Query 003490
Match_columns 816
No_of_seqs 305 out of 1546
Neff 5.8
Searched_HMMs 29240
Date Tue Mar 26 22:59:20 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/003490.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_117-121//hhsearch_pdb/003490hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e8d_A Glycosyl hydrolase, fam 1.0 1 1 1139.5 48.0 552 26-727 2-585 (595)
2 3thd_A Beta-galactosidase; TIM 1.0 1 1 1125.4 47.6 566 24-727 7-619 (654)
3 1tg7_A Beta-galactosidase; TIM 1.0 1 1 1092.0 48.0 661 25-727 3-947 (971)
4 3d3a_A Beta-galactosidase; pro 1.0 1 1 1081.8 50.5 563 25-727 5-587 (612)
5 3og2_A Beta-galactosidase; TIM 1.0 1 1 958.9 54.5 658 24-726 22-978 (1003)
6 3u7v_A Beta-galactosidase; str 1.0 1 1 305.3 13.9 170 24-208 40-225 (552)
7 1vem_A Beta-amylase; beta-alph 1.0 1 1 214.2 6.3 240 40-303 12-296 (516)
8 3tty_A Beta-GAL, beta-galactos 1.0 1 1 209.4 21.8 286 40-347 6-390 (675)
9 1kwg_A Beta-galactosidase; TIM 1.0 1 1 203.9 20.2 269 44-343 1-390 (645)
10 3pzg_A Mannan endo-1,4-beta-ma 1.0 1 1 167.0 11.1 180 30-216 15-220 (383)
No 1
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=1.00 E-value=1 Score=1139.50 Aligned_cols=552 Identities=28% Similarity=0.526 Sum_probs=457.2
Q ss_pred EEEEEECCEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCCHHHHHHHHH
Q ss_conf 14999157099989796999998629999975699999999987998899610056447889603331610099999999
Q 003490 26 CSVTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTI 105 (816)
Q Consensus 26 ~~v~~d~~~~~idG~~~~l~sG~iHy~R~~~e~W~d~l~k~K~~GlNtV~tyvfWn~hEp~~G~ydF~G~~dl~~fl~la 105 (816)
.+++++ ++|++||+|++++||++||+|+||++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||++|
T Consensus 2 ~~F~i~-~~f~~dG~p~~i~~G~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a 80 (595)
T 4e8d_A 2 TRFEIR-DDFYLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIA 80 (595)
T ss_dssp CCEEES-SSEEETTEECCCEEEEECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHH
T ss_pred CEEEEC-CEEEECCEEEEEEEEEECHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHHHHH
T ss_conf 707967-7799999898998998572229999999999999973997799853678708988754134636699999999
Q ss_pred HHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
Q ss_conf 98297899821822000118898873115459847524996679999999999999977066331369855986124434
Q 003490 106 QKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEY 185 (816)
Q Consensus 106 ~e~GL~Vilr~GPYicaEw~~GG~P~WL~~~p~i~~Rt~~~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEy 185 (816)
+++||+|||||||||||||++||+|.||.++| +++|++|+.|++++++|+++|+++++ ++++++||||||+||||||
T Consensus 81 ~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEy 157 (595)
T 4e8d_A 81 QDLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV--PRLLDNGGNILMMQVENEY 157 (595)
T ss_dssp HHTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSG
T ss_pred HHCCCEEEEECCCCEECCCCCCCCCHHHCCCC-CEECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEECCCCC
T ss_conf 98699899704774301217782775550687-45315897999999999999999998--8741069988999755434
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCC-------CC--CCCCCCCC-CCCC-CCC------CCCCCCC-
Q ss_conf 54221248233889999999999829974225417878-------99--75322788-8756-777------8799999-
Q 003490 186 GAQSKLLGAAGHNYMTWAAKMAVEMGTGVPWVMCKEED-------AP--DPVINSCN-GFYC-DAF------TPNQPYK- 247 (816)
Q Consensus 186 g~~~~~y~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~-------~p--~~vi~t~n-g~~~-~~~------~~~~p~~- 247 (816)
|++ + ++++||+||+++++++|++|||+||++.+ +. +++++||| |.+| +.| .+++|++
T Consensus 158 G~~----~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~ 232 (595)
T 4e8d_A 158 GSY----G-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKW 232 (595)
T ss_dssp GGT----C-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCC
T ss_pred CCC----C-CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 665----7-71899999999999759967899825951310458853788837776179856676778887630389999
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCC----C---CCCCCCCCCCCC
Q ss_conf 916531156434444898776897899999999998198233444752467889779999----7---334677899878
Q 003490 248 PTIWTEAWSGWFTEFGGPIHQRPVQDLAFAAARFIQKGGSFINYYMYHGGTNFGRSAGGP----F---ITTSYDYDAPID 320 (816)
Q Consensus 248 P~~~tE~~~Gwf~~wG~~~~~r~~e~~~~~~~~~~~~g~s~~NyYM~hGGTNfG~~~G~~----~---~~TSYDYdApl~ 320 (816)
|+||+|||+|||++||++++.|++++++..++++++.| | +||||||||||||||+|++ + ++|||||||||+
T Consensus 233 P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g-s-~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~ 310 (595)
T 4e8d_A 233 PLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG-S-INLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLD 310 (595)
T ss_dssp CCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS-E-EEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-C-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 80898631654455699877789999999999999769-9-549855453272424687777777778777667798058
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCEEECCCCC
Q ss_conf 67988862379999999999763302357998324589863113302689850257520477642499962602016995
Q 003490 321 EYGLIRQPKYGHLKELHRAIKMCERALVSADPIVTSLGGFQQAHVYSSESGDCAAFLSNYDTKSAARVLFNNMHYNLPPW 400 (816)
Q Consensus 321 E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~fl~n~~~~~~~~v~f~~~~~~~p~~ 400 (816)
|+|++ +|||.++|+++..+. .+..... |.. .+...|. +|.+..
T Consensus 311 E~G~~-t~Ky~~lr~~i~~~~--~~~p~~~-P~~------~~~~~~~-------------------~v~l~~-------- 353 (595)
T 4e8d_A 311 EEGNP-TAKYLAVKKMMATHF--SEYPQLE-PLY------KESMELD-------------------AIPLVE-------- 353 (595)
T ss_dssp TTSCB-CHHHHHHHHHHHHHC--TTSCCCC-CCC------CCBCCEE-------------------EEEEEE--------
T ss_pred CCCCC-CHHHHHHHHHHHHHC--CCCCCCC-CCC------CCCCCCC-------------------EEEECC--------
T ss_conf 67783-478999999999747--7999999-987------7643565-------------------087504--------
Q ss_pred CEEECCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEE
Q ss_conf 112138986112102110110221112322112234443---33343247899865555300100587998547999999
Q 003490 401 SISVLPDCRNVVFNTAKVGVQTSQMEMLPANAEMFSWES---YFEDISSLDDSSTFTTQGLLEQINVTRDASDYLWYITS 477 (816)
Q Consensus 401 svsil~dc~~v~f~ta~v~~q~~~~~~~~~~~~~~~w~~---~~e~~~~~~~~~~~~~~~~~Eql~~t~d~sgYlwY~T~ 477 (816)
....|+. +.+|+.+ ..|. +||+++| .+||++|||+
T Consensus 354 --------------------------------~~~L~~~l~~l~~~~~s---~~P~----~mE~lgq---~~GyvlY~t~ 391 (595)
T 4e8d_A 354 --------------------------------KVSLFETLDSLSSPVES---LYPQ----KMEELGQ---SYGYLLYRTE 391 (595)
T ss_dssp --------------------------------EEEHHHHHHHHCCCEEE---SSCC----BTGGGTC---CSSEEEEEEE
T ss_pred --------------------------------CCCHHHHHHHCCCCCCC---CCCC----CHHHCCC---CCCEEEEEEC
T ss_conf --------------------------------15489966550776436---9988----9889299---7675999822
Q ss_pred ECCCCCCCCCCCCCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEEEEEECCCCC-CEEEEEEECCCCCCCCCCC
Q ss_conf 518999644468987548838944399999999999999753344203898565306997-5799998537964555687
Q 003490 478 VDIGSSESFLHGGELPTLIVQSTGHALHIFINGQLSGSAFGTREARRFMYTGKVNLRAGR-NKIALLSVAVGLPNVGGHY 556 (816)
Q Consensus 478 v~~~~~~~~~~~g~~~~L~v~~~~d~~~vfVNg~~iG~~~g~~~~~~~~~~~~i~l~~G~-n~L~iLve~~Gr~N~G~~~ 556 (816)
+..... ...|++.+++|+++|||||+++|++++..... ++ +++...+. ++|+||||||||+|||+.+
T Consensus 392 i~~~~~--------~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~--~i--~~~~~~~~~~~L~ILVEN~GRvNyG~~~ 459 (595)
T 4e8d_A 392 TNWDAE--------EERLRIIDGRDRAQLYVDGQWVKTQYQTEIGE--DI--FYQGKKKGLSRLDILIENMGRVNYGHKF 459 (595)
T ss_dssp EECSSS--------SEEEEEEEEESEEEEEETTEEEEEEEGGGTTS--CE--EECCCSSSEEEEEEEEECCCCCCSGGGT
T ss_pred CCCCCC--------CCEEECCCCCEEEEEEECCEEEEEEECCCCCC--EE--EEECCCCCCCEEEEEEECCCCCCCCCCC
T ss_conf 688888--------73463278744899998997999997456761--47--8535778877899999858975167556
Q ss_pred --CCCCCCCCCCEEEECCCCCCCCCCCCCCE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
Q ss_conf --84454310247970346885247548927-961585211335588988875323233222258883499999868999
Q 003490 557 --ETWNTGILGPVALHGLDQGKWDLSWQKWT-YQVGLRGEAMNLVSPNGISSVEWMQASLAVQRQQPLMWHKAYFNAPEG 633 (816)
Q Consensus 557 --e~~~kGI~G~V~l~g~~~g~~dLs~~~W~-y~vgL~gE~~~~~~~~~~~~~~W~~~~~~~~~~~~~twYkt~F~~p~g 633 (816)
++++|||+|+|+|++. .|+ +|+ |.++|+.- ....|..... ...|+||+++|++++.
T Consensus 460 ~~~~~~KGi~g~V~l~~~-----~l~--~W~~~~L~l~~~----------~~~~~~~~~~----~~~P~fy~g~f~~~~~ 518 (595)
T 4e8d_A 460 LADTQRKGIRTGVCKDLH-----FLL--NWKHYPLPLDNP----------EKIDFSKGWT----QGQPAFYAYDFTVEEP 518 (595)
T ss_dssp TCGGGSCEEEEEEEETTE-----ECC--CEEEEEECCCCG----------GGCCTTSCCC----TTSCEEEEEEEEESSC
T ss_pred CCCCCCCCCCCCEEECCE-----ECC--CCEEEEECCCHH----------HHCCCCCCCC----CCCCEEEEEEEECCCC
T ss_conf 868888787887699999-----857--848976333113----------2223455667----8897589999975998
Q ss_pred CCCEEEEECCCCCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE
Q ss_conf 99818963787328999977542231003556988886556686787665789996113452286655677526999974
Q 003490 634 DEPLALDMEGMGKGQIWINGQSVGRYWTAYAKGDCNGCNYVGGYRPTKCQLGCGQPTQRWYHVPRSWLKPTQNFLVVFEE 713 (816)
Q Consensus 634 ~dpv~Ldl~g~gKG~vwVNG~niGRYW~~~~~g~~~~c~y~G~y~~~kc~~~cg~PqQtlYhVP~~wLk~g~N~LVifEe 713 (816)
.| |||||+|||||+|||||+||||||+ +| |||||| ||++|||+|.|+|||||+
T Consensus 519 ~D-TfLd~~gwgKG~v~VNG~nLGRYW~------------~G-------------PQ~tLY-vP~~~Lk~G~NeIvvfEl 571 (595)
T 4e8d_A 519 KD-TYLDLSEFGKGVAFVNGQNLGRFWN------------VG-------------PTLSLY-IPHSYLKEGANRIIIFET 571 (595)
T ss_dssp CB-EEEECTTCCEEEEEETTEEEEEEET------------TC-------------SBCEEE-ECGGGSCSEEEEEEEEES
T ss_pred CC-EEEECCCCCEEEEEECCEEEECCCC------------CC-------------CEEEEE-ECHHHHCCCCCEEEEEEE
T ss_conf 88-7996788864889988721352467------------79-------------768899-638995768726999995
Q ss_pred CCCCCCCEEEEEEE
Q ss_conf 69999513997320
Q 003490 714 LGGNPSRISLVKRS 727 (816)
Q Consensus 714 ~gg~p~~I~~~t~~ 727 (816)
++.....|+|.+..
T Consensus 572 ~~~~~~~i~~~~~p 585 (595)
T 4e8d_A 572 EGQYKEEIHLTRKP 585 (595)
T ss_dssp SSCCCSEEEEESSC
T ss_pred CCCCCCEEEEECCC
T ss_conf 27888547863466
No 2
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=1.00 E-value=1 Score=1125.44 Aligned_cols=566 Identities=29% Similarity=0.502 Sum_probs=452.7
Q ss_pred CCEEEEEECCEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCCHHHHHHH
Q ss_conf 40149991570999897969999986299999756999999999879988996100564478896033316100999999
Q 003490 24 IHCSVTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIK 103 (816)
Q Consensus 24 ~~~~v~~d~~~~~idG~~~~l~sG~iHy~R~~~e~W~d~l~k~K~~GlNtV~tyvfWn~hEp~~G~ydF~G~~dl~~fl~ 103 (816)
..++|+||+++|++||+|++++||++||+|+||++|+++|+|||++|+|+|++||+||.|||+||+|||+|++||++||+
T Consensus 7 r~~~v~~d~~~f~ldGkp~~i~sG~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~ 86 (654)
T 3thd_A 7 RMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLR 86 (654)
T ss_dssp CCEEEETTTTEEEETTEEECCEEEECCGGGSCGGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHH
T ss_pred CCEEEEECCCEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 71799972897999997878988864645499899999999999719988999963364089898467455377999999
Q ss_pred HHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC
Q ss_conf 99982978998218220001188988731154598475249966799999999999999770663313698559861244
Q 003490 104 TIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIEN 183 (816)
Q Consensus 104 la~e~GL~Vilr~GPYicaEw~~GG~P~WL~~~p~i~~Rt~~~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIEN 183 (816)
+|+++||+|||||||||||||++||+|.||.++|++.+|++|+.|++++++|+++|+++++ ++++++||||||+||||
T Consensus 87 ~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~--~~~~~~ggpVI~~QvEN 164 (654)
T 3thd_A 87 LAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMK--PLLYQNGGPVITVQVEN 164 (654)
T ss_dssp HHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEECSS
T ss_pred HHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEEECC
T ss_conf 9998699899556774321038886896785599845742998999999999999999852--43124799789998314
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCEEECCCCCCCCCCCCCC---CCCCC-CCCCC-------------CCC
Q ss_conf 345422124823388999999999982-9974225417878997532278---88756-77787-------------999
Q 003490 184 EYGAQSKLLGAAGHNYMTWAAKMAVEM-GTGVPWVMCKEEDAPDPVINSC---NGFYC-DAFTP-------------NQP 245 (816)
Q Consensus 184 Eyg~~~~~y~~~~~~y~~~l~~~~~~~-g~~vp~~~~~~~~~p~~vi~t~---ng~~~-~~~~~-------------~~p 245 (816)
|||+ |+.|+++||+||++++++. |+.||+++|++. .+.+.+| +|.+| .+|.+ .+|
T Consensus 165 EyG~----y~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~~---~~~~~~~g~~~g~~~t~~f~~~~~~~~~~~~~~~~~p 237 (654)
T 3thd_A 165 EYGS----YFACDFDYLRFLQKRFRHHLGDDVVLFTTDGA---HKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEP 237 (654)
T ss_dssp CGGG----SSCCCHHHHHHHHHHHHHHHCSSSEEEEEEES---SHHHHHHHCBTTBEEEEECCTTSCHHHHHHHHHHHCS
T ss_pred CCCC----CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC---CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCC
T ss_conf 4566----56561999999999998744996556960698---5344347875771310246879637899999997489
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCC--C--CCCCCCCCCCCCC
Q ss_conf 99916531156434444898776897899999999998198233444752467889779999--7--3346778998786
Q 003490 246 YKPTIWTEAWSGWFTEFGGPIHQRPVQDLAFAAARFIQKGGSFINYYMYHGGTNFGRSAGGP--F--ITTSYDYDAPIDE 321 (816)
Q Consensus 246 ~~P~~~tE~~~Gwf~~wG~~~~~r~~e~~~~~~~~~~~~g~s~~NyYM~hGGTNfG~~~G~~--~--~~TSYDYdApl~E 321 (816)
++|+||+|||+|||++||++++.|++++++..++++++.|+| +||||||||||||||+|++ + ++|||||||||+|
T Consensus 238 ~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~N~YM~hGGTNfG~~~Ga~~~~~~~~TSYDYdApi~E 316 (654)
T 3thd_A 238 KGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGAS-VNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSE 316 (654)
T ss_dssp SSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHTTCE-EEEECSBCCBCCTTCBCEETTTEECCSBCCTTCSBCT
T ss_pred CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 989599610153577579987788989999999999965984-5898634533623246788778873566767872463
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCEEECCCCCC
Q ss_conf 79888623799999999997633023579983245898631133026898502575204776424999626020169951
Q 003490 322 YGLIRQPKYGHLKELHRAIKMCERALVSADPIVTSLGGFQQAHVYSSESGDCAAFLSNYDTKSAARVLFNNMHYNLPPWS 401 (816)
Q Consensus 322 ~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~fl~n~~~~~~~~v~f~~~~~~~p~~s 401 (816)
+|++ +|||.++|+++ +.+.+......|.. .+...|. +|.+. .
T Consensus 317 ~G~~-t~Ky~~lr~li---~~~~~~~~~~~P~~------~p~~~~~-------------------~v~l~---~------ 358 (654)
T 3thd_A 317 AGDL-TEKYFALRNII---QKFEKVPEGPIPPS------TPKFAYG-------------------KVTLE---K------ 358 (654)
T ss_dssp TCCB-CHHHHHHHHHH---TTTSCCCCSCCCCC------CCBCCCE-------------------EEECE---E------
T ss_pred CCCC-CHHHHHHHHHH---HHHCCCCCCCCCCC------CCCCCCC-------------------CEEEC---C------
T ss_conf 5673-37899999999---97147998889998------7645667-------------------57522---2------
Q ss_pred EEECCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEE
Q ss_conf 121389861121021101102211123221122344433-----334324789986555530010058799854799999
Q 003490 402 ISVLPDCRNVVFNTAKVGVQTSQMEMLPANAEMFSWESY-----FEDISSLDDSSTFTTQGLLEQINVTRDASDYLWYIT 476 (816)
Q Consensus 402 vsil~dc~~v~f~ta~v~~q~~~~~~~~~~~~~~~w~~~-----~e~~~~~~~~~~~~~~~~~Eql~~t~d~sgYlwY~T 476 (816)
....|+.+ .+|+.+ ..|+ .||+++| .+||++|||
T Consensus 359 -------------------------------~~~L~~~l~~l~~~~~~~s---~~P~----tmE~l~Q---~~GyvlY~t 397 (654)
T 3thd_A 359 -------------------------------LKTVGAALDILCPSGPIKS---LYPL----TFIQVKQ---HYGFVLYRT 397 (654)
T ss_dssp -------------------------------EEETTTTHHHHCTTCCEEE---SSCC----BTGGGTC---CSSEEEEEE
T ss_pred -------------------------------CCCHHHHHHHHCCCCCCCC---CCCC----CHHHHCC---CCCEEEEEE
T ss_conf -------------------------------2348997776276777536---9988----9899288---757699983
Q ss_pred EECCCCCCCCCCCCCCCEEE--ECCCCEEEEEEECCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCC
Q ss_conf 95189996444689875488--3894439999999999999975334420389856530699757999985379645556
Q 003490 477 SVDIGSSESFLHGGELPTLI--VQSTGHALHIFINGQLSGSAFGTREARRFMYTGKVNLRAGRNKIALLSVAVGLPNVGG 554 (816)
Q Consensus 477 ~v~~~~~~~~~~~g~~~~L~--v~~~~d~~~vfVNg~~iG~~~g~~~~~~~~~~~~i~l~~G~n~L~iLve~~Gr~N~G~ 554 (816)
++.....+ ...|. +.+++|+++|||||+++|++++.. .. ++++..+.+ ++|+||||||||+|||+
T Consensus 398 ~i~~~~~~-------~~~l~l~~~~v~Dra~Vfvdg~~~G~l~r~~---~~--~l~~~~~~~-~~L~ILVEN~GRvNyG~ 464 (654)
T 3thd_A 398 TLPQDCSN-------PAPLSSPLNGVHDRAYVAVDGIPQGVLERNN---VI--TLNITGKAG-ATLDLLVENMGRVNYGA 464 (654)
T ss_dssp ECSSCEEE-------EEEEECTTCCEESEEEEEETTEEEEEEETTT---BC--EEEEEECTT-CEEEEEEECCCCBCSSG
T ss_pred ECCCCCCC-------CCCEEECCCCCCEEEEEEECCEEEEEEECCC---CE--EEECCCCCC-CEEEEEEECCCCCCCCC
T ss_conf 25777788-------8403430478632799988997999996156---52--675058889-88999997488654688
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCCCCCCCE-EECCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 8784454310247970346885247548927-96158521133558-----89888753232332222588834999998
Q 003490 555 HYETWNTGILGPVALHGLDQGKWDLSWQKWT-YQVGLRGEAMNLVS-----PNGISSVEWMQASLAVQRQQPLMWHKAYF 628 (816)
Q Consensus 555 ~~e~~~kGI~G~V~l~g~~~g~~dLs~~~W~-y~vgL~gE~~~~~~-----~~~~~~~~W~~~~~~~~~~~~~twYkt~F 628 (816)
.+ +++|||+|+|+|++. .|+ +|+ |.++|+........ ..+.....|.... .. ..+|+||+++|
T Consensus 465 ~i-~d~KGi~g~V~l~~~-----~l~--~W~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~P~fy~g~f 533 (654)
T 3thd_A 465 YI-NDFKGLVSNLTLSSN-----ILT--DWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNS--SN-YTLPAFYMGNF 533 (654)
T ss_dssp GG-CCCCEECSCCEETTE-----ECC--CEEEEECCHHHHHHTTTTTTCCC----------------C-CCCCEEEEEEE
T ss_pred CC-CCCCCCCCCEEECCE-----ECC--CCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCC--CC-CCCCEEEEEEE
T ss_conf 77-878988776578999-----827--848986526125544320122333322233445666--67-88877999999
Q ss_pred ECCCCC----CCEEEEECCCCCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 689999----9818963787328999977542231003556988886556686787665789996113452286655677
Q 003490 629 NAPEGD----EPLALDMEGMGKGQIWINGQSVGRYWTAYAKGDCNGCNYVGGYRPTKCQLGCGQPTQRWYHVPRSWLKPT 704 (816)
Q Consensus 629 ~~p~g~----dpv~Ldl~g~gKG~vwVNG~niGRYW~~~~~g~~~~c~y~G~y~~~kc~~~cg~PqQtlYhVP~~wLk~g 704 (816)
+++.+. .+|||||+|||||+|||||+||||||++ +| |||||| ||++|||+|
T Consensus 534 ~i~~~~~~~p~DTFLd~~gWgKGvV~VNG~NLGRYW~~-----------~G-------------PQ~TLY-vP~p~Lk~G 588 (654)
T 3thd_A 534 SIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPA-----------RG-------------PQLTLF-VPQHILMTS 588 (654)
T ss_dssp CCCSSCTTCSCBEEEECTTCCSEEEEETTEEEEEECTT-----------TC-------------SCCCEE-ECGGGCCSS
T ss_pred ECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCC-----------CC-------------CEEEEE-ECHHHHCCC
T ss_conf 72677788887779967888707999898025425477-----------79-------------768889-648995889
Q ss_pred -CCEEEEEEECCCCC-------CCEEEEEEE
Q ss_conf -52699997469999-------513997320
Q 003490 705 -QNFLVVFEELGGNP-------SRISLVKRS 727 (816)
Q Consensus 705 -~N~LVifEe~gg~p-------~~I~~~t~~ 727 (816)
.|+|||||+++... ..|.|.+..
T Consensus 589 ~~NeIiVfEle~~~~~~~~~~~~~i~~~~~P 619 (654)
T 3thd_A 589 APNTITVLELEWAPCSSDDPELCAVTFVDRP 619 (654)
T ss_dssp SCEEEEEEESSCCSCSSSCGGGSEEEEESSC
T ss_pred CCCEEEEEEEECCCCCCCCCCCCEEEEECCC
T ss_conf 9846999995168765555665259963556
No 3
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=1.00 E-value=1 Score=1091.95 Aligned_cols=661 Identities=28% Similarity=0.455 Sum_probs=534.5
Q ss_pred CEEEEEECCEEEECCEEEEEEEEEEECCCCC-HHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCCHHHHHHH
Q ss_conf 0149991570999897969999986299999-756999999999879988996100564478896033316100999999
Q 003490 25 HCSVTYDRKALLINGQRRILFSGSIHYPRST-PDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIK 103 (816)
Q Consensus 25 ~~~v~~d~~~~~idG~~~~l~sG~iHy~R~~-~e~W~d~l~k~K~~GlNtV~tyvfWn~hEp~~G~ydF~G~~dl~~fl~ 103 (816)
...|+||+++|+|||+|++++||++||+|+| |++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||+
T Consensus 3 ~~~v~~d~~~~~idG~p~~l~sG~~hy~r~p~~~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~ 82 (971)
T 1tg7_A 3 QKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFD 82 (971)
T ss_dssp CSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHH
T ss_pred CCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCEECCCCHHHHHHHHH
T ss_conf 53699848879999949999998888210894678999999999709999999646777089888322456678999999
Q ss_pred HHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC
Q ss_conf 99982978998218220001188988731154598475249966799999999999999770663313698559861244
Q 003490 104 TIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIEN 183 (816)
Q Consensus 104 la~e~GL~Vilr~GPYicaEw~~GG~P~WL~~~p~i~~Rt~~~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIEN 183 (816)
+|+|+||+|||||||||||||++||+|.||.++|+ ++|++|+.|++++++|+++|++++++ +++.+||||||+||||
T Consensus 83 ~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~~~p~-~lR~~~p~y~~~~~~~~~~l~~~~~~--~~~~~ggpVI~~QveN 159 (971)
T 1tg7_A 83 AAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDG-ILRTSDEAYLKATDNYASNIAATIAK--AQITNGGPIILYQPEN 159 (971)
T ss_dssp HHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSS-CTTSSCHHHHHHHHHHHHHHHHHHHH--TBGGGTSSEEEECCSS
T ss_pred HHHHCCCEEEEECCCCCCCEECCCCCCEEECCCCC-EECCCCHHHHHHHHHHHHHHHHHHHH--HHHCCCCCEEEEECCC
T ss_conf 99985998997058742114447873156035688-75479989999999999999999864--3201799777873266
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCC----CCCCCCCCCC---------CCCCCC-C-------C-
Q ss_conf 345422-124823388999999999982997422541787----8997532278---------887567-7-------7-
Q 003490 184 EYGAQS-KLLGAAGHNYMTWAAKMAVEMGTGVPWVMCKEE----DAPDPVINSC---------NGFYCD-A-------F- 240 (816)
Q Consensus 184 Eyg~~~-~~y~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~----~~p~~vi~t~---------ng~~~~-~-------~- 240 (816)
|||+.+ +.++..+++||+|++++++++|++||++||++. ..+..+...+ .|++|. . |
T Consensus 160 Eyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~~ 239 (971)
T 1tg7_A 160 EYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLP 239 (971)
T ss_dssp CCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56766666531669999999999999709983399954754455465433573248753777665656775542000001
Q ss_pred -------CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH-----HHHHHCCEEEEEEEEECCCCCCCCCCCCC
Q ss_conf -------879999991653115643444489877689789999999-----99981982334447524678897799997
Q 003490 241 -------TPNQPYKPTIWTEAWSGWFTEFGGPIHQRPVQDLAFAAA-----RFIQKGGSFINYYMYHGGTNFGRSAGGPF 308 (816)
Q Consensus 241 -------~~~~p~~P~~~tE~~~Gwf~~wG~~~~~r~~e~~~~~~~-----~~~~~g~s~~NyYM~hGGTNfG~~~G~~~ 308 (816)
...+|++|.|++|+|+|||++||+.+++|++++.+..++ .+++.|++.+||||||||||||+++ ++.
T Consensus 240 ~~~~d~~r~~~p~~P~~~~E~~~Gw~~~Wg~~~~~~~~~~~~~~~~~~~~~~~la~Ga~~vnyYm~~GGTNfG~~~-g~~ 318 (971)
T 1tg7_A 240 TYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLG-HPG 318 (971)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCB-CTT
T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC-CCC
T ss_conf 5699986423899997998137857567788765666355768999999999997799789999710435776567-877
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--------------CCCCCC--CCCEEEE------
Q ss_conf 334677899878679888623799999999997633023579983--------------245898--6311330------
Q 003490 309 ITTSYDYDAPIDEYGLIRQPKYGHLKELHRAIKMCERALVSADPI--------------VTSLGG--FQQAHVY------ 366 (816)
Q Consensus 309 ~~TSYDYdApl~E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~--------------~~~~~~--~~~~~~y------ 366 (816)
++|||||||||+|+|++++|||.++|+|+++++.+++ ++.+++. ...+.+ ..++..|
T Consensus 319 ~~tSYDy~Apl~E~G~~t~~ky~elr~l~~~l~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~~~ 397 (971)
T 1tg7_A 319 GYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPG-YLVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSD 397 (971)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCHH-HHTSEECCCBSSSSBSCTTEEEEEEECSSTTSCEEEEEEESS
T ss_pred CCEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHCHH-HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCC
T ss_conf 3005234756076788364689999999999986757-651587667654446787438999434789851899996567
Q ss_pred ----------------------------------------------------------C--C-C----------------
Q ss_conf ----------------------------------------------------------2--6-8----------------
Q 003490 367 ----------------------------------------------------------S--S-E---------------- 369 (816)
Q Consensus 367 ----------------------------------------------------------~--~-~---------------- 369 (816)
. . .
T Consensus 398 ~~~~~~~~~~l~v~ts~g~~~iP~~~g~i~l~gr~ski~~~d~~~g~~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~~e 477 (971)
T 1tg7_A 398 YSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHE 477 (971)
T ss_dssp TTCCCCEEECEEEEETTEEEEECSSSSCEEECTTCCEEEEEEEEETTEEEEEESSEEEEEEEETTEEEEEEEECTTCEEE
T ss_pred CCCCCCEEEEEEEECCCCCEECCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCCCCCEE
T ss_conf 87777448999975589877616778736788973089953432487689986200479888789049999848997337
Q ss_pred -----------CCCE-E---------EEEEECCCCCCEE-EEECCE-----------EECCCC-----------------
Q ss_conf -----------9850-2---------5752047764249-996260-----------201699-----------------
Q 003490 370 -----------SGDC-A---------AFLSNYDTKSAAR-VLFNNM-----------HYNLPP----------------- 399 (816)
Q Consensus 370 -----------~~~~-~---------~fl~n~~~~~~~~-v~f~~~-----------~~~~p~----------------- 399 (816)
.+.| + +|+.|.+.....+ |+|.+. .|-+|+
T Consensus 478 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~~~ 557 (971)
T 1tg7_A 478 FAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPGYSNQETTA 557 (971)
T ss_dssp EEEETCCCCEEEESCCTTCEEEEETTEEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCCCCSSSSCCCCCSHHHHH
T ss_pred EEEECCCCEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCEEEEEECHHHHHEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99953762035057665305843685499950468854899979989999645764108655446766667656655678
Q ss_pred -----------CCEEE-------------------C--C-CCCCEEEECCEECCCCCCCC----CCC----CC----CCC
Q ss_conf -----------51121-------------------3--8-98611210211011022111----232----21----122
Q 003490 400 -----------WSISV-------------------L--P-DCRNVVFNTAKVGVQTSQME----MLP----AN----AEM 434 (816)
Q Consensus 400 -----------~svsi-------------------l--~-dc~~v~f~ta~v~~q~~~~~----~~~----~~----~~~ 434 (816)
||+|| + | +|++|+||+++|.+|++... +.+ .. ...
T Consensus 558 ~~v~v~g~ylvrsasi~~~~l~l~gd~~~~t~~ev~~~p~~~~~v~~Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l~~ 637 (971)
T 1tg7_A 558 SSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVVGAPSGAKNLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKS 637 (971)
T ss_dssp TCCEEECSSEEEEEEEETTEEEEEEEBSSCEEEEEESCCTTCCEEEETTEEECCEECTTCCEEEEECCCCCCCCCCCGGG
T ss_pred CEEEEECCCEEEEEEEECCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 51898667078999980988999852488822799856888668999998840577468618875477765424656677
Q ss_pred CCCCCCCC---CCCCCCCCCCCCCCCCHHHCCC----C----CCCCCE------EEEEEEECCCCCCCCCCCCCCCEEEE
Q ss_conf 34443333---4324789986555530010058----7----998547------99999951899964446898754883
Q 003490 435 FSWESYFE---DISSLDDSSTFTTQGLLEQINV----T----RDASDY------LWYITSVDIGSSESFLHGGELPTLIV 497 (816)
Q Consensus 435 ~~w~~~~e---~~~~~~~~~~~~~~~~~Eql~~----t----~d~sgY------lwY~T~v~~~~~~~~~~~g~~~~L~v 497 (816)
+.|+...+ ..+.++ +...+...+.|+.++ | .+.+|| +|||++|++..++ ..|.+
T Consensus 638 l~Wk~~~~~pe~~~~~d-Ds~W~~~~l~~~~n~~~p~t~p~~~~~sdYGf~~G~lwYR~~F~~~~~~--------~~L~~ 708 (971)
T 1tg7_A 638 LKWKSVDTLPEAKNTYD-DSAWTSADHAYTNNSAHSLQTPTSLFASDYGYHTGALLFRGHFTANGKE--------KTFFV 708 (971)
T ss_dssp SCCEEEESCGGGSTTCC-CTTSEECCCSSCCCTTCCCSSSSCCBGGGGTCCSSCEEEEEEEECCSCC--------CEEEE
T ss_pred CCEEEECCCCCCCCCCC-CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC--------EEEEE
T ss_conf 88289577843468888-7776589870213434778877667777668667429999899878860--------38999
Q ss_pred C---CCCEEEEEEECCEEEEEEECCCC--CCEEEEEEEEECCC-CCCEEEEEEECCCCCCC---CCCCCCCCCCCCCCEE
Q ss_conf 8---94439999999999999975334--42038985653069-97579999853796455---5687844543102479
Q 003490 498 Q---STGHALHIFINGQLSGSAFGTRE--ARRFMYTGKVNLRA-GRNKIALLSVAVGLPNV---GGHYETWNTGILGPVA 568 (816)
Q Consensus 498 ~---~~~d~~~vfVNg~~iG~~~g~~~--~~~~~~~~~i~l~~-G~n~L~iLve~~Gr~N~---G~~~e~~~kGI~G~V~ 568 (816)
+ +++|.++|||||+++|+..+... ..++.+.. ..|+. |.|+|+|||+|+|++|+ |++++++++||. +|+
T Consensus 709 ~~~gG~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~gg~NvI~Vlvdn~G~~nsWy~G~~~~~~~~GI~-~v~ 786 (971)
T 1tg7_A 709 QTKGGTAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQSGKNYVITVVIDNMGLDEDWTIGSEDMKNPRGII-QYS 786 (971)
T ss_dssp EEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEE-EEE
T ss_pred EECCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEEE-EEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCE-EEE
T ss_conf 7157654239999999997655467875567668998-67447995189999936777766566733012687624-889
Q ss_pred EECCCCCC--CCCCCCCC--EE---------ECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEEEE--CCC
Q ss_conf 70346885--24754892--79---------615852113355889888753232332222-5888349999986--899
Q 003490 569 LHGLDQGK--WDLSWQKW--TY---------QVGLRGEAMNLVSPNGISSVEWMQASLAVQ-RQQPLMWHKAYFN--APE 632 (816)
Q Consensus 569 l~g~~~g~--~dLs~~~W--~y---------~vgL~gE~~~~~~~~~~~~~~W~~~~~~~~-~~~~~twYkt~F~--~p~ 632 (816)
|.+.+.+. .+|+.+.| +| ++||.||++++|+| +.+...|++.+..+. ...+++|||++|+ +|+
T Consensus 787 L~g~~~~~~~w~l~g~~~ge~~~D~~RgplN~~GL~gE~~~w~~p-~~~~~~W~~~sp~~gl~~~Gv~wyr~~f~L~~p~ 865 (971)
T 1tg7_A 787 LSGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQP-QPPTQKWDSSSPFTGLTKPGIRFYSTSFDLDLPS 865 (971)
T ss_dssp ETTSCGGGCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHTTTTSS-SCCCTTSBCCCTTTCBSSSEEEEEEEEEECCCCT
T ss_pred EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
T ss_conf 964579874499850556655554334544544443422253279-9983466487876788888508999997456877
Q ss_pred CCC-CEEEEECCCC------CEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-CCC
Q ss_conf 999-8189637873------28999977542231003556988886556686787665789996113452286655-677
Q 003490 633 GDE-PLALDMEGMG------KGQIWINGQSVGRYWTAYAKGDCNGCNYVGGYRPTKCQLGCGQPTQRWYHVPRSWL-KPT 704 (816)
Q Consensus 633 g~d-pv~Ldl~g~g------KG~vwVNG~niGRYW~~~~~g~~~~c~y~G~y~~~kc~~~cg~PqQtlYhVP~~wL-k~g 704 (816)
+.| |+.|+|..|+ ||++||||++|||||+.+ | || |+||||++|| |+|
T Consensus 866 g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~-----------~-------------pq-r~y~VP~giLn~~G 920 (971)
T 1tg7_A 866 GYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNI-----------G-------------PQ-TSFPVPEGILNYHG 920 (971)
T ss_dssp TEECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTT-----------C-------------SC-CEEEECBTTBCTTS
T ss_pred CCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCC-----------C-------------CC-EEEECCHHHHCCCC
T ss_conf 89830899857888777563289999999874012788-----------7-------------87-79977979938699
Q ss_pred CCEEEE----EEECCCCCCCEEEEEEE
Q ss_conf 526999----97469999513997320
Q 003490 705 QNFLVV----FEELGGNPSRISLVKRS 727 (816)
Q Consensus 705 ~N~LVi----fEe~gg~p~~I~~~t~~ 727 (816)
.|+|+| ||+.||+|..|+|+++.
T Consensus 921 ~N~i~vrv~~~~~~Gg~~~~i~l~~~~ 947 (971)
T 1tg7_A 921 TNWLALSLWAQEDNGAKLDSFELINTT 947 (971)
T ss_dssp EEEEEEEEEECSTTCBCCSCEEEEECC
T ss_pred CCEEEEEEECCCCCCCCCCCEEEEECC
T ss_conf 638999986277778986506999750
No 4
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=1.00 E-value=1 Score=1081.76 Aligned_cols=563 Identities=29% Similarity=0.560 Sum_probs=472.4
Q ss_pred CEEEEEECCEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCCHHHHHHHH
Q ss_conf 01499915709998979699999862999997569999999998799889961005644788960333161009999999
Q 003490 25 HCSVTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKT 104 (816)
Q Consensus 25 ~~~v~~d~~~~~idG~~~~l~sG~iHy~R~~~e~W~d~l~k~K~~GlNtV~tyvfWn~hEp~~G~ydF~G~~dl~~fl~l 104 (816)
...|++|++.|++||||++++||++||+|+++++|+++|++||++|+|+|++||||+.|||+||+|||++..++++||++
T Consensus 5 ~r~v~~~~~~f~lnGkp~~i~gg~~Hy~r~~~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~l 84 (612)
T 3d3a_A 5 EGTFEVGKNTFLLNGEPFVVKAAEIHYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRL 84 (612)
T ss_dssp CCCEEECSSSEEETTEEECCEEEEECGGGSCGGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHH
T ss_pred CCEEEEECCEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 66699839999999989999888826766998999999999997399899972707732898983480689899999999
Q ss_pred HHHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
Q ss_conf 99829789982182200011889887311545984752499667999999999999997706633136985598612443
Q 003490 105 IQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENE 184 (816)
Q Consensus 105 a~e~GL~Vilr~GPYicaEw~~GG~P~WL~~~p~i~~Rt~~~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENE 184 (816)
|+++||+||||+||||||||++||+|.||.+++++.+|++++.|++++++|+++|+++++ +++++|+|||||||||||
T Consensus 85 a~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~--~~~~~n~p~II~wqIeNE 162 (612)
T 3d3a_A 85 AQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKKDIKLREQDPYYMERVKLFLNEVGKQLA--DLQISKGGNIIMVQVENE 162 (612)
T ss_dssp HHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEECSSC
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCEEEEEECCC
T ss_conf 997799999956854466011489735422478833437998999999999999999874--110006997778740344
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCEEECCCC-----CCCCCCCCCCCCCCC-----CCCC---CCCCCCCCE
Q ss_conf 4542212482338899999999998299-7422541787-----899753227888756-----7778---799999916
Q 003490 185 YGAQSKLLGAAGHNYMTWAAKMAVEMGT-GVPWVMCKEE-----DAPDPVINSCNGFYC-----DAFT---PNQPYKPTI 250 (816)
Q Consensus 185 yg~~~~~y~~~~~~y~~~l~~~~~~~g~-~vp~~~~~~~-----~~p~~vi~t~ng~~~-----~~~~---~~~p~~P~~ 250 (816)
||++ + .+++|++++++++++.|+ +||+++|+.. ...+.+++++| |.| +.+. +.+|++|.|
T Consensus 163 yg~y----g-~~~~y~~~l~~~l~~~g~~~vp~~~~~~~~~~~~~~~~~~~~t~n-f~s~~~~~~~~~~~~~~~p~~P~~ 236 (612)
T 3d3a_A 163 YGAF----G-IDKPYISEIRDMVKQAGFTGVPLFQCDWNSNFENNALDDLLWTIN-FGTGANIDEQFKRLKELRPDTPLM 236 (612)
T ss_dssp GGGT----C-CCHHHHHHHHHHHHHHTCCSSCEEEEECTTTGGGTCCTTSEEEEE-EETTCCHHHHHHHHHHHCTTSCCE
T ss_pred CCCC----C-CHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCE
T ss_conf 5655----7-659999999999987189960330004563222577787666455-677721789999998745589962
Q ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCC--C-C--CCCCCCCCCCCCCCCCC
Q ss_conf 53115643444489877689789999999999819823344475246788977999--9-7--33467789987867988
Q 003490 251 WTEAWSGWFTEFGGPIHQRPVQDLAFAAARFIQKGGSFINYYMYHGGTNFGRSAGG--P-F--ITTSYDYDAPIDEYGLI 325 (816)
Q Consensus 251 ~tE~~~Gwf~~wG~~~~~r~~e~~~~~~~~~~~~g~s~~NyYM~hGGTNfG~~~G~--~-~--~~TSYDYdApl~E~G~~ 325 (816)
++|||+|||++||++++.|++++++.++++++++|+| +||||||||||||+|+|+ + | ++|||||||||+|+|++
T Consensus 237 ~~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~ga~~~~~~~~~tSYDy~Apl~E~g~~ 315 (612)
T 3d3a_A 237 CSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNIS-FSLYMTHGGTSFGHWGGANFPNFSPTCTSYDYDAPINESGKV 315 (612)
T ss_dssp EEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTTTCE-EEEECSBCCBCCTTCBCEETTTTEEBCSBCCTTCSBCTTSCC
T ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 0023467650124777667999999999999986996-686353013477856666887766414531368724757873
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEECCEEECCCCCCEEEC
Q ss_conf 86237999999999976330235799832458986311330268985025752047764249996260201699511213
Q 003490 326 RQPKYGHLKELHRAIKMCERALVSADPIVTSLGGFQQAHVYSSESGDCAAFLSNYDTKSAARVLFNNMHYNLPPWSISVL 405 (816)
Q Consensus 326 ~~pKy~~lr~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~fl~n~~~~~~~~v~f~~~~~~~p~~svsil 405 (816)
+|||.++|+++.. .+..+.+.. + +..+.. .+.+|++++
T Consensus 316 -~~ky~~lr~~~~~------~~~~~~~~~-~-------------------~p~~~~------------~~~~~~~~~--- 353 (612)
T 3d3a_A 316 -TPKYLEVRNLLGN------YLPEGETLP-E-------------------IPDSIP------------TIAIPTIKM--- 353 (612)
T ss_dssp -CHHHHHHHHHHTT------SSCTTCCCC-C-------------------CCCCCC------------BCCEEEEEC---
T ss_pred -CHHHHHHHHHHHH------HCCCCCCCC-C-------------------CCCCCC------------CCCCCCEEE---
T ss_conf -2789999999998------534677767-7-------------------888876------------454565877---
Q ss_pred CCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf 89861121021101102211123221122344433334324789986555530010058799854799999951899964
Q 003490 406 PDCRNVVFNTAKVGVQTSQMEMLPANAEMFSWESYFEDISSLDDSSTFTTQGLLEQINVTRDASDYLWYITSVDIGSSES 485 (816)
Q Consensus 406 ~dc~~v~f~ta~v~~q~~~~~~~~~~~~~~~w~~~~e~~~~~~~~~~~~~~~~~Eql~~t~d~sgYlwY~T~v~~~~~~~ 485 (816)
++++ ..|+.+.+++.+ .. +.+|||++| .+||+||+|+++...
T Consensus 354 -------~~~~------------------~l~~~~~~~~~~---~~----p~~~E~l~q---~~gy~lY~t~i~~~~--- 395 (612)
T 3d3a_A 354 -------TEMA------------------VLFDNLPHPKES---ED----IRTMEAFDQ---GWGSILYRTSLSASD--- 395 (612)
T ss_dssp -------CEEE------------------EGGGGCCCCEEE---SS----CCBGGGGTC---CSSEEEEEEEECCBS---
T ss_pred -------EEEE------------------EHHHHCCCCCCC---CC----CCCHHHHCC---CCCEEEEEEEECCCC---
T ss_conf -------4261------------------588847886347---89----889999598---777599998854788---
Q ss_pred CCCCCCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 44689875488389443999999999999997533442038985653069975799998537964555687844543102
Q 003490 486 FLHGGELPTLIVQSTGHALHIFINGQLSGSAFGTREARRFMYTGKVNLRAGRNKIALLSVAVGLPNVGGHYETWNTGILG 565 (816)
Q Consensus 486 ~~~~g~~~~L~v~~~~d~~~vfVNg~~iG~~~g~~~~~~~~~~~~i~l~~G~n~L~iLve~~Gr~N~G~~~e~~~kGI~G 565 (816)
..++|++.+++|++||||||+++|++++......+ . +.+..|.|+|+||||||||+|||++| +++|||+|
T Consensus 396 -----~~~~L~i~~~~D~a~Vfvng~~~G~~~~~~~~~~~--~--~~~~~~~~~L~iLven~Gr~NyG~~~-~~~kGi~g 465 (612)
T 3d3a_A 396 -----KEQTLLITEAHDWAQVFLNGKKLATLSRLKGEGVV--K--LPPLKEGDRLDILVEAMGRMNFGKGI-YDWKGITE 465 (612)
T ss_dssp -----SCEEEEEEEEESEEEEEETTEEEEEEETTTTCCEE--E--ECCBCTTEEEEEEEECCCCCCSGGGG-CCCCEEEE
T ss_pred -----CCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEE--E--EECCCCCCEEEEEEEECCCCCCCCCC-CCCCCCCC
T ss_conf -----87549854787089999999999999811477269--8--65378985899999956987668545-57987776
Q ss_pred CEEEECCCCCCCCCCCCCCE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCC
Q ss_conf 47970346885247548927-96158521133558898887532323322225888349999986899999818963787
Q 003490 566 PVALHGLDQGKWDLSWQKWT-YQVGLRGEAMNLVSPNGISSVEWMQASLAVQRQQPLMWHKAYFNAPEGDEPLALDMEGM 644 (816)
Q Consensus 566 ~V~l~g~~~g~~dLs~~~W~-y~vgL~gE~~~~~~~~~~~~~~W~~~~~~~~~~~~~twYkt~F~~p~g~dpv~Ldl~g~ 644 (816)
+|+|++ ++++.+|+ +|+ |+++|++|.. .++.|..... . .++|+|||++|++|++.| |||||+||
T Consensus 466 ~V~l~~-~~~~~~l~--~W~~y~l~l~~~~~--------~~~~~~~~~~--~-~~~p~~yk~~f~~~~~~D-t~Ld~~g~ 530 (612)
T 3d3a_A 466 KVELQS-DKGVELVK--DWQVYTIPVDYSFA--------RDKQYKQQEN--A-ENQPAYYRSTFNLNELGD-TFLNMMNW 530 (612)
T ss_dssp EEEEEE-TTEEEECC--CEEEEEECCCHHHH--------HSSCCBC--------CCCEEEEEEEEESSCCB-EEEECTTC
T ss_pred CEEECC-CCCCEECC--CCEEEEECCCCCCC--------CCCCCCCCCC--C-CCCCEEEEEEEECCCCCC-EEEECCCC
T ss_conf 269858-86743436--86699834676422--------2355345677--7-889889999998899873-89965778
Q ss_pred CCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEE
Q ss_conf 32899997754223100355698888655668678766578999611345228665567752699997469999513997
Q 003490 645 GKGQIWINGQSVGRYWTAYAKGDCNGCNYVGGYRPTKCQLGCGQPTQRWYHVPRSWLKPTQNFLVVFEELGGNPSRISLV 724 (816)
Q Consensus 645 gKG~vwVNG~niGRYW~~~~~g~~~~c~y~G~y~~~kc~~~cg~PqQtlYhVP~~wLk~g~N~LVifEe~gg~p~~I~~~ 724 (816)
|||+|||||+||||||+ +| |||||| ||++|||+|.|+||||||+|..+..|+|.
T Consensus 531 gKG~vwVNG~nlGRYW~------------~G-------------PqqtlY-vP~~~Lk~g~N~ivvfE~~~~~~~~i~~~ 584 (612)
T 3d3a_A 531 SKGMVWVNGHAIGRYWE------------IG-------------PQQTLY-VPGCWLKKGENEIIILDMAGPSKAETEGL 584 (612)
T ss_dssp CEEEEEETTEEEEEEET------------TC-------------SCCEEE-ECGGGCCSEEEEEEEEESSCCSSSEEEEE
T ss_pred CCEEEEECCEEEEEEEE------------CC-------------CEEEEE-ECHHHCCCCCCEEEEEEECCCCCCEEEEE
T ss_conf 73799998875890895------------29-------------889988-15899178974899999768988548854
Q ss_pred EEE
Q ss_conf 320
Q 003490 725 KRS 727 (816)
Q Consensus 725 t~~ 727 (816)
+..
T Consensus 585 ~~p 587 (612)
T 3d3a_A 585 RQP 587 (612)
T ss_dssp SSC
T ss_pred CCC
T ss_conf 665
No 5
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=1.00 E-value=1 Score=958.93 Aligned_cols=658 Identities=25% Similarity=0.384 Sum_probs=478.1
Q ss_pred CCEEEEEECCEEEECCEEEEEEEEEEECCCCC-HHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCCHHHHHH
Q ss_conf 40149991570999897969999986299999-75699999999987998899610056447889603331610099999
Q 003490 24 IHCSVTYDRKALLINGQRRILFSGSIHYPRST-PDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFI 102 (816)
Q Consensus 24 ~~~~v~~d~~~~~idG~~~~l~sG~iHy~R~~-~e~W~d~l~k~K~~GlNtV~tyvfWn~hEp~~G~ydF~G~~dl~~fl 102 (816)
.+..|+||+++|++||||++++||+|||+|+| |++|+|+|+|||++|+|+|++|||||.|||+||+|||+|++||++||
T Consensus 22 ~~~~v~~d~~~~~idG~p~~i~sGeiHy~R~p~pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl 101 (1003)
T 3og2_A 22 LQNIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFF 101 (1003)
T ss_dssp SSSSEEECSSCEEETTEEECEEEEEECGGGCCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHH
T ss_pred CCCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHH
T ss_conf 76169981886999997989999988875599889999999999973998899851644348978873555555599999
Q ss_pred HHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
Q ss_conf 99998297899821822000118898873115459847524996679999999999999977066331369855986124
Q 003490 103 KTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIE 182 (816)
Q Consensus 103 ~la~e~GL~Vilr~GPYicaEw~~GG~P~WL~~~p~i~~Rt~~~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIE 182 (816)
++|+|+||+|||||||||||||++||+|.||.+.|+ ++|++|+.|++++++|+++|+++++ ++++++||||||+|||
T Consensus 102 ~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~~~~-~lRt~~p~yl~~~~~~~~~l~~~~~--~~~~~~GGpII~~QVE 178 (1003)
T 3og2_A 102 EAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG-KLRTDAPDYLHATDNYVAHIASIIA--KAQITNGGPVILYQPE 178 (1003)
T ss_dssp HHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGGCCS-CTTSCCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEEEES
T ss_pred HHHHHCCCEEEECCCCCEEEECCCCCCCCHHCCCCC-EECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEECC
T ss_conf 999985998993278633335278876621025997-0057998999999999999999987--7642379978999724
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCC----CCCCCCCCC---------CCCCCCCCC---------
Q ss_conf 4345422124823388999999999982997422541787----899753227---------888756777---------
Q 003490 183 NEYGAQSKLLGAAGHNYMTWAAKMAVEMGTGVPWVMCKEE----DAPDPVINS---------CNGFYCDAF--------- 240 (816)
Q Consensus 183 NEyg~~~~~y~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~----~~p~~vi~t---------~ng~~~~~~--------- 240 (816)
||||++.+.++.++++||+||++|++++|++|||+||++. .+|+.++.+ +++++|+++
T Consensus 179 NEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w~~~~~~ 258 (1003)
T 3og2_A 179 NEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLP 258 (1003)
T ss_dssp SCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCCBSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCCCTTCSC
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 54575334456777899999999999749936799768852246577765551333024566674303687655555415
Q ss_pred -------CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH-----HHHHCCEEEEEEEEECCCCCCCCCCCCC
Q ss_conf -------8799999916531156434444898776897899999999-----9981982334447524678897799997
Q 003490 241 -------TPNQPYKPTIWTEAWSGWFTEFGGPIHQRPVQDLAFAAAR-----FIQKGGSFINYYMYHGGTNFGRSAGGPF 308 (816)
Q Consensus 241 -------~~~~p~~P~~~tE~~~Gwf~~wG~~~~~r~~e~~~~~~~~-----~~~~g~s~~NyYM~hGGTNfG~~~G~~~ 308 (816)
.+.+|++|+||+|||+|||++||+++++|++++++..+++ +++.|+|++||||||||||||+|+ ++.
T Consensus 259 ~~~~~~~~~~~p~~P~~~~Ef~~GWfd~WG~~~~~~~~~~~~~~~~~~~~~~~l~~G~s~vN~YM~hGGTNFG~~~-~~~ 337 (1003)
T 3og2_A 259 TTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLG-HPG 337 (1003)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHSSHHHHHHHHHHHHHTTCSEEEEEEEECCBCCTTCB-CTT
T ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC-CCC
T ss_conf 7799876512899982887001433343588877777334059999999999885688557888721646865357-998
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---CCCCCCEEEEC--CCCCCEEEEEEECCCC
Q ss_conf 334677899878679888623799999999997633023579983245---89863113302--6898502575204776
Q 003490 309 ITTSYDYDAPIDEYGLIRQPKYGHLKELHRAIKMCERALVSADPIVTS---LGGFQQAHVYS--SESGDCAAFLSNYDTK 383 (816)
Q Consensus 309 ~~TSYDYdApl~E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~~~~---~~~~~~~~~y~--~~~~~~~~fl~n~~~~ 383 (816)
++|||||||||+|+|++++|||.++|.+|.|++.+. +++.++|...+ ...+....++. ..+++.|.|+.+.+..
T Consensus 338 ~~TSYDYdAPL~E~G~~~t~Ky~~lK~l~~fl~~~~-~~l~~~~~~~~~~~~~~~~~i~~t~lr~~~~~~Fyvvrh~~~~ 416 (1003)
T 3og2_A 338 GYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSP-GYITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRHANYS 416 (1003)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCT-HHHHSEECCCBSSSSSSCSSEEEEEEECSSSCEEEEEEESSTT
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH-HHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC
T ss_conf 413346788446467758347899999999875383-7645564658876134898638999864898559999815788
Q ss_pred CCE----EEEEC--CEEECCCC---------CCEEECC-----CCCCEEEECCEE-------------------------
Q ss_conf 424----99962--60201699---------5112138-----986112102110-------------------------
Q 003490 384 SAA----RVLFN--NMHYNLPP---------WSISVLP-----DCRNVVFNTAKV------------------------- 418 (816)
Q Consensus 384 ~~~----~v~f~--~~~~~~p~---------~svsil~-----dc~~v~f~ta~v------------------------- 418 (816)
... +++.. .+.+++|. +...|++ ...+++|.||+|
T Consensus 417 s~~~~~~~l~l~ts~G~~tiP~~~g~ltL~grdskI~vtdy~~g~~~L~YSTAevlT~~~~~~~~vlvlyg~~Ge~~E~a 496 (1003)
T 3og2_A 417 STDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQELHEFA 496 (1003)
T ss_dssp CCSCEEECEEECCTTCCEEECTTSCCEEECTTCEEEEEEEEEETTEEEEEESSEEEEEEECSSCEEEEEEECTTCEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCEEEEEEECCCCCCEEEE
T ss_conf 77761289994278876786788972788886555985013248848999724117889989988999978899834899
Q ss_pred ---------------------------------CC-C-------------------------------------------
Q ss_conf ---------------------------------11-0-------------------------------------------
Q 003490 419 ---------------------------------GV-Q------------------------------------------- 421 (816)
Q Consensus 419 ---------------------------------~~-q------------------------------------------- 421 (816)
+- +
T Consensus 497 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~l~v~l~dr~~A~~~W~~~~~~~~~~~~~~~~~ 576 (1003)
T 3og2_A 497 VKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSLVIYMVDRNSAYNYWVPTLPGSGKQSAYGSSL 576 (1003)
T ss_dssp ESCCSTTCSSCCCEEEECSSCEEEECTTCCEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCBCCCSSTTGGGCSCS
T ss_pred EECCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 93344445678873642787058746895899988537964999979999999706887641355346887645434567
Q ss_pred -----------CCCCC----------------------C-CCCC----------------------------------CC
Q ss_conf -----------22111----------------------2-3221----------------------------------12
Q 003490 422 -----------TSQME----------------------M-LPAN----------------------------------AE 433 (816)
Q Consensus 422 -----------~~~~~----------------------~-~~~~----------------------------------~~ 433 (816)
+-+|+ . .+.. +.
T Consensus 577 ~~~~~vlV~g~yLvRsA~~~g~~l~l~GD~~~tt~lev~~~p~~v~~v~wNG~~~~~~~~~~g~~~~~~~~~~~~i~lP~ 656 (1003)
T 3og2_A 577 MNPDSVIINGGYLIRSVAIKGNALSVQADFNVTTPLEIIGIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHVQVPE 656 (1003)
T ss_dssp SSCCBCEEECCSEEEEEEEETTEEEEEEEBSSCCCEEEESCCTTCCEEEETTEEECCEECTTSCEEECCCCCCCCCCCCC
T ss_pred CCCCCEEEECCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEEECCCCCCCCCCC
T ss_conf 88872899788379998971999999843589813799936877548999999851486378757998327787654887
Q ss_pred --CCCCCCC---CCCCCCCCCC--------C------CCCCC--CCHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
Q ss_conf --2344433---3343247899--------8------65555--300100587998547999999518999644468987
Q 003490 434 --MFSWESY---FEDISSLDDS--------S------TFTTQ--GLLEQINVTRDASDYLWYITSVDIGSSESFLHGGEL 492 (816)
Q Consensus 434 --~~~w~~~---~e~~~~~~~~--------~------~~~~~--~~~Eql~~t~d~sgYlwY~T~v~~~~~~~~~~~g~~ 492 (816)
.+.|... +|-.+..+|. . |.+.+ ....+++. ++|.+|||.+|+....+ +.
T Consensus 657 L~~l~Wk~~dslPE~~~~ydDs~W~~A~~~~t~n~~~p~~~p~~Lya~dYGf---h~G~~wYRG~F~a~~~~------~~ 727 (1003)
T 3og2_A 657 LTKLKWYKVDSLPEIRSNYDDSRWPLANLRTSNNTYAPLKTPVSLYGSDYGF---HAGTLLFRGRFTARTAR------QQ 727 (1003)
T ss_dssp GGGSCCEEEESCGGGSTTCCCTTSCBCCCSCCCCSSSCCCSSSCCBGGGGTC---CSSCEEEEEEEECSSSS------EE
T ss_pred CCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCC---CCCCEEEEEEEECCCCC------EE
T ss_conf 7888714227886568999843260667656568556789984757645676---44878986189778871------48
Q ss_pred CEEEECC-CCEEEEEEECCEEEEEEECCCC--CCEEEEEEEEECCCC-CCEEEEEEECCCCC-CC--CCCCCCCCCCCCC
Q ss_conf 5488389-4439999999999999975334--420389856530699-75799998537964-55--5687844543102
Q 003490 493 PTLIVQS-TGHALHIFINGQLSGSAFGTRE--ARRFMYTGKVNLRAG-RNKIALLSVAVGLP-NV--GGHYETWNTGILG 565 (816)
Q Consensus 493 ~~L~v~~-~~d~~~vfVNg~~iG~~~g~~~--~~~~~~~~~i~l~~G-~n~L~iLve~~Gr~-N~--G~~~e~~~kGI~G 565 (816)
..|.+++ .+..+.|||||+|+|+..|... ..++++.+| .|+.| .|+|+|+++|||+. ++ |..-.+.++||++
T Consensus 728 v~L~~~GG~af~~sVWLNG~flGs~~g~g~~~~~~~~~~lP-~L~~g~~NVLtV~vDn~G~d~~w~~G~d~~k~PRGi~~ 806 (1003)
T 3og2_A 728 LFLSTQGGSAFASSVWLNDRFIGSFTGFDAASAANSSYTLD-RLVRGRRYILTVVVDSTGLDENWTTGDDSMKAPRGILD 806 (1003)
T ss_dssp EEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEEC-SCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEEE
T ss_pred EEEEECCCCCCCCEEEECCEEECCCCCCCCCCCCCEEEECC-CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 99998151243448999997822554788656566699787-55679960899999288765564667554448875000
Q ss_pred CEEEECCCCCCCCCCCCCCEEEC------------------CCCCCCCCCCCCCCCCCCCCCCC--------CCCC-CCC
Q ss_conf 47970346885247548927961------------------58521133558898887532323--------3222-258
Q 003490 566 PVALHGLDQGKWDLSWQKWTYQV------------------GLRGEAMNLVSPNGISSVEWMQA--------SLAV-QRQ 618 (816)
Q Consensus 566 ~V~l~g~~~g~~dLs~~~W~y~v------------------gL~gE~~~~~~~~~~~~~~W~~~--------~~~~-~~~ 618 (816)
.+|.|......++ .|+.+. ||.+|+.++|+| +.+...|.+. ++.. ...
T Consensus 807 -~~l~g~~~~~~~~---~Wki~Gn~GGe~~~D~vRGplNeGGly~ER~GwHLP-g~~~~~W~~~~~~~~~~~sp~~g~~~ 881 (1003)
T 3og2_A 807 -YALTSSSGANVSI---SWKLTGNLGGEDYRDVFRGPLNEGGLFFERQGFHLP-SPPLSDFTHGPSSSSSSSSPLDGIAH 881 (1003)
T ss_dssp -EEEEETTSCBCCC---EEEEESSTTTTSCSCTTTCSSSCCSSHHHHHTTTSS-SCCGGGSBCCCTTSTTCCCTTTCBSS
T ss_pred -EECCCCCCCCCCC---EEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf -0523788776630---589841358865678665665588655774132389-88943233244454456784557788
Q ss_pred CCCEEEEEEEEC--C-CCCC-CEEEEECC-----CCCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 883499999868--9-9999-81896378-----7328999977542231003556988886556686787665789996
Q 003490 619 QPLMWHKAYFNA--P-EGDE-PLALDMEG-----MGKGQIWINGQSVGRYWTAYAKGDCNGCNYVGGYRPTKCQLGCGQP 689 (816)
Q Consensus 619 ~~~twYkt~F~~--p-~g~d-pv~Ldl~g-----~gKG~vwVNG~niGRYW~~~~~g~~~~c~y~G~y~~~kc~~~cg~P 689 (816)
.+.+||+|+|++ | .+.| |+.+.+.. -.+-++||||+++|||-+. +| |
T Consensus 882 ~Gv~fyrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv~~-----------iG-------------P 937 (1003)
T 3og2_A 882 AGIAFYAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGKYVSN-----------IG-------------P 937 (1003)
T ss_dssp SEEEEEEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEEEETT-----------TC-------------C
T ss_pred CCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECEEEEEECCC-----------CC-------------C
T ss_conf 84579987852689965671038999777988763589999702021022178-----------78-------------8
Q ss_pred CEEEEECCCCCCC-CCCCEEEEE----EECCCCCCCEEEEEE
Q ss_conf 1134522866556-775269999----746999951399732
Q 003490 690 TQRWYHVPRSWLK-PTQNFLVVF----EELGGNPSRISLVKR 726 (816)
Q Consensus 690 qQtlYhVP~~wLk-~g~N~LVif----Ee~gg~p~~I~~~t~ 726 (816)
|.++- ||..+|+ .|.|+|.|- |+.|+.+..+.+...
T Consensus 938 Qt~Fp-vP~GILn~~G~NtialalWa~~~~ga~~~~~~L~~~ 978 (1003)
T 3og2_A 938 QTEFP-VPEGILDYNGDNWIGVALWALESRGAKVPGLALKSK 978 (1003)
T ss_dssp CCEEE-ECBTTBCTEEEEEEEEEEEECSTTCBCCSCEEEEEC
T ss_pred CCEEC-CCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEC
T ss_conf 60305-992011279962699999842688887771599974
No 6
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=1.00 E-value=1 Score=305.35 Aligned_cols=170 Identities=16% Similarity=0.279 Sum_probs=141.0
Q ss_pred CCEEEEEECCEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECEECCCCCCCCCEEEECCCCHHHHHHH
Q ss_conf 40149991570999897969999986299999756999999999879988996100564478896033316100999999
Q 003490 24 IHCSVTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIK 103 (816)
Q Consensus 24 ~~~~v~~d~~~~~idG~~~~l~sG~iHy~R~~~e~W~d~l~k~K~~GlNtV~tyvfWn~hEp~~G~ydF~G~~dl~~fl~ 103 (816)
....++.++.+|++||||++++||++|+++..++.+++++++||++|+|+|++||+|+.|||+||+|||+ +|++||+
T Consensus 40 p~~~i~~~~~~f~lnGkPf~i~gg~~H~~~~y~r~~~~~W~~mKa~G~NtVr~~V~W~~hEP~~G~yDF~---~LD~~ld 116 (552)
T 3u7v_A 40 PQLVTKDGRHALMVDGAPFLMLAAQVNNSSAWPSQMAKVWPAIEKVGANTVQVPIAWEQIEPVEGQFDFS---YLDLLLE 116 (552)
T ss_dssp CEEEEETTEEEEEETTEEECEEEEECCTTCCSGGGHHHHHHHHHHHTCSEEEEEEEHHHHCSBTTBCCCH---HHHHHHH
T ss_pred CEEEEECCEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCHH---HHHHHHH
T ss_conf 8299978968898999899999887079888633119999999980998899986243248989846806---4999999
Q ss_pred HHHHCCCEEEEECCCEEEEECCCCC---CCCCCCCCCCE--EEECCC-----------HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9998297899821822000118898---87311545984--752499-----------6679999999999999977066
Q 003490 104 TIQKAGLYAHLRIGPYVCAEWNFGG---FPVWLKYVPGI--SFRTDN-----------EPFKRAMQGFTEKIVNLMKSEN 167 (816)
Q Consensus 104 la~e~GL~Vilr~GPYicaEw~~GG---~P~WL~~~p~i--~~Rt~~-----------~~y~~~~~~~~~~i~~~i~~~~ 167 (816)
+|+++||+|||| ||+||++|| +|.||.++|++ ++|+.+ +.|++++++|+.+|+++++++
T Consensus 117 la~e~GL~VIL~----i~aeW~~ggta~~P~WL~~d~~~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r- 191 (552)
T 3u7v_A 117 QARERKVRLVLL----WFGTWKNSSPSYAPEWVKLDDKRFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAK- 191 (552)
T ss_dssp HHHHTTCEEEEE----EEEEEETTBCTTSCHHHHTCTTTSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHCCCEEEEE----ECCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 999879999998----412014688767880565176657524889996751479886789999999999999999997-
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 33136985598612443454221248233889999999999
Q 003490 168 LFESQGGPIILSQIENEYGAQSKLLGAAGHNYMTWAAKMAV 208 (816)
Q Consensus 168 l~~~~gGpII~~QIENEyg~~~~~y~~~~~~y~~~l~~~~~ 208 (816)
+ .++|||||||||||||++. +++.|++.++++++
T Consensus 192 -~-~~~p~VI~wQIeNEyG~~g-----~~~~Y~~~~~~aFR 225 (552)
T 3u7v_A 192 -D-AAQKTVIMVQVENETGTYG-----SVRDFGPAAQKVFN 225 (552)
T ss_dssp -H-TTTCCEEEEEEEESCSBSS-----CSSCCSHHHHHHHH
T ss_pred -H-CCCCCEEEEEECCCCCCCC-----CCCHHHHHHHHHHH
T ss_conf -1-8999489999615677777-----73215199999999
No 7
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=1.00 E-value=1 Score=214.22 Aligned_cols=240 Identities=13% Similarity=0.139 Sum_probs=156.8
Q ss_pred EEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECEECCCCCCC-CCEEEECCCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 79699999862999997569999999998799889961005644788-96033316100999999999829789982182
Q 003490 40 QRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPS-PGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGP 118 (816)
Q Consensus 40 ~~~~l~sG~iHy~R~~~e~W~d~l~k~K~~GlNtV~tyvfWn~hEp~-~G~ydF~G~~dl~~fl~la~e~GL~Vilr~GP 118 (816)
..+.++.++.+....+++.|+++|++||++|+|+|+++|.|+.|||+ ||+|||+ .+++||++|+++||+||+++++
T Consensus 12 ~~~vmlp~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~---~~d~~id~a~~~GL~viv~L~~ 88 (516)
T 1vem_A 12 KAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFS---YAQRFAQSVKNAGMKMIPIIST 88 (516)
T ss_dssp EEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCH---HHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEEECC
T ss_conf 7499805655289999999999999999739999998423454138899936369---9999999999779989999311
Q ss_pred EEEEE----CCCCCCCCCCCCC-C--CEEEECCC----HHH-----HHHHHHHHHHHHHHHHHCCCCCCCCCCEEE----
Q ss_conf 20001----1889887311545-9--84752499----667-----999999999999997706633136985598----
Q 003490 119 YVCAE----WNFGGFPVWLKYV-P--GISFRTDN----EPF-----KRAMQGFTEKIVNLMKSENLFESQGGPIIL---- 178 (816)
Q Consensus 119 YicaE----w~~GG~P~WL~~~-p--~i~~Rt~~----~~y-----~~~~~~~~~~i~~~i~~~~l~~~~gGpII~---- 178 (816)
|+|+| |.++++|.||.++ | ++.+++.+ +.+ -......+.++++.++ +.+..+ ++||+
T Consensus 89 h~c~g~~g~~~~~~lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la--~r~~~~-~~vI~eI~v 165 (516)
T 1vem_A 89 HQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFA--AAMKPY-KDVIAKIYL 165 (516)
T ss_dssp SCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHH--HHTGGG-GGGBCCEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HHHCCC-CCEEEEEEC
T ss_conf 01377767787789997787259964326688999898453542346763899999999999--997438-998999622
Q ss_pred ------------ECCCCCCCCCCC----CCC-CCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------------612443454221----248-233889999999999829974225417878997532278887567778
Q 003490 179 ------------SQIENEYGAQSK----LLG-AAGHNYMTWAAKMAVEMGTGVPWVMCKEEDAPDPVINSCNGFYCDAFT 241 (816)
Q Consensus 179 ------------~QIENEyg~~~~----~y~-~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~~p~~vi~t~ng~~~~~~~ 241 (816)
+|||||||.... .|. .+.+.+.+|+++.+ | +++-. -... |....+|.
T Consensus 166 glG~~GelryPs~qv~NE~g~~g~~~~~~y~~~~~~~fr~~l~~~y---g-tl~~l-----------n~aW-g~~~~~~~ 229 (516)
T 1vem_A 166 SGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKY---G-SLNEV-----------NKAW-GTKLISEL 229 (516)
T ss_dssp CCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHH---S-SHHHH-----------HHHH-TCCCSSGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHC---C-CHHHH-----------HHHH-CCCCCCHH
T ss_conf 4553454356554333576787765420048999999999999862---8-77778-----------8976-87978898
Q ss_pred CC-CCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEE------EEEEEEECCCCCCCC
Q ss_conf 79-999991653115643444489877689789999999999819823------344475246788977
Q 003490 242 PN-QPYKPTIWTEAWSGWFTEFGGPIHQRPVQDLAFAAARFIQKGGSF------INYYMYHGGTNFGRS 303 (816)
Q Consensus 242 ~~-~p~~P~~~tE~~~Gwf~~wG~~~~~r~~e~~~~~~~~~~~~g~s~------~NyYM~hGGTNfG~~ 303 (816)
.. .|..+ ..++++||+++||.......++.++....++++.+.++ +.+..-..|.+|-..
T Consensus 230 ~i~~P~~~--~~~~~~gw~s~~~~df~~f~s~~l~~~~~~~l~~a~~~f~~~~~~~~~~kv~g~hw~y~ 296 (516)
T 1vem_A 230 AILPPSDG--EQFLMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYN 296 (516)
T ss_dssp GCCSCSCH--HHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTT
T ss_pred HHCCCCCC--CCCCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCC
T ss_conf 82786556--54357983366507298856378999999999987875488768428998474201688
No 8
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=1.00 E-value=1 Score=209.42 Aligned_cols=286 Identities=16% Similarity=0.234 Sum_probs=191.7
Q ss_pred EEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECE-ECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 796999998629999975699999999987998899610-0564478896033316100999999999829789982182
Q 003490 40 QRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYV-FWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGP 118 (816)
Q Consensus 40 ~~~~l~sG~iHy~R~~~e~W~d~l~k~K~~GlNtV~tyv-fWn~hEp~~G~ydF~G~~dl~~fl~la~e~GL~Vilr~GP 118 (816)
.+.++++|.+|+.+++++.|+++|++||++|+|+|++++ .|+.+||++|+|||+ +|+++|++|+++||+|||++++
T Consensus 6 ~~~~~~G~~y~pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~f~---~ld~~i~~~~~~Gi~vil~~~~ 82 (675)
T 3tty_A 6 FPKIWYGGDYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFT---WLDDIIERLTKENIYLCLATST 82 (675)
T ss_dssp SCSCEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBCCH---HHHHHHHHHHHTTCEEEEECCT
T ss_pred CCCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCHH---HHHHHHHHHHHCCCEEEEECCC
T ss_conf 8876570057916499899999999999739988999411244218769863889---9999999999879999996787
Q ss_pred EEEEECCCCCCCCCCCCCC-CE--------EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 2000118898873115459-84--------75249966799999999999999770663313698559861244345422
Q 003490 119 YVCAEWNFGGFPVWLKYVP-GI--------SFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYGAQS 189 (816)
Q Consensus 119 YicaEw~~GG~P~WL~~~p-~i--------~~Rt~~~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEyg~~~ 189 (816)
+.+.+|-....|.|+..+. +. ....++|.|++++.+++++|+++++++ ++||+|||+|||+..
T Consensus 83 ~~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~-------p~Vi~w~v~NE~g~~- 154 (675)
T 3tty_A 83 GAHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDH-------PQIVMWHVSNEYGGY- 154 (675)
T ss_dssp TSCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTTC-------TTEEEEECSSSCCCC-
T ss_pred CCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-------CCEEEEEECCCCCCC-
T ss_conf 778733443387515666899680368756789999999999999999999973889-------968999975666787-
Q ss_pred CCCCCCCHHHHHHHHHHHHH-------CCC-------------CCCEE---------ECCCC------------------
Q ss_conf 12482338899999999998-------299-------------74225---------41787------------------
Q 003490 190 KLLGAAGHNYMTWAAKMAVE-------MGT-------------GVPWV---------MCKEE------------------ 222 (816)
Q Consensus 190 ~~y~~~~~~y~~~l~~~~~~-------~g~-------------~vp~~---------~~~~~------------------ 222 (816)
+.+..|.++|.+||++++.. -|+ ..|-. +....
T Consensus 155 ~y~~~~~~~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y~~w~ei~~P~~~~~~~~~~~~~~p~~~lD~~rF~~~~~~~~~~ 234 (675)
T 3tty_A 155 CYCDNCEKQFRVWLKERYGTLEALNKAWNTSFWSHTFYDWDEIVAPNALSEEWSGNRTNFQGISLDYRRFQSDSLLECFK 234 (675)
T ss_dssp CCSHHHHHHHHHHHHHHHSSHHHHHHHTTTTGGGCCCSSGGGCCCCSTTTTEETTTEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 68989999999999988657999999867552357557798716985656554445667858999999999999999999
Q ss_pred --------CCCC-CCC-CCC---CCCC-------C-----CCCC-----------------CCCCCCCCEEEECCCCCCC
Q ss_conf --------8997-532-278---8875-------6-----7778-----------------7999999165311564344
Q 003490 223 --------DAPD-PVI-NSC---NGFY-------C-----DAFT-----------------PNQPYKPTIWTEAWSGWFT 260 (816)
Q Consensus 223 --------~~p~-~vi-~t~---ng~~-------~-----~~~~-----------------~~~p~~P~~~tE~~~Gwf~ 260 (816)
..|+ +|. |.. .+.+ + |.+. .....+|.+.+|..+| ..
T Consensus 235 ~~~d~iR~~~P~~pvt~N~~~~~~~~D~~~~a~~~Dvvs~D~Yp~~~~~~~~~a~~~dl~R~~~~g~p~~~mE~~~~-~~ 313 (675)
T 3tty_A 235 MERDELKRWTPDIPVTTNLMGFYPELDYFKWAKEMDVVSWDNYPSMDTPFSFTAMAHNLMRGLKSGQPFMLMEQTPG-VQ 313 (675)
T ss_dssp HHHHHHHHHCTTSCEECEECTTCTTSCHHHHHTTCSSCEEECCCCTTSCHHHHHHHHHHHHHTTTTCCEEEEECCSS-CC
T ss_pred HHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-CC
T ss_conf 99999997589987797626566776999996159899977888867888899989988876047998699657778-88
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 44898776897899999999998198233444752467889779999733467789987867988862379999999999
Q 003490 261 EFGGPIHQRPVQDLAFAAARFIQKGGSFINYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYGHLKELHRAI 340 (816)
Q Consensus 261 ~wG~~~~~r~~e~~~~~~~~~~~~g~s~~NyYM~hGGTNfG~~~G~~~~~TSYDYdApl~E~G~~~~pKy~~lr~l~~~i 340 (816)
.|..-.....+..+.......++.|+..+.|+-++...+ -.-.| -.+.|+-.|.+.++.|.+++++...+
T Consensus 314 ~w~~~~~~~~pg~~r~~~~~~~A~Ga~~v~~f~wr~~~~---------g~E~~-h~g~~~~~g~~~~r~~~ev~~~~~~l 383 (675)
T 3tty_A 314 NWQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSVG---------ACEKY-HGAVIEHVGHEHTRVFRECAELGKEL 383 (675)
T ss_dssp TTSSBCCCCCTTHHHHHHHHHHHTTEEEEEESCSBCCCS---------GGGTT-SCCSBCTTCSSCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC---------CHHHH-HCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 885778889950999999999856257676341168888---------55665-02645878998846999999999999
Q ss_pred HHHHCCC
Q ss_conf 7633023
Q 003490 341 KMCERAL 347 (816)
Q Consensus 341 ~~~~~~l 347 (816)
+..++.+
T Consensus 384 ~~l~~~~ 390 (675)
T 3tty_A 384 QQLGDTI 390 (675)
T ss_dssp HHHTTTT
T ss_pred HHHHHHH
T ss_conf 9756664
No 9
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=1.00 E-value=1 Score=203.91 Aligned_cols=269 Identities=13% Similarity=0.179 Sum_probs=186.7
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECE-ECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCEEEE
Q ss_conf 99998629999975699999999987998899610-05644788960333161009999999998297899821822000
Q 003490 44 LFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYV-FWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCA 122 (816)
Q Consensus 44 l~sG~iHy~R~~~e~W~d~l~k~K~~GlNtV~tyv-fWn~hEp~~G~ydF~G~~dl~~fl~la~e~GL~Vilr~GPYica 122 (816)
++++.+|+.+++++.|++++++||++|+|+|++++ .|+.+||+||+|||+ +|+++|++|+++||+||+++.
T Consensus 1 ~~G~~y~pe~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~d~~---~ld~~ld~a~~~Gi~vil~~~----- 72 (645)
T 1kwg_A 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIATLAAEGLKVVLGTP----- 72 (645)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCH---HHHHHHHHHHTTTCEEEEECS-----
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEECC-----
T ss_conf 977767966589789999999999829988999245142048889945869---999999999978998999589-----
Q ss_pred ECCCCCCCCCCCC-CCCEE----------------EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
Q ss_conf 1188988731154-59847----------------524996679999999999999977066331369855986124434
Q 003490 123 EWNFGGFPVWLKY-VPGIS----------------FRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEY 185 (816)
Q Consensus 123 Ew~~GG~P~WL~~-~p~i~----------------~Rt~~~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEy 185 (816)
.+++|.|+.. .|+.. ...+++.|++++++++++|+++++++ +.||+|||+||+
T Consensus 73 ---~~~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~-------p~V~~w~i~NE~ 142 (645)
T 1kwg_A 73 ---TATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGL-------EAVAGFQTDNEY 142 (645)
T ss_dssp ---TTSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTC-------TTEEEEECSSST
T ss_pred ---CCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-------CCEEEEEECCCC
T ss_conf ---8889856762598526667998676667645679999999999999999999985999-------818999936867
Q ss_pred CCCC--CCCC-CCCHHHHHHH-----------------------------------------------------------
Q ss_conf 5422--1248-2338899999-----------------------------------------------------------
Q 003490 186 GAQS--KLLG-AAGHNYMTWA----------------------------------------------------------- 203 (816)
Q Consensus 186 g~~~--~~y~-~~~~~y~~~l----------------------------------------------------------- 203 (816)
+... ..|+ .+.++|.+||
T Consensus 143 ~~~~~~~~y~~~~~~~f~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~~ 222 (645)
T 1kwg_A 143 GCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFN 222 (645)
T ss_dssp TTTTTSCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 77878886899999999999998866999999875745234555768554898766777884788889999999999999
Q ss_pred ---HHHHHHCCCCCCEEECCCCCC-C-C-----CCCC--CCCCCCCC---C-----------CC-CCC------------
Q ss_conf ---999998299742254178789-9-7-----5322--78887567---7-----------78-799------------
Q 003490 204 ---AKMAVEMGTGVPWVMCKEEDA-P-D-----PVIN--SCNGFYCD---A-----------FT-PNQ------------ 244 (816)
Q Consensus 204 ---~~~~~~~g~~vp~~~~~~~~~-p-~-----~vi~--t~ng~~~~---~-----------~~-~~~------------ 244 (816)
.+..++.+.++|.+++.-... . + +.+. ..+ .|.. . |. ...
T Consensus 223 ~~~~~~ir~~~p~~pvt~n~~~~~~~~d~~~~a~~lDv~~~d-~Y~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~dl~r 301 (645)
T 1kwg_A 223 RLQVEILRAHAPGKFVTHNFMGFFTDLDAFALAQDLDFASWD-SYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYR 301 (645)
T ss_dssp HHHHHHHHHHSTTCEEECEECTTCCSSCHHHHGGGSSSEEEE-ECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEEEC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999999998689985798477677776899987449599977-7886444433333321112345675567777777887
Q ss_pred --CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --999916531156434444898776897899999999998198233444752467889779999733467789987867
Q 003490 245 --PYKPTIWTEAWSGWFTEFGGPIHQRPVQDLAFAAARFIQKGGSFINYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEY 322 (816)
Q Consensus 245 --p~~P~~~tE~~~Gwf~~wG~~~~~r~~e~~~~~~~~~~~~g~s~~NyYM~hGGTNfG~~~G~~~~~TSYDYdApl~E~ 322 (816)
..+|.+.+|+.+|... |+.......+..+.......++.|+..++|+-+. ..++...+|+++ +|++.
T Consensus 302 ~~~~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~Ga~~~~~f~w~---------~~~~~~E~~~~g-~l~~~ 370 (645)
T 1kwg_A 302 GVGRGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRWR---------QAPFAQEQMHAG-LHRPD 370 (645)
T ss_dssp HHTTTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSB---------CCSSSTTTTSCC-SBCTT
T ss_pred HHCCCCEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEC---------CCCCCCCCCCCC-CCCCC
T ss_conf 605998798568888888-7667888993099999999985578778886312---------689971014434-33878
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q ss_conf 988862379999999999763
Q 003490 323 GLIRQPKYGHLKELHRAIKMC 343 (816)
Q Consensus 323 G~~~~pKy~~lr~l~~~i~~~ 343 (816)
|.+ +++|.+++++...++..
T Consensus 371 g~~-~~~~~e~~~~~~~l~~~ 390 (645)
T 1kwg_A 371 SAP-DQGFFEAKRVAEELAAL 390 (645)
T ss_dssp SCB-CHHHHHHHHHHHHHHTC
T ss_pred CCC-CHHHHHHHHHHHHHHHH
T ss_conf 992-88999999999999863
No 10
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=1.00 E-value=1 Score=166.96 Aligned_cols=180 Identities=17% Similarity=0.354 Sum_probs=137.4
Q ss_pred EECCEEEECCEEEEEEEEEEECCCC-CHHHHHHHHHHHHHCCCCEEEECEEC----------CCCCCCCCEEE-------
Q ss_conf 9157099989796999998629999-97569999999998799889961005----------64478896033-------
Q 003490 30 YDRKALLINGQRRILFSGSIHYPRS-TPDMWEDLIQKAKDGGLDVIETYVFW----------NVHEPSPGNYN------- 91 (816)
Q Consensus 30 ~d~~~~~idG~~~~l~sG~iHy~R~-~~e~W~d~l~k~K~~GlNtV~tyvfW----------n~hEp~~G~yd------- 91 (816)
.++..|.+||+|+.+.+..+||.+. +++.|++.|+.||++|+|+|++++|| ..+||.+|+||
T Consensus 15 ~~g~~F~ldGkp~~f~G~N~y~~~~~~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~ 94 (383)
T 3pzg_A 15 VPRGSHMLNGKEFRFIGSNNYYMHYKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISN 94 (383)
T ss_dssp ------------CCEEEEECSCTTTSCHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSS
T ss_pred CCCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 04998989999999988870245669999999999999976998899701156555566665433667985464334442
Q ss_pred -ECCCCHHHHHHHHHHHCCCEEEEECCCEEEEEC-CCCCCCCCCCCCCCE--EEECCCHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf -316100999999999829789982182200011-889887311545984--752499667999999999999997706-
Q 003490 92 -FEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEW-NFGGFPVWLKYVPGI--SFRTDNEPFKRAMQGFTEKIVNLMKSE- 166 (816)
Q Consensus 92 -F~G~~dl~~fl~la~e~GL~Vilr~GPYicaEw-~~GG~P~WL~~~p~i--~~Rt~~~~y~~~~~~~~~~i~~~i~~~- 166 (816)
.++-..|+++|++|+++||+|||.+ +.+| ++||.|.|+....+. ...-+++.++++.+++++.|++++...
T Consensus 95 ~~~~~~~LD~~i~~A~k~GI~viL~l----~~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~t 170 (383)
T 3pzg_A 95 AQNGFERLDYTIAKAKELGIKLIIVL----VNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYT 170 (383)
T ss_dssp CEEHHHHHHHHHHHHHHHTCEEEEEC----CBSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTT
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEC----CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 47899999999999998899899973----66654557864113324898635556899999999999999985535456
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHCCCCCCE
Q ss_conf 63313698559861244345422124823388999999999---982997422
Q 003490 167 NLFESQGGPIILSQIENEYGAQSKLLGAAGHNYMTWAAKMA---VEMGTGVPW 216 (816)
Q Consensus 167 ~l~~~~gGpII~~QIENEyg~~~~~y~~~~~~y~~~l~~~~---~~~g~~vp~ 216 (816)
.+.+.+.+.|++|||.||+++... .....+.+|+++|+ ++.+-..|.
T Consensus 171 G~~y~~~p~I~~w~l~NEp~~~~~---~~~~~~~~w~~~~~~~IR~~Dp~~lV 220 (383)
T 3pzg_A 171 GVPYREEPTIMAWELANELRCETD---KSGNTLVEWVKEMSSYIKSLDPNHLV 220 (383)
T ss_dssp CCBGGGCTTEEEEESCBTCCCTTC---TTSHHHHHHHHHHHHHHHHHCSSSEE
T ss_pred CCCCCCCCCEEEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 731079985789995377776667---64799999999999999965899669
Done!