 267 (269)
T ss_pred --ccCCCCChHHHHHHHHHh-cCcccCCCHH-HHHHHh
Confidence 112224456888999998 6899999999 555544
No 227
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=8.6e-35 Score=310.07 Aligned_cols=243 Identities=29% Similarity=0.456 Sum_probs=190.4
Q ss_pred eeeeecceEEEEEEEc--Ce--EEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEeccccC--CccceeeccCCC
Q 003481 477 KVGQGGFGCVYKGEML--GR--TVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPNG 548 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~--g~--~vAiK~l~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~E~~~~g 548 (816)
.||+|+||.||+|.+. +. .+++|.+.... ......+.+|+.++.++ +||||++++++|.. ..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 5899999999999875 33 57888887433 23445788999999999 89999999999854 478999999999
Q ss_pred chhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccc
Q 003481 549 SLQDRLFRKS-------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 615 (816)
Q Consensus 549 sL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGl 615 (816)
+|.+++.... ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCCC
Confidence 9999986532 1235889999999999999999999977 99999999999999999999999999
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCcccc
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSS 692 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~ 692 (816)
+....... .......++.|+|||++....++.++|||||||++|+|++ |..||..... ....+..+.
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~--- 228 (270)
T cd05047 159 SRGQEVYV-------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--- 228 (270)
T ss_pred ccccchhh-------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC---
Confidence 86332111 1122234667999999988899999999999999999997 9999954322 222221111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 693 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 693 ~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
....+...+..+.+|+.+||..+|.+||++. +++..|+.+
T Consensus 229 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~il~~l~~~ 268 (270)
T cd05047 229 -----RLEKPLNCDDEVYDLMRQCWREKPYERPSFA-QILVSLNRM 268 (270)
T ss_pred -----CCCCCCcCCHHHHHHHHHHcccChhhCCCHH-HHHHHHHHh
Confidence 1112223456789999999999999999999 666676654
No 228
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=7.2e-35 Score=314.05 Aligned_cols=258 Identities=26% Similarity=0.306 Sum_probs=205.0
Q ss_pred ccCHHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEecccc
Q 003481 459 EFSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACP 535 (816)
Q Consensus 459 ~~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~ 535 (816)
.+.+.++..++++|.....||+|+||.||++... ++.+|+|++.... .....+.+|+.++.++ +||||++++++|.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3666788888999999999999999999999884 7899999986543 2345678899999999 8999999999873
Q ss_pred -------CCccceeeccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCC
Q 003481 536 -------EAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 607 (816)
Q Consensus 536 -------~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~ 607 (816)
+..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCC
Confidence 23789999999999999886421 2346899999999999999999999987 999999999999999999
Q ss_pred eeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccC-----CCCcchhHhHHHHHHHHHHhCCCCCCChHHHH
Q 003481 608 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR 682 (816)
Q Consensus 608 vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~ 682 (816)
+||+|||++........ ......|+..|+|||++... .++.++|||||||++|+|++|+.||.......
T Consensus 167 ~kl~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~ 240 (291)
T cd06639 167 VKLVDFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK 240 (291)
T ss_pred EEEeecccchhcccccc------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH
Confidence 99999999887643221 12345689999999987643 36889999999999999999999997544322
Q ss_pred HHh--hcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 683 RAV--SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 683 ~~~--~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
... ..+....+ ..+......+.+||.+||+.+|.+||++.+.+.
T Consensus 241 ~~~~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 TLFKIPRNPPPTL------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHhcCCCCCC------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 221 11111111 112334567999999999999999999996554
No 229
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-34 Score=318.43 Aligned_cols=255 Identities=27% Similarity=0.452 Sum_probs=201.7
Q ss_pred cCCCccceeeeecceEEEEEEEc---------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE-- 536 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~---------g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-- 536 (816)
.+|.+.+.||+|+||.||++... +..||+|.+..... .....+.+|+.++.++ +||||++++++|.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999753 23689998875432 2345788999999999 89999999999854
Q ss_pred CccceeeccCCCchhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEec
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKS-------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD 603 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~ 603 (816)
..++||||+++|+|.+++.... ....++|..++.++.|++.||.|||+.+ |+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence 4789999999999999987532 1235889999999999999999999987 99999999999999
Q ss_pred CCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--H
Q 003481 604 SELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--E 680 (816)
Q Consensus 604 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~ 680 (816)
.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.... .
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYY----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred CCCcEEECCcccceeccccccc----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999876433211 11223345678999999998899999999999999999998 889986433 2
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 681 VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 681 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
....+..+.. ...+...+..+.+|+.+||+.+|.+||++. +++..|+.+..
T Consensus 245 ~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-ell~~l~~~~~ 295 (334)
T cd05100 245 LFKLLKEGHR--------MDKPANCTHELYMIMRECWHAVPSQRPTFK-QLVEDLDRVLT 295 (334)
T ss_pred HHHHHHcCCC--------CCCCCCCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHhh
Confidence 2222222211 122333456899999999999999999998 67777877654
No 230
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-35 Score=333.13 Aligned_cols=250 Identities=19% Similarity=0.236 Sum_probs=192.1
Q ss_pred hcCCCccceeeeecceEEEEEEEc----CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcccee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML----GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~----g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~ 542 (816)
..+|.+...||.|+||.||++... +..||+|.+... ..+.+|+.+|.+++||||+++++++. ...++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 357999999999999999999764 467999987643 23568999999999999999999884 3588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
|++. ++|.+++... ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 166 e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 166 PKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred hhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9995 6888888432 46899999999999999999999987 999999999999999999999999999866543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH------HHHHHhhc---Ccc---
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG------EVRRAVSC---GKL--- 690 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~------~~~~~~~~---~~~--- 690 (816)
... .......||+.|+|||++....++.++|||||||+||||++|+.||.... .....+.. ...
T Consensus 239 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 239 PDT----PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred ccc----ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 211 12235679999999999999999999999999999999999999985321 11111100 000
Q ss_pred -----------ccccCCCCCC--CC-----HHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 691 -----------SSILDPLAGD--WP-----TFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 691 -----------~~~~d~~~~~--~~-----~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.......... .+ ...+..+.++|.+||..||.+||++.+.+.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0000000000 01 12345788999999999999999999766543
No 231
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=335.60 Aligned_cols=252 Identities=27% Similarity=0.435 Sum_probs=210.9
Q ss_pred CCccceeeeecceEEEEEEEc--C---eEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 472 FSESFKVGQGGFGCVYKGEML--G---RTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g---~~vAiK~l~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
..+.+.||.|-||.|++|++. | ..||||.|+...... +.+|+.|..||.++.||||++|.|+... ..+||.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 346778999999999999986 3 569999998876543 4579999999999999999999999854 4789999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
||+||+|+.+|..+. ..+++-+...++++||.|+.||-+++ +|||||...|||++.|..+|++|||+++.+.++.
T Consensus 711 yMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 711 YMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 999999999998876 45999999999999999999999998 9999999999999999999999999999876554
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCC--hHHHHHHhhcCccccccCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGL--AGEVRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~--~~~~~~~~~~~~~~~~~d~~~~~ 700 (816)
. ..+......-...|.|||.+...++|.+||||||||+|||.++ |..||-. ..++...+..|... .
T Consensus 786 ~---~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRL--------P 854 (996)
T KOG0196|consen 786 E---AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRL--------P 854 (996)
T ss_pred C---ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCC--------C
Confidence 1 2222233333567999999999999999999999999999888 9999853 33455666655321 2
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
-|.+++..|.+|++.||++|..+||.+. .|+..|+.+-.
T Consensus 855 pPmDCP~aL~qLMldCWqkdR~~RP~F~-qiV~~lDklIr 893 (996)
T KOG0196|consen 855 PPMDCPAALYQLMLDCWQKDRNRRPKFA-QIVSTLDKLIR 893 (996)
T ss_pred CCCCCcHHHHHHHHHHHHHHhhcCCCHH-HHHHHHHHHhc
Confidence 2455677999999999999999999999 67788887743
No 232
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1e-34 Score=308.76 Aligned_cols=248 Identities=26% Similarity=0.380 Sum_probs=196.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-----ccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-----QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 538 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-----~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~ 538 (816)
.+|...+.||+|+||.||+|... +..|++|.+..... .....+.+|+.++++++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47899999999999999999874 78999999865432 123458899999999999999999998743 36
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++++||+++++|.+++.... .+++..++.++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 78999999999999986543 4889999999999999999999987 99999999999999999999999999876
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCC
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~ 698 (816)
........ .......++..|+|||++.+..++.++|||||||++|+|++|+.||............. ..+..
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~-----~~~~~ 227 (266)
T cd06651 156 LQTICMSG---TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIA-----TQPTN 227 (266)
T ss_pred cccccccC---CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHh-----cCCCC
Confidence 54321110 01123458899999999998889999999999999999999999997543322211111 11112
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
..++......+..++ +||..+|.+||++.+.+.
T Consensus 228 ~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 228 PQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 334555666777887 788899999999996554
No 233
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.4e-34 Score=309.94 Aligned_cols=252 Identities=27% Similarity=0.448 Sum_probs=201.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--C----eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc-CCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--G----RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g----~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~lV 541 (816)
.+|...+.||+|+||.||+|.+. | ..||+|.+..... .....+.+|+.++.+++||||++++++|. ...++|
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 45777889999999999999864 3 2689998876543 23457889999999999999999999884 458899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++|+|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 87 TQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 99999999999987654 35899999999999999999999977 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~~d~~~ 698 (816)
..... ......++..|+|||.+....++.++|||||||++|||++ |+.||.... .+...+..+...
T Consensus 162 ~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------- 230 (279)
T cd05057 162 DEKEY----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL------- 230 (279)
T ss_pred cccce----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC-------
Confidence 33211 1122334678999999988889999999999999999999 999997533 223333322111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
..+...+..+.+++.+||..+|..||++. .+...|+.+.
T Consensus 231 -~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~-~l~~~l~~~~ 269 (279)
T cd05057 231 -PQPPICTIDVYMVLVKCWMIDAESRPTFK-ELINEFSKMA 269 (279)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHHHH
Confidence 11222445789999999999999999999 6888888763
No 234
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.2e-35 Score=312.85 Aligned_cols=229 Identities=24% Similarity=0.368 Sum_probs=179.9
Q ss_pred eeeeecceEEEEEEEc--------------------------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeE
Q 003481 477 KVGQGGFGCVYKGEML--------------------------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 530 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~--------------------------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l 530 (816)
+||+|+||.||+|.+. ...|++|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999999752 13589999876554445578899999999999999999
Q ss_pred eccccC--CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC--
Q 003481 531 LGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-- 606 (816)
Q Consensus 531 ~g~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-- 606 (816)
+|+|.+ ..++||||+++|+|..++.... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence 999844 4789999999999999886543 36889999999999999999999977 99999999999997644
Q ss_pred -----CeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHH-hCCCCCCChH
Q 003481 607 -----SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLL-TGRLPVGLAG 679 (816)
Q Consensus 607 -----~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~ell-tG~~Pf~~~~ 679 (816)
.+||+|||++...... ....++..|+|||++.+ ..++.++|||||||++|||+ +|..||....
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred cCccceeeecCCccccccccc----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 3899999987644221 22357888999998865 56899999999999999995 6999986432
Q ss_pred HH--HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHH
Q 003481 680 EV--RRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPS 730 (816)
Q Consensus 680 ~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~ 730 (816)
.. ....... ...+......+.+++.+||+.+|.+||++.+.
T Consensus 227 ~~~~~~~~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i 269 (274)
T cd05076 227 PSEKERFYEKK----------HRLPEPSCKELATLISQCLTYEPTQRPSFRTI 269 (274)
T ss_pred hHHHHHHHHhc----------cCCCCCCChHHHHHHHHHcccChhhCcCHHHH
Confidence 21 1111110 01111223578999999999999999999843
No 235
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4e-35 Score=314.01 Aligned_cols=259 Identities=28% Similarity=0.440 Sum_probs=200.9
Q ss_pred CCCccceeeeecceEEEEEEEc------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC----Ccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWS 539 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~ 539 (816)
.|...+.||+|+||.||++++. +..||||++...... ....|.+|+.+++.++||||+++++++.. ..+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4667788999999999999864 578999999765543 45679999999999999999999998854 478
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
+||||+++++|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...
T Consensus 85 lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 9999999999999997644 35899999999999999999999987 999999999999999999999999999877
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHh--------hcCccc
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--------SCGKLS 691 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~--------~~~~~~ 691 (816)
....... .......++..|++||++.+..++.++||||||+++|+|+||..|+.........+ ....+.
T Consensus 160 ~~~~~~~---~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 160 PEDKDYY---YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred ccCCcce---eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 6332110 11223345667999999988899999999999999999999999985322110000 000000
Q ss_pred cccCC-CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 692 SILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 692 ~~~d~-~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
..+.. .....+...+..+.+|+.+||+.+|.+||++. +++..|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFA-DLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHH-HHHHHHhhc
Confidence 00000 00111223446899999999999999999999 777777754
No 236
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.3e-34 Score=309.91 Aligned_cols=246 Identities=26% Similarity=0.363 Sum_probs=200.6
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
.|...+.||.|+||.||+|.+. +..||||++.... ......+.+|+.+++.++||||+++++++.+ ..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4677788999999999999874 7899999987543 2334578899999999999999999999853 589999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++|+|.+++.. .++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06640 85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-
Confidence 99999998854 35888999999999999999999987 99999999999999999999999999987654321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......++..|+|||++.+..++.++|||||||++|+|+||..||........... +........+...
T Consensus 157 -----~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~------~~~~~~~~~~~~~ 225 (277)
T cd06640 157 -----KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL------IPKNNPPTLTGEF 225 (277)
T ss_pred -----ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh------hhcCCCCCCchhh
Confidence 12344688899999999888899999999999999999999999964432211110 0001122344567
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+..+.+++.+||+.+|.+||++.+.+.+.+
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 226 SKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred hHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 788999999999999999999997665544
No 237
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=8.3e-35 Score=309.43 Aligned_cols=244 Identities=28% Similarity=0.453 Sum_probs=193.9
Q ss_pred eeeeecceEEEEEEEcC--------eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 477 KVGQGGFGCVYKGEMLG--------RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~g--------~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
.||+|+||.||+|+... ..||||.+..... .....|.+|+.+++.++||||++++++|. +..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 58999999999998742 5799998865432 34567889999999999999999999884 3588999999
Q ss_pred CCCchhhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC-----CeeEeecccc
Q 003481 546 PNGSLQDRLFRKS----NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-----SSKICDFGIC 616 (816)
Q Consensus 546 ~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-----~vkL~DFGla 616 (816)
++++|.+++.... ....++|..++.++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999997532 1234789999999999999999999987 99999999999999877 8999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHHH--HHHhhcCccccc
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLSSI 693 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~~~~~~~~~ 693 (816)
......... .......++..|+|||++.++.++.++|||||||++|+|+| |..||...... ...+..+.
T Consensus 159 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~---- 230 (269)
T cd05044 159 RDIYKSDYY----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG---- 230 (269)
T ss_pred ccccccccc----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC----
Confidence 866433211 11233456788999999999999999999999999999998 99998643322 12221111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 694 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 694 ~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
....+...+..+.+|+.+||..+|.+||++. .+.+.|+
T Consensus 231 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~ 268 (269)
T cd05044 231 ----RLQKPENCPDKIYQLMTNCWAQDPSERPTFD-RIQEILQ 268 (269)
T ss_pred ----ccCCcccchHHHHHHHHHHcCCCcccCCCHH-HHHHHHh
Confidence 1122334567899999999999999999999 6666654
No 238
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.2e-35 Score=312.45 Aligned_cols=235 Identities=25% Similarity=0.381 Sum_probs=185.0
Q ss_pred eeeeecceEEEEEEEc---------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 477 KVGQGGFGCVYKGEML---------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~---------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
.||.|+||.||+|... ...|++|.+..........|.+|+.++..++||||+++++++. +..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 5999999999999764 2348888886555445567889999999999999999999984 4688999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCC--------eeEeecccce
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS--------SKICDFGICR 617 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~--------vkL~DFGla~ 617 (816)
++|+|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. ++|+|||++.
T Consensus 82 ~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 82 KFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 9999999987654 35889999999999999999999987 999999999999987765 5899999876
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCC-CCCCChHHHHHHhhcCccccccC
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGR-LPVGLAGEVRRAVSCGKLSSILD 695 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~-~Pf~~~~~~~~~~~~~~~~~~~d 695 (816)
..... ....+++.|+|||++.+ ..++.++|||||||++|+|++|. .||..............
T Consensus 157 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~------ 220 (258)
T cd05078 157 TVLPK----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED------ 220 (258)
T ss_pred ccCCc----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc------
Confidence 54321 23457889999999876 45899999999999999999985 66654333211111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
....|......+.+|+.+||+.+|.+||++. ++++.|
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~il~~l 257 (258)
T cd05078 221 --RHQLPAPKWTELANLINQCMDYEPDFRPSFR-AIIRDL 257 (258)
T ss_pred --cccCCCCCcHHHHHHHHHHhccChhhCCCHH-HHHHhc
Confidence 1122323446789999999999999999999 455544
No 239
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=327.18 Aligned_cols=242 Identities=22% Similarity=0.356 Sum_probs=201.2
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccC----CcccHHHHHHHHHHHhcCCCCceeeEeccccC----Cccceeecc
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSH----NMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVYEYL 545 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~----~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~lV~E~~ 545 (816)
..||+|+|-+||+|.+. |-.||--.++.. ......+|..|+.+|+.|+|||||++|.++.+ ...+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 35999999999999886 666775433222 22344679999999999999999999998843 266899999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-CCeeEeecccceeccCCCC
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkL~DFGla~~~~~~~~ 624 (816)
..|+|..|+.+.. .++...+..|+.||+.||.|||++. +||||||||.+||||+.+ |.|||+|+|+|.......
T Consensus 126 TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~- 200 (632)
T KOG0584|consen 126 TSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH- 200 (632)
T ss_pred cCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhccc-
Confidence 9999999998876 4777999999999999999999998 589999999999999765 899999999999876533
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCC---ChHHHHHHhhcCccccccCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG---LAGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~---~~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
.....|||.|||||.+. ..|+..+||||||++++||+|+..||. ...++++.+..|.....+...
T Consensus 201 -------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV---- 268 (632)
T KOG0584|consen 201 -------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKV---- 268 (632)
T ss_pred -------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhcc----
Confidence 34578999999999887 679999999999999999999999995 556677777777655443322
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
-.+.+.++|.+||.. ..+||++.+.|.+.|-..
T Consensus 269 ---~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 269 ---KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred ---CCHHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 135789999999999 999999998887777543
No 240
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-34 Score=306.21 Aligned_cols=247 Identities=26% Similarity=0.329 Sum_probs=197.1
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-----ccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-----QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 538 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-----~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~ 538 (816)
.+|...+.||+|+||.||+|.+. +..||||.+..... .....+.+|+.++.+++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999875 78999998864321 123467889999999999999999998743 36
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++||||+++++|.+++.... .+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence 78999999999999987543 4788899999999999999999988 99999999999999999999999999886
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCC
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~ 698 (816)
........ .......|+..|+|||++.+..++.++|||||||++|+|++|+.||............ . ..+..
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-~----~~~~~ 227 (265)
T cd06652 156 LQTICLSG---TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKI-A----TQPTN 227 (265)
T ss_pred cccccccc---cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHH-h----cCCCC
Confidence 54321110 1123346889999999998888999999999999999999999999754332221111 0 11222
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...|...+..+.+++.+||. +|.+||++.+.+
T Consensus 228 ~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il 259 (265)
T cd06652 228 PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELL 259 (265)
T ss_pred CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHh
Confidence 33466677889999999995 999999998544
No 241
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1e-34 Score=314.38 Aligned_cols=242 Identities=24% Similarity=0.353 Sum_probs=194.3
Q ss_pred cceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCCch
Q 003481 475 SFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSL 550 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~gsL 550 (816)
...||.|+||.||++... +..||+|.+..........+.+|+.++..++||||++++++|. +..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 346999999999999874 8899999997655555667889999999999999999999874 458999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcc
Q 003481 551 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 630 (816)
Q Consensus 551 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 630 (816)
..++.. ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 106 ~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~------ 172 (297)
T cd06659 106 TDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------ 172 (297)
T ss_pred HHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccc------
Confidence 987744 34889999999999999999999988 99999999999999999999999999876543221
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 003481 631 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLV 710 (816)
Q Consensus 631 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~ 710 (816)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||................ .+. ...+...+..+.
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~l~ 248 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---PPK-LKNAHKISPVLR 248 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC---CCC-ccccCCCCHHHH
Confidence 1234568999999999998889999999999999999999999996444322211110000 000 011123456789
Q ss_pred HHHHHhhccCCCCCCCChHHHHH
Q 003481 711 DLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 711 ~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+++.+||+.+|.+||++.+.+.+
T Consensus 249 ~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 249 DFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHhcCCcccCcCHHHHhhC
Confidence 99999999999999999965554
No 242
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2e-34 Score=304.21 Aligned_cols=245 Identities=28% Similarity=0.532 Sum_probs=196.3
Q ss_pred cCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 546 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~ 546 (816)
.+|...+.||.|+||.||++.+. +..+|+|.+.... .....|.+|+.++++++||||+++++++.. ..++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 35777889999999999999886 7889999886543 234578999999999999999999999843 5789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+++|.+++.... ..+++..++.++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.........
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~- 156 (256)
T cd05112 83 HGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT- 156 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCccc-
Confidence 999999986543 35889999999999999999999988 999999999999999999999999999866433211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......++..|+|||++.++.++.++||||||+++|+|++ |..||..... ....+..+. .... +.
T Consensus 157 ----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~------~~ 224 (256)
T cd05112 157 ----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF--RLYK------PR 224 (256)
T ss_pred ----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC--CCCC------CC
Confidence 1123345678999999998899999999999999999998 9999964332 222222221 1111 12
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
..+..+.+|+.+||+.+|.+||++. ++++.
T Consensus 225 ~~~~~~~~l~~~~l~~~p~~Rp~~~-~~l~~ 254 (256)
T cd05112 225 LASQSVYELMQHCWKERPEDRPSFS-LLLHQ 254 (256)
T ss_pred CCCHHHHHHHHHHcccChhhCCCHH-HHHHh
Confidence 2346899999999999999999998 44443
No 243
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.2e-34 Score=308.54 Aligned_cols=247 Identities=28% Similarity=0.384 Sum_probs=185.6
Q ss_pred eeeeecceEEEEEEEc----CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCc
Q 003481 477 KVGQGGFGCVYKGEML----GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 549 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~----g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gs 549 (816)
.||+|+||.||+|... ...+++|.+..... .....|.+|+.+++.++||||++++++|.+ ..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 5899999999999753 35788898764432 234568899999999999999999998853 4889999999999
Q ss_pred hhhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 550 LQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 550 L~~~l~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|.+++..... ....++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 156 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY-- 156 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhe--
Confidence 9999976532 233567888999999999999999987 999999999999999999999999998764432211
Q ss_pred CccccCCCCCCCCCCCcccccc-------CCCCcchhHhHHHHHHHHHHh-CCCCCCChHHH--HHHhhcCccccccCCC
Q 003481 628 SFHRSTAPKGSFPYADPEYHRT-------GVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLSSILDPL 697 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~-------~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~~~~~~~~~~d~~ 697 (816)
.......+++.|+|||++.. ..++.++|||||||++|||++ |..||...... ...........+..
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-- 232 (269)
T cd05042 157 --ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK-- 232 (269)
T ss_pred --eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC--
Confidence 11233456778999998642 356889999999999999999 78888644321 11111111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
...+...+..+.+++..|| .||.+||++. +|.+.|
T Consensus 233 -~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~-~v~~~l 267 (269)
T cd05042 233 -PQLDLKYSDRWYEVMQFCW-LDPETRPTAE-EVHELL 267 (269)
T ss_pred -CcccccCCHHHHHHHHHHh-cCcccccCHH-HHHHHh
Confidence 2233345567788888888 5999999998 555544
No 244
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.7e-35 Score=325.37 Aligned_cols=238 Identities=25% Similarity=0.335 Sum_probs=186.4
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcC---CCCceeeEecccc--CCccceeeccCC
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKL---QHPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l---~HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
||+|+||.||+|++. +..||||++...... ....+..|..++.++ +||||+++++++. +..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999885 889999998654322 223455677777665 6999999999884 358999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--- 151 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--- 151 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC---
Confidence 99999886543 5889999999999999999999988 99999999999999999999999999875432221
Q ss_pred CccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCC-H
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP-T 703 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~-~ 703 (816)
......||+.|+|||++.+. .++.++|||||||++|+|+||+.||..... ....+..+... ++ .
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------~~~~ 219 (330)
T cd05586 152 ---TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR---------FPKN 219 (330)
T ss_pred ---CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC---------CCCc
Confidence 12345799999999988654 489999999999999999999999965432 22233322211 11 1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
..+..+.+|+.+||+.||.+||+..+.+.+.++
T Consensus 220 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 220 VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 245678899999999999999976544444443
No 245
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.5e-35 Score=321.01 Aligned_cols=250 Identities=25% Similarity=0.281 Sum_probs=192.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||+|+||.||++++. +..||+|++..... .....|.+|+.++..++|+||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999886 67899999864321 223357889999999999999999998843 588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999997643 35889999999999999999999988 999999999999999999999999999765432
Q ss_pred CCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILD 695 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d 695 (816)
.. .......||+.|+|||++. ...++.++|||||||+||||++|+.||....... ..+...... .
T Consensus 156 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~-- 227 (332)
T cd05623 156 GT-----VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER-F-- 227 (332)
T ss_pred Cc-----ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcc-c--
Confidence 21 1123457999999999885 3468899999999999999999999997543322 112111100 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCC--CCCChHHHHH
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYGRE--RPDITPSLVK 733 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~--RPs~~e~l~~ 733 (816)
.........+..+.+|+.+|+..++.. ||++.+.+.+
T Consensus 228 -~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 -QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 011112235678899999988654443 6777754443
No 246
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.1e-34 Score=316.34 Aligned_cols=193 Identities=25% Similarity=0.356 Sum_probs=157.0
Q ss_pred cceeeeecceEEEEEEEc----CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc----CCccceeeccC
Q 003481 475 SFKVGQGGFGCVYKGEML----GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWSLVYEYLP 546 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~----g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~----~~~~lV~E~~~ 546 (816)
..+||+|+||.||+|+.. +..||+|.+.... ....+.+|+.+|++++||||++++++|. ...++||||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999864 4689999986543 2345788999999999999999999873 24689999986
Q ss_pred CCchhhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe----cCCCCeeEeecccc
Q 003481 547 NGSLQDRLFRK------SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL----DSELSSKICDFGIC 616 (816)
Q Consensus 547 ~gsL~~~l~~~------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl----~~~~~vkL~DFGla 616 (816)
+ +|.+++... .....+++..+..|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 4 777766422 12235889999999999999999999987 9999999999999 56678999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCC
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVG 676 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~ 676 (816)
+........ ........||+.|+|||++.+ ..++.++|||||||++|||+||++||.
T Consensus 160 ~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 160 RLFNSPLKP---LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eccCCCccc---ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 876543211 112244578999999998876 458999999999999999999999995
No 247
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.7e-35 Score=313.31 Aligned_cols=248 Identities=25% Similarity=0.386 Sum_probs=195.6
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
++|+..+.||+|+||.||++... +..||+|++.... ......+.+|+.++..++||||+++++++. ...++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46777889999999999999886 8899999886543 234567899999999999999999999984 358899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++... ..+++..+..++.+++.||.|||+.. +++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 85 MDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred CCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 9999999988654 35899999999999999999999742 39999999999999999999999999987553221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH------HHHhhcCccccccCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV------RRAVSCGKLSSILDPLA 698 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~------~~~~~~~~~~~~~d~~~ 698 (816)
.....|+..|+|||++.+..++.++|||||||++|+|+||..||...... ...+. ..+..+.....
T Consensus 159 -------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 230 (284)
T cd06620 159 -------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGIL-DLLQQIVQEPP 230 (284)
T ss_pred -------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHH-HHHHHHhhccC
Confidence 13456899999999998889999999999999999999999999643221 00000 00111111111
Q ss_pred CCCCH-HHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 699 GDWPT-FVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 699 ~~~~~-~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...+. ..+..+.+|+.+||+.||.+||++.+.+
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~ 264 (284)
T cd06620 231 PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLC 264 (284)
T ss_pred CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 11222 2556899999999999999999998544
No 248
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.2e-34 Score=305.91 Aligned_cols=231 Identities=30% Similarity=0.460 Sum_probs=184.3
Q ss_pred eeeeecceEEEEEEEcCe------------EEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-CCccceee
Q 003481 477 KVGQGGFGCVYKGEMLGR------------TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYE 543 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~g~------------~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~lV~E 543 (816)
.||+|+||.||+|.+.+. .|++|.+...... ...|.+|+.++++++||||++++|+|. ...++|||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 80 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE 80 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence 699999999999988632 4888887654433 667899999999999999999999874 45789999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC-------CeeEeecccc
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-------SSKICDFGIC 616 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-------~vkL~DFGla 616 (816)
|+++|+|.+++..... .+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 81 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 81 YVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred cCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999999876542 6889999999999999999999987 99999999999999887 7999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccC--CCCcchhHhHHHHHHHHHHh-CCCCCCChHHH--HHHhhcCccc
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG--VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLS 691 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~--~~~~~~~~~~ 691 (816)
...... ....++..|+|||++... .++.++|||||||++|+|++ |..||...... ...+....
T Consensus 156 ~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~-- 223 (259)
T cd05037 156 ITVLSR----------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH-- 223 (259)
T ss_pred cccccc----------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC--
Confidence 865431 233467789999998776 78999999999999999999 57787544221 11111100
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 692 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 692 ~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
..+......+.+++.+||..+|.+||++. ++++.
T Consensus 224 --------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~il~~ 257 (259)
T cd05037 224 --------RLPMPDCAELANLINQCWTYDPTKRPSFR-AILRD 257 (259)
T ss_pred --------CCCCCCchHHHHHHHHHhccChhhCCCHH-HHHHh
Confidence 01111126899999999999999999998 44443
No 249
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-34 Score=317.55 Aligned_cols=255 Identities=18% Similarity=0.213 Sum_probs=190.5
Q ss_pred cceeeee--cceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccC
Q 003481 475 SFKVGQG--GFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 546 (816)
Q Consensus 475 ~~~LG~G--~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~ 546 (816)
..+||+| +||+||++... |..||+|.+..... .....+.+|+.+++.++||||++++++|. +..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4679999 78999999875 88999999876532 22345778999999999999999999984 45889999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+|+|.+++..... ..+++..++.|+.|++.||.|||+.+ |+||||||+|||++.++.++++|||.+..........
T Consensus 83 ~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 83 YGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999865432 35899999999999999999999987 9999999999999999999999998765432211100
Q ss_pred -CCccccCCCCCCCCCCCcccccc--CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCC----
Q 003481 627 -PSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPL---- 697 (816)
Q Consensus 627 -~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~---- 697 (816)
..........++..|+|||++.+ ..++.++|||||||++|+|++|+.||....... .....+.+...++..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA 238 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence 00001123457788999999875 468999999999999999999999996432211 111111111111100
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 698 ---------------------------------AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 698 ---------------------------------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
...+....+..+.+|+.+||+.||.+|||+.+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 001122356689999999999999999999965543
No 250
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-37 Score=306.83 Aligned_cols=247 Identities=23% Similarity=0.332 Sum_probs=208.3
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceeeccCC
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPN 547 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~~~~ 547 (816)
|.+..+||+|+||.||++.+. |..||||.+... .+..++..|+.+++++..|++|++||.+ ..++++|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 566778999999999999875 899999988543 3566889999999999999999999976 3469999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+..+++.-+. .+|++.++..++...+.||+|||... -||||||..||||+.+|.+||+|||.|..+.+..
T Consensus 113 GSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---- 183 (502)
T KOG0574|consen 113 GSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---- 183 (502)
T ss_pred CcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhH----
Confidence 99999997665 57999999999999999999999987 8999999999999999999999999998876543
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 707 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 707 (816)
.....+.|||.|||||++..-.|+.++||||||++..||.-|++||......+..+. +... .|..-.-|...+.
T Consensus 184 --AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM---IPT~-PPPTF~KPE~WS~ 257 (502)
T KOG0574|consen 184 --AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM---IPTK-PPPTFKKPEEWSS 257 (502)
T ss_pred --HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe---ccCC-CCCCCCChHhhhh
Confidence 245678899999999999999999999999999999999999999976655322110 0000 0111123667888
Q ss_pred HHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 708 RLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 708 ~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+.+++.+||-..|++|-|+.+.+.+.+
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~L~~H~F 285 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALRLCEHTF 285 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence 9999999999999999999987666654
No 251
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.4e-35 Score=321.54 Aligned_cols=245 Identities=26% Similarity=0.303 Sum_probs=189.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|.+.+.||+|+||.||+++.. ++.||+|++..... .....+.+|..++..++|+||+++++++.+ ..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999885 78899999865321 223457889999999999999999999843 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999997643 35889999999999999999999988 999999999999999999999999999876543
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-----CCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILD 695 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d 695 (816)
... ......||+.|+|||++.+ +.++.++|||||||+||+|++|+.||...... ...+...... +
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~--~- 227 (331)
T cd05624 156 GTV-----QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER--F- 227 (331)
T ss_pred Cce-----eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCc--c-
Confidence 211 1234569999999998865 56889999999999999999999999644322 1111111100 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCC--CCCCh
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYGRE--RPDIT 728 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~--RPs~~ 728 (816)
.........+..+.+|+.+|+..++.+ |+++.
T Consensus 228 -~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~ 261 (331)
T cd05624 228 -QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIE 261 (331)
T ss_pred -cCCCccccCCHHHHHHHHHHccCchhhcCCCCHH
Confidence 001111234568899999999865543 34554
No 252
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.2e-35 Score=331.45 Aligned_cols=249 Identities=20% Similarity=0.277 Sum_probs=191.5
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
..+|.+...||+|+||.||++.+. +..||||... ...+.+|+.+|++|+|||||++++++. +..+|||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457899999999999999999986 6889999642 224678999999999999999999874 457899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+. ++|.+++.... ..++|..++.|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.......
T Consensus 242 ~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 YR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 94 68888876543 36999999999999999999999988 99999999999999999999999999987643221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCC----------hHHHHHHhhcCcccc-c
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL----------AGEVRRAVSCGKLSS-I 693 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~----------~~~~~~~~~~~~~~~-~ 693 (816)
. .......||+.|+|||++.+..++.++|||||||+||||++|..|+.. ...+...+....+.. .
T Consensus 316 ~----~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 316 T----PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred c----ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 1 112345799999999999999999999999999999999998865421 112222222221110 0
Q ss_pred cC--------------------C--CCCCCCH--HHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 694 LD--------------------P--LAGDWPT--FVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 694 ~d--------------------~--~~~~~~~--~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+. + ....|.. .....+.+||.+||+.||.+||++.++|.+
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 0 0001111 233478899999999999999999965543
No 253
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=313.68 Aligned_cols=245 Identities=25% Similarity=0.338 Sum_probs=205.6
Q ss_pred cCCCccceeeeecceEEEEEEE--cCeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccc--cCCcccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~--~g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~ 542 (816)
+.|+.-+.||+||||.||-++. +|+-+|.|.+.+.... +..-..+|-.+|.+++.+.||.|-.+| .+.+|||+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 4577888999999999998865 4899999998765443 334567999999999999999998887 46799999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
..|+||+|.-+|.+.++ +.++++.+.-++.+|+.||.+||... ||.|||||+|||||++|+++|+|+|+|..++.+
T Consensus 265 tlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999999988876 56999999999999999999999988 999999999999999999999999999998876
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~ 702 (816)
.. ....+||.+|||||++.++.|+...|+|||||+||||+.|+.||....+- +....+...+-.....++
T Consensus 341 ~~-------~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK---vk~eEvdrr~~~~~~ey~ 410 (591)
T KOG0986|consen 341 KP-------IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK---VKREEVDRRTLEDPEEYS 410 (591)
T ss_pred Cc-------cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh---hhHHHHHHHHhcchhhcc
Confidence 52 34558999999999999999999999999999999999999999643321 111111111112234567
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
...+++...|....|..||.+|-..+
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhccCC
Confidence 78888999999999999999998766
No 254
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.5e-34 Score=305.64 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=200.6
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc----CCcccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~----~~~~lV~ 542 (816)
+|...+.||.|+||.||++... +..||+|.+..... .....+.+|+.++++++||||+++++++. ...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778889999999999999875 78899999875433 23456889999999999999999998763 2368999
Q ss_pred eccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 543 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSK--PEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
||+++++|.+++.... ...++++..++.++.||+.||.|||..+ ..+|+|+||+|+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999999999987542 2357899999999999999999999321 134999999999999999999999999999877
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCC
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPL 697 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~ 697 (816)
..... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ....+..+.
T Consensus 161 ~~~~~------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------- 226 (265)
T cd08217 161 GHDSS------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK-------- 226 (265)
T ss_pred cCCcc------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC--------
Confidence 54331 12345689999999999988899999999999999999999999975432 222222222
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 698 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 698 ~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
....+...+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 227 ~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 123445566789999999999999999999965543
No 255
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.5e-34 Score=304.95 Aligned_cols=243 Identities=29% Similarity=0.404 Sum_probs=198.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-----ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccce
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-----QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-----~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV 541 (816)
+|...+.||+|+||.||+|... +..|++|.+..... .....+.+|+.+++.++||||+++++++.+ ..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677788999999999999885 88999999865432 234568899999999999999999999854 58899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999998654 35889999999999999999999988 99999999999999999999999999887643
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCC-CCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGV-LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~ 700 (816)
.. ......|++.|++||.+.... ++.++|+|||||++|+|++|+.||............+.... ...
T Consensus 155 ~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~~~ 222 (258)
T cd06632 155 FS-------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-----LPP 222 (258)
T ss_pred cc-------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-----CCC
Confidence 32 123456889999999887766 89999999999999999999999975543322222221111 112
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.+...+..+.+++.+||+.+|.+||++.+.+
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 253 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELL 253 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence 3344567889999999999999999998554
No 256
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-36 Score=324.84 Aligned_cols=250 Identities=22% Similarity=0.327 Sum_probs=206.7
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceeeccC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLP 546 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~~~ 546 (816)
.|.++..||.|+||.||++... +-..|.|++........+.|.-|++||..+.||+||+|++.| .+.++++.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 3555667999999999999876 445678888777777778899999999999999999999864 667999999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
||-...++..-+ .+|+..++.-+++|++.||.|||+.+ |||||||..|||++-+|.++|+|||.+......
T Consensus 113 GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t---- 183 (1187)
T KOG0579|consen 113 GGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKST---- 183 (1187)
T ss_pred CchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhH----
Confidence 999999887765 47999999999999999999999988 999999999999999999999999987654322
Q ss_pred CCccccCCCCCCCCCCCcccc-----ccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCC
Q 003481 627 PSFHRSTAPKGSFPYADPEYH-----RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~-----~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
........|||+|||||+. ...+|+.++||||||++|.||..+.+|-...+..+-.+...+- +|...-.
T Consensus 184 --~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS----ePPTLlq 257 (1187)
T KOG0579|consen 184 --RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----EPPTLLQ 257 (1187)
T ss_pred --HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc----CCCcccC
Confidence 2345677899999999975 4568999999999999999999999998766655444332211 1111123
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
|...+..+.+++.+||..||..||++.+.+.+.+
T Consensus 258 PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf 291 (1187)
T KOG0579|consen 258 PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF 291 (1187)
T ss_pred cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence 5567789999999999999999999997776544
No 257
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.6e-35 Score=311.10 Aligned_cols=246 Identities=32% Similarity=0.480 Sum_probs=195.1
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHH--HHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQL--EFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~--~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
|+..+.||+|+||+||+++.. +..||+|++......... ...+|+.++.+++||||+++++++. ...++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567789999999999999997 678999999877654333 3456999999999999999999984 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++... ..+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~-- 152 (260)
T PF00069_consen 81 PGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSENN-- 152 (260)
T ss_dssp TTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTSTT--
T ss_pred cccccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc--
Confidence 999999999733 35899999999999999999999987 9999999999999999999999999998642111
Q ss_pred CCCccccCCCCCCCCCCCccccc-cCCCCcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCccccccCCCCCCCC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~~~~ 702 (816)
.......++..|+|||++. +..++.++||||||+++|+|++|..||.... .....+............. ..
T Consensus 153 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 226 (260)
T PF00069_consen 153 ----ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ--QS 226 (260)
T ss_dssp ----SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT--SH
T ss_pred ----cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc--cc
Confidence 1235567899999999998 7889999999999999999999999997651 1111111111101000000 00
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
......+.+++.+||+.||.+||++.+.+
T Consensus 227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l~ 255 (260)
T PF00069_consen 227 REKSEELRDLIKKMLSKDPEQRPSAEELL 255 (260)
T ss_dssp TTSHHHHHHHHHHHSSSSGGGSTTHHHHH
T ss_pred chhHHHHHHHHHHHccCChhHCcCHHHHh
Confidence 01137899999999999999999998544
No 258
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-35 Score=320.22 Aligned_cols=251 Identities=25% Similarity=0.320 Sum_probs=198.7
Q ss_pred cCCCccceeeeecceEEEEEEEc-CeEEEEEEeccC--CcccHHHHHHHHHHHhcC-CCCceeeEeccc--cCCccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSH--NMQGQLEFQQEVRVLSKL-QHPHLVTLLGAC--PEAWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~--~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~--~~~~~lV~E 543 (816)
..|++.++||+||.+.||++... .+.||+|++... +.+....|.+|+..|.+| .|.+||+||+|- ++.+|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 45888999999999999999886 466888876544 334556799999999999 599999999986 455899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|- ..+|..+|.+.... ...| .+..+..|++.|+.++|.++ |||.||||.|+|+-. |.+||+|||+|..+..+.
T Consensus 441 ~G-d~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred cc-cccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 87 56999999876542 3335 67888999999999999998 999999999999954 689999999999998776
Q ss_pred CcCCCccccCCCCCCCCCCCccccccC-----------CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCcccc
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTG-----------VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSS 692 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~ 692 (816)
... .....+||+.||+||.+... +.++++||||||||||+|+.|++||+.....+. ++..
T Consensus 514 TsI----~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a-----Kl~a 584 (677)
T KOG0596|consen 514 TSI----VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA-----KLHA 584 (677)
T ss_pred cce----eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH-----HHHh
Confidence 433 34567899999999987532 256799999999999999999999975554332 3455
Q ss_pred ccCCCC-CCCCHHHH-HHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 693 ILDPLA-GDWPTFVA-RRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 693 ~~d~~~-~~~~~~~~-~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+.+|.. ..||..-. ..+.++++.||..||.+||++.+.|.+.+-
T Consensus 585 I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl 630 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFL 630 (677)
T ss_pred hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccc
Confidence 566632 22332111 129999999999999999999976655544
No 259
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-34 Score=308.68 Aligned_cols=251 Identities=26% Similarity=0.343 Sum_probs=198.0
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC----Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~lV~ 542 (816)
++|...+.||.|++|.||++.+. +..||+|.+..... .....+.+|++++++++||||++++++|.+ ..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46888899999999999999984 78999999875433 345578999999999999999999998732 478999
Q ss_pred eccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 543 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
||+++++|.+++.... ....+++..+..|+.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 9999999998875422 2346888999999999999999999987 99999999999999999999999999876543
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH-------HHHHHhhcCcccccc
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG-------EVRRAVSCGKLSSIL 694 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~-------~~~~~~~~~~~~~~~ 694 (816)
.. .....++..|+|||.+.+..++.++|||||||++|+|++|..||.... .....+.......+.
T Consensus 158 ~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd06621 158 SL--------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELK 229 (287)
T ss_pred cc--------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhc
Confidence 22 123457889999999998899999999999999999999999997441 111111111111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+... .....+..+.+++.+||..+|.+||++.+.+.+
T Consensus 230 ~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 230 DEPG--NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred cCCC--CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1101 011245789999999999999999999865543
No 260
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.6e-34 Score=302.31 Aligned_cols=243 Identities=28% Similarity=0.463 Sum_probs=194.4
Q ss_pred ceeeeecceEEEEEEEc-CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCchh
Q 003481 476 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQ 551 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL~ 551 (816)
++||.|+||.||++.+. ++.||+|.+...... ....|.+|+.++++++||||+++++++.+ ..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36999999999999886 899999998765443 45678999999999999999999998844 478999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccc
Q 003481 552 DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 631 (816)
Q Consensus 552 ~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 631 (816)
+++.... ..+++..++.++.+++.||.|||+++ ++||||||+|||++.++.+||+|||++.......... .
T Consensus 81 ~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~----~ 151 (251)
T cd05041 81 TFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV----S 151 (251)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCccee----c
Confidence 9986543 35889999999999999999999988 9999999999999999999999999998654322110 1
Q ss_pred cCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003481 632 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 708 (816)
Q Consensus 632 ~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 708 (816)
.....++..|+|||++.++.++.++|||||||++|+|+| |..||..... ....+..+. ....+...+..
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 223 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY--------RMPAPQLCPEE 223 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC--------CCCCCccCCHH
Confidence 122234667999999988899999999999999999999 8889864432 222222111 01123345668
Q ss_pred HHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 709 LVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 709 l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+.+++.+||..+|.+||++. +|+..|+
T Consensus 224 ~~~li~~~l~~~p~~Rp~~~-ell~~l~ 250 (251)
T cd05041 224 IYRLMLQCWAYDPENRPSFS-EIYNELQ 250 (251)
T ss_pred HHHHHHHHhccChhhCcCHH-HHHHHhh
Confidence 99999999999999999998 5555553
No 261
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.5e-34 Score=304.70 Aligned_cols=244 Identities=26% Similarity=0.372 Sum_probs=198.1
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
+|...+.||+|+||.||++... +..+|+|.+..... .....+.+|+.++++++||||+++++.+. +..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5788899999999999998874 78899999876532 23457889999999999999999999874 348899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-CCeeEeecccceeccCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICRLVTEDT 623 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkL~DFGla~~~~~~~ 623 (816)
+++++|.+++.... ...+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.+ +.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999997643 245899999999999999999999987 9999999999999865 458999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH--HhhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~--~~~~~~~~~~~d~~~~~~ 701 (816)
......|+..|+|||.+....++.++||||||+++|+|++|+.||...+.... .+..+. ....
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 221 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT--------FAPI 221 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC--------CCCC
Confidence 12335688999999999888899999999999999999999999965432211 111111 1122
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+...+..+.+++.+||..+|.+||++.+.+.+
T Consensus 222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 222 SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 33456789999999999999999999976644
No 262
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.4e-35 Score=324.33 Aligned_cols=189 Identities=21% Similarity=0.305 Sum_probs=160.4
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
...+|.+.+.||+|+||.||+|... +..||+|+.... ....|+.++.+++||||++++++|.. ..++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3457999999999999999999986 578999975432 23569999999999999999999843 4789999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+. ++|.+++.... ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 138 ~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 138 HYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred ccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 995 68888876543 46899999999999999999999988 9999999999999999999999999987543221
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 675 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf 675 (816)
......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 -------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred -------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 123456999999999999999999999999999999999865543
No 263
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.8e-34 Score=303.10 Aligned_cols=243 Identities=21% Similarity=0.283 Sum_probs=199.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|+..+.||.|+||.||.++.. +..|++|.+.... ......+.+|+.++++++|+||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5888899999999999888764 7889999986543 3344578899999999999999999999854 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999987653 246899999999999999999999987 99999999999999999999999999987654331
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~ 702 (816)
......|++.|+|||++.+..++.++||||||+++|+|++|..||...... ...+..+... ..+
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~ 222 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYT--------PVV 222 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--------CCc
Confidence 123456899999999998888999999999999999999999999653321 1122222221 112
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...+..+.+++.+||..+|.+||++.+.+
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll 251 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVL 251 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 34566899999999999999999998544
No 264
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.3e-34 Score=312.80 Aligned_cols=251 Identities=25% Similarity=0.283 Sum_probs=198.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||+|+||.||++... +..||+|.+...... ....+..|+.++..++||||+++++.+.+ ..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999885 789999999765433 34468899999999999999999998844 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+.+++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999886543 246899999999999999999999988 999999999999999999999999998765432
Q ss_pred CCcCC-----------------------CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH
Q 003481 623 TLYLP-----------------------SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 679 (816)
Q Consensus 623 ~~~~~-----------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~ 679 (816)
..... .........||..|+|||++.+..++.++||||||+++|+|++|+.||...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 21100 0011123468999999999998889999999999999999999999997554
Q ss_pred HHHHHhhcCccccccCCCCCCCC--HHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 680 EVRRAVSCGKLSSILDPLAGDWP--TFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 680 ~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
........ .... ..++ ...+..+.+++.+||..+|.+||+....+
T Consensus 237 ~~~~~~~~------~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~ 283 (316)
T cd05574 237 RDETFSNI------LKKE-VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGA 283 (316)
T ss_pred hHHHHHHH------hcCC-ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhH
Confidence 32222110 1100 0111 11567899999999999999999955333
No 265
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.9e-35 Score=306.48 Aligned_cols=245 Identities=24% Similarity=0.324 Sum_probs=199.2
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|+..+.||+|+||.||++... |..||+|.+.... ......+.+|+.++++++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999875 7899999986543 2334578899999999999999999999854 58899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++..... ..+++..++.|+.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999998865432 35789999999999999999999987 99999999999999999999999999987644221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~ 702 (816)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||...... ...+..+.. ...+
T Consensus 157 ------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~ 222 (256)
T cd08218 157 ------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY--------PPVS 222 (256)
T ss_pred ------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC--------CCCc
Confidence 122345889999999999888999999999999999999999999643321 111222221 1223
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
...+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 3456789999999999999999999966543
No 266
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.6e-34 Score=307.52 Aligned_cols=250 Identities=27% Similarity=0.354 Sum_probs=199.4
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC-------
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE------- 536 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~------- 536 (816)
..+++|...+.||.|+||.||+|... +..|++|++..... ....|.+|+.++.++ .||||++++++|..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 45789999999999999999999985 67899999875543 345789999999999 79999999999832
Q ss_pred -CccceeeccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 2689999999999999886532 2356899999999999999999999988 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCcccccc-----CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhc
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSC 687 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~ 687 (816)
++....... .......|++.|+|||++.. ..++.++|||||||+||+|++|+.||......... +..
T Consensus 159 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 232 (275)
T cd06608 159 VSAQLDSTL------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR 232 (275)
T ss_pred cceecccch------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc
Confidence 987654322 12244568999999998753 34678999999999999999999999643322211 111
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 688 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
+... ....+...+..+.+|+.+||..||.+|||+.+.+.
T Consensus 233 ~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 NPPP------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cCCC------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1111 11123345678999999999999999999986543
No 267
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.9e-34 Score=304.35 Aligned_cols=255 Identities=24% Similarity=0.269 Sum_probs=201.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
++|.+.+.||.|+||.||+|... +..|++|++..... .....+.+|+.+++.++|+||+++++.+. +..++|||+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47888999999999999999874 78899999875432 34567899999999999999999999874 458899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++........+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976543346899999999999999999999987 99999999999999999999999999987654332
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCC--C
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD--W 701 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~--~ 701 (816)
.. ........|+..|+|||++... .++.++|||||||++|+|++|+.||............. .. ..+.... .
T Consensus 158 ~~--~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~-~~~~~~~~~~ 232 (267)
T cd06610 158 RT--RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL--QN-DPPSLETGAD 232 (267)
T ss_pred cc--ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh--cC-CCCCcCCccc
Confidence 11 0122344689999999998777 78999999999999999999999997544321111100 00 0111111 1
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
....+..+.+++.+||..||.+||++.+.+.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 233 YKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1245678999999999999999999986553
No 268
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.4e-34 Score=308.59 Aligned_cols=250 Identities=24% Similarity=0.325 Sum_probs=194.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
++|.....||+|+||.||+|.+. +..||+|++..... .....+.+|+.++.+++||||+++++++.. ..++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999885 78999999865432 233567899999999999999999999844 4789999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++++|..++... ..+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 99998888776443 35899999999999999999999987 9999999999999999999999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh--c--Ccc--------
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--C--GKL-------- 690 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--~--~~~-------- 690 (816)
. ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||........... . +.+
T Consensus 155 ~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 155 D------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred c------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 1 1223457889999998865 5688999999999999999999999964433211110 0 000
Q ss_pred ------ccccCCCCCC------CCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 691 ------SSILDPLAGD------WPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 691 ------~~~~d~~~~~------~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.....+.... .....+..+.+|+.+||+.+|++||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 281 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL 281 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence 0000010000 0112456789999999999999999998654
No 269
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.6e-34 Score=305.75 Aligned_cols=247 Identities=27% Similarity=0.403 Sum_probs=203.0
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
++|...+.||.|++|.||++... +..|++|++..... .....+.+|+.++.+++||||+++++++.. ..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46888899999999999999886 88999999876654 345679999999999999999999999844 58899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
+++++|.+++... ..+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999999765 468999999999999999999999 88 9999999999999999999999999998775433
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
. ......++..|+|||.+.+..++.++||||||+++|+|+||..||.... ........ +........
T Consensus 155 ~------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-----~~~~~~~~~ 223 (264)
T cd06623 155 D------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA-----ICDGPPPSL 223 (264)
T ss_pred C------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH-----HhcCCCCCC
Confidence 2 1134568899999999999999999999999999999999999996553 11111111 011111222
Q ss_pred CHH-HHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 702 PTF-VARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 702 ~~~-~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+.. .+..+.+++.+||..+|.+||++.+.+.+
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 333 56789999999999999999999966544
No 270
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.9e-34 Score=310.16 Aligned_cols=250 Identities=26% Similarity=0.368 Sum_probs=202.8
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
++|...+.||.|+||.||+|... +..|++|.+..........+.+|+.++..++||||++++++|. +..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888899999999999999864 7889999987655555667899999999999999999999884 4589999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++... .+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~- 170 (293)
T cd06647 99 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (293)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc-
Confidence 999999988643 4788999999999999999999988 99999999999999999999999999876654321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......|++.|++||.+....++.++|||||||++|+|++|+.||............+... ......+...
T Consensus 171 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~ 241 (293)
T cd06647 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG----TPELQNPEKL 241 (293)
T ss_pred -----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC----CCCCCCcccc
Confidence 1234468899999999988889999999999999999999999997544322211111000 0001123345
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+..+.+++.+||..+|.+||++.+.+.+.+-
T Consensus 242 ~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~ 272 (293)
T cd06647 242 SAIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272 (293)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence 6689999999999999999999977766544
No 271
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-34 Score=306.44 Aligned_cols=248 Identities=24% Similarity=0.404 Sum_probs=197.8
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc------cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ------GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 540 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~------~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~l 540 (816)
+|+....||+|+||.||+|... +..||+|++...... ....+.+|+.++++++||||+++++++.+ ..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 5778889999999999999874 889999998654321 23568899999999999999999999854 5789
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC-CeeEeecccceec
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLV 619 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-~vkL~DFGla~~~ 619 (816)
||||+++++|.+++.... ++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++ .+||+|||++...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999986543 5889999999999999999999988 99999999999998776 5999999999876
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH---HHHHhhcCccccccCC
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSCGKLSSILDP 696 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~---~~~~~~~~~~~~~~d~ 696 (816)
........ .......|+..|+|||++.+..++.++||||||+++|+|++|..||..... ......... ..
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~ 227 (268)
T cd06630 155 AAKGTGAG--EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS-----AT 227 (268)
T ss_pred ccccccCC--ccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc-----cC
Confidence 54321110 112334688999999999888899999999999999999999999963221 111100000 01
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 697 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 697 ~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.....+...+..+.+++.+||..+|.+||++.+.+
T Consensus 228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 12345556778999999999999999999998554
No 272
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.4e-35 Score=311.88 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=194.5
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
++|...+.||+|+||.||+|.+. ++.||+|++...... ....+.+|+.++..++||||++++++|.. ..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999985 789999998654332 34568899999999999999999999854 4899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++++|..+.... ..++|..++.++.||+.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 99999998876543 24899999999999999999999987 9999999999999999999999999998764432
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh----cCccc-------
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----CGKLS------- 691 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~----~~~~~------- 691 (816)
. ......++..|+|||++.+ ..++.++||||||+++|+|++|++||........... .+.+.
T Consensus 155 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 155 E------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred c------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHh
Confidence 1 1233468899999998865 4578899999999999999999999964332211100 00000
Q ss_pred -------cccCCCCC------CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 692 -------SILDPLAG------DWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 692 -------~~~d~~~~------~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
....+... ......+..+.+|+.+||+.+|.+||++.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000 011234678999999999999999999986543
No 273
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.4e-34 Score=305.39 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=195.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---c-------cHHHHHHHHHHHhcCCCCceeeEecccc--C
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---Q-------GQLEFQQEVRVLSKLQHPHLVTLLGACP--E 536 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~-------~~~~~~~E~~il~~l~HpnIv~l~g~~~--~ 536 (816)
+|...+.||.|+||.||+|... |..||+|.+..... . ..+.+..|+.++.+++||||+++++++. +
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999764 78999998754211 0 1235788999999999999999999984 4
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence 588999999999999998765 35889999999999999999999987 999999999999999999999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCC--CCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc--Ccccc
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV--LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC--GKLSS 692 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~--~~~~~ 692 (816)
........ ........|+..|+|||.+.... ++.++||||||+++|+|++|..||............ .....
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 231 (272)
T cd06629 156 KKSDDIYD----NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP 231 (272)
T ss_pred cccccccc----ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC
Confidence 76543211 01223456889999999887654 889999999999999999999999654433222211 11111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 693 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 693 ~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.+ .......++..+.+++.+||..+|.+||++.+.+.
T Consensus 232 ~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 232 PI---PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cC---CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11 11122235678999999999999999999986543
No 274
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.1e-34 Score=309.01 Aligned_cols=250 Identities=25% Similarity=0.313 Sum_probs=192.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|+..+.||.|+||.||+|++. +..||||.+..... .....+.+|+.++++++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 5888899999999999999885 78999999865432 223468899999999999999999999843 58899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+. ++|..++..... ..+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 688888865432 46899999999999999999999987 99999999999999999999999999876543221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCC-CCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hhc-Ccc---------
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGV-LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-GKL--------- 690 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~~-~~~--------- 690 (816)
......+++.|+|||++.+.. ++.++|||||||++|+|+||+.||......... ... +..
T Consensus 156 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 156 ------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred ------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 123345788999999886644 688999999999999999999999644332111 110 000
Q ss_pred ---------ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 691 ---------SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 691 ---------~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...............+..+.+++.+||+.||.+||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 00000000011122456788999999999999999998654
No 275
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4e-34 Score=304.86 Aligned_cols=251 Identities=24% Similarity=0.407 Sum_probs=196.7
Q ss_pred CCccceeeeecceEEEEEEEc-----CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003481 472 FSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 536 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------- 536 (816)
|.+.+.||+|+||.||+|.+. +..||||++.... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556778999999999999863 5789999986543 2335568899999999999999999998732
Q ss_pred CccceeeccCCCchhhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeec
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKS---NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 613 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DF 613 (816)
..+++++|+.+|+|.+++.... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 1368899999999998875322 2235789999999999999999999987 999999999999999999999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCcc
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKL 690 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~ 690 (816)
|+++........ .......+++.|++||.+....++.++|||||||++|+|++ |++||..... ....+..+..
T Consensus 158 g~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 233 (273)
T cd05074 158 GLSKKIYSGDYY----RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR 233 (273)
T ss_pred cccccccCCcce----ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc
Confidence 999876433211 11223445678999999988889999999999999999999 8899864432 2222222211
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 691 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 691 ~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
. ..+...+..+.+++.+||+.+|.+||++. ++...|+.+
T Consensus 234 ~--------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~-~~~~~l~~~ 272 (273)
T cd05074 234 L--------KQPPDCLEDVYELMCQCWSPEPKCRPSFQ-HLRDQLELI 272 (273)
T ss_pred C--------CCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHhh
Confidence 1 11223456899999999999999999999 677777654
No 276
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6e-34 Score=304.77 Aligned_cols=242 Identities=27% Similarity=0.384 Sum_probs=197.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
-|...+.||.|+||.||+|.+. +..||||.+..... .....|.+|+.++.+++||||+++++++. +..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3667788999999999999874 78999999865432 23456889999999999999999999984 3488999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++++|.+++.. ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06641 85 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence 99999998853 35889999999999999999999987 99999999999999999999999999887654321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCCCCCH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~~~~~ 703 (816)
......++..|+|||++.+..++.++|||||||++|+|++|..||....... ..+..+. ....+.
T Consensus 157 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 223 (277)
T cd06641 157 -----KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN--------PPTLEG 223 (277)
T ss_pred -----hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC--------CCCCCc
Confidence 1233468899999999988889999999999999999999999996443221 1111111 112233
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
.++..+.+++.+||+.+|.+||++.+.+.+
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 456788999999999999999999976654
No 277
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.1e-34 Score=305.30 Aligned_cols=250 Identities=28% Similarity=0.439 Sum_probs=198.5
Q ss_pred cCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWS 539 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~ 539 (816)
.+|.....||.|+||.||+|+.. ...|++|.+...... ....|.+|+.++.+++||||++++++|.+ ..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46888899999999999999863 457999988654433 34578999999999999999999999854 588
Q ss_pred ceeeccCCCchhhhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNV------SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 613 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DF 613 (816)
+||||+++|+|.+++...... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998755421 25899999999999999999999988 999999999999999999999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCcc
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKL 690 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~ 690 (816)
|++........ .......++..|+|||.+.+..++.++||||||+++|+|++ |..||..... .......+.+
T Consensus 162 ~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~ 236 (275)
T cd05046 162 SLSKDVYNSEY-----YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL 236 (275)
T ss_pred ccccccCcccc-----cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc
Confidence 99875432221 12233456778999999988889999999999999999999 8889864322 2222222222
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 691 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 691 ~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
... .+...+..+.+++.+||+.+|.+||++. +++..|
T Consensus 237 ~~~-------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~-~~l~~l 273 (275)
T cd05046 237 ELP-------VPEGCPSRLYKLMTRCWAVNPKDRPSFS-ELVSAL 273 (275)
T ss_pred CCC-------CCCCCCHHHHHHHHHHcCCCcccCCCHH-HHHHHh
Confidence 111 1223456899999999999999999999 455444
No 278
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.6e-34 Score=309.00 Aligned_cols=254 Identities=21% Similarity=0.236 Sum_probs=196.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||+|+||.||++... +..|++|.+..... .....+.+|+.++..++||||+++++.+.. ..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47888999999999999999886 68899999876542 223467899999999999999999998854 368999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999996543 5899999999999999999999987 999999999999999999999999998742211
Q ss_pred CCc---------CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCccc
Q 003481 623 TLY---------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLS 691 (816)
Q Consensus 623 ~~~---------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~ 691 (816)
... ...........|+..|+|||++....++.++|||||||++|+|++|..||.... ........+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE 234 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence 100 000011123467889999999988889999999999999999999999996432 222222222111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 692 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 692 ~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
.+.. +...+..+.+++.+||+.+|.+||+.. .+.+.|+
T Consensus 235 ---~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~-~~~~ll~ 272 (305)
T cd05609 235 ---WPEG---DEALPADAQDLISRLLRQNPLERLGTG-GAFEVKQ 272 (305)
T ss_pred ---CCCc---cccCCHHHHHHHHHHhccChhhccCcc-CHHHHHh
Confidence 1111 113456789999999999999999975 3444444
No 279
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-35 Score=305.39 Aligned_cols=257 Identities=26% Similarity=0.396 Sum_probs=203.5
Q ss_pred HHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-cc------HHHHHHHHHHHhcCCCCceeeEeccc--
Q 003481 466 QTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QG------QLEFQQEVRVLSKLQHPHLVTLLGAC-- 534 (816)
Q Consensus 466 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~------~~~~~~E~~il~~l~HpnIv~l~g~~-- 534 (816)
....++|-..++||+|||+.||++.+. .+.||+|+-..... .+ .+...+|.+|-..|.||.||++|++|
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 345567888899999999999999875 78899998644322 11 12356899999999999999999998
Q ss_pred -cCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC---CCCeeE
Q 003481 535 -PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKI 610 (816)
Q Consensus 535 -~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vkL 610 (816)
.+.+|-|+|||+|.+|.-+|..+. .+++.++..|+.||+.||.||.... .||||-||||.||||.. -|.+||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEe
Confidence 356899999999999999997764 5889999999999999999999988 68999999999999953 478999
Q ss_pred eecccceeccCCCCc-CCCccccCCCCCCCCCCCccccccC----CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHh
Q 003481 611 CDFGICRLVTEDTLY-LPSFHRSTAPKGSFPYADPEYHRTG----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV 685 (816)
Q Consensus 611 ~DFGla~~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~ 685 (816)
+|||+++.+..+... ......+....||.+|++||.|.-+ ..+.|+||||+|||+|.++.|+.||+....-...+
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdIL 694 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDIL 694 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHH
Confidence 999999998765543 2233345667899999999977533 57889999999999999999999998554433333
Q ss_pred hcCccccccCCCCCCCC--HHHHHHHHHHHHHhhccCCCCCCCChH
Q 003481 686 SCGKLSSILDPLAGDWP--TFVARRLVDLGLQCCELYGRERPDITP 729 (816)
Q Consensus 686 ~~~~~~~~~d~~~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs~~e 729 (816)
....+. ....-.|| +.++.....+|.+||++.-++|.+..+
T Consensus 695 qeNTIl---kAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~q 737 (775)
T KOG1151|consen 695 QENTIL---KATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQ 737 (775)
T ss_pred hhhchh---cceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHH
Confidence 333222 11111222 346778899999999999999987763
No 280
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.9e-34 Score=300.09 Aligned_cols=241 Identities=34% Similarity=0.543 Sum_probs=196.4
Q ss_pred CCccceeeeecceEEEEEEEcC------eEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 472 FSESFKVGQGGFGCVYKGEMLG------RTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~g------~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
|.+.+.||.|+||.||++.+.. ..||+|++...... ....+..|+.++..++||||+++++++.+ ..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456789999999999998863 78999999766544 45678999999999999999999999854 588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence 99999999999876442 12899999999999999999999987 999999999999999999999999999877654
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChH--HHHHHhhcCccccccCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~--~~~~~~~~~~~~~~~d~~~~ 699 (816)
... ......+++.|+|||.+.+..++.++||||||+++|+|++ |.+||.... .....+..+...
T Consensus 157 ~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (258)
T smart00219 157 DYY-----KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL-------- 223 (258)
T ss_pred ccc-----ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--------
Confidence 321 1112347889999999988889999999999999999998 888886432 222222222211
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITP 729 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e 729 (816)
..+...+..+.+++.+||..+|.+||++.+
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 253 (258)
T smart00219 224 PKPENCPPEIYKLMLQCWAEDPEDRPTFSE 253 (258)
T ss_pred CCCCcCCHHHHHHHHHHCcCChhhCcCHHH
Confidence 122235678999999999999999999984
No 281
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=4.7e-34 Score=305.12 Aligned_cols=245 Identities=24% Similarity=0.410 Sum_probs=196.3
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC---CCceeeEeccccC--Ccccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ---HPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~---HpnIv~l~g~~~~--~~~lV~ 542 (816)
.|+..+.||.|+||.||+|.+. +..||+|.+..... .....+.+|+.++++++ |||+++++++|.+ ..++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4777889999999999999974 78999999875432 34457889999999996 9999999998844 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999999988542 5899999999999999999999988 999999999999999999999999999877543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
.. ......|+..|+|||++.++ .++.++|||||||++|+|++|..||............. .. ....+
T Consensus 155 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~---~~---~~~~~ 222 (277)
T cd06917 155 SS------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP---KS---KPPRL 222 (277)
T ss_pred cc------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc---cC---CCCCC
Confidence 31 12345689999999988654 56899999999999999999999997544322211111 10 01111
Q ss_pred CH-HHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 702 PT-FVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 702 ~~-~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
+. ..+..+.+++.+||+.||.+||++.+.+.+.
T Consensus 223 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~ 256 (277)
T cd06917 223 EDNGYSKLLREFVAACLDEEPKERLSAEELLKSK 256 (277)
T ss_pred CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhCh
Confidence 11 1456899999999999999999998665443
No 282
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.4e-34 Score=306.21 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=190.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHH-HhcCCCCceeeEecccc--CCccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRV-LSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~i-l~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
++|.+.+.||+|+||.||++.+. |..||||++..... .....+..|+.+ ++.++||||+++++++. ...++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 47888999999999999999885 88999999876532 234456667665 55668999999999984 45899999
Q ss_pred ccCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 544 YLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSS-KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 544 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|++ |+|.+++... .....+++..++.++.||+.||.|||+. + ++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 6888877543 2235689999999999999999999986 5 99999999999999999999999999886643
Q ss_pred CCCcCCCccccCCCCCCCCCCCcccccc----CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRT----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPL 697 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~ 697 (816)
.. ......|+..|+|||++.+ ..++.++|+|||||++|+|++|+.||.........+.. .+...
T Consensus 157 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~ 224 (283)
T cd06617 157 SV-------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ-----VVEEP 224 (283)
T ss_pred cc-------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH-----HHhcC
Confidence 22 1233468899999998754 45789999999999999999999999643211111110 00110
Q ss_pred CCCCC-HHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 698 AGDWP-TFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 698 ~~~~~-~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
....+ ..++..+.+++.+||..+|.+||++.+.+.+
T Consensus 225 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 225 SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111 2345689999999999999999999865543
No 283
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4.5e-34 Score=307.32 Aligned_cols=243 Identities=23% Similarity=0.337 Sum_probs=196.2
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceeeccCC
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPN 547 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~~~~ 547 (816)
|...+.||.|++|.||++... +..|++|++..........+.+|+.++..++||||+++++++ .+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444568999999999999874 788999998765555556788999999999999999999987 3568999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
++|.+++.. ..+++..+..|+.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++........
T Consensus 101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--- 170 (285)
T cd06648 101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--- 170 (285)
T ss_pred CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc---
Confidence 999998865 24889999999999999999999988 99999999999999999999999998876543221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
......|++.|+|||.+.+..++.++|||||||++|+|++|+.||....... ..+..+.. +. ...+...
T Consensus 171 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~ 241 (285)
T cd06648 171 ---RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP-----PK-LKNLHKV 241 (285)
T ss_pred ---ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC-----CC-CcccccC
Confidence 1233568999999999988889999999999999999999999986443221 11111111 11 1112235
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 5689999999999999999999865543
No 284
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.9e-34 Score=307.95 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=196.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|.+.+.||.|+||.||+|.+. |..||+|++..... .....+.+|+.++++++||||+++++++.. ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778889999999999999875 78999999876543 234578899999999999999999998843 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+ +++|.+++.... ..+++..++.++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999886544 46899999999999999999999988 99999999999999999999999999987654321
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hhc-Cc----------
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-GK---------- 689 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~~-~~---------- 689 (816)
.......|+..|+|||++.+. .++.++|||||||++|+|+||.+||......... +.. +.
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 112345689999999988654 4689999999999999999998888643321110 000 00
Q ss_pred ----cccccCCCC-----CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 690 ----LSSILDPLA-----GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 690 ----~~~~~d~~~-----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
...+..+.. .......+..+.+|+.+||+.+|.+||++.+.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 01112345789999999999999999999965543
No 285
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.7e-34 Score=309.47 Aligned_cols=250 Identities=25% Similarity=0.320 Sum_probs=193.7
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc-----cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccce
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-----GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV 541 (816)
+|...+.||.|+||.||+|.+. +..||||.+...... ....+..|+.++.+++|+||+++++++.+ ..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999875 789999999765433 23356789999999999999999999854 57899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+ +|+|.+++.... ..+++..++.|+.||+.||.|||+.+ |+|+||+|+|||++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999986543 36899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hhc-C--------
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-G-------- 688 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~~-~-------- 688 (816)
... ......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||......... ... +
T Consensus 155 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 155 PNR------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228 (298)
T ss_pred CCc------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhh
Confidence 321 1233456888999998854 46789999999999999999998887543322111 000 0
Q ss_pred ---ccccccCC------CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 689 ---KLSSILDP------LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 689 ---~~~~~~d~------~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
........ .........+..+.+++.+||..+|.+||++.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00000000 000111234678999999999999999999996553
No 286
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.2e-34 Score=307.27 Aligned_cols=245 Identities=28% Similarity=0.386 Sum_probs=198.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
++|...+.||.|+||.||++.+. +..||+|.+..... .....+.+|+.++++++||||+++++++. ...++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999986 78999999876543 34457889999999999999999999874 358899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
+++++|.+++.... ..+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 99999999987653 468889999999999999999999 77 9999999999999999999999999987654322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH----HHHHHhhcCccccccCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG----EVRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~----~~~~~~~~~~~~~~~d~~~~ 699 (816)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||.... ....... .+......
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~ 222 (265)
T cd06605 156 --------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ-----YIVNEPPP 222 (265)
T ss_pred --------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH-----HHhcCCCC
Confidence 112568899999999998899999999999999999999999996442 1111111 11111111
Q ss_pred CCCHH-HHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 700 DWPTF-VARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 700 ~~~~~-~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
..+.. .+..+.++|.+||..+|.+||++.+.+.
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 223 RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 22222 6678999999999999999999986553
No 287
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.1e-33 Score=304.79 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=192.1
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++++|...+.||+|+||.||+|... +..||+|++....... ...+.+|+.++..++|+||+++++++.+ ..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999874 8899999986554332 3467789999999999999999998844 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+. ++|.+.+.... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9996 67766665433 35788899999999999999999987 999999999999999999999999998764332
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc-----C--------
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC-----G-------- 688 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~-----~-------- 688 (816)
.. ......+++.|+|||++.+. .++.++|||||||++|+|++|..||.........+.. +
T Consensus 157 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 157 SQ------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred CC------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence 21 12334578999999988654 5789999999999999999999999654432111110 0
Q ss_pred ---ccc----cccCCC-CCCCC-----HHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 689 ---KLS----SILDPL-AGDWP-----TFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 689 ---~~~----~~~d~~-~~~~~-----~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.+. ...... ..... ...+..+.+++.+|+..||.+|||+.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000 000000 00000 012457889999999999999999986553
No 288
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.5e-34 Score=307.90 Aligned_cols=234 Identities=29% Similarity=0.384 Sum_probs=194.8
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++|...+.||.|+||.||++.+. ++.||+|++..... .....+.+|+.++++++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888899999999999999885 78999999865432 234568899999999999999999998844 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++++|.+++.... .+++..+..++.||+.||.|||+.+ |+|+||+|+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999987653 5889999999999999999999987 999999999999999999999999998876543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~ 700 (816)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...+..+. ..
T Consensus 155 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---------~~ 216 (290)
T cd05580 155 ---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGK---------VR 216 (290)
T ss_pred ---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------cc
Confidence 13446899999999998888999999999999999999999999754422 12222221 12
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
++...+..+.+++.+||..||.+||+.
T Consensus 217 ~~~~~~~~l~~li~~~l~~~p~~R~~~ 243 (290)
T cd05580 217 FPSFFSPDAKDLIRNLLQVDLTKRLGN 243 (290)
T ss_pred CCccCCHHHHHHHHHHccCCHHHccCc
Confidence 333446789999999999999999943
No 289
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-34 Score=312.38 Aligned_cols=242 Identities=29% Similarity=0.488 Sum_probs=203.1
Q ss_pred cceeeeecceEEEEEEEc---Ce--EEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC-CccceeeccCC
Q 003481 475 SFKVGQGGFGCVYKGEML---GR--TVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPN 547 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~---g~--~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~E~~~~ 547 (816)
.++||+|.||.|++|.|+ |+ .||||++...... ....|.+|+.+|.+|+|||+|+|||+..+ ...+|+|+++.
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl 194 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL 194 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence 356999999999999997 33 5999999887665 56689999999999999999999999864 57899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+.|.+ .....|.......++.|||.|+.||.+.+ +|||||...||||.....|||+|||+.+.+.......
T Consensus 195 GSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y- 269 (1039)
T KOG0199|consen 195 GSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY- 269 (1039)
T ss_pred chHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcce-
Confidence 999999988 33456788888999999999999999987 9999999999999999999999999999887655321
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
.......-.+.|+|||.++...++.++|||+|||+||||+| |..||.+... +...+..|. ....|..
T Consensus 270 --vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e--------rLpRPk~ 339 (1039)
T KOG0199|consen 270 --VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE--------RLPRPKY 339 (1039)
T ss_pred --EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc--------cCCCCCC
Confidence 12334445678999999999999999999999999999999 8899965443 333333322 2234667
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
+++.+.++++.||..+|.+||++. .|.
T Consensus 340 csedIY~imk~cWah~paDRptFs-air 366 (1039)
T KOG0199|consen 340 CSEDIYQIMKNCWAHNPADRPTFS-AIR 366 (1039)
T ss_pred ChHHHHHHHHHhccCCccccccHH-HHH
Confidence 889999999999999999999999 443
No 290
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.6e-34 Score=301.24 Aligned_cols=250 Identities=28% Similarity=0.373 Sum_probs=197.7
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
+|...+.||+|+||.||+|... +..|++|.+...... ....+.+|+.++++++|+||+++++++. +..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778889999999999999874 789999998766543 4567899999999999999999999874 458899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++.... .+++..+..|+.+++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999999986542 4788999999999999999999988 99999999999999999999999999987754432
Q ss_pred cCCCccccCCCCCCCCCCCccccccCC---CCcchhHhHHHHHHHHHHhCCCCCCChHHHH-HHhhcCccccccCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGV---LTPKSDSYSFGLIILQLLTGRLPVGLAGEVR-RAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~ksDVwSlGviL~elltG~~Pf~~~~~~~-~~~~~~~~~~~~d~~~~~ 700 (816)
... .......+++.|+|||++.... ++.++||||||+++|+|++|+.||....... ....... ...+....
T Consensus 155 ~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~ 229 (264)
T cd06626 155 TMG--EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPIPD 229 (264)
T ss_pred ccc--ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCCCc
Confidence 110 0012356889999999988766 8899999999999999999999996432111 1111111 00111111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
+ ...+..+.+++.+||+.+|.+||++.+.+.
T Consensus 230 ~-~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 230 S-LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred c-cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1 123678899999999999999999996543
No 291
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.3e-34 Score=307.51 Aligned_cols=249 Identities=22% Similarity=0.272 Sum_probs=189.5
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|...+.||.|+||.||+|.+. |..||+|.+...... ....+.+|+.++++++||||+++++++.+ ..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778889999999999999985 889999998654322 23457789999999999999999999844 48899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+. ++|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 96 57877775533 35899999999999999999999988 99999999999999999999999999986543221
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh---c--C--------cc
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS---C--G--------KL 690 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~---~--~--------~~ 690 (816)
......+++.|+|||++.+. .++.++|||||||++|+|+||..||.........+. . + .+
T Consensus 155 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 155 ------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred ------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHh
Confidence 12344678999999988664 478999999999999999999988632221111100 0 0 00
Q ss_pred ccccCCC-CC---------CCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 691 SSILDPL-AG---------DWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 691 ~~~~d~~-~~---------~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
....+.. .. ......+..+.+|+.+||+.||.+|||+.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il 279 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEAL 279 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHh
Confidence 0000000 00 01123456889999999999999999998554
No 292
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=8.4e-34 Score=304.95 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=202.6
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcccee
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~ 542 (816)
..+++|.....||.|+||.||+|.+. +..|++|++..... ....+.+|+.++..++|+||+++++++. +..++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 35567888889999999999999986 88999999976554 5567889999999999999999999874 4588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++++|.+++.... ..+++..++.++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 9999999999997654 36899999999999999999999977 999999999999999999999999998765432
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh--cCccccccCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLSSILDPLAGD 700 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--~~~~~~~~d~~~~~ 700 (816)
.. ......++..|++||++.+..++.++|||||||++|+|++|+.||........... ...... ..
T Consensus 170 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------~~ 237 (286)
T cd06614 170 KS------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPP------LK 237 (286)
T ss_pred hh------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------Cc
Confidence 21 12334578899999999888899999999999999999999999975443322211 111111 11
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.+..++..+.+++.+||+.+|..||++.+.+.
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 12224568999999999999999999996554
No 293
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=9.6e-34 Score=296.54 Aligned_cols=246 Identities=27% Similarity=0.413 Sum_probs=200.8
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 546 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~ 546 (816)
+|...+.||.|++|.||++.+. +..|++|++..........+.+|+.++++++||||+++++++. +..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3677889999999999999986 7889999997766555678999999999999999999999884 45889999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+++|.+++.... ..+++..+..++.+++.||.|||..+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 999999987653 46899999999999999999999977 99999999999999999999999999987654331
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
.....++..|++||++....++.++||||||+++|+|++|+.||...+........... .......+...+
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 224 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN----GPPGLRNPEKWS 224 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc----CCCCcCcccccC
Confidence 23456889999999998888999999999999999999999999755322221111110 000011122235
Q ss_pred HHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 707 RRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
..+.+++.+||+.||.+||++.+.+.
T Consensus 225 ~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 225 DEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 68999999999999999999986543
No 294
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.2e-34 Score=306.97 Aligned_cols=251 Identities=24% Similarity=0.323 Sum_probs=196.4
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
++|+..+.||.|+||.||+|.+. +..||+|++..... .....+.+|+.++++++|+||++++++|. +..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 46888999999999999999885 78899999865432 33467889999999999999999999984 34899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|++++.|..++... ..+++..+..++.+|+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 99987776655432 34889999999999999999999988 9999999999999999999999999988765433
Q ss_pred CcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc----Cc---------
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK--------- 689 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----~~--------- 689 (816)
. .......++..|+|||++.+. .++.++||||||+++|+|++|++||............ +.
T Consensus 155 ~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 155 A-----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred c-----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhc
Confidence 1 112345688999999999888 8899999999999999999999999644332211110 00
Q ss_pred -----cc--cccCCCC-----CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 690 -----LS--SILDPLA-----GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 690 -----~~--~~~d~~~-----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+. ...+... ..++..++..+.+||.+||..+|.+||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 283 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELL 283 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHh
Confidence 00 0000000 012333477899999999999999999998544
No 295
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.6e-34 Score=319.57 Aligned_cols=252 Identities=26% Similarity=0.318 Sum_probs=198.9
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC-C-----CceeeEeccc--cCCccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-H-----PHLVTLLGAC--PEAWSL 540 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~-H-----pnIv~l~g~~--~~~~~l 540 (816)
+|.+.+.||+|.||.|.+|.+. ++.||||+++.... -..+-..|+.+|..|+ | -|+|+++++| .++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7899999999999999999886 78999999976543 2334567999999996 4 3899999997 568999
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC--CCeeEeeccccee
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE--LSSKICDFGICRL 618 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~--~~vkL~DFGla~~ 618 (816)
|+|.+ ..+|.++|.... +..|+...+..|+.||+.||.+||..+ |||+||||+||||..- ..+||+|||.|..
T Consensus 266 VfELL-~~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eehhh-hhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence 99999 569999997654 567999999999999999999999988 9999999999999643 3699999999988
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--------------
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA-------------- 684 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~-------------- 684 (816)
..... ....-+..|.|||++.+.+|+.+.||||||||+.||++|.+.|.+.++..+.
T Consensus 341 ~~q~v---------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 341 ESQRV---------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKM 411 (586)
T ss_pred cCCcc---------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 76533 2445678899999999999999999999999999999998888644432211
Q ss_pred hhcC-cccccc------------------------------------CC-CCCC----CCHHHHHHHHHHHHHhhccCCC
Q 003481 685 VSCG-KLSSIL------------------------------------DP-LAGD----WPTFVARRLVDLGLQCCELYGR 722 (816)
Q Consensus 685 ~~~~-~~~~~~------------------------------------d~-~~~~----~~~~~~~~l~~Li~~cl~~dP~ 722 (816)
+..+ +....+ .| .... .+......+.+++++||.+||.
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 0000 000000 01 0000 1113445789999999999999
Q ss_pred CCCCChHHHHHHHHH
Q 003481 723 ERPDITPSLVKELEQ 737 (816)
Q Consensus 723 ~RPs~~e~l~~~Le~ 737 (816)
+|+|..+++.|.+-.
T Consensus 492 ~R~tp~qal~Hpfl~ 506 (586)
T KOG0667|consen 492 ERITPAQALNHPFLT 506 (586)
T ss_pred hcCCHHHHhcCcccc
Confidence 999999888877654
No 296
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7.1e-34 Score=304.77 Aligned_cols=251 Identities=22% Similarity=0.296 Sum_probs=194.3
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
+|+..+.||.|++|.||+|++. |..||||++...... ....+.+|+.++++++||||++++++|.+ ..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788899999999999999985 889999998765433 34567789999999999999999999844 589999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++ +|.+++........+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 75 88888866554456899999999999999999999987 99999999999999999999999999976543221
Q ss_pred CCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---HhhcC------------c
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSCG------------K 689 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~~~~------------~ 689 (816)
......+++.|++||++.+. .++.++|||||||++|+|++|+.||........ ..... .
T Consensus 156 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 156 -----TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred -----ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc
Confidence 12334578899999987654 578999999999999999999999964432111 00000 0
Q ss_pred cccccC-------CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 690 LSSILD-------PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 690 ~~~~~d-------~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...... .....+....+..+.+++.+||+.||.+||++.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 279 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDAL 279 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHh
Confidence 000000 000111123456789999999999999999998544
No 297
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.7e-34 Score=302.64 Aligned_cols=238 Identities=26% Similarity=0.309 Sum_probs=197.2
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
+|...+.||.|+||.||+|.+. +..||+|.+..... .....+.+|+.++++++||||+++++++.+ ..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5788899999999999999886 88999999976432 335678899999999999999999998843 5899999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+.+++|.+++... .++++..+..|+.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999998664 36889999999999999999999987 9999999999999999999999999988765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~ 701 (816)
......|+..|+|||++.+..++.++||||||+++|+|++|..||..... ......... ......
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~ 221 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE------TADVLY 221 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc------cccccC
Confidence 12345688899999999888899999999999999999999999975432 111111111 011223
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
+...+..+.+++.+||..||.+||++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~R~~~ 247 (258)
T cd05578 222 PATWSTEAIDAINKLLERDPQKRLGD 247 (258)
T ss_pred cccCcHHHHHHHHHHccCChhHcCCc
Confidence 44456789999999999999999999
No 298
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.1e-33 Score=301.43 Aligned_cols=247 Identities=25% Similarity=0.361 Sum_probs=184.4
Q ss_pred eeeeecceEEEEEEEc-C---eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCc
Q 003481 477 KVGQGGFGCVYKGEML-G---RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 549 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~-g---~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gs 549 (816)
.||+|+||.||+|... + ..+++|.+..... .....|.+|+.++..++||||++++++|.+ ..++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5999999999999754 2 3466777655432 345679999999999999999999999854 4789999999999
Q ss_pred hhhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCC
Q 003481 550 LQDRLFRKSN-VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 628 (816)
Q Consensus 550 L~~~l~~~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 628 (816)
|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~--- 155 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI--- 155 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhh---
Confidence 9999976432 245677788899999999999999987 999999999999999999999999998643221110
Q ss_pred ccccCCCCCCCCCCCcccccc-------CCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--HHHHhhcCccccccCCCC
Q 003481 629 FHRSTAPKGSFPYADPEYHRT-------GVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~-------~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~~~~~~~~~~~~~~d~~~ 698 (816)
.......++..|+|||++.. ..++.++|||||||++|||++ |..||..... ....+..+....+.++.
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (268)
T cd05086 156 -ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQ- 233 (268)
T ss_pred -hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCc-
Confidence 11234568899999998743 245789999999999999997 5778854332 11222222222233332
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+...+..+.+++..|| .+|.+||++. ++++.|
T Consensus 234 --~~~~~~~~~~~l~~~c~-~~P~~Rp~~~-~i~~~l 266 (268)
T cd05086 234 --LELPYSERWYEVLQFCW-LSPEKRATAE-EVHRLL 266 (268)
T ss_pred --cCCCCcHHHHHHHHHHh-hCcccCCCHH-HHHHHh
Confidence 22234567888999999 6899999999 455544
No 299
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.4e-33 Score=306.74 Aligned_cols=243 Identities=27% Similarity=0.350 Sum_probs=192.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCcccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~ 542 (816)
..|...+.||+|+||.||+|... +..||+|.+...... ....+.+|+.++..++||||++++++|. +..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888889999999999999874 889999998654332 2346889999999999999999999984 4588999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+. |+|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9996 57777665433 35899999999999999999999987 999999999999999999999999998765432
Q ss_pred CCcCCCccccCCCCCCCCCCCccccc---cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~ 699 (816)
....+++.|+|||++. .+.++.++||||||+++|+|+||++||...+..........- . .+.
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~--~~~-- 233 (307)
T cd06607 169 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-D--SPT-- 233 (307)
T ss_pred ----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-C--CCC--
Confidence 2345788999999874 456889999999999999999999999654432221111000 0 000
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
-.+...+..+.+++.+||..+|.+||++.+.+.+
T Consensus 234 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 234 LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1122356689999999999999999999965543
No 300
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=7.9e-34 Score=305.81 Aligned_cols=250 Identities=22% Similarity=0.336 Sum_probs=190.1
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
++|.....||.|+||.||+|... ++.||||.+...... ....+.+|+.++++++||||+++++++.+ ..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999875 789999998654322 23457789999999999999999999854 48899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+.+ +|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 975 8999886544 36889999999999999999999988 99999999999999999999999999875432111
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHh----h---c---Cccccc
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV----S---C---GKLSSI 693 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~----~---~---~~~~~~ 693 (816)
......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.........+ . . ..+...
T Consensus 159 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGV 232 (291)
T ss_pred ------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhh
Confidence 1123356889999998865 458899999999999999999999996443111110 0 0 000000
Q ss_pred c---------CCCCC-----CCCHHH--HHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 694 L---------DPLAG-----DWPTFV--ARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 694 ~---------d~~~~-----~~~~~~--~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
. .+... ...... ...+.+++.+||+.+|.+||++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l 286 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAM 286 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHh
Confidence 0 00000 000011 26788999999999999999998544
No 301
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.7e-34 Score=301.12 Aligned_cols=244 Identities=27% Similarity=0.382 Sum_probs=197.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|...+.||.|+||.||+|... |..||+|.+..... .....+.+|+.+++.++||||+++++.+.+ ..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5778889999999999999885 78899999865432 334568899999999999999999998844 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC-CeeEeecccceeccCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLVTEDT 623 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-~vkL~DFGla~~~~~~~ 623 (816)
+++++|.+++..... ..+++..+..|+.|++.||.|||+.+ ++|+||||+||+++.++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999999876432 35899999999999999999999988 99999999999999885 46999999988765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~~~~~~~~d~~~~~~ 701 (816)
. ......|++.|+|||++.+..++.++||||||+++|+|++|..||......... ...+. +. ..
T Consensus 157 ~------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~----~~ 222 (257)
T cd08225 157 E------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY----FA----PI 222 (257)
T ss_pred c------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc----CC----CC
Confidence 1 123346899999999998888999999999999999999999999754322111 11111 11 12
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
+...+..+.+++.+||..+|++||++.+.+.
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 2234568999999999999999999996543
No 302
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=6.4e-34 Score=305.10 Aligned_cols=249 Identities=23% Similarity=0.299 Sum_probs=191.8
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
|...+.||.|++|.||+|.+. |..||+|++..... .....+.+|+.+++.++||||+++++++.+ ..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999874 89999999875532 223568899999999999999999999844 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
+ ++|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 5 689998865432 35899999999999999999999987 99999999999999999999999999976543221
Q ss_pred CCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh---c-Cc-----------
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS---C-GK----------- 689 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~---~-~~----------- 689 (816)
......+++.|+|||++.+. .++.++||||||+++|+|++|++||........... . +.
T Consensus 155 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 -----TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred -----ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 12333578899999987654 578999999999999999999999964443221111 0 00
Q ss_pred -------cccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 690 -------LSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 690 -------~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+.....+.........+..+.+++.+||+.+|.+||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 000000011111223456889999999999999999998554
No 303
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-35 Score=289.25 Aligned_cols=243 Identities=23% Similarity=0.340 Sum_probs=191.3
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEecccc--CCccceeeccCCCc
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVYEYLPNGS 549 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~-HpnIv~l~g~~~--~~~~lV~E~~~~gs 549 (816)
..||.|..|.|++++.. |...|||.+..... ...+++...++++...+ +|+||+.+|+|- .+.++.||.| ...
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~C 176 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-STC 176 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HHH
Confidence 45999999999999987 68999999977644 44567888888887775 999999999983 4578999988 345
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCc
Q 003481 550 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 629 (816)
Q Consensus 550 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 629 (816)
++.+|.+.. .++++..+-++...++.||.||...+ +|+|||+||+|||||..|++||||||++-.+.+...
T Consensus 177 ~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA----- 247 (391)
T KOG0983|consen 177 AEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA----- 247 (391)
T ss_pred HHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccc-----
Confidence 566665544 46888888899999999999999865 699999999999999999999999999988765542
Q ss_pred cccCCCCCCCCCCCcccccc---CCCCcchhHhHHHHHHHHHHhCCCCCCChHH---HHHHhhcCccccccCCCCCCCCH
Q 003481 630 HRSTAPKGSFPYADPEYHRT---GVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 630 ~~~~~~~gt~~Y~aPE~~~~---~~~s~ksDVwSlGviL~elltG~~Pf~~~~~---~~~~~~~~~~~~~~d~~~~~~~~ 703 (816)
.+..+|-+.|||||.+.. ..|+..+||||||+.|+||.||+.||...+. +...+.. ... |.. ....
T Consensus 248 --htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~eP----P~L-~~~~ 319 (391)
T KOG0983|consen 248 --HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEP----PLL-PGHM 319 (391)
T ss_pred --cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCC----CCC-Cccc
Confidence 355679999999998853 4688999999999999999999999976332 2222222 111 111 1122
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 704 FVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
..++.+.+++..||..|+.+||...+.+.+.+-
T Consensus 320 gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi 352 (391)
T KOG0983|consen 320 GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFI 352 (391)
T ss_pred CcCHHHHHHHHHHhhcCcccCcchHHHhcCcce
Confidence 367899999999999999999999976655543
No 304
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.2e-33 Score=300.80 Aligned_cols=248 Identities=24% Similarity=0.401 Sum_probs=194.9
Q ss_pred CCCccceeeeecceEEEEEEEc---CeEEEEEEeccCCc----------ccHHHHHHHHHHHhc-CCCCceeeEeccccC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNM----------QGQLEFQQEVRVLSK-LQHPHLVTLLGACPE 536 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~---g~~vAiK~l~~~~~----------~~~~~~~~E~~il~~-l~HpnIv~l~g~~~~ 536 (816)
+|.+...||+|+||.||+|.+. +..+|+|.+..... .....+.+|+.++.+ ++||||++++++|.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 4778889999999999999985 47899998854321 123457788888875 799999999998843
Q ss_pred --CccceeeccCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeec
Q 003481 537 --AWSLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 613 (816)
Q Consensus 537 --~~~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DF 613 (816)
..++||||+++++|.+++... .....+++..++.++.|++.||.|||+.+ +++|+||+|+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 588999999999999987542 22346899999999999999999999632 3999999999999999999999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccc
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLS 691 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~ 691 (816)
|++....... ......|+..|++||++.++.++.++||||||+++|+|++|+.||....... ..+..+...
T Consensus 159 g~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 231 (269)
T cd08528 159 GLAKQKQPES-------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE 231 (269)
T ss_pred cceeeccccc-------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC
Confidence 9998765432 1234568999999999998889999999999999999999999996543321 122222211
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 692 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 692 ~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+.. ....+..+.+++.+||+.||.+||++. ++..++
T Consensus 232 ----~~~---~~~~~~~l~~li~~cl~~~p~~Rp~~~-e~~~~~ 267 (269)
T cd08528 232 ----PLP---EGMYSEDVTDVITSCLTPDAEARPDII-QVSAMI 267 (269)
T ss_pred ----cCC---cccCCHHHHHHHHHHCCCCCccCCCHH-HHHHHh
Confidence 111 112456899999999999999999999 455444
No 305
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.7e-33 Score=295.92 Aligned_cols=248 Identities=26% Similarity=0.393 Sum_probs=203.2
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC----Ccccee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVY 542 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~lV~ 542 (816)
+|...+.||+|++|.||+|... +..|++|++..... .....+.+|+.++++++||||+++++.+.+ ..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777889999999999999986 88999999876553 345678899999999999999999998843 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||+++++|.+++.... .+++..++.++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999987654 6899999999999999999999977 999999999999999999999999999887654
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH-HhhcCccccccCCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR-AVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-~~~~~~~~~~~d~~~~~~ 701 (816)
... .......++..|+|||.+....++.++||||||+++|+|++|..||........ ...... .......
T Consensus 155 ~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~ 225 (260)
T cd06606 155 ETG----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-----SGEPPEI 225 (260)
T ss_pred ccc----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-----cCCCcCC
Confidence 321 012345688999999999888899999999999999999999999975442111 111110 0112234
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+...+..+.+++.+|+..+|.+||++.+.+.+
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 44557899999999999999999999965543
No 306
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=6.1e-34 Score=306.22 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=191.0
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEecccc--CCccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~-HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
+|.....||+|+||.||++.+. +..||+|.+..... .....+.+|+.++.++. ||||+++++++. ...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3455678999999999999885 78999999875433 34456889999999996 999999999873 357899999
Q ss_pred cCCCchhhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHHHhhc-CCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 545 LPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSS-KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 545 ~~~gsL~~~l---~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
+.. +|.++. ... ....+++..+..++.+++.||.|||+. + |+||||||+|||++.++.+||+|||++....
T Consensus 85 ~~~-~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 85 MDI-SLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ccC-CHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 854 555433 222 124689999999999999999999985 5 9999999999999999999999999997654
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccC---CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCC
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRTG---VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPL 697 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~ 697 (816)
... ......|++.|+|||++.+. .++.++|||||||++|+|++|+.||.........+.... . ...+.
T Consensus 160 ~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~-~~~~~ 230 (288)
T cd06616 160 DSI-------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVV-K-GDPPI 230 (288)
T ss_pred cCC-------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhc-C-CCCCc
Confidence 322 12334688999999998766 689999999999999999999999965432222211110 0 00011
Q ss_pred -CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 698 -AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 698 -~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
....+..++..+.+|+.+||+.+|.+||++.+.+.+.+
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~ 269 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPF 269 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 11122336678999999999999999999996665443
No 307
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.4e-34 Score=306.98 Aligned_cols=253 Identities=23% Similarity=0.248 Sum_probs=192.0
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCC-CCceeeEeccccC--C-----
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--A----- 537 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~--~----- 537 (816)
++|...+.||.|+||.||+|.+. +..||||.+..... .....+.+|+.++..+. ||||+++++++.. .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999885 78999998765432 23356888999999995 6999999998732 2
Q ss_pred ccceeeccCCCchhhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC-CCCeeEeecc
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFG 614 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~-~~~vkL~DFG 614 (816)
.++||||+++ +|.+++..... ...+++..++.++.||+.||.|||+.+ |+||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 6899999985 78888765432 246899999999999999999999987 999999999999998 8899999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc----C-
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----G- 688 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----~- 688 (816)
++........ ......+++.|+|||++.+ ..++.++||||||+++|+|++|..||............ +
T Consensus 157 ~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (295)
T cd07837 157 LGRAFSIPVK------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGT 230 (295)
T ss_pred cceecCCCcc------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9886543211 1233457889999998764 45799999999999999999999999654433221110 0
Q ss_pred -cc---cccc---C----C-----CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 689 -KL---SSIL---D----P-----LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 689 -~~---~~~~---d----~-----~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.. .... + + .........+..+.++|.+||..||.+||++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0000 0 0 000001235667999999999999999999986553
No 308
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=6.6e-34 Score=304.41 Aligned_cols=236 Identities=25% Similarity=0.362 Sum_probs=190.1
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCCch
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSL 550 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~gsL 550 (816)
||+|+||+||++... |..||+|.+..... .....+.+|+.+|++++||||+++++++. +..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999875 88999999865432 22345678999999999999999999874 458999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcc
Q 003481 551 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 630 (816)
Q Consensus 551 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 630 (816)
.+++..... ..+++..++.++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~------- 149 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK------- 149 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC-------
Confidence 999876543 46899999999999999999999987 9999999999999999999999999987654322
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003481 631 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 708 (816)
Q Consensus 631 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 708 (816)
......++..|+|||++.++.++.++|||||||++|+|++|+.||..... ....+..... ......+...+..
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 224 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL-----EMAVEYPDKFSPE 224 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc-----cccccCCccCCHH
Confidence 12344678899999999888899999999999999999999999964432 1111111111 1112233445678
Q ss_pred HHHHHHHhhccCCCCCCCChH
Q 003481 709 LVDLGLQCCELYGRERPDITP 729 (816)
Q Consensus 709 l~~Li~~cl~~dP~~RPs~~e 729 (816)
+.+++.+||+.+|.+||++.+
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHccCChhHccCCCc
Confidence 999999999999999997765
No 309
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.3e-33 Score=304.53 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=193.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecccc----CCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~----~~~~lV 541 (816)
++|...+.||.|+||.||+|.+. +..|++|.+...... ....+.+|+.++.+++||||+++++++. ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888889999999999999986 788999998754332 2235678999999999999999999873 458999
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+. ++|.+++.... ..+++..++.|+.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 58988886644 36899999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhc-----------
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSC----------- 687 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~----------- 687 (816)
... ......+++.|+|||++.+. .++.++||||||+++|+|++|.+||......... +..
T Consensus 159 ~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 159 PLK------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred Ccc------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 321 12334578899999988654 4689999999999999999999999643321110 000
Q ss_pred ----------CccccccC-CCCCCCCHH-HHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 688 ----------GKLSSILD-PLAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 688 ----------~~~~~~~d-~~~~~~~~~-~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
........ .....++.. .+..+.+|+.+||+.+|++||++.+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000 001112222 4678899999999999999999986553
No 310
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.7e-33 Score=298.87 Aligned_cols=247 Identities=26% Similarity=0.328 Sum_probs=197.7
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-----cccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-----MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 538 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-----~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~ 538 (816)
.+|.+.+.||+|+||.||+|.+. +..||+|.+.... ......+.+|+.++++++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47889999999999999999874 7899999875431 1233468899999999999999999998743 36
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++|+||+++++|.+++.... .+++..+..|+.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence 78999999999999986543 4788999999999999999999988 99999999999999999999999999986
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCC
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~ 698 (816)
....... ........|+..|+|||++.+..++.++|||||||++|+|++|+.||............. ..+..
T Consensus 156 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~ 227 (264)
T cd06653 156 IQTICMS---GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA-----TQPTK 227 (264)
T ss_pred ccccccc---CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH-----cCCCC
Confidence 5432110 011233568999999999988889999999999999999999999997544332221111 11122
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
...|...+..+.+++.+||. +|..||+..+.+
T Consensus 228 ~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~ 259 (264)
T cd06653 228 PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLL 259 (264)
T ss_pred CCCCcccCHHHHHHHHHHhc-CcccCccHHHHh
Confidence 33566677889999999999 579999998544
No 311
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.7e-33 Score=312.47 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=195.9
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE------- 536 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------- 536 (816)
..++|...+.||+|+||.||+|... +..||||.+.... ......+.+|+.++.+++||||++++++|..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999875 8899999986432 2334567789999999999999999998732
Q ss_pred -CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccc
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 615 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGl 615 (816)
..++||||+. ++|.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence 3589999995 578877743 2788899999999999999999987 99999999999999999999999999
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--h-h-cC---
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--V-S-CG--- 688 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~-~-~~--- 688 (816)
++...... ......+++.|+|||++.+..++.++|||||||++|+|++|+.||...+..... + . .+
T Consensus 165 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (353)
T cd07850 165 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS 237 (353)
T ss_pred ceeCCCCC-------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 98764332 123346889999999999999999999999999999999999999643321110 0 0 00
Q ss_pred ------------------c------cccccC----CC-CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 689 ------------------K------LSSILD----PL-AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 689 ------------------~------~~~~~d----~~-~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
. +..++. +. ....+...+..+.+|+.+||+.||.+||++.++|.+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~ 313 (353)
T cd07850 238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313 (353)
T ss_pred HHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence 0 000000 00 00012234667899999999999999999998776654
No 312
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=331.43 Aligned_cols=247 Identities=28% Similarity=0.334 Sum_probs=201.5
Q ss_pred HHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC
Q 003481 462 LADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE 536 (816)
Q Consensus 462 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~ 536 (816)
+.+++.-..+|.+.+.||+|+||.|..++.. ++.||+|++++..+ ....-|..|-++|..-+.+.|++|+.+|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3455555678899999999999999999886 78899999987543 334568999999999999999999999965
Q ss_pred --CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 537 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 537 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
++|+||+||+||+|-.+|.+.. ++++..+..++..|..||.-||+.| +|||||||+|||||.+|++||+|||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccch
Confidence 5899999999999999997654 6888999999999999999999998 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCccccc----c-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCc
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR----T-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK 689 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~ 689 (816)
.|-.+..+.. -.....+|||.|++||++. + +.|++.+|+||+||++|||+.|..||....-+..+ |+
T Consensus 221 sClkm~~dG~-----V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY---~K 292 (1317)
T KOG0612|consen 221 SCLKMDADGT-----VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETY---GK 292 (1317)
T ss_pred hHHhcCCCCc-----EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHH---HH
Confidence 9988875442 2457789999999999885 2 57999999999999999999999999644333222 11
Q ss_pred cccccCC-CCCCCC--HHHHHHHHHHHHHhhccCCCCCCC
Q 003481 690 LSSILDP-LAGDWP--TFVARRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 690 ~~~~~d~-~~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs 726 (816)
+++. ..-.|| ..++....+||.+.+. +|..|-.
T Consensus 293 ---Im~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg 328 (1317)
T KOG0612|consen 293 ---IMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLG 328 (1317)
T ss_pred ---HhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc
Confidence 1111 112334 3478889999988776 5777776
No 313
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-35 Score=342.04 Aligned_cols=257 Identities=26% Similarity=0.326 Sum_probs=207.7
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccc--cCC
Q 003481 464 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGAC--PEA 537 (816)
Q Consensus 464 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~ 537 (816)
-+...+-+|.....||.|.||.||.|... |...|+|-+...... ....+.+|+.+|..|+|||+|++||+- .+.
T Consensus 1229 ~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek 1308 (1509)
T KOG4645|consen 1229 SLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK 1308 (1509)
T ss_pred HhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH
Confidence 45667788999999999999999999875 888999987655433 334578999999999999999999985 456
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.+|.||||.+|+|.+.+.... -.++.....+..|++.||.|||++| ||||||||.||||+.+|.+|++|||.|.
T Consensus 1309 v~IFMEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAV 1382 (1509)
T ss_pred HHHHHHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeeccccee
Confidence 899999999999999886543 2445556677899999999999998 9999999999999999999999999999
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccC---CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---HhhcCccc
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG---VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSCGKLS 691 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~~~~~~~ 691 (816)
.+.......+ ..-....||+.|||||++.+. ...-+.||||||||++||+||+.||...+.-+. .+..|..
T Consensus 1383 ki~~~~~~~~--~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~- 1459 (1509)
T KOG4645|consen 1383 KIKNNAQTMP--GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHK- 1459 (1509)
T ss_pred EecCchhcCC--HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCC-
Confidence 8876542222 223467899999999998643 456799999999999999999999974443222 2333333
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 692 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 692 ~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+++|...+..-.+++..||..||+.|.++.|.+.+.+-
T Consensus 1460 -------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1460 -------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred -------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence 34577788999999999999999999888766655543
No 314
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-35 Score=295.59 Aligned_cols=239 Identities=27% Similarity=0.314 Sum_probs=200.0
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHH---HHHHHHHHHhcCCCCceeeEeccc--cCCcccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQL---EFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~---~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~ 542 (816)
++|...+.||+|.||.|.+++-. ++.+|||++++.-..... .-..|-++|...+||.+..|-..| .+.+|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 67888899999999999999875 899999999887654444 356789999999999999987777 45699999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
||..||.|.-+|.+.. .+++....-+-.+|+.||.|||+.+ ||.||||.+|+|||.+|++||+|||+++.--..
T Consensus 248 eyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 248 EYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccc
Confidence 9999999999987754 4666777778999999999999988 999999999999999999999999999864332
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 702 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~ 702 (816)
. ......+|||.|+|||++....|+.++|+|.+||++|||++|+.||...+. +++.+++-.....+|
T Consensus 322 g------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh-------~kLFeLIl~ed~kFP 388 (516)
T KOG0690|consen 322 G------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH-------EKLFELILMEDLKFP 388 (516)
T ss_pred c------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch-------hHHHHHHHhhhccCC
Confidence 2 235678999999999999999999999999999999999999999964443 122222222223567
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 703 TFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 703 ~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
...+++...|+...|..||.+|-.-
T Consensus 389 r~ls~eAktLLsGLL~kdP~kRLGg 413 (516)
T KOG0690|consen 389 RTLSPEAKTLLSGLLKKDPKKRLGG 413 (516)
T ss_pred ccCCHHHHHHHHHHhhcChHhhcCC
Confidence 7788899999999999999999643
No 315
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.9e-33 Score=304.92 Aligned_cols=258 Identities=18% Similarity=0.212 Sum_probs=194.7
Q ss_pred ccceeeeecceEEEEEEEcCeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCCc
Q 003481 474 ESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGS 549 (816)
Q Consensus 474 ~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~gs 549 (816)
+.+.+|.|+++.||++...+..||||++.... ......+.+|+.+++.++||||+++++++. +..+++|||+++|+
T Consensus 6 i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33445666777777777789999999997652 334467899999999999999999999884 35889999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc-CCC
Q 003481 550 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY-LPS 628 (816)
Q Consensus 550 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~ 628 (816)
|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||.+......... ...
T Consensus 86 l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 86 CEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 9999876532 35888999999999999999999988 999999999999999999999999998765432211 001
Q ss_pred ccccCCCCCCCCCCCcccccc--CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh--cCccccccC---------
Q 003481 629 FHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLSSILD--------- 695 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--~~~~~~~~d--------- 695 (816)
........++..|+|||++.. ..++.++|||||||++|+|++|..||........... .+.....++
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence 111234557889999999865 3588999999999999999999999975443222211 111111110
Q ss_pred -----------C-----CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 696 -----------P-----LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 696 -----------~-----~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+ .....+...+..+.+|+.+||..||.+||++.+.+.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 0 011223345678999999999999999999997665444
No 316
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.9e-33 Score=296.55 Aligned_cols=232 Identities=26% Similarity=0.345 Sum_probs=191.3
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCch
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 550 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL 550 (816)
||.|+||.||++++. +..||+|++..... .....+.+|+.+++.++||||+++++++.+ ..++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999997 88999999875433 234568999999999999999999998843 48899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcc
Q 003481 551 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 630 (816)
Q Consensus 551 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 630 (816)
.+++.+.. .+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~------- 147 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ------- 147 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-------
Confidence 99996643 4888999999999999999999987 9999999999999999999999999998765432
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH--H--HHHHhhcCccccccCCCCCCCCHHHH
Q 003481 631 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--E--VRRAVSCGKLSSILDPLAGDWPTFVA 706 (816)
Q Consensus 631 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~--~--~~~~~~~~~~~~~~d~~~~~~~~~~~ 706 (816)
......|++.|++||.+....++.++|+||||+++|+|++|..||.... . ....+..+ .....+|...+
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 220 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKG-------NGKLEFPNYID 220 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhcc-------CCCCCCCcccC
Confidence 1233468899999999988889999999999999999999999997544 1 11111111 11223344446
Q ss_pred HHHHHHHHHhhccCCCCCCCChH
Q 003481 707 RRLVDLGLQCCELYGRERPDITP 729 (816)
Q Consensus 707 ~~l~~Li~~cl~~dP~~RPs~~e 729 (816)
..+.+++.+||+.+|.+||++.+
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~ 243 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLK 243 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcc
Confidence 78999999999999999999643
No 317
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.3e-33 Score=309.20 Aligned_cols=256 Identities=21% Similarity=0.301 Sum_probs=193.4
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-------C
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------A 537 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------~ 537 (816)
.+++|.+.+.||+|+||.||+|.+. |..||||.+..... .....+.+|+.++.+++||||+++++++.. .
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3568999999999999999999875 78999999864322 234567889999999999999999987632 3
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.++|+||+. ++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~ 154 (336)
T cd07849 83 VYIVQELME-TDLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLAR 154 (336)
T ss_pred EEEEehhcc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECccccee
Confidence 689999996 477777643 35899999999999999999999988 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH------hhc---
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA------VSC--- 687 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~------~~~--- 687 (816)
......... .......||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+..... +..
T Consensus 155 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~ 231 (336)
T cd07849 155 IADPEHDHT---GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQ 231 (336)
T ss_pred ecccccccc---CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 764432111 11234568999999998654 56899999999999999999999999643221100 000
Q ss_pred CccccccCC----------C--CCCC---CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 688 GKLSSILDP----------L--AGDW---PTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 688 ~~~~~~~d~----------~--~~~~---~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
..+..+.+. . ...+ ....+..+.+|+.+||+.+|.+||++.+.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp 293 (336)
T cd07849 232 EDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHP 293 (336)
T ss_pred HHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 000000000 0 0000 112356789999999999999999999666543
No 318
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5e-33 Score=303.93 Aligned_cols=242 Identities=25% Similarity=0.347 Sum_probs=191.7
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
|...+.||+|+||.||+|++. +..||+|.+...... ....+.+|+.++++++|||+++++++|.+ ..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667788999999999999874 789999998754322 23468899999999999999999999843 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+. |+|.+.+.... .+++|..+..++.+++.||.|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 107 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 96 47777775443 45899999999999999999999988 999999999999999999999999998654321
Q ss_pred cCCCccccCCCCCCCCCCCccccc---cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAG 699 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~ 699 (816)
....|++.|+|||++. .+.++.++|||||||++|+|++|+.||....... ..+..+... .
T Consensus 179 --------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-------~ 243 (317)
T cd06635 179 --------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP-------T 243 (317)
T ss_pred --------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC-------C
Confidence 2346889999999873 4578999999999999999999999986443221 111111111 0
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
..+...+..+.+|+.+||+.+|.+||++.+.+.+.+.
T Consensus 244 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 244 LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 1122345679999999999999999999965554443
No 319
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5.3e-33 Score=292.14 Aligned_cols=243 Identities=27% Similarity=0.405 Sum_probs=200.6
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|.....||+|++|.||++... +..|++|.+..... .....+.+|++++.+++|||++++++++.+ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778889999999999999875 78899999977654 344578999999999999999999998843 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999998655 36899999999999999999999987 99999999999999999999999999987765432
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHH
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
. .....++..|+|||.+.+..++.++||||||+++|+|++|..||.............. ......+..
T Consensus 155 ~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~ 222 (254)
T cd06627 155 D------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ------DDHPPLPEG 222 (254)
T ss_pred c------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc------cCCCCCCCC
Confidence 1 2345688999999999888889999999999999999999999975443322222110 111223444
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.+..+.+++.+||..+|++||++.+.+
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l 249 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQLL 249 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHHHh
Confidence 567899999999999999999998544
No 320
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.4e-33 Score=302.60 Aligned_cols=253 Identities=23% Similarity=0.273 Sum_probs=190.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
++|.....||.|++|.||+|.+. |+.||+|.+..... .....+.+|+.++++++||||+++++++.+ ..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999875 78999999865432 223568899999999999999999999843 5889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC-CCCeeEeecccceeccCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFGICRLVTED 622 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~-~~~vkL~DFGla~~~~~~ 622 (816)
|++ ++|.+++..... ..+++..+..++.||+.||.|||+.+ |+|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 995 578777754432 34678888999999999999999987 999999999999985 557999999999765432
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc----Cc-ccccc--
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK-LSSIL-- 694 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----~~-~~~~~-- 694 (816)
.. ......+++.|+|||++.+ ..++.++|||||||++|+|+||.+||............ +. .....
T Consensus 157 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 157 VR------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred cc------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 21 1233467899999998865 45789999999999999999999999644322111100 00 00000
Q ss_pred -----C----------CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 695 -----D----------PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 695 -----d----------~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+ ..........+..+.+++.+||+.+|.+||++.+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00000112345678999999999999999999966543
No 321
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-33 Score=305.10 Aligned_cols=244 Identities=22% Similarity=0.317 Sum_probs=184.4
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCCceeeEeccccC--Cccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~---~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E 543 (816)
-|..++.||-|+||.|-+++.. ...||+|.|.+.+.-. ...+..|.+||....++.||+||..|.+ .+|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 4667788999999999998653 6679999998765432 2357789999999999999999999954 5999999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC-
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED- 622 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~- 622 (816)
|++||++..+|.+.+ .+.+..+..++.++..|+++.|..| +|||||||+|||||.+|++||+|||||.-+...
T Consensus 710 YIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999998876 4667778888999999999999998 999999999999999999999999999754321
Q ss_pred -C-CcCCCc---------------------------------cccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHH
Q 003481 623 -T-LYLPSF---------------------------------HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQ 667 (816)
Q Consensus 623 -~-~~~~~~---------------------------------~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~e 667 (816)
. .+-... ......+||+.|+|||++....|+..+|+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 1 000000 00114579999999999999999999999999999999
Q ss_pred HHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHH-hhccCCCCCC
Q 003481 668 LLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQ-CCELYGRERP 725 (816)
Q Consensus 668 lltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~-cl~~dP~~RP 725 (816)
|+.|++||.............++...++- .+....+.+..+||.+ |+. ++.|-
T Consensus 864 m~~g~~pf~~~tp~~tq~kv~nw~~~l~~---~~~~~ls~e~~~li~kLc~s--ad~RL 917 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGETQYKVINWRNFLHI---PYQGNLSKEALDLIQKLCCS--ADSRL 917 (1034)
T ss_pred HhhCCCCccCCCCCcceeeeeehhhcccc---ccccccCHHHHHHHHHHhcC--hhhhh
Confidence 99999999643322222222223333332 1223345566666655 444 34454
No 322
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=4.2e-33 Score=301.26 Aligned_cols=256 Identities=21% Similarity=0.280 Sum_probs=181.2
Q ss_pred cCCCccceeeeecceEEEEEEEcC-----eEEEEEEeccCCcccH-----------HHHHHHHHHHhcCCCCceeeEecc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLG-----RTVAIKMLYSHNMQGQ-----------LEFQQEVRVLSKLQHPHLVTLLGA 533 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g-----~~vAiK~l~~~~~~~~-----------~~~~~E~~il~~l~HpnIv~l~g~ 533 (816)
+.|.+.+.||+|+||.||+|.+.+ ..+|+|+......... .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 579999999999999999998753 3567776433322111 012234455667799999999987
Q ss_pred ccCC------ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCC
Q 003481 534 CPEA------WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 607 (816)
Q Consensus 534 ~~~~------~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~ 607 (816)
+... .+++++++. .++.+.+... ...++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 6322 356777763 3566655432 23578889999999999999999987 999999999999999999
Q ss_pred eeEeecccceeccCCCCcCC-CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH---HHH
Q 003481 608 SKICDFGICRLVTEDTLYLP-SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRR 683 (816)
Q Consensus 608 vkL~DFGla~~~~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~---~~~ 683 (816)
++|+|||+|+.+........ .........||+.|+|||++.+..++.++|||||||+||||++|+.||..... ...
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987643221110 01112345699999999999999999999999999999999999999964421 111
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 684 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 684 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
....+.+..+..+.. . ....+..+.+++..|+..+|.+||++. .|.+.|
T Consensus 245 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~rp~~~-~l~~~~ 293 (294)
T PHA02882 245 AAKCDFIKRLHEGKI-K-IKNANKFIYDFIECVTKLSYEEKPDYD-ALIKIF 293 (294)
T ss_pred HhHHHHHHHhhhhhh-c-cCCCCHHHHHHHHHHHhCCCCCCCCHH-HHHHhh
Confidence 111111111111100 0 112356799999999999999999998 565544
No 323
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.6e-33 Score=301.51 Aligned_cols=241 Identities=22% Similarity=0.338 Sum_probs=194.0
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCCchh
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQ 551 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~gsL~ 551 (816)
.+||+|+||.||++... +..||||.+..........+.+|+.+++.++||||+++++++. +..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 56999999999999884 7899999986555455567899999999999999999999873 4689999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccc
Q 003481 552 DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 631 (816)
Q Consensus 552 ~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 631 (816)
+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........ .
T Consensus 106 ~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~------~ 172 (292)
T cd06657 106 DIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------R 172 (292)
T ss_pred HHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc------c
Confidence 97743 24789999999999999999999987 99999999999999999999999999876543221 1
Q ss_pred cCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCCCCCHHHHHHH
Q 003481 632 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTFVARRL 709 (816)
Q Consensus 632 ~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~l 709 (816)
.....|++.|+|||++.+..++.++||||||+++|+|++|..||....... ..+..+ +. +... .....+..+
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~-~~----~~~~-~~~~~~~~l 246 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LP----PKLK-NLHKVSPSL 246 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-CC----cccC-CcccCCHHH
Confidence 234568899999999988889999999999999999999999996543321 111111 11 1111 112245678
Q ss_pred HHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 710 VDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 710 ~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+++.+||+.+|.+||++.+.+.+.+
T Consensus 247 ~~li~~~l~~~P~~R~~~~~ll~~~~ 272 (292)
T cd06657 247 KGFLDRLLVRDPAQRATAAELLKHPF 272 (292)
T ss_pred HHHHHHHHhCCcccCcCHHHHhcChH
Confidence 89999999999999999997665443
No 324
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.3e-33 Score=305.63 Aligned_cols=200 Identities=25% Similarity=0.298 Sum_probs=164.2
Q ss_pred CCCccceeeeecceEEEEEEE----cCeEEEEEEeccCC---cccHHHHHHHHHHHhcCCCCceeeEeccccC----Ccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEM----LGRTVAIKMLYSHN---MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWS 539 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~----~g~~vAiK~l~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~ 539 (816)
.|.....||+|+||.||+|.. .+..||+|.+.... ......+.+|+.++..++||||++++++|.+ ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 477888999999999999988 46899999997743 2334567889999999999999999999843 478
Q ss_pred ceeeccCCCchhhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC----CCCeeEeec
Q 003481 540 LVYEYLPNGSLQDRLFRKS--NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS----ELSSKICDF 613 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~----~~~vkL~DF 613 (816)
+||||+++ +|.+.+.... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 6666664332 1236889999999999999999999987 999999999999999 899999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCC
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGL 677 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~ 677 (816)
|++......... ........+++.|+|||++.+ ..++.++|||||||++|+|++|++||..
T Consensus 157 g~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 218 (316)
T cd07842 157 GLARLFNAPLKP---LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKG 218 (316)
T ss_pred ccccccCCCccc---ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 999876443211 112344568899999998765 4588999999999999999999999963
No 325
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.9e-33 Score=303.48 Aligned_cols=253 Identities=23% Similarity=0.304 Sum_probs=193.3
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC----Cccc
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSL 540 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~--~~~~~~E~~il~~l~HpnIv~l~g~~~~----~~~l 540 (816)
.++|...+.||.|+||.||+|.+. |..||+|.+....... ...+.+|+.++.+++|+||+++++++.+ ..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357889999999999999999885 8899999986543222 2346689999999999999999998742 3789
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
||||+. ++|.+++.... ..+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 86 v~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999996 47888876543 46899999999999999999999988 9999999999999999999999999998765
Q ss_pred CCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhc--C----ccc
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSC--G----KLS 691 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~--~----~~~ 691 (816)
.... ......+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...+..... +.. + ...
T Consensus 160 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 160 LPAK------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred CccC------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 4321 1233346888999998865 46789999999999999999999999644432111 110 0 000
Q ss_pred ---------cccCCCCCCC------CHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 692 ---------SILDPLAGDW------PTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 692 ---------~~~d~~~~~~------~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
..+.-....+ ....+..+.+||.+||+.||.+||++.+.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000000 01236678899999999999999999965543
No 326
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3e-33 Score=299.35 Aligned_cols=247 Identities=24% Similarity=0.300 Sum_probs=187.4
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEecccc----CCccceee
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP----EAWSLVYE 543 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~-HpnIv~l~g~~~----~~~~lV~E 543 (816)
|...+.||+|+||.||+|... +..||+|.+..... .......+|+.++.++. ||||+++++++. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 566788999999999999874 78999999875432 22234557899999885 999999999884 34789999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+. |+|.+.+.... ..++|..++.++.|++.||.|||+.+ ++||||+|+||+++. +.+||+|||++.......
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 996 57777775543 46899999999999999999999987 999999999999999 999999999998764332
Q ss_pred CcCCCccccCCCCCCCCCCCccccc-cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH--Hhh--cC----------
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVS--CG---------- 688 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~--~~~--~~---------- 688 (816)
. .....++..|+|||++. ++.++.++|||||||++|+|++|.+||...+.... .+. .+
T Consensus 154 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 154 P-------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred C-------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence 1 12345789999999764 45678999999999999999999999964432111 000 00
Q ss_pred ---ccccccCCC-C----CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 689 ---KLSSILDPL-A----GDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 689 ---~~~~~~d~~-~----~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.......+. . .......+..+.+|+.+||+.+|.+||++.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000000 0 0011235678999999999999999999986543
No 327
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.3e-33 Score=308.90 Aligned_cols=257 Identities=19% Similarity=0.262 Sum_probs=196.5
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc------CCc
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP------EAW 538 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~------~~~ 538 (816)
..+|...+.||.|+||.||+|... |..||+|++..... .....+.+|+.+|.+++||||++++++|. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 468999999999999999999875 88999999875432 33456778999999999999999998873 236
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++||||+. |+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence 89999995 68988886443 4899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH-------------
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA------------- 684 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~------------- 684 (816)
....... .........|+..|+|||.+.. ..++.++|||||||++|+|++|+.||...+.....
T Consensus 157 ~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 157 LSSSPTE--HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred ecccCcC--CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 6543211 1111234578999999998765 46899999999999999999999999643321110
Q ss_pred ----hhcCccccccCC--CCCCC-----CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 685 ----VSCGKLSSILDP--LAGDW-----PTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 685 ----~~~~~~~~~~d~--~~~~~-----~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.....+....+. ..... ....+..+.+++.+||+.+|.+||++.+.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 000001100000 00011 123467899999999999999999999666543
No 328
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.6e-33 Score=300.51 Aligned_cols=231 Identities=25% Similarity=0.347 Sum_probs=179.1
Q ss_pred eeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHh---cCCCCceeeEecccc--CCccceeeccC
Q 003481 477 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLS---KLQHPHLVTLLGACP--EAWSLVYEYLP 546 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~---~l~HpnIv~l~g~~~--~~~~lV~E~~~ 546 (816)
.||+|+||.||++... +..||+|.+...... ....+.+|..++. ..+||||+.+++++. +..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 3899999999999875 789999998654322 1223445544433 347999999998874 45889999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+|+|.+++.... .+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--- 151 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence 999999886543 5899999999999999999999988 9999999999999999999999999987654321
Q ss_pred CCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHH-HHHHhhcCccccccCCCCCCCCHH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-VRRAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
.....||+.|+|||.+.+ ..++.++|||||||++|+|++|..||..... ....+..... ......+..
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~ 221 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TVNVELPDS 221 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh-----cCCcCCccc
Confidence 123468999999998864 5689999999999999999999999963221 1111111110 111223445
Q ss_pred HHHHHHHHHHHhhccCCCCCCC
Q 003481 705 VARRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs 726 (816)
.+..+.+++.+||+.||.+||+
T Consensus 222 ~~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 222 FSPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred cCHHHHHHHHHHhcCCHHHhcC
Confidence 6678999999999999999995
No 329
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.7e-33 Score=302.75 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=191.2
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEeccccC--Cccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~--~~~lV~E 543 (816)
++|...+.||.|+||.||+|.+. +..||||.+..... .....+..|+.++.++. ||||++++++|.+ ..++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 56788899999999999999987 88999999976433 23445677887777774 9999999999844 5889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+. ++|.+++.... ..+++..+..++.|++.||.|||+.. +|+||||+|+||+++.++.+||+|||++..+....
T Consensus 95 ~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 95 LMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred ccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 985 57777665533 36899999999999999999999742 39999999999999999999999999987654322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCC----CCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---HhhcCccccccCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGV----LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSCGKLSSILDP 696 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~~~~~~~~~~d~ 696 (816)
......++..|+|||++.+.. ++.++||||||+++|+|++|+.||........ .+..+.....
T Consensus 170 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 239 (296)
T cd06618 170 -------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSL--- 239 (296)
T ss_pred -------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCC---
Confidence 123345788999999987543 78899999999999999999999965322111 1111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 697 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 697 ~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.....++..+.+|+.+||+.||.+||++.+.+.+.+
T Consensus 240 ---~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 240 ---PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 111124567999999999999999999997665554
No 330
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=318.62 Aligned_cols=248 Identities=29% Similarity=0.407 Sum_probs=195.9
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--------Ccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--------AWS 539 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--------~~~ 539 (816)
.|.....||+||||.||+|+.. |+.||||.++... ....+...+|+++|++|+|||||++++.-++ ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 4556678999999999999975 9999999997754 3456678899999999999999999987533 357
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEec--CCC--CeeEeeccc
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD--SEL--SSKICDFGI 615 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~--~~~--~vkL~DFGl 615 (816)
+|||||.||||...|....+...|++.+.+.++.+++.||.|||.++ |+||||||.||++- .+| ..||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999999999888888999999999999999999999988 99999999999993 223 489999999
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccc-cCCCCcchhHhHHHHHHHHHHhCCCCCCChHH-------HHHHhhc
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-------VRRAVSC 687 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~-------~~~~~~~ 687 (816)
|+.+.++. .....+||..|++||.+. .+.|+..+|.|||||++|+++||..||..... .+..+..
T Consensus 171 Arel~d~s-------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tk 243 (732)
T KOG4250|consen 171 ARELDDNS-------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITK 243 (732)
T ss_pred cccCCCCC-------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhcc
Confidence 99988766 346788999999999988 48899999999999999999999999942211 1111100
Q ss_pred ---Ccccccc----CC--------CCCCCCHHHHHHHHHHHHHhhccCCCCCC--CCh
Q 003481 688 ---GKLSSIL----DP--------LAGDWPTFVARRLVDLGLQCCELYGRERP--DIT 728 (816)
Q Consensus 688 ---~~~~~~~----d~--------~~~~~~~~~~~~l~~Li~~cl~~dP~~RP--s~~ 728 (816)
+...... +| ............+-..+..+|..+|.+|. ...
T Consensus 244 kp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~ 301 (732)
T KOG4250|consen 244 KPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFD 301 (732)
T ss_pred CCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcc
Confidence 0000000 00 01112234455677788889999999998 444
No 331
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-33 Score=327.62 Aligned_cols=261 Identities=16% Similarity=0.235 Sum_probs=183.8
Q ss_pred HHHhcCCCccceeeeecceEEEEEEEc---CeEEEEEEe--------------cc---CCcccHHHHHHHHHHHhcCCCC
Q 003481 466 QTATCNFSESFKVGQGGFGCVYKGEML---GRTVAIKML--------------YS---HNMQGQLEFQQEVRVLSKLQHP 525 (816)
Q Consensus 466 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~---g~~vAiK~l--------------~~---~~~~~~~~~~~E~~il~~l~Hp 525 (816)
....++|.+...||+|+||.||++.+. +..+++|.+ .+ ........+.+|+.+|.+++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 345678999999999999999998764 222222211 00 1112234578999999999999
Q ss_pred ceeeEecccc--CCccceeeccCCCchhhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceE
Q 003481 526 HLVTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNIL 601 (816)
Q Consensus 526 nIv~l~g~~~--~~~~lV~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NIL 601 (816)
||+++++++. +..++|++++. ++|.+++..... ........+..|+.||+.||.|||+.+ |+||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEE
Confidence 9999999984 45789999985 567776654321 122345677889999999999999987 999999999999
Q ss_pred ecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCC-CCCCh--
Q 003481 602 LDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL-PVGLA-- 678 (816)
Q Consensus 602 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~-Pf~~~-- 678 (816)
|+.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||+||||++|.. ||...
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREA-----FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred ECCCCCEEEEeCCCceecCccccc-----ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 999999999999999877543211 2234579999999999999999999999999999999999875 44311
Q ss_pred ---HHHHHHhhcC-----ccc-------cccCC-----CCCCCCH-----HHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 679 ---GEVRRAVSCG-----KLS-------SILDP-----LAGDWPT-----FVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 679 ---~~~~~~~~~~-----~~~-------~~~d~-----~~~~~~~-----~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
......+..- .+. ..++. .....+. ..+..+.+++.+||+.||.+||++.+.|.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 1111111100 000 00000 0000111 123467888999999999999999976654
Q ss_pred HH
Q 003481 734 EL 735 (816)
Q Consensus 734 ~L 735 (816)
.+
T Consensus 455 p~ 456 (501)
T PHA03210 455 PL 456 (501)
T ss_pred hh
Confidence 43
No 332
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.3e-33 Score=307.08 Aligned_cols=258 Identities=24% Similarity=0.316 Sum_probs=195.3
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccC--CcccHHHHHHHHHHHhcC-CCCceeeEeccccC----Cc
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH--NMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE----AW 538 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~--~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~----~~ 538 (816)
..++|...+.||.|+||.||+|.+. +..||+|++... .......+..|+.++.++ +||||++++++|.. ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888899999999999999875 788999988543 223344677899999999 99999999998732 36
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++||||++ ++|..++... .++|..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 89999997 5898887543 5789999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---Hhhc-Cc----
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSC-GK---- 689 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~~~-~~---- 689 (816)
........ .........||+.|+|||++.+ ..++.++||||||+++|+|+||+.||........ .... +.
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 157 LSELEENP-ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred cccccccc-cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 65433110 0012234568999999998754 5678999999999999999999999964332111 0000 00
Q ss_pred ---------cccccC----C---CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 690 ---------LSSILD----P---LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 690 ---------~~~~~d----~---~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
...+++ . .........+..+.+++.+||+.+|.+||++.+++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~ 296 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP 296 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhCh
Confidence 000000 0 00111112467899999999999999999999777653
No 333
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.6e-33 Score=308.84 Aligned_cols=259 Identities=23% Similarity=0.264 Sum_probs=198.4
Q ss_pred ccCHHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccc
Q 003481 459 EFSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGAC 534 (816)
Q Consensus 459 ~~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~ 534 (816)
.....++..++++|...+.||+|+||.||+|.+. +..||+|++.... ......+.+|+.++.+++||||+++++++
T Consensus 6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 3456778889999999999999999999999864 8899999986532 22345678899999999999999999887
Q ss_pred cC--------CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC
Q 003481 535 PE--------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL 606 (816)
Q Consensus 535 ~~--------~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~ 606 (816)
.. ..+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++
T Consensus 86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 86 TPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCC
Confidence 32 256777776 7899887753 24889999999999999999999988 99999999999999999
Q ss_pred CeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH--
Q 003481 607 SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR-- 683 (816)
Q Consensus 607 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~-- 683 (816)
.+||+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........
T Consensus 158 ~~kl~dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~ 228 (345)
T cd07877 158 ELKILDFGLARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 228 (345)
T ss_pred CEEEeccccccccccc---------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999998764322 234468899999998765 5688999999999999999999999964332111
Q ss_pred Hhhc--Cc--------------------cccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 684 AVSC--GK--------------------LSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 684 ~~~~--~~--------------------~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.+.. +. +.........+.....+..+.+|+.+||+.||.+||++.+.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 229 LILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred HHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 0000 00 000000000001112356789999999999999999998666554
No 334
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.7e-33 Score=295.92 Aligned_cols=247 Identities=21% Similarity=0.294 Sum_probs=189.7
Q ss_pred CHHHHHHHhcCCCcccee--eeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccc-
Q 003481 461 SLADLQTATCNFSESFKV--GQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGAC- 534 (816)
Q Consensus 461 ~~~el~~~t~~f~~~~~L--G~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~- 534 (816)
++.++....++|.+.+.+ |.|+||.||++... +..+|+|.+........ |+.+...+ +||||++++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 5 SLSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe
Confidence 345556666778777776 99999999999875 78899999865432221 22222222 799999999988
Q ss_pred -cCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC-CeeEee
Q 003481 535 -PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICD 612 (816)
Q Consensus 535 -~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-~vkL~D 612 (816)
.+..++||||+++++|.+++.... .+++..++.++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEec
Confidence 345899999999999999986543 6899999999999999999999988 99999999999999998 999999
Q ss_pred cccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCcccc
Q 003481 613 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSS 692 (816)
Q Consensus 613 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~ 692 (816)
||++...... ....|+..|+|||++.+..++.++|||||||++|+|++|+.||......... ...+..
T Consensus 154 fg~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~--~~~~~~ 221 (267)
T PHA03390 154 YGLCKIIGTP----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD--LESLLK 221 (267)
T ss_pred CccceecCCC----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh--HHHHHH
Confidence 9998766432 2235889999999999889999999999999999999999999633211000 000000
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCC-hHHH
Q 003481 693 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI-TPSL 731 (816)
Q Consensus 693 ~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~-~e~l 731 (816)
.. ......+...+..+.+++.+||+.+|.+||+. .+.+
T Consensus 222 ~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 222 RQ-QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred hh-cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 01 11112233567789999999999999999964 5433
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.3e-33 Score=297.28 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=191.4
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEecccc----CCccceee
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWSLVYE 543 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~----~~~~lV~E 543 (816)
|.+.+.||.|+||.||+|... +..||+|++.... ......+.+|+.++.+++|||++++++++. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566788999999999999886 6899999998663 233456889999999999999999999984 34889999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+++ +|.+++.... ..+++..++.++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9974 8888886543 36899999999999999999999987 9999999999999999999999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hhc-C-----ccccc
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-G-----KLSSI 693 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~~-~-----~~~~~ 693 (816)
.. ......++..|+|||.+.+ ..++.++||||||+++|+|+||+.||......... ... + .+...
T Consensus 155 ~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 155 SA-----DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred cc-----cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 10 1233457889999997754 46799999999999999999999999644322111 000 0 00000
Q ss_pred --------cCCCC-------CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 694 --------LDPLA-------GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 694 --------~d~~~-------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
..+.. ..+...++..+.+++.+||..+|.+||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 282 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQAL 282 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 00000 000111267889999999999999999998544
No 336
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=6.9e-33 Score=296.55 Aligned_cols=249 Identities=24% Similarity=0.300 Sum_probs=195.1
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeecc
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
|...+.||.|++|.||+|... +..+++|.+...... ....+.+|+.++++++||||+++++++. +..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 556778999999999999875 888999998765433 3456889999999999999999999884 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
++ +|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~- 153 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR- 153 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-
Confidence 75 8888876643 46899999999999999999999988 99999999999999999999999999987754331
Q ss_pred CCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc----Cc-----cccccC
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK-----LSSILD 695 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----~~-----~~~~~d 695 (816)
......++..|+|||.+.+. .++.++||||||+++|+|+||+.||...+........ +. +....+
T Consensus 154 -----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 154 -----PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred -----cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchh
Confidence 12334588899999988776 7899999999999999999999999654432211100 00 000000
Q ss_pred --------------CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 696 --------------PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 696 --------------~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
..........+..+.++|.+||+.||.+||++.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0001112345678999999999999999999996553
No 337
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.3e-33 Score=293.93 Aligned_cols=245 Identities=26% Similarity=0.382 Sum_probs=201.2
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
+|...+.||.|+||.||++.+. +..|++|++..... .....+.+|+++++.++|||++++++.+. +..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5778889999999999999986 88999999876544 44567889999999999999999998874 457899999
Q ss_pred cCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 545 LPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 545 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
+++++|.+++.... ....+++..+..|+.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999987642 1356899999999999999999999987 9999999999999999999999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~~~ 701 (816)
. ......|++.|+|||.+....++.++||||||+++|+|++|..||..... .......+. ....
T Consensus 158 ~------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~ 223 (258)
T cd08215 158 D------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ--------YPPI 223 (258)
T ss_pred c------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC--------CCCC
Confidence 1 12344688999999999888899999999999999999999999965432 111111111 1122
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
+...+..+.+++.+||..+|.+||++.+.+.
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3345568999999999999999999996553
No 338
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4e-33 Score=297.74 Aligned_cols=245 Identities=29% Similarity=0.372 Sum_probs=198.6
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCC-CCceeeEeccccC--Cccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~--~~~lV 541 (816)
++|.....||.|+||.||+|... +..||+|++..... .....+..|+.++.+++ ||||+++++++.+ ..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888899999999999999884 88999999876432 23456889999999998 9999999999844 58899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+++++|.+++.... .+++..++.|+.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999997653 6999999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCcCC--------------CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc
Q 003481 622 DTLYLP--------------SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC 687 (816)
Q Consensus 622 ~~~~~~--------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~ 687 (816)
...... .........++..|+|||.+....++.++||||||+++|+|++|+.||............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 234 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI 234 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 331100 011223456789999999998888999999999999999999999999765432211110
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 688 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
. .....++...+..+.+|+.+||+.+|.+||++
T Consensus 235 ~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 235 L-------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred H-------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 0 11122344456789999999999999999999
No 339
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.6e-33 Score=308.98 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=195.6
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------C
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------A 537 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------~ 537 (816)
.++|.....||.|+||.||+|... +..||||.+.... ......+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457899999999999999999875 8899999986532 2234467789999999999999999998732 3
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 689999995 6888887643 35899999999999999999999987 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH------------
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA------------ 684 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~------------ 684 (816)
....... ......++..|+|||.+.. ..++.++|||||||++|+|++|++||...+.....
T Consensus 157 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 230 (337)
T cd07858 157 TTSEKGD------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSE 230 (337)
T ss_pred ccCCCcc------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 7644321 1234467889999998764 46899999999999999999999999643221100
Q ss_pred -----hhcCcccccc-------CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 685 -----VSCGKLSSIL-------DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 685 -----~~~~~~~~~~-------d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+..+.....+ ++.........+..+.+|+.+||+.+|.+||++.+.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~ 293 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence 0000000000 00001111235678899999999999999999997665543
No 340
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=7.9e-33 Score=291.41 Aligned_cols=242 Identities=27% Similarity=0.400 Sum_probs=199.3
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
+|.+.+.||.|+||.||++... +..+++|.+..... .....+.+|+.+++.++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778889999999999999875 78899999876432 234467889999999999999999988743 58899999
Q ss_pred cCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 545 LPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 545 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
+++++|.+++.... ....+++..++.++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 99999999886632 2246899999999999999999999988 9999999999999999999999999998765431
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~ 701 (816)
.....+++.|++||.+.+..++.++|+||||+++|+|++|+.||...+.. ...+..+.. ...
T Consensus 158 --------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~ 221 (256)
T cd08530 158 --------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY--------PPI 221 (256)
T ss_pred --------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------CCC
Confidence 12345889999999999889999999999999999999999999754432 222222222 223
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+...+..+.+++.+||..+|.+||++.+.+
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 251 (256)
T cd08530 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKIL 251 (256)
T ss_pred chhhCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 345667899999999999999999998654
No 341
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=9.1e-33 Score=299.86 Aligned_cols=254 Identities=25% Similarity=0.357 Sum_probs=189.6
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC---------
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--------- 536 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~~--------- 536 (816)
++|.....||+|+||.||+|... +..||||.+...... ....+.+|+.++++++||||++++++|..
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 47889999999999999999885 789999988654322 23356789999999999999999998732
Q ss_pred -CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccc
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 615 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGl 615 (816)
..++||||+. ++|.+.+.... ..+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence 2489999996 47888775543 35899999999999999999999987 99999999999999999999999999
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH--Hhh--cCcc
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVS--CGKL 690 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~--~~~--~~~~ 690 (816)
+.......... ........++..|+|||++.+. .++.++||||||+++|+|+||.+||........ .+. .+.+
T Consensus 166 ~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 166 ARAFSLSKNSK--PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred cccccCCcccC--CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 98764332110 0112344678899999987654 478899999999999999999999964432111 000 0111
Q ss_pred ccccCCC------------CCC---------CCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 691 SSILDPL------------AGD---------WPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 691 ~~~~d~~------------~~~---------~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
..-+-+. ... .+......+.+||.+||..||.+||++.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 0000000 000 0011235678999999999999999998554
No 342
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-32 Score=344.95 Aligned_cols=255 Identities=30% Similarity=0.462 Sum_probs=199.7
Q ss_pred cCHHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC-
Q 003481 460 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE- 536 (816)
Q Consensus 460 ~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~- 536 (816)
+++.++ ...|.....||+|+||.||+|.+. +..||||.+...... ...|+.++++++|||||+++|+|.+
T Consensus 683 ~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 683 ITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred hhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcC
Confidence 444444 345778889999999999999874 889999998643322 2346889999999999999999943
Q ss_pred -CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccc
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 615 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGl 615 (816)
..++||||+++|+|.+++. .++|..+.+|+.|++.||.|||..+.++|+||||||+||+++.++.+++. ||.
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~ 828 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSL 828 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecc
Confidence 5789999999999999994 38999999999999999999997654669999999999999999888876 665
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCCh--------HHHHHHhhc
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA--------GEVRRAVSC 687 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~--------~~~~~~~~~ 687 (816)
...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||... .+.......
T Consensus 829 ~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 898 (968)
T PLN00113 829 PGLLCT----------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD 898 (968)
T ss_pred cccccc----------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc
Confidence 543321 12336889999999999999999999999999999999999998421 122222222
Q ss_pred CccccccCCCCC---CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 688 GKLSSILDPLAG---DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 688 ~~~~~~~d~~~~---~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
......+|+... ..+......+.+++.+||+.+|.+||++. ++++.|+.+.
T Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~-evl~~L~~~~ 952 (968)
T PLN00113 899 CHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAN-DVLKTLESAS 952 (968)
T ss_pred cchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHH-HHHHHHHHhh
Confidence 333344454431 23445666889999999999999999999 6777787664
No 343
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=7e-33 Score=299.92 Aligned_cols=254 Identities=24% Similarity=0.328 Sum_probs=193.8
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC------
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE------ 536 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------ 536 (816)
...++|.+...||.|+||.||+|.+. |..||+|++..... .....+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999985 78999999875432 233467789999999999999999998743
Q ss_pred ------CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeE
Q 003481 537 ------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 610 (816)
Q Consensus 537 ------~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL 610 (816)
..++|+||+++ +|.+.+... ...+++..+..|+.||+.||.|||+.+ |+|+||||+||+++.++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence 46899999976 676766543 246899999999999999999999988 999999999999999999999
Q ss_pred eecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hh-
Q 003481 611 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VS- 686 (816)
Q Consensus 611 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~- 686 (816)
+|||++......... ......++..|+|||++.+ ..++.++|||||||++|+|++|++||......... +.
T Consensus 158 ~dfg~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 158 ADFGLARLYNSEESR-----PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232 (302)
T ss_pred CcccccccccCCccc-----ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999999876543310 1123356788999998754 45789999999999999999999999754432211 00
Q ss_pred --cCcc----ccc--------cCCCC------CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 687 --CGKL----SSI--------LDPLA------GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 687 --~~~~----~~~--------~d~~~------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.+.. ..+ .++.. .......+..+.+++.+||+.+|.+||++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 297 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 0000 000 00000 000112457899999999999999999998544
No 344
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.3e-33 Score=307.99 Aligned_cols=253 Identities=22% Similarity=0.280 Sum_probs=194.8
Q ss_pred HHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC----
Q 003481 465 LQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE---- 536 (816)
Q Consensus 465 l~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~---- 536 (816)
+...+++|...+.||+|+||.||++... +..||||++..... .....+.+|+.+|.+++||||+++++++..
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3446788999999999999999999875 88999999864322 223467899999999999999999998742
Q ss_pred ----CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEee
Q 003481 537 ----AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICD 612 (816)
Q Consensus 537 ----~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~D 612 (816)
..++||+|+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEee
Confidence 247999999 7789888753 35899999999999999999999988 99999999999999999999999
Q ss_pred cccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHh---hc-
Q 003481 613 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV---SC- 687 (816)
Q Consensus 613 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~---~~- 687 (816)
||++...... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|..||.......... ..
T Consensus 162 fg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~ 232 (343)
T cd07880 162 FGLARQTDSE---------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVT 232 (343)
T ss_pred cccccccccC---------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 9998765432 133467899999998865 458899999999999999999999997543221110 00
Q ss_pred -------------CccccccCCC-------CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 688 -------------GKLSSILDPL-------AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 688 -------------~~~~~~~d~~-------~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.......... ........+..+.+++.+||+.||.+||++.+.+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~ 299 (343)
T cd07880 233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP 299 (343)
T ss_pred CCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0000000000 0011123455789999999999999999999655443
No 345
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=310.28 Aligned_cols=251 Identities=28% Similarity=0.417 Sum_probs=209.4
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecccc--CC
Q 003481 464 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACP--EA 537 (816)
Q Consensus 464 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~ 537 (816)
+...-.+.|.+..+||+|.|+.|.+++.. +..||||.+.+.... ....+.+|+++|..|+|||||+++.+.. ..
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 33455678999999999999999999885 899999999876543 2345889999999999999999999874 56
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
+|+||||+.+|.+.++|.+.+. +.......++.|+.+|++|||+.+ |||||||++||||+.+.++||+|||++.
T Consensus 130 lylV~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~ 203 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFST 203 (596)
T ss_pred eEEEEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccce
Confidence 9999999999999999988764 445788899999999999999988 9999999999999999999999999999
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCC-CcchhHhHHHHHHHHHHhCCCCCCChH--HHHHHhhcCcccccc
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL-TPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSIL 694 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDVwSlGviL~elltG~~Pf~~~~--~~~~~~~~~~~~~~~ 694 (816)
.+..+. .....+|++.|.|||++.+..| ++.+|+||+|++||-|+.|..||.+.. ........|++
T Consensus 204 ~~~~~~-------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~---- 272 (596)
T KOG0586|consen 204 FFDYGL-------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY---- 272 (596)
T ss_pred eecccc-------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee----
Confidence 887544 3466789999999999998876 589999999999999999999997332 22222222222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
..|-.++.++.+|+.++|-++|.+|+++.+...+..-
T Consensus 273 -----rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 273 -----RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred -----cccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 2345567789999999999999999999976665543
No 346
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=5.4e-33 Score=307.07 Aligned_cols=247 Identities=26% Similarity=0.319 Sum_probs=188.8
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 536 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------- 536 (816)
.++|.....||+|+||.||+|.+. |..||||++..... .....+.+|+.++.+++||||++++++|..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999874 88999999865322 223457899999999999999999998742
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
..++|+||+.. +|..++. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 25899999964 6766541 25889999999999999999999988 999999999999999999999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hhc-----
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC----- 687 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~~----- 687 (816)
+..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+..... +..
T Consensus 165 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 165 RHADAE---------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred cCCCCC---------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 764321 133467889999998866 46889999999999999999999999754321111 100
Q ss_pred ---------CccccccC--CC--CCCC---CHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 688 ---------GKLSSILD--PL--AGDW---PTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 688 ---------~~~~~~~d--~~--~~~~---~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
........ +. ...+ ....+..+.+|+.+||+.||.+||++.+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 00 0000 11244578999999999999999999966544
No 347
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6.9e-33 Score=296.95 Aligned_cols=248 Identities=25% Similarity=0.335 Sum_probs=190.4
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEecccc--CCccceeecc
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVYEYL 545 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~-HpnIv~l~g~~~--~~~~lV~E~~ 545 (816)
|.+.+.||.|+||.||+|... +..|+||.+..... .......+|+..+.+++ ||||+++++++. +..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567788999999999999985 78899999865433 22334567999999998 999999999984 3588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
+|+|.+++.... ...+++..++.++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 889998886654 246899999999999999999999987 99999999999999999999999999987644321
Q ss_pred CCCccccCCCCCCCCCCCccccc-cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc-----------------
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----------------- 687 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~----------------- 687 (816)
.....++..|+|||++. ...++.++||||||+++|+|++|++||............
T Consensus 155 ------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 155 ------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred ------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence 13345888999999874 456799999999999999999999999644322111100
Q ss_pred --CccccccCCC----CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 688 --GKLSSILDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 688 --~~~~~~~d~~----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
..+...+... ........+..+.+++.+||+.+|.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~ 278 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQAL 278 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHh
Confidence 0000000000 0011111246799999999999999999998554
No 348
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.5e-33 Score=292.26 Aligned_cols=242 Identities=28% Similarity=0.341 Sum_probs=192.3
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCch
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 550 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL 550 (816)
||.|+||.||++.+. |..|++|++..... .....+.+|+.++.+++||||+++++.+.. ..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 88999999876544 344568899999999999999999988743 47899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC--CC
Q 003481 551 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL--PS 628 (816)
Q Consensus 551 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~--~~ 628 (816)
.+++.... .+++..+..|+.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......... ..
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99987654 5899999999999999999999987 9999999999999999999999999987654321100 00
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHH--
Q 003481 629 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTF-- 704 (816)
Q Consensus 629 ~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~-- 704 (816)
........++..|++||.+....++.++||||||+++|+|++|..||...... ...+..+.. .++..
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~ 225 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI---------EWPEDVE 225 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc---------CCCcccc
Confidence 01223456788999999998888999999999999999999999999644322 111222111 12222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 705 VARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+..+.+++.+||+.+|.+||++. .+.+.|
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~-~~~~~l 255 (265)
T cd05579 226 VSDEAIDLISKLLVPDPEKRLGAK-SIEEIK 255 (265)
T ss_pred CCHHHHHHHHHHhcCCHhhcCCCc-cHHHHh
Confidence 267899999999999999999995 343444
No 349
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.7e-32 Score=294.13 Aligned_cols=249 Identities=28% Similarity=0.382 Sum_probs=190.5
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcC---CCCceeeEecccc--CC-----
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKL---QHPHLVTLLGACP--EA----- 537 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l---~HpnIv~l~g~~~--~~----- 537 (816)
|.+.+.||.|+||.||+|++. +..||+|++...... ....+.+|+.++.++ +||||++++++|. +.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999985 789999999754322 223566788777666 6999999999983 23
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.+++|||+.+ +|.+++..... ..+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence 7899999974 78888865432 35899999999999999999999987 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---HhhcCcc----
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSCGKL---- 690 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~~~~~~---- 690 (816)
....... .....+++.|+|||++.+..++.++|||||||++|+|++|.+||........ ....-..
T Consensus 156 ~~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 156 IYSFEMA-------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEE 228 (287)
T ss_pred eccCCcc-------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChH
Confidence 7654321 1233578899999999988999999999999999999999999964432211 1110000
Q ss_pred --c-------cccCCC----CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 691 --S-------SILDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 691 --~-------~~~d~~----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
. ...... ........+..+.+++.+||+.||.+||++.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 000000 01111245678899999999999999999996553
No 350
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=9e-33 Score=300.05 Aligned_cols=257 Identities=25% Similarity=0.356 Sum_probs=191.2
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 536 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~--~~~~~~E~~il~~l~HpnIv~l~g~~~~-------- 536 (816)
.++|...+.||.|+||.||+|.+. +..||||++....... ...+.+|+.++.+++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999885 7889999986543322 2457789999999999999999987622
Q ss_pred --CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 537 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 537 --~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
..++|++|+.+ +|...+.... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence 25899999965 6766665432 36899999999999999999999988 9999999999999999999999999
Q ss_pred cceeccCCCCcCC-----CccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---Hh
Q 003481 615 ICRLVTEDTLYLP-----SFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AV 685 (816)
Q Consensus 615 la~~~~~~~~~~~-----~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~---~~ 685 (816)
++........... .....+...+++.|+|||++.+ ..++.++|||||||++|+|++|++||........ .+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9986643321110 1112234567889999998765 4588999999999999999999999964332211 00
Q ss_pred h-cCc-----------cccccC-CCCCCCC-------HHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 686 S-CGK-----------LSSILD-PLAGDWP-------TFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 686 ~-~~~-----------~~~~~d-~~~~~~~-------~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
. .+. +....+ ......+ ......+.+++.+||+.||.+||++.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 0 000 000000 0000111 11235788999999999999999998544
No 351
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.5e-33 Score=298.70 Aligned_cols=241 Identities=27% Similarity=0.357 Sum_probs=189.9
Q ss_pred CCCccceeeeecceEEEEEEE-----cCeEEEEEEeccCCc----ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cc
Q 003481 471 NFSESFKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM----QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AW 538 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~-----~g~~vAiK~l~~~~~----~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~ 538 (816)
+|+..+.||.|+||.||++.. .|..||+|++..... .....+.+|+.++.++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477888999999999999986 478899999875432 2345678999999999 69999999988854 46
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++||||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 89999999999999987643 5788999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccC--CCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCcccccc
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG--VLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSIL 694 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~ 694 (816)
....... ......|+..|+|||++... .++.++||||||+++|+|++|..||...... ...+.. .+
T Consensus 155 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~-----~~ 224 (290)
T cd05613 155 FHEDEVE-----RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR-----RI 224 (290)
T ss_pred ccccccc-----ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH-----Hh
Confidence 6443211 12345689999999988653 4788999999999999999999999632210 011100 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
......++...+..+.+++.+||+.+|.+||+.
T Consensus 225 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~ 257 (290)
T cd05613 225 LKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGC 257 (290)
T ss_pred hccCCCCCccCCHHHHHHHHHHhcCCHHHhcCC
Confidence 011122344566789999999999999999854
No 352
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2e-32 Score=289.75 Aligned_cols=232 Identities=25% Similarity=0.283 Sum_probs=183.3
Q ss_pred ceeeeecceEEEEEEEc--CeEEEEEEeccCCccc---HHHHHHHHHHH-hcCCCCceeeEeccccC--CccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVL-SKLQHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~---~~~~~~E~~il-~~l~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
+.||.|+||.||+|... ++.||+|++....... ...+..|..++ ...+||||+++++++.+ ..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999884 7899999987543322 22344555544 45589999999999854 58999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
++|.+++.... .+++..+..|+.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.....
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 99999986543 5888999999999999999999987 99999999999999999999999999876432
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.....|++.|++||.+.+..++.++||||||+++|+|++|..||...... ...+..+.... .......+
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 220 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINW-----PEEVKEFC 220 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCC-----CCcccccC
Confidence 12345889999999998888999999999999999999999999644321 12222221110 01112235
Q ss_pred HHHHHHHHHHhhccCCCCCCCCh
Q 003481 706 ARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
+..+.+++.+||+.+|.+||++.
T Consensus 221 ~~~~~~~i~~~l~~~p~~R~~~~ 243 (260)
T cd05611 221 SPEAVDLINRLLCMDPAKRLGAN 243 (260)
T ss_pred CHHHHHHHHHHccCCHHHccCCC
Confidence 67899999999999999999875
No 353
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=283.94 Aligned_cols=246 Identities=24% Similarity=0.348 Sum_probs=198.6
Q ss_pred HHhcCCCcc-ceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccCC-----
Q 003481 467 TATCNFSES-FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPEA----- 537 (816)
Q Consensus 467 ~~t~~f~~~-~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~~----- 537 (816)
..|++|.+. .+||-|-.|.|-.+... +..+|+|++... ....+|+++--.. .|||||.++++|.+.
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 356777664 47999999999998775 889999998543 2345777765544 699999999998542
Q ss_pred -ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC---CCCeeEeec
Q 003481 538 -WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDF 613 (816)
Q Consensus 538 -~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~---~~~vkL~DF 613 (816)
+.+|||+|+||.|...+..++. ..+++.++..|+.||+.|+.|||+.+ |.||||||+|+|... |..+||+||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccc
Confidence 5689999999999999987764 56999999999999999999999998 999999999999964 557999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCCh------HHHHHHhhc
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA------GEVRRAVSC 687 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~------~~~~~~~~~ 687 (816)
|+|+...... .....+-||.|.|||++...+|+..+|+||+||++|-|++|.+||... ......+..
T Consensus 209 GFAK~t~~~~-------~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~ 281 (400)
T KOG0604|consen 209 GFAKETQEPG-------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT 281 (400)
T ss_pred ccccccCCCc-------cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence 9999765332 235677899999999999999999999999999999999999999533 234444444
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 688 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 688 ~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
|.+.- ...+| ..+++...++|..+|..+|.+|.|+.+.+.+
T Consensus 282 gqy~F----P~pEW-s~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 282 GQYEF----PEPEW-SCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred cCccC----CChhH-hHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 44321 11223 3578899999999999999999999865443
No 354
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.1e-32 Score=295.55 Aligned_cols=230 Identities=26% Similarity=0.344 Sum_probs=178.5
Q ss_pred eeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHH---HHhcCCCCceeeEecccc--CCccceeeccC
Q 003481 477 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVR---VLSKLQHPHLVTLLGACP--EAWSLVYEYLP 546 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~---il~~l~HpnIv~l~g~~~--~~~~lV~E~~~ 546 (816)
.||+|+||.||++... ++.||+|.+...... ....+..|.. .+....||||+++++++. +..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3899999999999874 789999998764322 1222444443 344458999999999884 35789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+|+|.+++... ..+++..+..|+.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 99999988653 36899999999999999999999987 9999999999999999999999999987654321
Q ss_pred CCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHH-HHhhcCccccccCCCCCCCCHH
Q 003481 627 PSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR-RAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
.....|+..|+|||++.++ .++.++|||||||++|+|++|+.||....... ...... .......++..
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 221 (278)
T cd05606 152 -----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----TLTMAVELPDS 221 (278)
T ss_pred -----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH-----hhccCCCCCCc
Confidence 1234689999999998754 68999999999999999999999996442110 000000 00111223444
Q ss_pred HHHHHHHHHHHhhccCCCCCC
Q 003481 705 VARRLVDLGLQCCELYGRERP 725 (816)
Q Consensus 705 ~~~~l~~Li~~cl~~dP~~RP 725 (816)
.+..+.+++.+||..+|.+||
T Consensus 222 ~s~~~~~li~~~l~~~p~~R~ 242 (278)
T cd05606 222 FSPELRSLLEGLLQRDVNRRL 242 (278)
T ss_pred CCHHHHHHHHHHhhcCHHhcc
Confidence 567899999999999999999
No 355
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.7e-32 Score=299.62 Aligned_cols=255 Identities=18% Similarity=0.246 Sum_probs=189.1
Q ss_pred eeeee--cceEEEEEEE--cCeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCC
Q 003481 477 KVGQG--GFGCVYKGEM--LGRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNG 548 (816)
Q Consensus 477 ~LG~G--~~g~Vy~~~~--~g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~g 548 (816)
.||.| +||+||++.+ .|+.||+|++..... ...+.+.+|+.++..++||||++++++|. +..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 9999999988 489999999875432 23456889999999999999999999984 3578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC-
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP- 627 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~- 627 (816)
+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++++|||.+...........
T Consensus 85 ~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99998876532 35889999999999999999999987 99999999999999999999999986543322111000
Q ss_pred CccccCCCCCCCCCCCccccccC--CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhh--cCccc------------
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTG--VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLS------------ 691 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~--~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~--~~~~~------------ 691 (816)
.........++..|+|||++.+. .++.++|||||||++|+|++|+.||........... .+...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 00011122356779999998763 478999999999999999999999964432111110 00000
Q ss_pred -------------------------cccCC-CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 692 -------------------------SILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 692 -------------------------~~~d~-~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+.+. .....+..++..+.+|+.+||+.||.+|||+.+.+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 00000 001112346778999999999999999999997775554
No 356
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.2e-32 Score=289.48 Aligned_cols=246 Identities=24% Similarity=0.306 Sum_probs=192.7
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-----cccHHHHHHHHHHHhcCCCCceeeEecccc--CCccce
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-----MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLV 541 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-----~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV 541 (816)
+|.+.+.||+|+||.||++.+. +..+++|+++... ......+..|+.++..++||||+++++++. +..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778889999999999999886 4456666654322 123345778999999999999999999884 357899
Q ss_pred eeccCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 542 YEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
|||+++++|.+++... .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. +.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988653 22356899999999999999999999987 999999999999975 569999999988764
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCC
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~ 700 (816)
.... ......|++.|+|||++.+..++.++||||||+++|+|++|..||........... ........
T Consensus 157 ~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~ 224 (260)
T cd08222 157 GSCD------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR------IVEGPTPS 224 (260)
T ss_pred CCcc------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH------HHcCCCCC
Confidence 3321 12345688999999999888899999999999999999999999964333211111 01111222
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.+..++..+.+++.+||..+|.+||++.+.+.
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 225 LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 34556778999999999999999999986554
No 357
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.6e-32 Score=301.42 Aligned_cols=253 Identities=26% Similarity=0.306 Sum_probs=196.7
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------Ccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------AWS 539 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-------~~~ 539 (816)
+|.+.+.||.|+||.||+|+.. +..||||++.... ......+.+|+.+++.++||||+++++++.. ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999985 7899999987643 3344578899999999999999999998843 468
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
+||+|+. ++|.+++.... .+++..++.++.+|+.||.|||+.+ |+||||||+|||++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 58888885543 6899999999999999999999988 999999999999999999999999999887
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH---hhc-C------
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-G------ 688 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~---~~~-~------ 688 (816)
...... ........+++.|+|||++.+. .++.++||||||+++|+|++|.+||......... ... +
T Consensus 154 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 154 DPDEDE---KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred cccccc---cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 554310 0112344688999999999887 8899999999999999999999999654432110 000 0
Q ss_pred -------ccccccC---CC----CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 689 -------KLSSILD---PL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 689 -------~~~~~~d---~~----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
.....+. .. ........+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000000 00 000112245688999999999999999999966644
No 358
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.2e-32 Score=297.07 Aligned_cols=239 Identities=26% Similarity=0.344 Sum_probs=188.9
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeec
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 544 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~ 544 (816)
|.....||+|+||.||+|+.. +..|++|.+...... ....+.+|+.+++.++|||++++++++.+ ..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999874 889999998654332 23467889999999999999999999854 47899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
+. |+|.+++.... .++++..++.++.||+.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 95 57777775543 46899999999999999999999987 99999999999999999999999998864321
Q ss_pred cCCCccccCCCCCCCCCCCccccc---cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHh--hcCccccccCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--SCGKLSSILDPLAG 699 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~--~~~~~~~~~d~~~~ 699 (816)
.....|+..|+|||++. .+.++.++|||||||++|+|++|..||.......... ........
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 240 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL------ 240 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC------
Confidence 23456889999999874 4668899999999999999999999986543322111 11111110
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
.....+..+.+|+.+||+.+|.+||++.+.+.+
T Consensus 241 -~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 241 -QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 112234578999999999999999999965544
No 359
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.7e-32 Score=299.76 Aligned_cols=252 Identities=25% Similarity=0.326 Sum_probs=193.8
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc---C
Q 003481 464 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP---E 536 (816)
Q Consensus 464 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~---~ 536 (816)
++..++++|...+.||.|+||.||++... +..||+|++..... .....+.+|+.++..++||||++++++|. +
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 44567889999999999999999999875 78999998864322 23456789999999999999999999873 3
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
..++|+||+ +++|..++.. .++++..+..++.|++.||.|||+.+ |+||||+|+|||++.++.++|+|||++
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccc
Confidence 478999998 5688887753 24788889999999999999999988 999999999999999999999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH------------
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR------------ 683 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~------------ 683 (816)
...... .....++..|+|||++.+ ..++.++|||||||++|+|+||++||........
T Consensus 156 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~ 226 (328)
T cd07856 156 RIQDPQ---------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPP 226 (328)
T ss_pred cccCCC---------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 754321 123457889999998765 5689999999999999999999999964332110
Q ss_pred -----HhhcCccccccCCC--CCCCC-----HHHHHHHHHHHHHhhccCCCCCCCChHHHH
Q 003481 684 -----AVSCGKLSSILDPL--AGDWP-----TFVARRLVDLGLQCCELYGRERPDITPSLV 732 (816)
Q Consensus 684 -----~~~~~~~~~~~d~~--~~~~~-----~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~ 732 (816)
.+..+.....+... ....+ ...+..+.++|.+||+.+|.+||++.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 227 DDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000000000 00111 124568999999999999999999986543
No 360
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.4e-32 Score=297.30 Aligned_cols=241 Identities=26% Similarity=0.348 Sum_probs=190.2
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccceee
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E 543 (816)
.|...+.||.|+||.||+|+.. +..||+|.+..... .....+.+|+.+++.++|||++++++++. +..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666788999999999999885 78899999864322 23346788999999999999999999874 35789999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
|+. |+|.+.+.... .++++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.++|+|||++......
T Consensus 96 ~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 96 YCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred ccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 996 57877775443 35889999999999999999999987 999999999999999999999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccc---cCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLA 698 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~ 698 (816)
....|++.|+|||++. .+.++.++|||||||++|+|++|..||....... ..+..+....
T Consensus 169 ---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------ 233 (308)
T cd06634 169 ---------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA------ 233 (308)
T ss_pred ---------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCC------
Confidence 2345888999999874 3568899999999999999999999986443221 1122111111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
..+...+..+.+||.+||..+|.+||++.+.+.+.
T Consensus 234 -~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 234 -LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred -cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 11223556789999999999999999998655443
No 361
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-32 Score=305.52 Aligned_cols=248 Identities=29% Similarity=0.448 Sum_probs=208.1
Q ss_pred CccceeeeecceEEEEEEEc------CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC-Cccceeec
Q 003481 473 SESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEY 544 (816)
Q Consensus 473 ~~~~~LG~G~~g~Vy~~~~~------g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~lV~E~ 544 (816)
...++||+|+||+||+|.+- .-+||||++.... .+...+|..|+-+|.+|+|||+++|+|+|.. ...||++|
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~ 778 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL 778 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence 34578999999999999884 3579999986654 3456689999999999999999999999954 58899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
|+.|+|.+++..+. ..+-.+..+.|..|||+|+.|||... ++||||-..|||+..-..+||.|||+++....+..
T Consensus 779 mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred cccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 99999999998765 46777999999999999999999977 99999999999999999999999999999877653
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCC--hHHHHHHhhcCccccccCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGL--AGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~--~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
. +......-.+-|||=|.+....|+.++|||||||++|||+| |..|+.. ..++...+..|.. -..
T Consensus 854 e----y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR--------Lsq 921 (1177)
T KOG1025|consen 854 E----YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER--------LSQ 921 (1177)
T ss_pred c----ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc--------CCC
Confidence 2 22334445667999999999999999999999999999999 9999863 4456666665543 134
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
|+..+.++..++.+||..|+..||+++ ++...+..+
T Consensus 922 PpiCtiDVy~~mvkCwmid~~~rp~fk-el~~~fs~~ 957 (1177)
T KOG1025|consen 922 PPICTIDVYMVMVKCWMIDADSRPTFK-ELAEEFSRM 957 (1177)
T ss_pred CCCccHHHHHHHHHHhccCcccCccHH-HHHHHHHHH
Confidence 566778999999999999999999999 666666554
No 362
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=284.54 Aligned_cols=252 Identities=26% Similarity=0.349 Sum_probs=197.6
Q ss_pred cccCHHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEecc
Q 003481 458 AEFSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGA 533 (816)
Q Consensus 458 ~~~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l-~HpnIv~l~g~ 533 (816)
-.|+-++|+.. ..||.|.||+|++-.+. |+..|||+++.... ..+.+|..|.+...+- +.||||++||+
T Consensus 59 ~~F~~~~Lqdl-------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa 131 (361)
T KOG1006|consen 59 HTFTSDNLQDL-------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGA 131 (361)
T ss_pred cccccchHHHH-------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence 44666666655 45999999999999886 89999999987765 5667888998876665 79999999998
Q ss_pred c--cCCccceeeccCCCchhhhhh---hcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 534 C--PEAWSLVYEYLPNGSLQDRLF---RKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 534 ~--~~~~~lV~E~~~~gsL~~~l~---~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
+ ++..++.||+|+ .||..+-. ... ...+++.-+-.|......||.||...- .||||||||+||||+..|.+
T Consensus 132 ~F~EGdcWiCMELMd-~SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~v 207 (361)
T KOG1006|consen 132 LFSEGDCWICMELMD-ISLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDV 207 (361)
T ss_pred hhcCCceeeeHHHHh-hhHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCE
Confidence 7 445889999994 46654332 222 245888888889999999999998864 49999999999999999999
Q ss_pred eEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHh-
Q 003481 609 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV- 685 (816)
Q Consensus 609 kL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~- 685 (816)
||||||++-.+.... ..+..+|-..|||||.+.. ..|+.+|||||||++|||+.||..|+...+.+...+
T Consensus 208 KLCDFGIcGqLv~Si-------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~ 280 (361)
T KOG1006|consen 208 KLCDFGICGQLVDSI-------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLC 280 (361)
T ss_pred eeecccchHhHHHHH-------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHH
Confidence 999999998775433 2355678899999998753 358999999999999999999999998777665543
Q ss_pred --hcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHH
Q 003481 686 --SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPS 730 (816)
Q Consensus 686 --~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~ 730 (816)
..|....++.+. -...++..+..+|..||.+|-.+||...+.
T Consensus 281 ~Vv~gdpp~l~~~~---~~~~~s~~~~~fintCl~Kd~~~Rpky~~L 324 (361)
T KOG1006|consen 281 QVVIGDPPILLFDK---ECVHYSFSMVRFINTCLIKDRSDRPKYDDL 324 (361)
T ss_pred HHHcCCCCeecCcc---cccccCHHHHHHHHHHhhcccccCcchhhh
Confidence 334333322111 112367789999999999999999999843
No 363
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.8e-32 Score=291.71 Aligned_cols=248 Identities=26% Similarity=0.349 Sum_probs=193.0
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
|+....||+|+||.||+|+.. +..||+|++.... ......+.+|+.++++++||||+++++++.+ ..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556678999999999999886 7899999997654 2334567889999999999999999999854 588999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
. ++|.+++.... ..+++..++.++.+++.||.|||+.+ |+||||+|+||+++.++.+||+|||++........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 7 58999987653 35899999999999999999999988 99999999999999999999999999987654321
Q ss_pred CCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc---------------Cc
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC---------------GK 689 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~---------------~~ 689 (816)
......++..|+|||.+.+. .++.++|||||||++|+|++|.+||............ ..
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 -----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred -----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence 12233467889999988766 8899999999999999999999999654432111000 00
Q ss_pred c---ccccCCC----CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 690 L---SSILDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 690 ~---~~~~d~~----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+ ...+... ........+..+.+++.+||..+|.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 0 0000000 0000112356899999999999999999998554
No 364
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.1e-32 Score=296.53 Aligned_cols=250 Identities=26% Similarity=0.355 Sum_probs=194.2
Q ss_pred CCCccceeeeecceEEEEEEEc-----CeEEEEEEeccCCc----ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNM----QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AW 538 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~~----~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~ 538 (816)
+|...+.||+|+||.||+++.. +..||||++..... .....+.+|+.++.++ +||||+++++.+.. ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4777889999999999998753 57899999875422 2334688999999999 69999999988743 47
Q ss_pred cceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 539 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ ++||||+|.||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence 89999999999999886543 5889999999999999999999977 99999999999999999999999999877
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCC--CCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCcccccc
Q 003481 619 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV--LTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSIL 694 (816)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~ 694 (816)
....... ......|+..|+|||.+.+.. ++.++||||||+++|+|++|..||...+.. ...+......
T Consensus 155 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 226 (288)
T cd05583 155 FLAEEEE-----RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--- 226 (288)
T ss_pred ccccccc-----ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc---
Confidence 6443211 123346889999999987654 788999999999999999999999532211 0111111000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
.....+...+..+.+++.+||+.+|++|||+. .+...|+.
T Consensus 227 --~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~-~~~~~l~~ 266 (288)
T cd05583 227 --SKPPFPKTMSAEARDFIQKLLEKDPKKRLGAN-GADEIKNH 266 (288)
T ss_pred --cCCCCCcccCHHHHHHHHHHhcCCHhhccCcc-hHHHHhcC
Confidence 11123334556889999999999999999987 45555543
No 365
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-32 Score=304.50 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=192.2
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC----------
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE---------- 536 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~---------- 536 (816)
.++|...+.||.|+||.||+|... |..||+|.+..........+.+|+.++++++||||+++++++..
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999885 78999999877666666678899999999999999999987632
Q ss_pred ------CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEec-CCCCee
Q 003481 537 ------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD-SELSSK 609 (816)
Q Consensus 537 ------~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~-~~~~vk 609 (816)
..++||||+. ++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+||+++ .++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEE
Confidence 2579999996 588887743 25889999999999999999999988 99999999999997 456789
Q ss_pred EeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc-
Q 003481 610 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC- 687 (816)
Q Consensus 610 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~- 687 (816)
|+|||++.......... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||............
T Consensus 156 l~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 156 IGDFGLARIVDPHYSHK---GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred ECCcccceecCCccccc---cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999998764322110 11123457889999997644 56888999999999999999999999644322111100
Q ss_pred -C--------------cccccc--CCCCC-----CCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 688 -G--------------KLSSIL--DPLAG-----DWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 688 -~--------------~~~~~~--d~~~~-----~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
. .+...+ ..... ......+..+.+|+.+||+.||.+||++.+.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0 000000 00000 0111245678899999999999999999965543
No 366
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.5e-33 Score=323.43 Aligned_cols=256 Identities=29% Similarity=0.369 Sum_probs=191.6
Q ss_pred HHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC------
Q 003481 466 QTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE------ 536 (816)
Q Consensus 466 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------ 536 (816)
...-++|.....||+||||.||+++.. |..||||++..... .....+.+|+.+|++|+|||||++|..+.+
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 445677888899999999999999875 99999999976642 223457899999999999999998632100
Q ss_pred --------------------------------------------------------------------------------
Q 003481 537 -------------------------------------------------------------------------------- 536 (816)
Q Consensus 537 -------------------------------------------------------------------------------- 536 (816)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -----------------------------------CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 003481 537 -----------------------------------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 581 (816)
Q Consensus 537 -----------------------------------~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~y 581 (816)
.+||=||||+..+|.+++..+.... .-...++++.+|+.||.|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence 0245678887777777775543211 246789999999999999
Q ss_pred HhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc----C--------CCCcCCCccccCCCCCCCCCCCcccccc
Q 003481 582 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT----E--------DTLYLPSFHRSTAPKGSFPYADPEYHRT 649 (816)
Q Consensus 582 LH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~----~--------~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 649 (816)
+|+.+ ||||||||.||+||.+..|||+|||+|.... . ...........+..+||.-|+|||++.+
T Consensus 713 IH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 99988 9999999999999999999999999998721 0 0000111223467789999999999876
Q ss_pred C---CCCcchhHhHHHHHHHHHHhCCCCCCChHH---HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCC
Q 003481 650 G---VLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRE 723 (816)
Q Consensus 650 ~---~~s~ksDVwSlGviL~elltG~~Pf~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~ 723 (816)
. .|+.|+|+|||||||+||+ .||+..-+ +...+..|.+..- .++.......-..+|.++++.||.+
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~-----~~f~~~~~~~e~slI~~Ll~hdP~k 861 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEP-----ADFFDPEHPEEASLIRWLLSHDPSK 861 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCC-----cccccccchHHHHHHHHHhcCCCcc
Confidence 5 4999999999999999999 46764333 2333444444332 3344445556788999999999999
Q ss_pred CCCChHHHHHH
Q 003481 724 RPDITPSLVKE 734 (816)
Q Consensus 724 RPs~~e~l~~~ 734 (816)
|||+.+.|...
T Consensus 862 RPtA~eLL~s~ 872 (1351)
T KOG1035|consen 862 RPTATELLNSE 872 (1351)
T ss_pred CCCHHHHhhcc
Confidence 99999765443
No 367
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.7e-32 Score=300.38 Aligned_cols=258 Identities=23% Similarity=0.282 Sum_probs=190.8
Q ss_pred cCCCc-cceeeeecceEEEEEEEc--CeEEEEEEeccCCccc--------------HHHHHHHHHHHhcCCCCceeeEec
Q 003481 470 CNFSE-SFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--------------QLEFQQEVRVLSKLQHPHLVTLLG 532 (816)
Q Consensus 470 ~~f~~-~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~--------------~~~~~~E~~il~~l~HpnIv~l~g 532 (816)
++|.. .+.||.|+||.||+|.+. +..||||.+....... ...+.+|+.++..++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 467999999999999875 8899999986543221 124678999999999999999999
Q ss_pred ccc--CCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeE
Q 003481 533 ACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 610 (816)
Q Consensus 533 ~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL 610 (816)
++. +..++||||+. |+|.+++... ..+++.....++.|++.||.|||+.+ |+|+||+|+||+++.++.+||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEE
Confidence 974 45789999996 6898888643 35888999999999999999999987 999999999999999999999
Q ss_pred eecccceeccCCCCcC--------CCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHH
Q 003481 611 CDFGICRLVTEDTLYL--------PSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEV 681 (816)
Q Consensus 611 ~DFGla~~~~~~~~~~--------~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~ 681 (816)
+|||++.......... ..........+++.|+|||++.+. .++.++|||||||++|+|++|.+||...+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999998765211100 000112234578899999988654 4789999999999999999999999755432
Q ss_pred HHHh---h-cCc-----cccc--------cCCC----CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 682 RRAV---S-CGK-----LSSI--------LDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 682 ~~~~---~-~~~-----~~~~--------~d~~----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.... . .+. +... .... ........+..+.+++.+||+.+|.+||++.+.+.+.
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 2110 0 000 0000 0000 0000112356789999999999999999998666443
No 368
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-32 Score=292.69 Aligned_cols=247 Identities=27% Similarity=0.423 Sum_probs=191.7
Q ss_pred ccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcC--CCCceeeEecccc------CCccceeecc
Q 003481 474 ESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL--QHPHLVTLLGACP------EAWSLVYEYL 545 (816)
Q Consensus 474 ~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l--~HpnIv~l~g~~~------~~~~lV~E~~ 545 (816)
....||+|+||.||+|.+.++.||||++.. +....|++|-+|.+.. +|+||++++++-. -++.||++|.
T Consensus 214 l~eli~~Grfg~V~KaqL~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLDNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred hHHHhhcCccceeehhhccCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 345699999999999999999999999854 4456788888887754 8999999998852 1478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC------CceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP------EKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~------~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
+.|+|.++|..+ .++|....+|+..+++||+|||..-| ++|+|||||+.||||.+|++..|+|||+|..+
T Consensus 291 ~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~ 366 (534)
T KOG3653|consen 291 PKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRL 366 (534)
T ss_pred cCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEe
Confidence 999999999764 59999999999999999999998553 46999999999999999999999999999998
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccC-CCC-----cchhHhHHHHHHHHHHhCCCCC------------C-----
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLT-----PKSDSYSFGLIILQLLTGRLPV------------G----- 676 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s-----~ksDVwSlGviL~elltG~~Pf------------~----- 676 (816)
..+.... .....+||..|||||++.+. .+. .+.||||+|.|||||++.-.-+ .
T Consensus 367 ~p~~~~~----d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 367 EPGKPQG----DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred cCCCCCc----chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 7655322 23447899999999998653 122 3699999999999999964322 1
Q ss_pred --ChHHHHHHhhcCccccccCCCCCCCCH-----HHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 677 --LAGEVRRAVSCGKLSSILDPLAGDWPT-----FVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 677 --~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
..++++..+...+. .+.+|. .....|.+.+..||+.||+.|.|+. =+.+.+..+.
T Consensus 443 hPt~e~mq~~VV~kK~-------RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~-Cv~eR~~~l~ 504 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQ-------RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG-CVEERMAELM 504 (534)
T ss_pred CCCHHHHHHHHHhhcc-------CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH-HHHHHHHHHh
Confidence 11222222222221 122222 2455789999999999999999997 5555555443
No 369
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.3e-33 Score=299.34 Aligned_cols=234 Identities=23% Similarity=0.303 Sum_probs=201.8
Q ss_pred CccceeeeecceEEEEEEEcCeE--EEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccceeecc
Q 003481 473 SESFKVGQGGFGCVYKGEMLGRT--VAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 545 (816)
Q Consensus 473 ~~~~~LG~G~~g~Vy~~~~~g~~--vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~ 545 (816)
..+..||-||||.|=++...+.. +|+|++++...- .++.+..|-+||..++.|.||+||-.|.+ ..|++||-|
T Consensus 423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaC 502 (732)
T KOG0614|consen 423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEAC 502 (732)
T ss_pred hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhh
Confidence 34456999999999999887655 899999877553 34468899999999999999999999965 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 625 (816)
-||.|+..|..++. ++.....-++..+..|+.|||+.+ ||.|||||+|.+||.+|-+||.|||+|+.+..+.
T Consensus 503 lGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~-- 574 (732)
T KOG0614|consen 503 LGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR-- 574 (732)
T ss_pred cCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCC--
Confidence 99999999987763 666778889999999999999988 9999999999999999999999999999987655
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH--HHhhcCccccccCCCCCCCCH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPT 703 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~--~~~~~~~~~~~~d~~~~~~~~ 703 (816)
.+.+.+|||.|.|||++.+...+.++|.||||+++|||+||.+||...+.+. ..+..|- | ...||.
T Consensus 575 -----KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi-----d--~i~~Pr 642 (732)
T KOG0614|consen 575 -----KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI-----D--KIEFPR 642 (732)
T ss_pred -----ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh-----h--hhhccc
Confidence 4577899999999999999999999999999999999999999999877643 3333331 1 235778
Q ss_pred HHHHHHHHHHHHhhccCCCCCCC
Q 003481 704 FVARRLVDLGLQCCELYGRERPD 726 (816)
Q Consensus 704 ~~~~~l~~Li~~cl~~dP~~RPs 726 (816)
.+.....+||++.|..+|.+|-.
T Consensus 643 ~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 643 RITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ccchhHHHHHHHHHhcCcHhhhc
Confidence 88889999999999999999987
No 370
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.98 E-value=1.6e-32 Score=303.47 Aligned_cols=250 Identities=24% Similarity=0.304 Sum_probs=192.8
Q ss_pred HHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--C---
Q 003481 467 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--A--- 537 (816)
Q Consensus 467 ~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~--- 537 (816)
...++|.....||.|+||.||+|.+. +..||+|++.... ......+.+|+.++++++||||+++++++.. .
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 45678999999999999999999985 7889999986532 2233567789999999999999999987632 2
Q ss_pred ---ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecc
Q 003481 538 ---WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 614 (816)
Q Consensus 538 ---~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFG 614 (816)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccc
Confidence 78999998 6799988854 35899999999999999999999987 9999999999999999999999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--hhc--Cc
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSC--GK 689 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~~~--~~ 689 (816)
++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||......... +.. +.
T Consensus 164 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~ 234 (343)
T cd07851 164 LARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGT 234 (343)
T ss_pred cccccccc---------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Confidence 98865432 133467889999998765 36789999999999999999999999643322111 000 00
Q ss_pred c-------------ccccCCC----CCCC---CHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 690 L-------------SSILDPL----AGDW---PTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 690 ~-------------~~~~d~~----~~~~---~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
. ...+... ...+ ....+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0 0000000 0001 11236789999999999999999999965533
No 371
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-32 Score=286.47 Aligned_cols=237 Identities=28% Similarity=0.357 Sum_probs=197.8
Q ss_pred cCCCccceeeeecceEEEEEEEcC--eEEEEEEeccCCcc---cHHHHHHHHHHHhcC-CCCceeeEecccc--CCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQ---GQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~g--~~vAiK~l~~~~~~---~~~~~~~E~~il~~l-~HpnIv~l~g~~~--~~~~lV 541 (816)
.+|.....||+|+||.|.++...| ..+|||+++++... +.+--..|-++|... +-|.+++|+.+|. +.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 368888999999999999998875 56999999887542 222234677788776 6788999998884 679999
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
|||+.||+|.-++.+-+. +-+..+.-++.+||-||-|||+.+ ||.||||.+|||||.+|++||+|||+++.---
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999999987764 445778889999999999999988 99999999999999999999999999986543
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d~~~~ 699 (816)
+.. .+...+|||.|+|||++...+|+.++|+|||||+||||+.|++||...++ +...+...+ .
T Consensus 503 ~~~------TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn---------v 567 (683)
T KOG0696|consen 503 DGV------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN---------V 567 (683)
T ss_pred CCc------ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc---------C
Confidence 332 34677899999999999999999999999999999999999999986654 333333322 2
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
.+|...+.+...++...|...|.+|-..
T Consensus 568 syPKslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 568 SYPKSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred cCcccccHHHHHHHHHHhhcCCccccCC
Confidence 4788889999999999999999999654
No 372
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=4.9e-33 Score=297.27 Aligned_cols=240 Identities=29% Similarity=0.442 Sum_probs=201.3
Q ss_pred cceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceeeccCCC
Q 003481 475 SFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPNG 548 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~~~~g 548 (816)
.+.||+|.||+||-|++. |+.||||++.+-.. .....+.+|+.||.++.||.||.|-..| .+..++|||.+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 467999999999999875 99999999976543 3345789999999999999999998888 46789999999776
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC---CCeeEeecccceeccCCCCc
Q 003481 549 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLY 625 (816)
Q Consensus 549 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~---~~vkL~DFGla~~~~~~~~~ 625 (816)
-|+-+|.... ..|+......++.||+.||.|||..+ |+|+||||+||||... -.+||||||+|+.+....
T Consensus 649 MLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-- 721 (888)
T KOG4236|consen 649 MLEMILSSEK--GRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-- 721 (888)
T ss_pred HHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhh--
Confidence 6665555443 46888888889999999999999988 9999999999999654 469999999999998755
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHH
Q 003481 626 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 705 (816)
Q Consensus 626 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 705 (816)
.....+|||.|+|||++++..|...-|+||.|||+|--++|..||....++...+.+..+.-.. ..| .++
T Consensus 722 -----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp----~PW-~ei 791 (888)
T KOG4236|consen 722 -----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPP----NPW-SEI 791 (888)
T ss_pred -----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCC----Cch-hhc
Confidence 3567899999999999999999999999999999999999999998777777777665443221 122 356
Q ss_pred HHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 706 ARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 706 ~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
+...++||...|+..-.+|-+....+
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 77889999999999999999887544
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=7.2e-32 Score=296.76 Aligned_cols=255 Identities=22% Similarity=0.242 Sum_probs=189.8
Q ss_pred CCCccceeeeecceEEEEEEEc----CeEEEEEEeccCCc--ccHHHHHHHHHHHhcC-CCCceeeEecccc------CC
Q 003481 471 NFSESFKVGQGGFGCVYKGEML----GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKL-QHPHLVTLLGACP------EA 537 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~----g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l-~HpnIv~l~g~~~------~~ 537 (816)
+|...+.||+|+||.||++... +..||+|++..... .....+.+|+.++.++ +||||+++++++. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999885 55899999864322 2245678899999999 5999999998642 23
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.+++++|+. ++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678888885 6898888543 35889999999999999999999988 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH-------------
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR------------- 683 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~------------- 683 (816)
......... ........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||...+....
T Consensus 154 ~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 154 GFSENPGEN--AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ecccccccc--cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 765432211 111234578999999998765 4689999999999999999999999964331100
Q ss_pred ----HhhcCccccc---cC----CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 684 ----AVSCGKLSSI---LD----PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 684 ----~~~~~~~~~~---~d----~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.+........ .. ..........+..+.+|+.+||+.||.+||++.+.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~ 293 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP 293 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0000000000 00 000000111356799999999999999999999766544
No 374
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=6.8e-32 Score=283.43 Aligned_cols=230 Identities=28% Similarity=0.368 Sum_probs=191.1
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCch
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 550 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL 550 (816)
||.|+||.||++... +..||+|++...... ....+..|+.++++++||||+++++.+.. ..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999885 789999998765432 34578899999999999999999998854 47999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCcc
Q 003481 551 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 630 (816)
Q Consensus 551 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 630 (816)
.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~------ 148 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS------ 148 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCC------
Confidence 99987553 5899999999999999999999987 99999999999999999999999999987654321
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCCCCCHHHHHH
Q 003481 631 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVARR 708 (816)
Q Consensus 631 ~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~ 708 (816)
......++..|++||.+.+..++.++|+||||+++|+|++|..||...+.. ...+..+ ...++...+..
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 219 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD---------PLRFPEFLSPE 219 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC---------CCCCCCCCCHH
Confidence 124456889999999998888999999999999999999999999655431 1111111 11233344678
Q ss_pred HHHHHHHhhccCCCCCCCCh
Q 003481 709 LVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 709 l~~Li~~cl~~dP~~RPs~~ 728 (816)
+.+++.+||..||.+||++.
T Consensus 220 l~~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 220 ARDLISGLLQKDPTKRLGSG 239 (250)
T ss_pred HHHHHHHHhcCCHhhCCCcc
Confidence 89999999999999999995
No 375
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=278.92 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=200.7
Q ss_pred HHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--
Q 003481 462 LADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE-- 536 (816)
Q Consensus 462 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-- 536 (816)
|.|+-..|+ ..||+|+|+.|-.++.. |..||||++.+.......++.+|++++.+. .|+||++|+.||++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 677777776 57999999999988764 899999999988777788899999999999 59999999999965
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC---CeeEeec
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDF 613 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vkL~DF 613 (816)
..|||||.|.||+|..+|.++. .+++.++.+++.+|+.||.|||..+ |.||||||+|||-.... -+|||||
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred eEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecc
Confidence 4899999999999999998775 4788999999999999999999987 99999999999996543 4899999
Q ss_pred ccceeccCCCCcC-CCccccCCCCCCCCCCCccccc-----cCCCCcchhHhHHHHHHHHHHhCCCCCCChHH-------
Q 003481 614 GICRLVTEDTLYL-PSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE------- 680 (816)
Q Consensus 614 Gla~~~~~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~------- 680 (816)
.+..-+....... .+.-....++|+..|||||+.. ...|+.++|.||||||||-||+|.+||.+.-.
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 8876654322221 1222345778999999999642 23688999999999999999999999953221
Q ss_pred ----------HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 681 ----------VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 681 ----------~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
....+..|++.- ...+| ..++....+|+...+..++.+|-++.+.+
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkYeF----PdkdW-ahIS~eakdlisnLlvrda~~rlsa~~vl 359 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKYEF----PDKDW-AHISSEAKDLISNLLVRDAKQRLSAAQVL 359 (463)
T ss_pred CCccHHHHHHHHHHHhccCCcC----Chhhh-HHhhHHHHHHHHHHHhccHHhhhhhhhcc
Confidence 222233333321 01122 23677889999999999999999887544
No 376
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.3e-32 Score=285.49 Aligned_cols=262 Identities=26% Similarity=0.398 Sum_probs=200.9
Q ss_pred HHHhcCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcC--CCCceeeEecccc--C----C
Q 003481 466 QTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL--QHPHLVTLLGACP--E----A 537 (816)
Q Consensus 466 ~~~t~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l--~HpnIv~l~g~~~--~----~ 537 (816)
++........+.||+|.||.||+|.+.|..||||++.... ...+.+|.+|++.. +|+||+.+++.-. . .
T Consensus 207 RTiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 207 RTIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred HhhhheeEEEEEecCccccceeeccccCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 3444567778899999999999999999999999997543 34577888887754 9999999998752 1 3
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-----cCCCceeeCCCCCCceEecCCCCeeEee
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-----SKPEKIVHGDLKPQNILLDSELSSKICD 612 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-----~~~~~ivHrDIkp~NILl~~~~~vkL~D 612 (816)
++||.+|.+.|||.|+|.+. .++....++++..+|.||++||. .|.+.|.|||||+.|||+..|+...|+|
T Consensus 284 LwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 78999999999999999763 58889999999999999999995 3445699999999999999999999999
Q ss_pred cccceeccCCCCcCCCccccCCCCCCCCCCCccccccCC----CC--cchhHhHHHHHHHHHHhC----------CCCCC
Q 003481 613 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV----LT--PKSDSYSFGLIILQLLTG----------RLPVG 676 (816)
Q Consensus 613 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s--~ksDVwSlGviL~elltG----------~~Pf~ 676 (816)
+|+|.....+..... -.....+||-.|||||++...- +. ..+||||||.|+||+... ++||.
T Consensus 360 LGLAv~h~~~t~~id--i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTID--IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred ceeeEEecccCCccc--CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 999988776543321 2346678999999999885431 11 268999999999998763 35663
Q ss_pred Ch-------HHHHHHhhcCccccccCCCCCCC-CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 677 LA-------GEVRRAVSCGKLSSILDPLAGDW-PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 677 ~~-------~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
.. .+...-+...++...+++ .| .......+.+|+.-||..||.-|-|+- -+.+.|..+..
T Consensus 438 d~Vp~DPs~eeMrkVVCv~~~RP~ipn---rW~s~~~l~~m~klMkeCW~~Np~aRltAL-riKKtl~~l~~ 505 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVVCVQKLRPNIPN---RWKSDPALRVMAKLMKECWYANPAARLTAL-RIKKTLAKLSN 505 (513)
T ss_pred cCCCCCCCHHHHhcceeecccCCCCCc---ccccCHHHHHHHHHHHHhhcCCchhhhHHH-HHHHHHHHHhc
Confidence 21 122222222222222221 22 234667899999999999999999988 67777776653
No 377
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.1e-31 Score=280.62 Aligned_cols=218 Identities=24% Similarity=0.207 Sum_probs=176.4
Q ss_pred ecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCchhhhhhh
Q 003481 481 GGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQDRLFR 556 (816)
Q Consensus 481 G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL~~~l~~ 556 (816)
|.||.||++.+. ++.||+|.+.... .+.+|...+....||||+++++++.+ ..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999885 8899999986543 23445556666689999999998843 58899999999999999866
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCC
Q 003481 557 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 636 (816)
Q Consensus 557 ~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 636 (816)
.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.+....... ....
T Consensus 79 ~~---~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---------~~~~ 143 (237)
T cd05576 79 FL---NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---------DGEA 143 (237)
T ss_pred hc---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccccc---------ccCC
Confidence 43 4899999999999999999999987 9999999999999999999999999876654321 2334
Q ss_pred CCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHh
Q 003481 637 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQC 716 (816)
Q Consensus 637 gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~c 716 (816)
++..|+|||++....++.++||||||+++|+|++|..|+...... + . .......|...+..+.+|+.+|
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---~-----~---~~~~~~~~~~~~~~~~~li~~~ 212 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---I-----N---THTTLNIPEWVSEEARSLLQQL 212 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---c-----c---cccccCCcccCCHHHHHHHHHH
Confidence 677899999998888999999999999999999999887532211 0 0 0001123444667899999999
Q ss_pred hccCCCCCCCChH
Q 003481 717 CELYGRERPDITP 729 (816)
Q Consensus 717 l~~dP~~RPs~~e 729 (816)
|+.||.+||++.+
T Consensus 213 l~~dp~~R~~~~~ 225 (237)
T cd05576 213 LQFNPTERLGAGV 225 (237)
T ss_pred ccCCHHHhcCCCc
Confidence 9999999999853
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=302.02 Aligned_cols=260 Identities=26% Similarity=0.373 Sum_probs=215.0
Q ss_pred cCHHHHHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccc--
Q 003481 460 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGAC-- 534 (816)
Q Consensus 460 ~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~-- 534 (816)
..++.+..-++.|.+...||.|.+|.||+++.. ++.+|+|++.... ...+++..|.++|..+ .|||++.+||+|
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 344555566788999999999999999998764 8899999987654 3345677899999888 799999999987
Q ss_pred -----cCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCee
Q 003481 535 -----PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSK 609 (816)
Q Consensus 535 -----~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vk 609 (816)
.+.++||||||.+||..|++.... ...+.|..+..|++.++.||.+||.+. ++|||||-.||||+.++.||
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEE
Confidence 346899999999999999987766 567999999999999999999999998 99999999999999999999
Q ss_pred EeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccC-----CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH
Q 003481 610 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA 684 (816)
Q Consensus 610 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~ 684 (816)
|+|||.+..+.... .+.....|||.|||||++... .|+..+|+||||++..||--|.+|+.....++.+
T Consensus 164 LvDFGvSaQldsT~------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL 237 (953)
T KOG0587|consen 164 LVDFGVSAQLDSTV------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL 237 (953)
T ss_pred Eeeeeeeeeeeccc------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh
Confidence 99999998876433 456778899999999988543 4778999999999999999999999876665544
Q ss_pred hhcCccccccCCC-CCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 685 VSCGKLSSILDPL-AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 685 ~~~~~~~~~~d~~-~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
+..- . .|. ...-|...+..+.++|..||..|-..||++.+.|.+.+
T Consensus 238 F~Ip---R--NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpF 284 (953)
T KOG0587|consen 238 FLIP---R--NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPF 284 (953)
T ss_pred ccCC---C--CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCc
Confidence 3221 1 111 12236678889999999999999999999986554443
No 379
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=5.5e-31 Score=314.45 Aligned_cols=143 Identities=29% Similarity=0.405 Sum_probs=126.8
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCcccee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 542 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~ 542 (816)
++|.+.++||+|+||.||+|.+. +..||||++...... ....+..|+.++..++||||+++++++. +..||||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999987 889999999764332 2356889999999999999999998874 4589999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
||+.+++|.+++.... .+++..++.|+.||+.||.|||..+ |+||||||+||||+.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999986543 5788999999999999999999987 99999999999999999999999999863
No 380
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5e-31 Score=310.40 Aligned_cols=253 Identities=30% Similarity=0.471 Sum_probs=207.4
Q ss_pred hcCCCccceeeeecceEEEEEEEc---------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcC-CCCceeeEeccccC-
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKL-QHPHLVTLLGACPE- 536 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~---------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l-~HpnIv~l~g~~~~- 536 (816)
.++..+.+.||.|.||.|++|... ...||||.++..... ....+..|+.+|..+ +||||+.++|+|..
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 344455568999999999999754 346999999766443 456799999999999 69999999999954
Q ss_pred -CccceeeccCCCchhhhhhhcC-----CC--------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKS-----NV--------SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL 602 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~-----~~--------~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl 602 (816)
..++|+||+..|+|.++|.... .. ..++..+.+.++.|||.|++||++.. +|||||-..|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEe
Confidence 5889999999999999998765 00 13889999999999999999999977 9999999999999
Q ss_pred cCCCCeeEeecccceeccCCCCcCCCccccCCCCC--CCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCC--
Q 003481 603 DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG--SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGL-- 677 (816)
Q Consensus 603 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~-- 677 (816)
..+..+||+|||+|+.......+. .....| ...|||||.+....|+.++|||||||+||||+| |..||..
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~-----~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYR-----TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred cCCCEEEEccccceeccCCCCceE-----ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 999999999999999776654331 122223 334999999999999999999999999999999 8999975
Q ss_pred -hHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 678 -AGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 678 -~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
...+...+..|... ..|..+..++.++++.||+.+|.+||++. ++...|+..
T Consensus 527 ~~~~l~~~l~~G~r~--------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~-~~~~~~~~~ 579 (609)
T KOG0200|consen 527 PTEELLEFLKEGNRM--------EQPEHCSDEIYDLMKSCWNADPEDRPTFS-ECVEFFEKH 579 (609)
T ss_pred cHHHHHHHHhcCCCC--------CCCCCCCHHHHHHHHHHhCCCcccCCCHH-HHHHHHHHH
Confidence 33444455555443 23556678899999999999999999999 788888774
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=296.50 Aligned_cols=238 Identities=25% Similarity=0.327 Sum_probs=195.1
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--Ccccee
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~ 542 (816)
++..|.....+|.|+|+.|-.+... ++..++|++.....+ ..+|+.++... +||||+++.+.|.+ +.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~----~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD----NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccc----cccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 3567888888999999999999875 788999999776322 33577666666 79999999999966 478999
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe-cCCCCeeEeecccceeccC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL-DSELSSKICDFGICRLVTE 621 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl-~~~~~vkL~DFGla~~~~~ 621 (816)
|++.++-|.+.+..... +. ..+..|+.+|+.|+.|||..+ ||||||||+|||+ +..++++|+|||.++....
T Consensus 396 e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred hhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 99999988887765432 22 677789999999999999987 9999999999999 5889999999999998765
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChH---HHHHHhhcCccccccCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG---EVRRAVSCGKLSSILDPLA 698 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~---~~~~~~~~~~~~~~~d~~~ 698 (816)
.. ...+-|..|.|||++....|+++|||||||++||+||+|+.||.... ++...+..+.
T Consensus 469 ~~---------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~--------- 530 (612)
T KOG0603|consen 469 SC---------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK--------- 530 (612)
T ss_pred hh---------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc---------
Confidence 41 34467889999999999999999999999999999999999996322 2333333322
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHH
Q 003481 699 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 736 (816)
Q Consensus 699 ~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le 736 (816)
+...++....+|+.+||+.||.+||++.+...+.+-
T Consensus 531 --~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 531 --FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred --cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 335678899999999999999999999977766655
No 382
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=3.3e-32 Score=275.61 Aligned_cols=200 Identities=26% Similarity=0.353 Sum_probs=165.5
Q ss_pred cCCCccceeeeecceEEEEEEEc------CeEEEEEEeccCCcc-c-HHHHHHHHHHHhcCCCCceeeEeccccC---Cc
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNMQ-G-QLEFQQEVRVLSKLQHPHLVTLLGACPE---AW 538 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~------g~~vAiK~l~~~~~~-~-~~~~~~E~~il~~l~HpnIv~l~g~~~~---~~ 538 (816)
..|.....||+|.||.||++... ...+|||.++..... + .....+|+.+++.++|||++.|..+|-. ..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 35778889999999999999553 236999998765322 1 2346789999999999999999988743 48
Q ss_pred cceeeccCCCchhhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC----CCeeEee
Q 003481 539 SLVYEYLPNGSLQDRLFRKS--NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE----LSSKICD 612 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~----~~vkL~D 612 (816)
+|+++|.+. +|..+|..+. ....++-..+..|+.||+.|+.|||++. |+||||||.|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence 899999965 8888886443 2356888999999999999999999998 9999999999999887 8999999
Q ss_pred cccceeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCC
Q 003481 613 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVG 676 (816)
Q Consensus 613 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~ 676 (816)
||+++.+..... .......++-|+.|.|||.+.+ ..||++.||||.|||+.||+|-.+.|.
T Consensus 180 lGlaR~~~~plk---pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 180 LGLARLFNNPLK---PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred ccHHHHhhcccc---ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 999999875442 2233456778999999998766 479999999999999999999888774
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=278.16 Aligned_cols=253 Identities=23% Similarity=0.282 Sum_probs=196.1
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC--CC----ceeeEecccc--CC
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ--HP----HLVTLLGACP--EA 537 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~--Hp----nIv~l~g~~~--~~ 537 (816)
.+++|.+..++|+|.||.|-.+.+. +..||||+++.-. .-.+...-|+++|.++. -| -+|++.+||+ ++
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 3789999999999999999999876 6789999986533 22334567999999993 22 3788888884 56
Q ss_pred ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC-------------
Q 003481 538 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS------------- 604 (816)
Q Consensus 538 ~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~------------- 604 (816)
.|||+|.+ |-|+.++|..++ ..+++...+..|+.|++.+++|||+.+ ++|-||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred eEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCcc
Confidence 88999998 669999996654 467899999999999999999999998 999999999999932
Q ss_pred -------CCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCC
Q 003481 605 -------ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL 677 (816)
Q Consensus 605 -------~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~ 677 (816)
+..++|+|||.|....... ...+.|..|.|||++.+-+++..+||||+||||+||.||...|..
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h---------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH---------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc---------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 3458999999998765433 556789999999999999999999999999999999999998864
Q ss_pred hHHHHH-----------------------HhhcCccc-----------cccCCCC-----CCCCHHHHHHHHHHHHHhhc
Q 003481 678 AGEVRR-----------------------AVSCGKLS-----------SILDPLA-----GDWPTFVARRLVDLGLQCCE 718 (816)
Q Consensus 678 ~~~~~~-----------------------~~~~~~~~-----------~~~d~~~-----~~~~~~~~~~l~~Li~~cl~ 718 (816)
.+.... ....|.+. ...++.. ....+.....|.+|+.+||.
T Consensus 312 Hen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~ 391 (415)
T KOG0671|consen 312 HENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLE 391 (415)
T ss_pred CCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHc
Confidence 332111 01111110 0011000 00122455679999999999
Q ss_pred cCCCCCCCChHHHHHHH
Q 003481 719 LYGRERPDITPSLVKEL 735 (816)
Q Consensus 719 ~dP~~RPs~~e~l~~~L 735 (816)
.||.+|+|+.|++.+.+
T Consensus 392 fDP~~RiTl~EAL~HpF 408 (415)
T KOG0671|consen 392 FDPARRITLREALSHPF 408 (415)
T ss_pred cCccccccHHHHhcCHH
Confidence 99999999998887655
No 384
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.5e-31 Score=268.25 Aligned_cols=246 Identities=22% Similarity=0.275 Sum_probs=194.3
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l-~HpnIv~l~g~~~--~~~~lV 541 (816)
++|.....||+|+|+.|..+++. .+.+|+|++++.-. .+..-++.|-.+..+. +||.+|-|..+|. ..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 46788899999999999999885 67899999877533 2333456787787776 7999999999984 358999
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
.||++||+|.-++.+.. .|+++.+.-+..+|+.||.|||+.| ||.||||.+|+|||..|++||+|+|+++.--.
T Consensus 330 ieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCC
Confidence 99999999988876654 5888999999999999999999988 99999999999999999999999999987543
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCccccccCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAG 699 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~~~~~~d~~~~ 699 (816)
... .+...+|||.|+|||++.+..|+..+|+|+|||+++||+.|+.||...+.- .... ...+.+++-....
T Consensus 404 ~gd------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nt-edylfqvilekqi 476 (593)
T KOG0695|consen 404 PGD------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNT-EDYLFQVILEKQI 476 (593)
T ss_pred CCc------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccch-hHHHHHHHhhhcc
Confidence 332 346778999999999999999999999999999999999999999643210 0000 0011111111112
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
..|...+-....+++.-|++||.+|....
T Consensus 477 riprslsvkas~vlkgflnkdp~erlgc~ 505 (593)
T KOG0695|consen 477 RIPRSLSVKASHVLKGFLNKDPKERLGCR 505 (593)
T ss_pred cccceeehhhHHHHHHhhcCCcHHhcCCC
Confidence 34555666778888999999999996543
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=5e-30 Score=266.30 Aligned_cols=231 Identities=29% Similarity=0.382 Sum_probs=189.2
Q ss_pred cceEEEEEEEc--CeEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccCCCchhhhhhh
Q 003481 482 GFGCVYKGEML--GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFR 556 (816)
Q Consensus 482 ~~g~Vy~~~~~--g~~vAiK~l~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~~gsL~~~l~~ 556 (816)
+||.||+|... +..|++|++....... ...+.+|+..+++++|+||+++++++. ...++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 68999999986 6899999998766555 678999999999999999999999985 458899999999999999865
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCC
Q 003481 557 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 636 (816)
Q Consensus 557 ~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~ 636 (816)
.. .+++..++.++.+++.+|.|||..+ ++|+||+|+||+++.++.++|+|||.+....... ......
T Consensus 81 ~~---~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~ 147 (244)
T smart00220 81 RG---RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-------LLTTFV 147 (244)
T ss_pred cc---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc-------cccccc
Confidence 43 2889999999999999999999987 9999999999999999999999999998876542 124456
Q ss_pred CCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH---HHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 003481 637 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLG 713 (816)
Q Consensus 637 gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li 713 (816)
++..|++||.+....++.++||||||+++|+|++|..||..... .......+.... ......++..+.+++
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i 221 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF------PPPEWKISPEAKDLI 221 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC------ccccccCCHHHHHHH
Confidence 88899999999888899999999999999999999999965222 222221111110 000001456899999
Q ss_pred HHhhccCCCCCCCChHHH
Q 003481 714 LQCCELYGRERPDITPSL 731 (816)
Q Consensus 714 ~~cl~~dP~~RPs~~e~l 731 (816)
.+||..+|.+||++.+.+
T Consensus 222 ~~~l~~~p~~Rp~~~~~~ 239 (244)
T smart00220 222 RKLLVKDPEKRLTAEEAL 239 (244)
T ss_pred HHHccCCchhccCHHHHh
Confidence 999999999999998544
No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.6e-31 Score=261.92 Aligned_cols=256 Identities=23% Similarity=0.389 Sum_probs=192.6
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC----------
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE---------- 536 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~g~~~~---------- 536 (816)
.|....+||+|.||.||+++.. |+.||+|++...+. .-...-.+|+++|..|+|+|++.++..|..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4566678999999999999775 78899987654332 122345789999999999999999998821
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
..||||.+|+. +|..+|.... ..++..++.+++.++..||.|+|.+. |+|||+||.|+||+.+|.+||+|||++
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccc
Confidence 27899999964 7888875543 46888999999999999999999998 999999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHH--h--hcCccc
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--V--SCGKLS 691 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~--~--~~~~~~ 691 (816)
+.+........ ...+..+-|..|.+||.+.+ ..|+++.|||+-|||+.||+||.+-|....+.... + ..|.+.
T Consensus 172 r~fs~~~n~~k--prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 172 RAFSTSKNVVK--PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cceecccccCC--CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 87764432211 23466778999999997765 57999999999999999999999998755442221 1 122221
Q ss_pred cccCCCCCCC-----------CH-------------HHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 692 SILDPLAGDW-----------PT-------------FVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 692 ~~~d~~~~~~-----------~~-------------~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.-+-|...++ +. .-.+...+|+.+++..||.+||+..+++-+.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 1111111110 00 0122578999999999999999999655443
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.1e-29 Score=289.26 Aligned_cols=258 Identities=21% Similarity=0.240 Sum_probs=181.1
Q ss_pred HhcCCCccceeeeecceEEEEEEE------------------cCeEEEEEEeccCCcccHHH--------------HHHH
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEM------------------LGRTVAIKMLYSHNMQGQLE--------------FQQE 515 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~------------------~g~~vAiK~l~~~~~~~~~~--------------~~~E 515 (816)
.+++|.+.++||+|+||.||+|.+ .++.||||++.......... +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 14679999986544322223 3346
Q ss_pred HHHHhcCCCCce-----eeEecccc----------CCccceeeccCCCchhhhhhhcCC---------------------
Q 003481 516 VRVLSKLQHPHL-----VTLLGACP----------EAWSLVYEYLPNGSLQDRLFRKSN--------------------- 559 (816)
Q Consensus 516 ~~il~~l~HpnI-----v~l~g~~~----------~~~~lV~E~~~~gsL~~~l~~~~~--------------------- 559 (816)
+.++.+++|.++ ++++++|. +..+|||||+++++|.++|.....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766654 67777763 236899999999999998864321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCC
Q 003481 560 VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 639 (816)
Q Consensus 560 ~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~ 639 (816)
...++|..+..|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......... ......+|+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-----~~~~g~~tp 374 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-----NPLYGMLDP 374 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-----CccccCCCc
Confidence 123578889999999999999999987 999999999999999999999999999765433211 112334588
Q ss_pred CCCCccccccCC--------------------C--CcchhHhHHHHHHHHHHhCCC-CCCChHHHHHHhhc--Cccc--c
Q 003481 640 PYADPEYHRTGV--------------------L--TPKSDSYSFGLIILQLLTGRL-PVGLAGEVRRAVSC--GKLS--S 692 (816)
Q Consensus 640 ~Y~aPE~~~~~~--------------------~--s~ksDVwSlGviL~elltG~~-Pf~~~~~~~~~~~~--~~~~--~ 692 (816)
.|+|||.+.... + ..+.||||+||++|+|++|.. ||............ ..+. .
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 999999875332 1 235799999999999999885 76532211111100 0000 0
Q ss_pred ccCCCCCCC--CHHHHHHHHHHHHHhhccCC---CCCCCChHHHHH
Q 003481 693 ILDPLAGDW--PTFVARRLVDLGLQCCELYG---RERPDITPSLVK 733 (816)
Q Consensus 693 ~~d~~~~~~--~~~~~~~l~~Li~~cl~~dP---~~RPs~~e~l~~ 733 (816)
.......++ ....+....+|+.+||..+| .+|+|+.+.|.|
T Consensus 455 ~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 455 MYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred hhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000001111 22356789999999999866 689999976643
No 388
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=5.9e-30 Score=240.62 Aligned_cols=249 Identities=22% Similarity=0.273 Sum_probs=188.5
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~ 544 (816)
+|...++||+|.||+||+|+.. +..||+|.++.+... -.....+|+-+|+.++|.|||++++... ....||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4666788999999999999875 788999998765432 2345789999999999999999999874 458899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
|.. +|..++...+ ..++.+.+..++.|+++||.|+|+++ +.||||||.|+||+.||.+||+|||+++.+.-...
T Consensus 83 cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred hhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 954 7888776654 46888999999999999999999998 99999999999999999999999999998764331
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHh-CCCCCCChHHHHHH---h-hcCc-----cc--
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRA---V-SCGK-----LS-- 691 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~---~-~~~~-----~~-- 691 (816)
.....+-|..|.+|.++.+. -|++..|+||-|||+.|+.. |++.|...+-..+. + .-|. +.
T Consensus 157 ------cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 157 ------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred ------eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcc
Confidence 23455679999999987664 58999999999999999998 55556433321111 1 1111 11
Q ss_pred -cccCCCC-CCCCH---------HHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 692 -SILDPLA-GDWPT---------FVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 692 -~~~d~~~-~~~~~---------~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
.+.|... +-+|. .....-.+|+.+.+.-+|..|.++...+
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaal 281 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAAL 281 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHh
Confidence 1111110 11111 1222447889999999999999988544
No 389
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=1.5e-29 Score=295.12 Aligned_cols=256 Identities=24% Similarity=0.232 Sum_probs=168.8
Q ss_pred HhcCCCccceeeeecceEEEEEEEc------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecc--------
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA-------- 533 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~-------- 533 (816)
..++|...+.||+|+||.||+|++. +..||+|++..... .+.+.++ .+....+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4678999999999999999999885 56899998764321 1111121 1222223333333222
Q ss_pred ccCCccceeeccCCCchhhhhhhcCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCC
Q 003481 534 CPEAWSLVYEYLPNGSLQDRLFRKSNV-----------------SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLK 596 (816)
Q Consensus 534 ~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIk 596 (816)
.....+|||||+.+++|.+++...... .......+..|+.||+.||.|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 123578999999999999988654210 01123345679999999999999987 9999999
Q ss_pred CCceEecC-CCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccC----------------------CCC
Q 003481 597 PQNILLDS-ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG----------------------VLT 653 (816)
Q Consensus 597 p~NILl~~-~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------------------~~s 653 (816)
|+||||+. ++.+||+|||+|+.+...... ......+|+.|+|||.+... .++
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~-----~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY-----IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccccc-----CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 99999985 579999999999866443221 23456789999999965322 234
Q ss_pred cchhHhHHHHHHHHHHhCCCCCCChHH-HHHHhhcCc-----cccccCCCC-CC------CCHHHHHHHHHHHHHhhccC
Q 003481 654 PKSDSYSFGLIILQLLTGRLPVGLAGE-VRRAVSCGK-----LSSILDPLA-GD------WPTFVARRLVDLGLQCCELY 720 (816)
Q Consensus 654 ~ksDVwSlGviL~elltG~~Pf~~~~~-~~~~~~~~~-----~~~~~d~~~-~~------~~~~~~~~l~~Li~~cl~~d 720 (816)
.++|||||||+||||+++..|+..... ....+.... +...+.+.. .+ ..........+|+.+||+.|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 567999999999999998877643211 111111110 001111110 00 00011234568999999999
Q ss_pred CCCCCCChHHHHHHH
Q 003481 721 GRERPDITPSLVKEL 735 (816)
Q Consensus 721 P~~RPs~~e~l~~~L 735 (816)
|.+|||+.+.+.+.+
T Consensus 438 P~kR~ta~e~L~Hpf 452 (566)
T PLN03225 438 GRQRISAKAALAHPY 452 (566)
T ss_pred cccCCCHHHHhCCcC
Confidence 999999997665543
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=294.45 Aligned_cols=248 Identities=31% Similarity=0.405 Sum_probs=191.8
Q ss_pred CCccceeeeecceE-EEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--CccceeeccCC
Q 003481 472 FSESFKVGQGGFGC-VYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPN 547 (816)
Q Consensus 472 f~~~~~LG~G~~g~-Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~E~~~~ 547 (816)
|...+.+|.|..|+ ||+|.+.|+.||||++.... .....+|+..|+.- .|||||++|+.-.+ ..||..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~- 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA- 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-
Confidence 44556689999875 69999999999999985433 22456899999888 69999999987644 3789999994
Q ss_pred CchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC---C--CCeeEeecccceeccC
Q 003481 548 GSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS---E--LSSKICDFGICRLVTE 621 (816)
Q Consensus 548 gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~---~--~~vkL~DFGla~~~~~ 621 (816)
.+|.+++.... ......--..+.+..|++.||++||+.+ ||||||||.||||+. + ..++|+|||+++.+..
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 59999997631 1111111335678999999999999988 999999999999975 3 4699999999999887
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhC-CCCCCChHHHHHHhhcCccccccCCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTG-RLPVGLAGEVRRAVSCGKLSSILDPLAGD 700 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG-~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~ 700 (816)
+... +.+.....||-+|+|||++....-+.++|||||||++|+.++| .+||+..-.-...+..|+..-.. . ..
T Consensus 664 ~~sS---~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~--L-~~ 737 (903)
T KOG1027|consen 664 GKSS---FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVH--L-EP 737 (903)
T ss_pred Ccch---hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceee--e-cc
Confidence 6543 3346778899999999999998888899999999999999995 89998665544445545432111 0 11
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 701 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 701 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
.+.. ...+||.+|++++|..||++.+.|.|.|
T Consensus 738 ~~d~---eA~dLI~~ml~~dP~~RPsa~~VL~HPl 769 (903)
T KOG1027|consen 738 LPDC---EAKDLISRMLNPDPQLRPSATDVLNHPL 769 (903)
T ss_pred CchH---HHHHHHHHhcCCCcccCCCHHHHhCCCc
Confidence 1111 7889999999999999999997776544
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=243.81 Aligned_cols=205 Identities=25% Similarity=0.401 Sum_probs=164.5
Q ss_pred HHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEeccc--cCCc
Q 003481 465 LQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGAC--PEAW 538 (816)
Q Consensus 465 l~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~-~~~~~~~~~E~~il~~l-~HpnIv~l~g~~--~~~~ 538 (816)
+....+....+..||+|+||.|-+-++. |...|+|.+...- .+.+++..+|+++..+. .+|.+|.+||.. +.+.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 3333444555667999999998777664 9999999997653 35566788999987766 799999999986 4468
Q ss_pred cceeeccCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 539 SLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 539 ~lV~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
++.||.|+ .||..+-.+. .....+++..+-+|+..+..||.|||+.- .+||||+||+|||++.+|++|+||||++-
T Consensus 121 wIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccce
Confidence 89999994 5776654322 22356888888999999999999999975 59999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccc----cCCCCcchhHhHHHHHHHHHHhCCCCCCChH
Q 003481 618 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHR----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 679 (816)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~s~ksDVwSlGviL~elltG~~Pf~~~~ 679 (816)
.+.+... .+...|-..|||||.+. ...|+.++||||||++++||.+++.||....
T Consensus 198 ~L~dSiA-------kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 198 YLVDSIA-------KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred eehhhhH-------HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 8765442 24456888999999774 3479999999999999999999999997544
No 392
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=6.7e-29 Score=258.24 Aligned_cols=263 Identities=24% Similarity=0.345 Sum_probs=213.4
Q ss_pred CHHHHHHHhcCCCccceeeeecceEEEEEEEc-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEec
Q 003481 461 SLADLQTATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLG 532 (816)
Q Consensus 461 ~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-------g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g 532 (816)
...+|..-.++++....+-+|.||.||.|.+. .+.|-+|.++....+ ....|..|.-.|..+.|||+..+.|
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 35677777788999999999999999999775 234667776554433 2345788999999999999999999
Q ss_pred cccC---CccceeeccCCCchhhhhh-----hcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC
Q 003481 533 ACPE---AWSLVYEYLPNGSLQDRLF-----RKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS 604 (816)
Q Consensus 533 ~~~~---~~~lV~E~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~ 604 (816)
++.+ .++++|.++.-|+|..+|. .......++-.+...++.|++.|+.|||+++ |||.||...|.+||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehh
Confidence 9843 4789999999999999998 3344556778888999999999999999988 999999999999999
Q ss_pred CCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHH--H
Q 003481 605 ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--V 681 (816)
Q Consensus 605 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~--~ 681 (816)
...+||+|=.+++.+-+.+... -...-.....||+||.+.+..|+.++|||||||+||||+| |+.|+...+. +
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhc----LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm 507 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHC----LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM 507 (563)
T ss_pred heeEEeccchhccccCcccccc----cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence 9999999999999876655321 1223334567999999999999999999999999999999 9999975553 4
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 682 RRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 682 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
...+..|... ..|.+++++|..++.-||...|++||++. .|++-|..+.
T Consensus 508 ~~ylkdGyRl--------aQP~NCPDeLf~vMacCWallpeeRPsf~-Qlv~cLseF~ 556 (563)
T KOG1024|consen 508 EHYLKDGYRL--------AQPFNCPDELFTVMACCWALLPEERPSFS-QLVICLSEFH 556 (563)
T ss_pred HHHHhcccee--------cCCCCCcHHHHHHHHHHHhcCcccCCCHH-HHHHHHHHHH
Confidence 4555555432 23556778999999999999999999999 6777776654
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=2.8e-28 Score=237.57 Aligned_cols=247 Identities=21% Similarity=0.332 Sum_probs=191.8
Q ss_pred hcCCCccceeeeecceEEEEEEE--cCeEEEEEEeccCCcccHHHHHHHHHHHhcCC-CCceeeEeccccC----Cccce
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE----AWSLV 541 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~--~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~----~~~lV 541 (816)
.++|++.+++|+|.|+.||.|.. .+..++||++++- ..+.+.+|+.||..|. ||||++|++...+ .+.||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 46788999999999999999985 4789999999754 3456789999999997 9999999999854 37899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-CCeeEeecccceecc
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICRLVT 620 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkL~DFGla~~~~ 620 (816)
+||+++.+...+. +.|+..++..++.+++.||.|+|+.| |+|||+||.|+++|.. -.++|+|+|+|....
T Consensus 114 FE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcC
Confidence 9999998887765 45777889999999999999999998 9999999999999864 569999999999887
Q ss_pred CCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCC-h---------------HHHHH
Q 003481 621 EDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGL-A---------------GEVRR 683 (816)
Q Consensus 621 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~-~---------------~~~~~ 683 (816)
++.. ....+.+..|--||.+.. ..|+.+-|+|||||+|..|+..+.||.. . ++...
T Consensus 185 p~~e-------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~ 257 (338)
T KOG0668|consen 185 PGKE-------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYA 257 (338)
T ss_pred CCce-------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHH
Confidence 6653 244567788999998754 4688999999999999999999999841 1 11111
Q ss_pred HhhcCc------cccccCCC-CCCCCH--------HHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 684 AVSCGK------LSSILDPL-AGDWPT--------FVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 684 ~~~~~~------~~~~~d~~-~~~~~~--------~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
.+..-. +..++... ...|.. -.+++..+|+.+.|..|-.+|||+.+.+.+.
T Consensus 258 Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp 323 (338)
T KOG0668|consen 258 YLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP 323 (338)
T ss_pred HHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence 111111 11111110 111211 2346889999999999999999999766544
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.9e-29 Score=248.86 Aligned_cols=252 Identities=25% Similarity=0.354 Sum_probs=189.5
Q ss_pred CCCccceeeeecceEEEEEEEc--CeEEEEEEeccC--CcccHHHHHHHHHHHhcCCCCceeeEecccc-------CCcc
Q 003481 471 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH--NMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-------EAWS 539 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-------~~~~ 539 (816)
+....+.||.|+||.||.+++. |+.||+|++..- +....+.+.+|+.+|.-++|.|++..++... ++.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 3455678999999999999885 899999988543 2334567889999999999999999887652 3478
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
+|.|.| ..+|..+|... ..|+-..+.-+++||++||.|||+.+ |.||||||.|+|++.|..+||||||+++..
T Consensus 134 V~TELm-QSDLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHH-HhhhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEeccccccccc
Confidence 899988 45788877543 46888889999999999999999988 999999999999999999999999999987
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHH---------------
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--------------- 683 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~--------------- 683 (816)
..+... .++.-+-|..|.|||++.+. .|+.+.||||.|||+.||+..+..|...+.+.+
T Consensus 207 e~d~~~-----hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~Ea 281 (449)
T KOG0664|consen 207 DQRDRL-----NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEA 281 (449)
T ss_pred chhhhh-----hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHH
Confidence 654421 34555678899999988765 799999999999999999999888853322211
Q ss_pred --HhhcCccccccCCC--CCCC--------CHHHHHHHHHHHHHhhccCCCCCCCChHHHHHH
Q 003481 684 --AVSCGKLSSILDPL--AGDW--------PTFVARRLVDLGLQCCELYGRERPDITPSLVKE 734 (816)
Q Consensus 684 --~~~~~~~~~~~d~~--~~~~--------~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~ 734 (816)
...+|.-..++... .+.+ +..-......+..+++..||..|.+..+.+.+.
T Consensus 282 Mr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 282 MKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 11222221121110 1111 112233567788889999999999887655443
No 395
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=9.2e-29 Score=272.39 Aligned_cols=251 Identities=25% Similarity=0.314 Sum_probs=207.9
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCccceeec
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEY 544 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~ 544 (816)
.++|.....+|.|.||.||++++. +...|+|+++.....+..-.++|+-++...+|||||.++|.+ .+..+++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 357888899999999999999886 889999999988878888888999999999999999999998 4679999999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 624 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~ 624 (816)
|.+|+|.++-+-. .++++.++...++..+.||+|||+.+ -+|||||-.|||+++.|.+||.|||.+..+....
T Consensus 94 cgggslQdiy~~T---gplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati- 166 (829)
T KOG0576|consen 94 CGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATI- 166 (829)
T ss_pred cCCCcccceeeec---ccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhh-
Confidence 9999999976543 47889999999999999999999988 8999999999999999999999999987765432
Q ss_pred cCCCccccCCCCCCCCCCCcccc---ccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYH---RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
.+.....||+.|||||+. ..+.|...+|||++|+...|+---++|.......+..... ....++|....-
T Consensus 167 -----~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm--TkS~~qpp~lkD 239 (829)
T KOG0576|consen 167 -----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM--TKSGFQPPTLKD 239 (829)
T ss_pred -----hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh--hccCCCCCcccC
Confidence 345778899999999965 5678999999999999999999888886544443322211 112233332233
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCChHHHHH
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDITPSLVK 733 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~ 733 (816)
+......|.+|++.|+..+|++||+...+|.+
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 44566789999999999999999999865543
No 396
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=2.2e-28 Score=262.00 Aligned_cols=258 Identities=23% Similarity=0.295 Sum_probs=199.6
Q ss_pred HHHHhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC------CCceeeEeccc--
Q 003481 465 LQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ------HPHLVTLLGAC-- 534 (816)
Q Consensus 465 l~~~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~g~~-- 534 (816)
.+...++|.+....|+|-|++|.+|.+. |..||||++....... +.=+.|+.||.+|+ --|+++|+-.|
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~-KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH-KTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh-hhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 3446678999999999999999999886 8899999997654332 23357999999995 33788888776
Q ss_pred cCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-CCeeEeec
Q 003481 535 PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDF 613 (816)
Q Consensus 535 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkL~DF 613 (816)
.+++|||+|-+ ..+|.++|.+.+..-.|....+..++.|+..||..|-..+ |+|.||||+|||++++ ..+|||||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccC
Confidence 45799999988 5599999998877677888999999999999999999988 9999999999999865 56999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHH--------
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRR-------- 683 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~-------- 683 (816)
|.|........ +...-+..|.|||++.+-+|+...|+||.||+||||.||+..|.+... +..
T Consensus 582 GSA~~~~enei--------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk 653 (752)
T KOG0670|consen 582 GSASFASENEI--------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGK 653 (752)
T ss_pred ccccccccccc--------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCC
Confidence 99988765442 233345679999999999999999999999999999999998853321 111
Q ss_pred ----HhhcCccc---------------------------cccCCC---------CCCCCH---HHHHHHHHHHHHhhccC
Q 003481 684 ----AVSCGKLS---------------------------SILDPL---------AGDWPT---FVARRLVDLGLQCCELY 720 (816)
Q Consensus 684 ----~~~~~~~~---------------------------~~~d~~---------~~~~~~---~~~~~l~~Li~~cl~~d 720 (816)
++..|.+. ..+.|. ...+|. ....+|.+|+.+||..|
T Consensus 654 ~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 654 FPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred CcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccC
Confidence 11111110 001110 001222 34557899999999999
Q ss_pred CCCCCCChHHHHHHH
Q 003481 721 GRERPDITPSLVKEL 735 (816)
Q Consensus 721 P~~RPs~~e~l~~~L 735 (816)
|++|.+..++|.|.|
T Consensus 734 P~KRit~nqAL~HpF 748 (752)
T KOG0670|consen 734 PEKRITVNQALKHPF 748 (752)
T ss_pred hhhcCCHHHHhcCCc
Confidence 999999998887654
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.4e-26 Score=234.00 Aligned_cols=204 Identities=37% Similarity=0.545 Sum_probs=178.3
Q ss_pred eeeecceEEEEEEEc--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCchhh
Q 003481 478 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQD 552 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL~~ 552 (816)
||.|++|.||++... +..+++|++...... ....+.+|+..+..++|++|+++++++.. ..++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999997 899999999766543 34578999999999999999999999855 6889999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC-CCCeeEeecccceeccCCCCcCCCccc
Q 003481 553 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFGICRLVTEDTLYLPSFHR 631 (816)
Q Consensus 553 ~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~-~~~vkL~DFGla~~~~~~~~~~~~~~~ 631 (816)
++.... ..+++..++.++.+++.+|.|||+.+ ++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~------~ 149 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS------L 149 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc------h
Confidence 987653 35889999999999999999999987 999999999999999 89999999999987654321 1
Q ss_pred cCCCCCCCCCCCccccccC-CCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 003481 632 STAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLV 710 (816)
Q Consensus 632 ~~~~~gt~~Y~aPE~~~~~-~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~ 710 (816)
.....+...|++||.+... .++.++|+|+||+++++| ..+.
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------~~~~ 191 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------PELK 191 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------HHHH
Confidence 2345688899999998877 888999999999999999 5788
Q ss_pred HHHHHhhccCCCCCCCChHH
Q 003481 711 DLGLQCCELYGRERPDITPS 730 (816)
Q Consensus 711 ~Li~~cl~~dP~~RPs~~e~ 730 (816)
+++..|++.+|.+||++.+.
T Consensus 192 ~~l~~~l~~~p~~R~~~~~l 211 (215)
T cd00180 192 DLIRKMLQKDPEKRPSAKEI 211 (215)
T ss_pred HHHHHHhhCCcccCcCHHHH
Confidence 99999999999999999843
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.7e-27 Score=249.56 Aligned_cols=128 Identities=27% Similarity=0.363 Sum_probs=108.9
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC-----C---CceeeEeccccC---
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-----H---PHLVTLLGACPE--- 536 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~-----H---pnIv~l~g~~~~--- 536 (816)
++|.+.++||.|.|++||++.+. .+.||+|+.+... .-.+....|+++|++++ | .+||+|++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 68999999999999999999886 6789999986533 23345678999999983 3 379999999832
Q ss_pred ---CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe
Q 003481 537 ---AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL 602 (816)
Q Consensus 537 ---~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl 602 (816)
+.|+|+|++ |.+|..+|..... ..++...+..|+.||+.||.|||..+ +|||-||||+||||
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 489999999 7788888876543 56899999999999999999999987 69999999999999
No 399
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2e-27 Score=242.82 Aligned_cols=252 Identities=23% Similarity=0.258 Sum_probs=192.1
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccC--CcccHHHHHHHHHHHhcCCCCceeeEecccc--------C
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH--NMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--------E 536 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~--------~ 536 (816)
..+|.....+|.|.- .|-.+-+. +++||+|.+... .........+|..++..++|+||++++.+|. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777788899988 55555443 899999987543 2234456789999999999999999999982 1
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
+.|+|||+|. .+|...+.. .++-..+..|+.|++.|+.|||+.+ |+||||||+||++..++.+||.|||+|
T Consensus 95 e~y~v~e~m~-~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM-----ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence 4799999994 588887763 3555778899999999999999998 999999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhc---------
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC--------- 687 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~--------- 687 (816)
+.-..+. ..+..+.|..|.|||++.+..|...+||||+||++.||++|+..|.+.+.+.+....
T Consensus 166 r~e~~~~-------~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~ 238 (369)
T KOG0665|consen 166 RTEDTDF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDP 238 (369)
T ss_pred cccCccc-------ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCH
Confidence 8765431 456778999999999998888999999999999999999999988644332221100
Q ss_pred ----------------------CccccccC----CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 003481 688 ----------------------GKLSSILD----PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 737 (816)
Q Consensus 688 ----------------------~~~~~~~d----~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~ 737 (816)
-.+.+.+. +...+.+......+.+|+.+||-.||++|.+..++|.|..-.
T Consensus 239 ~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 239 SFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 00111110 000111222345688999999999999999999777665443
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.2e-25 Score=231.26 Aligned_cols=196 Identities=36% Similarity=0.515 Sum_probs=169.2
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEecccc--CCccceeeccC
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 546 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~g~~~--~~~~lV~E~~~ 546 (816)
|.....||.|++|.||++... +..+++|.+...... ....+.+|+..+.+++|+|++++++++. ...++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 556788999999999999986 689999999876655 5668899999999999999999999885 45889999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
+++|.+++..... .+++..+..++.+++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||++........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-- 153 (225)
T smart00221 81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-- 153 (225)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc--
Confidence 9999999876432 2789999999999999999999987 99999999999999999999999999988754320
Q ss_pred CCccccCCCCCCCCCCCcccc-ccCCCCcchhHhHHHHHHHHHHhCCCCCCC
Q 003481 627 PSFHRSTAPKGSFPYADPEYH-RTGVLTPKSDSYSFGLIILQLLTGRLPVGL 677 (816)
Q Consensus 627 ~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~ksDVwSlGviL~elltG~~Pf~~ 677 (816)
.......++..|++||.+ ....++.++|||+||+++|+|++|+.||..
T Consensus 154 ---~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ---ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ---ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 012344678889999998 667788899999999999999999999965
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=3.6e-27 Score=255.88 Aligned_cols=193 Identities=22% Similarity=0.328 Sum_probs=165.1
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcc------c--HHHHHHHHHHHhcCC---CCceeeEeccccC
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ------G--QLEFQQEVRVLSKLQ---HPHLVTLLGACPE 536 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~------~--~~~~~~E~~il~~l~---HpnIv~l~g~~~~ 536 (816)
.+|.....||.|+||.|+++.+. ...|+||.+.+...- + ...+-.|+.||..|+ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35888999999999999999986 678999998765421 1 113557999999997 9999999999965
Q ss_pred --CccceeeccC-CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeec
Q 003481 537 --AWSLVYEYLP-NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 613 (816)
Q Consensus 537 --~~~lV~E~~~-~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DF 613 (816)
.+||+||--. +-+|.++|..+. .+++.+..-|+.||+.|+++||+.+ |||||||-+||.++.+|-+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeec
Confidence 4778888754 448899886653 5899999999999999999999998 999999999999999999999999
Q ss_pred ccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCC-CcchhHhHHHHHHHHHHhCCCCCC
Q 003481 614 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL-TPKSDSYSFGLIILQLLTGRLPVG 676 (816)
Q Consensus 614 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~ksDVwSlGviL~elltG~~Pf~ 676 (816)
|.|.....+. ....+||.+|.|||++.+.+| +..-|||++|++||.++....||.
T Consensus 715 gsaa~~ksgp--------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGP--------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCC--------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998876554 245689999999999998876 567899999999999999999984
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-26 Score=229.33 Aligned_cols=237 Identities=24% Similarity=0.356 Sum_probs=178.8
Q ss_pred cCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEecc-c--cCCccceee
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGA-C--PEAWSLVYE 543 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~-~--~~~~~lV~E 543 (816)
+.|.+.+.||+|.||.+.++.+. .+.+++|.+... .....+|.+|...--.| .|.||+.-|.. | .+.+++++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 45888899999999999999997 578999987643 34567899998776566 59999998865 4 234678999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEe-cCC-CCeeEeecccceeccC
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL-DSE-LSSKICDFGICRLVTE 621 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl-~~~-~~vkL~DFGla~~~~~ 621 (816)
|++.|+|..-+... .+-+....+++.|+++||.|+|+.+ +||||||.+|||| +.+ ..+||||||+.+....
T Consensus 103 ~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred cCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999877543 3667788999999999999999988 9999999999999 333 4799999999876543
Q ss_pred CCCcCCCccccCCCCCCCCCCCcccccc---C--CCCcchhHhHHHHHHHHHHhCCCCCCChH------HHHHHhhcCcc
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRT---G--VLTPKSDSYSFGLIILQLLTGRLPVGLAG------EVRRAVSCGKL 690 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~--~~s~ksDVwSlGviL~elltG~~Pf~~~~------~~~~~~~~~~~ 690 (816)
.. ....-+..|.+||.... + ...+.+|||.||+++|.++||.+||.... +-+..+..+..
T Consensus 176 tV---------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 176 TV---------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN 246 (378)
T ss_pred ee---------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC
Confidence 22 23345677999996543 2 35689999999999999999999996211 12333444433
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 691 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 691 ~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
..+ +..-...++.+..+.++-|..+|++|=-+.
T Consensus 247 ~~~-----P~~F~~fs~~a~r~Fkk~lt~~~~drcki~ 279 (378)
T KOG1345|consen 247 PAL-----PKKFNPFSEKALRLFKKSLTPRFKDRCKIW 279 (378)
T ss_pred ccC-----chhhcccCHHHHHHHHHhcCCcccccchhH
Confidence 322 111122556788888999999999994333
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=1.6e-25 Score=237.27 Aligned_cols=260 Identities=24% Similarity=0.348 Sum_probs=192.7
Q ss_pred HHHHhcCCCccceeeeecceEEEEEEEc-----CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccc--cC
Q 003481 465 LQTATCNFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGAC--PE 536 (816)
Q Consensus 465 l~~~t~~f~~~~~LG~G~~g~Vy~~~~~-----g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~--~~ 536 (816)
+....+.|...++||.|.|++||++.+. ...||+|.+.... ....+.+|+++|..+ -+.||+++.+++ .+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3345567889999999999999999764 5689999986543 334688999999999 599999999998 45
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-CCeeEeeccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGI 615 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkL~DFGl 615 (816)
...+|+||++.....+++. .++..++..+++.++.||.++|.+| ||||||||+|+|.+.. +.-.|+|||+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eeEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 6899999999998888874 3667889999999999999999988 9999999999999754 6789999999
Q ss_pred ceeccCCC------C-----cC-----------------C-C---------ccccCCCCCCCCCCCccccc-cCCCCcch
Q 003481 616 CRLVTEDT------L-----YL-----------------P-S---------FHRSTAPKGSFPYADPEYHR-TGVLTPKS 656 (816)
Q Consensus 616 a~~~~~~~------~-----~~-----------------~-~---------~~~~~~~~gt~~Y~aPE~~~-~~~~s~ks 656 (816)
|....... . .. + . .......+||++|.|||++. ...-++++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 98211000 0 00 0 0 00112457999999999775 45678999
Q ss_pred hHhHHHHHHHHHHhCCCCCCCh----------------HHHHH-HhhcCc--ccc----------------c----cCC-
Q 003481 657 DSYSFGLIILQLLTGRLPVGLA----------------GEVRR-AVSCGK--LSS----------------I----LDP- 696 (816)
Q Consensus 657 DVwSlGviL~elltG~~Pf~~~----------------~~~~~-~~~~~~--~~~----------------~----~d~- 696 (816)
||||.|||++-+++++.||... ..++. +...|. +.+ + +.+
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 9999999999999999998311 11111 111122 111 0 000
Q ss_pred -----CCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 697 -----LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 697 -----~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
....+.+..+..+.+|+.+|+..||.+|.++.++|.+.+
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpF 383 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPF 383 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcC
Confidence 011233344558899999999999999999998776543
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=2.4e-25 Score=272.21 Aligned_cols=201 Identities=17% Similarity=0.136 Sum_probs=141.1
Q ss_pred cCCC-CceeeEecccc---------CCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCce
Q 003481 521 KLQH-PHLVTLLGACP---------EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 590 (816)
Q Consensus 521 ~l~H-pnIv~l~g~~~---------~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~i 590 (816)
.++| +||+.++++|. +..++++||+ +++|.++|.... ..+++.+++.|+.||+.||.|||+.+ |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~g---I 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQG---I 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 4556 68888888771 1356778887 669999996532 45899999999999999999999987 9
Q ss_pred eeCCCCCCceEecCC-------------------CCeeEeecccceeccCCCC----c------CCCccccCCCCCCCCC
Q 003481 591 VHGDLKPQNILLDSE-------------------LSSKICDFGICRLVTEDTL----Y------LPSFHRSTAPKGSFPY 641 (816)
Q Consensus 591 vHrDIkp~NILl~~~-------------------~~vkL~DFGla~~~~~~~~----~------~~~~~~~~~~~gt~~Y 641 (816)
+||||||+||||+.. +.+||+|||+++....... . .+.........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999654 4455666666553211000 0 0000011224689999
Q ss_pred CCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCC
Q 003481 642 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYG 721 (816)
Q Consensus 642 ~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP 721 (816)
+|||++.+..++.++|||||||+||||++|.+|+.........+.... +.+. ..........++.+||+++|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~L~~~P 253 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRV----LPPQ----ILLNWPKEASFCLWLLHPEP 253 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhh----cChh----hhhcCHHHHHHHHHhCCCCh
Confidence 999999999999999999999999999999999764332222221111 1111 01122346788999999999
Q ss_pred CCCCCChHHHHHHH
Q 003481 722 RERPDITPSLVKEL 735 (816)
Q Consensus 722 ~~RPs~~e~l~~~L 735 (816)
.+||++.+++.+.+
T Consensus 254 ~~Rps~~eil~h~~ 267 (793)
T PLN00181 254 SCRPSMSELLQSEF 267 (793)
T ss_pred hhCcChHHHhhchh
Confidence 99999997765443
No 405
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=99.92 E-value=3.7e-24 Score=206.54 Aligned_cols=144 Identities=40% Similarity=0.618 Sum_probs=121.3
Q ss_pred EEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003481 24 KVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNYLR 102 (816)
Q Consensus 24 ~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 102 (816)
+||||||+| +.|.+||+||++++.. ++++++|||.+++.......+. .+....+....++.++++++++..
T Consensus 1 ~ILVavD~S-~~s~~al~~a~~~a~~~~~~l~ll~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~ 72 (146)
T cd01989 1 SVAVAVDKD-KKSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSGK-------LEVASAYKQEEDKEAKELLLPYRC 72 (146)
T ss_pred CEEEEecCc-cccHHHHHHHHHhccCCCCcEEEEEeccCcccCCCCccc-------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 599999995 4599999999999887 8999999999765432221110 122333445556788999999999
Q ss_pred HHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCC-cchhhhhhcCCCCceEEEEeCC
Q 003481 103 ICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGS-RKASYAAKNAPMFCEIWFVNKG 175 (816)
Q Consensus 103 ~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~g-sVs~~V~~~ap~~C~V~vv~~g 175 (816)
.|...+++++..++++++|+++|+++|+++++|+||||+||++++.|.++| ||+++|++++|++|+|+||++|
T Consensus 73 ~~~~~~~~~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~~l~~~~~gssva~~Vi~~a~~~c~Vlvv~~~ 146 (146)
T cd01989 73 FCSRKGVQCEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDNHFSMKFKKSDVASSVLKEAPDFCTVYVVSKG 146 (146)
T ss_pred HHhhcCCeEEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCCceeecccCCchhHHHHhcCCCCceEEEEeCc
Confidence 999999999999988888999999999999999999999999999999776 7999999999999999999998
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=4.8e-24 Score=212.09 Aligned_cols=162 Identities=23% Similarity=0.209 Sum_probs=124.1
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|+|.+++...+ ..++|..++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc----
Confidence 68999987543 46999999999999999999999964 999999999999999 99988764321
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHH---HHhhcCccccccCCCCCCCCHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR---RAVSCGKLSSILDPLAGDWPTF 704 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~ 704 (816)
..||+.|+|||++.+..++.++|||||||++|||+||+.||....... ..+..+... .++.....+..
T Consensus 64 -------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 134 (176)
T smart00750 64 -------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA--DDPRDRSNLES 134 (176)
T ss_pred -------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc--CCccccccHHH
Confidence 258999999999999999999999999999999999999996443221 111111111 11111112233
Q ss_pred HHH--HHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 705 VAR--RLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 705 ~~~--~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
... .+.+++.+||..+|.+||++.+.+.+..
T Consensus 135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 135 VSAARSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred HHhhhhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 444 6999999999999999999996554443
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=6.1e-23 Score=224.90 Aligned_cols=173 Identities=18% Similarity=0.182 Sum_probs=133.3
Q ss_pred HHHHHHhcCCCccceeeeecceEEEEEEEc---CeEEEEEEeccCC-----cccHHHHHHHHHHHhcCCCCceee-Eecc
Q 003481 463 ADLQTATCNFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHN-----MQGQLEFQQEVRVLSKLQHPHLVT-LLGA 533 (816)
Q Consensus 463 ~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~---g~~vAiK~l~~~~-----~~~~~~~~~E~~il~~l~HpnIv~-l~g~ 533 (816)
+.+....++|.....||+|+||.||+|.+. +..||||++.... ......|.+|+.+|.+++|+|+++ ++++
T Consensus 11 ~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~ 90 (365)
T PRK09188 11 DQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT 90 (365)
T ss_pred cccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence 345566778999999999999999999873 6778999875331 122456899999999999999985 5443
Q ss_pred ccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCC-CCCceEecCCCCeeEee
Q 003481 534 CPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDL-KPQNILLDSELSSKICD 612 (816)
Q Consensus 534 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDI-kp~NILl~~~~~vkL~D 612 (816)
+..+|||||++|++|.. +. . .. ...++.+++.||.|||+.+ |+|||| ||+|||++.++.+||+|
T Consensus 91 --~~~~LVmE~~~G~~L~~-~~-~-----~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHL-AR-P-----HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred --CCcEEEEEccCCCCHHH-hC-c-----cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEE
Confidence 45799999999999963 21 1 11 1467899999999999987 999999 99999999999999999
Q ss_pred cccceeccCCCCcCC--CccccCCCCCCCCCCCccccccC
Q 003481 613 FGICRLVTEDTLYLP--SFHRSTAPKGSFPYADPEYHRTG 650 (816)
Q Consensus 613 FGla~~~~~~~~~~~--~~~~~~~~~gt~~Y~aPE~~~~~ 650 (816)
||+|+.+........ ....-+...+++.|+|||++...
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999998765432110 01112466789999999988643
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=6.3e-22 Score=216.71 Aligned_cols=261 Identities=23% Similarity=0.270 Sum_probs=192.9
Q ss_pred CCCccceeeeecceEEEEEEEcC---eEEEEEEeccCCcccHHHHHHHHHHHhcCCC----CceeeEecccc-C--Cccc
Q 003481 471 NFSESFKVGQGGFGCVYKGEMLG---RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH----PHLVTLLGACP-E--AWSL 540 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~g---~~vAiK~l~~~~~~~~~~~~~E~~il~~l~H----pnIv~l~g~~~-~--~~~l 540 (816)
+|.+..+||+|+||.||.+.... ..+|+|+...........+..|+.++..+.. +++..+++... . ..++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 89999999999999999999863 4699998876544333367889999998863 57888877762 2 4789
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-----CCeeEeeccc
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-----LSSKICDFGI 615 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-----~~vkL~DFGl 615 (816)
||+.+ |.+|.++..... ...++..+.++|+.|++.+|.+||+.| ++||||||+|+++... ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 889999775554 467899999999999999999999988 9999999999999765 4699999999
Q ss_pred ce--eccCCCCc--CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH--HHHhhcCc
Q 003481 616 CR--LVTEDTLY--LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGK 689 (816)
Q Consensus 616 a~--~~~~~~~~--~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~--~~~~~~~~ 689 (816)
++ ........ .+.........||..|+++....+...+.+.|+||++.++.+++.|..||...... ...+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 99 33222211 11111123456999999999999999999999999999999999999999543321 11111111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhhc
Q 003481 690 LSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVA 741 (816)
Q Consensus 690 ~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~~ 741 (816)
....... .....+..+..+...+-..+...+|... .+...|......
T Consensus 254 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~-~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RKLLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDYE-KLAELLKDVFDS 300 (322)
T ss_pred hhhcccc----ccCCChHHHHHHHHHhhccCCcCCCCHH-HHHHHHHHHHHh
Confidence 1111111 1122334666666667779999999998 677777665543
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=8.7e-22 Score=202.10 Aligned_cols=258 Identities=21% Similarity=0.264 Sum_probs=195.3
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cccceee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYE 543 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~lV~E 543 (816)
.-+|.++++||+|+||.++.|+.. +.+||||.-...+. .-++..|.+..+.| ..++|...|.|-.+ ...||+|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 348999999999999999999874 89999998654432 23567788888887 57888888766554 4679999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-----CCeeEeeccccee
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-----LSSKICDFGICRL 618 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-----~~vkL~DFGla~~ 618 (816)
++ |-||+|++.-++ ..++.+.++.|+.|++.-++|+|+.. +|.|||||+|+||..- ..+.|+|||+|+.
T Consensus 105 LL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 99 889999887655 46889999999999999999999988 9999999999999643 3489999999998
Q ss_pred ccCCCCc-CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH-----HHHHhhcCcccc
Q 003481 619 VTEDTLY-LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-----VRRAVSCGKLSS 692 (816)
Q Consensus 619 ~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~-----~~~~~~~~~~~~ 692 (816)
+.+.... ...+.......||..||+--...+..-+...|.-|||-++++.|-|..||..... -.+.+...+-..
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 7654322 1233455677899999999998899999999999999999999999999974332 112222112111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 693 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 693 ~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
.+..++..+| .++..-+.-.-..+-.+-|+.. -+...+..+.
T Consensus 259 ~i~~Lc~g~P----~efa~Yl~yvR~L~F~E~PDYd-ylr~Lf~dvl 300 (449)
T KOG1165|consen 259 PIEVLCEGFP----EEFATYLRYVRRLDFFETPDYD-YLRKLFDDVL 300 (449)
T ss_pred CHHHHHhcCH----HHHHHHHHHHHhcCcccCCCHH-HHHHHHHHHH
Confidence 1222223344 4556666667778888999987 6666665543
No 410
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=6.3e-23 Score=204.63 Aligned_cols=253 Identities=24% Similarity=0.415 Sum_probs=194.6
Q ss_pred cCHHHHHHHhcCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC-
Q 003481 460 FSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE- 536 (816)
Q Consensus 460 ~~~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~--~~~~~~E~~il~~l~HpnIv~l~g~~~~- 536 (816)
+++.+|...| +|.....|..|+|++.|..++.|++.-..... ...|..|.-.|+-+.||||+.++|.|..
T Consensus 187 id~~~lnl~t-------kl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp 259 (448)
T KOG0195|consen 187 IDVSSLNLIT-------KLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP 259 (448)
T ss_pred cchhhhhhhh-------hhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC
Confidence 4555555444 58999999999999999999999987654332 3468999999999999999999999954
Q ss_pred -CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccc
Q 003481 537 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 615 (816)
Q Consensus 537 -~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGl 615 (816)
++.++..||+.|+|...|+...+ -.++-.+..+++.++++|++|||+..| -|.---|.+..+++|++.+++|+- +-
T Consensus 260 pnlv~isq~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltarism-ad 336 (448)
T KOG0195|consen 260 PNLVIISQYMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARISM-AD 336 (448)
T ss_pred CCceEeeeeccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhheec-cc
Confidence 57789999999999999987654 235667899999999999999999883 233446899999999999888752 11
Q ss_pred ceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCC---cchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCcccc
Q 003481 616 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT---PKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSS 692 (816)
Q Consensus 616 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s---~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~ 692 (816)
+++. + ......-.|.||+||.++..+-+ .++|+|||.++||||.|...||........ |. .-
T Consensus 337 ~kfs---------f-qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec----gm-ki 401 (448)
T KOG0195|consen 337 TKFS---------F-QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC----GM-KI 401 (448)
T ss_pred ceee---------e-eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh----hh-hh
Confidence 1110 0 11233457899999998876543 489999999999999999999975554322 11 11
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 693 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 693 ~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.+.......|+..+..+.+|+.-|+..||.+||.+. .++..|+.+
T Consensus 402 aleglrv~ippgis~hm~klm~icmnedpgkrpkfd-mivpilekm 446 (448)
T KOG0195|consen 402 ALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFD-MIVPILEKM 446 (448)
T ss_pred hhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcc-eehhhHHHh
Confidence 123334456788899999999999999999999998 677777764
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=8.1e-21 Score=204.31 Aligned_cols=260 Identities=29% Similarity=0.410 Sum_probs=197.6
Q ss_pred CCccceeeeecceEEEEEEEcCeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCC-ceeeEeccccCC--ccceeecc
Q 003481 472 FSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHP-HLVTLLGACPEA--WSLVYEYL 545 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~---~~~~~~E~~il~~l~Hp-nIv~l~g~~~~~--~~lV~E~~ 545 (816)
|.....||.|+||.||++.+. ..+++|.+....... ...|.+|+.++..+.|+ +|+++++++... .+++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 566778999999999999988 889999987765443 56799999999999988 799999988443 58999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC-CeeEeecccceeccCCCC
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLVTEDTL 624 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~-~vkL~DFGla~~~~~~~~ 624 (816)
.+++|.+++........++......++.|++.++.|+|..+ ++||||||+||+++..+ .++++|||+++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 99999966654321125788999999999999999999988 99999999999999988 699999999986654332
Q ss_pred cCCCccccCCCCCCCCCCCcccccc---CCCCcchhHhHHHHHHHHHHhCCCCCCChH------HHHHHhhcCccccccC
Q 003481 625 YLPSFHRSTAPKGSFPYADPEYHRT---GVLTPKSDSYSFGLIILQLLTGRLPVGLAG------EVRRAVSCGKLSSILD 695 (816)
Q Consensus 625 ~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~ksDVwSlGviL~elltG~~Pf~~~~------~~~~~~~~~~~~~~~d 695 (816)
............||..|++||.+.. ..++...|+||+|++++++++|..||.... .....+..........
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccc
Confidence 1100012466789999999999887 578999999999999999999999986543 2222222221110000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
......+......+.+++..|+..+|..|.+........+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 277 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDL 277 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchH
Confidence 1111111223457899999999999999999986555533
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-21 Score=192.20 Aligned_cols=259 Identities=23% Similarity=0.277 Sum_probs=199.2
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCC-CceeeEecccc--CCccceee
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH-PHLVTLLGACP--EAWSLVYE 543 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~g~~~--~~~~lV~E 543 (816)
.++|...++||.|+||.+|.|... |..||||+-+..... .++..|..+...|++ ..|..+..+.. +...+||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 467999999999999999999874 899999997655433 346678899999975 45555555553 34779999
Q ss_pred ccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC---CCeeEeecccceecc
Q 003481 544 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVT 620 (816)
Q Consensus 544 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~---~~vkL~DFGla~~~~ 620 (816)
.+ |.||++++.-.. ..++..+++-++-|++.-++|+|..+ +|||||||+|+|..-+ ..+.|+|||+|+.+.
T Consensus 92 LL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred cc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhc
Confidence 99 889999887665 36888999999999999999999988 9999999999999643 458999999999875
Q ss_pred CCCCc-CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHH-----HHHhhcCcccccc
Q 003481 621 EDTLY-LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV-----RRAVSCGKLSSIL 694 (816)
Q Consensus 621 ~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~-----~~~~~~~~~~~~~ 694 (816)
+.... ...+.......||..|.+--...+...+...|+-|+|.+|.++.-|..||...... ...+...++...+
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 43221 11334556778999999988887777889999999999999999999999754432 2233333444333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhhh
Q 003481 695 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 740 (816)
Q Consensus 695 d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~~ 740 (816)
...+..+|. ++.-.+.-|-...-++-|+.. -|.+.+.-|..
T Consensus 246 e~LC~G~P~----EF~myl~Y~R~L~F~E~Pdy~-ylrqlFriLfr 286 (341)
T KOG1163|consen 246 EVLCKGFPA----EFAMYLNYCRGLGFEEKPDYM-YLRQLFRILFR 286 (341)
T ss_pred HHHhCCCcH----HHHHHHHHHhhcCCCCCCcHH-HHHHHHHHHHh
Confidence 334445554 667778889999999999987 66666665543
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=9.7e-21 Score=193.51 Aligned_cols=169 Identities=14% Similarity=0.089 Sum_probs=134.0
Q ss_pred HhcCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHH---------HHHHHHHHhcCCCCceeeEecccc---
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLE---------FQQEVRVLSKLQHPHLVTLLGACP--- 535 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~---------~~~E~~il~~l~HpnIv~l~g~~~--- 535 (816)
..++|...+.||.|+||.||+....+..+|||++.......... +.+|+..+.++.||+|..+..++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 46889999999999999999987778899999997665443332 679999999999999999887742
Q ss_pred -------CCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 536 -------EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 536 -------~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
...+|||||++|.+|.++.. ++. ....+++.+|..||..+ ++||||||+||+++.+| +
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-E
Confidence 23789999999999988631 222 34569999999999988 99999999999999988 9
Q ss_pred eEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHH
Q 003481 609 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 669 (816)
Q Consensus 609 kL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ell 669 (816)
+|+|||........... .-++....|..++|+|+||+++..+.
T Consensus 174 ~liDfg~~~~~~e~~a~------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999987655322210 01444455778999999999987664
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=5.4e-20 Score=185.43 Aligned_cols=138 Identities=19% Similarity=0.247 Sum_probs=107.4
Q ss_pred cceeeeecceEEEEEEEc-CeEEEEEEeccCCcc--c-------HHHH-----------------HHHHHHHhcCCCCce
Q 003481 475 SFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ--G-------QLEF-----------------QQEVRVLSKLQHPHL 527 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~--~-------~~~~-----------------~~E~~il~~l~HpnI 527 (816)
...||+|+||.||+|.+. |+.||||+++..... . ...| ..|+.+|.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 357999999999999885 899999999765321 1 1122 349999999987776
Q ss_pred eeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceeeCCCCCCceEecCCC
Q 003481 528 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL-HSSKPEKIVHGDLKPQNILLDSEL 606 (816)
Q Consensus 528 v~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yL-H~~~~~~ivHrDIkp~NILl~~~~ 606 (816)
.....+.....+|||||+++++|...+... ..+++.....++.|++.+|.|| |+.+ |+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILLKSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEecCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CC
Confidence 433332233458999999988776553322 3588899999999999999999 6877 99999999999998 47
Q ss_pred CeeEeecccceec
Q 003481 607 SSKICDFGICRLV 619 (816)
Q Consensus 607 ~vkL~DFGla~~~ 619 (816)
.++|+|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999998754
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=1.4e-20 Score=218.05 Aligned_cols=246 Identities=24% Similarity=0.264 Sum_probs=177.0
Q ss_pred CCCccceeeeecceEEEEEEEcCeEEEEEEeccCCc-ccHHHHHH---HHHHHhcCCCCceeeEeccc--cCCccceeec
Q 003481 471 NFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNM-QGQLEFQQ---EVRVLSKLQHPHLVTLLGAC--PEAWSLVYEY 544 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~-~~~~~~~~---E~~il~~l~HpnIv~l~g~~--~~~~~lV~E~ 544 (816)
+|...+.||.+.|=+|.+|+++...|+||++.+... -....|.+ |++ ...++|||++++.-+- ....|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 677778899999999999999866799999976653 23334443 444 4556999999987664 3347899999
Q ss_pred cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee--ccCC
Q 003481 545 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL--VTED 622 (816)
Q Consensus 545 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~--~~~~ 622 (816)
+.. +|.|.|..+ +.|..-+...|+.|++.||.-+|..+ |+|||||.+||||+.-.-+.|+||..-+. ++.+
T Consensus 103 vkh-nLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 103 VKH-NLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred Hhh-hhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 954 899988543 34666778889999999999999988 99999999999999988899999976543 2333
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc----------CC-CCcchhHhHHHHHHHHHHh-CCCCCCChHHHHHHhhcCcc
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRT----------GV-LTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKL 690 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~----------~~-~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~ 690 (816)
......+...+.. .-.+|+|||.|.. .. ++++.||||+||++.||++ |++||....-. .++.|.
T Consensus 176 NPadf~fFFDTSr-RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~--aYr~~~- 251 (1431)
T KOG1240|consen 176 NPADFTFFFDTSR-RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLL--AYRSGN- 251 (1431)
T ss_pred CcccceEEEecCC-ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHH--hHhccC-
Confidence 3222233333333 3457999997643 12 7889999999999999999 78888644322 122221
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 691 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 691 ~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
........... ....+.+|++.|++.||.+|-++.+.|
T Consensus 252 ~~~~e~~Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL 289 (1431)
T KOG1240|consen 252 ADDPEQLLEKI---EDVSLRNLILSMIQRDPSKRLSAEDYL 289 (1431)
T ss_pred ccCHHHHHHhC---cCccHHHHHHHHHccCchhccCHHHHH
Confidence 10000001111 123689999999999999999998433
No 416
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=2.2e-20 Score=217.79 Aligned_cols=250 Identities=22% Similarity=0.267 Sum_probs=179.5
Q ss_pred CccceeeeecceEEEEEEEc--CeEEEEEEeccC--Cccc----HHHHHHHHHHHhcCCCCceeeEeccccC--Ccccee
Q 003481 473 SESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH--NMQG----QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 542 (816)
Q Consensus 473 ~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~--~~~~----~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~ 542 (816)
.....+|.|.+|.|+..... ...++.|.+... .... ...+..|+-+-..+.|||++..+..+.+ ..+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34568999999988777553 333444433211 1111 1125567777888899999887766633 233459
Q ss_pred eccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCC
Q 003481 543 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 622 (816)
Q Consensus 543 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~ 622 (816)
|||++ +|..++.... .+.-.++..++.|++.|+.|||..| |.||||||+|++++.+|.+||+|||.+..+.-.
T Consensus 401 E~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 9999887652 4667888999999999999999998 999999999999999999999999999876533
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCc-chhHhHHHHHHHHHHhCCCCCCChHHHHHHh--hcCccccccCCCCC
Q 003481 623 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTP-KSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--SCGKLSSILDPLAG 699 (816)
Q Consensus 623 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~-ksDVwSlGviL~elltG~~Pf~~~~~~~~~~--~~~~~~~~~d~~~~ 699 (816)
... .........|+..|+|||++.+..|.+ ..||||.|++++.|++|+.||.....-.... ..+.....+.....
T Consensus 474 ~e~--~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~ 551 (601)
T KOG0590|consen 474 WEK--NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN 551 (601)
T ss_pred cch--hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH
Confidence 211 123456788999999999999998876 6999999999999999999996443321110 00100000000011
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCChHHH
Q 003481 700 DWPTFVARRLVDLGLQCCELYGRERPDITPSL 731 (816)
Q Consensus 700 ~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l 731 (816)
..-...+.....++.++|+++|.+|.++.+++
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~ 583 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQIL 583 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHh
Confidence 11234566789999999999999999999544
No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=1.3e-19 Score=181.46 Aligned_cols=189 Identities=17% Similarity=0.101 Sum_probs=142.1
Q ss_pred CccceeeeecceEEEEEEEcCeEEEEEEeccCCccc----HHHHHHHHHHHhcCC-CCceeeEeccccCCccceeeccCC
Q 003481 473 SESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQ-HPHLVTLLGACPEAWSLVYEYLPN 547 (816)
Q Consensus 473 ~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~----~~~~~~E~~il~~l~-HpnIv~l~g~~~~~~~lV~E~~~~ 547 (816)
.+...|++|+||+||.+...+.+++.+.+.....-. ...|.+|+++|.+|. |+++++++++ +..+++|+|+.|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G 82 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAG 82 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecC
Confidence 345679999999999888888999988876554311 124789999999995 5889999886 457999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCC-CCCceEecCCCCeeEeecccceeccCCCCcC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDL-KPQNILLDSELSSKICDFGICRLVTEDTLYL 626 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDI-kp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 626 (816)
.+|...+.. ....++.|++.+|.++|..+ |+|||| ||+|||++.++.++|+|||+|..........
T Consensus 83 ~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 83 AAMYQRPPR----------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ccHHhhhhh----------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 998654311 12457889999999999988 999999 7999999999999999999998655432100
Q ss_pred CCcc-------ccCCCCCCCCCCCccccccC-CCC-cchhHhHHHHHHHHHHhCCCCCC
Q 003481 627 PSFH-------RSTAPKGSFPYADPEYHRTG-VLT-PKSDSYSFGLIILQLLTGRLPVG 676 (816)
Q Consensus 627 ~~~~-------~~~~~~gt~~Y~aPE~~~~~-~~s-~ksDVwSlGviL~elltG~~Pf~ 676 (816)
.... .......++.|++|+...-- ..+ ...++++-|+.+|.++||..|.-
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 0000 00112368889999844321 233 67899999999999999998863
No 418
>PRK15456 universal stress protein UspG; Provisional
Probab=99.80 E-value=3.9e-19 Score=170.73 Aligned_cols=139 Identities=12% Similarity=0.128 Sum_probs=106.7
Q ss_pred cEEEEEecCCc-ccchhhHHHHhhccCCCCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 003481 23 EKVYVALGKCV-EKGLSLLHWTLQRFGSSREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNYL 101 (816)
Q Consensus 23 ~~VlVavD~s~-~~s~~Al~wal~~~~~~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 101 (816)
++||||||+|. +.|.+|++||+......+.+++|||.++...... .... .....+.+...+..++.++++.
T Consensus 3 ~~ILv~vD~S~~~~s~~al~~A~~la~~~~~l~llhv~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~l~~~~ 74 (142)
T PRK15456 3 KTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSL--HRFA------ADVRRFEEHLQHEAEERLQTMV 74 (142)
T ss_pred ccEEEeccCCchhHHHHHHHHHHHHHhcCCeEEEEEEecCcccccc--cccc------cchhhHHHHHHHHHHHHHHHHH
Confidence 68999999963 4589999999986554568999999976432111 1000 0112233444566777788887
Q ss_pred HHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEe
Q 003481 102 RICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 173 (816)
Q Consensus 102 ~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~ 173 (816)
......+++++..+.+| ++++.|+++|+++++|+||||+||++ +.+.++||++++|+++++ |+|+||+
T Consensus 75 ~~~~~~~~~v~~~v~~G-~~~~~I~~~a~~~~~DLIVmG~~g~~-~~~~llGS~a~~v~~~a~--~pVLvV~ 142 (142)
T PRK15456 75 SHFTIDPSRIKQHVRFG-SVRDEVNELAEELGADVVVIGSRNPS-ISTHLLGSNASSVIRHAN--LPVLVVR 142 (142)
T ss_pred HHhCCCCcceEEEEcCC-ChHHHHHHHHhhcCCCEEEEcCCCCC-ccceecCccHHHHHHcCC--CCEEEeC
Confidence 77766678888877665 67899999999999999999999976 888899999999999999 9999984
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.5e-19 Score=179.04 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=110.7
Q ss_pred cceeeeecceEEEEEEEc-CeEEEEEEeccCCccc--------------------------HHHHHHHHHHHhcCCCCce
Q 003481 475 SFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG--------------------------QLEFQQEVRVLSKLQHPHL 527 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~--------------------------~~~~~~E~~il~~l~HpnI 527 (816)
...||+|+||.||+|.+. |+.||||+++...... ...+..|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 457999999999999885 9999999997653210 1124578999999999987
Q ss_pred eeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceeeCCCCCCceEecCCC
Q 003481 528 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSEL 606 (816)
Q Consensus 528 v~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~ivHrDIkp~NILl~~~~ 606 (816)
.....+.....+|||||++|+++....... ..++......|+.+++.+|.+||+ .+ |+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLKKNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEecCCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CC
Confidence 544333333468999999988654432222 246778899999999999999999 77 99999999999999 88
Q ss_pred CeeEeecccceeccC
Q 003481 607 SSKICDFGICRLVTE 621 (816)
Q Consensus 607 ~vkL~DFGla~~~~~ 621 (816)
.++|+|||++.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999987654
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.78 E-value=2.6e-20 Score=207.18 Aligned_cols=222 Identities=27% Similarity=0.340 Sum_probs=180.4
Q ss_pred eeeecceEEEEEE-----EcCeEEEEEEeccCCccc--HHHHHHHHHHHhcCC-CCceeeEecccc--CCccceeeccCC
Q 003481 478 VGQGGFGCVYKGE-----MLGRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVYEYLPN 547 (816)
Q Consensus 478 LG~G~~g~Vy~~~-----~~g~~vAiK~l~~~~~~~--~~~~~~E~~il~~l~-HpnIv~l~g~~~--~~~~lV~E~~~~ 547 (816)
+|.|.||.|++++ +.|..+|+|++++..... ......|..++..++ ||.+|++...+. ...+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 7999999999753 347889999987664321 114567888999996 999999998873 468999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCC
Q 003481 548 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 627 (816)
Q Consensus 548 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 627 (816)
|.|...+.... .++......+...++-++.++|+.+ |+|||+|++||+++.+|++++.|||+++..-...
T Consensus 82 g~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 82 GDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred chhhhccccCC---chHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 99988876554 3566777788899999999999998 9999999999999999999999999998875433
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 003481 628 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 707 (816)
Q Consensus 628 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 707 (816)
..+||..|||||++. ....+.|+||||++++||+||..||.. ++...+.. .....|.+.+.
T Consensus 152 ------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~~~~~Il~---------~~~~~p~~l~~ 212 (612)
T KOG0603|consen 152 ------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--DTMKRILK---------AELEMPRELSA 212 (612)
T ss_pred ------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--HHHHHHhh---------hccCCchhhhH
Confidence 127999999999998 578899999999999999999999975 22222211 12345778888
Q ss_pred HHHHHHHHhhccCCCCCCCCh
Q 003481 708 RLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 708 ~l~~Li~~cl~~dP~~RPs~~ 728 (816)
....++..++..+|..|--..
T Consensus 213 ~a~~~~~~l~~r~p~nrLg~~ 233 (612)
T KOG0603|consen 213 EARSLFRQLFKRNPENRLGAG 233 (612)
T ss_pred HHHHHHHHHHhhCHHHHhccC
Confidence 899999999999999997764
No 421
>PRK15005 universal stress protein F; Provisional
Probab=99.78 E-value=1.6e-18 Score=166.68 Aligned_cols=140 Identities=13% Similarity=0.185 Sum_probs=104.1
Q ss_pred cEEEEEecCCccc-chhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 003481 23 EKVYVALGKCVEK-GLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNY 100 (816)
Q Consensus 23 ~~VlVavD~s~~~-s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 100 (816)
++||||||+|.++ +.+|++||++.+.. +++|++|||.++.+..... + ..... .... .....+.+++.++.+
T Consensus 3 ~~ILv~~D~s~~~~~~~a~~~a~~la~~~~~~l~ll~v~~~~~~~~~~-~-~~~~~-~~~~----~~~~~~~~~~~l~~~ 75 (144)
T PRK15005 3 RTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASL-G-LAYSA-ELPA----MDDLKAEAKSQLEEI 75 (144)
T ss_pred ccEEEecCCCchhHHHHHHHHHHHHHhccCCeEEEEEEEccCcccccc-c-ccccc-cchH----HHHHHHHHHHHHHHH
Confidence 6899999996553 57899999998876 8999999999764322111 1 10000 0001 112234455666666
Q ss_pred HHHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEe
Q 003481 101 LRICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 173 (816)
Q Consensus 101 ~~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~ 173 (816)
...+...+++++..+..| ++++.|+++|+++++|+||||+| ++++.|.++||++.+|++++| |+|+||.
T Consensus 76 ~~~~~~~~~~~~~~v~~G-~p~~~I~~~a~~~~~DLIV~Gs~-~~~~~~~llGS~a~~vl~~a~--cpVlvVr 144 (144)
T PRK15005 76 IKKFKLPTDRVHVHVEEG-SPKDRILELAKKIPADMIIIASH-RPDITTYLLGSNAAAVVRHAE--CSVLVVR 144 (144)
T ss_pred HHHhCCCCCceEEEEeCC-CHHHHHHHHHHHcCCCEEEEeCC-CCCchheeecchHHHHHHhCC--CCEEEeC
Confidence 666666778888877665 67899999999999999999999 467999999999999999999 9999984
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.78 E-value=1.1e-18 Score=183.53 Aligned_cols=229 Identities=22% Similarity=0.318 Sum_probs=148.8
Q ss_pred CCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCC---C-------ce------eeE
Q 003481 472 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQH---P-------HL------VTL 530 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~H---p-------nI------v~l 530 (816)
+.....||.|+++.||.+++. |+.+|+|++..... ...+.+.+|.-....+.+ | .+ +++
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 445678999999999999996 69999999865442 234567777655555432 1 11 111
Q ss_pred ec---cc---c--C-----CccceeeccCCCchhhhhh---hcCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeC
Q 003481 531 LG---AC---P--E-----AWSLVYEYLPNGSLQDRLF---RKSNV-SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 593 (816)
Q Consensus 531 ~g---~~---~--~-----~~~lV~E~~~~gsL~~~l~---~~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHr 593 (816)
-+ ++ . . +.+++|+-+ .++|.+++. ..... ..+....++.+..|+++.+++||..| ++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEec
Confidence 11 01 0 0 235788877 568877653 22221 23445556778899999999999988 9999
Q ss_pred CCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc--------CCCCcchhHhHHHHHH
Q 003481 594 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--------GVLTPKSDSYSFGLII 665 (816)
Q Consensus 594 DIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~s~ksDVwSlGviL 665 (816)
||+|+|+|++.+|.+.|+||+.......... . ...+..|.+||.... -.++.+.|.|+||+++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~--------~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYR--------C-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEE--------G-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceee--------c-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 9999999999999999999998776543221 1 234578999996633 2578899999999999
Q ss_pred HHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCC
Q 003481 666 LQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRER 724 (816)
Q Consensus 666 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~R 724 (816)
|.|++|..||+....... . +.....+. ..++.+..||..+|+.||.+|
T Consensus 241 y~lWC~~lPf~~~~~~~~------~----~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEAD------P----EWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGST------S----GGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCcccc------c----cccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999999999975432100 0 00122344 678899999999999999988
No 423
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.8e-18 Score=179.93 Aligned_cols=201 Identities=21% Similarity=0.278 Sum_probs=146.3
Q ss_pred CCCceeeEeccccCC-----------------------------ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHH
Q 003481 523 QHPHLVTLLGACPEA-----------------------------WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 573 (816)
Q Consensus 523 ~HpnIv~l~g~~~~~-----------------------------~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 573 (816)
+|||||++.++|.+. .|+||...+ .+|..++.... .+.....-|+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC----CchHHHHHHHH
Confidence 599999999876221 467887774 48888886543 45566778899
Q ss_pred HHHHHHHHHhhcCCCceeeCCCCCCceEe--cCCC--CeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc
Q 003481 574 EIASGLCFLHSSKPEKIVHGDLKPQNILL--DSEL--SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 649 (816)
Q Consensus 574 qia~aL~yLH~~~~~~ivHrDIkp~NILl--~~~~--~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 649 (816)
|++.|+.|||.++ |.|||+|++|||| |+++ .+.|+|||++--........+-........|+..-||||++..
T Consensus 349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999998 9999999999999 4443 4789999998654443333332233445678889999998865
Q ss_pred CCC------CcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCC
Q 003481 650 GVL------TPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRE 723 (816)
Q Consensus 650 ~~~------s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~ 723 (816)
.+- -.|+|.|+.|.+.||+++...||...++.. +....++ ....+..|..++..+.+|+...|+.||.+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~--L~~r~Yq---e~qLPalp~~vpp~~rqlV~~lL~r~psk 500 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML--LDTRTYQ---ESQLPALPSRVPPVARQLVFDLLKRDPSK 500 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe--echhhhh---hhhCCCCcccCChHHHHHHHHHhcCCccc
Confidence 321 138999999999999999999997544321 1111111 11223456667788999999999999999
Q ss_pred CCCChHHHHHHHHH
Q 003481 724 RPDITPSLVKELEQ 737 (816)
Q Consensus 724 RPs~~e~l~~~Le~ 737 (816)
||+.. +...+|+-
T Consensus 501 Rvsp~-iAANvl~L 513 (598)
T KOG4158|consen 501 RVSPN-IAANVLNL 513 (598)
T ss_pred cCCcc-HHHhHHHH
Confidence 99987 66666653
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=7.1e-18 Score=171.84 Aligned_cols=134 Identities=22% Similarity=0.285 Sum_probs=104.4
Q ss_pred CccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcC-----CCCceeeEeccccCC-----cc-ce
Q 003481 473 SESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-----QHPHLVTLLGACPEA-----WS-LV 541 (816)
Q Consensus 473 ~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~g~~~~~-----~~-lV 541 (816)
.....||+|+||.||.....+.. +||++..........+.+|+.++..+ .||||++++|++... .+ +|
T Consensus 5 ~~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 5 SEQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CCcceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 34568999999999963223444 69998766555567799999999999 579999999998553 12 68
Q ss_pred eec--cCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhhcCCCceeeCCCCCCceEecC----CCCeeEeecc
Q 003481 542 YEY--LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGL-CFLHSSKPEKIVHGDLKPQNILLDS----ELSSKICDFG 614 (816)
Q Consensus 542 ~E~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL-~yLH~~~~~~ivHrDIkp~NILl~~----~~~vkL~DFG 614 (816)
+|| +.+|+|.+++.+. .+++. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||+
T Consensus 84 ~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred ecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 999 5579999999553 24444 45678888888 9999988 999999999999974 3479999954
Q ss_pred cc
Q 003481 615 IC 616 (816)
Q Consensus 615 la 616 (816)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 425
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=99.74 E-value=1.7e-17 Score=155.30 Aligned_cols=122 Identities=16% Similarity=0.231 Sum_probs=101.8
Q ss_pred EEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003481 24 KVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNYLR 102 (816)
Q Consensus 24 ~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 102 (816)
+||||||++ +.+++|++||++.... +..+++|||.++... .. .+..++.++.+..
T Consensus 1 ~Ilv~vd~s-~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~------~~-----------------~~~~~~~l~~~~~ 56 (124)
T cd01987 1 RILVCISGG-PNAERLIRRAARLADRLKAPWYVVYVETPRLN------RL-----------------SEAERRRLAEALR 56 (124)
T ss_pred CEEEEECCC-cchHHHHHHHHHHHHHhCCCEEEEEEecCccc------cC-----------------CHHHHHHHHHHHH
Confidence 599999995 5599999999998876 899999999974321 00 1334567788888
Q ss_pred HHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEE
Q 003481 103 ICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFV 172 (816)
Q Consensus 103 ~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv 172 (816)
.+++.++.+ .++.+++++++|+++++++++|+||||+++++.++|.++||++++|+++| ..|+||||
T Consensus 57 ~~~~~~~~~--~~~~~~~~~~~I~~~~~~~~~dllviG~~~~~~~~~~~~Gs~~~~v~~~a-~~~~v~v~ 123 (124)
T cd01987 57 LAEELGAEV--VTLPGDDVAEAIVEFAREHNVTQIVVGKSRRSRWRELFRGSLVDRLLRRA-GNIDVHIV 123 (124)
T ss_pred HHHHcCCEE--EEEeCCcHHHHHHHHHHHcCCCEEEeCCCCCchHHHHhcccHHHHHHHhC-CCCeEEEe
Confidence 888887754 34567789999999999999999999999999999999999999999999 34999997
No 426
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.73 E-value=5.1e-18 Score=189.38 Aligned_cols=210 Identities=30% Similarity=0.415 Sum_probs=155.9
Q ss_pred HhcCCCCceeeEeccccC--CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCC
Q 003481 519 LSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLK 596 (816)
Q Consensus 519 l~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIk 596 (816)
|+.+.|.|+.+++|.+.+ ..+.|.+||..|+|.|.+.... ..++|-....++.+|+.||.|||+.. -..|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeec
Confidence 457899999999999844 4788999999999999998744 46899999999999999999999965 13999999
Q ss_pred CCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccC-------CCCcchhHhHHHHHHHHHH
Q 003481 597 PQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-------VLTPKSDSYSFGLIILQLL 669 (816)
Q Consensus 597 p~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~s~ksDVwSlGviL~ell 669 (816)
+.|.++|..+.+||+|||+......... ........-...|.|||.+... ..+.+.||||||++++|++
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAE----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred cccceeeeeEEEEechhhhccccccccc----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 9999999999999999999877643110 0011222345679999988653 1467899999999999999
Q ss_pred hCCCCCCChH------HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHhh
Q 003481 670 TGRLPVGLAG------EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 670 tG~~Pf~~~~------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l~ 739 (816)
+.+.||.... ++...+..+ -...+.|...... ...+.+..++..||..+|..||++. .+...++.+.
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~~-~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~-~i~~~~~~~~ 225 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKKG-GSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIE-QIRSKLLTIN 225 (484)
T ss_pred hccCccccccccCChHHHHHHHHhc-CCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHH-HHHhhhhhhc
Confidence 9999996422 222223221 1111222211111 3444799999999999999999998 5555555443
No 427
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=99.73 E-value=1.8e-17 Score=159.44 Aligned_cols=136 Identities=10% Similarity=0.122 Sum_probs=95.2
Q ss_pred ccEEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 003481 22 GEKVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNY 100 (816)
Q Consensus 22 ~~~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 100 (816)
-++||||||+|.. |.+||+||++.+.. ++.|++|||..+.... . .+... .....+.+...+...+.+
T Consensus 3 ~~~ILvavD~S~~-s~~al~~a~~la~~~~a~l~ll~v~~~~~~~-~-~~~~~------~~~~~~~~~~~~~~~~~l--- 70 (144)
T PRK15118 3 YKHILIAVDLSPE-SKVLVEKAVSMARPYNAKVSLIHVDVNYSDL-Y-TGLID------VNLGDMQKRISEETHHAL--- 70 (144)
T ss_pred ceEEEEEccCChh-HHHHHHHHHHHHHhhCCEEEEEEEccChhhh-h-hhhhh------cchHHHHHHHHHHHHHHH---
Confidence 3689999999555 89999999998876 8899999995332111 1 01000 001112222222333333
Q ss_pred HHHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEeC
Q 003481 101 LRICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVNK 174 (816)
Q Consensus 101 ~~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~~ 174 (816)
..++.+.|+.+...++..++|+++|+++|+++++|+||||+|| +.+++ +||||++|+++|+ |+|+||..
T Consensus 71 ~~~~~~~~~~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~~-~~~~~--lgSva~~v~~~a~--~pVLvv~~ 139 (144)
T PRK15118 71 TELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQ-DFWSK--LMSSARQLINTVH--VDMLIVPL 139 (144)
T ss_pred HHHHHhCCCCceEEEEEecCHHHHHHHHHHHhCCCEEEEeCcc-cHHHH--HHHHHHHHHhhCC--CCEEEecC
Confidence 3445677888765555567889999999999999999999996 44444 4699999999999 99999963
No 428
>PRK09982 universal stress protein UspD; Provisional
Probab=99.72 E-value=2.8e-17 Score=157.86 Aligned_cols=134 Identities=13% Similarity=0.139 Sum_probs=99.3
Q ss_pred cEEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 003481 23 EKVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNYL 101 (816)
Q Consensus 23 ~~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 101 (816)
++||||||+|.. |.+||+||++.+.. +++|++|||.++.+.... +..++ ..+ ...+..++.+++.++++.
T Consensus 4 k~ILvavD~S~~-s~~al~~A~~lA~~~~a~l~llhV~~~~~~~~~-~~~~~----~~~---~~~~~~~~~~~~~l~~~~ 74 (142)
T PRK09982 4 KHIGVAISGNEE-DALLVNKALELARHNDAHLTLIHIDDGLSELYP-GIYFP----ATE---DILQLLKNKSDNKLYKLT 74 (142)
T ss_pred eEEEEEecCCcc-hHHHHHHHHHHHHHhCCeEEEEEEccCcchhch-hhhcc----chH---HHHHHHHHHHHHHHHHHH
Confidence 689999999554 89999999998876 899999999976432111 11010 011 122333455666777776
Q ss_pred HHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEe
Q 003481 102 RICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 173 (816)
Q Consensus 102 ~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~ 173 (816)
..+.. ..++..+.. ++|++.|+++|++.++|+||||+| +++++|.+ | |++.|++|++ |+|+||.
T Consensus 75 ~~~~~--~~~~~~v~~-G~p~~~I~~~A~~~~aDLIVmG~~-~~~~~~~~-~-va~~V~~~s~--~pVLvv~ 138 (142)
T PRK09982 75 KNIQW--PKTKLRIER-GEMPETLLEIMQKEQCDLLVCGHH-HSFINRLM-P-AYRGMINKMS--ADLLIVP 138 (142)
T ss_pred HhcCC--CcceEEEEe-cCHHHHHHHHHHHcCCCEEEEeCC-hhHHHHHH-H-HHHHHHhcCC--CCEEEec
Confidence 65532 345555544 578999999999999999999986 89999988 5 9999999999 9999995
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=2.7e-17 Score=195.40 Aligned_cols=198 Identities=23% Similarity=0.281 Sum_probs=156.4
Q ss_pred HHHHHHhcCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCC---CCceeeEecc--ccC
Q 003481 463 ADLQTATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ---HPHLVTLLGA--CPE 536 (816)
Q Consensus 463 ~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~---HpnIv~l~g~--~~~ 536 (816)
.+++.....|.+.+.||+|+||.||+|... |+.||||+-++.+... |.-=.+++.+|+ -+.|..+..+ |.+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 455556677899999999999999999875 8999999987765432 222234555565 2233333333 367
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC-------CCCee
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------ELSSK 609 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~-------~~~vk 609 (816)
..+||++|.+.|+|.+++.. ...++|..+..|+.|++..+..||..+ |||+||||+|+||.. +..++
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred cceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceE
Confidence 78999999999999999973 346899999999999999999999998 999999999999942 34599
Q ss_pred EeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCC
Q 003481 610 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL 673 (816)
Q Consensus 610 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~ 673 (816)
|+|||.+-.+..-. .........+|-++-.+|...+.+++...|.|.|..+++-||.|+.
T Consensus 842 lIDfG~siDm~lfp----~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFP----DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EEecccceeeeEcC----CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999987653211 1123456678999999999999999999999999999999999974
No 430
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=99.70 E-value=1.4e-16 Score=150.38 Aligned_cols=131 Identities=18% Similarity=0.215 Sum_probs=110.9
Q ss_pred EEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003481 24 KVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNYLR 102 (816)
Q Consensus 24 ~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 102 (816)
+||||||++ +.+..|++||...+.. +..|+++||.+++..... . ......+..++.++.+..
T Consensus 1 ~ILv~vd~s-~~~~~~l~~a~~la~~~~~~v~ll~v~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~ 63 (132)
T cd01988 1 RILVPVANP-NTARDLLELAAALARAQNGEIIPLNVIEVPNHSSP-------S---------QLEVNVQRARKLLRQAER 63 (132)
T ss_pred CEEEecCCc-hhHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCCc-------c---------hhHHHHHHHHHHHHHHHH
Confidence 599999995 5699999999998876 789999999986432211 0 011223567789999999
Q ss_pred HHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEe
Q 003481 103 ICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 173 (816)
Q Consensus 103 ~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~ 173 (816)
++.+.|++++..+..++++.++|+++++++++|+||||+++++.+.+.++||++++|+++++ |+|+||+
T Consensus 64 ~~~~~g~~~~~~~~~~~~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~~~lGs~~~~v~~~~~--~pvlvv~ 132 (132)
T cd01988 64 IAASLGVPVHTIIRIDHDIASGILRTAKERQADLIIMGWHGSTSLRDRLFGGVIDQVLESAP--CDVAVVK 132 (132)
T ss_pred HhhhcCCceEEEEEecCCHHHHHHHHHHhcCCCEEEEecCCCCCccceecCchHHHHHhcCC--CCEEEeC
Confidence 99999999998887777899999999999999999999999999988999999999999999 9999984
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=5.6e-18 Score=185.35 Aligned_cols=177 Identities=24% Similarity=0.304 Sum_probs=137.3
Q ss_pred CccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 537 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 537 ~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
.+|+.|++|...+|.++|.+.......+|...+.|+.|++.|+.| .+ .+|+|+||.||++..+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence 478999999999999999877777778999999999999999999 44 899999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHh-CCCCCCChHHHHHHhhcCccccccC
Q 003481 617 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILD 695 (816)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~d 695 (816)
..........+.....+...||..||+||.+.+..|+.|+||||||+||+||++ -..+|.-... ..-+..|.+...
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t-~~d~r~g~ip~~-- 480 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIAT-LTDIRDGIIPPE-- 480 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHh-hhhhhcCCCChH--
Confidence 887665533334445677889999999999999999999999999999999997 3333321111 111222222200
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
...++| .=..|+.+++.+.|.+||++.
T Consensus 481 -~~~d~p-----~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 481 -FLQDYP-----EEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred -HhhcCc-----HHHHHHHHhcCCCcccCchHH
Confidence 011222 335789999999999999443
No 432
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=1.3e-16 Score=163.68 Aligned_cols=132 Identities=24% Similarity=0.392 Sum_probs=110.4
Q ss_pred ceeeeecceEEEEEEEcCeEEEEEEeccCCccc--------HHHHHHHHHHHhcCCCCceeeEecc--ccCCccceeecc
Q 003481 476 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG--------QLEFQQEVRVLSKLQHPHLVTLLGA--CPEAWSLVYEYL 545 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~--------~~~~~~E~~il~~l~HpnIv~l~g~--~~~~~~lV~E~~ 545 (816)
+.||+|++|.||+|.+.|..|++|+........ ...+.+|+.++..+.|++|.....+ ..+..++||||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 469999999999999999999999876543211 2357789999999999988655544 356688999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 546 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 546 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
+|++|.+++.... + .+..++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 82 ~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSNG------M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999885432 2 78899999999999999988 99999999999999 78999999998764
No 433
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.68 E-value=3.4e-17 Score=190.39 Aligned_cols=213 Identities=22% Similarity=0.254 Sum_probs=145.2
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccCCccceeeccC
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWSLVYEYLP 546 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~lV~E~~~ 546 (816)
-++|..++.|..|+||.||..++. .+.+|+| +++.+.. +.+ ++....+| +.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li----lRn---ilt~a~np-------------fvv----- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI----LRN---ILTFAGNP-------------FVV----- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh----hhc---cccccCCc-------------cee-----
Confidence 357889999999999999999876 6788884 3332211 001 22222333 333
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCc-
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY- 625 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~- 625 (816)
|+-...+... .+++.. ++.+++|||+.+ |+|||+||+|.+|+.=|++|+.|||+++........
T Consensus 136 -gDc~tllk~~---g~lPvd--------mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -GDCATLLKNI---GPLPVD--------MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -chhhhhcccC---CCCcch--------hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 4444444322 234332 388999999988 999999999999999999999999999864321110
Q ss_pred --------CCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHH--HHHHhhcCccccccC
Q 003481 626 --------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILD 695 (816)
Q Consensus 626 --------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~--~~~~~~~~~~~~~~d 695 (816)
..........+||+.|+|||++....|+..+|+|++|+|+||.+.|..||..... ....+....+ ...
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i-~wp- 278 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI-EWP- 278 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc-ccc-
Confidence 0011223466899999999999999999999999999999999999999964421 1111111100 000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 696 PLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 696 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
+-......+..++|.+.|+.+|..|--..
T Consensus 279 ----E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 279 ----EEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred ----ccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 00122456889999999999999996544
No 434
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=99.68 E-value=4e-16 Score=147.50 Aligned_cols=137 Identities=18% Similarity=0.239 Sum_probs=102.0
Q ss_pred cEEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 003481 23 EKVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNYL 101 (816)
Q Consensus 23 ~~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 101 (816)
++||||+|++. .+..|++||+..+.. ++.|++|||.++...... ............+..........
T Consensus 3 ~~Ilv~~d~~~-~~~~al~~a~~la~~~~~~i~~l~v~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 70 (140)
T PF00582_consen 3 KRILVAIDGSE-ESRRALRFALELAKRSGAEITLLHVIPPPPQYSF-----------SAAEDEESEEEAEEEEQARQAEA 70 (140)
T ss_dssp SEEEEEESSSH-HHHHHHHHHHHHHHHHTCEEEEEEEEESCHCHHH-----------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCH-HHHHHHHHHHHHHHhhCCeEEEEEeecccccccc-----------ccccccccccccchhhhhhhHHH
Confidence 69999999954 488999999998877 899999999985432211 00000000011011111111111
Q ss_pred HHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEe
Q 003481 102 RICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 173 (816)
Q Consensus 102 ~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~ 173 (816)
..+...+.......+..++++++|+++++++++|+||||+++++.+.+.++||++++|++++| |+|+||.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~~~~gs~~~~l~~~~~--~pVlvv~ 140 (140)
T PF00582_consen 71 EEAEAEGGIVIEVVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLERLLFGSVAEKLLRHAP--CPVLVVP 140 (140)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTTSSSHHHHHHHHHHTS--SEEEEEE
T ss_pred HHHhhhccceeEEEEEeeccchhhhhccccccceeEEEeccCCCCccCCCcCCHHHHHHHcCC--CCEEEeC
Confidence 566667777777777788999999999999999999999999999999999999999999999 9999984
No 435
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=1.2e-16 Score=162.28 Aligned_cols=129 Identities=25% Similarity=0.412 Sum_probs=105.8
Q ss_pred eeeeecceEEEEEEEcCeEEEEEEeccCCcc--------cHHHHHHHHHHHhcCCCCce--eeEeccccCCccceeeccC
Q 003481 477 KVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQ--------GQLEFQQEVRVLSKLQHPHL--VTLLGACPEAWSLVYEYLP 546 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~--------~~~~~~~E~~il~~l~HpnI--v~l~g~~~~~~~lV~E~~~ 546 (816)
.||+|+||.||+|.+.|..|++|+....... ....+.+|+.++..++|+++ ..+++...+..++||||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 3899999999999999999999996543211 12457789999999988754 4455555666799999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
|++|.+.+.... ..++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++|+|||++...
T Consensus 81 g~~l~~~~~~~~----------~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 81 GKPLKDVIEEGN----------DELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CccHHHHHhhcH----------HHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 999998874321 178999999999999988 99999999999999 889999999987653
No 436
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=1.6e-16 Score=165.61 Aligned_cols=142 Identities=19% Similarity=0.200 Sum_probs=110.2
Q ss_pred CCCccceeeeecceEEEEEE-E--cCeEEEEEEeccCCcc------------------------cHHHHHHHHHHHhcCC
Q 003481 471 NFSESFKVGQGGFGCVYKGE-M--LGRTVAIKMLYSHNMQ------------------------GQLEFQQEVRVLSKLQ 523 (816)
Q Consensus 471 ~f~~~~~LG~G~~g~Vy~~~-~--~g~~vAiK~l~~~~~~------------------------~~~~~~~E~~il~~l~ 523 (816)
.|.+...||+|+||.||+|. . .|..||||++...... ....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 37778899999999999998 3 4899999998754311 0123568999999997
Q ss_pred CC--ceeeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceE
Q 003481 524 HP--HLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNIL 601 (816)
Q Consensus 524 Hp--nIv~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NIL 601 (816)
+. .+.+++++ ...+|||||+++++|...+... ..+.......++.||+.+|.+||..+ .|+||||||+||+
T Consensus 109 ~~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIl 181 (237)
T smart00090 109 EAGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNIL 181 (237)
T ss_pred hcCCCCCeeeEe--cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEE
Confidence 53 34455543 3458999999998887755332 23455667899999999999999965 3999999999999
Q ss_pred ecCCCCeeEeecccceecc
Q 003481 602 LDSELSSKICDFGICRLVT 620 (816)
Q Consensus 602 l~~~~~vkL~DFGla~~~~ 620 (816)
++ ++.++|+|||.+....
T Consensus 182 i~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 182 VH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EE-CCCEEEEEChhhhccC
Confidence 99 8899999999987543
No 437
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.65 E-value=3.8e-16 Score=182.71 Aligned_cols=142 Identities=25% Similarity=0.334 Sum_probs=114.5
Q ss_pred HHHHHHhcCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCc--------ccHHHHHHHHHHHhcCCCCceeeEeccc
Q 003481 463 ADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNM--------QGQLEFQQEVRVLSKLQHPHLVTLLGAC 534 (816)
Q Consensus 463 ~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~--------~~~~~~~~E~~il~~l~HpnIv~l~g~~ 534 (816)
.........|...+.||+|+||.||+|.+.+..+++|+...... .....+.+|+.++..++|++++..+.++
T Consensus 326 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~ 405 (535)
T PRK09605 326 IKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYD 405 (535)
T ss_pred ccccccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEE
Confidence 33344455667788999999999999999877777765432211 1124588999999999999988765554
Q ss_pred --cCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEee
Q 003481 535 --PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICD 612 (816)
Q Consensus 535 --~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~D 612 (816)
.+..++||||+++++|.+++. ....++.+++.+|.|||+.+ |+||||||+|||+ .++.++|+|
T Consensus 406 ~~~~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liD 470 (535)
T PRK09605 406 VDPEEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLID 470 (535)
T ss_pred EeCCCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEe
Confidence 446889999999999999874 35678999999999999988 9999999999999 677999999
Q ss_pred cccceec
Q 003481 613 FGICRLV 619 (816)
Q Consensus 613 FGla~~~ 619 (816)
||+++..
T Consensus 471 FGla~~~ 477 (535)
T PRK09605 471 FGLGKYS 477 (535)
T ss_pred CcccccC
Confidence 9998753
No 438
>PRK10116 universal stress protein UspC; Provisional
Probab=99.65 E-value=1.7e-15 Score=145.33 Aligned_cols=135 Identities=13% Similarity=0.200 Sum_probs=101.9
Q ss_pred ccEEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 003481 22 GEKVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNY 100 (816)
Q Consensus 22 ~~~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 100 (816)
-++||||+|+|.. +..||++|++.+.. ++.++++||.+++..... + .....+.+.+...+..++.++.
T Consensus 3 ~~~ILv~~D~s~~-s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~l~~- 71 (142)
T PRK10116 3 YSNILVAVAVTPE-SQQLLAKAVSIARPVNGKISLITLASDPEMYNQ----F-----AAPMLEDLRSVMQEETQSFLDK- 71 (142)
T ss_pred CceEEEEccCCcc-hHHHHHHHHHHHHHhCCEEEEEEEccCcccchh----h-----hHHHHHHHHHHHHHHHHHHHHH-
Confidence 3699999999655 88999999998876 889999999875432111 1 1112223333333444445444
Q ss_pred HHHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEe
Q 003481 101 LRICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 173 (816)
Q Consensus 101 ~~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~ 173 (816)
++.+.|++....++..+++.++|+++|++.++|+||||+||++++.|.+ |||++|+++++ |+|+||.
T Consensus 72 --~~~~~~~~~~~~~~~~G~~~~~I~~~a~~~~~DLiV~g~~~~~~~~~~~--s~a~~v~~~~~--~pVLvv~ 138 (142)
T PRK10116 72 --LIQDADYPIEKTFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRAS--CSAKRVIASSE--VDVLLVP 138 (142)
T ss_pred --HHHhcCCCeEEEEEecCCHHHHHHHHHHHhCCCEEEEcCCcchHHHHHH--HHHHHHHhcCC--CCEEEEe
Confidence 3566788776556666788999999999999999999999999999975 79999999999 9999995
No 439
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=7e-16 Score=156.86 Aligned_cols=143 Identities=23% Similarity=0.212 Sum_probs=111.0
Q ss_pred HHHHHhcCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcc----------------------cHHHHHHHHHHHh
Q 003481 464 DLQTATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ----------------------GQLEFQQEVRVLS 520 (816)
Q Consensus 464 el~~~t~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~----------------------~~~~~~~E~~il~ 520 (816)
++......|...+.||.|+||.||++... |+.||||++...... ....+..|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 33333344777889999999999999884 899999987653210 0113567899999
Q ss_pred cCCCC--ceeeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCC
Q 003481 521 KLQHP--HLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQ 598 (816)
Q Consensus 521 ~l~Hp--nIv~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~ 598 (816)
.+.|+ ++...++. ...++||||+++++|...... .....++.+++.++.++|..+ |+||||||+
T Consensus 89 ~l~~~~i~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~ 154 (198)
T cd05144 89 ALYEEGFPVPKPIDW--NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEF 154 (198)
T ss_pred HHHHcCCCCCceeec--CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcc
Confidence 99877 44555543 346899999999999775421 235678899999999999977 999999999
Q ss_pred ceEecCCCCeeEeecccceecc
Q 003481 599 NILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 599 NILl~~~~~vkL~DFGla~~~~ 620 (816)
||+++.++.++|+|||++....
T Consensus 155 Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 155 NILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999986554
No 440
>PRK11175 universal stress protein UspE; Provisional
Probab=99.59 E-value=1.2e-14 Score=158.12 Aligned_cols=144 Identities=12% Similarity=0.078 Sum_probs=112.3
Q ss_pred ccEEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 003481 22 GEKVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNY 100 (816)
Q Consensus 22 ~~~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 100 (816)
-++||||+|+|.. +..|++||+..+.. ++++++|||.++.... .. +.. ..+......+...+..++.++.+
T Consensus 3 ~~~ILv~~D~s~~-~~~al~~a~~lA~~~~a~l~ll~v~~~~~~~-~~-~~~-----~~~~~~~~~~~~~~~~~~~l~~~ 74 (305)
T PRK11175 3 YQNILVVIDPNQD-DQPALRRAVYLAQRNGGKITAFLPIYDFSYE-MT-TLL-----SPDEREAMRQGVISQRTAWIREQ 74 (305)
T ss_pred cceEEEEcCCCcc-ccHHHHHHHHHHHhcCCCEEEEEeccCchhh-hh-ccc-----chhHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999555 88999999998876 7899999998643211 10 111 11111222222234556778888
Q ss_pred HHHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEeCC
Q 003481 101 LRICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVNKG 175 (816)
Q Consensus 101 ~~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~~g 175 (816)
...+...|++++..++..+++.++|+++|.++++|+||||++|.+++.+.++||++..|++++| |+|+||..+
T Consensus 75 ~~~~~~~~~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~~~~~~~~~gs~~~~l~~~~~--~pvlvv~~~ 147 (305)
T PRK11175 75 AKPYLDAGIPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQHDKLESVIFTPTDWHLLRKCP--CPVLMVKDQ 147 (305)
T ss_pred HHHHhhcCCceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCCcHHHhhccChhHHHHHhcCC--CCEEEeccc
Confidence 8888888999998777667888999999999999999999999999999999999999999999 999999753
No 441
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=1.4e-14 Score=138.94 Aligned_cols=133 Identities=23% Similarity=0.228 Sum_probs=112.4
Q ss_pred ccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCC--CceeeEeccccC--CccceeeccCCCc
Q 003481 474 ESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH--PHLVTLLGACPE--AWSLVYEYLPNGS 549 (816)
Q Consensus 474 ~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~H--pnIv~l~g~~~~--~~~lV~E~~~~gs 549 (816)
+.+.||.|+++.||++...+..+++|....... ...+..|+.++..++| .+++++++++.. ..+++|||++++.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 346799999999999999888999999865443 4578899999999976 588888887754 6899999999887
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 550 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 550 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
+..+ +......++.+++.+|.+||.....+++|+||+|.||+++.++.++++|||.+..
T Consensus 80 ~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 7654 4466778899999999999997545699999999999999989999999998764
No 442
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=8.5e-15 Score=147.16 Aligned_cols=136 Identities=23% Similarity=0.264 Sum_probs=97.1
Q ss_pred cceeeeecceEEEEEEEc-CeEEEEEEeccCCccc--HHH----------------------HHHHHHHHhcCCCCc--e
Q 003481 475 SFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG--QLE----------------------FQQEVRVLSKLQHPH--L 527 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~--~~~----------------------~~~E~~il~~l~Hpn--I 527 (816)
.+.||+|+||.||+|.+. +..||||++....... ... ...|...+.++.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 457999999999999887 8999999987543211 111 124555555554332 3
Q ss_pred eeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCceeeCCCCCCceEecCCC
Q 003481 528 VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSEL 606 (816)
Q Consensus 528 v~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~ivHrDIkp~NILl~~~~ 606 (816)
.+.+++ ...++||||++++.+......... .. .....++.+++.++.++|. .+ |+|+||||+||+++ ++
T Consensus 82 ~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL--NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec--CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CC
Confidence 444433 346899999999654322111110 11 5578899999999999999 77 99999999999999 89
Q ss_pred CeeEeecccceecc
Q 003481 607 SSKICDFGICRLVT 620 (816)
Q Consensus 607 ~vkL~DFGla~~~~ 620 (816)
.++|+|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999987554
No 443
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=99.53 E-value=1e-13 Score=129.36 Aligned_cols=129 Identities=23% Similarity=0.355 Sum_probs=108.6
Q ss_pred EEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003481 24 KVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNYLR 102 (816)
Q Consensus 24 ~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 102 (816)
+||||+|++.. +..+++||++.+.. +..|++|||.++....+. ........+.++.++.+..
T Consensus 1 ~ilv~i~~~~~-~~~~l~~a~~~a~~~~~~i~~l~v~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~ 63 (130)
T cd00293 1 RILVAVDGSEE-SERALRWAARLARRLGAELVLLHVVDPPPSSAA----------------ELAELLEEEARALLEALRE 63 (130)
T ss_pred CEEEEeCCCHH-HHHHHHHHHHHHHhcCCEEEEEEEecCCCCcch----------------hHHHHHHHHHHHHHHHHHH
Confidence 58999999554 88999999999887 899999999875432110 1223444677889999999
Q ss_pred HHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEE
Q 003481 103 ICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFV 172 (816)
Q Consensus 103 ~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv 172 (816)
.|...|+++...+..+. ++++|++++++.++|+||||+++++.+.+.+.|+++.+++++++ |+|++|
T Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~dlvvig~~~~~~~~~~~~~~~~~~ll~~~~--~pvliv 130 (130)
T cd00293 64 ALAEAGVKVETVVLEGD-PAEAILEAAEELGADLIVMGSRGRSGLRRLLLGSVAERVLRHAP--CPVLVV 130 (130)
T ss_pred HHhcCCCceEEEEecCC-CHHHHHHHHHHcCCCEEEEcCCCCCccceeeeccHHHHHHhCCC--CCEEeC
Confidence 99889999988877655 48999999999999999999999999999999999999999998 999985
No 444
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.52 E-value=5.6e-14 Score=146.86 Aligned_cols=133 Identities=22% Similarity=0.226 Sum_probs=104.9
Q ss_pred cceee-eecceEEEEEEEcCeEEEEEEeccCCc-------------ccHHHHHHHHHHHhcCCCCce--eeEeccccC--
Q 003481 475 SFKVG-QGGFGCVYKGEMLGRTVAIKMLYSHNM-------------QGQLEFQQEVRVLSKLQHPHL--VTLLGACPE-- 536 (816)
Q Consensus 475 ~~~LG-~G~~g~Vy~~~~~g~~vAiK~l~~~~~-------------~~~~~~~~E~~il~~l~HpnI--v~l~g~~~~-- 536 (816)
...|| .||.|+||.+...+..++||.+..... .....+.+|+.++.+|+|++| +..++++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 35688 899999999999999999998854221 123457889999999998875 666665421
Q ss_pred ----CccceeeccCC-CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEe
Q 003481 537 ----AWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKIC 611 (816)
Q Consensus 537 ----~~~lV~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~ 611 (816)
..++|||+++| .+|.+++... +++.. .+.+|+.+|.+||+.+ |+||||||.|||++.++.++|+
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 13599999997 6898887542 34433 3678999999999988 9999999999999999999999
Q ss_pred eccccee
Q 003481 612 DFGICRL 618 (816)
Q Consensus 612 DFGla~~ 618 (816)
|||.+..
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998754
No 445
>PRK11175 universal stress protein UspE; Provisional
Probab=99.52 E-value=8.4e-14 Score=151.42 Aligned_cols=141 Identities=12% Similarity=0.168 Sum_probs=98.4
Q ss_pred CccEEEEEecCCcccc------hhhHHHHhhccCC--CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHH
Q 003481 21 GGEKVYVALGKCVEKG------LSLLHWTLQRFGS--SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQK 92 (816)
Q Consensus 21 ~~~~VlVavD~s~~~s------~~Al~wal~~~~~--~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (816)
..++||||+|+|.+.+ ..||++|++.+.. +..+++|||.++...... ...+. ...+ .+.+..++.
T Consensus 151 ~~~~Ilva~D~s~~~~~~~~~~~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~~--~~~~~--~~~~---~~~~~~~~~ 223 (305)
T PRK11175 151 EGGKILVAVNVASEEPYHDALNEKLVEEAIDLAEQLNHAEVHLVNAYPVTPINIA--IELPE--FDPS---VYNDAIRGQ 223 (305)
T ss_pred CCCeEEEEeCCCCCccchhHHHHHHHHHHHHHHhhCcCCceEEEEEecCcchhcc--ccccc--cchh---hHHHHHHHH
Confidence 3579999999965532 5699999876542 578999999864332110 11110 0111 111111122
Q ss_pred HHHHHHHHHHHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEE
Q 003481 93 MKKLLDNYLRICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFV 172 (816)
Q Consensus 93 ~~~ll~~~~~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv 172 (816)
..+ ....++.+.++..+...+..+++.++|+++|++.++|+||||++|++++.+.++||++++|++++| |+|+||
T Consensus 224 ~~~---~l~~~~~~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~llGS~a~~v~~~~~--~pVLvv 298 (305)
T PRK11175 224 HLL---AMKALRQKFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVGRTGLSAAFLGNTAEHVIDHLN--CDLLAI 298 (305)
T ss_pred HHH---HHHHHHHHhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCccCCCcceeecchHHHHHhcCC--CCEEEE
Confidence 222 334445556777654444556789999999999999999999999999999999999999999999 999999
Q ss_pred e
Q 003481 173 N 173 (816)
Q Consensus 173 ~ 173 (816)
+
T Consensus 299 ~ 299 (305)
T PRK11175 299 K 299 (305)
T ss_pred c
Confidence 6
No 446
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]
Probab=99.48 E-value=6e-13 Score=128.60 Aligned_cols=145 Identities=17% Similarity=0.168 Sum_probs=113.2
Q ss_pred ccEEEEEec-CCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Q 003481 22 GEKVYVALG-KCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDN 99 (816)
Q Consensus 22 ~~~VlVavD-~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 99 (816)
.++|++++| + ++.+..|+++|++.... +..+.++||.++............ .. .............++.++.
T Consensus 5 ~~~il~~~d~~-s~~~~~a~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~ 78 (154)
T COG0589 5 YKKILVAVDVG-SEAAEKALEEAVALAKRLGAPLILLVVIDPLEPTALVSVALA-DA----PIPLSEEELEEEAEELLAE 78 (154)
T ss_pred cceEEEEeCCC-CHHHHHHHHHHHHHHHhcCCeEEEEEEecccccccccccccc-cc----hhhhhHHHHHHHHHHHHHH
Confidence 479999999 8 55589999999998776 788889999975432222111100 00 0111223334677889999
Q ss_pred HHHHHHHhccce-EEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEeC
Q 003481 100 YLRICVEAEVKA-RIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVNK 174 (816)
Q Consensus 100 ~~~~c~~~~v~~-~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~~ 174 (816)
..+...+.++.. +..+.+|.++...|++++.++++|+||||++|++++++.++|||+++|+++++ |+|+||..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~a~~~~adliV~G~~g~~~l~~~llGsvs~~v~~~~~--~pVlvv~~ 152 (154)
T COG0589 79 AKALAEAAGVPVVETEVVEGSPSAEEILELAEEEDADLIVVGSRGRSGLSRLLLGSVAEKVLRHAP--CPVLVVRS 152 (154)
T ss_pred HHHHHHHcCCCeeEEEEecCCCcHHHHHHHHHHhCCCEEEECCCCCccccceeeehhHHHHHhcCC--CCEEEEcc
Confidence 999999999995 77777777767999999999999999999999999999999999999999999 99999963
No 447
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=6.4e-15 Score=172.16 Aligned_cols=247 Identities=23% Similarity=0.324 Sum_probs=181.6
Q ss_pred cCCCccceeeeecceEEEEEEEc---CeEEEEEEeccCC--cccHHHHHHHHHHHhcCC-CCceeeEeccc--cCCccce
Q 003481 470 CNFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQ-HPHLVTLLGAC--PEAWSLV 541 (816)
Q Consensus 470 ~~f~~~~~LG~G~~g~Vy~~~~~---g~~vAiK~l~~~~--~~~~~~~~~E~~il~~l~-HpnIv~l~g~~--~~~~~lV 541 (816)
..|.....||+|.|+.|-..... ...+|.|.+.... .........|..+-..+. |+|++.+++.. .+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45677778999999999877663 4557777665443 122233445777777776 99999999987 4458899
Q ss_pred eeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCceeeCCCCCCceEecCCC-CeeEeecccceec
Q 003481 542 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH-SSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLV 619 (816)
Q Consensus 542 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH-~~~~~~ivHrDIkp~NILl~~~~-~vkL~DFGla~~~ 619 (816)
++|..++++.+.+.... ....+....-.++.|+..+|.|+| ..+ +.|+||||+|.+++..+ .++++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence 99999999998883221 113444667789999999999999 766 99999999999999999 9999999999987
Q ss_pred cC-CCCcCCCccccCCCCC-CCCCCCcccccc-CCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCC
Q 003481 620 TE-DTLYLPSFHRSTAPKG-SFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDP 696 (816)
Q Consensus 620 ~~-~~~~~~~~~~~~~~~g-t~~Y~aPE~~~~-~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~ 696 (816)
.. .... .......| ++.|+|||...+ ....+..|+||.|+++.-+++|..|+....... +........
T Consensus 176 ~~~~g~~----~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-----~~~~~~~~~ 246 (601)
T KOG0590|consen 176 RNKNGAE----RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-----GRYSSWKSN 246 (601)
T ss_pred cccCCcc----eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-----ccceeeccc
Confidence 76 3321 23345567 999999998877 456789999999999999999999996443321 111111111
Q ss_pred C---CCCCCHHHHHHHHHHHHHhhccCCCCCCCChH
Q 003481 697 L---AGDWPTFVARRLVDLGLQCCELYGRERPDITP 729 (816)
Q Consensus 697 ~---~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e 729 (816)
. .............+++.+++..+|..|.+..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~ 282 (601)
T KOG0590|consen 247 KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEE 282 (601)
T ss_pred ccccccCccccCChhhhhcccccccCCchhcccccc
Confidence 1 01112235567888899999999999999984
No 448
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=2.6e-13 Score=140.06 Aligned_cols=207 Identities=23% Similarity=0.263 Sum_probs=142.3
Q ss_pred HHHHhcCCCCceeeEeccccCC-------ccceeeccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 003481 516 VRVLSKLQHPHLVTLLGACPEA-------WSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKP 587 (816)
Q Consensus 516 ~~il~~l~HpnIv~l~g~~~~~-------~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~ 587 (816)
.+-|-++-|-|||+++.|+.+. ..++.|||..|+|..+|.+.. ....+......+|+.||+.||.|||+..
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~- 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD- 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-
Confidence 3445567899999999888542 568999999999999998653 2345677777899999999999999988
Q ss_pred CceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHH
Q 003481 588 EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQ 667 (816)
Q Consensus 588 ~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~e 667 (816)
++|+|+++..+.|++..+|-+|++--.-.. ..... ............+.++|.+||+=.....+.++|||+||+..++
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~-~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSV-NSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccc-cchhh-hhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 689999999999999999888875321111 11000 0001112234457889999998877778889999999999999
Q ss_pred HHhCCCCC-CChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHH
Q 003481 668 LLTGRLPV-GLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 735 (816)
Q Consensus 668 lltG~~Pf-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~L 735 (816)
|..|..-- .....+. ....+...+-.... ..-..++..|++..|..||+++.++.|.|
T Consensus 275 mailEiq~tnseS~~~---~ee~ia~~i~~len-------~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 275 MAILEIQSTNSESKVE---VEENIANVIIGLEN-------GLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred HHHheeccCCCcceee---hhhhhhhheeeccC-------ccccCcCcccccCCCCCCcchhhhhcCce
Confidence 99876532 1111110 01111111110000 11235677899999999999997776654
No 449
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.34 E-value=3.9e-12 Score=144.36 Aligned_cols=137 Identities=23% Similarity=0.290 Sum_probs=98.9
Q ss_pred ceeeeecceEEEEEEEc-CeEEEEEEeccCCccc----------------------------------------HHHHHH
Q 003481 476 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG----------------------------------------QLEFQQ 514 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~----------------------------------------~~~~~~ 514 (816)
..||.|++|.||+|++. |+.||||+.++..... .-.|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999985 9999999986642110 002455
Q ss_pred HHHHHhcCC-----CCce--eeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHH-HHHHHhhcC
Q 003481 515 EVRVLSKLQ-----HPHL--VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS-GLCFLHSSK 586 (816)
Q Consensus 515 E~~il~~l~-----HpnI--v~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~-aL~yLH~~~ 586 (816)
|...+.+++ ++++ .+++..+....+|||||++|++|.+++..... .+ .+..++..++. .+..+|..+
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhCC
Confidence 666665552 3332 23343334567999999999999987643211 12 23456666666 477889877
Q ss_pred CCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 587 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 587 ~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
++|+|+||.||+++.++.++|+|||++..+.
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999987664
No 450
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=4.5e-12 Score=125.05 Aligned_cols=130 Identities=20% Similarity=0.165 Sum_probs=100.2
Q ss_pred ceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCce-eeEeccccCCccceeeccCCCchhhhh
Q 003481 476 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL-VTLLGACPEAWSLVYEYLPNGSLQDRL 554 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~g~~~~~~~lV~E~~~~gsL~~~l 554 (816)
+.|+.|.++.||++...+..|++|+...... ....+..|+.++..+.+.++ .+++++..+..++||||++|.++....
T Consensus 4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~ 82 (170)
T cd05151 4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTED 82 (170)
T ss_pred eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCcccccc
Confidence 4689999999999999999999999765432 22346789999998865554 456666555678999999998876530
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 555 FRKSNVSPLLWKDRARIAAEIASGLCFLHSSK--PEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 555 ~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
. ....++.+++.+|..||..+ +..++|+|++|.||+++ ++.++|+|||.+..
T Consensus 83 --------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 83 --------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred --------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 0 11345778999999999987 23469999999999999 66899999998753
No 451
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=5.5e-12 Score=141.36 Aligned_cols=243 Identities=25% Similarity=0.246 Sum_probs=173.1
Q ss_pred CCCccceeee--ecceEEEEEEE--c--CeEEEEEEec--cCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--Ccc
Q 003481 471 NFSESFKVGQ--GGFGCVYKGEM--L--GRTVAIKMLY--SHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWS 539 (816)
Q Consensus 471 ~f~~~~~LG~--G~~g~Vy~~~~--~--g~~vAiK~l~--~~~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~--~~~ 539 (816)
.|.....+|. |.+|.||.+.. . +..+|+|.-+ .........=.+|+....++ .|+|.++.+..+.+ ..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556677999 99999999877 2 7789998732 22223333334566666666 49999998877754 356
Q ss_pred ceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHH----HHHHHhhcCCCceeeCCCCCCceEecCC-CCeeEeecc
Q 003481 540 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS----GLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFG 614 (816)
Q Consensus 540 lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~----aL~yLH~~~~~~ivHrDIkp~NILl~~~-~~vkL~DFG 614 (816)
+-+|++ +.+|..+...... .++....+.++.+... ||.++|+.+ ++|-|+||.||++..+ ...+++|||
T Consensus 195 iqtE~~-~~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeccc-cchhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 666776 5788887765543 3555667777777777 999999988 9999999999999999 889999999
Q ss_pred cceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCCh-HHHHHHhhcCccccc
Q 003481 615 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA-GEVRRAVSCGKLSSI 693 (816)
Q Consensus 615 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~-~~~~~~~~~~~~~~~ 693 (816)
+...+....... .+.......|..-|++||..+ +-++.+.|+|+||.++.+..+|..+.... ...|..+..+.+.
T Consensus 269 ~v~~i~~~~~~~-~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip-- 344 (524)
T KOG0601|consen 269 LVSKISDGNFSS-VFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP-- 344 (524)
T ss_pred eeEEccCCcccc-ceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc--
Confidence 999887765332 222234457888999999875 45889999999999999999987765321 1112222222111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 694 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 694 ~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
.++-...+..+..++..+++.+|..|++..
T Consensus 345 -----~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q 374 (524)
T KOG0601|consen 345 -----LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQ 374 (524)
T ss_pred -----hhhhcCcchhhhhHHHHhcCcchhhhhHHH
Confidence 112222334566689999999999999887
No 452
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=99.21 E-value=6.8e-12 Score=105.31 Aligned_cols=71 Identities=45% Similarity=0.839 Sum_probs=62.8
Q ss_pred CCCccccchhhhhcCCCCccCCCccccccchhhhhccCCCCCCccccccCcCCCCCcHHHHHHHHHHHhhC
Q 003481 746 VPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDWLCKS 816 (816)
Q Consensus 746 ~p~~~~~pilqeim~dP~~~~dg~t~~~~~i~~~l~~g~~~sp~t~~~l~~~~l~pn~~lr~~~~~~~~~~ 816 (816)
+|..|.|||..++|.||.+.++|.+|+...|..|+..++.++|+|+..++..+|+||.+||++|++|+.++
T Consensus 1 iP~~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~~~ 71 (73)
T PF04564_consen 1 IPDEFLCPITGELMRDPVILPSGHTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCAEN 71 (73)
T ss_dssp SSGGGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHHHC
T ss_pred CCcccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHHHc
Confidence 58899999999999999999999999999999999999999999999999999999999999999999875
No 453
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.11 E-value=8.4e-10 Score=110.80 Aligned_cols=135 Identities=16% Similarity=0.123 Sum_probs=98.0
Q ss_pred ceeeeecceEEEEEEEc--------CeEEEEEEeccCCc----------------------ccHHHHH----HHHHHHhc
Q 003481 476 FKVGQGGFGCVYKGEML--------GRTVAIKMLYSHNM----------------------QGQLEFQ----QEVRVLSK 521 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--------g~~vAiK~l~~~~~----------------------~~~~~~~----~E~~il~~ 521 (816)
..||.|--+.||.|... +..+|||+.+.... .....+. +|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999764 36899998753210 0012233 79999999
Q ss_pred CCC--CceeeEeccccCCccceeeccCCCchhh-hhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceeeCCCCC
Q 003481 522 LQH--PHLVTLLGACPEAWSLVYEYLPNGSLQD-RLFRKSNVSPLLWKDRARIAAEIASGLCFL-HSSKPEKIVHGDLKP 597 (816)
Q Consensus 522 l~H--pnIv~l~g~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~qia~aL~yL-H~~~~~~ivHrDIkp 597 (816)
+.. -++.+++++ ...+|||||+.++.+.. .|.. ..++..+...+..+++.+|..| |..+ |||+||++
T Consensus 83 l~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCH
Confidence 843 455666654 56789999997654432 2211 1244456678889999999999 7877 99999999
Q ss_pred CceEecCCCCeeEeecccceecc
Q 003481 598 QNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 598 ~NILl~~~~~vkL~DFGla~~~~ 620 (816)
.|||++ ++.+.|+|||.+....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999887654
No 454
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=99.11 E-value=4.1e-10 Score=122.89 Aligned_cols=102 Identities=12% Similarity=0.205 Sum_probs=78.5
Q ss_pred ccEEEEEecCCcccchhhHHHHhhccCC---CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHH
Q 003481 22 GEKVYVALGKCVEKGLSLLHWTLQRFGS---SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLD 98 (816)
Q Consensus 22 ~~~VlVavD~s~~~s~~Al~wal~~~~~---~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 98 (816)
-+|||||||| |+.|++|+++|++.+.. +++|++|||.++...... . ....+..+++++
T Consensus 5 ykkILVavDG-Se~S~~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~~-------~-----------~~~~~~~eelle 65 (357)
T PRK12652 5 ANRLLVPVAD-SVTVRQTVAYAVESAEEAAETPTVHLVAAASGRAVDPE-------G-----------QDELAAAEELLE 65 (357)
T ss_pred cCeEEEEeCC-CHHHHHHHHHHHHHHHhcCCCCEEEEEEEecCcccccc-------h-----------hHHHHHHHHHHH
Confidence 4799999999 55599999999998865 379999999975322110 0 111244556777
Q ss_pred HHHHHHHH------hccceEEEEEec-------CCHHHHHHHHHHHhCCCEEEeccC
Q 003481 99 NYLRICVE------AEVKARIITTEA-------DKIQKAIVQLMNIHGIQKLVMGAF 142 (816)
Q Consensus 99 ~~~~~c~~------~~v~~~~~v~e~-------~d~~~~Iv~~a~~~~id~lVmGs~ 142 (816)
.+.+.+++ .||++++.++++ ++|++.|++||+++++|+||||-.
T Consensus 66 ~~~~~~~~~l~~~~~gV~ve~~vv~~~~~~~~~G~pae~Iv~~Aee~~aDLIVm~~~ 122 (357)
T PRK12652 66 RVEVWATEDLGDDASSVTIETALLGTDEYLFGPGDYAEVLIAYAEEHGIDRVVLDPE 122 (357)
T ss_pred HHHHHHHHhhhcccCCCceEEEEEeccccccCCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 77777765 699999988764 689999999999999999999985
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.09 E-value=2.6e-09 Score=114.32 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=164.9
Q ss_pred ccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceee--------EeccccCC-ccceee
Q 003481 474 ESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVT--------LLGACPEA-WSLVYE 543 (816)
Q Consensus 474 ~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l-~HpnIv~--------l~g~~~~~-~~lV~E 543 (816)
....||+||-+.+|..-.-+..| .|++.......+.+. +..|... .||-+-. |+|--... ..++|.
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d~V-AKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRDQV-AKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCccccCCccceeeecchhhchh-heeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 35679999999999643333333 477766554433332 2333333 5664433 22222222 456777
Q ss_pred ccCCCc-hhhhhh---hcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceec
Q 003481 544 YLPNGS-LQDRLF---RKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 619 (816)
Q Consensus 544 ~~~~gs-L~~~l~---~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~ 619 (816)
.+.+.- ...++. +....+...|.-.++.+..++.+.+-||..| .+-+|++++|+|+.+++.+.|.|-..-...
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeec
Confidence 776652 222221 2334567899999999999999999999998 899999999999999999999985443333
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHhHHHHHHHHHHhC-CCCCCChHH-------HHHHhh
Q 003481 620 TEDTLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTG-RLPVGLAGE-------VRRAVS 686 (816)
Q Consensus 620 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~ksDVwSlGviL~elltG-~~Pf~~~~~-------~~~~~~ 686 (816)
..+. .....+|...|.+||... +-.-+...|-|.||+++++|+.| ++||..... ....+.
T Consensus 168 ~ng~-------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia 240 (637)
T COG4248 168 ANGT-------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA 240 (637)
T ss_pred cCCc-------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh
Confidence 2222 124567999999999654 33456789999999999999996 999963321 222344
Q ss_pred cCccccccC------CCCCCCCH-HHHHHHHHHHHHhhcc--CCCCCCCChHHHHHHHHHhh
Q 003481 687 CGKLSSILD------PLAGDWPT-FVARRLVDLGLQCCEL--YGRERPDITPSLVKELEQLH 739 (816)
Q Consensus 687 ~~~~~~~~d------~~~~~~~~-~~~~~l~~Li~~cl~~--dP~~RPs~~e~l~~~Le~l~ 739 (816)
.|.+...-+ +....||- -.++.+..|..+|+.. ++.-||+.. ..+..|..+.
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~-aW~aAl~al~ 301 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK-AWVAALDALR 301 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH-HHHHHHHHHH
Confidence 444433222 22334443 3556788888999875 467899998 6666666553
No 456
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.09 E-value=3.2e-10 Score=130.37 Aligned_cols=143 Identities=17% Similarity=0.218 Sum_probs=92.9
Q ss_pred hcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCccc----------------------------------H---
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG----------------------------------Q--- 509 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~~~----------------------------------~--- 509 (816)
-..|.. ..||+|++|.||+|++. |+.||||++++..... .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345665 68999999999999984 8999999997652100 0
Q ss_pred ---HHHHHHHHHHhcCC----CCcee---eEeccccCCccceeeccCCCchhhhh--hhcCC-CCCCCHHHHHHHHHHHH
Q 003481 510 ---LEFQQEVRVLSKLQ----HPHLV---TLLGACPEAWSLVYEYLPNGSLQDRL--FRKSN-VSPLLWKDRARIAAEIA 576 (816)
Q Consensus 510 ---~~~~~E~~il~~l~----HpnIv---~l~g~~~~~~~lV~E~~~~gsL~~~l--~~~~~-~~~l~~~~~~~i~~qia 576 (816)
-.|.+|...+.+++ +.+.+ ++|.-+....+|||||++|+.+.++- ...+. ...+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 12445555555552 33322 33333344578999999999998742 22110 0112222222333333
Q ss_pred HHHHHHhhcCCCceeeCCCCCCceEecCCC----CeeEeecccceeccCC
Q 003481 577 SGLCFLHSSKPEKIVHGDLKPQNILLDSEL----SSKICDFGICRLVTED 622 (816)
Q Consensus 577 ~aL~yLH~~~~~~ivHrDIkp~NILl~~~~----~vkL~DFGla~~~~~~ 622 (816)
...| ++|+|+||.||+++.++ .++++|||++..++..
T Consensus 277 ------f~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 277 ------FRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred ------HhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 3445 99999999999999888 9999999999887543
No 457
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.08 E-value=6.7e-10 Score=125.69 Aligned_cols=162 Identities=20% Similarity=0.243 Sum_probs=120.8
Q ss_pred cCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CccceeeccCCCchhhhhhhcCCCCCCCHHHHH
Q 003481 492 LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA 569 (816)
Q Consensus 492 ~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~ 569 (816)
.+.+|.|..++...........+-++.|+.++||||++++..+.. ..|||+|-+. .|..++.... -..+.
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~------~~~v~ 107 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG------KEEVC 107 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH------HHHHH
Confidence 377888888766555333446778889999999999999998855 4699999883 5676775433 35566
Q ss_pred HHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCcccccc
Q 003481 570 RIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 649 (816)
Q Consensus 570 ~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 649 (816)
..+.||+.||.|||..+ .++|++|.-+.|+++..|..||++|-++........ ......--..|..|+.+..
T Consensus 108 ~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~------~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA------PAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc------ccccchhhhcccChhhcCc
Confidence 77899999999999766 499999999999999999999999998765443221 0111122234667765432
Q ss_pred CCCCcchhHhHHHHHHHHHHhC
Q 003481 650 GVLTPKSDSYSFGLIILQLLTG 671 (816)
Q Consensus 650 ~~~s~ksDVwSlGviL~elltG 671 (816)
.. -..|.|.|||++++++.|
T Consensus 180 s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCc
Confidence 22 356999999999999999
No 458
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.06 E-value=7.3e-11 Score=138.43 Aligned_cols=249 Identities=21% Similarity=0.188 Sum_probs=172.8
Q ss_pred HhcCCCccceeeeecceEEEEEEEc--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecc--ccCCccc
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGA--CPEAWSL 540 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~--g~~vAiK~l~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~g~--~~~~~~l 540 (816)
.-+.|.+.+-+-+|.++.++.+.-. |...++|+...... ........+-.++-..+||.++..... |....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3455667778889999999987654 44455554433221 112222333334334456777766554 4567899
Q ss_pred eeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 541 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 541 V~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
|++|+.+++|...|+... ..+..-....+..+..+++|||... +.|+|++|.|+|...+++.+++|||......
T Consensus 882 ~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccc
Confidence 999999999999887654 3444445566778899999999976 8999999999999999999999998443321
Q ss_pred CC---CCc-----------------CC-----CccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCC
Q 003481 621 ED---TLY-----------------LP-----SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 675 (816)
Q Consensus 621 ~~---~~~-----------------~~-----~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf 675 (816)
.- ... .. .........||+.|.+||...+......+|+|++|++++|.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 10 000 00 001234567999999999999999999999999999999999999999
Q ss_pred CChHH--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 676 GLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 676 ~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
..... +...+..+ +......+...+....+++...+..+|.+|-.+.
T Consensus 1036 na~tpq~~f~ni~~~------~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQQIFENILNR------DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchhhhhhccccC------CCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 75433 21111111 1112233455667888999999999999998876
No 459
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.3e-09 Score=105.72 Aligned_cols=128 Identities=26% Similarity=0.390 Sum_probs=102.0
Q ss_pred eeeeecceEEEEEEEcCeEEEEEEeccCCcc--------cHHHHHHHHHHHhcCCC--CceeeEeccccCCccceeeccC
Q 003481 477 KVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQ--------GQLEFQQEVRVLSKLQH--PHLVTLLGACPEAWSLVYEYLP 546 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~--------~~~~~~~E~~il~~l~H--pnIv~l~g~~~~~~~lV~E~~~ 546 (816)
.+++|+-+.+|.+.+.|.++++|.=.+..-. ......+|..+|.+++- -+...++.+.++...|+|||++
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~ 82 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE 82 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence 5789999999999888888888864332211 12346789999998853 3445667777788899999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeeccccee
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~ 618 (816)
|..|.+.+... ...++..+-.-+.-||..+ |+|+||.++||++..+. +.++|||++..
T Consensus 83 G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 83 GELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999888554 2567888999999999998 99999999999997764 99999999864
No 460
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=2.6e-10 Score=128.01 Aligned_cols=248 Identities=22% Similarity=0.206 Sum_probs=173.4
Q ss_pred CcccCHHH-HHHHhcCCCccceeeeecceEEEEEEEc---CeEEEEEEeccCCcccHHH--HHHHHHHHhcC-CCCceee
Q 003481 457 SAEFSLAD-LQTATCNFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLE--FQQEVRVLSKL-QHPHLVT 529 (816)
Q Consensus 457 ~~~~~~~e-l~~~t~~f~~~~~LG~G~~g~Vy~~~~~---g~~vAiK~l~~~~~~~~~~--~~~E~~il~~l-~HpnIv~ 529 (816)
...|...+ ....+.+|.....||.|.|+.||..... +..|++|.+.........+ -..|+-+...+ .|.+++.
T Consensus 251 ~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g 330 (524)
T KOG0601|consen 251 ANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVG 330 (524)
T ss_pred hheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCC
Confidence 34455555 5556678999999999999999987654 6789999876654333222 12455555555 5778887
Q ss_pred Eeccc--cCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC-C
Q 003481 530 LLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-L 606 (816)
Q Consensus 530 l~g~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~-~ 606 (816)
++..+ ....|+=.|||.++++...+... .-+....++++..|++.++.++|+.. ++|+|+||+||++..+ +
T Consensus 331 ~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~---~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~ 404 (524)
T KOG0601|consen 331 KNSSWSQLRQGYIPLEFCEGGSSSLRSVTS---QMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGF 404 (524)
T ss_pred CCCCccccccccCchhhhcCcchhhhhHHH---HhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchh
Confidence 66544 34578999999999887766322 23556778999999999999999977 9999999999999886 8
Q ss_pred CeeEeecccceeccCCCCcCCCccccCCCCCCCCC-CCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHh
Q 003481 607 SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY-ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV 685 (816)
Q Consensus 607 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y-~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~ 685 (816)
..+++|||++..+.-.. .....++..| .+|.......+..+.|+||||.-+.+.++|.+--..... +..+
T Consensus 405 ~~~~~~~~~~t~~~~~~--------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-~~~i 475 (524)
T KOG0601|consen 405 FSKLGDFGCWTRLAFSS--------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-SLTI 475 (524)
T ss_pred hhhccccccccccceec--------ccccccccccccchhhccccccccccccccccccccccccCcccCccccc-ceee
Confidence 89999999987532111 1222233344 355566667788999999999999999998754321111 1112
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 686 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 686 ~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
..|.+. ..+. ....+..+...+...++..||.+.
T Consensus 476 ~~~~~p--------~~~~-~~~~~q~~~kv~~~~~~~~~~l~~ 509 (524)
T KOG0601|consen 476 RSGDTP--------NLPG-LKLQLQVLLKVMINPDRKRRPSAV 509 (524)
T ss_pred eccccc--------CCCc-hHHhhhhhhhhhcCCccccchhhh
Confidence 222221 1222 236788888899999999999887
No 461
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.05 E-value=1.2e-09 Score=112.40 Aligned_cols=139 Identities=24% Similarity=0.338 Sum_probs=108.6
Q ss_pred ceeeeecceEEEEEEEcC-eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCC--CceeeEeccccC-----CccceeeccC
Q 003481 476 FKVGQGGFGCVYKGEMLG-RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQH--PHLVTLLGACPE-----AWSLVYEYLP 546 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~g-~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~H--pnIv~l~g~~~~-----~~~lV~E~~~ 546 (816)
..||.|.++.||++...+ ..+++|....... .....+..|+.++..+.+ .++.+++.++.+ ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 468999999999998875 8999999765432 134468899999999965 345677777754 4589999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 003481 547 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK---------------------------------------- 586 (816)
Q Consensus 547 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~---------------------------------------- 586 (816)
|.++.+.+.. ..++..+...++.+++.+|.+||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9988876532 24677788888899999999998531
Q ss_pred -------------CCceeeCCCCCCceEecC--CCCeeEeeccccee
Q 003481 587 -------------PEKIVHGDLKPQNILLDS--ELSSKICDFGICRL 618 (816)
Q Consensus 587 -------------~~~ivHrDIkp~NILl~~--~~~vkL~DFGla~~ 618 (816)
+..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245899999999999998 56689999997754
No 462
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.98 E-value=4.9e-09 Score=101.25 Aligned_cols=141 Identities=24% Similarity=0.309 Sum_probs=103.6
Q ss_pred ccceeeeecceEEEEEEEcCeEEEEEEeccCCc--------ccHHHHHHHHHHHhcCCCCce--eeEeccccCCccceee
Q 003481 474 ESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNM--------QGQLEFQQEVRVLSKLQHPHL--VTLLGACPEAWSLVYE 543 (816)
Q Consensus 474 ~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~--------~~~~~~~~E~~il~~l~HpnI--v~l~g~~~~~~~lV~E 543 (816)
....|-+|+-+.|+++.+.|+.+.||.-..... -...+..+|.++|.+++--.| .+++-+-.....|+||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 456789999999999999999999986432211 123457789999999853333 2233222456789999
Q ss_pred ccCC-CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC---CeeEeeccccee
Q 003481 544 YLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDFGICRL 618 (816)
Q Consensus 544 ~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vkL~DFGla~~ 618 (816)
|++| .++.+++........ .-.....++..|-..+.-||.++ |||+||..+||+|..++ .+.|+|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 9987 478888776543222 22333688999999999999998 99999999999996654 358999999754
No 463
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.85 E-value=4.9e-08 Score=107.42 Aligned_cols=207 Identities=22% Similarity=0.228 Sum_probs=144.0
Q ss_pred ceEEEEEEE--cCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc------CCccceeeccCCC-chhhh
Q 003481 483 FGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP------EAWSLVYEYLPNG-SLQDR 553 (816)
Q Consensus 483 ~g~Vy~~~~--~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~------~~~~lV~E~~~~g-sL~~~ 553 (816)
..+.|++.. +|..|++|+++............-+++++++.|+|+|++..+|. ...+|||+|.++. +|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 457788876 49999999995444333322334578899999999999988763 2478999999875 78776
Q ss_pred hhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 554 LFRKSN------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 554 l~~~~~------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
-+.... ...+++..+|.++.|+..||.++|+.| +.-+-|.|.+||++.+..++|+..|+.-.+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 553321 234678899999999999999999998 88899999999999999999998887665543
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCC
Q 003481 622 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 701 (816)
Q Consensus 622 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~ 701 (816)
+.. +-+.. -.+-|.=.||.+++.|.||..--...+..... . ....
T Consensus 446 d~~--------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s----~--------~~~I 490 (655)
T KOG3741|consen 446 DPT--------------------EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSS----H--------LTRI 490 (655)
T ss_pred CCC--------------------cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHH----H--------HHHh
Confidence 220 11111 23679999999999999996432111100000 0 0112
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCCh
Q 003481 702 PTFVARRLVDLGLQCCELYGRERPDIT 728 (816)
Q Consensus 702 ~~~~~~~l~~Li~~cl~~dP~~RPs~~ 728 (816)
...++.++.+++.-....++.+ -++.
T Consensus 491 ~~~yS~D~rn~v~yl~s~~~~~-ksI~ 516 (655)
T KOG3741|consen 491 TTTYSTDLRNVVEYLESLNFRE-KSIQ 516 (655)
T ss_pred hhhhhHHHHHHHHHHHhcCccc-ccHH
Confidence 3346667778888888877775 3444
No 464
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.74 E-value=1e-07 Score=101.07 Aligned_cols=136 Identities=17% Similarity=0.118 Sum_probs=97.5
Q ss_pred eeeecceEEEEEEEcCeEEEEEEeccCCcc-----------cHHHHHHHHHHHhcCCCCce--eeEeccc-------cCC
Q 003481 478 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQ-----------GQLEFQQEVRVLSKLQHPHL--VTLLGAC-------PEA 537 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~-----------~~~~~~~E~~il~~l~HpnI--v~l~g~~-------~~~ 537 (816)
+-......|+++.+.|+.|.||........ ....+.+|...+.+|..-+| ..++++. ...
T Consensus 30 v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~ 109 (268)
T PRK15123 30 FRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRT 109 (268)
T ss_pred EecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccce
Confidence 333344457788888999999977443311 11247789998888843222 2333332 123
Q ss_pred ccceeeccCCC-chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC-------CCCee
Q 003481 538 WSLVYEYLPNG-SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------ELSSK 609 (816)
Q Consensus 538 ~~lV~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~-------~~~vk 609 (816)
.+||+|++++. +|.+++..... .+.+...+..++.+++..+.-||..| |+|+|+++.|||++. ++.+.
T Consensus 110 s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~ 185 (268)
T PRK15123 110 SFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLS 185 (268)
T ss_pred eEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEE
Confidence 67999999886 89998854321 23455677899999999999999988 999999999999975 46799
Q ss_pred Eeecccce
Q 003481 610 ICDFGICR 617 (816)
Q Consensus 610 L~DFGla~ 617 (816)
|+||+.+.
T Consensus 186 LIDl~r~~ 193 (268)
T PRK15123 186 VIDLHRAQ 193 (268)
T ss_pred EEECCccc
Confidence 99999775
No 465
>PRK10490 sensor protein KdpD; Provisional
Probab=98.69 E-value=1.6e-07 Score=116.32 Aligned_cols=124 Identities=16% Similarity=0.180 Sum_probs=98.1
Q ss_pred CccEEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Q 003481 21 GGEKVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDN 99 (816)
Q Consensus 21 ~~~~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 99 (816)
..++|||+|+++.+ +.+.+++|.+.... ++.+++|||..+.... .. .+..+ -+..
T Consensus 249 ~~eriLV~v~~~~~-~~~lIr~~~rlA~~~~a~~~~l~V~~~~~~~------~~----------------~~~~~-~l~~ 304 (895)
T PRK10490 249 TRDAILLCIGHNTG-SEKLVRTAARLAARLGSVWHAVYVETPRLHR------LP----------------EKKRR-AILS 304 (895)
T ss_pred cCCeEEEEECCCcc-hHHHHHHHHHHHHhcCCCEEEEEEecCCcCc------CC----------------HHHHH-HHHH
Confidence 45789999999655 88899999998877 8999999999652110 00 01222 3344
Q ss_pred HHHHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEe
Q 003481 100 YLRICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 173 (816)
Q Consensus 100 ~~~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~ 173 (816)
+..+|++.|-++. ++.++|++++|++||.+++|+.||||.++++.+ .+.||+++.+++.++ .-.|+||.
T Consensus 305 ~~~lA~~lGa~~~--~~~~~dva~~i~~~A~~~~vt~IViG~s~~~~~--~~~~s~~~~l~r~~~-~idi~iv~ 373 (895)
T PRK10490 305 ALRLAQELGAETA--TLSDPAEEKAVLRYAREHNLGKIIIGRRASRRW--WRRESFADRLARLGP-DLDLVIVA 373 (895)
T ss_pred HHHHHHHcCCEEE--EEeCCCHHHHHHHHHHHhCCCEEEECCCCCCCC--ccCCCHHHHHHHhCC-CCCEEEEe
Confidence 4469999998844 557899999999999999999999999998876 557899999999998 56889985
No 466
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.69 E-value=1.3e-07 Score=94.60 Aligned_cols=125 Identities=26% Similarity=0.277 Sum_probs=81.5
Q ss_pred EEEEEEEc-CeEEEEEEeccCCc---------------------c-----cHHHHHHHHHHHhcCCCC--ceeeEecccc
Q 003481 485 CVYKGEML-GRTVAIKMLYSHNM---------------------Q-----GQLEFQQEVRVLSKLQHP--HLVTLLGACP 535 (816)
Q Consensus 485 ~Vy~~~~~-g~~vAiK~l~~~~~---------------------~-----~~~~~~~E~~il~~l~Hp--nIv~l~g~~~ 535 (816)
.||.|... |..||||+.+.... . ......+|.+.|.++..- ++.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 48999875 88999998754210 0 012356899999999765 45666644
Q ss_pred CCccceeeccC--CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH-HhhcCCCceeeCCCCCCceEecCCCCeeEee
Q 003481 536 EAWSLVYEYLP--NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF-LHSSKPEKIVHGDLKPQNILLDSELSSKICD 612 (816)
Q Consensus 536 ~~~~lV~E~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~y-LH~~~~~~ivHrDIkp~NILl~~~~~vkL~D 612 (816)
+..+|||||++ |..+..+. ... ++......++.+++..+.. +|..+ |+|+||.+.|||++.+ .+.|+|
T Consensus 79 ~~~~ivME~I~~~G~~~~~l~-~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 79 NRNVIVMEYIGEDGVPLPRLK-DVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ETTEEEEE--EETTEEGGCHH-HCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--
T ss_pred eCCEEEEEecCCCccchhhHH-hcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEe
Confidence 35689999998 55554433 221 1123456778888886665 56877 9999999999999887 999999
Q ss_pred cccceecc
Q 003481 613 FGICRLVT 620 (816)
Q Consensus 613 FGla~~~~ 620 (816)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99887654
No 467
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.56 E-value=2e-08 Score=114.50 Aligned_cols=152 Identities=23% Similarity=0.381 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcC-CCc--cccCCCCCCCCCCCccccc
Q 003481 572 AAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL-PSF--HRSTAPKGSFPYADPEYHR 648 (816)
Q Consensus 572 ~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~-~~~--~~~~~~~gt~~Y~aPE~~~ 648 (816)
+.+++.||.|+|..- .+||++|.|++|.++.++..||+.|+++........+. ..+ .......-...|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345669999999975 59999999999999999999999999987665422111 000 0111223456799999999
Q ss_pred cCCCCcchhHhHHHHHHHHHHh-CCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 003481 649 TGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 727 (816)
Q Consensus 649 ~~~~s~ksDVwSlGviL~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~ 727 (816)
....++++|+|||||++|.+.. |+.-+...+.....-..+. ..+.....+...++.++.+-+.+++..++.-||++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~---~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN---LLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc---ccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 8888999999999999999995 5444432211111100000 11111223345667788889999999999999966
Q ss_pred h
Q 003481 728 T 728 (816)
Q Consensus 728 ~ 728 (816)
.
T Consensus 260 ~ 260 (700)
T KOG2137|consen 260 D 260 (700)
T ss_pred h
Confidence 5
No 468
>PRK09902 hypothetical protein; Provisional
Probab=98.55 E-value=8.7e-07 Score=89.37 Aligned_cols=152 Identities=20% Similarity=0.184 Sum_probs=111.3
Q ss_pred HHHHHHHhcCCCccceeeeecceEEEEEEEcCeEEEEEEeccC------CcccHHHHHHHHHHHhcCCCC--ceeeEecc
Q 003481 462 LADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSH------NMQGQLEFQQEVRVLSKLQHP--HLVTLLGA 533 (816)
Q Consensus 462 ~~el~~~t~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~------~~~~~~~~~~E~~il~~l~Hp--nIv~l~g~ 533 (816)
|+.+-.....+-..-.-|+||.+.|+.-.+.|..+-+|.-... .+.+...|.+|+..|.+|..- ++.+.+ +
T Consensus 10 f~~~w~~~~~wve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f 88 (216)
T PRK09902 10 FNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-F 88 (216)
T ss_pred HHHHHhCCCceecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-e
Confidence 3333334444444444688999999999988888889975421 134667899999999999532 244444 3
Q ss_pred cc---C----CccceeeccCCC-chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCC
Q 003481 534 CP---E----AWSLVYEYLPNG-SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE 605 (816)
Q Consensus 534 ~~---~----~~~lV~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~ 605 (816)
+. . ..+||+|-+.|- +|.+++.... ..+.+...+..++.+++.+|.-||..+ +.|+|+.+.|||++.+
T Consensus 89 ~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~ 164 (216)
T PRK09902 89 GEAVKIEGEWRALLVTEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTE 164 (216)
T ss_pred eeeeccCCceEEEEEEEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCC
Confidence 31 1 257999988643 8888875543 235567778899999999999999988 9999999999999866
Q ss_pred CC--eeEeeccccee
Q 003481 606 LS--SKICDFGICRL 618 (816)
Q Consensus 606 ~~--vkL~DFGla~~ 618 (816)
+. ++++||--++.
T Consensus 165 g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 165 GKAEAGFLDLEKSRR 179 (216)
T ss_pred CCeeEEEEEhhccch
Confidence 67 99999986654
No 469
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.46 E-value=9.5e-07 Score=91.06 Aligned_cols=134 Identities=22% Similarity=0.217 Sum_probs=95.7
Q ss_pred CCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcc----------------------cHHHHHHHHHHHhcCCCC--c
Q 003481 472 FSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ----------------------GQLEFQQEVRVLSKLQHP--H 526 (816)
Q Consensus 472 f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~----------------------~~~~~~~E~~il~~l~Hp--n 526 (816)
..++.+||-|--+.||.|... |.++|||.-+..... ......+|.++|.+|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456789999999999999997 999999975432110 122356899999998644 5
Q ss_pred eeeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC
Q 003481 527 LVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL 606 (816)
Q Consensus 527 Iv~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~ 606 (816)
+.+.+++ +...+||||++|-.|...-. +-...-.|+..|+.-+.-+-..| |||+|+++-|||++.+|
T Consensus 173 VP~P~~~--nRHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW--NRHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc--ccceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecCC
Confidence 6665554 34579999999876655321 12223344555555555555656 99999999999999999
Q ss_pred CeeEeeccccee
Q 003481 607 SSKICDFGICRL 618 (816)
Q Consensus 607 ~vkL~DFGla~~ 618 (816)
.+.++||--+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999975543
No 470
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.45 E-value=7.3e-07 Score=91.20 Aligned_cols=123 Identities=26% Similarity=0.304 Sum_probs=88.4
Q ss_pred EcCeEEEEEEeccCCc-------ccHHHHHHHHHHHhcCCCCc--eeeEeccccC------CccceeeccCCC-chhhhh
Q 003481 491 MLGRTVAIKMLYSHNM-------QGQLEFQQEVRVLSKLQHPH--LVTLLGACPE------AWSLVYEYLPNG-SLQDRL 554 (816)
Q Consensus 491 ~~g~~vAiK~l~~~~~-------~~~~~~~~E~~il~~l~Hpn--Iv~l~g~~~~------~~~lV~E~~~~g-sL~~~l 554 (816)
..++.+-+|.+..... -......+|...+.+|..-+ ....+++... ..+||+|++++. +|.+++
T Consensus 30 ~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~ 109 (206)
T PF06293_consen 30 LVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLL 109 (206)
T ss_pred ccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHH
Confidence 3356666665432211 23345778888888874332 3344444322 357999999885 899988
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCC---CeeEeecccceec
Q 003481 555 FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDFGICRLV 619 (816)
Q Consensus 555 ~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~---~vkL~DFGla~~~ 619 (816)
..... ++......++.+++..+.-||..+ |+|+|++|.|||++.+. .+.|+||+-++..
T Consensus 110 ~~~~~---~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 110 QQWEQ---LDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred Hhhcc---cchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 76432 444667899999999999999998 99999999999998886 8999999987653
No 471
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=98.39 E-value=3e-06 Score=98.31 Aligned_cols=131 Identities=18% Similarity=0.173 Sum_probs=106.3
Q ss_pred CccEEEEEecCCcccchhhHHHHhhccCC-CCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Q 003481 21 GGEKVYVALGKCVEKGLSLLHWTLQRFGS-SREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDN 99 (816)
Q Consensus 21 ~~~~VlVavD~s~~~s~~Al~wal~~~~~-~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 99 (816)
..++|+|+|+++.. +.+-++||-..... ++..++|||..|..... .++.+..+..
T Consensus 247 ~~e~ilvcI~~~~~-~e~liR~a~RlA~~~~a~~~av~v~~~~~~~~-----------------------~~~~~~~l~~ 302 (890)
T COG2205 247 ARERILVCISGSPG-SEKLIRRAARLASRLHAKWTAVYVETPELHRL-----------------------SEKEARRLHE 302 (890)
T ss_pred ccceEEEEECCCCc-hHHHHHHHHHHHHHhCCCeEEEEEeccccccc-----------------------cHHHHHHHHH
Confidence 34899999999666 77799999877766 78999999997533210 1344556777
Q ss_pred HHHHHHHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCCcchhhhhhcCCCCceEEEEeCCcee
Q 003481 100 YLRICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVNKGKHV 178 (816)
Q Consensus 100 ~~~~c~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~gsVs~~V~~~ap~~C~V~vv~~g~~~ 178 (816)
...+|++-|-+.. ++.++|++++|++||..+++++||||-+.++.++|.+.||..+.++++++ ...|++|..+...
T Consensus 303 ~~~Lae~lGae~~--~l~~~dv~~~i~~ya~~~~~TkiViG~~~~~rw~~~~~~~l~~~L~~~~~-~idv~ii~~~~~~ 378 (890)
T COG2205 303 NLRLAEELGAEIV--TLYGGDVAKAIARYAREHNATKIVIGRSRRSRWRRLFKGSLADRLAREAP-GIDVHIVALDAPP 378 (890)
T ss_pred HHHHHHHhCCeEE--EEeCCcHHHHHHHHHHHcCCeeEEeCCCcchHHHHHhcccHHHHHHhcCC-CceEEEeeCCCCc
Confidence 8889998886554 45689999999999999999999999999999999999999999999998 5688888755444
No 472
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.23 E-value=2.5e-05 Score=78.48 Aligned_cols=106 Identities=25% Similarity=0.267 Sum_probs=84.5
Q ss_pred HHHHHHHhcCCC-CceeeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcee
Q 003481 513 QQEVRVLSKLQH-PHLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 591 (816)
Q Consensus 513 ~~E~~il~~l~H-pnIv~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iv 591 (816)
.+|.-+|..+++ +++.+++|+|. .++|.||...+++...-..-...-..+|..+.+|+.+++..+.+|+......+.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG--~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~ 84 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG--RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY 84 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC--CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 468888888865 69999999994 478999998776653211111112468999999999999999999986655688
Q ss_pred eCCCCCCceEecCCCCeeEeecccceecc
Q 003481 592 HGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 592 HrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
-.|++|+|+-++++|++|++|...+....
T Consensus 85 lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 85 LCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred EeecchHHeEEeCCCcEEEEechhcchhH
Confidence 99999999999999999999998776543
No 473
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.22 E-value=5.5e-06 Score=83.94 Aligned_cols=135 Identities=20% Similarity=0.193 Sum_probs=93.1
Q ss_pred HhcCCCccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHH---------HHHHHHHhcCCC---CceeeEeccc-
Q 003481 468 ATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEF---------QQEVRVLSKLQH---PHLVTLLGAC- 534 (816)
Q Consensus 468 ~t~~f~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~---------~~E~~il~~l~H---pnIv~l~g~~- 534 (816)
..++|...+.+-......|.+-..+|..+++|..+......+..| .+.+..+.+++. ..++.++-+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 446788878888888888888888899999999876544332222 234444444432 2222222221
Q ss_pred ------cCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCe
Q 003481 535 ------PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 608 (816)
Q Consensus 535 ------~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~v 608 (816)
....+|||||++|..|.+... ++. .+...+..++.-||..| ++|+|++|.|++++.+ .+
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~-~i 173 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN-GI 173 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-cE
Confidence 234568999999988877541 221 24566778899999988 9999999999999865 59
Q ss_pred eEeecccce
Q 003481 609 KICDFGICR 617 (816)
Q Consensus 609 kL~DFGla~ 617 (816)
+++||+..+
T Consensus 174 ~iID~~~k~ 182 (229)
T PF06176_consen 174 RIIDTQGKR 182 (229)
T ss_pred EEEECcccc
Confidence 999998654
No 474
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.22 E-value=3e-06 Score=97.23 Aligned_cols=138 Identities=20% Similarity=0.273 Sum_probs=91.7
Q ss_pred ceeeeecceEEEEEEEc-CeEEEEEEeccCCccc----------------------------------------HHHHHH
Q 003481 476 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG----------------------------------------QLEFQQ 514 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~----------------------------------------~~~~~~ 514 (816)
..|+.++-|.||+|++. |+.||||+.++.-... .-.+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 57999999999999998 9999999987642110 001345
Q ss_pred HHHHHhcCC-----CCce--eeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHH-HHHHhhcC
Q 003481 515 EVRVLSKLQ-----HPHL--VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG-LCFLHSSK 586 (816)
Q Consensus 515 E~~il~~l~-----HpnI--v~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~a-L~yLH~~~ 586 (816)
|...+.+++ .|++ .++|--+.....|+|||++|..+.+...-.. ..++-.. |+..++.+ +..+-..|
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~---ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDRKE---LAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 555555542 3332 2333323456789999999999998753322 2244333 33333333 22222233
Q ss_pred CCceeeCCCCCCceEecCCCCeeEeecccceeccC
Q 003481 587 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 621 (816)
Q Consensus 587 ~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~ 621 (816)
++|.|.+|.||+++.+|.+.+.|||+...+++
T Consensus 286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999877654
No 475
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.19 E-value=8.3e-06 Score=84.32 Aligned_cols=141 Identities=25% Similarity=0.268 Sum_probs=84.1
Q ss_pred ceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCC--ceeeEecccc-----CCccceeeccCCC
Q 003481 476 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP--HLVTLLGACP-----EAWSLVYEYLPNG 548 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~g~~~-----~~~~lV~E~~~~g 548 (816)
+.|+.|..+.||+....+..+++|..... .....+..|..++..+... .+.+++.++. ...+++|++++|.
T Consensus 3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 56899999999999998889999997554 3455677898888888432 3456665431 1257899999998
Q ss_pred chhh----------------hhh---hc-CCCCCCCHHHH---------HHH------------HHHHHH-HHHHHhhc-
Q 003481 549 SLQD----------------RLF---RK-SNVSPLLWKDR---------ARI------------AAEIAS-GLCFLHSS- 585 (816)
Q Consensus 549 sL~~----------------~l~---~~-~~~~~l~~~~~---------~~i------------~~qia~-aL~yLH~~- 585 (816)
.+.. .+. .. ....++.+... ... ...+.. .+..++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 8777 111 11 01111111110 000 112222 33444432
Q ss_pred ---CCCceeeCCCCCCceEec-CCCCeeEeeccccee
Q 003481 586 ---KPEKIVHGDLKPQNILLD-SELSSKICDFGICRL 618 (816)
Q Consensus 586 ---~~~~ivHrDIkp~NILl~-~~~~vkL~DFGla~~ 618 (816)
.+..++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 345699999999999999 566667999987654
No 476
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.19 E-value=1.1e-05 Score=83.79 Aligned_cols=137 Identities=14% Similarity=0.198 Sum_probs=80.8
Q ss_pred ceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCc--eeeEeccc--cCCccceeeccCCCc-h
Q 003481 476 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPH--LVTLLGAC--PEAWSLVYEYLPNGS-L 550 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~Hpn--Iv~l~g~~--~~~~~lV~E~~~~gs-L 550 (816)
..||+|..+.||+. .+..+++|...... ......+|.+++..+..-+ +.+.++++ .+...+||++++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 56999999999984 35677888876433 3345688999998885433 34555554 334678999998863 2
Q ss_pred hhhh---------------------hhcCCCCCCCHHHHHH-HHH----------HHHH-HHHHHhhc-CCCceeeCCCC
Q 003481 551 QDRL---------------------FRKSNVSPLLWKDRAR-IAA----------EIAS-GLCFLHSS-KPEKIVHGDLK 596 (816)
Q Consensus 551 ~~~l---------------------~~~~~~~~l~~~~~~~-i~~----------qia~-aL~yLH~~-~~~~ivHrDIk 596 (816)
...+ +... ........... +.. .+.. ...+|... .+..++|+|+.
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~-~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTK-CDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCC-CCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 1111 1100 01111111110 000 0111 12222211 12357899999
Q ss_pred CCceEecCCCCeeEeeccccee
Q 003481 597 PQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 597 p~NILl~~~~~vkL~DFGla~~ 618 (816)
|.||+++.++ +.|+||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999888 99999997653
No 477
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=98.14 E-value=1.4e-06 Score=70.92 Aligned_cols=62 Identities=50% Similarity=0.903 Sum_probs=59.1
Q ss_pred cccchhhhhcCCCCccCCCccccccchhhhhccCCCCCCccccccCcCCCCCcHHHHHHHHHH
Q 003481 750 FLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDW 812 (816)
Q Consensus 750 ~~~pilqeim~dP~~~~dg~t~~~~~i~~~l~~g~~~sp~t~~~l~~~~l~pn~~lr~~~~~~ 812 (816)
+.||+..++|.+|.+.+.|..|....|..|+.. +.++|+++..++..+++||.+||++|++|
T Consensus 2 ~~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~-~~~cP~~~~~~~~~~l~~~~~l~~~i~~~ 63 (63)
T smart00504 2 FLCPISLEVMKDPVILPSGQTYERRAIEKWLLS-HGTDPVTGQPLTHEDLIPNLALKSAIQEW 63 (63)
T ss_pred cCCcCCCCcCCCCEECCCCCEEeHHHHHHHHHH-CCCCCCCcCCCChhhceeCHHHHHHHHhC
Confidence 568999999999999999999999999999988 78999999999999999999999999998
No 478
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.05 E-value=1.3e-05 Score=91.69 Aligned_cols=139 Identities=17% Similarity=0.192 Sum_probs=92.7
Q ss_pred ceeeeecceEEEEEEEc-CeEEEEEEeccCCccc-------------------------------------HHHHHHHHH
Q 003481 476 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG-------------------------------------QLEFQQEVR 517 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~-------------------------------------~~~~~~E~~ 517 (816)
..||.-+.|.||+|++. |..||||+-++.-... .-.|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 46899999999999997 8899999976542110 012445555
Q ss_pred HHhcC----CCCc------eeeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 003481 518 VLSKL----QHPH------LVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 587 (816)
Q Consensus 518 il~~l----~Hpn------Iv~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~ 587 (816)
-..++ .|-+ |.++|-.+.....|+||||+|..+.|.-.-.. ..++-..+..-+.++..-.-+-|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~i~~~l~~~~~~qIf~~---- 320 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK--RGISPHDILNKLVEAYLEQIFKT---- 320 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH--cCCCHHHHHHHHHHHHHHHHHhc----
Confidence 44433 3555 55666666667899999999998877543222 12444444433333322222333
Q ss_pred CceeeCCCCCCceEecC----CCCeeEeecccceeccC
Q 003481 588 EKIVHGDLKPQNILLDS----ELSSKICDFGICRLVTE 621 (816)
Q Consensus 588 ~~ivHrDIkp~NILl~~----~~~vkL~DFGla~~~~~ 621 (816)
|++|+|-+|.||+++. ++.+.+-|||+...+..
T Consensus 321 -GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 321 -GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred -CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 3999999999999983 67899999999887654
No 479
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.99 E-value=7.2e-05 Score=76.69 Aligned_cols=151 Identities=22% Similarity=0.239 Sum_probs=95.4
Q ss_pred CHHHHHHHhcCCCccce---eeeecceEEEEEEEc-CeEEEEEEeccCCccc-------------------HHH-----H
Q 003481 461 SLADLQTATCNFSESFK---VGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG-------------------QLE-----F 512 (816)
Q Consensus 461 ~~~el~~~t~~f~~~~~---LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~-------------------~~~-----~ 512 (816)
+...|....++..+... |+.|.-+.||+|... +..||+|++....... ... .
T Consensus 36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~ 115 (268)
T COG1718 36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA 115 (268)
T ss_pred HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence 34444444444444444 556667789998764 8999999986543211 111 2
Q ss_pred HHHHHHHhcCC--CCceeeEeccccCCccceeeccCCCch-hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc
Q 003481 513 QQEVRVLSKLQ--HPHLVTLLGACPEAWSLVYEYLPNGSL-QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEK 589 (816)
Q Consensus 513 ~~E~~il~~l~--HpnIv~l~g~~~~~~~lV~E~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ 589 (816)
..|+.-|.++. +-.+.+-+++. ...|||||+....+ .-.|.. .++...+...+..+++..+.-|-... +
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~~--~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~~a--~ 187 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAFR--NNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYKEA--G 187 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceeec--CCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHHhc--C
Confidence 35666666663 22333334433 45799999955411 111211 11222356777888888888887733 3
Q ss_pred eeeCCCCCCceEecCCCCeeEeecccceecc
Q 003481 590 IVHGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 590 ivHrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
+||+||+.-|||+. ++.+.|+|||-|....
T Consensus 188 LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 188 LVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred cccccchhhheEEE-CCeEEEEECccccccC
Confidence 99999999999999 8899999999876554
No 480
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.94 E-value=5.6e-05 Score=79.34 Aligned_cols=137 Identities=18% Similarity=0.133 Sum_probs=82.5
Q ss_pred eeeecc-eEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCC-CCceeeEeccccC--CccceeeccCCCchhhh
Q 003481 478 VGQGGF-GCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWSLVYEYLPNGSLQDR 553 (816)
Q Consensus 478 LG~G~~-g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~--~~~lV~E~~~~gsL~~~ 553 (816)
|-.|.+ ..||+....+..+.+|+..... ...+.+|+.++..+. +--+.++++++.. ..++||++++|.+|...
T Consensus 6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 445555 7899998777788889875543 234667888888873 3445566776643 47899999999877643
Q ss_pred hh-------------------hcCC-CCCCC--HHHHHHHHH--------------------HHHHHHHHHhhc----CC
Q 003481 554 LF-------------------RKSN-VSPLL--WKDRARIAA--------------------EIASGLCFLHSS----KP 587 (816)
Q Consensus 554 l~-------------------~~~~-~~~l~--~~~~~~i~~--------------------qia~aL~yLH~~----~~ 587 (816)
.. .... ..++. +...+.... .+...+..|-.. .+
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 21 1000 00111 001110000 011112222111 12
Q ss_pred CceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 588 EKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 588 ~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
..++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 459999999999999998778899998764
No 481
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.87 E-value=7.4e-05 Score=72.57 Aligned_cols=130 Identities=19% Similarity=0.206 Sum_probs=91.0
Q ss_pred CccceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccCCccceeeccCCCchhh
Q 003481 473 SESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWSLVYEYLPNGSLQD 552 (816)
Q Consensus 473 ~~~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~lV~E~~~~gsL~~ 552 (816)
.....||+|.+|.||+|.+.|..+|+|+-+.++ ....+..|.++|..+.--++.+=+.++. ..++.|||+.|-.|.+
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg-~~~i~me~i~G~~L~~ 101 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYG-EDFIRMEYIDGRPLGK 101 (201)
T ss_pred hhhhhhhcccccEEEEeeccCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEec-hhhhhhhhhcCcchhh
Confidence 344569999999999999999999999876554 3456888999999987666644332222 2345599999888876
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCC-CCceEecCCCCeeEeeccccee
Q 003481 553 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLK-PQNILLDSELSSKICDFGICRL 618 (816)
Q Consensus 553 ~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIk-p~NILl~~~~~vkL~DFGla~~ 618 (816)
.-... + .+-+..++..---|...| |-|+.|. |..++|..++.+.|+||..|+.
T Consensus 102 ~~~~~------~----rk~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 102 LEIGG------D----RKHLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhcc------c----HHHHHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 54321 1 122334555544455555 9999985 6666666666999999998863
No 482
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.84 E-value=2.9e-06 Score=95.89 Aligned_cols=186 Identities=20% Similarity=0.147 Sum_probs=131.0
Q ss_pred hcCCCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCc-eeeEecccc--CCccceeec
Q 003481 469 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPH-LVTLLGACP--EAWSLVYEY 544 (816)
Q Consensus 469 t~~f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~g~~~--~~~~lV~E~ 544 (816)
|.-+...+.+++|+++.+|+.+.. .+....+.+... ....-++++|.+++||| .+..++-+. +...+++++
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i 315 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRI 315 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhh
Confidence 333444456899999999998776 233334444322 34556889999999999 666666553 346789999
Q ss_pred cCCC-chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccceeccCCC
Q 003481 545 LPNG-SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 623 (816)
Q Consensus 545 ~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~ 623 (816)
+.++ +-........ ..+...+...+...-..+|++||+.. =+|+| ||+..+ +..++.||+....+....
T Consensus 316 ~s~~rs~~~~~~~se--~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~ 385 (829)
T KOG0576|consen 316 CSTGRSSALEMTVSE--IALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM 385 (829)
T ss_pred hcCCccccccCChhh--Hhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc
Confidence 9777 2222111110 11222334556777788999999964 48998 777755 689999999987776543
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHHHHHHhCCCCCC
Q 003481 624 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG 676 (816)
Q Consensus 624 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL~elltG~~Pf~ 676 (816)
......+|+.++|||+...+.+..+.|+|++|+--.++--|-+|-.
T Consensus 386 -------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 -------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred -------ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 3456779999999999999999999999999988778877877754
No 483
>PLN02876 acyl-CoA dehydrogenase
Probab=97.82 E-value=0.00016 Score=89.17 Aligned_cols=147 Identities=19% Similarity=0.275 Sum_probs=92.7
Q ss_pred cceeeeecceEEEEEEEcC----eEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCce--eeEeccccC-----Cccce
Q 003481 475 SFKVGQGGFGCVYKGEMLG----RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHL--VTLLGACPE-----AWSLV 541 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~g----~~vAiK~l~~~~~-~~~~~~~~E~~il~~l~-HpnI--v~l~g~~~~-----~~~lV 541 (816)
...|+.|.+..+|+....+ ..+++|+...... .....+.+|+.+|..+. |+++ .+++++|.+ ..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 4568999999999987763 4678887654322 23456889999999995 6665 777888754 47899
Q ss_pred eeccCCCchhhh-----------------------hhhcCC--------CCCCCH--HHHHHHH---------------H
Q 003481 542 YEYLPNGSLQDR-----------------------LFRKSN--------VSPLLW--KDRARIA---------------A 573 (816)
Q Consensus 542 ~E~~~~gsL~~~-----------------------l~~~~~--------~~~l~~--~~~~~i~---------------~ 573 (816)
|||++|..+.+. |+.... ..+..+ .++..|. -
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 999988654321 111000 001111 1121111 1
Q ss_pred HHHHHHHHHhhcCCC--------ceeeCCCCCCceEecCC-CC-eeEeecccceeccC
Q 003481 574 EIASGLCFLHSSKPE--------KIVHGDLKPQNILLDSE-LS-SKICDFGICRLVTE 621 (816)
Q Consensus 574 qia~aL~yLH~~~~~--------~ivHrDIkp~NILl~~~-~~-vkL~DFGla~~~~~ 621 (816)
.+...+.+|..+-|. .+||+|+++.|||++.+ +. +-|.||.++..-.+
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdP 260 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQ 260 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCCh
Confidence 233446677554432 49999999999999853 33 57999998876543
No 484
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.77 E-value=0.00013 Score=76.10 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=45.5
Q ss_pred ceeeeecce-EEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCC---ceeeEeccccC-----CccceeeccC
Q 003481 476 FKVGQGGFG-CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP---HLVTLLGACPE-----AWSLVYEYLP 546 (816)
Q Consensus 476 ~~LG~G~~g-~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~Hp---nIv~l~g~~~~-----~~~lV~E~~~ 546 (816)
..|+.||.. .||+. +..+++|..... .....+.+|..+|..+... .+.++++.... ..++||++++
T Consensus 3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL---GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc---CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 457877776 48875 346777875432 2344688899999887532 33444444322 2478999999
Q ss_pred CCchh
Q 003481 547 NGSLQ 551 (816)
Q Consensus 547 ~gsL~ 551 (816)
|.++.
T Consensus 78 G~~l~ 82 (235)
T cd05155 78 GETAT 82 (235)
T ss_pred CCCCC
Confidence 97774
No 485
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.72 E-value=8.9e-05 Score=78.50 Aligned_cols=138 Identities=18% Similarity=0.125 Sum_probs=80.6
Q ss_pred eeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCce-eeEeccccCCccceeeccCCCchhhh---
Q 003481 478 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL-VTLLGACPEAWSLVYEYLPNGSLQDR--- 553 (816)
Q Consensus 478 LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~g~~~~~~~lV~E~~~~gsL~~~--- 553 (816)
+..|-.+.+|+....+..+++|........-.....+|..++..+....+ .++++.+. .++||+|++|..+...
T Consensus 4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~--~~~v~e~i~G~~~~~~~~~ 81 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE--HWLLVEWLEGEVITLDQFV 81 (256)
T ss_pred CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC--CEEEEEeccCccccccccc
Confidence 55677889999887788899997654322211135678889988854333 34444443 4689999998766421
Q ss_pred --------------hhhcCC-CCCCCHHHH-HHHHHHH---------HHHHHHHhhc-----CCCceeeCCCCCCceEec
Q 003481 554 --------------LFRKSN-VSPLLWKDR-ARIAAEI---------ASGLCFLHSS-----KPEKIVHGDLKPQNILLD 603 (816)
Q Consensus 554 --------------l~~~~~-~~~l~~~~~-~~i~~qi---------a~aL~yLH~~-----~~~~ivHrDIkp~NILl~ 603 (816)
|+.... ..+++.... ..+..++ ...+..+-.. .+..++|+|+.|.||+++
T Consensus 82 ~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~ 161 (256)
T TIGR02721 82 ALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVT 161 (256)
T ss_pred CchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEe
Confidence 111110 112222211 1111111 1112222111 123589999999999999
Q ss_pred CCCCeeEeeccccee
Q 003481 604 SELSSKICDFGICRL 618 (816)
Q Consensus 604 ~~~~vkL~DFGla~~ 618 (816)
.++ +.|+||..|..
T Consensus 162 ~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 162 PQG-LKLIDWEYASD 175 (256)
T ss_pred CCC-CEEEeccccCc
Confidence 877 78999987754
No 486
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.
Probab=97.68 E-value=9.6e-05 Score=64.11 Aligned_cols=84 Identities=19% Similarity=0.264 Sum_probs=69.0
Q ss_pred EEEEecCCcccchhhHHHHhhccCCCCcEEEEEecCCCCCCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003481 25 VYVALGKCVEKGLSLLHWTLQRFGSSREICILHVHQPSPVIPTLLGKLPASQASAEVLSAFRAEERQKMKKLLDNYLRIC 104 (816)
Q Consensus 25 VlVavD~s~~~s~~Al~wal~~~~~~~~v~lvHV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~c 104 (816)
|+||++|... |..++.||......+..++.+|+.
T Consensus 1 ilv~~sgg~d-S~~~l~~~~~~~~~~~~~~~~~~~--------------------------------------------- 34 (86)
T cd01984 1 ILVALSGGLD-SSVLLHLAKRLKSGGPEVVALVVV--------------------------------------------- 34 (86)
T ss_pred CEEEeeCCHH-HHHHHHHHHHHHhcCCCEEEEEeH---------------------------------------------
Confidence 6899999666 878999998875334567677665
Q ss_pred HHhccceEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCcchhhcCC-cchhhhhhcCCCCceEEE
Q 003481 105 VEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGS-RKASYAAKNAPMFCEIWF 171 (816)
Q Consensus 105 ~~~~v~~~~~v~e~~d~~~~Iv~~a~~~~id~lVmGs~g~~~~~R~~~g-sVs~~V~~~ap~~C~V~v 171 (816)
-..+.+.++++++++|.||+|+++.....+.++| +++.++++.++ |+|+.
T Consensus 35 ---------------~~~~~~~~~a~~~~~~~Iv~G~~~~d~~~~~~~~~~~~~~~~~~~~--~~vl~ 85 (86)
T cd01984 35 ---------------AFVRILKRLAAEEGADVIILGHNADDVAGRRLGASANVLVVIKGAG--IPVLT 85 (86)
T ss_pred ---------------HHHHHHHHHHHHcCCCEEEEcCCchhhhhhccCchhhhhhcccccC--CceeC
Confidence 3457788899999999999999999999988888 89999999999 88763
No 487
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.60 E-value=0.00034 Score=72.86 Aligned_cols=139 Identities=19% Similarity=0.288 Sum_probs=81.8
Q ss_pred ceeeeecceEEEEEEEc---CeEEEEEEeccCCcccHHHHHHHHHHHhcCCC-CceeeEeccccCCccceeeccCCCchh
Q 003481 476 FKVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH-PHLVTLLGACPEAWSLVYEYLPNGSLQ 551 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~---g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~g~~~~~~~lV~E~~~~gsL~ 551 (816)
..|..|-...+|+.... +..|++|+....... .....+|+.++..+.. .-..++++.+. ..+||||++|.++.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~~~l~e~i~G~~l~ 80 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ--NGLIYEFIPGRTLE 80 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC--CcEEEEeeCCCcCC
Confidence 45778888899998775 578999976543221 1223478888888843 33445555443 35899999987763
Q ss_pred hh-----------------hhhcCCC---------CCCCHHHHHHHHHH----------------------HHHHHHH--
Q 003481 552 DR-----------------LFRKSNV---------SPLLWKDRARIAAE----------------------IASGLCF-- 581 (816)
Q Consensus 552 ~~-----------------l~~~~~~---------~~l~~~~~~~i~~q----------------------ia~aL~y-- 581 (816)
.. |+..... ..-.|..+..+... +...+..
T Consensus 81 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 160 (235)
T cd05157 81 PEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLK 160 (235)
T ss_pred HHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHHH
Confidence 21 1111110 11112222222111 1111111
Q ss_pred --Hhhc-CCCceeeCCCCCCceEecC-CCCeeEeecccce
Q 003481 582 --LHSS-KPEKIVHGDLKPQNILLDS-ELSSKICDFGICR 617 (816)
Q Consensus 582 --LH~~-~~~~ivHrDIkp~NILl~~-~~~vkL~DFGla~ 617 (816)
+-.. .+..++|+|+.|.|||++. ++.+.|+||..|.
T Consensus 161 ~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 161 ELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred HHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 2221 2346999999999999998 5789999998764
No 488
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.53 E-value=0.00089 Score=74.87 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=55.1
Q ss_pred ceeeeecceEEEEEEEcC--eEEEEEEeccC------C-cccHHHHHHHHHHHhcCC---CCceeeEeccccCCccceee
Q 003481 476 FKVGQGGFGCVYKGEMLG--RTVAIKMLYSH------N-MQGQLEFQQEVRVLSKLQ---HPHLVTLLGACPEAWSLVYE 543 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~g--~~vAiK~l~~~------~-~~~~~~~~~E~~il~~l~---HpnIv~l~g~~~~~~~lV~E 543 (816)
+.||.|.+..||++...+ +.|+||.-.+. . .-....+..|.+.|..+. -.++.+++.+..+..++|||
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME 111 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVME 111 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEe
Confidence 468999999999999874 48999984321 1 224456778888888762 34677888887777899999
Q ss_pred ccCCCc
Q 003481 544 YLPNGS 549 (816)
Q Consensus 544 ~~~~gs 549 (816)
|+++..
T Consensus 112 ~L~~~~ 117 (401)
T PRK09550 112 DLSDHK 117 (401)
T ss_pred cCCCcc
Confidence 998743
No 489
>PRK10593 hypothetical protein; Provisional
Probab=97.53 E-value=0.0007 Score=73.34 Aligned_cols=73 Identities=19% Similarity=0.050 Sum_probs=54.4
Q ss_pred ceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCC---CceeeEecccc-----CCccceeeccCC
Q 003481 476 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH---PHLVTLLGACP-----EAWSLVYEYLPN 547 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~H---pnIv~l~g~~~-----~~~~lV~E~~~~ 547 (816)
..||.|..+.||.....+..+.+|..+.. .....|..|...|..|.- -.+.+++++|. +..+||||++++
T Consensus 20 ~~i~~G~~~~vy~~~~~~~~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G 97 (297)
T PRK10593 20 ECISEQPYAALWALYDSQGNPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG 97 (297)
T ss_pred eecCCccceeEEEEEcCCCCEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence 45999999999998876556777875331 123478899999988843 35777887763 347999999998
Q ss_pred Cch
Q 003481 548 GSL 550 (816)
Q Consensus 548 gsL 550 (816)
+++
T Consensus 98 ~~~ 100 (297)
T PRK10593 98 VSV 100 (297)
T ss_pred Eec
Confidence 765
No 490
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.53 E-value=0.00052 Score=68.95 Aligned_cols=132 Identities=27% Similarity=0.382 Sum_probs=94.0
Q ss_pred cCcccCHHHHHHHhcCCCccceeeeecc-eEEEEEEEcCeEEEEEEecc---CCc-------c-----------cHHHHH
Q 003481 456 ESAEFSLADLQTATCNFSESFKVGQGGF-GCVYKGEMLGRTVAIKMLYS---HNM-------Q-----------GQLEFQ 513 (816)
Q Consensus 456 ~~~~~~~~el~~~t~~f~~~~~LG~G~~-g~Vy~~~~~g~~vAiK~l~~---~~~-------~-----------~~~~~~ 513 (816)
....|+. -+.+++..+.||.|.- |.||+++..|..+|||++.. ... . ...-|.
T Consensus 28 KL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~ 102 (207)
T PF13095_consen 28 KLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFN 102 (207)
T ss_pred CcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHH
Confidence 3445555 3378899999999999 99999999999999999422 111 0 012478
Q ss_pred HHHHHHhcCC---CCce--eeEeccc--c-CC-----------------ccceeeccCCCchhhhhhhcCCCCCCCHHHH
Q 003481 514 QEVRVLSKLQ---HPHL--VTLLGAC--P-EA-----------------WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDR 568 (816)
Q Consensus 514 ~E~~il~~l~---HpnI--v~l~g~~--~-~~-----------------~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~ 568 (816)
.|.+...+|+ +.++ |+.+||. . +. +.||.||++... .+.
T Consensus 103 ~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~---- 166 (207)
T PF13095_consen 103 CECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ---- 166 (207)
T ss_pred HHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----
Confidence 8999988884 4455 8999986 1 00 246777765532 111
Q ss_pred HHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecCCCCeeEeecccc
Q 003481 569 ARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 616 (816)
Q Consensus 569 ~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~~~~vkL~DFGla 616 (816)
..-+.+|.+-|..+|..+ |+-+|+++.|.. .-||+|||.+
T Consensus 167 ~~~~~~~~~dl~~~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 167 IRDIPQMLRDLKILHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred hhHHHHHHHHHHHHHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 233567778889999988 999999999985 3589999864
No 491
>PRK05231 homoserine kinase; Provisional
Probab=97.51 E-value=0.0009 Score=73.24 Aligned_cols=155 Identities=17% Similarity=0.225 Sum_probs=83.8
Q ss_pred cCHHHHHHHhcCCCc-----cceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCC-----CCceee
Q 003481 460 FSLADLQTATCNFSE-----SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-----HPHLVT 529 (816)
Q Consensus 460 ~~~~el~~~t~~f~~-----~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~-----HpnIv~ 529 (816)
++..++...-..|.. .+.|+.|....+|+....+..+++|++... ....+..|+.++..|. .|.++.
T Consensus 7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i~ 83 (319)
T PRK05231 7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPVA 83 (319)
T ss_pred CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCCcEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCccee
Confidence 445555554445543 345667777899998877668999987521 2223334555555542 333332
Q ss_pred E-----eccccCCccceeeccCCCchhh-----------h---hhhcC-C-------CCCCCH-HHHHH-----------
Q 003481 530 L-----LGACPEAWSLVYEYLPNGSLQD-----------R---LFRKS-N-------VSPLLW-KDRAR----------- 570 (816)
Q Consensus 530 l-----~g~~~~~~~lV~E~~~~gsL~~-----------~---l~~~~-~-------~~~l~~-~~~~~----------- 570 (816)
- +....+..+++++|++|..+.. . |+... . ...+.| .....
T Consensus 84 ~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T PRK05231 84 RRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQA 163 (319)
T ss_pred CCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHH
Confidence 1 1112334689999999875421 1 11110 0 011112 22111
Q ss_pred -HHHH-HHHHHHHHhhc----CCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 571 -IAAE-IASGLCFLHSS----KPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 571 -i~~q-ia~aL~yLH~~----~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.+.+ +...+..+... -|.++||+|+.|.|||++.+...-|+||+.+.
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 164 ALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1111 11122333211 24579999999999999976556899999764
No 492
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.46 E-value=0.00045 Score=74.68 Aligned_cols=140 Identities=17% Similarity=0.178 Sum_probs=85.5
Q ss_pred cceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCC--ceeeEeccc--------cCCccceeec
Q 003481 475 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP--HLVTLLGAC--------PEAWSLVYEY 544 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~g~~--------~~~~~lV~E~ 544 (816)
...|..|....+|+....+..+++|+... .....+..|+.++..+.+. .+.+++... .+..++|++|
T Consensus 19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEeCCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 44577787889999887777899998764 2334566778887777432 244444322 2345789999
Q ss_pred cCCCchhh----h----------hhhcC-C-------CCCCCHHHHH----------HHHHHHHHHHHHHhh----cCCC
Q 003481 545 LPNGSLQD----R----------LFRKS-N-------VSPLLWKDRA----------RIAAEIASGLCFLHS----SKPE 588 (816)
Q Consensus 545 ~~~gsL~~----~----------l~~~~-~-------~~~l~~~~~~----------~i~~qia~aL~yLH~----~~~~ 588 (816)
++|..+.. . |+... . .....|.... .....+..++.++.. ..+.
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 99877532 0 11100 0 0112232211 011223344555553 1234
Q ss_pred ceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 589 KIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 589 ~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 69999999999999988777899998764
No 493
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.43 E-value=0.0013 Score=66.42 Aligned_cols=129 Identities=22% Similarity=0.289 Sum_probs=86.6
Q ss_pred cceeeeecceEEEEEEEcCeEEEEEEeccCC----------------cccHHHHHHHHHHHhcCC------CCceeeEec
Q 003481 475 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHN----------------MQGQLEFQQEVRVLSKLQ------HPHLVTLLG 532 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~----------------~~~~~~~~~E~~il~~l~------HpnIv~l~g 532 (816)
...||+|+.=.||.--. +....||+..... .....++.+|+.-...+. +.+|.+++|
T Consensus 6 ~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G 84 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG 84 (199)
T ss_pred CcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence 45699999999996433 3456788887665 122445667777666665 889999999
Q ss_pred cccC--CccceeeccCC------CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeCCCCCCceEecC
Q 003481 533 ACPE--AWSLVYEYLPN------GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS 604 (816)
Q Consensus 533 ~~~~--~~~lV~E~~~~------gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ivHrDIkp~NILl~~ 604 (816)
+... +..+|+|.+.+ -+|.+++... .++. . +...+-.-..||-.++ |+.+||+|.||++..
T Consensus 85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~----~~~~-~---~~~~L~~f~~~l~~~~---Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEG----GLTE-E---LRQALDEFKRYLLDHH---IVIRDLNPHNIVVQR 153 (199)
T ss_pred EEecCCceEEEEEEEECCCCCcCccHHHHHHcC----CccH-H---HHHHHHHHHHHHHHcC---CeecCCCcccEEEEe
Confidence 9854 46788887643 2577777433 2443 3 3333444456777766 999999999999954
Q ss_pred C--C--CeeEee-ccc
Q 003481 605 E--L--SSKICD-FGI 615 (816)
Q Consensus 605 ~--~--~vkL~D-FGl 615 (816)
+ + .+.|+| ||.
T Consensus 154 ~~~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 154 RDSGEFRLVLIDGLGE 169 (199)
T ss_pred cCCCceEEEEEeCCCC
Confidence 3 2 477777 453
No 494
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.37 E-value=0.0014 Score=71.37 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=81.8
Q ss_pred cceeeeecceEEEEEEEcCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCC--ceeeEeccc--------cCCccceeec
Q 003481 475 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP--HLVTLLGAC--------PEAWSLVYEY 544 (816)
Q Consensus 475 ~~~LG~G~~g~Vy~~~~~g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~Hp--nIv~l~g~~--------~~~~~lV~E~ 544 (816)
...++.|....+|+....+..+++|+..... ....+..|+.++..|... .+.+++... .+..+++++|
T Consensus 27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVGRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEeCCCcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 3456677778999987766678899875432 223445667777666322 234444322 2336789999
Q ss_pred cCCCchhh--------------hhhhcCC-C-C-------CCCHHHHHH------------HHHHHHHHHHHHhh----c
Q 003481 545 LPNGSLQD--------------RLFRKSN-V-S-------PLLWKDRAR------------IAAEIASGLCFLHS----S 585 (816)
Q Consensus 545 ~~~gsL~~--------------~l~~~~~-~-~-------~l~~~~~~~------------i~~qia~aL~yLH~----~ 585 (816)
++|..+.. .++.... . . .-.|..... ....+...+.++.. .
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 98865421 0111100 0 0 012221110 01123344555543 2
Q ss_pred CCCceeeCCCCCCceEecCCCCeeEeecccce
Q 003481 586 KPEKIVHGDLKPQNILLDSELSSKICDFGICR 617 (816)
Q Consensus 586 ~~~~ivHrDIkp~NILl~~~~~vkL~DFGla~ 617 (816)
.+.+++|+|+++.||+++.++.+.|+||+.+.
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 24679999999999999988777899998763
No 495
>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]
Probab=97.35 E-value=0.00014 Score=73.10 Aligned_cols=75 Identities=29% Similarity=0.546 Sum_probs=70.5
Q ss_pred ccCCCCCccccchhhhhcCCCCccCCCccccccchhhhhccCCCCCCccccccCcCCCCCcHHHHHHHHHHHhhC
Q 003481 742 EERPVPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDWLCKS 816 (816)
Q Consensus 742 ~~~~~p~~~~~pilqeim~dP~~~~dg~t~~~~~i~~~l~~g~~~sp~t~~~l~~~~l~pn~~lr~~~~~~~~~~ 816 (816)
....+|.+..+.|..++|.+|.++++|.||+...|.+++.....+.|.|.-++...+++||.+|+.+|-.|+..|
T Consensus 204 k~rEvpd~lcgkIt~el~~~pvi~psgIty~ra~I~Ehl~rvghfdpvtr~~Lte~q~ipN~alkevIa~fl~~n 278 (284)
T KOG4642|consen 204 KKREVPDYLCGKITLELMREPVITPSGITYDRADIEEHLQRVGHFDPVTRWPLTEYQLIPNLALKEVIAAFLKEN 278 (284)
T ss_pred ccccccchhhhhhhHHhhcCCccCccccchhHHHHHHHHHHhccCCchhcccCCHHhhccchHHHHHHHHHHHhc
Confidence 346789999999999999999999999999999999999998999999999999999999999999999999764
No 496
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.31 E-value=0.0012 Score=71.63 Aligned_cols=139 Identities=24% Similarity=0.339 Sum_probs=83.0
Q ss_pred ceeeeecceEEEEEEEc--------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCc-eeeEeccccCCccceeeccC
Q 003481 476 FKVGQGGFGCVYKGEML--------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPH-LVTLLGACPEAWSLVYEYLP 546 (816)
Q Consensus 476 ~~LG~G~~g~Vy~~~~~--------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~Hpn-Iv~l~g~~~~~~~lV~E~~~ 546 (816)
+.|..|-...+|+.... +..+++|+..... .......+|..++..+...+ ..++++++.+ .+|++|++
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~--~~v~e~i~ 80 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN--GRIEEFIP 80 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC--CchhheeC
Confidence 34666777789988765 3789999975543 22234567888888884333 3455666643 46899998
Q ss_pred CCchhhh-----------------hhhcCCC--------CCCCHHHHHHH--------------------------HHHH
Q 003481 547 NGSLQDR-----------------LFRKSNV--------SPLLWKDRARI--------------------------AAEI 575 (816)
Q Consensus 547 ~gsL~~~-----------------l~~~~~~--------~~l~~~~~~~i--------------------------~~qi 575 (816)
|..+... |+..... .+.-|.....+ ...+
T Consensus 81 G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (302)
T cd05156 81 SRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDE 160 (302)
T ss_pred CCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHH
Confidence 8776431 1111100 01111111111 1122
Q ss_pred HHHHHHHhh------cCCCceeeCCCCCCceEecCC----CCeeEeecccce
Q 003481 576 ASGLCFLHS------SKPEKIVHGDLKPQNILLDSE----LSSKICDFGICR 617 (816)
Q Consensus 576 a~aL~yLH~------~~~~~ivHrDIkp~NILl~~~----~~vkL~DFGla~ 617 (816)
...+.+|-. ..+..++|+|+.|.|||++.+ +.+.|+||..|.
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 161 AKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 223344432 234569999999999999985 889999998764
No 497
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.30 E-value=0.00067 Score=82.28 Aligned_cols=197 Identities=20% Similarity=0.194 Sum_probs=135.5
Q ss_pred HHHHHHHhcCCCCceeeEeccccCC------ccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Q 003481 513 QQEVRVLSKLQHPHLVTLLGACPEA------WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 586 (816)
Q Consensus 513 ~~E~~il~~l~HpnIv~l~g~~~~~------~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~ 586 (816)
.-|...+.++.|+|++.+++|.-+. ..+.-+++..-++...+.... .++....+.+..++..||.|+|+..
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~---~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG---SIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc---ccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 3567778888999999999886332 234567888888888776543 5777888899999999999999975
Q ss_pred CCceeeCCCCCC---ceEecCCCCeeEe--ecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCc--chhHh
Q 003481 587 PEKIVHGDLKPQ---NILLDSELSSKIC--DFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTP--KSDSY 659 (816)
Q Consensus 587 ~~~ivHrDIkp~---NILl~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~--ksDVw 659 (816)
..|.-+..+ +...+..+.+.++ ||+..+....... .....-+..|.+||......+.. ..|+|
T Consensus 307 ---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-------~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~ 376 (1351)
T KOG1035|consen 307 ---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-------SFSDLLAEIRNADEDLKENTAKKSRLTDLW 376 (1351)
T ss_pred ---cceeEEecccccccccCccceeecchhhhcccccCCCccc-------chhhcCccccccccccccccchhhhhhHHH
Confidence 555555444 4445566777777 9988877655432 12233455688888776555544 47999
Q ss_pred HHHHHHHHHHhCCCCCCChHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 003481 660 SFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 738 (816)
Q Consensus 660 SlGviL~elltG~~Pf~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~e~l~~~Le~l 738 (816)
.+|..+..+..|..+-...... ..+++. ... ..+.+...+|+..++++|++..+.+.+.+...
T Consensus 377 ~lgll~~~~~~~~~i~~~~~~~---------~~~l~~---~~~----~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKSAVP---------VSLLDV---LST----SELLDALPKCLDEDSEERLSALELLTHPFLRF 439 (1351)
T ss_pred HHHHHHhhhhhcCcccccccch---------hhhhcc---ccc----hhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence 9999999999988664321111 111111 011 15677888999999999999997776666543
No 498
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.22 E-value=8.1e-05 Score=91.42 Aligned_cols=158 Identities=13% Similarity=-0.057 Sum_probs=118.4
Q ss_pred HHHHHHHhcCCCCceeeEecccc----CCccceeeccCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 003481 513 QQEVRVLSKLQHPHLVTLLGACP----EAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKP 587 (816)
Q Consensus 513 ~~E~~il~~l~HpnIv~l~g~~~----~~~~lV~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~ 587 (816)
..|.+.++...|+++...+.-.+ ...+.+++|+.+|.+.+.|.+.. ..++++..-+.....+...+..-+|+...
T Consensus 1277 l~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tn 1356 (2724)
T KOG1826|consen 1277 LSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTN 1356 (2724)
T ss_pred hhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhccc
Confidence 34555666678999887665442 24688999999999999887653 33444444444444443666666665432
Q ss_pred --CceeeCCCCCCceEecCCCCeeEeecccceeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHhHHHHHH
Q 003481 588 --EKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLII 665 (816)
Q Consensus 588 --~~ivHrDIkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~ksDVwSlGviL 665 (816)
.-.+|+++|+-|.+|..+.++|++++|+.+...+... ......+++.|+.|++.+.-.++.++|+|..|+.+
T Consensus 1357 lg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~s------f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~l 1430 (2724)
T KOG1826|consen 1357 LGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLS------FFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSL 1430 (2724)
T ss_pred CCccchhhhhhhhccceecCCcccccccccccccCchHh------hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3478999999999999999999999999995444332 23556788899999999888899899999999999
Q ss_pred HHHHhCCCCCC
Q 003481 666 LQLLTGRLPVG 676 (816)
Q Consensus 666 ~elltG~~Pf~ 676 (816)
|.+.-|..+|-
T Consensus 1431 y~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1431 YLRSDGNAYFI 1441 (2724)
T ss_pred HHHhcccHHHH
Confidence 99999998873
No 499
>PLN02236 choline kinase
Probab=96.98 E-value=0.0045 Score=68.49 Aligned_cols=138 Identities=19% Similarity=0.250 Sum_probs=82.6
Q ss_pred eeeeecceEEEEEEEc------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCce-eeEeccccCCccceeeccCCCc
Q 003481 477 KVGQGGFGCVYKGEML------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL-VTLLGACPEAWSLVYEYLPNGS 549 (816)
Q Consensus 477 ~LG~G~~g~Vy~~~~~------g~~vAiK~l~~~~~~~~~~~~~E~~il~~l~HpnI-v~l~g~~~~~~~lV~E~~~~gs 549 (816)
.|-.|-...+|+.... +..|++|+......... .-.+|..++..+..-++ .++++.+.++ .|++|+++.+
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g--~v~efi~g~~ 119 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG--RVEEFIHART 119 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECCc--eEEEeeCCCC
Confidence 4555777889988753 36799998765432222 23578888888854444 4566766544 6899998777
Q ss_pred hhhh-----------------hhhcC---CCCCCCHHHHHHHHHHH-----------------HHHHHHH----hh-cCC
Q 003481 550 LQDR-----------------LFRKS---NVSPLLWKDRARIAAEI-----------------ASGLCFL----HS-SKP 587 (816)
Q Consensus 550 L~~~-----------------l~~~~---~~~~l~~~~~~~i~~qi-----------------a~aL~yL----H~-~~~ 587 (816)
|... ++... ......|..+.++..++ ...+..| .. ..+
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 6421 11111 01122344444443222 1112222 22 223
Q ss_pred CceeeCCCCCCceEecC-CCCeeEeecccce
Q 003481 588 EKIVHGDLKPQNILLDS-ELSSKICDFGICR 617 (816)
Q Consensus 588 ~~ivHrDIkp~NILl~~-~~~vkL~DFGla~ 617 (816)
..++|+|+++.|||++. ++.+.|+||..+.
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 45899999999999986 4689999998764
No 500
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.89 E-value=0.00092 Score=70.81 Aligned_cols=147 Identities=15% Similarity=0.183 Sum_probs=99.1
Q ss_pred cCHHHHHHHhcC---CCccceeeeecceEEEEEEEc-CeEEEEEEeccCCcc----------------------cHHHHH
Q 003481 460 FSLADLQTATCN---FSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ----------------------GQLEFQ 513 (816)
Q Consensus 460 ~~~~el~~~t~~---f~~~~~LG~G~~g~Vy~~~~~-g~~vAiK~l~~~~~~----------------------~~~~~~ 513 (816)
+.+--|.+..++ ++.+++||-|.-+.||.+-+. |++.++|.-+..... ......
T Consensus 79 yDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~ 158 (465)
T KOG2268|consen 79 YDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAAT 158 (465)
T ss_pred chHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHH
Confidence 445555555544 678899999999999999887 999999964322110 011234
Q ss_pred HHHHHHhcCC-CC-ceeeEeccccCCccceeeccCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcee
Q 003481 514 QEVRVLSKLQ-HP-HLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 591 (816)
Q Consensus 514 ~E~~il~~l~-Hp-nIv~l~g~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iv 591 (816)
+|...|+.|. |. -+.+.++++ ..++|||++.+..|...-.-.. .-.+...+..-+--|-.+| +|
T Consensus 159 kEfafmkaL~e~gfpVPkpiD~~--RH~Vvmelv~g~Pl~~v~~v~d---------~~~ly~~lm~~Iv~la~~G---lI 224 (465)
T KOG2268|consen 159 KEFAFMKALYERGFPVPKPIDHN--RHCVVMELVDGYPLRQVRHVED---------PPTLYDDLMGLIVRLANHG---LI 224 (465)
T ss_pred HHHHHHHHHHHcCCCCCCccccc--ceeeHHHhhcccceeeeeecCC---------hHHHHHHHHHHHHHHHHcC---ce
Confidence 6777777773 22 233444443 4579999999888866432111 2234445555566677777 99
Q ss_pred eCCCCCCceEecCCCCeeEeecccceecc
Q 003481 592 HGDLKPQNILLDSELSSKICDFGICRLVT 620 (816)
Q Consensus 592 HrDIkp~NILl~~~~~vkL~DFGla~~~~ 620 (816)
|+|..--||+++.++.++++||--+....
T Consensus 225 HgDFNEFNimv~dd~~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 225 HGDFNEFNIMVKDDDKIVVIDFPQMVSTS 253 (465)
T ss_pred ecccchheeEEecCCCEEEeechHhhccC
Confidence 99999999999999999999997654443
Done!