Query 003491
Match_columns 816
No_of_seqs 330 out of 1632
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 21:06:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/003491.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_122-125//hhsearch_pdb/003491hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2heh_A KIF2C protein; kinesin, 1.0 1 1 686.1 26.4 323 203-542 50-386 (387)
2 1v8k_A Kinesin-like protein KI 1.0 1 1 685.9 27.0 324 203-543 70-407 (410)
3 1ry6_A Internal kinesin; kines 1.0 1 1 667.1 25.2 326 205-546 1-339 (360)
4 2vvg_A Kinesin-2; motor protei 1.0 1 1 666.3 29.7 334 203-548 3-345 (350)
5 3lre_A Kinesin-like protein KI 1.0 1 1 665.9 28.0 331 197-538 3-355 (355)
6 3bfn_A Kinesin-like protein KI 1.0 1 1 662.6 25.2 333 199-549 16-358 (388)
7 2owm_A Nckin3-434, related to 1.0 1 1 662.6 29.5 339 197-546 31-421 (443)
8 2zfi_A Kinesin-like protein KI 1.0 1 1 660.4 27.3 329 203-545 3-361 (366)
9 3b6u_A Kinesin-like protein KI 1.0 1 1 660.1 26.7 335 198-548 15-363 (372)
10 1x88_A Kinesin-like protein KI 1.0 1 1 657.7 23.0 331 199-546 3-358 (359)
No 1
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=1.00 E-value=1 Score=686.09 Aligned_cols=323 Identities=57% Similarity=0.887 Sum_probs=302.6
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEECC-EEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCHHHH
Q ss_conf 9980899982999931101599757998099-089937874345454321047993003089998578765310001776
Q 003491 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSDN-ALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPT 281 (816)
Q Consensus 203 ~~~IrV~vRvRPl~~~E~~~~~~~ii~v~~~-~v~i~~p~~~~~l~~~~~~~~F~FD~VFd~~asQeeVY~~~v~pLV~~ 281 (816)
.++|+|+|||||+++.|...++.+++.+.+. .+++++|+.+++.+.+.+.+.|.||+||+++++|++||+.+++|+|+.
T Consensus 50 ~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~sQ~~Vy~~~~~plv~~ 129 (387)
T 2heh_A 50 EHRICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQT 129 (387)
T ss_dssp CCSEEEEEEECCCCHHHHHTTCCBCEECCBSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHH
T ss_conf 99859999889989478325995089988998799958875545444556607861289832787333016667999999
Q ss_pred HHCCCCCEEEECCCCCCCCCCCCCC------------CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEECCCCC
Q ss_conf 5227871285226789997611278------------9246899999996254346851599997678667854024554
Q 003491 282 IFQRTKATCFAYGQTGSGKTFTMQP------------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGE 349 (816)
Q Consensus 282 vl~G~N~tIfAYGqTGSGKTyTM~G------------l~~ra~~dLF~~l~~~~~~~~~f~V~vSf~EIYnEkV~DLL~~ 349 (816)
+|+|||+||||||||||||||||+| ++++++++||..+......+..|.|++||+|||||+|+|||++
T Consensus 130 ~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~ 209 (387)
T 2heh_A 130 IFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNK 209 (387)
T ss_dssp HHTTCEEEEEEESCTTSSHHHHHC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTT
T ss_pred HHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEECCCC
T ss_conf 86699648997568999988671367777776667762004688999886113345751899999998519768998889
Q ss_pred CCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 22223101599957990408999435889999999997226766679988889865899999996300000002479999
Q 003491 350 RKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGN 429 (816)
Q Consensus 350 ~~~L~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~~~~~~~~~~~~~~~~~ 429 (816)
+.++.+++|++++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+.
T Consensus 210 ~~~l~i~ed~~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~-------------- 275 (387)
T 2heh_A 210 KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAK-------------- 275 (387)
T ss_dssp TEECEEEECTTCCEEEETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESS--------------
T ss_pred CCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEC--------------
T ss_conf 866148996999889469789981899999999999985378144757577565529999999977--------------
Q ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHC-CCCCCC
Q ss_conf 9886489999999678988898888775030388878449799999999998099998558999320212210-589860
Q 003491 430 ESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDS-FVGNSK 508 (816)
Q Consensus 430 ~~~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~~~hIPyRdSKLT~LLkds-LgGnsk 508 (816)
....|+|+|||||||||..++...++++++|++.||+||++|++||.||..++.|||||+||||+||||+ |||||+
T Consensus 276 ---~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPYRdSKLTrlLqdsllGgnsk 352 (387)
T 2heh_A 276 ---GRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSR 352 (387)
T ss_dssp ---SSEEEEEEEEECCCCC---------------CHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGGSSTTEE
T ss_pred ---CEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCE
T ss_conf ---72565799997877765323456554203668887488999999999985589978742667788776630389871
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 7999950799989788999999999852332377
Q 003491 509 TVMISCISPNVGSCEHTLNTLRYADRVKSLSKSG 542 (816)
Q Consensus 509 T~mIa~ISP~~~~~eETLsTLrfA~RvK~I~~~~ 542 (816)
|+||+||||+..+++||++||+||+|+|+|+...
T Consensus 353 T~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~ 386 (387)
T 2heh_A 353 TCMIATISPGISSCEYTLNTLRYADRVKELSPHS 386 (387)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHCC-----
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999994886000899999999999962471789
No 2
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=1.00 E-value=1 Score=685.92 Aligned_cols=324 Identities=57% Similarity=0.881 Sum_probs=303.2
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEECC-EEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCHHHH
Q ss_conf 9980899982999931101599757998099-089937874345454321047993003089998578765310001776
Q 003491 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSDN-ALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPT 281 (816)
Q Consensus 203 ~~~IrV~vRvRPl~~~E~~~~~~~ii~v~~~-~v~i~~p~~~~~l~~~~~~~~F~FD~VFd~~asQeeVY~~~v~pLV~~ 281 (816)
.++|+|+|||||++..|...++.+++.+.+. .+++++|+.+++.+.+.+.+.|.||+||+++++|++||+.++.|+|+.
T Consensus 70 ~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~v~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~tQ~~Vy~~~~~plV~~ 149 (410)
T 1v8k_A 70 EHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQT 149 (410)
T ss_dssp CCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99849999949889467405996279978998799926865545344556507860189802787310648888889999
Q ss_pred HHCCCCCEEEECCCCCCCCCCCCCC------------CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEECCCCC
Q ss_conf 5227871285226789997611278------------9246899999996254346851599997678667854024554
Q 003491 282 IFQRTKATCFAYGQTGSGKTFTMQP------------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGE 349 (816)
Q Consensus 282 vl~G~N~tIfAYGqTGSGKTyTM~G------------l~~ra~~dLF~~l~~~~~~~~~f~V~vSf~EIYnEkV~DLL~~ 349 (816)
+|+|||+||||||||||||||||+| ++++++++||..+......+..|.|++||+|||||+|+|||++
T Consensus 150 ~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~ 229 (410)
T 1v8k_A 150 IFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNK 229 (410)
T ss_dssp HHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTT
T ss_pred HHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEEECCCC
T ss_conf 74698435896468999998685047787775556750335689999998511035863899999998408889997789
Q ss_pred CCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 22223101599957990408999435889999999997226766679988889865899999996300000002479999
Q 003491 350 RKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGN 429 (816)
Q Consensus 350 ~~~L~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~~~~~~~~~~~~~~~~~ 429 (816)
+..+.+++|+.++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+.
T Consensus 230 ~~~l~i~ed~~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~-------------- 295 (410)
T 1v8k_A 230 KAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTK-------------- 295 (410)
T ss_dssp TEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESS--------------
T ss_pred CCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEC--------------
T ss_conf 877438987999858559889980899999999999975377333657787777429999999967--------------
Q ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHC-CCCCCC
Q ss_conf 9886489999999678988898888775030388878449799999999998099998558999320212210-589860
Q 003491 430 ESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDS-FVGNSK 508 (816)
Q Consensus 430 ~~~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~~~hIPyRdSKLT~LLkds-LgGnsk 508 (816)
....|+|+|||||||||..++...++++++|++.||+||++|++||.||..++.|||||+||||+||||+ |||||+
T Consensus 296 ---~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hIPYRdSKLTrLLqdsllGgnsk 372 (410)
T 1v8k_A 296 ---GRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSR 372 (410)
T ss_dssp ---SSEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSSEE
T ss_pred ---CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCE
T ss_conf ---85056899997887664322455554056889888688999999999985589978743555678876502589965
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 79999507999897889999999998523323777
Q 003491 509 TVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGN 543 (816)
Q Consensus 509 T~mIa~ISP~~~~~eETLsTLrfA~RvK~I~~~~~ 543 (816)
|+||+||||+..+++|||+||+||+|+|+|.-.|+
T Consensus 373 T~mIa~iSP~~~~~~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 373 TCMIAMISPGISSCEYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHHTTC----
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999969861218999999999999644899877
No 3
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=667.07 Aligned_cols=326 Identities=48% Similarity=0.779 Sum_probs=300.4
Q ss_pred CEEEEEEECCCCCHHHCCCCCCEEEEECC-EEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCHHHHHH
Q ss_conf 80899982999931101599757998099-08993787434545432104799300308999857876531000177652
Q 003491 205 KIRVVVRKRPLNKKELSRKEEDIVTVSDN-ALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIF 283 (816)
Q Consensus 205 ~IrV~vRvRPl~~~E~~~~~~~ii~v~~~-~v~i~~p~~~~~l~~~~~~~~F~FD~VFd~~asQeeVY~~~v~pLV~~vl 283 (816)
+|||+|||||+++.|...+..+++.+.++ .+.+.+|+..++.+.+.+.+.|.||+||+++++|++||+.+++|+|+.++
T Consensus 1 ~IrV~vRvRP~~~~E~~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~~ 80 (360)
T 1ry6_A 1 MIKVVVRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLY 80 (360)
T ss_dssp CEEEEEEECCCCHHHHHTTCCBCEEEEETTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHC
T ss_conf 91999989999957851599519998899789992886543555454550688316956788778889877633345530
Q ss_pred C-CCCCEEEECCCCCCCCCCCCCC-----------CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEECCCCCCC
Q ss_conf 2-7871285226789997611278-----------924689999999625434685159999767866785402455422
Q 003491 284 Q-RTKATCFAYGQTGSGKTFTMQP-----------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERK 351 (816)
Q Consensus 284 ~-G~N~tIfAYGqTGSGKTyTM~G-----------l~~ra~~dLF~~l~~~~~~~~~f~V~vSf~EIYnEkV~DLL~~~~ 351 (816)
+ |+|+||||||||||||||||+| ++||++++||..+... .....|.|++||+|||||+|+|||++++
T Consensus 81 ~~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~v~DLL~~~~ 159 (360)
T 1ry6_A 81 ENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIY-DKDNTKGIFISFYEIYCGKLYDLLQKRK 159 (360)
T ss_dssp HHCCEEEEEEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHH-CSSSCEEEEEEEEEEETTEEEESCCC--
T ss_pred CCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCEEEECCCCCC
T ss_conf 488015999607899999878766777787667981789999999998752-4577369999999711885677656776
Q ss_pred CCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 22310159995799040899943588999999999722676667998888986589999999630000000247999998
Q 003491 352 KLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGNES 431 (816)
Q Consensus 352 ~L~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~~~~~~~~~~~~~~~~~~~ 431 (816)
.+.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+..
T Consensus 160 ~~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~--------------- 224 (360)
T 1ry6_A 160 MVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDIN--------------- 224 (360)
T ss_dssp ---------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETT---------------
T ss_pred CCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECC---------------
T ss_conf 64046738997898672899958999999999998655102122046887663499999999635---------------
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCEEE
Q ss_conf 86489999999678988898888775030388878449799999999998099998558999320212210589860799
Q 003491 432 RGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVM 511 (816)
Q Consensus 432 ~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~~~hIPyRdSKLT~LLkdsLgGnskT~m 511 (816)
.....|+|+|||||||||..++...++++++|+..||+||++|++||.||..++.|||||+||||+||||+|||||+|+|
T Consensus 225 ~~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~m 304 (360)
T 1ry6_A 225 KNTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIM 304 (360)
T ss_dssp TTEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEEEE
T ss_pred CCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 87406679999788776545455556640678988778899999999998568997765267889999997489971999
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99507999897889999999998523323777777
Q 003491 512 ISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTKK 546 (816)
Q Consensus 512 Ia~ISP~~~~~eETLsTLrfA~RvK~I~~~~~~~~ 546 (816)
|+||||+..+++||++||+||+|+|+|++.+..++
T Consensus 305 Ia~isP~~~~~~ETlsTLrfA~rak~i~n~~~~~~ 339 (360)
T 1ry6_A 305 IANISPTISCCEQTLNTLRYSSRVKNKGNSKLEGK 339 (360)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHCC---------
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99968873238999999999999863556766687
No 4
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=666.28 Aligned_cols=334 Identities=35% Similarity=0.534 Sum_probs=299.7
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEEC--CEEEEECCCCCCCC-CCCCCCEEEEEEEEECCCCCHHHHHHHHHHCHH
Q ss_conf 998089998299993110159975799809--90899378743454-543210479930030899985787653100017
Q 003491 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSD--NALTVHEPKLKVDL-TAYVEKHEFCFDAVLDERVTNDEVYRVTVEPII 279 (816)
Q Consensus 203 ~~~IrV~vRvRPl~~~E~~~~~~~ii~v~~--~~v~i~~p~~~~~l-~~~~~~~~F~FD~VFd~~asQeeVY~~~v~pLV 279 (816)
.++|+|+||+||+++.|...+..+++.+.+ ..+++..|...... ......+.|.||+||+++++|++||+.+++|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 82 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI 82 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 99869999909799133204995389984999889996045544334457785276678897997610689987899999
Q ss_pred HHHHCCCCCEEEECCCCCCCCCCCCCC------CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEECCCCCCCCC
Q ss_conf 765227871285226789997611278------92468999999962543468515999976786678540245542222
Q 003491 280 PTIFQRTKATCFAYGQTGSGKTFTMQP------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKL 353 (816)
Q Consensus 280 ~~vl~G~N~tIfAYGqTGSGKTyTM~G------l~~ra~~dLF~~l~~~~~~~~~f~V~vSf~EIYnEkV~DLL~~~~~L 353 (816)
+.+++|||+||||||||||||||||+| ++||++++||..+... ..+..|.|++||+|||||+|+|||+++..+
T Consensus 83 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~~l 161 (350)
T 2vvg_A 83 DAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSS-SSNQNFLVIGSYLELYNEEIRDLIKNNTKL 161 (350)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTC-CTTEEEEEEEEEEEEETTEEEETTTTEEEE
T ss_pred HHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEECCEEEECCCCCCCC
T ss_conf 9985788526886468999998785358766755889999999999865-368757999999999287888855677684
Q ss_pred CCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 31015999579904089994358899999999972267666799888898658999999963000000024799999886
Q 003491 354 CMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGNESRG 433 (816)
Q Consensus 354 ~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~~~~~~~~~~~~~~~~~~~~~ 433 (816)
.+++|+.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+.....+ ...
T Consensus 162 ~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~----------~~~ 231 (350)
T 2vvg_A 162 PLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIEN----------KEV 231 (350)
T ss_dssp CEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC--------------CE
T ss_pred EEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC----------CCC
T ss_conf 2567489988815877997499999999999998414600145788887652999999999504678----------761
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEE
Q ss_conf 48999999967898889888877503038887844979999999999809999855899932021221058986079999
Q 003491 434 KVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMIS 513 (816)
Q Consensus 434 ~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~~~hIPyRdSKLT~LLkdsLgGnskT~mIa 513 (816)
...|+|+|||||||||..+++..+ .+++|+..||+||++|++||.||..++.|||||+||||+||||+|||||+|+||+
T Consensus 232 ~~~skl~lVDLAGSEr~~~t~~~g-~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~ 310 (350)
T 2vvg_A 232 IRVGKLNLVDLAGSERQSKTGATG-ETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCA 310 (350)
T ss_dssp EEEEEEEEEECCCCCC----------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEE
T ss_pred EEEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEE
T ss_conf 788999999689887554456507-7889998875899999999999973899887645588899898608996289999
Q ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 50799989788999999999852332377777768
Q 003491 514 CISPNVGSCEHTLNTLRYADRVKSLSKSGNTKKDQ 548 (816)
Q Consensus 514 ~ISP~~~~~eETLsTLrfA~RvK~I~~~~~~~~~~ 548 (816)
||||...+++||++||+||+|+|+|++.|..+.+.
T Consensus 311 ~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~ 345 (350)
T 2vvg_A 311 NISPASTNYDETMSTLRYADRAKQIKNKPRINEDP 345 (350)
T ss_dssp EECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSC
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf 96884001899999999999985445666125782
No 5
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=1.00 E-value=1 Score=665.95 Aligned_cols=331 Identities=35% Similarity=0.534 Sum_probs=294.7
Q ss_pred CCCCCCCCCEEEEEEECCCCCHHHCCCCCCEEEEECCEEEEECCCCCC-C------------CCCCCCCEEEEEEEEECC
Q ss_conf 111389998089998299993110159975799809908993787434-5------------454321047993003089
Q 003491 197 NARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDNALTVHEPKLKV-D------------LTAYVEKHEFCFDAVLDE 263 (816)
Q Consensus 197 ~~~~~~~~~IrV~vRvRPl~~~E~~~~~~~ii~v~~~~v~i~~p~~~~-~------------l~~~~~~~~F~FD~VFd~ 263 (816)
+..++..++|+|+|||||++.+|...+..+++.+.++.+.+.+|.... . .....+.+.|.||+||++
T Consensus 3 ~~~~d~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~ 82 (355)
T 3lre_A 3 VTEEDLCHHMKVVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDE 82 (355)
T ss_dssp ---------CEEEEEECCCCHHHHHTTCCBSEEECSSSEEEEC------------------------CCEEEECSEEECT
T ss_pred CCHHHCCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCHHCCCCCCEEEECEEECC
T ss_conf 67022367878999939699578755995499965996698568877411203555444430002678716870568799
Q ss_pred CCCHHHHHHHHHHCHHHHHHCCCCCEEEECCCCCCCCCCCCCC------CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEE
Q ss_conf 9985787653100017765227871285226789997611278------9246899999996254346851599997678
Q 003491 264 RVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTMQP------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFE 337 (816)
Q Consensus 264 ~asQeeVY~~~v~pLV~~vl~G~N~tIfAYGqTGSGKTyTM~G------l~~ra~~dLF~~l~~~~~~~~~f~V~vSf~E 337 (816)
+++|++||+.+++|+|+.+|+|||+||||||||||||||||+| ++||++.+||..+.... ....|.|++||+|
T Consensus 83 ~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~-~~~~~~v~vS~~E 161 (355)
T 3lre_A 83 TSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADEPGVMYLTMLHLYKCMDEIK-EEKICSTAVSYLE 161 (355)
T ss_dssp TCCHHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTT-TTEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHC-CCCEEEEEEEEEE
T ss_conf 887689999999999998737994699971889997242231689888701024467777665204-5735999999999
Q ss_pred EECCEEECCCCCCCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEC
Q ss_conf 66785402455422223101599957990408999435889999999997226766679988889865899999996300
Q 003491 338 IYGGKLFDLLGERKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIE 417 (816)
Q Consensus 338 IYnEkV~DLL~~~~~L~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~~~~~ 417 (816)
||||+|+|||++..++.+++|+.++++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+...
T Consensus 162 IYnE~i~DLL~~~~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~ 241 (355)
T 3lre_A 162 VYNEQIRDLLVNSGPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDK 241 (355)
T ss_dssp EETTEEEESSSCCCCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEET
T ss_pred EECCEEEECCCCCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECC
T ss_conf 98787799767877723688489998853336995399999999999987327743265768778782999999999657
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCC
Q ss_conf 0000024799999886489999999678988898888775030388878449799999999998099---9985589993
Q 003491 418 VKESFRRNNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDND---QIHIPFRGSK 494 (816)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~---~~hIPyRdSK 494 (816)
... .......|+|+|||||||||..+++..+ .+++|+..||+||++|++||.||.++ ..|||||+||
T Consensus 242 ~~~---------~~~~~~~skl~lVDLAGSEr~~~t~~~g-~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSk 311 (355)
T 3lre_A 242 TAS---------INQNVRIAKMSLIDLAGSERASTSGAKG-TRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSK 311 (355)
T ss_dssp TSC---------TTCCCCCEEEEEEECCCCCC------------------CHHHHHHHHHHHHHC--------CCGGGSH
T ss_pred CCC---------CCCCEEEEEEEEEECCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 788---------8877779999999798877576778733-789999999899999987999987145889868763378
Q ss_pred CCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 20212210589860799995079998978899999999985233
Q 003491 495 LTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSL 538 (816)
Q Consensus 495 LT~LLkdsLgGnskT~mIa~ISP~~~~~eETLsTLrfA~RvK~I 538 (816)
||+||||+|||||+|+||+||||+..+++||++||+||+|+|+|
T Consensus 312 LT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 312 LTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp HHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 88988986489965999999488622389999999999985659
No 6
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=662.60 Aligned_cols=333 Identities=31% Similarity=0.444 Sum_probs=292.6
Q ss_pred CCCCCCCEEEEEEECCCCCHHHCCCCCCEEEE-ECCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHC
Q ss_conf 13899980899982999931101599757998-09908993787434545432104799300308999857876531000
Q 003491 199 RENNVAKIRVVVRKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEP 277 (816)
Q Consensus 199 ~~~~~~~IrV~vRvRPl~~~E~~~~~~~ii~v-~~~~v~i~~p~~~~~l~~~~~~~~F~FD~VFd~~asQeeVY~~~v~p 277 (816)
.....++|+|+|||||+++.|...+...++.. ++..+.+..+.. ..+.+.|.||+||+++++|++||+.+++|
T Consensus 16 ~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~------~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~p 89 (388)
T 3bfn_A 16 FQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRN------HQETLKYQFDAFYGERSTQQDIYAGSVQP 89 (388)
T ss_dssp SSSCCCCCEEEEEECCCC-----------------------------------CEEEEECSEEECTTCCHHHHHHHHTGG
T ss_pred CCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCC------CCCEEEEECCEEECCCCCHHHHHHHHHHH
T ss_conf 568999979999779899145346998639955998599956888------87705987236956789775778998888
Q ss_pred HHHHHHCCCCCEEEECCCCCCCCCCCCC------CCCHHHHHHHHHHHCCCC--CCCCEEEEEEEEEEEECCEEECCCCC
Q ss_conf 1776522787128522678999761127------892468999999962543--46851599997678667854024554
Q 003491 278 IIPTIFQRTKATCFAYGQTGSGKTFTMQ------PLPLRAAEDLVRLLHQPV--YRNQRFKLWLSYFEIYGGKLFDLLGE 349 (816)
Q Consensus 278 LV~~vl~G~N~tIfAYGqTGSGKTyTM~------Gl~~ra~~dLF~~l~~~~--~~~~~f~V~vSf~EIYnEkV~DLL~~ 349 (816)
+|+.+|+|||+||||||||||||||||+ |++||++.+||..+.... .....|.|++||+|||||+|+|||++
T Consensus 90 lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~ 169 (388)
T 3bfn_A 90 ILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDP 169 (388)
T ss_dssp GHHHHTTTCCEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSC
T ss_pred HHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCC
T ss_conf 88876169656676116888999768656755664168999999999987423377714899999999988864560016
Q ss_pred C-CCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCC
Q ss_conf 2-222310159995799040899943588999999999722676667998888986589999999630000000247999
Q 003491 350 R-KKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDG 428 (816)
Q Consensus 350 ~-~~L~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~~~~~~~~~~~~~~~~ 428 (816)
. ..+.+++|+.++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+......
T Consensus 170 ~~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~-------- 241 (388)
T 3bfn_A 170 ASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAP-------- 241 (388)
T ss_dssp SSCBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTT--------
T ss_pred CCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC--------
T ss_conf 788845998699998853605999589999999999975026522364778777773999999998226888--------
Q ss_pred CCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 99886489999999678988898888775030388878449799999999998099998558999320212210589860
Q 003491 429 NESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSK 508 (816)
Q Consensus 429 ~~~~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~~~hIPyRdSKLT~LLkdsLgGnsk 508 (816)
.....|+|+|||||||||..+++..+ .+.+|+..||+||++|++||.||..+..|||||+||||+||||+|||||+
T Consensus 242 ---~~~~~skL~lVDLAGSEr~~~t~~~g-~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnsk 317 (388)
T 3bfn_A 242 ---FRQREGKLYLIDLAGSEDNRRTGNKG-LRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAH 317 (388)
T ss_dssp ---CCEEEEEEEEEECCCTTC---------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCE
T ss_pred ---CCEEEEEEEEEECCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf ---73368899999898776655456755-11477767506399999999999669998867565889999986089962
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 79999507999897889999999998523323777777689
Q 003491 509 TVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTKKDQG 549 (816)
Q Consensus 509 T~mIa~ISP~~~~~eETLsTLrfA~RvK~I~~~~~~~~~~~ 549 (816)
|+||+||||...+++||++||+||+|+|+|++.|..+.+..
T Consensus 318 T~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~ 358 (388)
T 3bfn_A 318 SILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQ 358 (388)
T ss_dssp EEEEEEECCSGGGHHHHHHHHHHHCSEEEEC----------
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 89999979850008999999999999851757673567899
No 7
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=662.55 Aligned_cols=339 Identities=35% Similarity=0.495 Sum_probs=292.2
Q ss_pred CCCCCCCCCEEEEEEECCCCCHHHCCCCCCEEEEECC--EEEEECCCCCC-------CCCCCCCCEEEEEEEEECC----
Q ss_conf 1113899980899982999931101599757998099--08993787434-------5454321047993003089----
Q 003491 197 NARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDN--ALTVHEPKLKV-------DLTAYVEKHEFCFDAVLDE---- 263 (816)
Q Consensus 197 ~~~~~~~~~IrV~vRvRPl~~~E~~~~~~~ii~v~~~--~v~i~~p~~~~-------~l~~~~~~~~F~FD~VFd~---- 263 (816)
....+..++|+|+|||||+++.|...+..+++.++.. .+++..|.... ......+.+.|.||+||++
T Consensus 31 ~~~~~~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~ 110 (443)
T 2owm_A 31 FVSKDPGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTE 110 (443)
T ss_dssp ---CCCCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTT
T ss_pred CCCCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCC
T ss_conf 76678998949999939999688626994599975898627995588765433333212336677268527382787767
Q ss_pred ---CCCHHHHHHHHHHCHHHHHHCCCCCEEEECCCCCCCCCCCCC------CCCHHHHHHHHHHHCCCC--CCCCEEEEE
Q ss_conf ---998578765310001776522787128522678999761127------892468999999962543--468515999
Q 003491 264 ---RVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTMQ------PLPLRAAEDLVRLLHQPV--YRNQRFKLW 332 (816)
Q Consensus 264 ---~asQeeVY~~~v~pLV~~vl~G~N~tIfAYGqTGSGKTyTM~------Gl~~ra~~dLF~~l~~~~--~~~~~f~V~ 332 (816)
.++|++||+.++.|+|+.+|+|||+||||||||||||||||+ ||+||++++||..+.... ..+..|.|+
T Consensus 111 ~~~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~ 190 (443)
T 2owm_A 111 DEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVK 190 (443)
T ss_dssp STTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 76578799998763246888863687427998678899998886468777753799999999988765213677349999
Q ss_pred EEEEEEECCEEECCCCCC------CCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
Q ss_conf 976786678540245542------22231015999579904089994358899999999972267666799888898658
Q 003491 333 LSYFEIYGGKLFDLLGER------KKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHA 406 (816)
Q Consensus 333 vSf~EIYnEkV~DLL~~~------~~L~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHa 406 (816)
+||+|||||+|+|||++. ..|.|+||+.++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+
T Consensus 191 vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~ 270 (443)
T 2owm_A 191 VSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHA 270 (443)
T ss_dssp EEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEE
T ss_pred EEEEEEECCEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
T ss_conf 99999988975685676345786534430377999995268779982899999999999973378633758776677719
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-
Q ss_conf 9999999630000000247999998864899999996789888988887750303888784497999999999980999-
Q 003491 407 ILQLAIKKHIEVKESFRRNNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQ- 485 (816)
Q Consensus 407 If~I~V~~~~~~~~~~~~~~~~~~~~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~~- 485 (816)
||+|+|.+...... ........|+|+|||||||||..+++..+ .+.+|+..||+||++|++||.||..++
T Consensus 271 Ifti~v~~~~~~~~--------~~~~~~~~skL~lVDLAGSER~~~t~~~g-~rlkE~~~INkSL~aLg~vI~aL~~~~~ 341 (443)
T 2owm_A 271 VFTIMLKQIHHDLE--------TDDTTERSSRIRLVDLAGSERAKSTEATG-QRLREGSNINKSLTTLGRVIAALADPKS 341 (443)
T ss_dssp EEEEEEEEEC---------------CCEEEEEEEEEECCCCCC---------------CCSSHHHHHHHHHHHHHCC---
T ss_pred EEEEEEEEEECCCC--------CCCCCEEEEEEEEEECCCCCCCCCCCCCC-CCCCCHHHHCHHHHHHHHHHHHHHCCCC
T ss_conf 99999998603567--------88740688779999798875356567766-4121100105789999999999860455
Q ss_pred ---------------------CCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf ---------------------98558999320212210589860799995079998978899999999985233237777
Q 003491 486 ---------------------IHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNT 544 (816)
Q Consensus 486 ---------------------~hIPyRdSKLT~LLkdsLgGnskT~mIa~ISP~~~~~eETLsTLrfA~RvK~I~~~~~~ 544 (816)
.|||||+||||+||||+|||||+|+||+||||+ +++||++||+||+|+|+|++.+.+
T Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~v 419 (443)
T 2owm_A 342 SASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVV 419 (443)
T ss_dssp ----------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 555444322234333445677745574547688888862799708999981643--078999999999998544563335
Q ss_pred CC
Q ss_conf 77
Q 003491 545 KK 546 (816)
Q Consensus 545 ~~ 546 (816)
+.
T Consensus 420 N~ 421 (443)
T 2owm_A 420 NQ 421 (443)
T ss_dssp CC
T ss_pred CC
T ss_conf 13
No 8
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=1.00 E-value=1 Score=660.44 Aligned_cols=329 Identities=34% Similarity=0.513 Sum_probs=294.4
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEEEECCC--------CCHHHHHHHH
Q ss_conf 99808999829999311015997579980990899378743454543210479930030899--------9857876531
Q 003491 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDER--------VTNDEVYRVT 274 (816)
Q Consensus 203 ~~~IrV~vRvRPl~~~E~~~~~~~ii~v~~~~v~i~~p~~~~~l~~~~~~~~F~FD~VFd~~--------asQeeVY~~~ 274 (816)
..+|+|+|||||++..|...+..+++.++++.+.+..|+... ...+.|.||+||+++ ++|++||+.+
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~-----~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~ 77 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPK-----ETPKSFSFDYSYWSHTSPEDINYASQKQVYRDI 77 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCTT-----SCCEEEECSEEEECSSCTTSSSCCCHHHHHHHT
T ss_pred CCCCEEEEECCCCCHHHCCCCCCEEEEECCCCEEEECCCCCC-----CCCEEEECCEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 998089998899983551579976999779967995367777-----776278624696057666544567699999999
Q ss_pred HHCHHHHHHCCCCCEEEECCCCCCCCCCCCC--------CCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEECC
Q ss_conf 0001776522787128522678999761127--------89246899999996254346851599997678667854024
Q 003491 275 VEPIIPTIFQRTKATCFAYGQTGSGKTFTMQ--------PLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDL 346 (816)
Q Consensus 275 v~pLV~~vl~G~N~tIfAYGqTGSGKTyTM~--------Gl~~ra~~dLF~~l~~~~~~~~~f~V~vSf~EIYnEkV~DL 346 (816)
++|+|+.+|+|||+||||||||||||||||+ ||+||++++||..+......+..|.|++||+|||||+|+||
T Consensus 78 ~~plv~~~l~G~N~tifAYGqTGSGKTyTm~G~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DL 157 (366)
T 2zfi_A 78 GEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDL 157 (366)
T ss_dssp HHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEET
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEC
T ss_conf 99999997469714899858999988458647876577866999999999987640267706999999999608847891
Q ss_pred CCCC--CCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCC
Q ss_conf 5542--22231015999579904089994358899999999972267666799888898658999999963000000024
Q 003491 347 LGER--KKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRR 424 (816)
Q Consensus 347 L~~~--~~L~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~~~~~~~~~~~~ 424 (816)
|++. ..+.+++++..+++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+......
T Consensus 158 L~~~~~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~---- 233 (366)
T 2zfi_A 158 LNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAE---- 233 (366)
T ss_dssp TCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTT----
T ss_pred CCCCCCCCCEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCC----
T ss_conf 2355678856888699987976989999779999999999976224611265777777645999999999604677----
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC------------CCCCCCCCC
Q ss_conf 79999988648999999967898889888877503038887844979999999999809------------999855899
Q 003491 425 NNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDN------------DQIHIPFRG 492 (816)
Q Consensus 425 ~~~~~~~~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~------------~~~hIPyRd 492 (816)
........|+|+|||||||||..+++..+ .+++|+..||+||++|++||.||.+ +..|||||+
T Consensus 234 ----~~~~~~~~skL~lVDLAGSEr~~~t~~~g-~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRd 308 (366)
T 2zfi_A 234 ----TNITTEKVSKISLVDLAGSERADSTGAKG-TRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRD 308 (366)
T ss_dssp ----TTCEEEEEEEEEEEECCCGGGC------C-CCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGG
T ss_pred ----CCCCCEEEEEEEEEECCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf ----87541367689999689886455467876-3004465676789999999999871234543333456677464333
Q ss_pred CCCCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 93202122105898607999950799989788999999999852332377777
Q 003491 493 SKLTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTK 545 (816)
Q Consensus 493 SKLT~LLkdsLgGnskT~mIa~ISP~~~~~eETLsTLrfA~RvK~I~~~~~~~ 545 (816)
||||+||||+|||||+|+||+||||+..+++||++||+||+|+|+|++.+...
T Consensus 309 SkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~ 361 (366)
T 2zfi_A 309 SVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVN 361 (366)
T ss_dssp SHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC---------
T ss_pred CHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 28899999872899609999996887334999999999999984055888899
No 9
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=660.09 Aligned_cols=335 Identities=37% Similarity=0.537 Sum_probs=297.2
Q ss_pred CCCCCCCCEEEEEEECCCCCHHHCCCCCCEEEEEC--CEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHH
Q ss_conf 11389998089998299993110159975799809--9089937874345454321047993003089998578765310
Q 003491 198 ARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSD--NALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTV 275 (816)
Q Consensus 198 ~~~~~~~~IrV~vRvRPl~~~E~~~~~~~ii~v~~--~~v~i~~p~~~~~l~~~~~~~~F~FD~VFd~~asQeeVY~~~v 275 (816)
......++|+|+||+||++..|...+...++.+.. +.+.+..|... .....+.|.||+||+++++|++||+.++
T Consensus 15 ~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~----~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~ 90 (372)
T 3b6u_A 15 YFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGT----AHEMPKTFTFDAVYDWNAKQFELYDETF 90 (372)
T ss_dssp ------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCT----TTCCCEEEECSEEECTTCCHHHHHHHTH
T ss_pred CCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCC----CCCCCEEEECCEEECCCCCHHHHHHHHH
T ss_conf 667899983999986989935530499638999589987999778877----7778438876869688674178988787
Q ss_pred HCHHHHHHCCCCCEEEECCCCCCCCCCCCCC---------CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEECC
Q ss_conf 0017765227871285226789997611278---------9246899999996254346851599997678667854024
Q 003491 276 EPIIPTIFQRTKATCFAYGQTGSGKTFTMQP---------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDL 346 (816)
Q Consensus 276 ~pLV~~vl~G~N~tIfAYGqTGSGKTyTM~G---------l~~ra~~dLF~~l~~~~~~~~~f~V~vSf~EIYnEkV~DL 346 (816)
+|+|+.+|+|||+||||||||||||||||+| ++||++.+||..+.. ..+..|.|++||+|||||+|+||
T Consensus 91 ~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~~v~vS~~EIYnE~i~DL 168 (372)
T 3b6u_A 91 RPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISR--SQNQQYLVRASYLEIYQEEIRDL 168 (372)
T ss_dssp HHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHT--CSSCEEEEEEEEEEEETTEEEET
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH--CCCCCEEEEEEEEEEECCEEEEC
T ss_conf 7778998679813588656899999875755899834488188999999998651--45773699998999967888997
Q ss_pred CCCC--CCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCC
Q ss_conf 5542--22231015999579904089994358899999999972267666799888898658999999963000000024
Q 003491 347 LGER--KKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRR 424 (816)
Q Consensus 347 L~~~--~~L~i~ed~~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~~~~~~~~~~~~ 424 (816)
|++. ..+.+++++.++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+.....
T Consensus 169 L~~~~~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~----- 243 (372)
T 3b6u_A 169 LSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGL----- 243 (372)
T ss_dssp TSSCTTCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC--------
T ss_pred CCCCCCCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC-----
T ss_conf 789777773689879996752898899926799999999999976672545577877764299999999960477-----
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHCC
Q ss_conf 7999998864899999996789888988887750303888784497999999999980999-985589993202122105
Q 003491 425 NNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQ-IHIPFRGSKLTEVLRDSF 503 (816)
Q Consensus 425 ~~~~~~~~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~~-~hIPyRdSKLT~LLkdsL 503 (816)
........|+|+|||||||||..+++..+ .+++|+..||+||++|++||.||.+++ .|||||+||||+||||+|
T Consensus 244 ----~~~~~~~~skL~lVDLAGSEr~~~t~~~g-~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsL 318 (372)
T 3b6u_A 244 ----DGENHIRVGKLNLVDLAGSERQAKTGAQG-ERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSL 318 (372)
T ss_dssp ------CCCEEEEEEEEEECCCCCE-----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTT
T ss_pred ----CCCCCEEEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
T ss_conf ----88762678899999798876554457515-4314675650649999999999863898878662208899999862
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 898607999950799989788999999999852332377777768
Q 003491 504 VGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTKKDQ 548 (816)
Q Consensus 504 gGnskT~mIa~ISP~~~~~eETLsTLrfA~RvK~I~~~~~~~~~~ 548 (816)
||||+|+||+||||...+++||++||+||+|+|+|++.|..+.+.
T Consensus 319 gGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~ 363 (372)
T 3b6u_A 319 GGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDP 363 (372)
T ss_dssp TSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC--
T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCH
T ss_conf 999548999996885247999999999999986455666255775
No 10
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=657.67 Aligned_cols=331 Identities=36% Similarity=0.521 Sum_probs=291.1
Q ss_pred CCCCCCCEEEEEEECCCCCHHHCCCCCCEEEEECC--EEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 13899980899982999931101599757998099--0899378743454543210479930030899985787653100
Q 003491 199 RENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDN--ALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVE 276 (816)
Q Consensus 199 ~~~~~~~IrV~vRvRPl~~~E~~~~~~~ii~v~~~--~v~i~~p~~~~~l~~~~~~~~F~FD~VFd~~asQeeVY~~~v~ 276 (816)
++...++|+|+|||||++..|...+...++.+... .+.+..+. .......+.|.||+||+++++|++||+.++.
T Consensus 3 ~~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~----~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~ 78 (359)
T 1x88_A 3 KEEKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGG----LADKSSRKTYTFDMVFGASTKQIDVYRSVVC 78 (359)
T ss_dssp ------CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEE----ETTEEEEEEEECSEEECTTCCHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEEEEECCC----CCCCCCCEEEECEEEEECCCCHHHHHHHHHH
T ss_conf 778999859999908999256304996499975998579983787----6677674487540798526745378999988
Q ss_pred CHHHHHHCCCCCEEEECCCCCCCCCCCCC-----------------CCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEE
Q ss_conf 01776522787128522678999761127-----------------8924689999999625434685159999767866
Q 003491 277 PIIPTIFQRTKATCFAYGQTGSGKTFTMQ-----------------PLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIY 339 (816)
Q Consensus 277 pLV~~vl~G~N~tIfAYGqTGSGKTyTM~-----------------Gl~~ra~~dLF~~l~~~~~~~~~f~V~vSf~EIY 339 (816)
|+|+.+|+|||+||||||||||||||||+ |++||++++||..+.. .+..|.|++||+|||
T Consensus 79 plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~---~~~~~~v~vS~~EIY 155 (359)
T 1x88_A 79 PILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD---NGTEFSVKVSLLEIY 155 (359)
T ss_dssp HHHHHHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS---SSEEEEEEEEEEEEE
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---CCCEEEEEEEEEEEE
T ss_conf 86898737982489984789998756885667766544444566687038999999987741---582599999999995
Q ss_pred CCEEECCCCCC----CCCCCCCCC--CCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 78540245542----222310159--995799040899943588999999999722676667998888986589999999
Q 003491 340 GGKLFDLLGER----KKLCMREDG--RQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIK 413 (816)
Q Consensus 340 nEkV~DLL~~~----~~L~i~ed~--~~~v~V~GLtev~V~S~eEv~~lL~~G~~~R~~~sT~~N~~SSRSHaIf~I~V~ 413 (816)
||+|+|||++. ..+.+++++ +++++|.||+++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.
T Consensus 156 nE~i~DLL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~ 235 (359)
T 1x88_A 156 NEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIH 235 (359)
T ss_dssp TTEEEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEE
T ss_pred CCEEEEHHCCCCCCCCCCEEEECCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf 76100121156555666058865577898898287899849999999999987751461225477877776289999998
Q ss_pred EEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 63000000024799999886489999999678988898888775030388878449799999999998099998558999
Q 003491 414 KHIEVKESFRRNNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGS 493 (816)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~skLsfVDLAGSER~~~t~~~~~~~~~E~~~INkSLlALg~vI~AL~~~~~hIPyRdS 493 (816)
....... .......|+|+|||||||||..+++..+ .+.+|+..||+||++|++||.||..+..|||||+|
T Consensus 236 ~~~~~~~---------~~~~~~~skL~lVDLAGSEr~~~t~~~g-~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdS 305 (359)
T 1x88_A 236 MKETTID---------GEELVKIGKLNLVDLAGSENIGRSGAVD-KRAREAGNINQSLLTLGRVITALVERTPHVPYRES 305 (359)
T ss_dssp EEEECTT---------SCEEEEEEEEEEEECCCCCC----------------CCCHHHHHHHHHHHHHHTTCSCCCGGGS
T ss_pred EECCCCC---------CCCEEEEEEEEEECCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 7435578---------8713778899998189987354358863-20177765307899999999998647997762256
Q ss_pred CCCHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 32021221058986079999507999897889999999998523323777777
Q 003491 494 KLTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLSKSGNTKK 546 (816)
Q Consensus 494 KLT~LLkdsLgGnskT~mIa~ISP~~~~~eETLsTLrfA~RvK~I~~~~~~~~ 546 (816)
|||+||||+|||||+|+||+||||+..+++||++||+||+|+|+|++.|.++.
T Consensus 306 kLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 306 KLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp HHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC---
T ss_pred HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 68899999758997299999978974568999999999999865667661477
Done!