Query 003492
Match_columns 816
No_of_seqs 413 out of 3416
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 00:27:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003492.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003492hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 1E-200 3E-205 1750.6 72.7 811 1-816 2-812 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 5E-193 1E-197 1687.0 74.7 783 24-811 1-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 1E-170 3E-175 1392.3 31.0 550 7-556 1-550 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 5.9E-57 1.3E-61 541.2 42.1 455 278-775 169-671 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 1E-58 2.2E-63 517.4 23.8 490 195-802 1-495 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 1.5E-50 3.3E-55 462.3 43.4 424 279-772 1-438 (439)
7 PLN02939 transferase, transfer 100.0 2.2E-45 4.8E-50 435.4 47.3 514 201-775 383-967 (977)
8 PRK00654 glgA glycogen synthas 100.0 1.5E-43 3.2E-48 407.8 37.5 426 279-774 1-462 (466)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 1.5E-42 3.3E-47 390.5 40.4 399 281-774 1-401 (405)
10 TIGR02095 glgA glycogen/starch 100.0 6.6E-42 1.4E-46 394.7 39.0 433 279-774 1-472 (473)
11 cd03800 GT1_Sucrose_synthase T 100.0 7.2E-41 1.6E-45 372.8 41.2 397 280-769 1-397 (398)
12 PLN02316 synthase/transferase 100.0 1.8E-40 3.9E-45 400.4 43.2 406 278-774 587-1033(1036)
13 PRK14098 glycogen synthase; Pr 100.0 8.8E-41 1.9E-45 386.0 37.5 438 276-774 4-485 (489)
14 PRK10307 putative glycosyl tra 100.0 3.8E-40 8.3E-45 372.8 40.1 396 279-775 1-408 (412)
15 cd03796 GT1_PIG-A_like This fa 100.0 2.5E-40 5.3E-45 373.0 37.2 366 280-775 1-368 (398)
16 cd03791 GT1_Glycogen_synthase_ 100.0 3.9E-40 8.5E-45 379.5 38.2 432 280-773 1-475 (476)
17 PRK14099 glycogen synthase; Pr 100.0 1.3E-39 2.8E-44 376.1 39.0 430 278-775 3-479 (485)
18 PRK15427 colanic acid biosynth 100.0 5.6E-39 1.2E-43 363.5 38.7 281 405-774 116-405 (406)
19 TIGR02149 glgA_Coryne glycogen 100.0 1.7E-38 3.6E-43 354.5 38.8 378 279-774 1-386 (388)
20 PLN02871 UDP-sulfoquinovose:DA 100.0 1.8E-38 4E-43 365.3 38.7 374 277-775 57-435 (465)
21 cd04962 GT1_like_5 This family 100.0 3.7E-38 8.1E-43 348.5 38.8 366 279-774 1-370 (371)
22 PRK15484 lipopolysaccharide 1, 100.0 1.6E-37 3.4E-42 348.8 38.6 375 277-775 1-378 (380)
23 cd03818 GT1_ExpC_like This fam 100.0 5E-37 1.1E-41 345.7 39.0 367 318-770 15-396 (396)
24 cd03805 GT1_ALG2_like This fam 100.0 4.4E-37 9.6E-42 343.5 37.2 386 279-768 1-392 (392)
25 TIGR03088 stp2 sugar transfera 100.0 7.3E-37 1.6E-41 340.5 37.0 365 280-774 3-372 (374)
26 cd05844 GT1_like_7 Glycosyltra 100.0 1.5E-36 3.3E-41 335.1 33.8 280 406-770 81-366 (367)
27 PRK15179 Vi polysaccharide bio 100.0 5.9E-36 1.3E-40 354.7 39.1 458 203-773 204-692 (694)
28 cd04955 GT1_like_6 This family 100.0 1.8E-35 3.9E-40 324.9 39.6 361 280-773 1-363 (363)
29 KOG1111 N-acetylglucosaminyltr 100.0 5.1E-37 1.1E-41 324.2 25.2 378 279-788 1-380 (426)
30 PRK15490 Vi polysaccharide bio 100.0 4.2E-36 9.1E-41 342.1 33.2 397 299-774 171-575 (578)
31 cd03792 GT1_Trehalose_phosphor 100.0 1.7E-35 3.7E-40 330.2 35.5 287 405-774 83-371 (372)
32 cd03819 GT1_WavL_like This fam 100.0 2.2E-35 4.7E-40 323.7 33.8 347 300-764 8-355 (355)
33 cd03821 GT1_Bme6_like This fam 100.0 1.2E-34 2.6E-39 314.9 38.1 373 280-770 1-375 (375)
34 cd03799 GT1_amsK_like This is 100.0 6.5E-34 1.4E-38 311.2 37.5 272 405-768 77-355 (355)
35 cd03802 GT1_AviGT4_like This f 100.0 7.6E-34 1.7E-38 308.9 36.8 333 279-773 1-335 (335)
36 cd03814 GT1_like_2 This family 100.0 1.1E-33 2.3E-38 308.4 37.3 363 280-773 1-364 (364)
37 cd03794 GT1_wbuB_like This fam 100.0 1.7E-33 3.7E-38 306.9 36.8 387 280-769 1-394 (394)
38 cd03801 GT1_YqgM_like This fam 100.0 4.1E-33 9E-38 299.9 39.2 373 280-772 1-373 (374)
39 cd04951 GT1_WbdM_like This fam 100.0 2.6E-33 5.6E-38 307.0 37.8 358 280-773 1-359 (360)
40 cd03795 GT1_like_4 This family 100.0 1.9E-33 4.1E-38 307.8 36.6 354 280-765 1-357 (357)
41 cd03813 GT1_like_3 This family 100.0 8.3E-35 1.8E-39 336.0 26.7 292 406-773 172-475 (475)
42 cd03807 GT1_WbnK_like This fam 100.0 1.6E-33 3.6E-38 304.9 34.6 363 280-773 1-365 (365)
43 cd03817 GT1_UGDG_like This fam 100.0 3.3E-33 7.1E-38 304.1 36.8 371 280-774 1-373 (374)
44 cd03822 GT1_ecORF704_like This 100.0 8.4E-33 1.8E-37 302.0 39.7 358 280-773 1-366 (366)
45 cd03812 GT1_CapH_like This fam 100.0 1.4E-33 3E-38 309.8 33.1 347 280-752 1-348 (358)
46 PLN02846 digalactosyldiacylgly 100.0 3.8E-33 8.2E-38 316.6 35.3 372 277-775 3-392 (462)
47 PRK09922 UDP-D-galactose:(gluc 100.0 1.3E-33 2.9E-38 314.0 30.9 348 279-774 1-355 (359)
48 cd03816 GT1_ALG1_like This fam 100.0 1.3E-32 2.8E-37 312.5 38.4 391 276-769 1-411 (415)
49 cd03825 GT1_wcfI_like This fam 100.0 4.8E-33 1E-37 305.5 33.6 343 279-774 1-364 (365)
50 cd03820 GT1_amsD_like This fam 100.0 2.7E-32 5.9E-37 292.8 36.1 345 280-769 1-347 (348)
51 PRK10125 putative glycosyl tra 100.0 1.4E-32 3E-37 311.2 33.0 278 405-774 92-404 (405)
52 cd03808 GT1_cap1E_like This fa 100.0 6.6E-32 1.4E-36 291.2 36.5 356 280-769 1-358 (359)
53 cd03809 GT1_mtfB_like This fam 100.0 1.6E-32 3.5E-37 299.6 31.7 365 280-770 1-365 (365)
54 cd03798 GT1_wlbH_like This fam 100.0 1.9E-31 4.1E-36 288.5 38.4 284 405-773 91-375 (377)
55 cd03806 GT1_ALG11_like This fa 100.0 6.1E-32 1.3E-36 307.4 35.7 377 281-766 3-418 (419)
56 cd03823 GT1_ExpE7_like This fa 100.0 1E-31 2.3E-36 291.6 35.3 353 280-773 1-358 (359)
57 PLN02949 transferase, transfer 100.0 2.4E-31 5.2E-36 305.0 39.6 235 468-774 214-456 (463)
58 cd03811 GT1_WabH_like This fam 100.0 3.6E-31 7.7E-36 284.2 33.8 351 280-760 1-352 (353)
59 TIGR03087 stp1 sugar transfera 100.0 5.6E-32 1.2E-36 305.0 28.0 284 405-773 102-395 (397)
60 TIGR02918 accessory Sec system 100.0 2.6E-31 5.6E-36 307.5 31.6 280 405-774 209-499 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 1.2E-30 2.6E-35 295.7 30.3 276 405-769 125-406 (407)
62 COG0297 GlgA Glycogen synthase 100.0 1.8E-29 3.8E-34 287.0 32.6 437 279-775 1-478 (487)
63 PLN02275 transferase, transfer 100.0 3.3E-29 7.2E-34 280.4 32.2 318 318-728 23-370 (371)
64 cd03804 GT1_wbaZ_like This fam 100.0 2.7E-29 5.8E-34 277.3 26.8 264 405-768 81-350 (351)
65 PLN02501 digalactosyldiacylgly 100.0 8.3E-29 1.8E-33 284.7 30.7 273 405-774 432-709 (794)
66 cd04949 GT1_gtfA_like This fam 100.0 9.2E-29 2E-33 275.0 29.4 273 406-768 98-372 (372)
67 PHA01630 putative group 1 glyc 100.0 1.4E-28 3.1E-33 271.1 25.9 258 413-775 52-331 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 3.6E-26 7.8E-31 261.1 31.3 331 405-774 146-586 (590)
69 PRK00726 murG undecaprenyldiph 99.9 1.9E-25 4.2E-30 247.9 32.8 343 279-773 2-356 (357)
70 PHA01633 putative glycosyl tra 99.9 2.5E-25 5.5E-30 244.0 31.1 225 471-770 89-335 (335)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 2E-25 4.3E-30 256.7 25.7 312 407-770 131-457 (460)
72 cd03785 GT1_MurG MurG is an N- 99.9 3.3E-24 7.1E-29 236.5 32.2 323 301-766 9-349 (350)
73 TIGR01133 murG undecaprenyldip 99.9 5.9E-24 1.3E-28 234.3 30.3 315 318-766 19-346 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 6.5E-24 1.4E-28 243.1 29.8 318 396-770 117-452 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 6.3E-23 1.4E-27 233.6 30.1 284 407-773 124-418 (425)
76 PF00534 Glycos_transf_1: Glyc 99.9 3.6E-23 7.8E-28 205.2 14.8 160 569-749 12-172 (172)
77 PRK13609 diacylglycerol glucos 99.9 9.1E-22 2E-26 220.6 27.4 262 406-773 103-370 (380)
78 PLN03063 alpha,alpha-trehalose 99.9 8.8E-22 1.9E-26 238.6 28.2 323 395-774 136-477 (797)
79 cd04950 GT1_like_1 Glycosyltra 99.9 2E-20 4.4E-25 209.7 32.8 266 404-772 99-369 (373)
80 PRK14501 putative bifunctional 99.9 9.1E-21 2E-25 229.5 26.8 321 396-775 123-463 (726)
81 cd01635 Glycosyltransferase_GT 99.9 2.3E-20 5E-25 189.8 24.4 121 577-713 109-229 (229)
82 PLN02605 monogalactosyldiacylg 99.9 4.3E-20 9.4E-25 207.7 27.6 262 406-771 99-378 (382)
83 TIGR02094 more_P_ylases alpha- 99.9 5.5E-20 1.2E-24 216.0 29.2 342 402-772 156-598 (601)
84 PRK13608 diacylglycerol glucos 99.8 2.3E-19 5E-24 202.6 28.0 262 406-773 103-370 (391)
85 COG0438 RfaG Glycosyltransfera 99.8 6.1E-19 1.3E-23 186.9 28.6 291 408-775 84-377 (381)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 1.6E-17 3.6E-22 190.2 30.7 313 407-770 132-478 (487)
87 TIGR00236 wecB UDP-N-acetylglu 99.8 7.7E-18 1.7E-22 188.0 22.4 275 406-770 85-363 (365)
88 PRK09814 beta-1,6-galactofuran 99.8 4.8E-17 1E-21 179.9 25.6 236 407-752 63-315 (333)
89 PRK00025 lpxB lipid-A-disaccha 99.8 1.6E-16 3.5E-21 177.8 27.1 250 406-751 84-357 (380)
90 KOG1387 Glycosyltransferase [C 99.8 5.4E-16 1.2E-20 164.0 28.9 289 405-771 148-455 (465)
91 cd04299 GT1_Glycogen_Phosphory 99.8 2.1E-16 4.6E-21 189.0 29.2 342 401-771 242-686 (778)
92 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 1.1E-16 2.5E-21 177.6 24.6 250 406-742 87-344 (363)
93 PLN03064 alpha,alpha-trehalose 99.7 1.2E-15 2.5E-20 185.1 28.3 317 396-770 221-557 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 1.4E-14 3E-19 168.5 26.4 169 572-771 319-518 (519)
95 PF13692 Glyco_trans_1_4: Glyc 99.6 4.6E-15 9.9E-20 141.3 9.5 130 572-729 2-133 (135)
96 PF05693 Glycogen_syn: Glycoge 99.5 4E-13 8.6E-18 153.7 22.7 329 406-774 142-581 (633)
97 TIGR00215 lpxB lipid-A-disacch 99.5 4.4E-12 9.4E-17 143.3 28.2 251 405-749 87-365 (385)
98 KOG2941 Beta-1,4-mannosyltrans 99.5 6.3E-12 1.4E-16 133.8 25.0 388 320-767 33-434 (444)
99 PF13524 Glyco_trans_1_2: Glyc 99.3 5.1E-12 1.1E-16 113.1 10.7 92 668-770 1-92 (92)
100 PF00982 Glyco_transf_20: Glyc 99.3 2.1E-10 4.5E-15 132.1 24.8 310 407-771 141-471 (474)
101 PRK10117 trehalose-6-phosphate 99.3 1E-09 2.2E-14 125.4 26.7 310 407-771 123-450 (474)
102 PF13439 Glyco_transf_4: Glyco 99.3 3.7E-11 8.1E-16 117.7 12.7 167 299-534 9-177 (177)
103 PF13579 Glyco_trans_4_4: Glyc 99.2 2.5E-11 5.3E-16 117.0 9.3 160 302-527 1-160 (160)
104 PRK12446 undecaprenyldiphospho 99.2 2.2E-08 4.8E-13 111.9 31.0 305 301-740 11-330 (352)
105 PLN02205 alpha,alpha-trehalose 99.2 6.9E-09 1.5E-13 127.1 29.0 311 409-771 203-548 (854)
106 COG0707 MurG UDP-N-acetylgluco 99.2 5.3E-08 1.1E-12 108.6 33.5 313 301-751 10-340 (357)
107 COG0380 OtsA Trehalose-6-phosp 99.1 1.6E-08 3.4E-13 115.3 27.2 321 396-771 137-476 (486)
108 TIGR02919 accessory Sec system 99.1 1.6E-08 3.5E-13 115.7 24.9 145 572-751 282-427 (438)
109 cd03784 GT1_Gtf_like This fami 99.0 1.5E-07 3.3E-12 106.3 28.1 123 570-729 238-370 (401)
110 PF09314 DUF1972: Domain of un 98.9 4.3E-08 9.2E-13 99.1 17.0 181 279-529 2-185 (185)
111 TIGR01426 MGT glycosyltransfer 98.9 1.8E-06 3.9E-11 97.7 31.3 111 639-771 273-389 (392)
112 PF08323 Glyco_transf_5: Starc 98.9 5.4E-09 1.2E-13 111.0 9.7 183 280-488 1-229 (245)
113 TIGR03492 conserved hypothetic 98.8 3.1E-06 6.7E-11 96.2 29.2 165 571-770 204-394 (396)
114 PF13528 Glyco_trans_1_3: Glyc 98.7 1.2E-06 2.7E-11 95.7 22.3 115 570-725 191-314 (318)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 3.8E-06 8.3E-11 94.4 25.3 266 406-771 92-364 (365)
116 COG1519 KdtA 3-deoxy-D-manno-o 98.6 3.9E-05 8.4E-10 85.6 30.3 264 407-752 123-403 (419)
117 PF13477 Glyco_trans_4_2: Glyc 98.6 7.5E-07 1.6E-11 85.2 14.7 123 318-482 15-139 (139)
118 TIGR00661 MJ1255 conserved hyp 98.4 3.2E-05 7E-10 85.3 23.4 69 640-718 228-302 (321)
119 PF13844 Glyco_transf_41: Glyc 98.4 1.2E-05 2.5E-10 92.1 17.6 186 559-774 274-466 (468)
120 PHA03392 egt ecdysteroid UDP-g 98.3 0.0012 2.5E-08 77.7 33.1 160 572-775 297-467 (507)
121 TIGR03590 PseG pseudaminic aci 98.2 0.00025 5.5E-09 76.8 22.1 97 572-697 171-268 (279)
122 PF02350 Epimerase_2: UDP-N-ac 98.1 0.00016 3.5E-09 80.8 20.4 251 407-742 67-325 (346)
123 COG1819 Glycosyl transferases, 98.0 0.00024 5.2E-09 81.2 18.4 158 570-772 236-399 (406)
124 PF04007 DUF354: Protein of un 98.0 0.0015 3.2E-08 72.6 23.3 60 660-727 244-306 (335)
125 PLN02448 UDP-glycosyltransfera 97.9 0.015 3.2E-07 67.7 31.4 139 571-748 274-429 (459)
126 PF02684 LpxB: Lipid-A-disacch 97.9 0.0023 5.1E-08 72.0 23.2 145 569-742 181-347 (373)
127 COG3914 Spy Predicted O-linked 97.8 0.00065 1.4E-08 78.1 17.0 182 562-773 422-612 (620)
128 KOG3742 Glycogen synthase [Car 97.8 0.00018 3.9E-09 79.7 11.3 108 653-770 492-608 (692)
129 COG4641 Uncharacterized protei 97.6 0.0035 7.6E-08 69.3 19.4 192 519-773 161-360 (373)
130 COG0763 LpxB Lipid A disacchar 97.6 0.0045 9.7E-08 68.8 20.0 201 404-696 82-290 (381)
131 PRK14986 glycogen phosphorylas 97.6 0.00098 2.1E-08 80.7 15.2 152 563-724 534-703 (815)
132 cd04300 GT1_Glycogen_Phosphory 97.4 0.0023 5.1E-08 77.5 15.5 151 563-723 521-689 (797)
133 PF12000 Glyco_trans_4_3: Gkyc 97.3 0.003 6.6E-08 63.4 12.1 110 396-533 56-170 (171)
134 COG0381 WecB UDP-N-acetylgluco 97.3 0.16 3.4E-06 57.0 26.5 277 405-775 90-371 (383)
135 COG0058 GlgP Glucan phosphoryl 97.3 0.012 2.5E-07 70.8 18.8 143 564-715 479-630 (750)
136 PRK01021 lpxB lipid-A-disaccha 97.2 0.085 1.8E-06 62.5 25.1 245 405-748 308-584 (608)
137 PRK10017 colanic acid biosynth 97.2 0.25 5.3E-06 57.0 28.1 98 630-742 296-399 (426)
138 PLN02208 glycosyltransferase f 97.2 0.52 1.1E-05 54.6 30.8 93 642-749 312-416 (442)
139 TIGR02093 P_ylase glycogen/sta 97.0 0.0054 1.2E-07 74.3 13.1 152 563-724 518-687 (794)
140 PRK14985 maltodextrin phosphor 97.0 0.0039 8.5E-08 75.3 11.4 149 564-723 521-688 (798)
141 PLN02554 UDP-glycosyltransfera 96.9 1.2 2.6E-05 52.3 30.7 88 641-741 342-447 (481)
142 PLN03007 UDP-glucosyltransfera 96.8 1.7 3.6E-05 51.1 34.4 78 640-729 344-438 (482)
143 PLN02863 UDP-glucoronosyl/UDP- 96.6 2.2 4.8E-05 50.0 33.9 119 641-777 343-474 (477)
144 PLN02562 UDP-glycosyltransfera 96.6 2.1 4.6E-05 49.7 31.4 88 640-741 327-419 (448)
145 PRK02797 4-alpha-L-fucosyltran 96.5 0.56 1.2E-05 51.3 22.3 169 572-774 145-316 (322)
146 PLN02173 UDP-glucosyl transfer 96.5 2.6 5.6E-05 49.0 33.6 80 640-729 316-406 (449)
147 PLN00414 glycosyltransferase f 96.4 3 6.5E-05 48.5 33.6 88 652-749 319-417 (446)
148 PLN02670 transferase, transfer 96.4 3.1 6.8E-05 48.7 32.9 110 643-772 341-463 (472)
149 PF11440 AGT: DNA alpha-glucos 96.2 0.91 2E-05 48.6 20.9 139 576-729 187-351 (355)
150 PF08288 PIGA: PIGA (GPI ancho 96.2 0.021 4.5E-07 50.6 7.4 72 360-442 14-87 (90)
151 PLN02410 UDP-glucoronosyl/UDP- 96.1 4.2 9.1E-05 47.4 32.5 93 641-748 324-422 (451)
152 PF07429 Glyco_transf_56: 4-al 96.0 0.91 2E-05 50.3 20.8 122 571-706 183-306 (360)
153 KOG1050 Trehalose-6-phosphate 95.7 0.9 1.9E-05 55.5 21.2 151 570-729 274-438 (732)
154 PRK14089 ipid-A-disaccharide s 95.7 0.3 6.5E-06 54.8 16.2 79 585-696 183-261 (347)
155 PF00343 Phosphorylase: Carboh 95.7 0.16 3.4E-06 61.3 14.5 149 564-722 436-602 (713)
156 COG4671 Predicted glycosyl tra 95.4 2.8 6E-05 46.6 21.5 134 570-729 218-363 (400)
157 PLN02210 UDP-glucosyl transfer 95.1 8.8 0.00019 44.8 35.2 70 652-729 331-413 (456)
158 COG1817 Uncharacterized protei 95.0 3.5 7.5E-05 45.1 20.5 57 666-729 253-312 (346)
159 COG3980 spsG Spore coat polysa 94.8 1.3 2.8E-05 47.7 16.3 138 572-747 159-305 (318)
160 COG3660 Predicted nucleoside-d 94.4 4.5 9.8E-05 43.3 19.0 112 569-700 159-276 (329)
161 PF06258 Mito_fiss_Elm1: Mitoc 94.4 4 8.7E-05 45.1 20.0 110 570-699 145-259 (311)
162 PLN02555 limonoid glucosyltran 94.1 16 0.00034 43.0 31.4 95 640-749 336-442 (480)
163 PF04101 Glyco_tran_28_C: Glyc 94.0 0.0025 5.5E-08 63.2 -5.6 91 641-746 55-155 (167)
164 PLN00164 glucosyltransferase; 93.6 19 0.00041 42.3 29.3 88 652-749 346-446 (480)
165 PLN02152 indole-3-acetate beta 93.3 21 0.00045 41.8 31.3 140 571-729 261-415 (455)
166 PF04464 Glyphos_transf: CDP-G 92.2 0.86 1.9E-05 51.2 10.7 131 564-729 186-334 (369)
167 PF00201 UDPGT: UDP-glucoronos 92.1 0.43 9.4E-06 55.8 8.4 168 571-781 276-450 (500)
168 PLN02992 coniferyl-alcohol glu 91.2 37 0.0008 40.0 32.6 78 642-729 339-425 (481)
169 PLN02764 glycosyltransferase f 90.4 42 0.0009 39.2 33.9 92 643-748 319-421 (453)
170 PF05159 Capsule_synth: Capsul 89.9 19 0.0004 38.7 17.8 103 569-695 114-224 (269)
171 PRK10916 ADP-heptose:LPS hepto 89.5 39 0.00084 37.6 23.7 99 573-695 182-286 (348)
172 cd03789 GT1_LPS_heptosyltransf 89.4 2.2 4.7E-05 45.9 10.1 99 574-696 124-224 (279)
173 COG2327 WcaK Polysaccharide py 88.9 47 0.001 37.8 27.7 99 628-741 253-357 (385)
174 PLN03004 UDP-glycosyltransfera 87.3 8.6 0.00019 44.8 13.7 85 641-741 334-430 (451)
175 KOG0853 Glycosyltransferase [C 84.3 4.3 9.3E-05 47.4 9.2 100 470-603 205-304 (495)
176 PLN03015 UDP-glucosyl transfer 83.8 98 0.0021 36.4 33.4 72 652-729 342-424 (470)
177 PF10933 DUF2827: Protein of u 83.1 14 0.00031 41.3 12.2 164 563-752 180-347 (364)
178 PRK10422 lipopolysaccharide co 83.1 11 0.00023 42.2 11.7 103 571-695 183-287 (352)
179 PF01075 Glyco_transf_9: Glyco 82.6 9.8 0.00021 39.9 10.6 103 570-695 104-208 (247)
180 PF10087 DUF2325: Uncharacteri 82.1 3.2 7E-05 37.5 5.8 84 606-704 2-90 (97)
181 TIGR03609 S_layer_CsaB polysac 81.9 70 0.0015 34.7 17.3 86 587-695 190-275 (298)
182 PLN02167 UDP-glycosyltransfera 80.2 46 0.001 39.1 16.0 79 641-729 340-432 (475)
183 KOG4626 O-linked N-acetylgluco 79.8 25 0.00055 41.9 13.0 194 561-785 750-949 (966)
184 TIGR02195 heptsyl_trn_II lipop 78.2 18 0.0004 39.9 11.3 100 571-695 173-276 (334)
185 PF08660 Alg14: Oligosaccharid 77.2 20 0.00043 36.1 10.2 63 406-487 91-159 (170)
186 TIGR02193 heptsyl_trn_I lipopo 75.5 28 0.0006 38.1 11.7 99 571-695 179-279 (319)
187 TIGR02201 heptsyl_trn_III lipo 75.2 24 0.00051 39.2 11.3 101 573-695 183-285 (344)
188 COG1703 ArgK Putative periplas 75.2 50 0.0011 36.4 12.9 111 303-441 63-177 (323)
189 COG0859 RfaF ADP-heptose:LPS h 74.5 22 0.00049 39.5 10.8 98 572-695 176-276 (334)
190 PF04413 Glycos_transf_N: 3-De 71.6 23 0.00049 36.1 9.1 69 407-488 95-163 (186)
191 PF11997 DUF3492: Domain of un 71.2 5.1 0.00011 43.3 4.5 81 406-486 171-257 (268)
192 PF01975 SurE: Survival protei 71.0 37 0.0008 35.0 10.6 38 279-342 1-38 (196)
193 PF03033 Glyco_transf_28: Glyc 70.6 4.2 9.2E-05 38.4 3.4 28 301-340 8-35 (139)
194 PRK05562 precorrin-2 dehydroge 70.0 1.4E+02 0.003 31.6 14.6 125 603-752 48-179 (223)
195 PF03401 TctC: Tripartite tric 69.8 1.3E+02 0.0028 32.6 15.0 151 572-747 78-244 (274)
196 PRK10964 ADP-heptose:LPS hepto 68.2 39 0.00085 37.1 10.9 96 574-695 181-278 (322)
197 PF06925 MGDG_synth: Monogalac 64.2 21 0.00045 35.5 7.0 61 405-488 87-151 (169)
198 PLN02207 UDP-glycosyltransfera 64.0 2.5E+02 0.0053 33.1 16.7 79 641-729 332-424 (468)
199 KOG1192 UDP-glucuronosyl and U 60.5 2.4E+02 0.0053 32.7 16.1 165 572-776 278-457 (496)
200 PF12038 DUF3524: Domain of un 60.5 40 0.00087 33.9 8.0 74 406-487 58-132 (168)
201 PF04230 PS_pyruv_trans: Polys 57.6 2.3E+02 0.005 29.1 15.7 39 652-696 245-283 (286)
202 PLN02534 UDP-glycosyltransfera 56.5 4E+02 0.0087 31.5 34.8 45 641-697 344-390 (491)
203 COG1618 Predicted nucleotide k 55.4 2.4E+02 0.0052 28.6 13.3 44 274-341 1-44 (179)
204 TIGR00715 precor6x_red precorr 54.3 37 0.00081 36.5 7.2 54 666-727 198-253 (256)
205 PRK02122 glucosamine-6-phospha 53.6 46 0.00099 40.7 8.6 43 275-340 366-408 (652)
206 KOG2452 Formyltetrahydrofolate 53.0 20 0.00044 40.9 5.0 45 279-354 1-45 (881)
207 COG1647 Esterase/lipase [Gener 52.6 55 0.0012 34.5 7.7 45 393-439 72-116 (243)
208 PF03016 Exostosin: Exostosin 52.5 32 0.0007 37.0 6.6 70 655-725 227-299 (302)
209 PRK13932 stationary phase surv 51.1 2.6E+02 0.0057 30.1 13.0 34 405-438 89-133 (257)
210 PRK00676 hemA glutamyl-tRNA re 48.4 3.9E+02 0.0084 30.1 14.2 127 602-752 173-307 (338)
211 PF15024 Glyco_transf_18: Glyc 47.3 1.9E+02 0.0042 34.5 12.0 155 571-776 276-457 (559)
212 COG2910 Putative NADH-flavin r 46.8 20 0.00044 36.7 3.4 33 279-340 1-33 (211)
213 PF10649 DUF2478: Protein of u 45.4 3.3E+02 0.0071 27.3 13.7 107 318-439 18-132 (159)
214 PF05686 Glyco_transf_90: Glyc 45.3 64 0.0014 37.0 7.8 82 686-776 234-319 (395)
215 TIGR00087 surE 5'/3'-nucleotid 44.4 3.7E+02 0.0081 28.7 12.8 34 405-438 84-128 (244)
216 COG4088 Predicted nucleotide k 44.2 1.3E+02 0.0028 31.7 8.7 51 388-438 56-108 (261)
217 TIGR01470 cysG_Nterm siroheme 43.5 3.9E+02 0.0085 27.6 14.2 135 591-752 22-164 (205)
218 smart00672 CAP10 Putative lipo 40.6 1.1E+02 0.0023 33.0 8.1 83 685-776 164-250 (256)
219 PRK03359 putative electron tra 37.0 1.4E+02 0.0031 32.1 8.4 34 407-440 112-149 (256)
220 PF06258 Mito_fiss_Elm1: Mitoc 36.5 5.4E+02 0.012 28.5 13.0 138 570-716 111-258 (311)
221 KOG2884 26S proteasome regulat 36.5 3.2E+02 0.007 28.7 10.2 115 572-727 108-225 (259)
222 PF09752 DUF2048: Uncharacteri 35.6 4.1E+02 0.0089 30.0 11.8 33 406-438 173-205 (348)
223 PF10649 DUF2478: Protein of u 35.0 69 0.0015 32.0 5.1 40 657-696 85-130 (159)
224 PRK13398 3-deoxy-7-phosphohept 33.7 5.6E+02 0.012 27.8 12.3 111 573-697 27-142 (266)
225 PF13407 Peripla_BP_4: Peripla 33.2 3.4E+02 0.0074 28.0 10.5 74 625-698 15-89 (257)
226 PLN00016 RNA-binding protein; 33.1 43 0.00094 37.7 3.9 20 318-341 71-90 (378)
227 PRK10840 transcriptional regul 32.8 5.3E+02 0.011 26.0 12.0 109 604-729 4-124 (216)
228 COG4195 Phage-related replicat 32.2 46 0.001 33.9 3.3 65 242-323 4-68 (208)
229 PRK12342 hypothetical protein; 32.0 1.6E+02 0.0034 31.7 7.7 34 407-440 109-146 (254)
230 PRK04020 rps2P 30S ribosomal p 31.1 3E+02 0.0065 28.7 9.2 113 582-717 47-161 (204)
231 COG2204 AtoC Response regulato 31.0 5.5E+02 0.012 30.2 12.3 107 605-730 6-121 (464)
232 PF03308 ArgK: ArgK protein; 30.7 2.6E+02 0.0056 30.4 8.9 110 303-440 41-154 (266)
233 PF05728 UPF0227: Uncharacteri 30.7 3.9E+02 0.0085 27.2 10.0 31 410-440 61-91 (187)
234 PRK13933 stationary phase surv 30.6 6.7E+02 0.014 27.0 12.1 34 405-438 85-129 (253)
235 PRK08057 cobalt-precorrin-6x r 30.2 2E+02 0.0043 30.8 8.1 34 666-699 191-225 (248)
236 COG0496 SurE Predicted acid ph 29.8 6E+02 0.013 27.4 11.4 34 406-439 82-126 (252)
237 COG0373 HemA Glutamyl-tRNA red 29.8 9.3E+02 0.02 27.9 16.7 104 627-752 212-321 (414)
238 TIGR00732 dprA DNA protecting 28.1 4.3E+02 0.0093 27.7 10.0 61 659-723 149-218 (220)
239 PRK06988 putative formyltransf 27.9 3.3E+02 0.0072 30.1 9.6 18 319-339 17-34 (312)
240 PF08672 APC2: Anaphase promot 27.4 24 0.00053 29.3 0.5 36 5-40 13-51 (60)
241 KOG1021 Acetylglucosaminyltran 26.1 4.7E+02 0.01 30.6 10.9 90 657-752 336-428 (464)
242 PRK13935 stationary phase surv 26.0 8.5E+02 0.019 26.2 12.9 34 405-438 84-128 (253)
243 KOG0832 Mitochondrial/chloropl 26.0 7.9E+02 0.017 26.2 11.0 46 666-717 174-220 (251)
244 PRK10360 DNA-binding transcrip 25.7 6.2E+02 0.013 24.5 11.0 64 666-729 48-116 (196)
245 TIGR03642 cas_csx13 CRISPR-ass 25.6 2.2E+02 0.0047 27.3 6.6 100 318-430 9-116 (124)
246 COG1797 CobB Cobyrinic acid a, 25.5 2.2E+02 0.0048 33.1 7.6 61 628-698 261-332 (451)
247 PRK04531 acetylglutamate kinas 25.2 1.8E+02 0.0039 33.4 7.1 56 570-642 35-91 (398)
248 PF03358 FMN_red: NADPH-depend 25.1 98 0.0021 29.7 4.3 38 279-338 1-38 (152)
249 COG1618 Predicted nucleotide k 24.4 1.7E+02 0.0038 29.5 5.8 72 657-729 93-175 (179)
250 COG1830 FbaB DhnA-type fructos 24.2 4.4E+02 0.0095 28.6 9.2 49 676-729 192-257 (265)
251 COG3181 Uncharacterized protei 24.2 6.8E+02 0.015 28.0 11.0 144 586-746 133-286 (319)
252 cd01020 TroA_b Metal binding p 24.2 3.1E+02 0.0067 29.4 8.3 89 659-752 47-136 (264)
253 PLN02657 3,8-divinyl protochlo 23.9 80 0.0017 36.0 4.0 51 261-340 43-93 (390)
254 TIGR01568 A_thal_3678 uncharac 23.6 1.2E+02 0.0026 25.9 3.8 50 222-272 7-58 (66)
255 PRK05331 putative phosphate ac 23.5 9.6E+02 0.021 26.9 12.3 52 581-647 9-61 (334)
256 PRK13934 stationary phase surv 23.4 9.8E+02 0.021 26.0 12.3 34 405-438 82-127 (266)
257 CHL00194 ycf39 Ycf39; Provisio 23.4 72 0.0016 34.9 3.4 33 279-340 1-33 (317)
258 COG2236 Predicted phosphoribos 22.8 1.9E+02 0.0041 29.9 6.0 48 386-434 9-56 (192)
259 cd03146 GAT1_Peptidase_E Type 22.3 5.3E+02 0.012 26.6 9.4 101 584-700 14-125 (212)
260 COG0482 TrmU Predicted tRNA(5- 22.3 2.1E+02 0.0045 32.4 6.6 106 301-440 11-126 (356)
261 COG0569 TrkA K+ transport syst 22.3 3.4E+02 0.0073 28.4 8.0 29 407-435 66-97 (225)
262 PRK11519 tyrosine kinase; Prov 21.8 1.6E+03 0.034 27.9 15.2 44 396-439 624-669 (719)
263 TIGR02990 ectoine_eutA ectoine 21.7 4E+02 0.0086 28.4 8.4 34 405-438 179-214 (239)
264 PF04392 ABC_sub_bind: ABC tra 21.6 5.1E+02 0.011 27.9 9.6 87 624-717 146-236 (294)
265 cd05312 NAD_bind_1_malic_enz N 21.6 7.1E+02 0.015 27.3 10.3 29 666-694 106-137 (279)
266 PF04844 Ovate: Transcriptiona 21.5 1.3E+02 0.0028 25.1 3.6 45 10-55 10-54 (59)
267 COG4567 Response regulator con 21.4 2.2E+02 0.0048 28.5 5.7 107 602-727 8-123 (182)
268 KOG0780 Signal recognition par 21.4 1.3E+03 0.028 26.7 17.3 176 575-774 157-342 (483)
269 COG1519 KdtA 3-deoxy-D-manno-o 21.0 6.3E+02 0.014 29.3 10.1 103 572-696 50-153 (419)
270 TIGR01012 Sa_S2_E_A ribosomal 20.9 2.7E+02 0.0059 28.8 6.7 115 581-717 40-155 (196)
271 PLN03228 methylthioalkylmalate 20.9 1.5E+03 0.032 27.1 14.0 109 133-258 18-143 (503)
272 PF04844 Ovate: Transcriptiona 20.8 1.3E+02 0.0028 25.0 3.5 48 223-272 2-51 (59)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=1.2e-200 Score=1750.61 Aligned_cols=811 Identities=82% Similarity=1.306 Sum_probs=786.4
Q ss_pred CCCCCCCCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceee
Q 003492 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAI 80 (816)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 80 (816)
|++++|+|++||+|+++++|++|||+|++||+||+++||++||+|||+++|+++++++.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 56689999999999999999999999999999999999999999999999999987777788899999999999999999
Q ss_pred ecCCeEEEEEcCCCceEEEEEEecCcceeeecChHHHhhhhhhhcccccCCCceeeeeccccccCCCCCCCCCCCCchhh
Q 003492 81 VLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQ 160 (816)
Q Consensus 81 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (816)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+|+||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhhhhhcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCcc
Q 003492 161 FLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240 (816)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (816)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHhhcCCCcchHhHhhcCCCCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHH
Q 003492 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 320 (816)
Q Consensus 241 g~g~~~~r~~~~~~~~~~~~~~p~~~~le~f~~~~p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa 320 (816)
||||||+||+|||++|+|+|++|||++||+||+||||+|||+|||+||+|+|.+++|+||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHH
Q 003492 321 LRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEI 400 (816)
Q Consensus 321 ~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i 400 (816)
++|+++||+|+|+|+|+||.++++.+++|+++.|.+.++++++|+|+||++.++++++|++|+++|||++.|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEe
Q 003492 401 TAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (816)
Q Consensus 401 ~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (816)
.+..+++||+||+|||++|++|.++++++|+|+|+|+|++++.|+..++.+|+..+..|+|++++++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 87777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccc
Q 003492 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (816)
Q Consensus 481 ~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (816)
+|.++++++++.++||++|.+|++|+||++++|++++++|++|||||+|.+.|.|+.....+.+.+++.+++++|++.+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888888999999999999999
Q ss_pred ccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003492 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (816)
Q Consensus 561 ~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (816)
++++|++.++++|+|+++||+++.||++.|++|++++.+.+++++|+|||++.++.++.+.++.++.++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 99999877888999999999999999999999999998878899999999985545666777778889999999999999
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHH
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~ 720 (816)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++||||||+|||||+.||+.|+|.+|.+|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHHHHHHHHHhh
Q 003492 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILK 800 (816)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y~~~~~~~~~~~~~~~~y~~~~~~~~ 800 (816)
+|++|.+++++|+.||+.|++|+++|++++.+ +|||+.++++++++..+||||++++|++|++++|||||||+||
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e-----~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ 796 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYE-----CYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLK 796 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhh
Confidence 99999999888999999999999999999988 9999999999999999999999999999999999999999999
Q ss_pred hcccccccccCccCCC
Q 003492 801 FRDLVKSVPLASENQH 816 (816)
Q Consensus 801 ~~~~~~~~~~~~~~~~ 816 (816)
||+||++||+++|+++
T Consensus 797 ~~~~~~~~~~~~~~~~ 812 (815)
T PLN00142 797 FRELAKTVPLAVDDPQ 812 (815)
T ss_pred hHHHhhcCCcccccCC
Confidence 9999999999999764
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=4.6e-193 Score=1687.04 Aligned_cols=783 Identities=75% Similarity=1.231 Sum_probs=759.2
Q ss_pred HHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeEEEEEcCCCceEEEEEEe
Q 003492 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVN 103 (816)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 103 (816)
|++|++||+||+++||++||+|||+++|+++|.++.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 68999999999999999999999999999999776667889999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHhhhhhhhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhhhcccCCCCCCchhHHHH
Q 003492 104 VYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDF 183 (816)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (816)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCccCCCCcHHHHHHHHHHHHHhhcCC
Q 003492 184 LRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 263 (816)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~r~~~~~~~~~~~~~~p 263 (816)
||.|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHhHhhcCCCCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCC
Q 003492 264 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 343 (816)
Q Consensus 264 ~~~~le~f~~~~p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~ 343 (816)
||++||+||+||||+|||+|||+||+|+|.+++|.||||||++||++||||||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCccceeecCCCceEEEEecCCCccc-ccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHH
Q 003492 344 AKGTTCNQRLERVSGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (816)
Q Consensus 344 ~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva 422 (816)
+.+++|+++.+.+.+++|++|+|+|+++..+ ++++|++|+++|||++.|+.++.+.+.+..+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 9999999999999999999999999999877 799999999999999999999999998777789999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhccccccccccccc
Q 003492 423 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502 (816)
Q Consensus 423 ~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~ 502 (816)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccC
Q 003492 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582 (816)
Q Consensus 503 ~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~ 582 (816)
|||++|++++|++++++|++|||||+|++.|+|++....+....++.+++++|++++.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888899999999999999999998888999999999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHH
Q 003492 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (816)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~l 662 (816)
+.||++.|++|++++++..++++|+|||++..+..+.|.++.++.++++++++++++.++|+|+|.+.+..+.+++++++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999877777899999999887677888888889999999999999999999999877777888999998
Q ss_pred HccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHH
Q 003492 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (816)
Q Consensus 663 a~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~m 742 (816)
++++|+||+||++|+||+|++||||||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999988888999999999
Q ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHHHHHHHHHhhhcccccccccC
Q 003492 743 SDGGLKRIYERIIICRYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLA 811 (816)
Q Consensus 743 s~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 811 (816)
+++|++++.+ +|||+.++++++++..+||||++++|++|++++|||||||+|+|||||++||++
T Consensus 721 s~~a~~rV~~-----~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 721 SQGGLQRIYE-----KYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHHHH-----hCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999998 999999999999999999999999999999999999999999999999999975
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=1.2e-170 Score=1392.33 Aligned_cols=550 Identities=76% Similarity=1.203 Sum_probs=475.6
Q ss_pred CCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeE
Q 003492 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFV 86 (816)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 86 (816)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++|+++.++.++.+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999998777778888999999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecChHHHhhhhhhhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhh
Q 003492 87 AIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHL 166 (816)
Q Consensus 87 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (816)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred hcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCccCCCCcH
Q 003492 167 SSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 246 (816)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 246 (816)
|||||+|++++++||+|||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcchHhHhhcCCCCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHC
Q 003492 247 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ 326 (816)
Q Consensus 247 ~r~~~~~~~~~~~~~~p~~~~le~f~~~~p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~ 326 (816)
+||+|||++|+++|+||||++||+|++|+||+++|+++||||||+|++|+|+||||||++||+|||||||++|..+++.+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCC
Q 003492 327 GLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 406 (816)
Q Consensus 327 GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~ 406 (816)
|.+|.|+|+|+||.+|++.+++|+++++++.|++|++|+|+||++.+|++++|+||+++|||+++|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHH
Q 003492 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (816)
Q Consensus 407 kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (816)
+||+||+||+++|++|+++++++|+|+|+|+|+++++|++.++++|+.++.+|||+|||+||.++|+.||+|||+|+|++
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccC
Q 003492 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 556 (816)
Q Consensus 487 ~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~ 556 (816)
+++++++|||++|.+||||+||++++||++|+|||+|||||+|.++|+|++++++|++.+|++|++++|+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999984
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=5.9e-57 Score=541.15 Aligned_cols=455 Identities=25% Similarity=0.455 Sum_probs=352.3
Q ss_pred cceEEEEccccCcccccc-CC-CCCcccchhhhHHHHHHHHHHHHHHHHHCC--CceeecceEEecccCCC-CCCccCcc
Q 003492 278 VFNVVILSPHGYFGQANV-LG-LPDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDA-KGTTCNQR 352 (816)
Q Consensus 278 ~~rIlivs~h~~~~~~~~-lG-~p~~GG~~vyvld~~raL~~eLa~~L~~~G--heV~~~i~VvT~~~p~~-~~~~~~~~ 352 (816)
.|.|++||.||.|+.+++ +| .+|||||.+||+ +||++|++.| |+|+ |+||.+.++ .+.+|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 589999999999988887 88 599999999999 6666678888 8999 999997643 34456655
Q ss_pred ceee------------cCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHH-------h----CCCce
Q 003492 353 LERV------------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-------L----QGFPD 409 (816)
Q Consensus 353 ~e~v------------~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~-------l----~~kPD 409 (816)
.|.+ ...+|++|+|+|+++.. +++++..+|||+..|...+...+.+. + ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5333 34569999999999863 36778999999999999998876541 1 12499
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCC----CChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 410 IIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~----~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
+||+|||+++.++.++++.+++|+|+|.|+++..|.. .+...+......|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999876643 222345556677888899999999999999999999999
Q ss_pred Hhhhcccccccccccccccccceee-----ecCCC---CCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCc
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRV-----VHGID---VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 557 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~-----~~Gi~---~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~ 557 (816)
++. ||..|..|. |.++++ ..|++ .+.+|+.|||||||++.|.|......+... ..++....+
T Consensus 393 ~~e------q~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IEE------QWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HHH------HHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 873 455444443 444333 33433 246799999999999999986432211000 000000000
Q ss_pred cc--cccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccC--CCeEEEEEeccCCCCCCcchHHHHHHHHHHHH
Q 003492 558 EQ--NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (816)
Q Consensus 558 ~~--~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~--p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~l 633 (816)
.. ..+....+.++++|+|+++||+.+.||++.|++|++++++.. +++. +|+|+++. ..........+...+.++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd-~d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDD-IDEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCch-hhhhhccchHHHHHHHHH
Confidence 00 000011122678899999999999999999999999987543 3444 46677653 111111122446778899
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccc----cEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003492 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (816)
Q Consensus 634 i~~~~L~~~V~flG~~~~~v~~~el~~~la~aa----DvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~ 709 (816)
++++++.++|.|+| .++.+++..+|+. | |+||+||++|+||++++||||||+|||||+.||+.|+|.++.+
T Consensus 541 i~~lgL~g~V~FlG----~v~~edvp~lYr~-Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~n 615 (1050)
T TIGR02468 541 IDKYDLYGQVAYPK----HHKQSDVPDIYRL-AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDN 615 (1050)
T ss_pred HHHhCCCCeEEecC----CCCHHHHHHHHHH-hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCc
Confidence 99999999999999 6677888888874 4 7999999999999999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 710 G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
|++++|.|++++|++|.+++ +|+++|++|+++|++++. +|+|+.++++|++.+...
T Consensus 616 GlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v~------~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 616 GLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNIH------LFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred EEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHHH------HCCHHHHHHHHHHHHHHH
Confidence 99999999999999996655 899999999999999986 599999999999988776
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1e-58 Score=517.42 Aligned_cols=490 Identities=42% Similarity=0.638 Sum_probs=432.4
Q ss_pred ecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCccCCCCcHHHHHHHHHHHHHhhcCCCcchHhHhhcC
Q 003492 195 MLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 274 (816)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~r~~~~~~~~~~~~~~p~~~~le~f~~~ 274 (816)
|+||++++...+|+.+.+|+..++.. .+||+..|.+.+++.++++|||.++.+|..++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999888
Q ss_pred CCCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccce
Q 003492 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (816)
Q Consensus 275 ~p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e 354 (816)
++. +||.|++||+++|+++++++|+.+|..+..+.+.++++.|.+++...|...+ +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 455 8999999999999999999999999999999999988889999999888765 3455
Q ss_pred eecCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003492 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (816)
Q Consensus 355 ~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v 434 (816)
...+..+++++++|+. +..+|+ +.+||++..|+ .+...+.+.+++ ||++|.++++.+..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 5666778999999994 455677 78899999988 455666776676 999999999999999999999999999
Q ss_pred EEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhccccccccccccccccc-ceeeecC
Q 003492 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHG 513 (816)
Q Consensus 435 ~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~-l~~~~~G 513 (816)
.+.|.++..++...+.+|+.+...|++.++|.++...++.+| ++++++++++...+.++|+++..+++|. +++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999998 9999999
Q ss_pred CCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHH
Q 003492 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (816)
Q Consensus 514 i~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (816)
++.|.++++++++|.|.+.+.|.- +.++..+. +
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~------~~~~~~i~-------------------~---------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAF------TLLHDSIP-------------------E---------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhH------HhhhcccC-------------------C----------------------
Confidence 999999999999999998887721 11111100 0
Q ss_pred HHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe-ccccCcCChHHHHHHHHccccEEEEC
Q 003492 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI-AAQTNRARNGELYRYIADTKGAFVQP 672 (816)
Q Consensus 594 ~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl-G~~~~~v~~~el~~~la~aaDvfV~P 672 (816)
...++.+++++|+. .++++++|+.++..+|+++++++++.+++.|. . .....+.|++++++..+|++|
T Consensus 305 -----~~~~~~hl~~~g~~--G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~----s~~~~~~yrl~adt~~v~~qP 373 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR--GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP----STTRVAKYRLAADTKGVLYQP 373 (495)
T ss_pred -----CCCCceEEEEecCC--CccccchhhHHHHHHHHHHHHHhCccCceEEEec----CCchHHHHHHHHhcceEEecC
Confidence 11245666666632 14578999999999999999999996555554 5 334456699999988899999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH---HHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 003492 673 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD---QAAELMADFFGKCKENPSHWKKISDGGLKR 749 (816)
Q Consensus 673 S~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~---~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~ 749 (816)
+. |.||+|.+|||+||+|||||+.||+.|+|.++.+|++++| +.+ .+|++| .+|..||++|.+|+++|+++
T Consensus 374 a~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~r 447 (495)
T KOG0853|consen 374 AN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKR 447 (495)
T ss_pred CC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHH
Confidence 99 9999999999999999999999999999999999999999 555 355555 66779999999999999999
Q ss_pred HHhhcccCCCCHHHHHHHHHHHHHHhhhhHHhcHHHHHHHHHHHHHHHHhhhc
Q 003492 750 IYERIIICRYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 802 (816)
Q Consensus 750 ~~~~~~~~~ytw~~~a~~ll~ly~~y~~~~~~~~~~~~~~~~y~~~~~~~~~~ 802 (816)
+++ .|+|+.+.+++.++...|.+|+.++..++...+||++|||+|.||
T Consensus 448 V~e-----~fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 448 VKE-----MFSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HHH-----HHhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 999 999999999999999999999999999999999999999999986
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1.5e-50 Score=462.33 Aligned_cols=424 Identities=29% Similarity=0.557 Sum_probs=315.1
Q ss_pred ceEEEEccccCccccc-cCCC-CCcccchhhhHHHHHHHHHHHHHHHHHCCC--ceeecceEEecccCCCC-CCccCccc
Q 003492 279 FNVVILSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKRQGL--DISPKILIVTRLIPDAK-GTTCNQRL 353 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~-~lG~-p~~GG~~vyvld~~raL~~eLa~~L~~~Gh--eV~~~i~VvT~~~p~~~-~~~~~~~~ 353 (816)
+||+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+.+++.. ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999998 6774 99999999999 77778899997 999 9998765431 12233233
Q ss_pred eeecCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003492 354 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (816)
Q Consensus 354 e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~ 433 (816)
+.. .+|++++|+|+.+. .|.++...++++..+...+.+.+.+. ..+|||||+|++.+++++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 34799999998653 23445667888887776666655432 34799999999888899999999999999
Q ss_pred EEEecCCCcccCC---CChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceee
Q 003492 434 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 510 (816)
Q Consensus 434 v~t~H~l~~~k~~---~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~ 510 (816)
|+|.|+....+.. .....+..+...|.+......+..+++.+|.||++|.+++.. . +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432211 011112222233444444445778899999999999765431 1 111
Q ss_pred ecCCCCCCCcEEEecCCCcCCCCCCCchHHHH--HhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHH
Q 003492 511 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR--LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMT 588 (816)
Q Consensus 511 ~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~r--l~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~ 588 (816)
..|++ ..|+.+||||+|++.|.|....... .... . ..++. ++++++|+++||+.+.||++
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~---~-----------~~~~~--~~~~~~i~~vGrl~~~Kg~~ 264 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSEIDNL---L-----------APFLK--DPEKPPILAISRPDRRKNIP 264 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchhHHHH---H-----------Hhhcc--ccCCcEEEEEcCCcccCCHH
Confidence 11333 6799999999999998775321110 0000 0 11222 45678999999999999999
Q ss_pred HHHHHHHHhhccCCCeEEE-EEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcc--
Q 003492 589 GLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT-- 665 (816)
Q Consensus 589 ~LieA~~~l~~~~p~v~Lv-IVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a-- 665 (816)
.|++|++++.+..+..+++ |+|+|++ ......+..++.+++..+++++++.++|+|+| .++.+++..+++.+
T Consensus 265 ~li~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~ 339 (439)
T TIGR02472 265 SLVEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAAR 339 (439)
T ss_pred HHHHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhh
Confidence 9999998754332334554 5576654 11112222334556778899999999999999 66778888888742
Q ss_pred -ccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 003492 666 -KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISD 744 (816)
Q Consensus 666 -aDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~ 744 (816)
+|+||+||.+|+||++++||||||+|||+|+.||+.|++.++.+|++++|+|++++|++|.+++ +||+.+++|++
T Consensus 340 ~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~ 415 (439)
T TIGR02472 340 SRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSR 415 (439)
T ss_pred cCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHH
Confidence 2999999999999999999999999999999999999999999999999999999999997665 89999999999
Q ss_pred HHHHHHHhhcccCCCCHHHHHHHHHHHH
Q 003492 745 GGLKRIYERIIICRYTWKIYSERLMTLA 772 (816)
Q Consensus 745 ~ar~~~~~~~~~~~ytw~~~a~~ll~ly 772 (816)
+|++++.+ +|||+.++++|+++.
T Consensus 416 ~a~~~~~~-----~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 416 NGIEGVRR-----HYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHH-----hCCHHHHHHHHHHHh
Confidence 99999998 999999999999874
No 7
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.2e-45 Score=435.43 Aligned_cols=514 Identities=16% Similarity=0.189 Sum_probs=365.7
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCCCC--------chhHHHHhhccCCccCCCCcHHHHHHHH---------HHHHHhhcCC
Q 003492 201 QSISRLQSSLSKAEDHLSKLPPDTP--------FSQFEYVLQGMGFEKGWGDTAEHVLEMM---------HLLLDILQAP 263 (816)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~g~~~~r~~~~~---------~~~~~~~~~p 263 (816)
++++.+|+.|.+..+.-++...+.| |+++..++++|=+++-.+.+-+..+..| ....++.+.+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~ 462 (977)
T PLN02939 383 ESIKEFQDTLSKLKEESKKRSLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKN 462 (977)
T ss_pred HHHHHHHHHHHHHHhhhhcccccCchhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCc
Confidence 4678899999999999888888887 9999999999999999999999998888 4778889999
Q ss_pred CcchHhHhhcCC--C--CcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEec
Q 003492 264 DPSTLEKFLGRL--P--MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTR 339 (816)
Q Consensus 264 ~~~~le~f~~~~--p--~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~ 339 (816)
|...+..|+.-. | +.|||++||.-..|. ..+||..-++- .|.++|+++||+|. |+++
T Consensus 463 ~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~----VIlP 523 (977)
T PLN02939 463 EREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE----IVLP 523 (977)
T ss_pred hHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEeC
Confidence 999999888632 2 459999999887653 56999999999 67777899999999 9998
Q ss_pred ccCCCCCCccC-cc-----ce-eecC-----------CCceEEEEecCCCcccccccccccccchhh------HHHHHHH
Q 003492 340 LIPDAKGTTCN-QR-----LE-RVSG-----------TEHTHILRVPFRSEKGILRQWISRFDVWPY------LETFTED 395 (816)
Q Consensus 340 ~~p~~~~~~~~-~~-----~e-~v~g-----------~~~v~I~rvp~~~~~~~~~~~isr~~i~~y------l~~f~~~ 395 (816)
.++.-...... .. .. .+.+ .+|+.++.+...... .+..|..++.+ +..|...
T Consensus 524 ~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~RF~~FsrA 599 (977)
T PLN02939 524 KYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFKRFSYFSRA 599 (977)
T ss_pred CCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHHHHHHHHHH
Confidence 87533210000 00 00 0000 123444444211000 01112223311 1223333
Q ss_pred HHHHHHHHhCCCceEEEEcCCCchHHHHHHHHH------cCCcEEEEecCCCcccCCC-Chh-----hhhhhh--h--hh
Q 003492 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYK------MGITQCTIAHALEKTKYPD-SDI-----YWKKFD--E--KY 459 (816)
Q Consensus 396 ~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~------~gip~v~t~H~l~~~k~~~-~~~-----~~~~~~--~--~y 459 (816)
++. +....+.+|||||+|.|.+++++.++.+. .++|.|+|+|++....... ..+ .+..+. . ..
T Consensus 600 aLe-~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~ 678 (977)
T PLN02939 600 ALE-LLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQD 678 (977)
T ss_pred HHH-HHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhh
Confidence 443 33334679999999999999886655542 3578999999986544221 111 111110 0 00
Q ss_pred hchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchH
Q 003492 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (816)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~ 539 (816)
++..++..-+.++..||.|+|+|+..+...... +. ..+.+. +.....|+.+|+||||.+.|.|..+.
T Consensus 679 ~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~G----~GL~~~------L~~~~~Kl~gIlNGID~e~wnPatD~ 745 (977)
T PLN02939 679 NAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---GG----RGLQDT------LKFHSKKFVGILNGIDTDTWNPSTDR 745 (977)
T ss_pred ccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---hc----cchHHH------hccccCCceEEecceehhhcCCcccc
Confidence 122233334456778999999999887643321 10 011111 12226799999999999999987532
Q ss_pred HHHHhhhhccchhhccCccccccccCCCCC-CCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCC
Q 003492 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSD-RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKS 618 (816)
Q Consensus 540 ~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~-~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~ 618 (816)
.-...--...++.+..++...++++|+..+ ++.|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+.
T Consensus 746 ~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~---- 819 (977)
T PLN02939 746 FLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPV---- 819 (977)
T ss_pred ccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCc----
Confidence 100000001123333444555677888532 467999999999999999999999998865 4789999999975
Q ss_pred cchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003492 619 KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 698 (816)
Q Consensus 619 ~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~g 698 (816)
..+.+.++.+++++++.++|.|+| ..+......+++ ++|+||+||++|+||++++|||+||+|+|++++|
T Consensus 820 -----~~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vG 889 (977)
T PLN02939 820 -----PHIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTG 889 (977)
T ss_pred -----HHHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCCEEEecCC
Confidence 134567888999999999999999 555566677888 5999999999999999999999999999999999
Q ss_pred cccccccc---------CCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHH
Q 003492 699 GPAEIIEH---------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLM 769 (816)
Q Consensus 699 G~~EiI~d---------g~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll 769 (816)
|+.|+|.+ +.+||+++++|+++++++|.+++..+..||+.|++|+++++. + +|||+.++++|+
T Consensus 890 GL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~---~-----dFSWe~~A~qYe 961 (977)
T PLN02939 890 GLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN---I-----DFSWDSSASQYE 961 (977)
T ss_pred CCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH---h-----cCCHHHHHHHHH
Confidence 99999975 579999999999999999998876666799999999987653 4 799999999999
Q ss_pred HHHHHh
Q 003492 770 TLAGVY 775 (816)
Q Consensus 770 ~ly~~y 775 (816)
++|+..
T Consensus 962 eLY~~l 967 (977)
T PLN02939 962 ELYQRA 967 (977)
T ss_pred HHHHHH
Confidence 998754
No 8
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.5e-43 Score=407.76 Aligned_cols=426 Identities=18% Similarity=0.214 Sum_probs=288.9
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccC-ccceee-
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRLERV- 356 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~-~~~e~v- 356 (816)
|||++||.+.+|. ..+||+..++. .|+++|+++||+|. |+|+.++........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998853 34899999999 77777899999999 999886543211000 000110
Q ss_pred --------cCCCceEEEEecCCCcccccccccccccchhhH---HH---HHHHHHHHHHHHhCCCceEEEEcCCCchHHH
Q 003492 357 --------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ET---FTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (816)
Q Consensus 357 --------~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl---~~---f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva 422 (816)
...+|+++++++.... ..+..++.+. .+ |...++.. ...+..+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~-~~~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEF-AEGLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHH-HHhcCCCCceEEECCcHHHHHH
Confidence 1124677787765321 1122233221 22 33333333 3344679999999999999999
Q ss_pred HHHHHHc-----CCcEEEEecCCCcccCCCC-h-----hhhhhh-hhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhc
Q 003492 423 SLLAYKM-----GITQCTIAHALEKTKYPDS-D-----IYWKKF-DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490 (816)
Q Consensus 423 ~lla~~~-----gip~v~t~H~l~~~k~~~~-~-----~~~~~~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k 490 (816)
.++++.. ++|+|+|+|++........ . +.+..+ .....+...+...+.+++.||.|||+|+...+...
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888663 7999999999864321110 0 000000 00111112233455688999999999988765332
Q ss_pred ccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhh-ccchhhccCccccccccCCCCC
Q 003492 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLFDPEQNDEHVGTLSD 569 (816)
Q Consensus 491 ~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~-~~i~~~l~~~~~~~~~lg~l~~ 569 (816)
+.. + .+.+.+.+ +. ...|+.+||||||.+.|.|........ .+. ..++.+..++...++.+|+. +
T Consensus 214 ~~~--~----~~gl~~~~----~~--~~~ki~vI~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl~-~ 279 (466)
T PRK00654 214 TPE--F----GYGLEGLL----RA--RSGKLSGILNGIDYDIWNPETDPLLAA-NYSADDLEGKAENKRALQERFGLP-D 279 (466)
T ss_pred ccc--C----CcChHHHH----Hh--cccCceEecCCCCccccCCccCccccc-ccChhhhhchHHHHHHHHHHhCCC-C
Confidence 210 0 00000000 11 256899999999999998854311000 000 00001111112233457773 3
Q ss_pred CCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-ecc
Q 003492 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAA 648 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f-lG~ 648 (816)
++.++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. .+.+.+++++++++ +++.+ .|
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g- 344 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIG- 344 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEe-
Confidence 4678999999999999999999999998763 799999999864 34567888888886 45665 44
Q ss_pred ccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------CeEEEECCCCHHHHH
Q 003492 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQAA 722 (816)
Q Consensus 649 ~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg------~~G~li~p~d~~~lA 722 (816)
.+.+.+..+++ +||+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++++|+++++
T Consensus 345 ----~~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la 419 (466)
T PRK00654 345 ----YDEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLL 419 (466)
T ss_pred ----CCHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHH
Confidence 23344556777 5999999999999999999999999999999999999999988 899999999999999
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
++|.+++. +..|++.|.+|++++++ + +|||+.++++|+++|+.
T Consensus 420 ~~i~~~l~-~~~~~~~~~~~~~~~~~---~-----~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 420 RALRRALE-LYRQPPLWRALQRQAMA---Q-----DFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHHH-HhcCHHHHHHHHHHHhc---c-----CCChHHHHHHHHHHHHH
Confidence 99988763 33578889999888863 5 79999999999999874
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1.5e-42 Score=390.53 Aligned_cols=399 Identities=22% Similarity=0.326 Sum_probs=295.8
Q ss_pred EEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCC
Q 003492 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360 (816)
Q Consensus 281 Ilivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~ 360 (816)
|++++.|+.|.. +.+..+.||.++|+. +|+++|+++||+|+ |+|+..+...+. . ....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~---~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP----V---VEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC----c---cccCC
Confidence 578888887542 345556799999999 78888899999999 998764322111 1 11123
Q ss_pred ceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003492 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (816)
Q Consensus 361 ~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l 440 (816)
++++.+++..+..+. ....+..++..|.....+.+......+||+||+|++.+++.+.++++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEGL-----DKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCcccC-----CHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 688888876543221 111122222334333443443333568999999998888888888988999999999986
Q ss_pred CcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCc
Q 003492 441 EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPK 520 (816)
Q Consensus 441 ~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~k 520 (816)
...+. .++........ ......+...++.+|.++++|+...+...+. .|.+ ..|
T Consensus 135 ~~~~~----~~~~~~~~~~~-~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDTPEP-EARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCCCch-HHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 43210 01000000000 0111234567889999999998765532111 1222 568
Q ss_pred EEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhcc
Q 003492 521 FNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600 (816)
Q Consensus 521 i~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~ 600 (816)
+.+||||+|.+.|.|......+ .++++ ++++++|+++||+.+.||++.+++|+.++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATER-------------------ARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHHH-------------------HhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 9999999999888765322211 22554 45678999999999999999999999999877
Q ss_pred CCC--eEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCC
Q 003492 601 REL--VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (816)
Q Consensus 601 ~p~--v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgF 678 (816)
.|+ ++|+|+|++... ...+.+.++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 776 999999974320 0123567888999999999999999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCC
Q 003492 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICR 758 (816)
Q Consensus 679 GltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ 758 (816)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.++ +
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~~------~ 385 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHAA------G 385 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHH------h
Confidence 999999999999999999999999999999999999999999999997765 799999999999999875 6
Q ss_pred CCHHHHHHHHHHHHHH
Q 003492 759 YTWKIYSERLMTLAGV 774 (816)
Q Consensus 759 ytw~~~a~~ll~ly~~ 774 (816)
|||+.++++++++|..
T Consensus 386 fsw~~~~~~~~~~y~~ 401 (405)
T TIGR03449 386 FSWAATADGLLSSYRD 401 (405)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999864
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=6.6e-42 Score=394.72 Aligned_cols=433 Identities=18% Similarity=0.199 Sum_probs=294.1
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCc-----cc
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ-----RL 353 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~-----~~ 353 (816)
|||++||...+|- -.+||+..++. .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999997752 34899999999 67777899999999 9998765432110000 00
Q ss_pred --------ee----ecCCCceEEEEecCCCcccccccc--cc---cccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCC
Q 003492 354 --------ER----VSGTEHTHILRVPFRSEKGILRQW--IS---RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS 416 (816)
Q Consensus 354 --------e~----v~g~~~v~I~rvp~~~~~~~~~~~--is---r~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~ 416 (816)
.. ....+++.++++..... ..+. +- ..+.......|...+...+.. .+.+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~---~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw 137 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSL---FDRPGGIYGDDYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDW 137 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHH---cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCc
Confidence 00 01123566666653321 0000 00 001111122344444444433 4679999999999
Q ss_pred CchHHHHHHHHHcC---CcEEEEecCCCcccCCCC-hhhh-----hhhh-hhhhchhhhhHHHHHHhhCCEEEecCHHHH
Q 003492 417 DGNLVASLLAYKMG---ITQCTIAHALEKTKYPDS-DIYW-----KKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (816)
Q Consensus 417 ~~~lva~lla~~~g---ip~v~t~H~l~~~k~~~~-~~~~-----~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (816)
.+++++.++++..+ +|.|+|+|++........ ...+ ..+. ..+.+...+...+.+++.||.|+|+|+..+
T Consensus 138 ~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~ 217 (473)
T TIGR02095 138 HTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYA 217 (473)
T ss_pred HHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHH
Confidence 99999999988876 999999999764322111 1111 0000 111111133445678999999999998876
Q ss_pred hhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhh-hccchhhccCccccccccC
Q 003492 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTAL-HGSIEQLLFDPEQNDEHVG 565 (816)
Q Consensus 487 ~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~-~~~i~~~l~~~~~~~~~lg 565 (816)
+...... + ...+.+.+ .....++.+|+||+|.+.|.|..+..... .+ ....+.+..++...++++|
T Consensus 218 ~ei~~~~--~----~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~g 284 (473)
T TIGR02095 218 REILTPE--F----GYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKA-NYSADDLAGKAENKEALQEELG 284 (473)
T ss_pred HHhcCCc--C----CccchhHH------HhcCCCeEEEeCCCCccccCCCCCccccc-CcCccchhhhhhhHHHHHHHcC
Confidence 5332210 0 00011000 01246899999999999998854311000 00 0000001111122335578
Q ss_pred CCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003492 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (816)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (816)
+..++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. ...+++++++.+++ +++.+
T Consensus 285 l~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~v~~ 350 (473)
T TIGR02095 285 LPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GNVRV 350 (473)
T ss_pred CCccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--CcEEE
Confidence 75445789999999999999999999999999763 599999999853 23567777887764 57888
Q ss_pred eccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------CeEEEECCCCHH
Q 003492 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPD 719 (816)
Q Consensus 646 lG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg------~~G~li~p~d~~ 719 (816)
.+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|++++++|++
T Consensus 351 ~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~ 425 (473)
T TIGR02095 351 II----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPG 425 (473)
T ss_pred EE----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHH
Confidence 87 556677778888 5999999999999999999999999999999999999999998 899999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
+++++|.+++....+|++.|++|++++++ + +|||+.++++|+++|+.
T Consensus 426 ~la~~i~~~l~~~~~~~~~~~~~~~~~~~---~-----~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 426 ALLAALSRALRLYRQDPSLWEALQKNAMS---Q-----DFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhc---c-----CCCcHHHHHHHHHHHHh
Confidence 99999988775444499999999998863 4 79999999999999974
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=7.2e-41 Score=372.79 Aligned_cols=397 Identities=33% Similarity=0.554 Sum_probs=301.2
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+|++.|+.|. ..-|.|+.||.++++. +|++.|+++||+|+ |+|...+...... ....
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~~-------~~~~ 59 (398)
T cd03800 1 RIALISLHGSPL--AQPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPPI-------VELA 59 (398)
T ss_pred CeEEEecccccc--ccCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCCc-------cccc
Confidence 688999887653 2246689999999999 77777899999999 9986543321110 1122
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 439 (816)
.++.+.+++..+.. ..++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36788888765432 1223345666666666666655443 23899999999888888889999999999999998
Q ss_pred CCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCC
Q 003492 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (816)
Q Consensus 440 l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ 519 (816)
+...........+. +........+...++.+|.++++|.......... | +. ...
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---~----------------~~--~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL---Y----------------GA--YPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH---c----------------cc--ccc
Confidence 76543222111111 1112223346678899999999998775532211 0 11 144
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhc
Q 003492 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (816)
Q Consensus 520 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (816)
++.+||||+|.+.|.+........ ..++. ..++++|+|+||+.+.||++.+++++.++.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEARR------------------ARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhHH------------------Hhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 689999999998887654322111 11222 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCc
Q 003492 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (816)
Q Consensus 600 ~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFG 679 (816)
..++++|+++|++..... ..+...++++++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDIL------AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcch------hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 788999999999876211 122345778888999999999999 7788999999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 003492 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRY 759 (816)
Q Consensus 680 ltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~y 759 (816)
++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+.+ +|
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~-----~~ 387 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARA-----RY 387 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH-----hC
Confidence 99999999999999999999999999999999999999999999997655 8999999999999999988 89
Q ss_pred CHHHHHHHHH
Q 003492 760 TWKIYSERLM 769 (816)
Q Consensus 760 tw~~~a~~ll 769 (816)
||+.++++++
T Consensus 388 s~~~~~~~~~ 397 (398)
T cd03800 388 TWERVAARLL 397 (398)
T ss_pred CHHHHHHHHh
Confidence 9999999986
No 12
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.8e-40 Score=400.35 Aligned_cols=406 Identities=15% Similarity=0.090 Sum_probs=281.5
Q ss_pred cceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCcc-Cccc-ee
Q 003492 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRL-ER 355 (816)
Q Consensus 278 ~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~-~~~~-e~ 355 (816)
+|||++||.+..|- ..+||...+|. .|+++|+++||+|. |+|+.++.-..... .... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 49999999998753 35899999999 77777899999999 99998753210000 0000 00
Q ss_pred e-----------cCCCceEEEEecCCCcccccccccccccchh------hHHHHHHHHHHHHHHHhCCCceEEEEcCCCc
Q 003492 356 V-----------SGTEHTHILRVPFRSEKGILRQWISRFDVWP------YLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (816)
Q Consensus 356 v-----------~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~------yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~ 418 (816)
+ ...+++.++.+.... + +..+..++. .+..|...++..+ .....+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l-~~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFL-LQSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHH-HhcCCCCCEEEECCChH
Confidence 0 011245555554221 1 111111221 2223444444433 33466899999999999
Q ss_pred hHHHHHHHHH------cCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhccc
Q 003492 419 NLVASLLAYK------MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 492 (816)
Q Consensus 419 ~lva~lla~~------~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 492 (816)
++++.+++.. .++|+|+|+|++.... ++ ...++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 9998888775 3589999999864211 00 1246789999999999876532210
Q ss_pred ccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHh-hhhccchhhccCccccccccCCCCCCC
Q 003492 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT-ALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (816)
Q Consensus 493 ~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~-~~~~~i~~~l~~~~~~~~~lg~l~~~~ 571 (816)
.++.....|+.+|+||||.+.|.|.++...... ......+.+...+...++.+|+. +++
T Consensus 780 -------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 780 -------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred -------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 012212468999999999999988643210000 00000000111112234557874 246
Q ss_pred CcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEeccc
Q 003492 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIAAQ 649 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L--~~~V~flG~~ 649 (816)
.|+|+++|||.+.||++.|++|+.++.+ ++++|+|+|+|++ ..+.+.++++++++++ +++|.|.|
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd---------~~~e~~l~~La~~Lg~~~~~rV~f~g-- 906 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPD---------PRIQNDFVNLANQLHSSHHDRARLCL-- 906 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCC---------HHHHHHHHHHHHHhCccCCCeEEEEe--
Confidence 8999999999999999999999999865 4799999999975 1235778889998866 57899988
Q ss_pred cCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------CeEEEECCC
Q 003492 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------ASGFHIDPY 716 (816)
Q Consensus 650 ~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg-------------~~G~li~p~ 716 (816)
..+......+++ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.|+ .+||++++.
T Consensus 907 --~~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 907 --TYDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred --cCCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 333332346777 5999999999999999999999999999999999999999884 699999999
Q ss_pred CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 717 d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
|+++++.+|.+++... ++....+++.+++.+.+ .|||+.++++|+++|+.
T Consensus 984 d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~-----dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 984 DAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQ-----DWSWNRPALDYMELYHS 1033 (1036)
T ss_pred CHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHH
Confidence 9999999998877322 34445577777878777 89999999999999964
No 13
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=8.8e-41 Score=386.04 Aligned_cols=438 Identities=17% Similarity=0.194 Sum_probs=294.6
Q ss_pred CCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCc--cCc--
Q 003492 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--CNQ-- 351 (816)
Q Consensus 276 p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~--~~~-- 351 (816)
|| |||++||....|- ..|||..-++- .|.++|+++||+|. |+++.++.-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 9999999887753 57999999888 66777899999999 9988765432110 000
Q ss_pred cceee--cCCCceEEEEec--CCCccc---c-c--ccccccccch----------hhHH---HHHHHHHHHHHHHhCCCc
Q 003492 352 RLERV--SGTEHTHILRVP--FRSEKG---I-L--RQWISRFDVW----------PYLE---TFTEDVGSEITAELQGFP 408 (816)
Q Consensus 352 ~~e~v--~g~~~v~I~rvp--~~~~~~---~-~--~~~isr~~i~----------~yl~---~f~~~~~~~i~~~l~~kP 408 (816)
....+ .-.....+.++- ..+..+ + + ..+..|..++ .-.+ .|...+++.+ ..+..+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~-~~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETL-QRLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 01111 000011222110 000000 0 0 0111122222 1122 2333344333 3345689
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCCcccCCCChhh-----hhhhhhhhhchhhhhHHHHHHhhCC
Q 003492 409 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDSDIY-----WKKFDEKYHFSCQFTADLIAMNNAD 476 (816)
Q Consensus 409 DIIh~h~~~~~lva~lla~~~-------gip~v~t~H~l~~~k~~~~~~~-----~~~~~~~y~f~~~~~~e~~a~~~AD 476 (816)
||||+|+|.+++++.+++++. ++|+|+|+|++........... +........+...++..+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999999888764 7999999999764332111110 0100000111123445667899999
Q ss_pred EEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhh-ccchhhcc
Q 003492 477 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLF 555 (816)
Q Consensus 477 ~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~-~~i~~~l~ 555 (816)
.|+|+|+..++...+. +. ..+.+++.++ ....|+.+|+||||.+.|.|.++...+ ..+. ..++.+..
T Consensus 223 ~VitVS~~~a~ei~~~-~~----~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~-~~~~~~~~~~k~~ 290 (489)
T PRK14098 223 LLTTTSPRYAEEIAGD-GE----EAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIK-KRYSIERLDGKLE 290 (489)
T ss_pred cceeeCHHHHHHhCcC-CC----CCcChHHHHH------hcCCCeeEEeCCccccccCCccccccc-ccCCcchhhhHHH
Confidence 9999999887643321 00 0112222111 015689999999999999986532100 0000 00111111
Q ss_pred CccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHH
Q 003492 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (816)
Q Consensus 556 ~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (816)
++....+.+|+..+++.++|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+.+.++++++
T Consensus 291 ~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~ 358 (489)
T PRK14098 291 NKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAE 358 (489)
T ss_pred HHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHH
Confidence 22233455788666788999999999999999999999999875 4799999999864 34578888888
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CCeEE
Q 003492 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GASGF 711 (816)
Q Consensus 636 ~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d----g~~G~ 711 (816)
+++ ++|.|+| .++.+++..+++ ++|+||+||.+|+||++.+|||+||+|+|++++||+.|.+.+ +.+|+
T Consensus 359 ~~~--~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~ 431 (489)
T PRK14098 359 EHP--EQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGF 431 (489)
T ss_pred HCC--CCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCcee
Confidence 874 7899999 667778888998 599999999999999999999999999999999999998864 77999
Q ss_pred EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 712 li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
+++++|+++++++|.++++ +..|++.|+++++++. .+ +|||+.++++|+++|+.
T Consensus 432 l~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~-----~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 432 IFHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ER-----DFSWKNSAEEYAQLYRE 485 (489)
T ss_pred EeCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cC-----CCChHHHHHHHHHHHHH
Confidence 9999999999999988753 5578999999987764 35 79999999999999974
No 14
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=3.8e-40 Score=372.77 Aligned_cols=396 Identities=13% Similarity=0.135 Sum_probs=284.2
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEeccc--CCCC-CCccCcccee
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI--PDAK-GTTCNQRLER 355 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~--p~~~-~~~~~~~~e~ 355 (816)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+.. |... ...+......
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998766 56789999999 77778899999999 999652 2111 0000100111
Q ss_pred ecCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc--hHHHHHHHHHcCCcE
Q 003492 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQ 433 (816)
Q Consensus 356 v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~--~lva~lla~~~gip~ 433 (816)
....++++++|+|...... ...+. .+.. ...|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123478999988653210 00000 1111 112333333333333346899999998654 456778888899999
Q ss_pred EEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecC
Q 003492 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (816)
Q Consensus 434 v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~G 513 (816)
++++|+.+......... ++ ......+. ...+..+++.||.||++|+...+..++ .|
T Consensus 135 v~~~~d~~~~~~~~~~~-~~-~~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGL-LK-GGKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCC-cc-CcHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 99999764311000000 00 00000011 123667889999999999987663221 13
Q ss_pred CCCCCCcEEEecCCCcCCCCCCCchHH-HHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHH
Q 003492 514 IDVFDPKFNIVSPGADMDIYFPYSEKQ-KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 592 (816)
Q Consensus 514 i~~f~~ki~VIpnGVD~~~f~p~~~~~-~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~Lie 592 (816)
++ ..++.+||||+|.+.|.|..... ... ++.+|+ ++++++|+|+||+.+.||++.|++
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~ 249 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVDAL-----------------RAQLGL--PDGKKIVLYSGNIGEKQGLELVID 249 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchHHH-----------------HHHcCC--CCCCEEEEEcCccccccCHHHHHH
Confidence 33 56899999999998887653211 011 122555 556789999999999999999999
Q ss_pred HHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEEC
Q 003492 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (816)
Q Consensus 593 A~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~P 672 (816)
|+.++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. ||++|+|
T Consensus 250 a~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~p 310 (412)
T PRK10307 250 AARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLP 310 (412)
T ss_pred HHHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEe
Confidence 9998854 57899999999976 57788899999986 799999 6778899999995 9999999
Q ss_pred CCCCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003492 673 AFYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (816)
Q Consensus 673 S~~Eg----FGltvlEAMA~GlPVIaT~~gG--~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~a 746 (816)
|..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|+++++++|.+++ +|++.+++|+++|
T Consensus 311 s~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a 384 (412)
T PRK10307 311 QKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVA 384 (412)
T ss_pred eccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHH
Confidence 99998 5777899999999999999876 468886 5999999999999999996655 8999999999999
Q ss_pred HHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 747 LKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 747 r~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
++.+++ +|||+.++++++++|+..
T Consensus 385 ~~~~~~-----~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 385 REYAER-----TLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHH-----HcCHHHHHHHHHHHHHHH
Confidence 999998 999999999999998743
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=2.5e-40 Score=373.02 Aligned_cols=366 Identities=16% Similarity=0.197 Sum_probs=273.3
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|+..+...+. . ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~----~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI----R----YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc----c----ccc
Confidence 7999997766 56799999999 77788899999999 998764322111 1 112
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEe
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 437 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~--lva~lla~~~gip~v~t~ 437 (816)
.++.++++|...... .........+...+.+.+. +.+|||||+|+..+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~--------~~~~~~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN--------QSTLPTFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC--------CccccchhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 367888888653210 0011111112222222222 348999999987653 346777888999999999
Q ss_pred cCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCC
Q 003492 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (816)
Q Consensus 438 H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f 517 (816)
|+..... +..... .. ......++.+|.+|++|....+... ...+++
T Consensus 121 h~~~~~~----~~~~~~----~~-----~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIH----TN-----KLLRFSLADVDHVICVSHTSKENTV-------------------LRASLD-- 166 (398)
T ss_pred ccccccc----chhhHH----hh-----HHHHHhhccCCEEEEecHhHhhHHH-------------------HHhCCC--
Confidence 9854211 100000 00 0123457899999999987654110 011232
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHh
Q 003492 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (816)
Q Consensus 518 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (816)
..++.+||||+|.+.|.|.... .++++++|+++||+.+.||++.+++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999998877664321 035678999999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCC
Q 003492 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (816)
Q Consensus 598 ~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~Eg 677 (816)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88889999999999875 567889999999999999999 7778899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 003492 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIIC 757 (816)
Q Consensus 678 FGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~ 757 (816)
||++++|||+||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~----- 350 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKK----- 350 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHh-----
Confidence 9999999999999999999999999998764 44454 48999999997766 5666666788999999999
Q ss_pred CCCHHHHHHHHHHHHHHh
Q 003492 758 RYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 758 ~ytw~~~a~~ll~ly~~y 775 (816)
+|||+.++++++++|+..
T Consensus 351 ~fs~~~~~~~~~~~y~~l 368 (398)
T cd03796 351 MYSWEDVAKRTEKVYDRI 368 (398)
T ss_pred hCCHHHHHHHHHHHHHHH
Confidence 999999999999998753
No 16
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=3.9e-40 Score=379.51 Aligned_cols=432 Identities=17% Similarity=0.163 Sum_probs=292.0
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCc--cce---
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLE--- 354 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~--~~e--- 354 (816)
||++||+..+|- ..+||...++. .|+++|+++||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999887642 36899999999 67777899999999 9998766432110000 000
Q ss_pred ------------eecCCCceEEEEecCCCccccccccc--ccccchh----hHHHHHHHHHHHHHHHhCCCceEEEEcCC
Q 003492 355 ------------RVSGTEHTHILRVPFRSEKGILRQWI--SRFDVWP----YLETFTEDVGSEITAELQGFPDFIIGNYS 416 (816)
Q Consensus 355 ------------~v~g~~~v~I~rvp~~~~~~~~~~~i--sr~~i~~----yl~~f~~~~~~~i~~~l~~kPDIIh~h~~ 416 (816)
.....+++.++++....... +.++ +....+. ....|...+...+. .+..+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~-~~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALELLR-RLGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHHHHH-hcCCCCcEEEECch
Confidence 00112356777665433110 0000 0001111 11234434444333 33679999999999
Q ss_pred CchHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhhh--------hhhhhhhchhhhhHHHHHHhhCCEEEecC
Q 003492 417 DGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWK--------KFDEKYHFSCQFTADLIAMNNADFIITST 482 (816)
Q Consensus 417 ~~~lva~lla~~~------gip~v~t~H~l~~~k~~~~~~~~~--------~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (816)
.+++++.+++... ++|+|+|+|++............. .....+.+...+..+..++..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9988888888774 899999999986543211110000 00011122334556788999999999999
Q ss_pred HHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccccc
Q 003492 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (816)
Q Consensus 483 ~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (816)
+...+...+..+ ...+.++ +.....|+.+|+||+|.+.|.|.........--....+....++...++
T Consensus 219 ~~~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 877664322100 0000000 0112468999999999999988643221100000001111112222335
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (816)
++|+..++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|.. ...+.+++++.++ .++
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~ 352 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGR 352 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCc
Confidence 57765457889999999999999999999999998764 499999999854 3456777777776 567
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCC------eEEEECCC
Q 003492 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA------SGFHIDPY 716 (816)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~------~G~li~p~ 716 (816)
+.+.+ ..+.+++..+++ +||++++||.+|+||++++|||+||+|||+|+.||+.|+|.++. +|++++++
T Consensus 353 v~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~ 427 (476)
T cd03791 353 VAVLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY 427 (476)
T ss_pred EEEEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC
Confidence 88776 345556667777 59999999999999999999999999999999999999999988 99999999
Q ss_pred CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 717 d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
|+++++++|.++++ ...+++.|.++++++++ + .|||+.++++|+++|+
T Consensus 428 ~~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~-----~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 428 NADALLAALRRALA-LYRDPEAWRKLQRNAMA---Q-----DFSWDRSAKEYLELYR 475 (476)
T ss_pred CHHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---c-----CCChHHHHHHHHHHHh
Confidence 99999999988763 34578999999888764 4 7999999999999985
No 17
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.3e-39 Score=376.05 Aligned_cols=430 Identities=16% Similarity=0.190 Sum_probs=281.7
Q ss_pred cceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccC-ccceee
Q 003492 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRLERV 356 (816)
Q Consensus 278 ~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~-~~~e~v 356 (816)
.|||++||....| ...|||..-++- .|.++|+++||+|. |+++.+..-...... .....+
T Consensus 3 ~~~il~v~~E~~p-------~~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~~~~~~~ 63 (485)
T PRK14099 3 PLRVLSVASEIFP-------LIKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDAEQVHSF 63 (485)
T ss_pred CcEEEEEEecccc-------ccCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCceEEEEE
Confidence 4899999987764 357999998888 67777899999999 998876543111000 011111
Q ss_pred c---C---------CCceEEEEecCCCccccccccccccc-ch---------hhHHH---HHHHHHHHHHHHh--CCCce
Q 003492 357 S---G---------TEHTHILRVPFRSEKGILRQWISRFD-VW---------PYLET---FTEDVGSEITAEL--QGFPD 409 (816)
Q Consensus 357 ~---g---------~~~v~I~rvp~~~~~~~~~~~isr~~-i~---------~yl~~---f~~~~~~~i~~~l--~~kPD 409 (816)
. + .+++.++-+-.. .+..|.. ++ ...++ |...++ ++...+ +.+||
T Consensus 64 ~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~-~~~~~~~~~~~pD 135 (485)
T PRK14099 64 PDLFGGPARLLAARAGGLDLFVLDAP-------HLYDRPGNPYVGPDGKDWPDNAQRFAALARAAA-AIGQGLVPGFVPD 135 (485)
T ss_pred eeeCCceEEEEEEEeCCceEEEEeCh-------HhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHH-HHHhhhccCCCCC
Confidence 1 1 012222211100 1111111 11 11222 333232 333322 46899
Q ss_pred EEEEcCCCchHHHHHHHHH--cCCcEEEEecCCCcccCCCChh------hhhhhh-hhhhchhhhhHHHHHHhhCCEEEe
Q 003492 410 FIIGNYSDGNLVASLLAYK--MGITQCTIAHALEKTKYPDSDI------YWKKFD-EKYHFSCQFTADLIAMNNADFIIT 480 (816)
Q Consensus 410 IIh~h~~~~~lva~lla~~--~gip~v~t~H~l~~~k~~~~~~------~~~~~~-~~y~f~~~~~~e~~a~~~AD~IIt 480 (816)
|||+|.|.+++++.++... .++|.|+|+|++.......... .+..+. ....+.......+.++..||.|+|
T Consensus 136 IiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vit 215 (485)
T PRK14099 136 IVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITT 215 (485)
T ss_pred EEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeee
Confidence 9999999999888777642 4689999999975433211110 010000 000111122335678899999999
Q ss_pred cCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccc
Q 003492 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (816)
Q Consensus 481 ~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (816)
+|+..++...+... ...+.+.+ .....|+.+|+||||++.|.|.++.......-...++.+..++...
T Consensus 216 VS~~~a~ei~~~~~------g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 216 VSPTYALEIQGPEA------GMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred cChhHHHHHhcccC------CcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 99887663321100 00000000 0125689999999999999886542100000000000011111223
Q ss_pred ccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003492 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (816)
Q Consensus 561 ~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (816)
++.+|+..+++.++|+++||+.+.||++.+++|+.++.+ .+++|+|+|+|+. ...+.+++++++++
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~-- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP-- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--
Confidence 355787544567899999999999999999999999875 3699999999864 34567788888765
Q ss_pred CcE-EEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------CeE
Q 003492 641 GQF-RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASG 710 (816)
Q Consensus 641 ~~V-~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg---------~~G 710 (816)
+++ .|+|+ .+++..++..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|
T Consensus 350 ~~v~~~~G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G 423 (485)
T PRK14099 350 GQIGVVIGY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATG 423 (485)
T ss_pred CCEEEEeCC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCce
Confidence 455 68883 46788877435999999999999999999999999999999999999999876 689
Q ss_pred EEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 711 ~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
++++|+|+++++++|.+++ .+.+|++.|++|++++++ + +|||+.++++|+++|+..
T Consensus 424 ~l~~~~d~~~La~ai~~a~-~l~~d~~~~~~l~~~~~~---~-----~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 424 VQFSPVTADALAAALRKTA-ALFADPVAWRRLQRNGMT---T-----DVSWRNPAQHYAALYRSL 479 (485)
T ss_pred EEeCCCCHHHHHHHHHHHH-HHhcCHHHHHHHHHHhhh---h-----cCChHHHHHHHHHHHHHH
Confidence 9999999999999998754 245899999999999863 4 799999999999998753
No 18
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=5.6e-39 Score=363.53 Aligned_cols=281 Identities=17% Similarity=0.240 Sum_probs=231.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--HcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecC
Q 003492 405 QGFPDFIIGNYSDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~lva~lla~--~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (816)
+.+||+||+|++..+..+..+++ ..+.|.++|+|+....... ....+.. .....++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~--------~~~~~~~-----~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE--------VLNHYTP-----EYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch--------hhhhhhH-----HHHHHHHhCCEEEECC
Confidence 45899999999887777777766 3455778899975432110 0011110 1224578999999999
Q ss_pred HHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccccc
Q 003492 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (816)
Q Consensus 483 ~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (816)
....+... ..|++ ..|+.+||||+|.+.|.+....
T Consensus 183 ~~~~~~l~--------------------~~g~~--~~ki~vi~nGvd~~~f~~~~~~----------------------- 217 (406)
T PRK15427 183 DLWAGRLQ--------------------KMGCP--PEKIAVSRMGVDMTRFSPRPVK----------------------- 217 (406)
T ss_pred HHHHHHHH--------------------HcCCC--HHHEEEcCCCCCHHHcCCCccc-----------------------
Confidence 87665221 12343 5689999999999887653210
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (816)
...++..|+++||+.+.||++.+++|++.+++..++++|+|+|+|+. .++++++++++++.++
T Consensus 218 -----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 218 -----APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred -----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 02345679999999999999999999999988888999999999976 6789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEECCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCC
Q 003492 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716 (816)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~------EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~ 716 (816)
|.|+| .++.+++..+++. +|+||+||.. ||||++++||||||+|||+|+.||..|+|.++.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 7778999999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 717 HPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 717 d~~~lA~~I~~~l~~l~~-dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
|+++++++|.+++ + ||+.+++|+++|++++.+ +|+|+..++++.++|+.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~-----~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVET-----DFNQQVINRELASLLQA 405 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHhh
Confidence 9999999997655 7 999999999999999999 99999999999999864
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=1.7e-38 Score=354.46 Aligned_cols=378 Identities=23% Similarity=0.318 Sum_probs=272.7
Q ss_pred ceEEEEccccCccccccCCCCC-cccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeec
Q 003492 279 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~-~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~ 357 (816)
|||++++..++ |+ .||.++++. +|+++|+++ |+|+ |+|.... . .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~---------~----~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQ---------R----F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCc---------h----h
Confidence 79999987654 44 499999999 666667776 7777 6664311 0 0
Q ss_pred CCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003492 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (816)
Q Consensus 358 g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~ 437 (816)
..+++.+.+++..... ......+..+..++. ......+||+||+|.+..++.+.++++..++|++++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235677766543210 111112222222221 1111347999999998887777877778899999999
Q ss_pred cCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCC
Q 003492 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (816)
Q Consensus 438 H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f 517 (816)
|++......... .....+.+.. ..+...++.+|.||++|+...+...+. | .|++
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~---~---------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKY---Y---------------PDLD-- 167 (388)
T ss_pred eccccccccccc----ccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHH---c---------------CCCC--
Confidence 987542211000 0001111111 235668899999999998876532211 0 1232
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHh
Q 003492 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (816)
Q Consensus 518 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (816)
..++.+||||+|.+.|.|......+ ..+|+ ++++++|+|+||+.+.||++.+++|+.++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 5689999999999888765332211 22454 56778999999999999999999999987
Q ss_pred hccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCC
Q 003492 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (816)
Q Consensus 598 ~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L-~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E 676 (816)
. ++++++++|+++. ..+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|++|+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 4789999998765 11234566777777665 34577765 26778999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH------HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003492 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP------DQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (816)
Q Consensus 677 gFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~------~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~ 750 (816)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +||+.+++|++++++.+
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 88888886554 89999999999999999
Q ss_pred HhhcccCCCCHHHHHHHHHHHHHH
Q 003492 751 YERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 751 ~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
.+ +|||+.+++++.++|+.
T Consensus 368 ~~-----~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 368 EE-----EFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HH-----hCCHHHHHHHHHHHHHh
Confidence 98 99999999999999864
No 20
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=1.8e-38 Score=365.34 Aligned_cols=374 Identities=16% Similarity=0.214 Sum_probs=264.2
Q ss_pred CcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceee
Q 003492 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (816)
Q Consensus 277 ~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v 356 (816)
+.|||++++ +..| .+..||.+.++. +|+++|+++||+|+ |+|...... +..
T Consensus 57 ~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~~ 107 (465)
T PLN02871 57 RPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QEF 107 (465)
T ss_pred CCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------ccc
Confidence 458999997 3332 245799999999 77777899999999 998653211 011
Q ss_pred cCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003492 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (816)
Q Consensus 357 ~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~lva~lla~~~gip~v~ 435 (816)
.++.+.+++.... +. ..... +.+ .+...+.+.+. +.+|||||+|++.. .+.+.++++..++|+|+
T Consensus 108 ---~g~~v~~~~~~~~-~~----~~~~~-~~~--~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~ 173 (465)
T PLN02871 108 ---HGAKVIGSWSFPC-PF----YQKVP-LSL--ALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLVM 173 (465)
T ss_pred ---cCceeeccCCcCC-cc----CCCce-eec--cCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEEE
Confidence 1334433322111 00 00000 000 01112222332 24899999998654 44566678889999999
Q ss_pred EecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCC
Q 003492 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (816)
Q Consensus 436 t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~ 515 (816)
+.|+......+.....+ ..... ...+...++.+|.|+++|....+...+ .|..
T Consensus 174 ~~h~~~~~~~~~~~~~~--~~~~~-----~~~~r~~~~~ad~ii~~S~~~~~~l~~--------------------~~~~ 226 (465)
T PLN02871 174 SYHTHVPVYIPRYTFSW--LVKPM-----WDIIRFLHRAADLTLVTSPALGKELEA--------------------AGVT 226 (465)
T ss_pred EEecCchhhhhcccchh--hHHHH-----HHHHHHHHhhCCEEEECCHHHHHHHHH--------------------cCCC
Confidence 99986432211111111 00000 112345678999999999887653221 1111
Q ss_pred CCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHH
Q 003492 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (816)
Q Consensus 516 ~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (816)
...++.+||||+|.+.|.|......... .+... .+++++|+|+||+.+.||++.++++++
T Consensus 227 -~~~kv~vi~nGvd~~~f~p~~~~~~~~~------------------~~~~~-~~~~~~i~~vGrl~~~K~~~~li~a~~ 286 (465)
T PLN02871 227 -AANRIRVWNKGVDSESFHPRFRSEEMRA------------------RLSGG-EPEKPLIVYVGRLGAEKNLDFLKRVME 286 (465)
T ss_pred -CcCeEEEeCCccCccccCCccccHHHHH------------------HhcCC-CCCCeEEEEeCCCchhhhHHHHHHHHH
Confidence 1468999999999999877543221111 11110 346789999999999999999999998
Q ss_pred HhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCC
Q 003492 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (816)
Q Consensus 596 ~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~ 675 (816)
++ ++++|+|+|+|+. .+.++++++. .+|.|+| .++.+++..+|+. +|+||+||..
T Consensus 287 ~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~ 341 (465)
T PLN02871 287 RL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSES 341 (465)
T ss_pred hC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcc
Confidence 76 5799999999875 4566666653 4699999 6777899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccccc---CCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 676 EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d---g~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
|+||++++||||||+|||+|+.||..|++.+ +.+|++++++|+++++++|.+++ +|++.+++|++++++.++
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~- 416 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEVE- 416 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999 99999999999999999997665 899999999999999986
Q ss_pred hcccCCCCHHHHHHHHHH-HHHHh
Q 003492 753 RIIICRYTWKIYSERLMT-LAGVY 775 (816)
Q Consensus 753 ~~~~~~ytw~~~a~~ll~-ly~~y 775 (816)
+|||+.+++++++ +|+..
T Consensus 417 -----~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 417 -----KWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred -----hCCHHHHHHHHHHHHHHHH
Confidence 5999999999998 57543
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.7e-38 Score=348.47 Aligned_cols=366 Identities=19% Similarity=0.303 Sum_probs=266.5
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g 358 (816)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+... . ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~----~------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRL----D------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcch----h------hh
Confidence 68999973 34699999999 77777899999999 9986532110 0 01
Q ss_pred CCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHH----cCCcEE
Q 003492 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK----MGITQC 434 (816)
Q Consensus 359 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~----~gip~v 434 (816)
.+++.+..++.... + ......+.......+.+.+. +.+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-P-------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-c-------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333332211 0 00111111122223333332 348999999987664444444432 279999
Q ss_pred EEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCC
Q 003492 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (816)
Q Consensus 435 ~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi 514 (816)
++.|+........ ...+. .....+++.+|.|+++|....+...+. | +
T Consensus 116 ~~~h~~~~~~~~~--------~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~---~----------------~- 162 (371)
T cd04962 116 TTLHGTDITLVGQ--------DPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL---F----------------D- 162 (371)
T ss_pred EEEcCCccccccc--------cccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh---c----------------C-
Confidence 9999753211100 11111 123457889999999998875522111 0 1
Q ss_pred CCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHH
Q 003492 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (816)
Q Consensus 515 ~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~ 594 (816)
...++.+||||+|...|.+......+ ..++. .+++++++++||+.+.||++.+++++
T Consensus 163 --~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 163 --ITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred --CcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 15689999999998877654332211 12444 45678899999999999999999999
Q ss_pred HHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCC
Q 003492 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (816)
Q Consensus 595 ~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~ 674 (816)
..+.+. .+++|+++|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 5689999999976 56788888999999999999943 357788885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhc
Q 003492 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERI 754 (816)
Q Consensus 675 ~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~ 754 (816)
+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +||+.+.+|++++++.+.+
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~-- 353 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAE-- 353 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999999999999999999999996655 8999999999999999888
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 003492 755 IICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 755 ~~~~ytw~~~a~~ll~ly~~ 774 (816)
+|||+.+++++.++|+.
T Consensus 354 ---~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 354 ---RFDSERIVPQYEALYRR 370 (371)
T ss_pred ---hCCHHHHHHHHHHHHHh
Confidence 89999999999999863
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.6e-37 Score=348.78 Aligned_cols=375 Identities=15% Similarity=0.207 Sum_probs=273.7
Q ss_pred CcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceee
Q 003492 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (816)
Q Consensus 277 ~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v 356 (816)
|+-||++++.--+|-|. ...||+++++. +++++|+. +|+ |+|...+... ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 67799998877776542 34799999999 77777743 999 9998755311 111
Q ss_pred cCCCceEEEEecCCCccc-ccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003492 357 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (816)
Q Consensus 357 ~g~~~v~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~ 435 (816)
...+|+.++++++....+ ...+|.+- .-+ .|...+...+......++||||+|.... +...+..+..++|.+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~~-~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSMK-LYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcHH-hHHHHHhhCCCCCEEE
Confidence 112356777776654211 12233222 122 2333344433332235799999998553 4444445556789999
Q ss_pred EecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCC
Q 003492 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (816)
Q Consensus 436 t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~ 515 (816)
+.|.... + ..++.++.||++|....+...+ +.+
T Consensus 127 ~~h~~~~--------------~------------~~~~~~~~ii~~S~~~~~~~~~---------------------~~~ 159 (380)
T PRK15484 127 HMHNAFE--------------P------------ELLDKNAKIIVPSQFLKKFYEE---------------------RLP 159 (380)
T ss_pred EEecccC--------------h------------hHhccCCEEEEcCHHHHHHHHh---------------------hCC
Confidence 9995321 0 1234678999999877552111 111
Q ss_pred CCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHH
Q 003492 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (816)
Q Consensus 516 ~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (816)
..++.+||||+|.+.|.+......+ +.+|+ +.++++|+|+||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 4579999999999888764332211 22454 456788999999999999999999999
Q ss_pred HhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCC
Q 003492 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (816)
Q Consensus 596 ~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~ 675 (816)
++.+.+|+++|+|+|++... .+.+...+.+.+++++++++ ++|.|+| .++.+++..+++. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998652 11123345667777777775 5799999 6778899999995 9999999975
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEE-EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhh
Q 003492 676 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (816)
Q Consensus 676 -EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~-li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~ 753 (816)
|+||++++||||||+|||+|+.||+.|++.++.+|+ +++|.|+++++++|.+++ +|++. .+|+++|++.+.+
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~- 360 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFS- 360 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHH-
Confidence 999999999999999999999999999999999999 568999999999996655 89985 7899999999998
Q ss_pred cccCCCCHHHHHHHHHHHHHHh
Q 003492 754 IIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 754 ~~~~~ytw~~~a~~ll~ly~~y 775 (816)
+|||+.++++++++|..+
T Consensus 361 ----~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 361 ----KYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred ----hCCHHHHHHHHHHHHHHh
Confidence 999999999999998654
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=5e-37 Score=345.75 Aligned_cols=367 Identities=15% Similarity=0.189 Sum_probs=248.4
Q ss_pred HHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccccccchhhHHHHHH---
Q 003492 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTE--- 394 (816)
Q Consensus 318 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~--- 394 (816)
+||++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888899999999 9987632210 11 57888877553311 122233222211
Q ss_pred ---HHHHHHHH--HhCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCC----hhhhhhhhhhhhchhh
Q 003492 395 ---DVGSEITA--ELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDS----DIYWKKFDEKYHFSCQ 464 (816)
Q Consensus 395 ---~~~~~i~~--~l~~kPDIIh~h~~~~~lva~lla~~-~gip~v~t~H~l~~~k~~~~----~~~~~~~~~~y~f~~~ 464 (816)
.+.+.+.. .-+.+||+||+|...+ .+..+++. .++|+|...|.+......+. ....... ...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLD-DALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchh-HHHHHHHh
Confidence 12222222 1245899999997665 22334444 35888876654322211100 0000000 00111111
Q ss_pred hhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHh
Q 003492 465 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 544 (816)
Q Consensus 465 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~ 544 (816)
.......++.+|.+|++|....+...+ .+..|+.|||||+|++.|.|.........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~------------------------~~~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPA------------------------ELRSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcH------------------------hhccceEEeCCCccccccCCCchhhhccc
Confidence 112345789999999999887652111 11468999999999999887543221110
Q ss_pred hhhccchhhccCccccccccCCCCCCCCcEEEEEec-cCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHH
Q 003492 545 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 623 (816)
Q Consensus 545 ~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~ 623 (816)
...++ .+++++|+|+|| +.+.||++.+++|+.++.+..|+++|+|+|++...........
T Consensus 203 -----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~ 263 (396)
T cd03818 203 -----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDG 263 (396)
T ss_pred -----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCc
Confidence 11112 356789999998 9999999999999999988889999999998542111100000
Q ss_pred HHHHHHH-HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003492 624 IAEIEKM-HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 702 (816)
Q Consensus 624 ~~~~~~l-~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~E 702 (816)
..+.+.+ +++..+++ .++|.|+| .++.+++..+++. +|++|+||..|++|++++||||||+|||+|+.||..|
T Consensus 264 ~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e 337 (396)
T cd03818 264 ESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVRE 337 (396)
T ss_pred ccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchh
Confidence 0112222 22222222 47899999 7788999999995 9999999999999999999999999999999999999
Q ss_pred ccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 703 IIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 703 iI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
++.++.+|++++++|+++++++|.+++ +||+.+.+|+++|++++.+ +|||+.++++|++
T Consensus 338 ~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~-----~fs~~~~~~~~~~ 396 (396)
T cd03818 338 VITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALR-----YDLLSVCLPRQLA 396 (396)
T ss_pred hcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH-----hccHHHHHHHHhC
Confidence 999999999999999999999996655 8999999999999999998 8999999999863
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=4.4e-37 Score=343.47 Aligned_cols=386 Identities=20% Similarity=0.274 Sum_probs=262.9
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g 358 (816)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+.. .+. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HCF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hcc--hhccCC
Confidence 79999986543 589999999 77777899999999 998642211 000 011111
Q ss_pred CCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHH--HHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003492 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT--AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (816)
Q Consensus 359 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~--~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t 436 (816)
++.+...+.....++ .++ ...+..+.......+. .....++|+||+|....+.. ++....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~--~~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVP--LLKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHH--HHHHhcCCcEEEE
Confidence 122222211100000 000 0011111111111111 12246899999987654332 2233334899999
Q ss_pred ecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCC
Q 003492 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (816)
Q Consensus 437 ~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~ 516 (816)
.|............ ++ ..++... ...+..+++.+|.|+++|....+...+.. ....
T Consensus 122 ~h~~~~~~~~~~~~-~~---~~~~~~~-~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGSL-LK---RLYRKPF-DWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHHhcCCCcH-HH---HHHHHHH-HHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 99432111000111 11 1111100 12366789999999999987655322111 0111
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHH
Q 003492 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (816)
Q Consensus 517 f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (816)
..++.+|+||+|.+.|.|....... +..+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888664322100 11122 4567899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChHHHHHHHHccccEEEEC
Q 003492 597 NSQLR---ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (816)
Q Consensus 597 l~~~~---p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~-~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~P 672 (816)
+.+.. ++++|+++|+++. ...++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDP----RVAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCC----CCchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98776 7999999999865 122334566889999999 99999999999 6778899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 673 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 673 S~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 8999999996655 8999999999999999998
Q ss_pred hcccCCCCHHHHHHHH
Q 003492 753 RIIICRYTWKIYSERL 768 (816)
Q Consensus 753 ~~~~~~ytw~~~a~~l 768 (816)
+|||+.+++++
T Consensus 382 -----~~s~~~~~~~~ 392 (392)
T cd03805 382 -----KFSTEAFAERL 392 (392)
T ss_pred -----hcCHHHHhhhC
Confidence 99999998864
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=7.3e-37 Score=340.50 Aligned_cols=365 Identities=16% Similarity=0.196 Sum_probs=262.4
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||++|.++. ..||++.++. +|++.|.+.|+++. |++....+ ....... .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~----~~~~~~~----~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS----AFRKRIQ----R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC----hhHHHHH----h
Confidence 677777543 3599999999 67777888999988 77632111 1111111 1
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~-v~t~H 438 (816)
.++.+++++.... ..+ .+...+.+.+.+ .+|||||+|+..+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~----~~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDV----AVYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CCh----HHHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2567777654321 011 112223333433 3899999997644 34455666778775 34455
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
+....... ...| .+.+ ........+|.+|++|....+...+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRW-----LRRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHHH-----HHHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211110 1111 1111 12234556899999998876532211 1232 5
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.+||||+|.+.|.|.........+ .... +.++++|+++||+.+.||++.+++|+.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~~-----------------~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPILP-----------------PDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhhH-----------------hhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 689999999999888765322111100 0111 356789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCC
Q 003492 599 QLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (816)
Q Consensus 599 ~~~p----~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~ 674 (816)
+..+ +++|+++|+|+. .+.+++.++++++.+++.|+|.+ .++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 789999999876 56788899999999999999942 357888884 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhc
Q 003492 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERI 754 (816)
Q Consensus 675 ~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~ 754 (816)
+||||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+++++|++++.+
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~-- 355 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQ-- 355 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999999999999999999999999999999999999997655 7999999999999999988
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 003492 755 IICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 755 ~~~~ytw~~~a~~ll~ly~~ 774 (816)
+|||+.++++++++|+.
T Consensus 356 ---~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 356 ---QFSINAMVAAYAGLYDQ 372 (374)
T ss_pred ---hCCHHHHHHHHHHHHHH
Confidence 89999999999999974
No 26
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1.5e-36 Score=335.10 Aligned_cols=280 Identities=19% Similarity=0.293 Sum_probs=229.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 406 ~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
.+||+||+|....++.+..++++.|+|++++.|+.......... + ... ... ....+...++.+|.|+++|+..
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~--~--~~~-~~~--~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL--L--RSR-WAL--YARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh--c--ccc-hhH--HHHHHHHHHHhcCEEEECCHHH
Confidence 48999999988777888888999999999999975432211110 0 000 000 1112445678999999999887
Q ss_pred HhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccC
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg 565 (816)
.+...+ .|++ ..++.++|||+|.+.|.+...
T Consensus 154 ~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 652211 1333 568999999999877655311
Q ss_pred CCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003492 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (816)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (816)
..+++.++++|++.+.||++.+++|+..+.+..++++|+|+|+|+. .++++++++++++.++|+|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988888999999998865 5678888999999999999
Q ss_pred eccccCcCChHHHHHHHHccccEEEECCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH
Q 003492 646 IAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (816)
Q Consensus 646 lG~~~~~v~~~el~~~la~aaDvfV~PS~------~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~ 719 (816)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 7788999999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
+++++|.+++ +|++.+++++.++++++.+ +|||+.+++++.+
T Consensus 325 ~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~-----~~s~~~~~~~l~~ 366 (367)
T cd05844 325 ALAAALGRLL----ADPDLRARMGAAGRRRVEE-----RFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHHH----cCHHHHHHHHHHHHHHHHH-----HCCHHHHHHHHhc
Confidence 9999997665 8999999999999999988 8999999999876
No 27
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=5.9e-36 Score=354.65 Aligned_cols=458 Identities=13% Similarity=0.161 Sum_probs=294.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCchh-------HHHHhhccCCccCCCCcHHHHHHHHHHHHHhhcCCCcchHhHhhcCC
Q 003492 203 ISRLQSSLSKAEDHLSKLPPDTPFSQ-------FEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRL 275 (816)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~g~~~~r~~~~~~~~~~~~~~p~~~~le~f~~~~ 275 (816)
.++=..++++|.+..+.=. .-|.+ ....+|.+|=|.---++.-|+.-+-+++...-+-- +...+ ...
T Consensus 204 ~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~ 277 (694)
T PRK15179 204 LWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYD---AGP 277 (694)
T ss_pred HHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcC-ccccc---CCC
Confidence 4455556666665554432 12222 22356778877666667778888878777654221 11000 111
Q ss_pred CCcc-eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCC------------ceeecceEEecccC
Q 003492 276 PMVF-NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGL------------DISPKILIVTRLIP 342 (816)
Q Consensus 276 p~~~-rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~Gh------------eV~~~i~VvT~~~p 342 (816)
-... ||+++.+... .||.+.+++ .|+..|.++|. ++. |++++..
T Consensus 278 ~~~~~rIl~vi~sl~-----------~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~--V~~~~~~-- 334 (694)
T PRK15179 278 ESFVGPVLMINGSLG-----------AGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ--VVCRSLR-- 334 (694)
T ss_pred CCCcceEEEEeCCCC-----------CCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE--EEEEecc--
Confidence 1234 8999875443 599999999 55556677744 233 2243221
Q ss_pred CCCCC-ccCccceeecCCCceEEEEecCCCcccccc--ccccccc----chh-hHHHHHHHHHHHHHHHhCCCceEEEEc
Q 003492 343 DAKGT-TCNQRLERVSGTEHTHILRVPFRSEKGILR--QWISRFD----VWP-YLETFTEDVGSEITAELQGFPDFIIGN 414 (816)
Q Consensus 343 ~~~~~-~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~--~~isr~~----i~~-yl~~f~~~~~~~i~~~l~~kPDIIh~h 414 (816)
...+. .+...+.. .|+.+..++..+..+... .+..... ..| ........+.+.+. +.+|||||+|
T Consensus 335 ~~~g~~~~~~~L~~----~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk---~~kpDIVH~h 407 (694)
T PRK15179 335 SREGADFFAATLAD----AGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMR---SSVPSVVHIW 407 (694)
T ss_pred cccCcchHHHHHHh----CCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHH---HcCCcEEEEe
Confidence 11111 11111111 245666655443211000 0000000 001 11112223333333 3489999999
Q ss_pred CCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccc
Q 003492 415 YSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493 (816)
Q Consensus 415 ~~~~~lva~lla~~~gip~v~-t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~ 493 (816)
.+.+++++.++++..++|+++ +.|++...... . .|+ ..|... ...+....++.+|++|....+...
T Consensus 408 ~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~---~~~~~l----~~~l~~~~~~i~Vs~S~~~~~~l~--- 474 (694)
T PRK15179 408 QDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYR---VEYDII----YSELLKMRGVALSSNSQFAAHRYA--- 474 (694)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHH---HHHHHH----HHHHHhcCCeEEEeCcHHHHHHHH---
Confidence 999988999999889999876 56765322111 1 111 111111 111222234566777765543111
Q ss_pred cccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCc
Q 003492 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP 573 (816)
Q Consensus 494 ~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~ 573 (816)
...|++ ..|+.|||||||...|.+..........+ ..+. +.+.+
T Consensus 475 ----------------~~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~~~----------------~~~~--~~~~~ 518 (694)
T PRK15179 475 ----------------DWLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMAQF----------------DART--SDARF 518 (694)
T ss_pred ----------------HHcCCC--hhHEEEECCCcCHHhcCCCchhhHHHHhh----------------cccc--CCCCe
Confidence 112333 56999999999998886533222111100 0111 34567
Q ss_pred EEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcC
Q 003492 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 653 (816)
Q Consensus 574 iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v 653 (816)
+|+++||+.+.||++.+++|+.++.+..|+++|+|+|+|+. .++++++++++++.++|.|+|++.
T Consensus 519 vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~~lgL~~~V~flG~~~--- 583 (694)
T PRK15179 519 TVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQRLGMGERILFTGLSR--- 583 (694)
T ss_pred EEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHHHcCCCCcEEEcCCcc---
Confidence 89999999999999999999999988889999999999976 678999999999999999999532
Q ss_pred ChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH--HHHHHHHHHHHHh
Q 003492 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP--DQAAELMADFFGK 731 (816)
Q Consensus 654 ~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~--~~lA~~I~~~l~~ 731 (816)
++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++++|+ ++++++|.+++..
T Consensus 584 ---dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 584 ---RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred ---hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 5777888 599999999999999999999999999999999999999999999999998874 6899999887755
Q ss_pred hcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 732 CKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 732 l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
+..++ .+++++++++.+ +|||+.++++++++|+
T Consensus 660 l~~~~----~l~~~ar~~a~~-----~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 660 CAADP----GIARKAADWASA-----RFSLNQMIASTVRCYQ 692 (694)
T ss_pred hhccH----HHHHHHHHHHHH-----hCCHHHHHHHHHHHhC
Confidence 54554 567789999988 8999999999999985
No 28
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.8e-35 Score=324.93 Aligned_cols=361 Identities=17% Similarity=0.206 Sum_probs=253.9
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 69999998885 45799999999 77778899999999 99865332210 0112
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 439 (816)
.+++++++|.....+ .....+ . ...+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~-~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--D-ILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--H-HHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 367888877653211 000000 0 001111111 133566666554444 34444556679999999998
Q ss_pred CCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCC
Q 003492 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (816)
Q Consensus 440 l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ 519 (816)
...... .|......+ ....+..+++.+|.|+++|....+..+.. .|. +
T Consensus 118 ~~~~~~-----~~~~~~~~~----~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAKRY----LKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----D 165 (363)
T ss_pred cceeec-----ccccchhHH----HHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC----C
Confidence 643221 111111111 11235567889999999998876632111 122 2
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhc
Q 003492 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (816)
Q Consensus 520 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (816)
+ .+||||+|...+.+... .. ...+. .+++.++++||+.+.||++.+++|+.++.+
T Consensus 166 ~-~~i~ngv~~~~~~~~~~---~~------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDE---IL------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhh---hH------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 79999999876654111 00 11232 234568899999999999999999998864
Q ss_pred cCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCC-CC
Q 003492 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-EA 677 (816)
Q Consensus 600 ~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~-Eg 677 (816)
+++|+++|+++. ...+.+.+. .+++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677889999999 7778899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 003492 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIIC 757 (816)
Q Consensus 678 FGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~ 757 (816)
||++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|.+++ +|++.+.++++++++.+.+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~----- 347 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIRE----- 347 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHH-----
Confidence 99999999999999999999999999966 7999988775 888885554 8999999999999999998
Q ss_pred CCCHHHHHHHHHHHHH
Q 003492 758 RYTWKIYSERLMTLAG 773 (816)
Q Consensus 758 ~ytw~~~a~~ll~ly~ 773 (816)
+|||+.++++++++|+
T Consensus 348 ~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 348 KYTWEKIADQYEELYK 363 (363)
T ss_pred hCCHHHHHHHHHHHhC
Confidence 8999999999999874
No 29
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=5.1e-37 Score=324.20 Aligned_cols=378 Identities=17% Similarity=0.202 Sum_probs=287.2
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g 358 (816)
++|++||+|.| |.+||.+.++. .|++.|.+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 58999999998 56899999999 89999999999998 999988776543322
Q ss_pred CCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEE
Q 003492 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTI 436 (816)
Q Consensus 359 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~--lva~lla~~~gip~v~t 436 (816)
+.+..++.+|+... .+....|.+...+..+...+++ ++..|||+|.+.+. --+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 23578888887642 1222223222222222223333 38999999998874 44778889999999999
Q ss_pred ecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCC
Q 003492 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (816)
Q Consensus 437 ~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~ 516 (816)
-|++.......+. .. .+ .++ .++...|.+||+|..-.+.+ .....++
T Consensus 121 dHSlfGfad~~si-~~---n~----ll~-----~sL~~id~~IcVshtskent-------------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFADIGSI-LT---NK----LLP-----LSLANIDRIICVSHTSKENT-------------------VLRGALA- 167 (426)
T ss_pred ccccccccchhhh-hh---cc----eee-----eeecCCCcEEEEeecCCCce-------------------EEEeccC-
Confidence 9997553322111 11 11 111 35778999999997654421 1112233
Q ss_pred CCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHH
Q 003492 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (816)
Q Consensus 517 f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (816)
..|+.+|||.++...|.|..... ...+...|+.++||...||++.+++++.+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~---------------------------~S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADK---------------------------PSADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCcccc---------------------------CCCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 67999999999999999954321 02344679999999999999999999999
Q ss_pred hhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCC
Q 003492 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (816)
Q Consensus 597 l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E 676 (816)
+.+++|+++++|+|+||. ...+++..+++.++++|.++| .++.+++.+.+.+ .|+|+.||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999997 567888899999999999999 8889999999996 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhccc
Q 003492 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIII 756 (816)
Q Consensus 677 gFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~ 756 (816)
+||++++|||+||+|||+|+.||++|++.++ . ......+++++++++.+++.++.+.|. .-.+++.+
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~-i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~---- 349 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED-M-ITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKK---- 349 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc-c-eeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHH----
Confidence 9999999999999999999999999999664 2 224445799999999998877776654 33567777
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhHHhcHHHHHH
Q 003492 757 CRYTWKIYSERLMTLAGVYGFWKYVSKLERRE 788 (816)
Q Consensus 757 ~~ytw~~~a~~ll~ly~~y~~~~~~~~~~~~~ 788 (816)
.|+|+.+|++.+.+|....--+..+..+|..
T Consensus 350 -~y~w~dVa~rTekvy~r~~~t~~~~~~~r~~ 380 (426)
T KOG1111|consen 350 -MYSWKDVAERTEKVYDRAATTSIRNEQDRLK 380 (426)
T ss_pred -hccHHHHHHHHHHHHHHHhhccCcCHHHHHH
Confidence 8999999999999986655544444444444
No 30
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4.2e-36 Score=342.06 Aligned_cols=397 Identities=15% Similarity=0.121 Sum_probs=268.0
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCccc----
Q 003492 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG---- 374 (816)
Q Consensus 299 p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~---- 374 (816)
-..||.+..+..+|-++.+...+.=+-.|+.|...|-++||......|.++-...-.-.+.++..+-+++-..++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
T PRK15490 171 LGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIE 250 (578)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcccc
Confidence 4469999999977776544443333345777777777999997766665543211111344455555555222211
Q ss_pred --ccccccccccchhhHHHHHH-HHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCChh
Q 003492 375 --ILRQWISRFDVWPYLETFTE-DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDI 450 (816)
Q Consensus 375 --~~~~~isr~~i~~yl~~f~~-~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~-t~H~l~~~k~~~~~~ 450 (816)
.++.+++. +.|-. .+.. .+...++ ..+|||||+|...++..+.++++..|+|+++ +.|...... ...
T Consensus 251 ~~~~~~~~~~--~~~~~-~~~~~~l~~~ir---~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r- 321 (578)
T PRK15490 251 SPELRLLLSH--LPPVC-KYGIKHLVPHLC---ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKR- 321 (578)
T ss_pred chHHHHHHhc--CChHH-HHHHHHHHHHHH---HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhh-
Confidence 11111110 00111 1111 1222222 3599999999988888899999999999965 466521110 000
Q ss_pred hhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcC
Q 003492 451 YWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM 530 (816)
Q Consensus 451 ~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~ 530 (816)
.....+..... .......+| +++.|....+... ...|++ ..|+.+||||+|+
T Consensus 322 ---~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~-------------------~~lgip--~~KI~VIyNGVD~ 373 (578)
T PRK15490 322 ---LFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYA-------------------DWLKLE--AKHFQVVYNGVLP 373 (578)
T ss_pred ---HHHHHHHHhhh---hceeEecch-hhhccHHHHHHHH-------------------HHhCCC--HHHEEEEeCCcch
Confidence 01111110000 001122333 4445544333111 111343 6799999999999
Q ss_pred CCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEe
Q 003492 531 DIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 610 (816)
Q Consensus 531 ~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG 610 (816)
+.|.|.......... . ...++ +++.++|+++||+.+.||...+++++.++.+..|+++|+|+|
T Consensus 374 ~rf~p~~~~~~~~r~---~------------~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVG 436 (578)
T PRK15490 374 PSTEPSSEVPHKIWQ---Q------------FTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVG 436 (578)
T ss_pred hhcCccchhhHHHHH---H------------hhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEe
Confidence 988875422111000 0 01222 345678999999999999999999999988778999999999
Q ss_pred ccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCC
Q 003492 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL 690 (816)
Q Consensus 611 ~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~Gl 690 (816)
+|+. .++++++++++++.++|.|+|++ .++..+|+ .+|+||+||.+|+||++++|||+||+
T Consensus 437 dG~~------------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~La-aADVfVlPS~~EGfp~vlLEAMA~Gl 497 (578)
T PRK15490 437 DGDL------------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQ-KMNVFILFSRYEGLPNVLIEAQMVGV 497 (578)
T ss_pred Cchh------------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHH-hCCEEEEcccccCccHHHHHHHHhCC
Confidence 9976 67899999999999999999942 46788888 49999999999999999999999999
Q ss_pred cEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 691 PTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 691 PVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
|||+|+.||..|+|.+|.+|++++++|++++++++..+ ..+..+...+..|+++|++++.+ +|||+.++++|++
T Consensus 498 PVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e-----~FS~e~Mv~~y~k 571 (578)
T PRK15490 498 PVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQE-----RFTVEHMVGTFVK 571 (578)
T ss_pred CEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHH
Confidence 99999999999999999999999999999998877432 33445556667899999999999 9999999999999
Q ss_pred HHHH
Q 003492 771 LAGV 774 (816)
Q Consensus 771 ly~~ 774 (816)
+|..
T Consensus 572 i~~~ 575 (578)
T PRK15490 572 TIAS 575 (578)
T ss_pred HHHh
Confidence 9863
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=1.7e-35 Score=330.23 Aligned_cols=287 Identities=20% Similarity=0.197 Sum_probs=212.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHH
Q 003492 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (816)
..+|||||+|++....+ ...++..++|++.+.|+..... ....|+. ....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~~-------------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWDF-------------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHHH-------------HHHHHHhCCEEeecHHH
Confidence 45899999998875332 2223334899999999743211 1111211 12356789998888844
Q ss_pred HHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCC--CCchHHHHHhhhhccchhhccCcccccc
Q 003492 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF--PYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (816)
Q Consensus 485 ~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~--p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (816)
.+. .+++ ..++ +||||+|..... +........ .++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~~----------------~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIEY----------------ILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHHH----------------HHH
Confidence 322 1222 3455 999999975322 222111110 012
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (816)
.+|+ ++++++|+++||+++.||++.+++|+..+.+..++++|+|+|+|+.. +++ ..+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~---~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPE---GWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cch---hHHHHHHHHHHhCCCCC
Confidence 3555 56789999999999999999999999999887789999999999651 111 12334555556778889
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHH
Q 003492 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722 (816)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA 722 (816)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++||||||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998421 36788888888 59999999999999999999999999999999999999999999999987 567888
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
++|.+++ .|++.+++|+++|++.+.+ +|||+.++++|+++|+.
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~-----~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRE-----NFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHH-----HcCHHHHHHHHHHHHHh
Confidence 8886554 8999999999999999988 89999999999999864
No 32
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.2e-35 Score=323.65 Aligned_cols=347 Identities=19% Similarity=0.233 Sum_probs=259.0
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccc
Q 003492 300 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (816)
Q Consensus 300 ~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~ 379 (816)
..||.+.++. +|+++|+++||+|. +++...+. ....+ ..+++++++++...+
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~------~~~~~----~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRL------VAELE----AEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCch------HHHHH----hcCCeEEEccccccc------
Confidence 3599999999 77778899999998 88753111 11111 124556666654321
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhh
Q 003492 380 ISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (816)
Q Consensus 380 isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y 459 (816)
.+..+ .+...+.+.+. +.+||+||+|+....+.+.++++..++|++++.|+...... .
T Consensus 60 -----~~~~~-~~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------~- 117 (355)
T cd03819 60 -----PLRIL-LNVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------------R- 117 (355)
T ss_pred -----hhhhH-HHHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------------H-
Confidence 11111 11222333333 34899999999888888888888889999999997643110 0
Q ss_pred hchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchH
Q 003492 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (816)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~ 539 (816)
....+..+|.++++|+...+...+ ..|++ ..++.+||||+|...|.+....
T Consensus 118 --------~~~~~~~~~~vi~~s~~~~~~~~~-------------------~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 118 --------YNAIMARGDRVIAVSNFIADHIRE-------------------NYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred --------HHHHHHhcCEEEEeCHHHHHHHHH-------------------hcCCC--hhhEEEecCCccccccCccccc
Confidence 113467899999999877653221 12332 5689999999999888654322
Q ss_pred HHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCc
Q 003492 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (816)
Q Consensus 540 ~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~ 619 (816)
...... .++.++. ++++++++++||+.+.||++.+++++.++.+..++++|+|+|++..
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~----- 227 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG----- 227 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc-----
Confidence 111100 0112333 4567899999999999999999999999988778999999999875
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECC-CCCCCcHHHHHHHHcCCcEEEcCcc
Q 003492 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHG 698 (816)
Q Consensus 620 d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS-~~EgFGltvlEAMA~GlPVIaT~~g 698 (816)
.....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 228 ---RRFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ---cchHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 11234556678888899899999994 4578889985 99999999 7999999999999999999999999
Q ss_pred ccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHH
Q 003492 699 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIY 764 (816)
Q Consensus 699 G~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~ 764 (816)
|..|++.++.+|++++++|+++++++|...+ ..|++.+.+++++|++.+.+ +|+|+.+
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~-----~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVET-----LFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHH-----hhhhccC
Confidence 9999999999999999999999999996544 36899999999999999999 9999863
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=1.2e-34 Score=314.93 Aligned_cols=373 Identities=18% Similarity=0.212 Sum_probs=262.8
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6899987654 56799999999 77778899999999 887553221100 0000
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~--~lva~lla~~~gip~v~t~ 437 (816)
+.......... .. ......................+||+||+|.... ...+...++..++|++++.
T Consensus 52 -~~~~~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINV--AY---------GLNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccch--hh---------hhhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 00000000000 00 0000000000011111222245899999998433 4566667778899999999
Q ss_pred cCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCC
Q 003492 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (816)
Q Consensus 438 H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f 517 (816)
|+........ ...+... ...+..+...++.++.++++|......... +. .
T Consensus 120 ~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~---------------------~~--~ 169 (375)
T cd03821 120 HGMLDPWALP-HKALKKR------LAWFLFERRLLQAAAAVHATSEQEAAEIRR---------------------LG--L 169 (375)
T ss_pred cccccccccc-cchhhhH------HHHHHHHHHHHhcCCEEEECCHHHHHHHHh---------------------hC--C
Confidence 9864322110 0011110 111123456778899999998766542110 11 2
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHh
Q 003492 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (816)
Q Consensus 518 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (816)
..++.++|||+|.+.+.+......+ ..++. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 5689999999999888664432211 11233 56788999999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCC
Q 003492 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (816)
Q Consensus 598 ~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~Eg 677 (816)
.+.+++++|+++|.+.. .+...++.+++++++.++|.|+| .++.+++..+++. ||++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCC
Confidence 98889999999998765 23455666678899999999999 6777899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 003492 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIIC 757 (816)
Q Consensus 678 FGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~ 757 (816)
||++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~----- 362 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEE----- 362 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH-----
Confidence 99999999999999999999999999998 78998865 5699999996655 8999999999999999888
Q ss_pred CCCHHHHHHHHHH
Q 003492 758 RYTWKIYSERLMT 770 (816)
Q Consensus 758 ~ytw~~~a~~ll~ 770 (816)
+|||+.+++++++
T Consensus 363 ~~s~~~~~~~~~~ 375 (375)
T cd03821 363 RFSWTAIAQQLLE 375 (375)
T ss_pred hcCHHHHHHHhhC
Confidence 9999999998863
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=6.5e-34 Score=311.18 Aligned_cols=272 Identities=21% Similarity=0.307 Sum_probs=224.2
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCH
Q 003492 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (816)
Q Consensus 405 ~~kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (816)
..+||+||+|+... ...+.+.++..++|++++.|+......... ..+...++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCH
Confidence 45899999998755 445555555568999999997532211100 123456789999999999
Q ss_pred HHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccc
Q 003492 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (816)
Q Consensus 484 ~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (816)
...+..++.. |.+ ..++.++|||+|.+.|.+...
T Consensus 140 ~~~~~l~~~~-------------------~~~--~~~~~vi~~~~d~~~~~~~~~------------------------- 173 (355)
T cd03799 140 YNRQQLIRLL-------------------GCD--PDKIHVVHCGVDLERFPPRPP------------------------- 173 (355)
T ss_pred HHHHHHHHhc-------------------CCC--cccEEEEeCCcCHHHcCCccc-------------------------
Confidence 8766332211 222 568999999999877655320
Q ss_pred cCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003492 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 643 (816)
. ...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. .+.+.+.++++++.++|
T Consensus 174 ~---~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 174 P---PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred c---ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 0 03456789999999999999999999999988788999999999977 56788889999999999
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEECCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCC
Q 003492 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH 717 (816)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~------EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d 717 (816)
+|+| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..+++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 6778899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHH
Q 003492 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERL 768 (816)
Q Consensus 718 ~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~l 768 (816)
+++++++|.+++ .|++.+.+++++|++.+.+ +|||+..++++
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~-----~~s~~~~~~~l 355 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEE-----EFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH-----hcCHHHHhhcC
Confidence 999999997765 7999999999999999999 99999998763
No 35
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=7.6e-34 Score=308.93 Aligned_cols=333 Identities=15% Similarity=0.157 Sum_probs=238.7
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g 358 (816)
|||+++++..+|- +.|..||.++++. +|++.|.++||+|. +++...+.... ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999866541 3467899999999 77777899999999 88865322100 00
Q ss_pred CCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003492 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 359 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H 438 (816)
......+... ...............+.+.+. ..+|||||+|.+..... +++..++|++++.|
T Consensus 54 ---~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLRL---------DAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCccc---------ccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0111101000 000000011112222222222 45899999999887655 56778999999999
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
+....... + ........+.++++|....... .. .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~~------------------------~~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRPW------------------------PP--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhhc------------------------cc--c
Confidence 76432210 0 0124567788889887765410 01 1
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.+||||+|.+.|.+. ..+++.|+++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999877541 2345689999999999999999999764
Q ss_pred ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEEEeccccCcCChHHHHHHHHccccEEEECCC-CC
Q 003492 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YE 676 (816)
Q Consensus 599 ~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~-L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~-~E 676 (816)
.+++|+|+|++.. ...+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233444444443 568999999 6777899999995 999999997 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhccc
Q 003492 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIII 756 (816)
Q Consensus 677 gFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~ 756 (816)
+||++++||||||+|||+|+.||..|++.++.+|+++++ +++++++|.++. .++ .+++++++.+
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~---- 319 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAER---- 319 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHH----
Confidence 999999999999999999999999999999999999985 999999996653 332 2467788888
Q ss_pred CCCCHHHHHHHHHHHHH
Q 003492 757 CRYTWKIYSERLMTLAG 773 (816)
Q Consensus 757 ~~ytw~~~a~~ll~ly~ 773 (816)
+|||+.++++|+++|+
T Consensus 320 -~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 320 -RFSAARMVDDYLALYR 335 (335)
T ss_pred -hCCHHHHHHHHHHHhC
Confidence 9999999999999984
No 36
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.1e-33 Score=308.36 Aligned_cols=363 Identities=19% Similarity=0.262 Sum_probs=260.3
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++... |..||.+.++. .|+++|+++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899987654 45689999999 77888899999999 888653221110 00
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H 438 (816)
....+...+......+ +.... ....+.+.+. ..+||+||++.... ++.+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eeccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222222211110 00000 0111222222 34899999987654 56677888889999999999
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
+......... ........ . ........+.+|.+++.|....+... ... .
T Consensus 116 ~~~~~~~~~~--~~~~~~~~---~--~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GLGPLSWL---A--WAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhc--ccchHhHh---h--HHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 7543111000 00000000 0 11234567889999999988754110 011 4
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.+++||+|.+.|.|......... .++ +.+++.|+++||+.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~~------------------~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALRA------------------RLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHHH------------------HhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 57889999999988876543222111 122 345678999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCC
Q 003492 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (816)
Q Consensus 599 ~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgF 678 (816)
+. ++++|+|+|+++. ...++ +..++|.|+| .++.+++..+++. +|+++.||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 77 8999999999876 22222 4567899999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCC
Q 003492 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICR 758 (816)
Q Consensus 679 GltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ 758 (816)
|++++|||+||+|||+++.|+..|++.++.+|+++++.|.++++++|.+++ .||+.++++++++++.+ + +
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~-----~ 349 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-E-----R 349 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-h-----h
Confidence 999999999999999999999999999999999999999999999996655 89999999999999999 4 6
Q ss_pred CCHHHHHHHHHHHHH
Q 003492 759 YTWKIYSERLMTLAG 773 (816)
Q Consensus 759 ytw~~~a~~ll~ly~ 773 (816)
|+|+.++++++++|+
T Consensus 350 ~~~~~~~~~~~~~~~ 364 (364)
T cd03814 350 RSWEAFLDNLLEAYR 364 (364)
T ss_pred cCHHHHHHHHHHhhC
Confidence 999999999999873
No 37
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=1.7e-33 Score=306.92 Aligned_cols=387 Identities=18% Similarity=0.261 Sum_probs=272.5
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||++++.+.. |..||...++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899997665 33489999999 77777899999999 8876533221111000 011122
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~--~lva~lla~~~gip~v~t~ 437 (816)
.++.+.+++...... ..++.+ +..+ ..|.......+.. ...+||+||++++.. ...+..+++..++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 357777776654321 000000 1111 1222222222221 256899999998432 4556666777799999999
Q ss_pred cCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCC
Q 003492 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (816)
Q Consensus 438 H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f 517 (816)
|+.............. ....+.+.. ..+...++.+|.++++|....+... ..+++
T Consensus 132 h~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKN-GSLLYRLLR--KLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCccc-cchHHHHHH--HHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 9865432111000000 000001111 2355678899999999988766321 11222
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHh
Q 003492 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (816)
Q Consensus 518 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (816)
..++.++|||+|...+.+......+ ...+. ..+++.|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 5789999999998777654432211 01111 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCC
Q 003492 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (816)
Q Consensus 598 ~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~Eg 677 (816)
.+. ++++|+++|++.. .+.+.+.+...++ ++|.++| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 877 8999999999876 4566666666666 5799999 6778899999995 999999999886
Q ss_pred C-----cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 678 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 678 F-----GltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 888999999999999999999999999989999999999999999997665 8999999999999999998
Q ss_pred hcccCCCCHHHHHHHHH
Q 003492 753 RIIICRYTWKIYSERLM 769 (816)
Q Consensus 753 ~~~~~~ytw~~~a~~ll 769 (816)
+|||+.++++|+
T Consensus 383 -----~~s~~~~~~~~~ 394 (394)
T cd03794 383 -----KFSREKLAERLL 394 (394)
T ss_pred -----hhcHHHHHHhcC
Confidence 899999998863
No 38
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=4.1e-33 Score=299.95 Aligned_cols=373 Identities=22% Similarity=0.345 Sum_probs=272.4
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++... |..||...++. .|++.|.+.||+|. +++.......... ....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~------~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEE------EVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCcee------eecC-
Confidence 6899987654 23689999999 77777899999999 8876633321110 0000
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 439 (816)
......+... ..........+.......+. ..+||+||++++.........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00011111112222222222 34899999999887666557788889999999998
Q ss_pred CCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCC
Q 003492 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (816)
Q Consensus 440 l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ 519 (816)
......... . ... .......+...++.+|.+++.|....+...+. .+.. ..
T Consensus 118 ~~~~~~~~~---~-~~~----~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE---L-GLL----LKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc---h-hHH----HHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 755332211 0 000 00111234567889999999998876532211 1111 35
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhc
Q 003492 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (816)
Q Consensus 520 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (816)
++.++|||+|...+.+.. ...+. .... ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~~-------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAARR-------------------RLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHHh-------------------hcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876643 11110 0111 4567889999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCc
Q 003492 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (816)
Q Consensus 600 ~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFG 679 (816)
..++++|+++|++.. ...+++.+++++..++|.|+| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 888999999997755 667778888889999999999 6777899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 003492 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRY 759 (816)
Q Consensus 680 ltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~y 759 (816)
++++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.+++ .|++.+.++++++++.+.+ .|
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~-----~~ 360 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAE-----RF 360 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHH-----hc
Confidence 99999999999999999999999999999999999999999999996655 8999999999999988888 99
Q ss_pred CHHHHHHHHHHHH
Q 003492 760 TWKIYSERLMTLA 772 (816)
Q Consensus 760 tw~~~a~~ll~ly 772 (816)
||+.+++++.++|
T Consensus 361 ~~~~~~~~~~~~~ 373 (374)
T cd03801 361 SWDRVAARTEEVY 373 (374)
T ss_pred CHHHHHHHHHHhh
Confidence 9999999999976
No 39
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.6e-33 Score=307.04 Aligned_cols=358 Identities=17% Similarity=0.246 Sum_probs=254.3
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||++++++. ..||.+.++. +|++.|+++||+|+ +++..... ..... ..
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~-~~~~~-------~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGES-EVKPP-------ID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCC-Cccch-------hh-
Confidence 577776543 2599999999 77778899999999 88754211 10000 00
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H 438 (816)
......++.... .+.++.. ...+.+.+. +.+||+||+|...+++.+.++++.. ++|++.+.|
T Consensus 49 -~~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~---~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSKN------------PLSFLLA-LWKLRKILR---QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEeccccc------------chhhHHH-HHHHHHHHH---hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 011112222110 1111111 111222222 3489999999988777666665543 678899999
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
+..... ... .+. .......++.++++|....+...+ ..+++ .
T Consensus 112 ~~~~~~------~~~------~~~-----~~~~~~~~~~~~~~s~~~~~~~~~-------------------~~~~~--~ 153 (360)
T cd04951 112 SKNEGG------RLR------MLA-----YRLTDFLSDLTTNVSKEALDYFIA-------------------SKAFN--A 153 (360)
T ss_pred ccCchh------HHH------HHH-----HHHHhhccCceEEEcHHHHHHHHh-------------------ccCCC--c
Confidence 754211 000 000 112334567777778766542111 11122 5
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.+||||+|...|.+......... +.++. ++++++++++||+.+.||++.+++++.++.
T Consensus 154 ~~~~~i~ng~~~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 154 NKSFVVYNGIDTDRFRKDPARRLKIR-----------------NALGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred ccEEEEccccchhhcCcchHHHHHHH-----------------HHcCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 68999999999988766543222211 22444 466789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCC
Q 003492 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (816)
Q Consensus 599 ~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgF 678 (816)
+..|+++|+|+|+|+. .+.+++.++++++.++|.|+|.+ +++..+++. ||++|+||..|+|
T Consensus 215 ~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~ 275 (360)
T cd04951 215 SDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGF 275 (360)
T ss_pred hhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEEEeccc------ccHHHHHHh-hceEEecccccCC
Confidence 8888999999999986 56788888889998999999943 357788884 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCC
Q 003492 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICR 758 (816)
Q Consensus 679 GltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ 758 (816)
|++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|.++++ .+++.+..++++ ++.+.+ +
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~~-----~ 344 (360)
T cd04951 276 GLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILK---MSGEERDIIGAR-RERIVK-----K 344 (360)
T ss_pred ChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHHHHH-HHHHHH-----h
Confidence 9999999999999999999999999977 8999999999999999977652 577777777777 888888 8
Q ss_pred CCHHHHHHHHHHHHH
Q 003492 759 YTWKIYSERLMTLAG 773 (816)
Q Consensus 759 ytw~~~a~~ll~ly~ 773 (816)
|||+.++++|+++|+
T Consensus 345 ~s~~~~~~~~~~~y~ 359 (360)
T cd04951 345 FSINSIVQQWLTLYT 359 (360)
T ss_pred cCHHHHHHHHHHHhh
Confidence 999999999999985
No 40
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.9e-33 Score=307.75 Aligned_cols=354 Identities=19% Similarity=0.241 Sum_probs=256.2
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++........ ... .
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~~---~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGR------DEE---R 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcch------hhh---c
Confidence 6899997665 45799999999 77778899999999 88765322211 011 1
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 439 (816)
.+..+.+++..... ...+....+ ...+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNV----------ASTPFSPSF----FKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeeccccc----------ccccccHHH----HHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 13345555432210 011111111 11111 2255899999998765333333333368899999996
Q ss_pred CCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCC
Q 003492 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (816)
Q Consensus 440 l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ 519 (816)
..... ...+ ..+. ..+...++.+|.++++|....+..... .....
T Consensus 116 ~~~~~----~~~~----~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~~----------------------~~~~~ 160 (357)
T cd03795 116 DIVKQ----KLLL----KLYR-----PLQRRFLRRADAIVATSPNYAETSPVL----------------------RRFRD 160 (357)
T ss_pred hhhcc----chhh----hhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHHh----------------------cCCcc
Confidence 32111 0011 1111 123457889999999998765421110 11136
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhc
Q 003492 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (816)
Q Consensus 520 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (816)
++.+||||+|.+.+.+....... .... +.+++.|+++||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEEA--------------------IWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhhH--------------------hhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 78999999999877654322110 0111 456789999999999999999999999886
Q ss_pred cCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCC--CCC
Q 003492 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEA 677 (816)
Q Consensus 600 ~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~Eg 677 (816)
+++|+|+|+|+. ...+.+.+++.+..++|.|+| .++..++..+++. ||++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 799999999876 567788888899999999999 7778899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCcccccccccc-CCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhccc
Q 003492 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIII 756 (816)
Q Consensus 678 FGltvlEAMA~GlPVIaT~~gG~~EiI~d-g~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~ 756 (816)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.+
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~---- 349 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEE---- 349 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999886 89999999999999999996665 8999999999999999999
Q ss_pred CCCCHHHHH
Q 003492 757 CRYTWKIYS 765 (816)
Q Consensus 757 ~~ytw~~~a 765 (816)
+|||+.++
T Consensus 350 -~~s~~~~~ 357 (357)
T cd03795 350 -EFTADRMV 357 (357)
T ss_pred -hcchHhhC
Confidence 99999864
No 41
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=8.3e-35 Score=335.97 Aligned_cols=292 Identities=19% Similarity=0.255 Sum_probs=232.2
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccC----CCChhhhhhhhhh-hhchhhhhHHHHHHhhCCEEE
Q 003492 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKY----PDSDIYWKKFDEK-YHFSCQFTADLIAMNNADFII 479 (816)
Q Consensus 406 ~kPDIIh~h~~~-~~lva~lla~~~gip~v~t~H~l~~~k~----~~~~~~~~~~~~~-y~f~~~~~~e~~a~~~AD~II 479 (816)
.++|+||+|... .++++.+++++.|+|++++.|+...... ...++........ .++. ...+..+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEEE
Confidence 478999999753 4688888999999999999998643110 0000000000000 0111 123556889999999
Q ss_pred ecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccc
Q 003492 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (816)
Q Consensus 480 t~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (816)
++|....+.. ...|++ ..|+.+||||+|.+.|.+....
T Consensus 250 ~~s~~~~~~~--------------------~~~g~~--~~ki~vIpNgid~~~f~~~~~~-------------------- 287 (475)
T cd03813 250 TLYEGNRERQ--------------------IEDGAD--PEKIRVIPNGIDPERFAPARRA-------------------- 287 (475)
T ss_pred ecCHHHHHHH--------------------HHcCCC--HHHeEEeCCCcCHHHcCCcccc--------------------
Confidence 9998765421 112333 5699999999999888664321
Q ss_pred cccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003492 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (816)
Q Consensus 560 ~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 639 (816)
+. +.++++|+++||+.+.||++.+++|+..+.+..|+++|+|+|+++. ..++.++++++++++++
T Consensus 288 -----~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~l 352 (475)
T cd03813 288 -----RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLGL 352 (475)
T ss_pred -----cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhCC
Confidence 00 3567899999999999999999999999988889999999999853 12456788999999999
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CCeEEEE
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GASGFHI 713 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d------g~~G~li 713 (816)
.++|+|+| . .++..+++ .+|++|+||..|+||++++||||||+|||+|+.||..|++.+ |.+|+++
T Consensus 353 ~~~V~f~G----~---~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv 424 (475)
T cd03813 353 EDNVKFTG----F---QNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV 424 (475)
T ss_pred CCeEEEcC----C---ccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE
Confidence 99999999 2 34667777 499999999999999999999999999999999999999998 6799999
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 714 ~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
+++|+++++++|.+++ +|++.+++++++|++++.+ .|+|+.++++|.++|+
T Consensus 425 ~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~-----~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 PPADPEALARAILRLL----KDPELRRAMGEAGRKRVER-----YYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHhC
Confidence 9999999999996655 8999999999999999999 9999999999999984
No 42
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.6e-33 Score=304.90 Aligned_cols=363 Identities=17% Similarity=0.181 Sum_probs=264.7
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++-.. .||.+.++. .|++.|++.|++|. +++...... .......
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~----~~~~~~~---- 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGE----LGEELEE---- 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchh----hhHHHHh----
Confidence 5777775432 389999999 77778899999998 777542211 1111111
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~-~gip~v~t~H 438 (816)
.++.+..++.... ...+. +...+.+.+. +.+||+||++.......+.+.++. .++|++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~~----~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDPG----ALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccHH----HHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2455665554321 01111 1122223333 348999999987776766666666 6899999999
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
....... .|. ...+. .......+.+|.++++|....+.... .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~~~-----~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLVA-----RLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhHHH-----HHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8654321 011 01111 11334566789989999877552111 1333 5
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.++|||+|...|.+........ ++.+++ ++++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 6899999999998776654322211 122454 566788999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCC
Q 003492 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (816)
Q Consensus 599 ~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~Eg 677 (816)
+..++++|+++|.+.. ......... ++++.++|.|+|.+ +++..+++. +|++|+||.+|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 334444454 78888999999832 457788885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 003492 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIIC 757 (816)
Q Consensus 678 FGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~ 757 (816)
||++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++.+.+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~----- 349 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEE----- 349 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH-----
Confidence 99999999999999999999999999977 899999999999999997665 7999999999999999999
Q ss_pred CCCHHHHHHHHHHHHH
Q 003492 758 RYTWKIYSERLMTLAG 773 (816)
Q Consensus 758 ~ytw~~~a~~ll~ly~ 773 (816)
+|||+..++++.++|+
T Consensus 350 ~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 350 NFSIEAMVEAYEELYR 365 (365)
T ss_pred hCCHHHHHHHHHHHhC
Confidence 9999999999999874
No 43
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=3.3e-33 Score=304.12 Aligned_cols=371 Identities=19% Similarity=0.272 Sum_probs=264.8
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||++++...+ |..||...++. .|+++|+++||+|+ ++|...+...... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6899986644 66899999999 78888899999999 8886643321110 00
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H 438 (816)
.+....+.+.... ......+. +...+...+. ..+||+||+|+... +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFKY-------PDFRLPLP----IPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccchh-------hhhhcccc----HHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 0111111111100 00000111 1111111122 35899999998654 56677788889999999999
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhh-hHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQF-TADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~-~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f 517 (816)
+....... . ............. ..+...++.+|.+++.|....+...+ .+.
T Consensus 117 ~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~--------------------~~~--- 168 (374)
T cd03817 117 TMYEDYTH-Y----VPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE--------------------YGV--- 168 (374)
T ss_pred CCHHHHHH-H----HhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh--------------------cCC---
Confidence 76431100 0 0000000000000 23556788999999999876542111 122
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHh
Q 003492 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (816)
Q Consensus 518 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (816)
..++.++|||+|...+.+......+ ..++. +.+++.|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999888765432221 11233 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCC
Q 003492 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (816)
Q Consensus 598 ~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~Eg 677 (816)
.+..++++|+++|+++. .+.++++++++++.++|.|+| .++.+++..+++. +|++++|+..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccC
Confidence 87778999999999876 567888888999999999999 6778899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 003492 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIIC 757 (816)
Q Consensus 678 FGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~ 757 (816)
+|++++|||+||+|||+|+.|+..|++.++.+|+++++.+. +++++|.+++ +|++.+++|++++++.+.+
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~----- 360 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEK----- 360 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH-----
Confidence 99999999999999999999999999999999999998887 8888886554 8999999999999999986
Q ss_pred CCCHHHHHHHHHHHHHH
Q 003492 758 RYTWKIYSERLMTLAGV 774 (816)
Q Consensus 758 ~ytw~~~a~~ll~ly~~ 774 (816)
++ .++++.++|+.
T Consensus 361 -~~---~~~~~~~~~~~ 373 (374)
T cd03817 361 -FS---FAKKVEKLYEE 373 (374)
T ss_pred -HH---HHHHHHHHHhc
Confidence 44 66777776653
No 44
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=8.4e-33 Score=301.95 Aligned_cols=358 Identities=16% Similarity=0.190 Sum_probs=250.9
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||++|++.. |..||.+.++. +|+++|.+.||+|. +++...+........ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998642 44799999999 77778899999998 776543221110000 00
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc---hHHH---HHHHHHcCCcE
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG---NLVA---SLLAYKMGITQ 433 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~---~lva---~lla~~~gip~ 433 (816)
....... ......+ ..+.+.+. ..+||+||++.+.+ .... ....+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~~~-----~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPLDY-----RRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCchhH-----HHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0001101 11222222 34899999987432 1222 22223479999
Q ss_pred EEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecC
Q 003492 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (816)
Q Consensus 434 v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~G 513 (816)
+.+.|+..... ...+ ........++.+|.|+++|...... ..
T Consensus 109 i~~~h~~~~~~----~~~~-----------~~~~~~~~~~~~d~ii~~s~~~~~~---~~-------------------- 150 (366)
T cd03822 109 VVTLHTVLLHE----PRPG-----------DRALLRLLLRRADAVIVMSSELLRA---LL-------------------- 150 (366)
T ss_pred EEEEecCCccc----cchh-----------hhHHHHHHHhcCCEEEEeeHHHHHH---HH--------------------
Confidence 99999861100 0000 0011335678999999997333221 10
Q ss_pred CCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHH
Q 003492 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (816)
Q Consensus 514 i~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (816)
......++.++|||+|...+.+..... . .+. ..++++|+++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~-~---------------------~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLK-A---------------------LGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhH-h---------------------hcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 000146899999999987665532210 0 111 4567899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECC
Q 003492 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (816)
Q Consensus 594 ~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS 673 (816)
+.++.+..++++|+|+|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~-------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE-------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh-------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 999998888999999999865100 001111145788899999999982 3778899999996 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003492 674 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (816)
Q Consensus 674 ~~E--gFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~ 751 (816)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77778888999999999999999996655 899999999999999998
Q ss_pred hhcccCCCCHHHHHHHHHHHHH
Q 003492 752 ERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 752 ~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
+ |||+.+++++.++|+
T Consensus 351 ~------~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A------MSWERVAERYLRLLA 366 (366)
T ss_pred h------CCHHHHHHHHHHHhC
Confidence 5 999999999999873
No 45
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.4e-33 Score=309.81 Aligned_cols=347 Identities=15% Similarity=0.174 Sum_probs=248.6
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++.. ..||.+.++. +++++|.+.||+|+ +++...... ....... .
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~~----~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEIE----K 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHHH----H
Confidence 688887643 3699999999 66677788999999 887552221 0111111 1
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~-v~t~H 438 (816)
.++.+++++.... ..+ .+...+.+.+. ..+||+||+|+.....++.++++..+.|. +...|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2455665543321 111 12222222222 35899999999887677777777778776 45667
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
.............+. ...+....+.+|.++++|....+..... + ..
T Consensus 113 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------------------~--~~ 158 (358)
T cd03812 113 NTSDSHDKKKKILKY-----------KVLRKLINRLATDYLACSEEAGKWLFGK---------------------V--KN 158 (358)
T ss_pred cccccccccchhhHH-----------HHHHHHHHhcCCEEEEcCHHHHHHHHhC---------------------C--Cc
Confidence 643322111110000 1123456788999999998876521110 1 15
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.+||||+|.+.|.+........ ...+. ..+++.|+|+||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKKR------------------RELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhHH------------------HHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 6899999999998876643322111 11222 467789999999999999999999999999
Q ss_pred ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCC
Q 003492 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (816)
Q Consensus 599 ~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgF 678 (816)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. ||++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999876 5678888889999999999994 3467888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 679 GltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
|++++||||||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.++.++..+......
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLDA 348 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccchh
Confidence 9999999999999999999999999998 4677777778999999996655 8999999888777766544
No 46
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=3.8e-33 Score=316.60 Aligned_cols=372 Identities=13% Similarity=0.113 Sum_probs=241.3
Q ss_pred CcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCC-CceeecceEEecccCCCCC-CccC----
Q 003492 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG-LDISPKILIVTRLIPDAKG-TTCN---- 350 (816)
Q Consensus 277 ~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~G-heV~~~i~VvT~~~p~~~~-~~~~---- 350 (816)
+.|||+|++..+. |..+|..+.++ .++..|+++| |+|+ |+.+..+.... ..+.
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 4599999997665 67899999999 7777899999 7999 99876543211 0000
Q ss_pred --ccc--e-eecCCCceEEEEecCCCcccccccccc--cccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc-hHH-
Q 003492 351 --QRL--E-RVSGTEHTHILRVPFRSEKGILRQWIS--RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLV- 421 (816)
Q Consensus 351 --~~~--e-~v~g~~~v~I~rvp~~~~~~~~~~~is--r~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~lv- 421 (816)
... + .+....+.++.++|..+...+-. +.+ +..+++ ..++.+.+.+ .+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~yp~-r~~~~~r~~~~-----~~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKFYPG-KFSTDKRSILP-----VGDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccccCcc-cccccccccCC-----hHHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 000 0 01111122444544332211000 000 011111 1233344433 4899999999875 565
Q ss_pred -HHHHHHHcCCcEEEEecCCCcccCCC-Chh-hhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhccccccccc
Q 003492 422 -ASLLAYKMGITQCTIAHALEKTKYPD-SDI-YWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYES 498 (816)
Q Consensus 422 -a~lla~~~gip~v~t~H~l~~~k~~~-~~~-~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~ 498 (816)
+..++++.++ +|.+.|+-.. .|.. ... ..... ...+...+ ..-..+|.+++.|....+ .
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~~~--l~~~~~~~----~~r~~~d~vi~pS~~~~~-l--------- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVKAF--LLKYINSW----VVDIYCHKVIRLSAATQD-Y--------- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHHHH--HHHHHHHH----HHHHhcCEEEccCHHHHH-H---------
Confidence 6667777765 8889998321 1110 000 00000 00011111 111248999999975432 0
Q ss_pred ccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEE
Q 003492 499 HTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSM 578 (816)
Q Consensus 499 ~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~v 578 (816)
.......++|||.+.|.|........ .. ..+.-.+.++|+
T Consensus 195 -------------------~~~~i~~v~GVd~~~f~~~~~~~~~~--------------------~~-~~~~~~~~~l~v 234 (462)
T PLN02846 195 -------------------PRSIICNVHGVNPKFLEIGKLKLEQQ--------------------KN-GEQAFTKGAYYI 234 (462)
T ss_pred -------------------hhCEEecCceechhhcCCCcccHhhh--------------------cC-CCCCcceEEEEE
Confidence 11232345899999887754321100 11 001113568999
Q ss_pred eccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHH
Q 003492 579 ARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 658 (816)
Q Consensus 579 GRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el 658 (816)
||+.+.||++.|++|+.++.+..++++|+|+|+|++ .++++++++++++..++ |.| ..+.++
T Consensus 235 GRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G----~~~~~~- 296 (462)
T PLN02846 235 GKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPG----RDHADP- 296 (462)
T ss_pred ecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECC----CCCHHH-
Confidence 999999999999999999987778999999999998 77899999999986555 777 333333
Q ss_pred HHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHH
Q 003492 659 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSH 738 (816)
Q Consensus 659 ~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~ 738 (816)
+++ .+|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++
T Consensus 297 --~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~-- 365 (462)
T PLN02846 297 --LFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP-- 365 (462)
T ss_pred --HHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc--
Confidence 555 58999999999999999999999999999999998 59999999999995 89999999987662 233
Q ss_pred HHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 739 WKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 739 ~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
..++.+++ + .|||+..+++++++|+.=
T Consensus 366 -~~~~~~a~----~-----~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 366 -APLTDAQR----H-----ELSWEAATERFLRVADLD 392 (462)
T ss_pred -hhHHHHHH----H-----hCCHHHHHHHHHHHhccC
Confidence 23333322 3 699999999999998765
No 47
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.3e-33 Score=314.04 Aligned_cols=348 Identities=16% Similarity=0.216 Sum_probs=239.6
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHC--CCceeecceEEecccCCCCCCccCccceee
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~--GheV~~~i~VvT~~~p~~~~~~~~~~~e~v 356 (816)
|||+++++. + |..||++.++. ++++.|.++ ||+|. ++++..+... ......
T Consensus 1 mkI~~~~~~-~---------~~~GG~e~~~~--------~l~~~L~~~~~g~~v~----v~~~~~~~~~-----~~~~~~ 53 (359)
T PRK09922 1 MKIAFIGEA-V---------SGFGGMETVIS--------NVINTFEESKINCEMF----FFCRNDKMDK-----AWLKEI 53 (359)
T ss_pred CeeEEeccc-c---------cCCCchhHHHH--------HHHHHhhhcCcceeEE----EEecCCCCCh-----HHHHhc
Confidence 799999864 2 34699999999 777778899 77777 7775432110 000000
Q ss_pred cCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcE--E
Q 003492 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ--C 434 (816)
Q Consensus 357 ~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~--v 434 (816)
.-.......++++. ... .....+.+.+. +.+||+||+|.....+.+.++++..++|. +
T Consensus 54 ~~~~~~~~~~~~~~----------~~~-------~~~~~l~~~l~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T PRK09922 54 KYAQSFSNIKLSFL----------RRA-------KHVYNFSKWLK---ETQPDIVICIDVISCLYANKARKKSGKQFKIF 113 (359)
T ss_pred chhcccccchhhhh----------ccc-------HHHHHHHHHHH---hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEE
Confidence 00000000011100 000 11112223332 34899999998776677777777777654 4
Q ss_pred EEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCC
Q 003492 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (816)
Q Consensus 435 ~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi 514 (816)
.+.|...... . .+ ....+..+|.++++|....+... ..|+
T Consensus 114 ~~~h~~~~~~--------~----~~--------~~~~~~~~d~~i~~S~~~~~~~~--------------------~~~~ 153 (359)
T PRK09922 114 SWPHFSLDHK--------K----HA--------ECKKITCADYHLAISSGIKEQMM--------------------ARGI 153 (359)
T ss_pred EEecCccccc--------c----hh--------hhhhhhcCCEEEEcCHHHHHHHH--------------------HcCC
Confidence 4455321100 0 00 00123689999999987755221 1244
Q ss_pred CCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccC--CCCCHHHHHH
Q 003492 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD--HVKNMTGLVE 592 (816)
Q Consensus 515 ~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~--~~Kgl~~Lie 592 (816)
+ ..++.+||||+|.+.+..... ...+++.|+++||+. +.||+..+++
T Consensus 154 ~--~~ki~vi~N~id~~~~~~~~~-----------------------------~~~~~~~i~~~Grl~~~~~k~~~~l~~ 202 (359)
T PRK09922 154 S--AQRISVIYNPVEIKTIIIPPP-----------------------------ERDKPAVFLYVGRLKFEGQKNVKELFD 202 (359)
T ss_pred C--HHHEEEEcCCCCHHHccCCCc-----------------------------ccCCCcEEEEEEEEecccCcCHHHHHH
Confidence 3 568999999999654432110 023467899999996 4699999999
Q ss_pred HHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEEC
Q 003492 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (816)
Q Consensus 593 A~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~P 672 (816)
++.++. ++++|+|+|+|+. .+.++++++++++.++|.|+|++.+ +.+++..+++. +|++|+|
T Consensus 203 a~~~~~---~~~~l~ivG~g~~------------~~~l~~~~~~~~l~~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~ 264 (359)
T PRK09922 203 GLSQTT---GEWQLHIIGDGSD------------FEKCKAYSRELGIEQRIIWHGWQSQ--PWEVVQQKIKN-VSALLLT 264 (359)
T ss_pred HHHhhC---CCeEEEEEeCCcc------------HHHHHHHHHHcCCCCeEEEecccCC--cHHHHHHHHhc-CcEEEEC
Confidence 998874 3799999999987 6778999999999999999996543 34678888885 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003492 673 AFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (816)
Q Consensus 673 S~~EgFGltvlEAMA~GlPVIaT~-~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~ 751 (816)
|.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++++|+++++++|.+++ +|++.+ +..+.....
T Consensus 265 s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~----~~~~~~---~~~~~~~~~ 337 (359)
T PRK09922 265 SKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVI----SGEVKY---QHDAIPNSI 337 (359)
T ss_pred CcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHH----hCcccC---CHHHHHHHH
Confidence 999999999999999999999999 899999999999999999999999999997665 788754 122322333
Q ss_pred hhcccCCCCHHHHHHHHHHHHHH
Q 003492 752 ERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 752 ~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
. +|+-+.+.+++..+|..
T Consensus 338 ~-----~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 338 E-----RFYEVLYFKNLNNALFS 355 (359)
T ss_pred H-----HhhHHHHHHHHHHHHHH
Confidence 3 58888999999888753
No 48
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=1.3e-32 Score=312.52 Aligned_cols=391 Identities=14% Similarity=0.070 Sum_probs=256.7
Q ss_pred CCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCcccee
Q 003492 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (816)
Q Consensus 276 p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 355 (816)
|...||++++.- . +|.+..+. +++++|+++||+|+ |+|...+.. .+.
T Consensus 1 ~~~~~~~~~~~~-~------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~ 47 (415)
T cd03816 1 PKRKRVCVLVLG-D------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDE 47 (415)
T ss_pred CCccEEEEEEec-c------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHH
Confidence 445688888752 2 35566667 67888899999999 888653211 011
Q ss_pred ecCCCceEEEEecCCC-cccccccccccccchhhHHHHHH---HHHHHHHHHhCCCceEEEEcCCCc---hHHHHHHHHH
Q 003492 356 VSGTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTE---DVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYK 428 (816)
Q Consensus 356 v~g~~~v~I~rvp~~~-~~~~~~~~isr~~i~~yl~~f~~---~~~~~i~~~l~~kPDIIh~h~~~~---~lva~lla~~ 428 (816)
.....++.+++++... ..+.. .....+...... .+...+.. ..+||+||+|.+.. ...+.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNKL------PFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCccccccc------hHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 1112367888877654 11100 111112111111 11111222 34799999987554 3456667777
Q ss_pred cCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccce
Q 003492 429 MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLY 508 (816)
Q Consensus 429 ~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~ 508 (816)
.++|+|++.|+........ . .........+.. ..+...++.+|.||++|....+...+
T Consensus 120 ~~~~~V~~~h~~~~~~~~~-~--~~~~~~~~~~~~--~~e~~~~~~ad~ii~vS~~~~~~l~~----------------- 177 (415)
T cd03816 120 RRTKLIIDWHNYGYTILAL-K--LGENHPLVRLAK--WYEKLFGRLADYNLCVTKAMKEDLQQ----------------- 177 (415)
T ss_pred hCCeEEEEcCCchHHHHhc-c--cCCCCHHHHHHH--HHHHHHhhcCCEeeecCHHHHHHHHh-----------------
Confidence 8999999999864211100 0 000000011111 13566788999999999987653211
Q ss_pred eeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcc-ccccccCCCCCCCCcEEEEEeccCCCCCH
Q 003492 509 RVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE-QNDEHVGTLSDRSKPIVFSMARLDHVKNM 587 (816)
Q Consensus 509 ~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~-~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl 587 (816)
.|++ ..|+.|||||. ...|.|.......... ... ..-+++. ......+.. +++..+++++||+.+.||+
T Consensus 178 ---~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~ 247 (415)
T cd03816 178 ---FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELF-LKL--AKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDF 247 (415)
T ss_pred ---hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHH-Hhc--cccccccccccccceec-CCCceEEEEeccccCCCCH
Confidence 2333 67999999994 4667765432211100 000 0000000 000011221 2345678899999999999
Q ss_pred HHHHHHHHHhhc------cCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHH
Q 003492 588 TGLVECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRY 661 (816)
Q Consensus 588 ~~LieA~~~l~~------~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ 661 (816)
+.|++|+..+.+ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..+
T Consensus 248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~ 311 (415)
T cd03816 248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKL 311 (415)
T ss_pred HHHHHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHH
Confidence 999999999864 347899999999987 678999999999976445556 6778999999
Q ss_pred HHccccEEEECC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCC---
Q 003492 662 IADTKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN--- 735 (816)
Q Consensus 662 la~aaDvfV~PS---~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~d--- 735 (816)
++ ++|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +|
T Consensus 312 l~-~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~ 384 (415)
T cd03816 312 LA-SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPN 384 (415)
T ss_pred HH-hCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCC
Confidence 99 499999753 25889999999999999999999999999999999999994 8999999997655 77
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHH
Q 003492 736 PSHWKKISDGGLKRIYERIIICRYTWKIYSERLM 769 (816)
Q Consensus 736 p~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll 769 (816)
|+.+++|+++|++.++ ++|+..-.+.+
T Consensus 385 ~~~~~~m~~~~~~~~~-------~~~~~~~~~~~ 411 (415)
T cd03816 385 RGKLNSLKKGAQEESE-------LRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHHhhh-------cCHHHHHHHHh
Confidence 9999999999999984 67776555543
No 49
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=4.8e-33 Score=305.53 Aligned_cols=343 Identities=17% Similarity=0.224 Sum_probs=245.8
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g 358 (816)
|||++++... ..||.+.++. .++++|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999998532 2589999999 67777899999999 8864310
Q ss_pred CCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHc--CCcEEEE
Q 003492 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM--GITQCTI 436 (816)
Q Consensus 359 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~--gip~v~t 436 (816)
. +.+.+. ..+|||||+|++..+.+......+. ++|.+++
T Consensus 42 ------------~------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------A------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------h------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 001111 2389999999877655444444444 9999999
Q ss_pred ecCCCcccCC----CChhhh-hh-----hhhhhh---chhhhh-HHHHHH-hhCCEEEecCHHHHhhhcccccccccccc
Q 003492 437 AHALEKTKYP----DSDIYW-KK-----FDEKYH---FSCQFT-ADLIAM-NNADFIITSTYQEIAGTKNTVGQYESHTA 501 (816)
Q Consensus 437 ~H~l~~~k~~----~~~~~~-~~-----~~~~y~---f~~~~~-~e~~a~-~~AD~IIt~S~~~~~~~k~~~~qy~~~~~ 501 (816)
+|+....... .....+ .. ....+. ...+.. .....+ ..++.++++|....+..++.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 9986432110 000000 00 000000 000100 011112 45677888886654422111
Q ss_pred cccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEecc
Q 003492 502 FTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL 581 (816)
Q Consensus 502 ~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL 581 (816)
..++ ..++.++|||+|.+.|.|......+ +.+++ +++++++++.|+.
T Consensus 154 ----------~~~~--~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ----------SLFK--GIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ----------cccC--CCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 0122 5689999999999988765443221 12344 4556777777776
Q ss_pred CC--CCCHHHHHHHHHHhhcc-CCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCC-hHH
Q 003492 582 DH--VKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR-NGE 657 (816)
Q Consensus 582 ~~--~Kgl~~LieA~~~l~~~-~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~-~~e 657 (816)
.. .||++.+++++..+.+. .++++++++|++.. ... .++.++|.|+| .++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~------------~~~-------~~~~~~v~~~g----~~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDP------------EIP-------PDLPFPVHYLG----SLNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCch------------hhh-------ccCCCceEecC----CcCCHHH
Confidence 65 89999999999998765 57899999999865 111 14567899999 555 678
Q ss_pred HHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHH
Q 003492 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (816)
Q Consensus 658 l~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~ 737 (816)
+..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 8889984 9999999999999999999999999999999999999999999999999999999999997665 7999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 738 HWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 738 ~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
.+.++++++++.+.+ +|||+.++++|+++|+.
T Consensus 333 ~~~~~~~~~~~~~~~-----~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 333 EREELGEAARELAEN-----EFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHhh
Confidence 999999999999998 89999999999999863
No 50
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=2.7e-32 Score=292.85 Aligned_cols=345 Identities=17% Similarity=0.231 Sum_probs=250.6
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++... + .||.+.++. +|+++|+++||+|+ +++....+ .. . .. ..
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~--~~----~-~~--~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGE--PP----F-YE--LD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCC--CC----c-cc--cC
Confidence 6888886543 2 689999999 77777899999999 88765332 00 0 00 11
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCC-cEEEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGI-TQCTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gi-p~v~t~H 438 (816)
.++.+..++...... +. ..+ .+...+.+.+. ..+||+||++++. ....+.....+. |++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~~---~~~----~~~~~~~~~l~---~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----LL---ARF----KKLRRLRKLLK---NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----hh---ccc----cchHHHHHhhc---ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 234555544332110 00 000 01112222222 2589999999877 222233333444 9999999
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
........ ...+. ..+...++.+|.+++.|...... + .....
T Consensus 114 ~~~~~~~~--~~~~~------------~~~~~~~~~~d~ii~~s~~~~~~-------~-----------------~~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRRL------------LLRRLLYRRADAVVVLTEEDRAL-------Y-----------------YKKFN 155 (348)
T ss_pred CCccchhh--hhHHH------------HHHHHHHhcCCEEEEeCHHHHHH-------h-----------------hccCC
Confidence 75432110 00000 02456788999999999876410 0 01125
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999997654432 0345778999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCC
Q 003492 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (816)
Q Consensus 599 ~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgF 678 (816)
+..++++|+|+|++.. ...+.++++++++.++|.+.|. .+++..+++. ||+++.||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8889999999999877 5667778899999999999993 4678889985 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 003492 679 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIIC 757 (816)
Q Consensus 679 GltvlEAMA~GlPVIaT~~g-G~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~ 757 (816)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ +||+.+++|++++++.++
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~~------ 335 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESAE------ 335 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHH------
Confidence 99999999999999999875 5677887878999999999999999997665 899999999999977665
Q ss_pred CCCHHHHHHHHH
Q 003492 758 RYTWKIYSERLM 769 (816)
Q Consensus 758 ~ytw~~~a~~ll 769 (816)
+|+|+.++++|.
T Consensus 336 ~~~~~~~~~~~~ 347 (348)
T cd03820 336 RFSIENIIKQWE 347 (348)
T ss_pred HhCHHHHHHHhc
Confidence 699999999885
No 51
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.4e-32 Score=311.19 Aligned_cols=278 Identities=16% Similarity=0.106 Sum_probs=191.6
Q ss_pred CCCceEEEEcCCCch---HHHH------HHHHHcCCcEEEEecCCCccc----CCCChhhhhhhhh---h---h-----h
Q 003492 405 QGFPDFIIGNYSDGN---LVAS------LLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFDE---K---Y-----H 460 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~---lva~------lla~~~gip~v~t~H~l~~~k----~~~~~~~~~~~~~---~---y-----~ 460 (816)
..+|||||.|...++ +... +..+..++|+|.|.|+.+... ++..-..|+.-.. . | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 458999999998863 3211 112345799999999976432 1111111211110 0 0 0
Q ss_pred -----chhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCC
Q 003492 461 -----FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535 (816)
Q Consensus 461 -----f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p 535 (816)
|......-....+.++.+|++|...++.... ... ..++.+||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~---------------------~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS---------------------LYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH---------------------HcC--CCCEEEeCCCcCcccccc
Confidence 0011000111234578899999876652211 011 358999999999754332
Q ss_pred CchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEecc--CCCCCHHHHHHHHHHhhccCCCeEEEEEeccC
Q 003492 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL--DHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 613 (816)
Q Consensus 536 ~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL--~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~ 613 (816)
...... ... .+++++|+++|+. .+.||+..+++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~----------------------~~~--~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VRE--TQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------ccc--CCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 211100 000 2456789999994 47899999999998763 579999999875
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEE
Q 003492 614 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 693 (816)
Q Consensus 614 ~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVI 693 (816)
. . ..++|.++|... +..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~------------~-----------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 P------------F-----------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred c------------c-----------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 4 0 024688888543 35678888884 9999999999999999999999999999
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHH----HHHHHHHHHHhhcccCCCCHHHHHHHHH
Q 003492 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK----ISDGGLKRIYERIIICRYTWKIYSERLM 769 (816)
Q Consensus 694 aT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~----ms~~ar~~~~~~~~~~~ytw~~~a~~ll 769 (816)
+|+.||++|++.++ +|++++|+|++++|+.+ +++..++ +.+++++++.+ +|||+.++++|+
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~-----~fs~~~~~~~y~ 399 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRA-----AYSGQQMLEEYV 399 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHH-----hCCHHHHHHHHH
Confidence 99999999999875 99999999999999754 4444443 34568899888 899999999999
Q ss_pred HHHHH
Q 003492 770 TLAGV 774 (816)
Q Consensus 770 ~ly~~ 774 (816)
++|+.
T Consensus 400 ~lY~~ 404 (405)
T PRK10125 400 NFYQN 404 (405)
T ss_pred HHHHh
Confidence 99963
No 52
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=6.6e-32 Score=291.16 Aligned_cols=356 Identities=18% Similarity=0.246 Sum_probs=257.8
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++. .||...++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57888754 378888988 77778899999999 8876532211 0111
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHH-HcCCcEEEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~-~~gip~v~t~H 438 (816)
.++.++.+|..... .+ .+..+. ....+.+.+. +.+||+||+|...+.+.+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~~-~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDLK-ALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHHH-HHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 25667776655310 11 111111 1112222222 35899999998877777777777 44566777888
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
+......... ... ..+ ...+...++.+|.+++.|....+...+. .+.+ ..
T Consensus 113 ~~~~~~~~~~-~~~----~~~-----~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSGG-LKR----RLY-----LLLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhccch-hHH----HHH-----HHHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 7543321111 011 111 1124567788999999998876522111 1111 13
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.+++||+|.+.+.+.... .+.+++.|+++||+.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 567788999998766543210 0346789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHH-HHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCC
Q 003492 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (816)
Q Consensus 599 ~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~-li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~Eg 677 (816)
+.+++++|+|+|++.. ...... ++.+.+..++|.|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDE------------ENPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCc------------chhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 8788999999999876 111111 3667778889999994 3468888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccC
Q 003492 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIIC 757 (816)
Q Consensus 678 FGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~ 757 (816)
||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+++ .|++.+.++++++++.+.+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~----- 346 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEE----- 346 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH-----
Confidence 9999999999999999999999999999999999999999999999996654 8999999999999999888
Q ss_pred CCCHHHHHHHHH
Q 003492 758 RYTWKIYSERLM 769 (816)
Q Consensus 758 ~ytw~~~a~~ll 769 (816)
+|+|+.++++++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 999999999886
No 53
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.6e-32 Score=299.61 Aligned_cols=365 Identities=20% Similarity=0.238 Sum_probs=255.9
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||++++.+..++ ..||++.|+. +|+++|++.||+|+ +++............ ..
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hh--
Confidence 688888665521 5799999999 77778899999998 776553222111000 00
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 439 (816)
.... .... .....+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---cccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0000 001111111111111111111 35899999999876444 5679999999998
Q ss_pred CCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCC
Q 003492 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (816)
Q Consensus 440 l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ 519 (816)
+.....+.....+ .... ........++.+|.++++|....+...+. .+++ ..
T Consensus 113 ~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG--FRRY-----FRRLLRRALRRADAIITVSEATKRDLLRY-------------------LGVP--PD 164 (365)
T ss_pred chhhhCcccCCHH--HHHH-----HHHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCcC--HH
Confidence 7554433211111 0000 11224567899999999998776532211 1111 46
Q ss_pred cEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhc
Q 003492 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (816)
Q Consensus 520 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (816)
++.++|||+|...+.+..... +.. ... ..+++.|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~~-------------------~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VLR-------------------ALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HHH-------------------Hhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998876654332 110 111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCc
Q 003492 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (816)
Q Consensus 600 ~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFG 679 (816)
..++++|+++|++... .......+++.++.++|.|+| .++.+++..+++. +|+++.||.+|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 8778999999987651 112222336778889999999 7778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCC
Q 003492 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRY 759 (816)
Q Consensus 680 ltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~y 759 (816)
++++|||++|+|||+|+.|+..|++. .+|++++++|+++++++|.+++ .|++.+.++++++++.+. +|
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~------~~ 354 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARAK------RF 354 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHH------hC
Confidence 99999999999999999999999994 4799999999999999996654 899999999999997665 69
Q ss_pred CHHHHHHHHHH
Q 003492 760 TWKIYSERLMT 770 (816)
Q Consensus 760 tw~~~a~~ll~ 770 (816)
||+..++++++
T Consensus 355 sw~~~~~~~~~ 365 (365)
T cd03809 355 SWEKTARRTLD 365 (365)
T ss_pred CHHHHHHHHhC
Confidence 99999998863
No 54
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=1.9e-31 Score=288.53 Aligned_cols=284 Identities=26% Similarity=0.418 Sum_probs=231.8
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCH
Q 003492 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (816)
Q Consensus 405 ~~kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (816)
..+||+||+|+... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|.
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 45899999997654 5667777888899999999986543322111 011123457889999999998
Q ss_pred HHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccc
Q 003492 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (816)
Q Consensus 484 ~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (816)
...+...+. + ....++.++|||+|...+.+...... . .
T Consensus 158 ~~~~~~~~~--------------------~--~~~~~~~~i~~~~~~~~~~~~~~~~~--~------------------~ 195 (377)
T cd03798 158 ALADELKAL--------------------G--IDPEKVTVIPNGVDTERFSPADRAEA--R------------------K 195 (377)
T ss_pred HHHHHHHHh--------------------c--CCCCceEEcCCCcCcccCCCcchHHH--H------------------h
Confidence 876632211 1 12678999999999988876543221 0 0
Q ss_pred cCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003492 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 643 (816)
.+. ..+++.++++|++.+.||++.+++++..+.+..++++|+++|.+.. ...+.+.++++++.++|
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~------------~~~~~~~~~~~~~~~~v 261 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL------------REALEALAAELGLEDRV 261 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc------------hHHHHHHHHhcCCcceE
Confidence 121 4567889999999999999999999999988788999999999876 56777888889999999
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHH
Q 003492 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAE 723 (816)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~ 723 (816)
.+.| .++.+++..+++. ||++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|++++++|++++++
T Consensus 262 ~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 336 (377)
T cd03798 262 TFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAE 336 (377)
T ss_pred EEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHH
Confidence 9999 7788999999995 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 724 LMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
+|.+++ +++.. +++.++++.+.+ +|+|+..++++.++|+
T Consensus 337 ~i~~~~----~~~~~--~~~~~~~~~~~~-----~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 337 AILRLL----ADPWL--RLGRAARRRVAE-----RFSWENVAERLLELYR 375 (377)
T ss_pred HHHHHh----cCcHH--HHhHHHHHHHHH-----HhhHHHHHHHHHHHHh
Confidence 997665 78876 788899999998 9999999999999875
No 55
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=6.1e-32 Score=307.35 Aligned_cols=377 Identities=18% Similarity=0.204 Sum_probs=245.9
Q ss_pred EEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHC--CCceeecceEEecccCCCCCCcc--Cccceee
Q 003492 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTC--NQRLERV 356 (816)
Q Consensus 281 Ilivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~--GheV~~~i~VvT~~~p~~~~~~~--~~~~e~v 356 (816)
|+++.|+.- ..||.++.+++-|++| .++ ||+|+ |+|........... ......+
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f~~ 60 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRFNI 60 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhcCe
Confidence 566666543 2469999999666665 555 88998 99987433210000 0001111
Q ss_pred cCCCceEEEEec-CCCcccccccccccccchhh---HHHHHHHHHHHHHHHhCCCceEEEEcCCCc--hHHHHHHHHHcC
Q 003492 357 SGTEHTHILRVP-FRSEKGILRQWISRFDVWPY---LETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMG 430 (816)
Q Consensus 357 ~g~~~v~I~rvp-~~~~~~~~~~~isr~~i~~y---l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~--~lva~lla~~~g 430 (816)
.-.+++.++++. .+ .|+++ ..|+. +..+...+...+....+.+||||+.+...+ ..++.+ ..+
T Consensus 61 ~~~~~~~~~~~~~~~-------~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~---~~~ 129 (419)
T cd03806 61 ELDRPRIVFFLLKYR-------KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRL---LGG 129 (419)
T ss_pred ecCCCceEEEEecce-------eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHH---hcC
Confidence 111234444442 11 12221 22222 123333333333332244899999887444 222222 237
Q ss_pred CcEEEEecCCCcccCCCCh--hhhh----------------hhh-hhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcc
Q 003492 431 ITQCTIAHALEKTKYPDSD--IYWK----------------KFD-EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKN 491 (816)
Q Consensus 431 ip~v~t~H~l~~~k~~~~~--~~~~----------------~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~ 491 (816)
+|++..+|- +....+.- ...+ ... ..|+. .....+..+++.||.|+++|....+..++
T Consensus 130 ~~~i~y~h~--P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~-~~~~~~~~~~~~aD~ii~~S~~~~~~~~~ 206 (419)
T cd03806 130 CPVGAYVHY--PTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYR-LFAFLYGLAGSFADVVMVNSTWTRNHIRS 206 (419)
T ss_pred CeEEEEecC--CcchHHHHHHHhhccccccCccchhccchHHHHHHHHHH-HHHHHHHHHhhcCCEEEECCHHHHHHHHH
Confidence 899999993 21000000 0000 000 01110 00124667889999999999877653222
Q ss_pred cccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCC
Q 003492 492 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (816)
Q Consensus 492 ~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~ 571 (816)
.. +. ..++.||+||+|++.|.+.... ...+
T Consensus 207 ~~-------------------~~---~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~ 236 (419)
T cd03806 207 LW-------------------KR---NTKPSIVYPPCDVEELLKLPLD----------------------------EKTR 236 (419)
T ss_pred Hh-------------------Cc---CCCcEEEcCCCCHHHhcccccc----------------------------cccC
Confidence 10 11 2478999999998766543210 0245
Q ss_pred CcEEEEEeccCCCCCHHHHHHHHHHhhccCC-----CeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003492 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p-----~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 646 (816)
+++|+|+||+.+.||++.+++|+.++.+..| +++|+|+|++.. .+..++.+.++++++++++.++|.|+
T Consensus 237 ~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~------~~~~~~~~~L~~~~~~l~l~~~V~f~ 310 (419)
T cd03806 237 ENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN------EDDEKRVEDLKLLAKELGLEDKVEFV 310 (419)
T ss_pred CcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC------cccHHHHHHHHHHHHHhCCCCeEEEe
Confidence 6799999999999999999999999987655 499999999754 12234677889999999999999999
Q ss_pred ccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCCeEEEECCCCHHHHH
Q 003492 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIE---HGASGFHIDPYHPDQAA 722 (816)
Q Consensus 647 G~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~-~EiI~---dg~~G~li~p~d~~~lA 722 (816)
| .++.+++..+|+. ||++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |++++|
T Consensus 311 g----~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la 383 (419)
T cd03806 311 V----NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYA 383 (419)
T ss_pred c----CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHH
Confidence 9 7888999999995 99999999999999999999999999999999886 57887 899999985 999999
Q ss_pred HHHHHHHHhhcCCH-HHHHHHHHHHHHHHHhhcccCCCCHHHHHH
Q 003492 723 ELMADFFGKCKENP-SHWKKISDGGLKRIYERIIICRYTWKIYSE 766 (816)
Q Consensus 723 ~~I~~~l~~l~~dp-~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~ 766 (816)
++|.+++ +++ +.++.+ .++++.+.+ +|||+.+.+
T Consensus 384 ~ai~~ll----~~~~~~~~~~-~~~~~~~~~-----~fs~~~f~~ 418 (419)
T cd03806 384 EAIEKIL----SLSEEERLRI-RRAARSSVK-----RFSDEEFER 418 (419)
T ss_pred HHHHHHH----hCCHHHHHHH-HHHHHHHHH-----hhCHHHhcc
Confidence 9997766 554 445555 555555667 899998754
No 56
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=1e-31 Score=291.62 Aligned_cols=353 Identities=16% Similarity=0.204 Sum_probs=244.7
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||++++++..+ ..+||.+.++. .|+++|+++||+|+ +++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999976543 23699999999 67777899999999 887653222111000
Q ss_pred CceEEEEecC--CCcccccccccccccchhhH-HHHHHHHHHHHHHHhCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003492 360 EHTHILRVPF--RSEKGILRQWISRFDVWPYL-ETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (816)
Q Consensus 360 ~~v~I~rvp~--~~~~~~~~~~isr~~i~~yl-~~f~~~~~~~i~~~l~~kPDIIh~h~~~~-~lva~lla~~~gip~v~ 435 (816)
.+..+...+. ........ .......+. ..+...+.+.+. ..+||+||+|.... .......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPR---DLFHLSDYDNPAVVAEFARLLE---DFRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCchh---hhhHHHhccCHHHHHHHHHHHH---HcCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111110 00000000 000000000 111122222222 24899999998754 33445566778999999
Q ss_pred EecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCC
Q 003492 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (816)
Q Consensus 436 t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~ 515 (816)
+.|+...... +. .......|.++++|....+...+ .+..
T Consensus 126 ~~hd~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~~--------------------~~~~ 164 (359)
T cd03823 126 TLHDYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYVA--------------------NGLF 164 (359)
T ss_pred EEeeeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHHH--------------------cCCC
Confidence 9997542110 00 01112339999999877552221 1221
Q ss_pred CCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHH
Q 003492 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (816)
Q Consensus 516 ~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (816)
..++.+++||+|...+.+... +. +.++++|+++||+.+.||++.+++++.
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHH
Confidence 458999999999877654321 01 356778999999999999999999999
Q ss_pred HhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCC-
Q 003492 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF- 674 (816)
Q Consensus 596 ~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~- 674 (816)
++.+ ++++|+++|++.. ........ +..++|.++| .++.+++..+++. +|++++||.
T Consensus 215 ~l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~ 272 (359)
T cd03823 215 RLPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIW 272 (359)
T ss_pred HHHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcc
Confidence 9876 7899999999876 11111111 5668899999 6778999999995 999999997
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhc
Q 003492 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERI 754 (816)
Q Consensus 675 ~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~ 754 (816)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.++++++++++...
T Consensus 273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~--- 345 (359)
T cd03823 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRS--- 345 (359)
T ss_pred cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhh---
Confidence 7999999999999999999999999999999999999999999999999997665 799999999998877653
Q ss_pred ccCCCCHHHHHHHHHHHHH
Q 003492 755 IICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 755 ~~~~ytw~~~a~~ll~ly~ 773 (816)
.+.++++++++|+
T Consensus 346 ------~~~~~~~~~~~~~ 358 (359)
T cd03823 346 ------IEDQAEEYLKLYR 358 (359)
T ss_pred ------HHHHHHHHHHHhh
Confidence 3999999999875
No 57
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.4e-31 Score=304.99 Aligned_cols=235 Identities=17% Similarity=0.224 Sum_probs=189.9
Q ss_pred HHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhh
Q 003492 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (816)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~ 547 (816)
+..+.+.||.|+|+|....+..++.. +. ..++.+++||+|.+.+.+...
T Consensus 214 ~~~~~~~ad~ii~nS~~t~~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~--------- 262 (463)
T PLN02949 214 YGLVGRCAHLAMVNSSWTKSHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPL--------- 262 (463)
T ss_pred HHHHcCCCCEEEECCHHHHHHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCc---------
Confidence 45567899999999988765332210 11 347889999999765522110
Q ss_pred ccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhc----cCCCeEEEEEeccCCCCCCcchHH
Q 003492 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVNLVVVAGYIDVNKSKDREE 623 (816)
Q Consensus 548 ~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~----~~p~v~LvIVG~g~~~~~~~d~e~ 623 (816)
. .+.+++.++++||+.+.||++.+++|+.++.+ ..++++|+|+|++.. .+.
T Consensus 263 -----------------~--~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~ 317 (463)
T PLN02949 263 -----------------E--RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KED 317 (463)
T ss_pred -----------------c--ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------ccc
Confidence 0 02345789999999999999999999998754 347899999999853 122
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc-c
Q 003492 624 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-E 702 (816)
Q Consensus 624 ~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~-E 702 (816)
.++.++++++++++++.++|.|+| .++.+++..+++. |+++|.|+..|+||++++|||+||+|||+++.||+. |
T Consensus 318 ~~~~~eL~~la~~l~L~~~V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~e 392 (463)
T PLN02949 318 EERLQKLKDRAKELGLDGDVEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMD 392 (463)
T ss_pred HHHHHHHHHHHHHcCCCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcce
Confidence 345678899999999999999999 6778899999995 999999999999999999999999999999999985 7
Q ss_pred cccc---CCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 703 IIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 703 iI~d---g~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
++.+ |.+|++++ |++++|++|.++++ .+++.+++|+++|++++. +|||+.+++++.+.++.
T Consensus 393 IV~~~~~g~tG~l~~--~~~~la~ai~~ll~---~~~~~r~~m~~~ar~~~~------~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 393 IVLDEDGQQTGFLAT--TVEEYADAILEVLR---MRETERLEIAAAARKRAN------RFSEQRFNEDFKDAIRP 456 (463)
T ss_pred eeecCCCCcccccCC--CHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH------HcCHHHHHHHHHHHHHH
Confidence 7765 67899885 99999999977652 368889999999999995 69999999999998753
No 58
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=3.6e-31 Score=284.24 Aligned_cols=351 Identities=18% Similarity=0.222 Sum_probs=248.3
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCC
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~ 359 (816)
||+++++... .||...++. +|+++|.++||+|. +++............ ...
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP------SNV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc------cch
Confidence 6888886442 589999999 77778899999999 887553222111000 000
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEec
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~-~~~lva~lla~~~gip~v~t~H 438 (816)
........... ....+ .+...+.+.+.. .+||+||+++. ...+.+.+.++. ++|.+.+.|
T Consensus 52 ~~~~~~~~~~~-----------~~~~~----~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLK-----------SLRDL----LAILRLRRLLRK---EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeecc-----------cccch----hHHHHHHHHHHh---cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 00000000000 00111 111222222322 38999999998 455555554444 899999999
Q ss_pred CCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC
Q 003492 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (816)
Q Consensus 439 ~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~ 518 (816)
+............+ ..+...++.+|.+++.|....+...+. .+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcC--Cc
Confidence 86543321111000 124457889999999998765522211 111 14
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765432211 0121 456789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCC
Q 003492 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (816)
Q Consensus 599 ~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgF 678 (816)
+..++++|+++|+++. .+.+.++++++++.++|.|.|.. +++..+++. +|++|+||.+|++
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCC
Confidence 8788999999999876 56677889999999999999942 246778885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCC
Q 003492 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICR 758 (816)
Q Consensus 679 GltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ 758 (816)
|++++|||+||+|||+|+.||..|++.++.+|++++++|++++++.+..+ ..+..+++.++++++++++.+.+ +
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~-----~ 350 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAR-----E 350 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHH-----H
Confidence 99999999999999999999999999999999999999999996444433 56779999999999988988888 7
Q ss_pred CC
Q 003492 759 YT 760 (816)
Q Consensus 759 yt 760 (816)
|+
T Consensus 351 ~~ 352 (353)
T cd03811 351 YS 352 (353)
T ss_pred hc
Confidence 75
No 59
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=5.6e-32 Score=305.01 Aligned_cols=284 Identities=14% Similarity=0.153 Sum_probs=203.9
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCCcccCCCCh--hhhhhhhhhhhch--hhhhHHHHHHhhCCEEE
Q 003492 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDSD--IYWKKFDEKYHFS--CQFTADLIAMNNADFII 479 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~lva~lla-~~~gip~v~t~H~l~~~k~~~~~--~~~~~~~~~y~f~--~~~~~e~~a~~~AD~II 479 (816)
..++|+||++++... ..+. +..++|.+++.|+.+...+.... ..+ .....|+.. .....|...++.+|.|+
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi 177 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRW-PLRWIYRREGRLLLAYERAIAARFDAAT 177 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 358999999876542 2222 34689999999986432111000 000 000011110 01124677889999999
Q ss_pred ecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccc
Q 003492 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (816)
Q Consensus 480 t~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (816)
++|+.+.+..++. .+. ...++.+||||+|.+.|.|.....
T Consensus 178 ~~S~~~~~~l~~~-------------------~~~--~~~~v~vipngvd~~~f~~~~~~~------------------- 217 (397)
T TIGR03087 178 FVSRAEAELFRRL-------------------APE--AAGRITAFPNGVDADFFSPDRDYP------------------- 217 (397)
T ss_pred EcCHHHHHHHHHh-------------------CCC--CCCCeEEeecccchhhcCCCcccc-------------------
Confidence 9999887632211 011 145899999999998886642110
Q ss_pred cccccCCCCCCCCcEEEEEeccCCCCCHHHHH----HHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHH
Q 003492 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (816)
Q Consensus 560 ~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (816)
... ..++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +.+ +
T Consensus 218 ----~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~~----~ 274 (397)
T TIGR03087 218 ----NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PAV----R 274 (397)
T ss_pred ----CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HHH----H
Confidence 011 24567899999999999999988 56666777779999999999875 122 3
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEEC
Q 003492 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 714 (816)
Q Consensus 636 ~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~-~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~ 714 (816)
+++..++|+|+|. ++ ++..+++. +|++|+||. .||+|++++||||||+|||+|+.|+. .+...+.+|++++
T Consensus 275 ~l~~~~~V~~~G~----v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~ 346 (397)
T TIGR03087 275 ALAALPGVTVTGS----VA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA 346 (397)
T ss_pred HhccCCCeEEeee----cC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC
Confidence 3344578999994 33 46788885 999999997 59999999999999999999997643 3344456799886
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
+|+++++++|.+++ +|++.+++|+++|++++.+ +|||+.+++++.+++.
T Consensus 347 -~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~-----~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 -ADPADFAAAILALL----ANPAEREELGQAARRRVLQ-----HYHWPRNLARLDALLE 395 (397)
T ss_pred -CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHhc
Confidence 89999999996655 8999999999999999998 9999999999999875
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=2.6e-31 Score=307.46 Aligned_cols=280 Identities=19% Similarity=0.224 Sum_probs=210.6
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCC--hhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecC
Q 003492 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS--DIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~--~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (816)
..++||+|++.+.....+ ++.....+|.+.++|+-+....... ...|+. .|.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~---~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNN---YYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHH---HHHH------HHhchhhCCEEEECC
Confidence 458999999776653333 4445568999999998543222111 111221 1111 122356789999999
Q ss_pred HHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccccc
Q 003492 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (816)
Q Consensus 483 ~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (816)
+...+...+..+++ +.. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YNI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cCC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 87655433322222 111 46899999998754433210
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (816)
..++..|+++||+.+.||++.+++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 1234579999999999999999999999998889999999999976 5789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECC----CC
Q 003492 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDP----YH 717 (816)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~g-G~~EiI~dg~~G~li~p----~d 717 (816)
|.|+| ..+ +..+++ .+|++|+||.+||||++++||||||+|||+|+.+ |++|+|.+|.+|+++++ +|
T Consensus 378 V~f~G----~~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKG----HRN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcC----CCC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 99999 333 445556 5999999999999999999999999999999986 89999999999999984 33
Q ss_pred ----HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 718 ----PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 718 ----~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
++++|++|.+++ + ++.+++|+++|++.++ +|||+.++++|.++++.
T Consensus 450 ~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a~------~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 450 EDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIAE------GFLTANIIEKWKKLVRE 499 (500)
T ss_pred hhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHHH------hcCHHHHHHHHHHHHhh
Confidence 777888885543 4 5579999999999886 59999999999998753
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.98 E-value=1.2e-30 Score=295.74 Aligned_cols=276 Identities=15% Similarity=0.238 Sum_probs=218.7
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCc-EEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecC
Q 003492 405 QGFPDFIIGNYSDG-NLVASLLAYKMGIT-QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (816)
Q Consensus 405 ~~kPDIIh~h~~~~-~lva~lla~~~gip-~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (816)
..++|++|+++... +..+.+++++.+.+ ++.++|+..... ......+. ......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46788999866554 45556677777776 899999753211 00011111 11234578999999999
Q ss_pred HHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccccc
Q 003492 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (816)
Q Consensus 483 ~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (816)
....+..++.. +....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~~---------------------~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRY---------------------PAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHC---------------------CCccccEEEEECCcccccccCCC-------------------------
Confidence 98876433221 11256889999999986554320
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCC--CeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p--~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (816)
...+++.|+++||+.+.||++.+++|+.++.+.+| +++++++|+|+. .+.+++++++.+..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 02456789999999999999999999999988776 466788999876 56788888888888
Q ss_pred CcEEEeccccCcCChHHHHHHHHc-cccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCC-CH
Q 003492 641 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY-HP 718 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~-aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~-d~ 718 (816)
++|.|+| .++.+++..+++. .+|+||+||.+||||++++||||||+|||||+.||..|+|.++.+|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 8999999 7778899999874 3789999999999999999999999999999999999999999999999875 89
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHH
Q 003492 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLM 769 (816)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll 769 (816)
++++++|.+++ +||+.+++|+++|++.+++ +|||+...+++.
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~-----~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEE-----NFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH-----HcCHHHhHHHhc
Confidence 99999997665 7999999999999999999 999999998875
No 62
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.8e-29 Score=286.98 Aligned_cols=437 Identities=16% Similarity=0.170 Sum_probs=291.3
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g 358 (816)
|||+.++....| .-++||....+- .|.+.|++.|++|. |+.+.++ .....+....+.+..
T Consensus 1 M~Il~v~~E~~p-------~vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~-~~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFP-------FVKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYP-KVQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecC-------ccccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCch-hhhhhhccccceeeE
Confidence 789999887764 247999999988 66677899999999 8887776 322222222111110
Q ss_pred C-------CceEEEEecCCC--cccc-cc--cccccc--cchh------hHHHHHHHHHHHHHHHhC--CCceEEEEcCC
Q 003492 359 T-------EHTHILRVPFRS--EKGI-LR--QWISRF--DVWP------YLETFTEDVGSEITAELQ--GFPDFIIGNYS 416 (816)
Q Consensus 359 ~-------~~v~I~rvp~~~--~~~~-~~--~~isr~--~i~~------yl~~f~~~~~~~i~~~l~--~kPDIIh~h~~ 416 (816)
. ....+....... ..-+ +. ..-+|. ..+. .+..|...+... ..... .+|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~-~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAEL-APLGLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHH-hhhcCCCCCCCEEEeecH
Confidence 0 001111111100 0000 00 011110 1111 122333333332 22222 37999999999
Q ss_pred CchHHHHHHHHH----cCCcEEEEecCCCcccCCC-Chhhhhhhh-hhh-----hchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 417 DGNLVASLLAYK----MGITQCTIAHALEKTKYPD-SDIYWKKFD-EKY-----HFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 417 ~~~lva~lla~~----~gip~v~t~H~l~~~k~~~-~~~~~~~~~-~~y-----~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
..++++.+++.. ..+|.|+|+|++....... .-..+-.+. ..| .+..+....+..+..||.|+|+|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999984 4799999999986655332 111111111 011 11123344667788999999999988
Q ss_pred HhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccC
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg 565 (816)
+..... ..|. ..+.++.+. ...++.-|-||+|.+.+.|.++......--......+..++....+++|
T Consensus 220 a~Ei~t--~~~g----~gl~g~l~~------~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIYT--PEYG----EGLEGLLSW------RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhcc--cccc----ccchhhhhh------ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 764321 1111 112222111 1357889999999999998765422100000111123445556667889
Q ss_pred CCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003492 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (816)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (816)
+..+.+.|++.++||++.+||++.+++++..+.+.. +++++.|.|.. .....+.++++++.. ++..
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~ 353 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLV 353 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEE
Confidence 876778899999999999999999999999998864 99999999944 567788888888854 4444
Q ss_pred eccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CCeEEEECCCC
Q 003492 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GASGFHIDPYH 717 (816)
Q Consensus 646 lG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d--------g~~G~li~p~d 717 (816)
.- ..+ +.+.+.+...+|++++||++|+||++-++||..|+++|++.+||.++.|.+ ..+||.+.+.+
T Consensus 354 ~i----~~~-~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 354 VI----GYD-EPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred Ee----eec-HHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 43 223 445555544799999999999999999999999999999999999999986 57999999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 718 ~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
+++++.+|..++.-....+..|+.+..++.. . .|+|+..+++|.++|+..
T Consensus 429 ~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~-----d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 429 PDHLANALRRALVLYRAPPLLWRKVQPNAMG---A-----DFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---c-----ccCchhHHHHHHHHHHHH
Confidence 9999999998875444455559999999888 3 799999999999999875
No 63
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=3.3e-29 Score=280.45 Aligned_cols=318 Identities=13% Similarity=0.054 Sum_probs=212.8
Q ss_pred HHHHHHHHCCC-ceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccccccchh---hHHH--
Q 003492 318 EMLLRIKRQGL-DISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP---YLET-- 391 (816)
Q Consensus 318 eLa~~L~~~Gh-eV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~---yl~~-- 391 (816)
+++.+|+++|+ +|+ |+|.. .. + .........+++++++|...... . + ..++. |+..
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~--~~-~-----~~~~~~~~~~v~v~r~~~~~~~~---~-~--~~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYG--GS-E-----PIPALLNHPSIHIHLMVQPRLLQ---R-L--PRVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEec--CC-C-----CCHHHhcCCcEEEEECCCccccc---c-c--ccchHHHHHHHHHH
Confidence 46667788876 799 88743 11 1 11111223469999998621110 0 1 11222 2221
Q ss_pred -HHHHHHHHHHHHhCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhH
Q 003492 392 -FTEDVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTA 467 (816)
Q Consensus 392 -f~~~~~~~i~~~l~~kPDIIh~h~~~~---~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~ 467 (816)
+...+...+.. ...+||+||+|.+.. .+.+.++++..++|++++.|++......... ........+.. ..
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~---~~~~~~~~~~~--~~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSL---GRSHPLVRLYR--WY 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhccc---CCCCHHHHHHH--HH
Confidence 11122222211 146999999987553 4566777888899999999986321100000 00000011111 13
Q ss_pred HHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhh
Q 003492 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (816)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~ 547 (816)
+...++.+|.||++|+...+...+. .|+ ++.+||||+ .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 5678899999999998876632110 122 278999995 456655322100
Q ss_pred ccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh-----------------ccCCCeEEEEEe
Q 003492 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----------------QLRELVNLVVVA 610 (816)
Q Consensus 548 ~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~-----------------~~~p~v~LvIVG 610 (816)
.. .+...+++++||+.+.||++.+++|+..+. +..|+++|+|+|
T Consensus 208 ----------------~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ----------------LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ----------------cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 00 123457889999999999999999998873 235889999999
Q ss_pred ccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECC---CCCCCcHHHHHHHH
Q 003492 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA---FYEAFGLTVVEAMT 687 (816)
Q Consensus 611 ~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS---~~EgFGltvlEAMA 687 (816)
+|+. .++++++++++++.+ +.|.+. .++.+++..+|+. +|++|.|+ ..|+||++++||||
T Consensus 269 ~G~~------------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA 331 (371)
T PLN02275 269 KGPQ------------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFG 331 (371)
T ss_pred CCCC------------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHH
Confidence 9987 678999999999976 887651 4678899999995 99999863 24899999999999
Q ss_pred cCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHH
Q 003492 688 CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (816)
Q Consensus 688 ~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~ 728 (816)
||+|||+|+.||.+|+|+++.+|++++ |++++|++|.++
T Consensus 332 ~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 332 CGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 999999999999999999999999997 799999999653
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=2.7e-29 Score=277.33 Aligned_cols=264 Identities=19% Similarity=0.243 Sum_probs=190.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhh------hhhhhhhhhchhhhhHHHHHHhhCCEE
Q 003492 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIY------WKKFDEKYHFSCQFTADLIAMNNADFI 478 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~------~~~~~~~y~f~~~~~~e~~a~~~AD~I 478 (816)
..++|+||++..... ..+....++|.+..+|+.....+...+.+ +......+........+...++.+|.+
T Consensus 81 ~~~~D~v~~~~~~~~---~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAVA---KGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHHh---ccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 458999998764322 22224567888888886321111100000 000000000011112345668999999
Q ss_pred EecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcc
Q 003492 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (816)
Q Consensus 479 It~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~ 558 (816)
+++|....+...+. . ..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~~---------------------~---~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKKY---------------------Y---GRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHHH---------------------h---CCCcEEECCCCCHhhcCcCC---------------------
Confidence 99999876632211 1 23567899999987665421
Q ss_pred ccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003492 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (816)
Q Consensus 559 ~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (816)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457899999999999999999998763 78999999875 333333 4
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003492 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (816)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~ 718 (816)
..++|+|+| .++.+++..+++. ||++|+||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568999999 7788999999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHH
Q 003492 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERL 768 (816)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~l 768 (816)
++++++|..++ +|++ .+.+++++++. +|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~~------~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHAE------RFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHHH------hcCHHHHHHHh
Confidence 99999997665 6774 33445556665 59999998875
No 65
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=8.3e-29 Score=284.75 Aligned_cols=273 Identities=11% Similarity=0.108 Sum_probs=195.2
Q ss_pred CCCceEEEEcCCCc-hHH--HHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhh--CCEEE
Q 003492 405 QGFPDFIIGNYSDG-NLV--ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN--ADFII 479 (816)
Q Consensus 405 ~~kPDIIh~h~~~~-~lv--a~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~--AD~II 479 (816)
..+|||||.+.+.. ++. |..+|++++ |+|.++|+............+ + . .+..+. .. ..+.. ||.|+
T Consensus 432 ~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~g~--L-~--~~llk~-l~-~~v~r~hcD~VI 503 (794)
T PLN02501 432 SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGA--L-Q--AFFVKH-IN-NWVTRAYCHKVL 503 (794)
T ss_pred ccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcchh--H-H--HHHHHH-HH-HHHHHhhCCEEE
Confidence 35899999999875 777 888999999 899999986542111000000 0 0 000000 00 11222 89999
Q ss_pred ecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccc
Q 003492 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (816)
Q Consensus 480 t~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (816)
++|..... ++ ...+..| ||||++.|.|......+ .
T Consensus 504 aPS~atq~--------------------------L~--~~vI~nV-nGVDte~F~P~~r~~~~-r--------------- 538 (794)
T PLN02501 504 RLSAATQD--------------------------LP--KSVICNV-HGVNPKFLKIGEKVAEE-R--------------- 538 (794)
T ss_pred cCCHHHHH--------------------------hc--ccceeec-ccccccccCCcchhHHH-H---------------
Confidence 99965542 00 1112222 79999999886543322 1
Q ss_pred cccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003492 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (816)
Q Consensus 560 ~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 639 (816)
.+|. +...+.++|+||+.+.||++.|++|++++.+..++++|+|||+|+. .+.+++++.++++
T Consensus 539 ---~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------reeLe~la~eLgL 601 (794)
T PLN02501 539 ---ELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHEVQRAAKRLDL 601 (794)
T ss_pred ---hcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHHHHHHHHHcCC
Confidence 1333 2223458999999999999999999999887778999999999988 6788888998887
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~ 719 (816)
+|.|+|.+.+ ...+|+ ++|+||+||.+|+||++++||||||+|||+|+.+|. +++.++.+|+++ +|++
T Consensus 602 --~V~FLG~~dd------~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~E 669 (794)
T PLN02501 602 --NLNFLKGRDH------ADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSE 669 (794)
T ss_pred --EEEecCCCCC------HHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHH
Confidence 4899994332 235666 599999999999999999999999999999999985 457788888865 6999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
+++++|.+++ .|+..+..+++ .. .|||+..++++++....
T Consensus 670 afAeAI~~LL----sd~~~rl~~~a------~~-----~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 670 DFVAKVKEAL----ANEPQPLTPEQ------RY-----NLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHHHHH----hCchhhhHHHH------Hh-----hCCHHHHHHHHHHhhcc
Confidence 9999997766 66654433321 22 59999999999997644
No 66
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=9.2e-29 Score=274.98 Aligned_cols=273 Identities=21% Similarity=0.267 Sum_probs=211.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCC-hhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHH
Q 003492 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (816)
Q Consensus 406 ~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~-~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (816)
.++|+||++....... .++......+.+.++|+......... ...|+.. +. .....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNF---YE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccchh---hH------HHHhChhhCCEEEEccHH
Confidence 5899999988765433 23344445677888997543221110 1112111 11 011235789999999988
Q ss_pred HHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccccccc
Q 003492 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (816)
Q Consensus 485 ~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 564 (816)
..+...+.. +. ..++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~-------------------~~---~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQF-------------------GN---YNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHh-------------------CC---CCceEEEcccccChhhcccch--------------------------
Confidence 766332211 11 234889999999876654320
Q ss_pred CCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003492 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (816)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (816)
...++..++++||+.+.||++.+++++.++.+..|+++|+|+|.|.. ...+..+++++++.++|.
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 02345689999999999999999999999998889999999999976 456777888999999999
Q ss_pred EeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHHHHHH
Q 003492 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAE 723 (816)
Q Consensus 645 flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~g-G~~EiI~dg~~G~li~p~d~~~lA~ 723 (816)
|.|.. .++..+++. ||++|.||..||||++++|||+||+|||+++.+ |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99932 357778885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHH
Q 003492 724 LMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERL 768 (816)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~l 768 (816)
+|..++ +|++.++++++++++.+. +|||+.++++|
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~~------~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENAE------RYSEENVWEKW 372 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHHH------HhhHHHHHhcC
Confidence 997665 899999999999999965 69999998875
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=1.4e-28 Score=271.11 Aligned_cols=258 Identities=13% Similarity=0.112 Sum_probs=188.4
Q ss_pred EcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHH-HhhCCEEEecCHHHHhhhcc
Q 003492 413 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKN 491 (816)
Q Consensus 413 ~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~ 491 (816)
.|+....+..+...++.|+|+++++|+... +. . ..+... .+.+|.||++|....+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~-------l~-~------------~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA-------IS-H------------TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech-------hh-H------------HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 455555566666666779999999997211 00 0 112234 57899999999887663211
Q ss_pred cccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCC
Q 003492 492 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (816)
Q Consensus 492 ~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~ 571 (816)
.|++. ..++.+||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3589999999998877653210 123
Q ss_pred CcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003492 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (816)
+.+++++|++.+.||++.|++|++++.+..++++++|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4567788899999999999999999988788999999997654 1111 12222 233
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC----------------
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP---------------- 715 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p---------------- 715 (816)
.++.+++..+|+. ||+||+||.+|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5677899999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHhhcCC--HHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 716 ---YHPDQAAELMADFFGKCKEN--PSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 716 ---~d~~~lA~~I~~~l~~l~~d--p~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
.|.+++++++.+++ .| ++.++++..++...+.+ +|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~-----~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRE-----NYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHhcC
Confidence 26788888886655 44 24444444444444556 799999999999999765
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=3.6e-26 Score=261.09 Aligned_cols=331 Identities=16% Similarity=0.158 Sum_probs=203.2
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCCcccCCCC---hhhh-------hhhhhhhhchhhhhHHHHHHh
Q 003492 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDS---DIYW-------KKFDEKYHFSCQFTADLIAMN 473 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~lva~lla-~~~gip~v~t~H~l~~~k~~~~---~~~~-------~~~~~~y~f~~~~~~e~~a~~ 473 (816)
..++||+|+|.|..+..+..++ +..++|.|+|.|+.+...+... +++- ........+..+...|..+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999998888888 4578999999999776554211 1221 011112223334456888999
Q ss_pred hCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhh
Q 003492 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 553 (816)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~ 553 (816)
.||.+||+|+.......... |.+ ..+ |||||+|.+.|.+..+..+....-+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll-------------------~~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLL-------------------KRK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHh-------------------CCC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 99999999998876443321 221 334 9999999999977553322111111112111
Q ss_pred ccCccccccccCCCCCCCCcEEEE-EeccCC-CCCHHHHHHHHHHhhcc----CCC---eEEEEEeccCCCCCCcchHHH
Q 003492 554 LFDPEQNDEHVGTLSDRSKPIVFS-MARLDH-VKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVNKSKDREEI 624 (816)
Q Consensus 554 l~~~~~~~~~lg~l~~~~k~iIl~-vGRL~~-~Kgl~~LieA~~~l~~~----~p~---v~LvIVG~g~~~~~~~d~e~~ 624 (816)
. ......++++ ++++++++| +||+.. .||++.+++|++++... +.+ +-|+|+=.+..+..--.-...
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~ 358 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQ 358 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcch
Confidence 1 0112344555 567777777 799997 99999999999988651 232 334444332110000000000
Q ss_pred HHH-------H------------------------------------------------------------HHHHHHHHc
Q 003492 625 AEI-------E------------------------------------------------------------KMHELMKTY 637 (816)
Q Consensus 625 ~~~-------~------------------------------------------------------------~l~~li~~~ 637 (816)
+.. + .+-..+++.
T Consensus 359 ~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~ 438 (590)
T cd03793 359 AVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRI 438 (590)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHh
Confidence 000 0 111112222
Q ss_pred CC----CCc--EEEecc---ccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc----cccc
Q 003492 638 KL----DGQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----AEII 704 (816)
Q Consensus 638 ~L----~~~--V~flG~---~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~----~EiI 704 (816)
+| .++ |.|++. .+|.+-..+.+.+++ .||+||+||++|+||++++||||||+|||+|+.+|+ .|++
T Consensus 439 ~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 439 QLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 23 222 333331 122333445677777 599999999999999999999999999999999998 5666
Q ss_pred ccC-CeEEEECC-------CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH--HHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 705 EHG-ASGFHIDP-------YHPDQAAELMADFFGKCKENPSHWKKISDGGL--KRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 705 ~dg-~~G~li~p-------~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar--~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
.++ ..|+.+.+ .+.++++++|.++ .+. +.++.+.++++ +.+ + .|+|++.++.|.+.|+.
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~----~~~-~~r~~~~~r~~~~r~s-~-----~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYMYEF----CQL-SRRQRIIQRNRTERLS-D-----LLDWRNLGRYYRKARQL 586 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHHHHH----hCC-cHHHHHHHHHHHHHHH-H-----hCCHHHHHHHHHHHHHH
Confidence 555 35777763 3344555555444 333 56777777655 444 4 69999999999998753
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=1.9e-25 Score=247.89 Aligned_cols=343 Identities=13% Similarity=0.113 Sum_probs=233.4
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g 358 (816)
|||+|++. | .||.+.... +|+++|+++||+|+ ++|..... . ....+.
T Consensus 2 ~~i~i~~~-g------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGG-G------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVPK--- 48 (357)
T ss_pred cEEEEEcC-c------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhcccc---
Confidence 89888873 2 378888777 77888899999999 88764210 0 001111
Q ss_pred CCceEEEEecCCCcccccccccccc-cchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003492 359 TEHTHILRVPFRSEKGILRQWISRF-DVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (816)
Q Consensus 359 ~~~v~I~rvp~~~~~~~~~~~isr~-~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~ 437 (816)
.++++++++.....+.. ..++. ..+.++ .....+.+.+. +.+||+||+|.+..++.+.++++..++|++++.
T Consensus 49 -~g~~~~~~~~~~~~~~~--~~~~l~~~~~~~-~~~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRKG--SLANLKAPFKLL-KGVLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCCCC--hHHHHHHHHHHH-HHHHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 25677777764321100 00000 011111 11112222222 348999999998777888888888999999876
Q ss_pred cCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCC
Q 003492 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (816)
Q Consensus 438 H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f 517 (816)
|+.... ..+++.++.+|.+++++++... . + .
T Consensus 122 ~~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---------------------~----~--~ 152 (357)
T PRK00726 122 QNAVPG----------------------LANKLLARFAKKVATAFPGAFP---------------------E----F--F 152 (357)
T ss_pred CCCCcc----------------------HHHHHHHHHhchheECchhhhh---------------------c----c--C
Confidence 642110 0123456788999988864321 0 1 1
Q ss_pred CCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHH-HHHHH
Q 003492 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV-ECYGK 596 (816)
Q Consensus 518 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~Li-eA~~~ 596 (816)
..++.+++||+|.+.+.+.... ++++. +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 5789999999998765442211 11333 45677889999988888876555 89888
Q ss_pred hhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCC
Q 003492 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (816)
Q Consensus 597 l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E 676 (816)
+.+. + ..++++|++.. +.+.+..+ +++. |.+.|++ +++..+++ ++|++|.++-
T Consensus 209 ~~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~-~~d~~i~~~g-- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYA-AADLVICRAG-- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHH-hCCEEEECCC--
Confidence 8653 3 56778898854 33444445 6664 9999943 46788888 4999999762
Q ss_pred CCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003492 677 AFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGG 746 (816)
Q Consensus 677 gFGltvlEAMA~GlPVIaT~~gG--------~~EiI~dg~~G~li~p~d--~~~lA~~I~~~l~~l~~dp~~~~~ms~~a 746 (816)
+.+++|||+||+|+|++..++ ..+.+.+..+|+++++.| +++++++|.+++ +|++.+++|++++
T Consensus 262 --~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~ 335 (357)
T PRK00726 262 --ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAA 335 (357)
T ss_pred --HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHH
Confidence 689999999999999987653 235677778999999888 999999996655 8999999999999
Q ss_pred HHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 747 LKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 747 r~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
++.+. .++-+.+++.++++.+
T Consensus 336 ~~~~~------~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 336 RALGK------PDAAERLADLIEELAR 356 (357)
T ss_pred HhcCC------cCHHHHHHHHHHHHhh
Confidence 99976 5999999999988743
No 70
>PHA01633 putative glycosyl transferase group 1
Probab=99.95 E-value=2.5e-25 Score=243.98 Aligned_cols=225 Identities=12% Similarity=0.136 Sum_probs=167.5
Q ss_pred HHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccc
Q 003492 471 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 550 (816)
Q Consensus 471 a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i 550 (816)
.|.+.+.+|++|....+... ..|++ . .+ +|+||+|++.|.|.........
T Consensus 89 ~m~~~~~vIavS~~t~~~L~--------------------~~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~~r------ 138 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQ--------------------EVGLQ--V-DL-PVFHGINFKIVENAEKLVPQLK------ 138 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHH--------------------HhCCC--C-ce-eeeCCCChhhcCccchhhHHHH------
Confidence 45567788999987766322 12443 2 23 4789999999887542111111
Q ss_pred hhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCCcchHHHHH
Q 003492 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (816)
Q Consensus 551 ~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~----v~LvIVG~g~~~~~~~d~e~~~~ 626 (816)
+.++.. .++.++|+++||+++.||++.+++|+.++.+..|+ ++|+++|++
T Consensus 139 -----------~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 139 -----------QKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred -----------HHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 112221 13567899999999999999999999999876664 578888732
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003492 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (816)
Q Consensus 627 ~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d 706 (816)
..+++++.++|+|+|... .++.+++..+++. +|+||+||.+|+||++++||||||+|||+|+.||+.|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996322 4567889999994 99999999999999999999999999999999999997542
Q ss_pred ------------------CCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHH
Q 003492 707 ------------------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERL 768 (816)
Q Consensus 707 ------------------g~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~l 768 (816)
...||.+++.|++++|++|..+++ ..|++. .+.++++++++ |+|+.++++|
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~--~~~~~~---~~~~~~~~a~~------f~~~~~~~~~ 333 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFE--LQDREE---RSMKLKELAKK------YDIRNLYTRF 333 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHh--ccChhh---hhHHHHHHHHh------cCHHHHHHHh
Confidence 235788999999999999987752 134443 37788888885 9999999998
Q ss_pred HH
Q 003492 769 MT 770 (816)
Q Consensus 769 l~ 770 (816)
++
T Consensus 334 ~~ 335 (335)
T PHA01633 334 LE 335 (335)
T ss_pred hC
Confidence 63
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=2e-25 Score=256.73 Aligned_cols=312 Identities=13% Similarity=0.072 Sum_probs=213.1
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 407 kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
..|+|+.|.....+++.++.++. ..|+++..|...+ .+.. |..+-. + ..-...|-.+|.|...+...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP----~~e~-~~~lp~------~-~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFP----SSEI-FRCLPW------R-EELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCC----ChHH-HhhCCC------h-HHHHHHHhcCCEEEECCHHH
Confidence 67999999999877777776654 5899999997543 2221 221110 0 11223566799999998765
Q ss_pred HhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccC
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg 565 (816)
.....+.....-.. ..+ ........|. ..++.++|||||++.|.+.......... +. +..+
T Consensus 199 ~~~Fl~~~~~~l~~-~~~-~~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~~----~~----------~~~~ 259 (460)
T cd03788 199 ARNFLSCCSRLLGL-EVT-DDGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQER----AA----------ELRE 259 (460)
T ss_pred HHHHHHHHHHHcCC-ccc-CCceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHHH----HH----------HHHH
Confidence 44221110000000 000 0001111121 3478999999999888654221110000 00 0112
Q ss_pred CCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003492 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (816)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~----v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 640 (816)
. .+++++|+++||+++.||+..+++|+.++.+.+|+ ++|+++|++... ...+..+..+.+++++.+.+..
T Consensus 260 ~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g---~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 260 R--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRT---DVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred h--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCc---CcHHHHHHHHHHHHHHHHHHhcc
Confidence 2 35678999999999999999999999999877775 679999865321 1123344556666666654321
Q ss_pred -----CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCc----EEEcCccccccccccCCeEE
Q 003492 641 -----GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIEHGASGF 711 (816)
Q Consensus 641 -----~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlP----VIaT~~gG~~EiI~dg~~G~ 711 (816)
..|.+++ +.++.+++..+|+ +||+||+||..||||++++||||||+| ||+|+.+|..+. +.+|+
T Consensus 335 g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~ 407 (460)
T cd03788 335 GTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGAL 407 (460)
T ss_pred CCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCE
Confidence 2355543 1678899999999 599999999999999999999999999 999999988877 46899
Q ss_pred EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 712 li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
+++|.|++++|++|.++++ .+++.++.+++++++.+. +|||+..+++++.
T Consensus 408 lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v~------~~~~~~w~~~~l~ 457 (460)
T cd03788 408 LVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYVR------THDVQAWANSFLD 457 (460)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHH------hCCHHHHHHHHHH
Confidence 9999999999999977662 356888999999999987 5999999999876
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=3.3e-24 Score=236.49 Aligned_cols=323 Identities=13% Similarity=0.119 Sum_probs=221.6
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCccccccccc
Q 003492 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (816)
Q Consensus 301 ~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~i 380 (816)
+||...++. +|++.|.++||+|+ |+|...... .+.. ...++++.++|+....+
T Consensus 9 ~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~------ 61 (350)
T cd03785 9 TGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR------ 61 (350)
T ss_pred chhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC------
Confidence 588888888 78888899999999 888653211 0111 11256777877653211
Q ss_pred ccccchhhHH------HHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhh
Q 003492 381 SRFDVWPYLE------TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (816)
Q Consensus 381 sr~~i~~yl~------~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~ 454 (816)
...+..+. .....+.+.+. +.+||+||+|....++.+.++++..++|+++..|+..+ .
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~-----------~ 125 (350)
T cd03785 62 --KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP-----------G 125 (350)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------c
Confidence 11111111 11112222232 34899999998777777888888899999875554211 0
Q ss_pred hhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCC
Q 003492 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (816)
Q Consensus 455 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~ 534 (816)
. .+.+.++.+|.|+++|+...+. ++ ..++.+++||+|.+.+.
T Consensus 126 ~-----------~~~~~~~~~~~vi~~s~~~~~~-------------------------~~--~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 L-----------ANRLLARFADRVALSFPETAKY-------------------------FP--KDKAVVTGNPVREEILA 167 (350)
T ss_pred H-----------HHHHHHHhhCEEEEcchhhhhc-------------------------CC--CCcEEEECCCCchHHhh
Confidence 0 1234556799999999876541 11 56899999999987665
Q ss_pred CCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHH-HHHHHHHhhccCCCeEE-EEEecc
Q 003492 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNL-VVVAGY 612 (816)
Q Consensus 535 p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~p~v~L-vIVG~g 612 (816)
+... + +.++. ++++++|+++|+....|+... +++++..+.+ +++++ +++|++
T Consensus 168 ~~~~---~-------------------~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE---R-------------------ARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh---H-------------------HhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4321 1 22444 566778888888777777754 4588888763 45664 466776
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcE
Q 003492 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (816)
Q Consensus 613 ~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPV 692 (816)
. .+++++.++++ .++|+|.|++ +++..+++. ||++|.++- ++|++|||+||+||
T Consensus 222 -~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 222 -D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred -c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 4 35666667666 4789999943 467888884 999998762 68999999999999
Q ss_pred EEcCccc--------cccccccCCeEEEECCC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHH
Q 003492 693 FATCHGG--------PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWK 762 (816)
Q Consensus 693 IaT~~gG--------~~EiI~dg~~G~li~p~--d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~ 762 (816)
|+++.++ ..+.+.++.+|++++++ |+++++++|.+++ +|++.+++|++++++++. .+.-+
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~------~~~~~ 345 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLAR------PDAAE 345 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcCC------CCHHH
Confidence 9987654 35677777899999987 8999999997655 799999999999998876 46666
Q ss_pred HHHH
Q 003492 763 IYSE 766 (816)
Q Consensus 763 ~~a~ 766 (816)
++++
T Consensus 346 ~i~~ 349 (350)
T cd03785 346 RIAD 349 (350)
T ss_pred HHHh
Confidence 6553
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=5.9e-24 Score=234.29 Aligned_cols=315 Identities=15% Similarity=0.138 Sum_probs=206.7
Q ss_pred HHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccccccchhhH---HHHHH
Q 003492 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTE 394 (816)
Q Consensus 318 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl---~~f~~ 394 (816)
.|+++|.++||+|+ ++|+..... . .. ....++++.+++.....+ .+....+... .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~--~----~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE--K----RL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch--h----cc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67888999999999 887532110 0 00 011256777777653211 0001111111 11112
Q ss_pred HHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhh
Q 003492 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (816)
Q Consensus 395 ~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~ 474 (816)
.+.+.+. +.+||+||+|....++.+.++++..++|++...|.... . ..+.+..+.
T Consensus 81 ~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~------~----------------~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP------G----------------LTNKLLSRF 135 (348)
T ss_pred HHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc------c----------------HHHHHHHHH
Confidence 2222233 34899999998777777888888899998743332110 0 012345678
Q ss_pred CCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhc
Q 003492 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (816)
Q Consensus 475 AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l 554 (816)
+|.+++.|+...+. -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~~------------------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKDH------------------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhhc------------------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 99999999876431 023689999987655432110
Q ss_pred cCccccccccCCCCCCCCcEEEEEeccCCCCCHHH-HHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHH
Q 003492 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (816)
Q Consensus 555 ~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~l 633 (816)
+.+++ ++++++|+++|+....|++.. +++|+.++.+. ++++++++++.. .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 12444 456788999998888888654 55888887653 466655554433 3567777
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc-------ccccccc
Q 003492 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEH 706 (816)
Q Consensus 634 i~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG-------~~EiI~d 706 (816)
++++++.+.+.|.. .++..+|+ +||++|.++ + |.+++|||+||+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~--------~~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID--------ENMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc--------cCHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 78887765555552 14677787 599999875 2 789999999999999997754 2357888
Q ss_pred CCeEEEECCCC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHH
Q 003492 707 GASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSE 766 (816)
Q Consensus 707 g~~G~li~p~d--~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~ 766 (816)
+.+|++++++| +++++++|.+++ +||+.+++|++++++++.+ ..-+++++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~~------~~~~~i~~ 346 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLAKP------DAAKRIAE 346 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcCCc------cHHHHHHh
Confidence 99999999886 999999996655 8999999999999888764 55555443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=6.5e-24 Score=243.13 Aligned_cols=318 Identities=16% Similarity=0.158 Sum_probs=215.6
Q ss_pred HHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhh
Q 003492 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (816)
Q Consensus 396 ~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~ 474 (816)
.+..+.+.. ..-|+|.+|.....+++.++.++. ..++.+..|..++ .++++. .+- ....-+..|-.
T Consensus 117 fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP----~~e~f~-~lp-------~r~~il~gll~ 183 (456)
T TIGR02400 117 FAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFP----SSEIYR-TLP-------WRRELLEGLLA 183 (456)
T ss_pred HHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCC----ChHHHh-hCC-------cHHHHHHHHhc
Confidence 333444433 245899999999988888888775 4678888996433 222221 110 11122347889
Q ss_pred CCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHH---HHHhhhhccch
Q 003492 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSIE 551 (816)
Q Consensus 475 AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~---~rl~~~~~~i~ 551 (816)
||.|...|+..+....+.....-.. ...++- ....|- ..++.++|||||++.|.+..... .+...++
T Consensus 184 ~dligF~t~~~~~~Fl~~~~~~l~~--~~~~~~-~~~~g~---~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr---- 253 (456)
T TIGR02400 184 YDLVGFQTYDDARNFLSAVSRELGL--ETLPNG-VESGGR---TVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELR---- 253 (456)
T ss_pred CCEEEECCHHHHHHHHHHHHHHhCC--cccCCc-eEECCc---EEEEEEecCcCCHHHHHHHhcChhHHHHHHHHH----
Confidence 9999999988776433322110000 000000 001121 34788999999999887643211 1111110
Q ss_pred hhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCCcchHHHHHH
Q 003492 552 QLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEI 627 (816)
Q Consensus 552 ~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~----v~LvIVG~g~~~~~~~d~e~~~~~ 627 (816)
+.+ .++++|+++||+++.||+..+++|++++.+.+|+ +.|+++|+... ....+.....
T Consensus 254 ----------~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l~ 315 (456)
T TIGR02400 254 ----------ESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQLR 315 (456)
T ss_pred ----------HHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHHH
Confidence 111 3567999999999999999999999998877775 56888864321 1112222333
Q ss_pred HHHHHHHHHcCC-CC-----cEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCc----EEEcCc
Q 003492 628 EKMHELMKTYKL-DG-----QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCH 697 (816)
Q Consensus 628 ~~l~~li~~~~L-~~-----~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlP----VIaT~~ 697 (816)
+.+++++.+.+. .+ .|.+++ ..++.+++..+|+ +||+||+||..||||++++||||||+| +|+|+.
T Consensus 316 ~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~ 391 (456)
T TIGR02400 316 RQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEF 391 (456)
T ss_pred HHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeCC
Confidence 444444332211 11 144444 2677899999999 599999999999999999999999999 999999
Q ss_pred cccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 698 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 698 gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
+|..+.+. +|++++|.|++++|++|.++++ .+++.++++.+++++++.+ ||+...++++++
T Consensus 392 ~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v~~------~~~~~W~~~~l~ 452 (456)
T TIGR02400 392 AGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKLRK------NDVQRWREDFLS 452 (456)
T ss_pred CCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhh------CCHHHHHHHHHH
Confidence 99888883 7999999999999999987763 5788999999999999874 999999999886
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=6.3e-23 Score=233.57 Aligned_cols=284 Identities=15% Similarity=0.156 Sum_probs=192.2
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHH
Q 003492 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (816)
Q Consensus 407 kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (816)
+||+||++..+........+++.|+|++.+-|.+... +...|+.+. ......++.+|.|++.|+...
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~~---------~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKFK---------RFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHHH---------HHHHHHHHhCCEEEECCHHHH
Confidence 8999998865543333345677899998876643211 111111111 113356788999999999886
Q ss_pred hhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCC
Q 003492 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (816)
Q Consensus 487 ~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~ 566 (816)
+... ..|++ .. +.+++|+ +.+.+.+....... ..+ ++.++
T Consensus 191 ~~l~--------------------~~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~~~--------------r~~~~- 230 (425)
T PRK05749 191 ERFL--------------------ALGAK--NE-VTVTGNL-KFDIEVPPELAARA-ATL--------------RRQLA- 230 (425)
T ss_pred HHHH--------------------HcCCC--CC-cEecccc-cccCCCChhhHHHH-HHH--------------HHHhc-
Confidence 6321 12443 44 7788884 33333322111110 000 01122
Q ss_pred CCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003492 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (816)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 646 (816)
+++++++++|+. .|+.+.+++|+.++.+..|+++|+|+|+|+. ..++++++++++|+. .+.|.
T Consensus 231 ---~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ---PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ---CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCc-EEEcc
Confidence 345788888864 6889999999999887789999999999875 125788888998885 35555
Q ss_pred ccccCc--------CChHHHHHHHHccccEE-EECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-CeEEEECC
Q 003492 647 AAQTNR--------ARNGELYRYIADTKGAF-VQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG-ASGFHIDP 715 (816)
Q Consensus 647 G~~~~~--------v~~~el~~~la~aaDvf-V~PS~~EgFGltvlEAMA~GlPVIaT~~-gG~~EiI~dg-~~G~li~p 715 (816)
|..... ...+++..+|+ .||++ +.||..|++|.+++|||+||+|||++.. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~-~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYA-IADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHH-hCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 02468999999 59995 5578889999999999999999999864 5666766543 46888889
Q ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 716 ~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
+|+++++++|..++ +||+.+++|+++|++.+.+ + ...++++++++.
T Consensus 373 ~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~-----~---~~~~~~~~~~l~ 418 (425)
T PRK05749 373 EDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQ-----N---QGALQRTLQLLE 418 (425)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHh-----C---ccHHHHHHHHHH
Confidence 99999999996655 8999999999999999987 4 355566666654
No 76
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=3.6e-23 Score=205.20 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=143.9
Q ss_pred CCCCcEEEEEeccCCCCCHHHHHHHHHHhhcc-CCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003492 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (816)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~-~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (816)
+.++++|+++||+.+.||++.+++++..+.+. .+++.|+|+|.+.. ...+...++.+++.++|+|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 57788999999999999999999999999864 68999999996654 677888999999999999999
Q ss_pred cccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHH
Q 003492 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (816)
Q Consensus 648 ~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~ 727 (816)
.++.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|.+
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 5667899999995 99999999999999999999999999999999999999999999999999999999999976
Q ss_pred HHHhhcCCHHHHHHHHHHHHHH
Q 003492 728 FFGKCKENPSHWKKISDGGLKR 749 (816)
Q Consensus 728 ~l~~l~~dp~~~~~ms~~ar~~ 749 (816)
++ .|++.++.|+++|+++
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 65 8999999999999975
No 77
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.90 E-value=9.1e-22 Score=220.63 Aligned_cols=262 Identities=11% Similarity=0.075 Sum_probs=177.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 406 ~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
.+||+||++++..++.....++..++|+++++++....+ .+..+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCCCCEEEECCHHH
Confidence 489999998776554444444456799886665432110 12456899999999877
Q ss_pred HhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccC
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg 565 (816)
.+... ..|++ ..|+.++++.++.. |.+...... . ++.+|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~G~p~~~~-f~~~~~~~~-~-----------------~~~~~ 197 (380)
T PRK13609 159 KKVLV--------------------DIGVP--PEQVVETGIPIRSS-FELKINPDI-I-----------------YNKYQ 197 (380)
T ss_pred HHHHH--------------------HcCCC--hhHEEEECcccChH-HcCcCCHHH-H-----------------HHHcC
Confidence 55211 12443 56788876655432 222111111 1 12356
Q ss_pred CCCCCCCcE-EEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003492 566 TLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (816)
Q Consensus 566 ~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (816)
+ ++++++ +++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 5 445554 55668888889999999987642 6789998865432 12456777776655 6899
Q ss_pred EeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCCeEEEECCCCHH
Q 003492 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGASGFHIDPYHPD 719 (816)
Q Consensus 645 flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~-~gG~----~EiI~dg~~G~li~p~d~~ 719 (816)
|+|++. ++..+++ +||++|. ++.|+|++|||+||+|+|+++ .+|. .+.+.+ +|+.+...|++
T Consensus 260 ~~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999532 4677888 5999985 466999999999999999985 5553 233433 34445567999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
+++++|.+++ +||+.+++|++++++... .++++.+++.+++++.
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~~------~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 327 EVFAKTEALL----QDDMKLLQMKEAMKSLYL------PEPADHIVDDILAENH 370 (380)
T ss_pred HHHHHHHHHH----CCHHHHHHHHHHHHHhCC------CchHHHHHHHHHHhhh
Confidence 9999996655 899999999999987665 5899999999998753
No 78
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.89 E-value=8.8e-22 Score=238.64 Aligned_cols=323 Identities=13% Similarity=0.141 Sum_probs=215.9
Q ss_pred HHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHh
Q 003492 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (816)
Q Consensus 395 ~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~ 473 (816)
..+..+.+..+ .-|+|-.|.....+++..+.++. .+++.+..|..++. +.++.. + -....-+..|-
T Consensus 136 ~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs----~e~fr~-l-------p~r~~il~gll 202 (797)
T PLN03063 136 MFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPS----SEIYKT-L-------PSRSELLRAVL 202 (797)
T ss_pred HHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCC----HHHHhh-C-------CCHHHHHHHHh
Confidence 33344444432 34899999999988888887764 67888999975442 222211 1 01112234788
Q ss_pred hCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchH---HHHHhhhhccc
Q 003492 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK---QKRLTALHGSI 550 (816)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~---~~rl~~~~~~i 550 (816)
.||.|-+.|...+...-+.....-. ...+..++ ...|. ..++.++|||||++.|.+.... ..+...+
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~-~~~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l---- 272 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILG-VEGTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMKEL---- 272 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhC-ccccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHHHH----
Confidence 9999999998776533221100000 00000010 11121 3478899999999887653221 1111110
Q ss_pred hhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeE----EEEEeccCCCCCCcchHHHHH
Q 003492 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN----LVVVAGYIDVNKSKDREEIAE 626 (816)
Q Consensus 551 ~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~----LvIVG~g~~~~~~~d~e~~~~ 626 (816)
... ..++++|+++||+++.||+..+++||+++.+.+|+++ |+.+++... .+..+
T Consensus 273 -------------r~~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr-------~~~~~ 330 (797)
T PLN03063 273 -------------KRF--FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR-------NDVPE 330 (797)
T ss_pred -------------HHh--cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC-------CchHH
Confidence 001 1357899999999999999999999999988888753 554443211 11122
Q ss_pred HHHHHHHHHHcC--CCC---cEEEecc--ccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCc----EEEc
Q 003492 627 IEKMHELMKTYK--LDG---QFRWIAA--QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFAT 695 (816)
Q Consensus 627 ~~~l~~li~~~~--L~~---~V~flG~--~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlP----VIaT 695 (816)
.+++++.++++. +++ .+.|.+. ....++.+++..+|+ +||+||.||.+||||++++||||||+| +|+|
T Consensus 331 y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlS 409 (797)
T PLN03063 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLS 409 (797)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEee
Confidence 334444444442 222 2233321 113678899999999 599999999999999999999999999 9999
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 696 ~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
..+|.++.+ +.+|++++|.|++++|++|.+++. .+++.+++..+..++++.+ +||...++.+++-+..
T Consensus 410 e~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v~~------~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 410 EFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYVKT------HSAQKWADDFMSELND 477 (797)
T ss_pred CCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhhhh------CCHHHHHHHHHHHHHH
Confidence 999999986 567999999999999999987762 4888999999999999985 9999999999886543
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.88 E-value=2e-20 Score=209.67 Aligned_cols=266 Identities=12% Similarity=0.071 Sum_probs=175.5
Q ss_pred hCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCH
Q 003492 404 LQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (816)
Q Consensus 404 l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (816)
++.+.+|++.+.+....++. ...+.++|+.+++...... ..... . ...+...++.||.|+|+|.
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~---~~~~~~~Vyd~~D~~~~~~-~~~~~---~---------~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAA---LLQASLVVYDCVDDLSAFP-GGPPE---L---------LEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHHHh---hcCCCeEEEEcccchhccC-CCCHH---H---------HHHHHHHHHhCCEEEECCH
Confidence 35566677766555433333 3567888888887543221 11100 0 0236678899999999998
Q ss_pred HHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccc
Q 003492 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (816)
Q Consensus 484 ~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (816)
...+..++ . .+++.+||||+|.+.|.+......... .
T Consensus 163 ~l~~~~~~----------------------~---~~~i~~i~ngvd~~~f~~~~~~~~~~~-----------------~- 199 (373)
T cd04950 163 SLYEAKRR----------------------L---NPNVVLVPNGVDYEHFAAARDPPPPPA-----------------D- 199 (373)
T ss_pred HHHHHHhh----------------------C---CCCEEEcccccCHHHhhcccccCCChh-----------------H-
Confidence 87552110 1 367999999999988866432110000 0
Q ss_pred cCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003492 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V 643 (816)
. ...++++|+|+|++.+.++++.+.+++. ..|+++|+++|++... .... . ....++|
T Consensus 200 ~---~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~---~-~~~~~nV 256 (373)
T cd04950 200 L---AALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPS---A-LLRLPNV 256 (373)
T ss_pred H---hcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChh---H-hccCCCE
Confidence 0 1346789999999999888776655443 3478999999998320 0111 1 1114789
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEECCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003492 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (816)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~-----EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~ 718 (816)
+|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++.. ..+..++++ ++|+
T Consensus 257 ~~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~~~~~~~-~~d~ 327 (373)
T cd04950 257 HYLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYEDEVVLI-ADDP 327 (373)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhcCcEEEe-CCCH
Confidence 9999 7888999999995 9999999863 46899999999999999999866544 444444444 5699
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHH
Q 003492 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLA 772 (816)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly 772 (816)
++++++|.+++. .+.....+ ++++.+ + .|||+..++++++..
T Consensus 328 ~~~~~ai~~~l~---~~~~~~~~---~~~~~~-~-----~~sW~~~a~~~~~~l 369 (373)
T cd04950 328 EEFVAAIEKALL---EDGPARER---RRLRLA-A-----QNSWDARAAEMLEAL 369 (373)
T ss_pred HHHHHHHHHHHh---cCCchHHH---HHHHHH-H-----HCCHHHHHHHHHHHH
Confidence 999999987652 22221111 222234 4 699999999999643
No 80
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=9.1e-21 Score=229.52 Aligned_cols=321 Identities=15% Similarity=0.122 Sum_probs=213.1
Q ss_pred HHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhh
Q 003492 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (816)
Q Consensus 396 ~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~ 474 (816)
.+..+....+ .-|+|..|.....+++..+.++. ..++.+..|..++. +.+... + + ....-+..|-.
T Consensus 123 fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~----~~~f~~-l-p------~~~~ll~~ll~ 189 (726)
T PRK14501 123 FAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS----FEVFRL-L-P------WREEILEGLLG 189 (726)
T ss_pred HHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCC----hHHHhh-C-C------ChHHHHHHHhc
Confidence 3334444333 35999999999988888887764 57888899976542 222221 1 0 11122447889
Q ss_pred CCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHH---HHHhhhhccch
Q 003492 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSIE 551 (816)
Q Consensus 475 AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~---~rl~~~~~~i~ 551 (816)
+|.|-..|........+.....-.. -+... .....|- ..++.++|||||++.|.+..... .+...++
T Consensus 190 ~Dligf~t~~~~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr---- 259 (726)
T PRK14501 190 ADLIGFHTYDYVRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLR---- 259 (726)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHH----
Confidence 9999998887654322211110000 00000 0111121 23688999999999887643211 1111110
Q ss_pred hhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCCcchHHHHHH
Q 003492 552 QLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEI 627 (816)
Q Consensus 552 ~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~----v~LvIVG~g~~~~~~~d~e~~~~~ 627 (816)
+ . .+++++|+++||+++.||+..+++|++++.+.+|+ ++|++||.+.. ..-++..+..
T Consensus 260 ----------~---~--~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l~ 321 (726)
T PRK14501 260 ----------Q---D--LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEMK 321 (726)
T ss_pred ----------H---H--cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHHH
Confidence 0 0 24567999999999999999999999999877775 68999985422 0002223444
Q ss_pred HHHHHHHHHcC----C---CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHc-----CCcEEEc
Q 003492 628 EKMHELMKTYK----L---DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC-----GLPTFAT 695 (816)
Q Consensus 628 ~~l~~li~~~~----L---~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~-----GlPVIaT 695 (816)
+.+.+++.+.+ . .+.+.+.| .++.+++..+|+ +||+||+||..||||++++||||| |.||+++
T Consensus 322 ~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~ 396 (726)
T PRK14501 322 REIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSE 396 (726)
T ss_pred HHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEec
Confidence 55555555432 1 12344556 678899999999 599999999999999999999999 5577777
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 696 ~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
..|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++. +|||+..++++++.|+.-
T Consensus 397 ~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v~------~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 397 MAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERLR------RYDVHKWASDFLDELREA 463 (726)
T ss_pred ccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHH------hCCHHHHHHHHHHHHHHH
Confidence 778888876 4899999999999999987762 234555556678888986 599999999999977643
No 81
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.87 E-value=2.3e-20 Score=189.81 Aligned_cols=121 Identities=31% Similarity=0.515 Sum_probs=103.4
Q ss_pred EEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003492 577 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (816)
Q Consensus 577 ~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~ 656 (816)
++|++.+.||++.+++++..+.+..++++++++|++.. .......+...+..++|.++| .++..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~----~~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLG----GLDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeC----CCCcH
Confidence 99999999999999999999998888999999999876 334444467778889999999 44333
Q ss_pred HHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEE
Q 003492 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (816)
Q Consensus 657 el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li 713 (816)
+....+.+.+|+++.|+..|++|.+++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 444444435999999999999999999999999999999999999999999999874
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.86 E-value=4.3e-20 Score=207.73 Aligned_cols=262 Identities=14% Similarity=0.137 Sum_probs=181.1
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHH-----cCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEE
Q 003492 406 GFPDFIIGNYSDG-NLVASLLAYK-----MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (816)
Q Consensus 406 ~kPDIIh~h~~~~-~lva~lla~~-----~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~II 479 (816)
.+||+||++++.. ...+..+++. .++|++++++++.... ..+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEEE
Confidence 4899999976543 2222333322 4789888777652110 012346899999
Q ss_pred ecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccc
Q 003492 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (816)
Q Consensus 480 t~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (816)
++|+...+.. ...|++ .+|+.++++++|.+.+.+.......
T Consensus 156 ~~s~~~~~~l--------------------~~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~~----------------- 196 (382)
T PLN02605 156 CPSEEVAKRA--------------------LKRGLE--PSQIRVYGLPIRPSFARAVRPKDEL----------------- 196 (382)
T ss_pred ECCHHHHHHH--------------------HHcCCC--HHHEEEECcccCHhhccCCCCHHHH-----------------
Confidence 9998775521 122554 6799999999987544433222211
Q ss_pred cccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh----ccCCCeE-EEEEeccCCCCCCcchHHHHHHHHHHHHH
Q 003492 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS----QLRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (816)
Q Consensus 560 ~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~----~~~p~v~-LvIVG~g~~~~~~~d~e~~~~~~~l~~li 634 (816)
++.+|+ ++++++|+++|+....|++..+++++.... ...++.+ ++++|.+.. ..+.+++.
T Consensus 197 -r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~- 261 (382)
T PLN02605 197 -RRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR- 261 (382)
T ss_pred -HHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh-
Confidence 134676 677899999999999999999999997653 1135566 556665422 12333332
Q ss_pred HHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCC
Q 003492 635 KTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHGA 708 (816)
Q Consensus 635 ~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~------gG~~EiI~dg~ 708 (816)
....+|+|+|++. ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+. +.+.++.
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCC
Confidence 2245799999543 5788888 599999865 48899999999999999984 444 3444555
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 709 SGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 709 ~G~li~p~d~~~lA~~I~~~l~~l~~d-p~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
.|+.+ .|+++++++|.+++ .| ++.+++|++++++.+. ..+++.+++.+.++
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~~------~~a~~~i~~~l~~~ 378 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLAR------PEAVFDIVHDLHEL 378 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcC------CchHHHHHHHHHHH
Confidence 67754 69999999997665 66 9999999999999987 48888888888765
No 83
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.86 E-value=5.5e-20 Score=215.98 Aligned_cols=342 Identities=13% Similarity=0.120 Sum_probs=237.0
Q ss_pred HHhCCCceEEEEcCCCchHHHHHHHHH--------------cCCcEEEEecCCCcccC---CCChh-------------h
Q 003492 402 AELQGFPDFIIGNYSDGNLVASLLAYK--------------MGITQCTIAHALEKTKY---PDSDI-------------Y 451 (816)
Q Consensus 402 ~~l~~kPDIIh~h~~~~~lva~lla~~--------------~gip~v~t~H~l~~~k~---~~~~~-------------~ 451 (816)
+.+..+||+||+|.++++++...+.+. ...+.++|.|++..... +...+ .
T Consensus 156 ~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~ 235 (601)
T TIGR02094 156 RALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLP 235 (601)
T ss_pred HHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCC
Confidence 445679999999999998777664321 13668999999766543 21111 0
Q ss_pred hhhhh---hhh-hchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCC
Q 003492 452 WKKFD---EKY-HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (816)
Q Consensus 452 ~~~~~---~~y-~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnG 527 (816)
+..+. ..+ ....++..-..++..||.|.++|+...+-.++..+.+ + .+.+....++.-|-||
T Consensus 236 ~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~~~i~gItNG 301 (601)
T TIGR02094 236 REQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEEVPIGYVTNG 301 (601)
T ss_pred HHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhcccccCCccceeCC
Confidence 10000 000 0012345567789999999999987665322211111 0 0111113358889999
Q ss_pred CcCCCCCCCchHHHHH--------------------------------hhhhccchhhcc----------C-cccccccc
Q 003492 528 ADMDIYFPYSEKQKRL--------------------------------TALHGSIEQLLF----------D-PEQNDEHV 564 (816)
Q Consensus 528 VD~~~f~p~~~~~~rl--------------------------------~~~~~~i~~~l~----------~-~~~~~~~l 564 (816)
||...+.|.+...-.. ...+..+.+.+. + +......+
T Consensus 302 Id~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~ 381 (601)
T TIGR02094 302 VHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMAT 381 (601)
T ss_pred ccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhh
Confidence 9999988754322100 000011111100 0 00001135
Q ss_pred CCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhcc--C--CCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003492 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL--R--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (816)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~--~--p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (816)
|...+++.+++++++|+..+||.+.+++++.++.+. . .++++|+.|.+.+ .|....+.++.+.+++++...+
T Consensus 382 gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~~la~~~~~~ 457 (601)
T TIGR02094 382 DRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIVEFSKRPEFR 457 (601)
T ss_pred ccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHHHHHhcccCC
Confidence 555678899999999999999999999998888642 1 3699999999975 4556667888888888875567
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEE-CCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC---
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP--- 715 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~-PS~-~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p--- 715 (816)
++|.|+- --+..+.+.+..++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|||.|.+
T Consensus 458 ~kv~f~~-----~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~ 531 (601)
T TIGR02094 458 GRIVFLE-----NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEE 531 (601)
T ss_pred CCEEEEc-----CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcc
Confidence 8999985 2345666666668999999 999 999999999999999999999999998887 6789999984
Q ss_pred ---------CCHHHHHHHHHHHHHhhc-CC-----HHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHH
Q 003492 716 ---------YHPDQAAELMADFFGKCK-EN-----PSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLA 772 (816)
Q Consensus 716 ---------~d~~~lA~~I~~~l~~l~-~d-----p~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly 772 (816)
.|++++-++|.+.+..+. ++ |..|.+|.++|++.... .|||++++++|.++|
T Consensus 532 ~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~-----~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 532 YDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAP-----RFSTNRMVREYVDKF 598 (601)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCC-----CCCHHHHHHHHHHHh
Confidence 899999999977663233 33 67799999999998776 899999999999986
No 84
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.85 E-value=2.3e-19 Score=202.57 Aligned_cols=262 Identities=13% Similarity=0.159 Sum_probs=175.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 406 ~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
.+||+||++++.+++.....++..++|+++..++.... .. +..+.+|.+++.|+..
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------~~------------------w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------KN------------------WITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------cc------------------cccCCCCEEEECCHHH
Confidence 49999999766554332333344689986554432110 01 1235789999999887
Q ss_pred HhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccC
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg 565 (816)
.+.. ...|++ ..|+.+++++++.....+.. .... +..+|
T Consensus 159 ~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~-~~~~------------------~~~~~ 197 (391)
T PRK13608 159 KQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPID-QKQW------------------LIDNN 197 (391)
T ss_pred HHHH--------------------HHcCCC--HHHEEEECeecChHhccccc-HHHH------------------HHHcC
Confidence 6521 123554 56888888877643222221 1111 12356
Q ss_pred CCCCCCCcE-EEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003492 566 TLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (816)
Q Consensus 566 ~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (816)
+ ++++++ +++.|+++..||+..+++++.+ ..+++++++++++.. +..++ +.+.++..++|.
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~----------~l~~~---l~~~~~~~~~v~ 259 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK----------ELKRS---LTAKFKSNENVL 259 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH----------HHHHH---HHHHhccCCCeE
Confidence 5 444554 5678999988999999998632 336789987765432 11222 333344556899
Q ss_pred EeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cc----cccccccCCeEEEECCCCHH
Q 003492 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GG----PAEIIEHGASGFHIDPYHPD 719 (816)
Q Consensus 645 flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~-gG----~~EiI~dg~~G~li~p~d~~ 719 (816)
++|++ +++..+|+ +||++|. .+.|+|+.|||+||+|+|+++. +| ....+.+...|+.. .|++
T Consensus 260 ~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~ 326 (391)
T PRK13608 260 ILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPE 326 (391)
T ss_pred EEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHH
Confidence 99953 35788888 5999997 3579999999999999999963 33 22234455566654 4899
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
+++++|.+++ +|++.+++|++++++... .|+++.+++++++++.
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~~------~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 327 EAIKIVASLT----NGNEQLTNMISTMEQDKI------KYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHHHh----cCHHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHhh
Confidence 9999996655 899999999999999876 5999999999998643
No 85
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=6.1e-19 Score=186.90 Aligned_cols=291 Identities=23% Similarity=0.328 Sum_probs=209.2
Q ss_pred ceEEEEcCCCchH---HHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHH
Q 003492 408 PDFIIGNYSDGNL---VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (816)
Q Consensus 408 PDIIh~h~~~~~l---va~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (816)
+|++|.+...... .........+.+.+...|....................+.+.. ......+..+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKR---LKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHH---HHHhccccccEEEECCHH
Confidence 5999987766533 3455555677888888887654332111111100000000000 001111146777787765
Q ss_pred HHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccccccc
Q 003492 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (816)
Q Consensus 485 ~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 564 (816)
.....+. ... ..++.++|||++.+.+.+.. .
T Consensus 161 ~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEA--------------------LGV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHH--------------------hCC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 4221000 011 23688999999988776530 1
Q ss_pred CCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003492 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (816)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (816)
++..+.....++++||+.+.||++.+++++..+.+..++++++++|.+... .+.+.+++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 111111246899999999999999999999999987777999999999861 345666888888888999
Q ss_pred EeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHH
Q 003492 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724 (816)
Q Consensus 645 flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~ 724 (816)
|+| .++..++..+++. +|++++||.+|+||++++|||+||+|||+++.++..+++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 5556788887874 89999999999999999999999999999999999999999878997877789999999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 725 MADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 725 I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
+..++ ++++.++.+++.+++.+.+ .|+|+..++++.+++...
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEE-----EFSWERIAEQLLELYEEL 377 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHHH
Confidence 97766 6778889999877777777 899999999999987654
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.81 E-value=1.6e-17 Score=190.16 Aligned_cols=313 Identities=11% Similarity=0.060 Sum_probs=215.5
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 407 kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
.-|+|-.|.....+++..+.++. ..++.+-.|..++. ++++.. + -.-..-+..|-.||.|-..|...
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs----~eifr~-L-------P~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPS----ADVFNI-L-------PWREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCC----hHHHhh-C-------CchHHHHHHHhcCCeEEeCCHHH
Confidence 45899999999988888887763 46777888865442 222111 1 01112234677899999988877
Q ss_pred Hhhhcccccccccc--cccc--cccc--e-------eeecCCCCCCC--cEEEecCCCcCCCCCCCch---HHHHHhhhh
Q 003492 486 IAGTKNTVGQYESH--TAFT--LPGL--Y-------RVVHGIDVFDP--KFNIVSPGADMDIYFPYSE---KQKRLTALH 547 (816)
Q Consensus 486 ~~~~k~~~~qy~~~--~~~~--~p~l--~-------~~~~Gi~~f~~--ki~VIpnGVD~~~f~p~~~---~~~rl~~~~ 547 (816)
+...-+.....-.. ..-+ .+.. + ....++..... ++.++|.|||++.|.+... ...+...+
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~l- 278 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERI- 278 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHH-
Confidence 65333221111000 0000 0000 0 00001211122 5788999999998855321 11111111
Q ss_pred ccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCCcchHH
Q 003492 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREE 623 (816)
Q Consensus 548 ~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~----v~LvIVG~g~~~~~~~d~e~ 623 (816)
++.+| ++++|++++|++..||+...++||+++.+.+|+ +.|++||.... +..++.
T Consensus 279 -------------r~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 279 -------------RSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred -------------HHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 12222 578999999999999999999999999888885 69999987653 223444
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCC----cE
Q 003492 624 IAEIEKMHELMKTY-------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PT 692 (816)
Q Consensus 624 ~~~~~~l~~li~~~-------~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~Gl----PV 692 (816)
.+..+++++++.+. +..+-+.+.+ .++.+++..+|+ +||+++.+|..||++++..|||+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 55667777777765 4445566766 788999999999 59999999999999999999999998 99
Q ss_pred EEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 693 IaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
|.|..+|.++.+ ..+++++|.|++++|++|.+++. ..++.+++--+..++++.+ +|....++.+++
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v~~------~d~~~W~~~fl~ 478 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAVNY------YDVQRWADEFLA 478 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhh------CCHHHHHHHHHH
Confidence 999999998776 35899999999999999998773 4556666666777778774 898888888876
No 87
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.79 E-value=7.7e-18 Score=187.98 Aligned_cols=275 Identities=14% Similarity=0.100 Sum_probs=177.8
Q ss_pred CCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHH
Q 003492 406 GFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (816)
Q Consensus 406 ~kPDIIh~h~~-~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (816)
.+||+||+|.. ...+.++++++.+|+|++.+.+++.... ... .|.. .. . ....-+.+|.++++|+.
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~-~~~--~~~~--~~----~----r~~~~~~ad~~~~~s~~ 151 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD-RYS--PMPE--EI----N----RQLTGHIADLHFAPTEQ 151 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC-CCC--CCcc--HH----H----HHHHHHHHHhccCCCHH
Confidence 48999999964 4467789999999999987655431100 000 0110 00 0 01122358999999988
Q ss_pred HHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccccccc
Q 003492 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (816)
Q Consensus 485 ~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 564 (816)
..+... ..|++ ..++.+++||+....+.+...... . ...+.+
T Consensus 152 ~~~~l~--------------------~~G~~--~~~I~vign~~~d~~~~~~~~~~~--~--------------~~~~~~ 193 (365)
T TIGR00236 152 AKDNLL--------------------RENVK--ADSIFVTGNTVIDALLTNVEIAYS--S--------------PVLSEF 193 (365)
T ss_pred HHHHHH--------------------HcCCC--cccEEEeCChHHHHHHHHHhhccc--h--------------hHHHhc
Confidence 765221 12554 678999999973222111100000 0 001123
Q ss_pred CCCCCCCCcEEEEEe-ccC-CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003492 565 GTLSDRSKPIVFSMA-RLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (816)
Q Consensus 565 g~l~~~~k~iIl~vG-RL~-~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (816)
+ .+++++++.+ |.. ..||+..+++|+.++.+..|+++++++|++.. ..... +.+..+..++
T Consensus 194 ~----~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~~---~~~~~~~~~~ 256 (365)
T TIGR00236 194 G----EDKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVREP---LHKHLGDSKR 256 (365)
T ss_pred C----CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHHH---HHHHhCCCCC
Confidence 3 1234555554 542 45899999999999887778899999875432 01111 3344456678
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCCHHHH
Q 003492 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQA 721 (816)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT-~~gG~~EiI~dg~~G~li~p~d~~~l 721 (816)
|+|+| .+...++..++++ +|++|.+| |..++|||+||+|||++ +.|+..|++.+| +|.++ +.|++++
T Consensus 257 v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~i 324 (365)
T TIGR00236 257 VHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKENI 324 (365)
T ss_pred EEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHHH
Confidence 99998 6667788888885 99999987 56689999999999996 778888988876 55566 4799999
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 722 A~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
+++|.+++ +||+.++++++++... .+ ..+++++++.+.+
T Consensus 325 ~~ai~~ll----~~~~~~~~~~~~~~~~-g~-----~~a~~ri~~~l~~ 363 (365)
T TIGR00236 325 TKAAKRLL----TDPDEYKKMSNASNPY-GD-----GEASERIVEELLN 363 (365)
T ss_pred HHHHHHHH----hChHHHHHhhhcCCCC-cC-----chHHHHHHHHHHh
Confidence 99996654 7999999887665222 22 4566666665554
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.77 E-value=4.8e-17 Score=179.87 Aligned_cols=236 Identities=12% Similarity=0.102 Sum_probs=162.2
Q ss_pred Cc-eEEEEcCCCch---HHHHHH--HHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEe
Q 003492 407 FP-DFIIGNYSDGN---LVASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (816)
Q Consensus 407 kP-DIIh~h~~~~~---lva~ll--a~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (816)
+| |+||.+++... +...++ .++.|+|+++++|++++........ + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~----------~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY----------L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch----------h---hHHHHHHHHhCCEEEE
Confidence 56 99999887542 122222 2344899999999976532111100 0 1235678899999999
Q ss_pred cCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccc
Q 003492 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (816)
Q Consensus 481 ~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (816)
.|+...+..+ ..|++ ..++.++++..+.....+.
T Consensus 130 ~S~~~~~~l~--------------------~~g~~--~~~i~~~~~~~~~~~~~~~------------------------ 163 (333)
T PRK09814 130 HSKKMKDRLV--------------------EEGLT--TDKIIVQGIFDYLNDIELV------------------------ 163 (333)
T ss_pred CCHHHHHHHH--------------------HcCCC--cCceEeccccccccccccc------------------------
Confidence 9998876322 12443 4567666665543111000
Q ss_pred ccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003492 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (816)
Q Consensus 561 ~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (816)
. ....++.|+|+|++.+.+++. +..++++|+|+|+|+. .. ...
T Consensus 164 ----~--~~~~~~~i~yaG~l~k~~~l~----------~~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 164 ----K--TPSFQKKINFAGNLEKSPFLK----------NWSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred ----c--cccCCceEEEecChhhchHHH----------hcCCCCeEEEECCCcc------------cc---------ccC
Confidence 0 022456899999999543211 1246799999999976 11 345
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-F----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS-~----------~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~ 709 (816)
++|.|+| .++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++..++|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 7888999999985 4433322 1 13678899999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 710 G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
|++++ +.++++++|.. .+++.+++|++++++.+..
T Consensus 281 G~~v~--~~~el~~~l~~------~~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 281 GFVVD--SLEELPEIIDN------ITEEEYQEMVENVKKISKL 315 (333)
T ss_pred eEEeC--CHHHHHHHHHh------cCHHHHHHHHHHHHHHHHH
Confidence 99998 77888888854 2467789999999998864
No 89
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.76 E-value=1.6e-16 Score=177.85 Aligned_cols=250 Identities=14% Similarity=0.125 Sum_probs=159.5
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHH
Q 003492 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (816)
Q Consensus 406 ~kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (816)
.+||+||++.+.+ +......+++.|+|+++..|.. .|....... ....+.+|.++++|+.
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~~---------~~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGRA---------FKIAKATDHVLALFPF 144 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchHH---------HHHHHHHhhheeCCcc
Confidence 4899999876432 3333345667799987654421 111000000 1135678999998876
Q ss_pred HHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCcccccccc
Q 003492 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (816)
Q Consensus 485 ~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 564 (816)
..+... ..|+ ++.++.|.+......+...... ++.+
T Consensus 145 ~~~~~~--------------------~~g~-----~~~~~G~p~~~~~~~~~~~~~~-------------------~~~l 180 (380)
T PRK00025 145 EAAFYD--------------------KLGV-----PVTFVGHPLADAIPLLPDRAAA-------------------RARL 180 (380)
T ss_pred CHHHHH--------------------hcCC-----CeEEECcCHHHhcccccChHHH-------------------HHHc
Confidence 544111 0122 2455555543322111111111 1235
Q ss_pred CCCCCCCCcEEEE-Ee-ccCCC-CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003492 565 GTLSDRSKPIVFS-MA-RLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (816)
Q Consensus 565 g~l~~~~k~iIl~-vG-RL~~~-Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L~ 640 (816)
|+ ++++++|+. .| |.... ++++.+++++..+.+..|+++++++|+++. ..+++++.++++ ++.
T Consensus 181 ~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~~ 247 (380)
T PRK00025 181 GL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGLE 247 (380)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCCC
Confidence 65 445666544 44 44443 457899999999987778899999987332 145566666666 553
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc-----------------Cccccccc
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----------------CHGGPAEI 703 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT-----------------~~gG~~Ei 703 (816)
+.+.. +++..+++ +||++|.+| |.+.+|||+||+|+|++ +.++++++
T Consensus 248 --v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 248 --VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred --eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 55542 36788888 599999997 88889999999999987 56777888
Q ss_pred cccCC--eEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003492 704 IEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (816)
Q Consensus 704 I~dg~--~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~ 751 (816)
+.++. .+++.+..|+++++++|.+++ +|++.+++|++++.+...
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~ 357 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELHQ 357 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHH
Confidence 87764 557778889999999996665 899999999998754443
No 90
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.76 E-value=5.4e-16 Score=164.05 Aligned_cols=289 Identities=17% Similarity=0.234 Sum_probs=200.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccC--------CCC-hhhhhhhhhhhhchhhhhHHHHHHhhC
Q 003492 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKY--------PDS-DIYWKKFDEKYHFSCQFTADLIAMNNA 475 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~--------~~~-~~~~~~~~~~y~f~~~~~~e~~a~~~A 475 (816)
+..|||-+-....+ +.-...++..++|++.-+|-.--++- ..+ -+.|.++...-.|++.+ ..+=..|
T Consensus 148 r~~Pdi~IDtMGY~-fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY---~~~G~~a 223 (465)
T KOG1387|consen 148 RFPPDIFIDTMGYP-FSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLY---QSAGSKA 223 (465)
T ss_pred hCCchheEecCCCc-chhHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHH---Hhccccc
Confidence 66899988433222 22223444678999999995322110 011 11222221111122211 1344579
Q ss_pred CEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhcc
Q 003492 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLF 555 (816)
Q Consensus 476 D~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~ 555 (816)
|.++++|.-.....++.. + ..+..+|+|..+++.... .
T Consensus 224 d~vm~NssWT~nHI~qiW---------------------~--~~~~~iVyPPC~~e~lks-------~------------ 261 (465)
T KOG1387|consen 224 DIVMTNSSWTNNHIKQIW---------------------Q--SNTCSIVYPPCSTEDLKS-------K------------ 261 (465)
T ss_pred eEEEecchhhHHHHHHHh---------------------h--ccceeEEcCCCCHHHHHH-------H------------
Confidence 999999876544333221 1 235667777666531100 0
Q ss_pred CccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhcc------CCCeEEEEEeccCCCCCCcchHHHHHHHH
Q 003492 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL------RELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (816)
Q Consensus 556 ~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~------~p~v~LvIVG~g~~~~~~~d~e~~~~~~~ 629 (816)
.+- .+.+.+.++++|.+.|.||.. +++.++-...+ .+.++|++||+-.. .+..+..+.
T Consensus 262 --------~~t-e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~ 325 (465)
T KOG1387|consen 262 --------FGT-EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKS 325 (465)
T ss_pred --------hcc-cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHH
Confidence 111 145678899999999999998 66555443332 35689999999865 455667789
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc--
Q 003492 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH-- 706 (816)
Q Consensus 630 l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~-EiI~d-- 706 (816)
|++++++++++++|.|.- .++.+++..++.. |.+.|+..+.|-||+.|+||||+|+..|+.+.||+. +|+.+
T Consensus 326 Lkd~a~~L~i~~~v~F~~----N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~ 400 (465)
T KOG1387|consen 326 LKDLAEELKIPKHVQFEK----NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWD 400 (465)
T ss_pred HHHHHHhcCCccceEEEe----cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccC
Confidence 999999999999999987 7899999999995 999999999999999999999999999999998875 55543
Q ss_pred -CCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 707 -GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 707 -g~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
..+||+.+ +.++.|++|.++.. .|++.+..|.++||..+. +|+-....+.+.+.
T Consensus 401 G~~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~~------RFsE~~F~kd~~~~ 455 (465)
T KOG1387|consen 401 GETTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSLA------RFGELKFDKDWENP 455 (465)
T ss_pred CccceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHH------HhhHHHHHHhHhHH
Confidence 34899985 77899999988764 788889999999999988 48887777777754
No 91
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.76 E-value=2.1e-16 Score=188.95 Aligned_cols=342 Identities=13% Similarity=0.109 Sum_probs=233.2
Q ss_pred HHHhCCCceEEEEcCCCchHHHH-----HHHHH----------cCCcEEEEecCCCcccCC--CChhh------------
Q 003492 401 TAELQGFPDFIIGNYSDGNLVAS-----LLAYK----------MGITQCTIAHALEKTKYP--DSDIY------------ 451 (816)
Q Consensus 401 ~~~l~~kPDIIh~h~~~~~lva~-----lla~~----------~gip~v~t~H~l~~~k~~--~~~~~------------ 451 (816)
++.+..+||+||+|.++++++.. ++... .+.+.|+|.|+..+.... ..+..
T Consensus 242 Lr~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lg 321 (778)
T cd04299 242 LRALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELG 321 (778)
T ss_pred HHHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcC
Confidence 34456689999999999988776 44321 135679999997654421 11111
Q ss_pred --hhhhhhhh-hc----hhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEe
Q 003492 452 --WKKFDEKY-HF----SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV 524 (816)
Q Consensus 452 --~~~~~~~y-~f----~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VI 524 (816)
+..+...- .+ ..++..-..+++.|+.+.++|+-.-.-.++.... ...|.+....++.-|
T Consensus 322 l~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~I 387 (778)
T cd04299 322 LSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGHV 387 (778)
T ss_pred CCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceece
Confidence 10000000 00 1235556789999999999998653322332111 112333224468899
Q ss_pred cCCCcCCCCC-CCchHHH-------------------------------HHhhhhccchhhccC---------cc--ccc
Q 003492 525 SPGADMDIYF-PYSEKQK-------------------------------RLTALHGSIEQLLFD---------PE--QND 561 (816)
Q Consensus 525 pnGVD~~~f~-p~~~~~~-------------------------------rl~~~~~~i~~~l~~---------~~--~~~ 561 (816)
-|||+...+. |....-- .....+..+.+.+-. .. ..-
T Consensus 388 TNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~ 467 (778)
T cd04299 388 TNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEI 467 (778)
T ss_pred eCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhh
Confidence 9999998887 4321110 000000111111100 00 000
Q ss_pred cccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhcc----CCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHc
Q 003492 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (816)
Q Consensus 562 ~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~----~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~ 637 (816)
...+...+++.++|+++.|+..+|+.+.++..+.++.+. ...+++|+.|.+.+ .|....+.++.+.+++++.
T Consensus 468 ~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p 543 (778)
T cd04299 468 GEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRP 543 (778)
T ss_pred hhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCc
Confidence 012444477888999999999999999999988777542 12599999999876 4667788889999999877
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccccEEEECCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC
Q 003492 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP 715 (816)
Q Consensus 638 ~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p 715 (816)
...++|.|+- . .+..+.+.+-..+|++++||+ +|++|++-+=||.-|.+.+++-.|...|.. ++.|||.|.+
T Consensus 544 ~~~~kVvfle----~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~ 617 (778)
T cd04299 544 EFRGRIVFLE----D-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGD 617 (778)
T ss_pred CCCCcEEEEc----C-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCC
Confidence 7778999985 2 345667666668999999999 999999999999999999999999999988 8899999988
Q ss_pred ------------CCHHHHHHHHHHHHH-hhcC-----CHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 716 ------------YHPDQAAELMADFFG-KCKE-----NPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 716 ------------~d~~~lA~~I~~~l~-~l~~-----dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
.|.+++-+.|.+.+. ...+ .|..|.+|.+++++.+.. .|||..++++|.+-
T Consensus 618 ~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p-----~fs~~Rmv~eY~~~ 686 (778)
T cd04299 618 GDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGP-----RFSAERMVREYVER 686 (778)
T ss_pred CccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhccc-----CCCHHHHHHHHHHH
Confidence 566777777765443 2223 388999999999999887 99999999999984
No 92
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=1.1e-16 Score=177.58 Aligned_cols=250 Identities=14% Similarity=0.115 Sum_probs=166.5
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHH
Q 003492 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (816)
Q Consensus 406 ~kPDIIh~h~~~-~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (816)
.+||+||+|... ..+.+.++++..|+|++++.|+..... ... .|... .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~--~~~-~~~~~------------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD--RGM-PDEEN------------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC--CCC-CchHH------------HHHHHHHhhhccCCCHH
Confidence 389999999754 356678888889999887766542210 000 11110 11234578999999988
Q ss_pred HHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCC-cCCCCCCCchHHHHHhhhhccchhhccCccccccc
Q 003492 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (816)
Q Consensus 485 ~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGV-D~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (816)
..+.. ...|++ ..|+.+++|++ |...+.+...... ..++.
T Consensus 152 ~~~~l--------------------~~~G~~--~~kI~vign~v~d~~~~~~~~~~~~-----------------~~~~~ 192 (363)
T cd03786 152 ARRNL--------------------LQEGEP--PERIFVVGNTMIDALLRLLELAKKE-----------------LILEL 192 (363)
T ss_pred HHHHH--------------------HHcCCC--cccEEEECchHHHHHHHHHHhhccc-----------------hhhhh
Confidence 76521 123554 67899999985 4322111100000 00112
Q ss_pred cCCCCCCCCcEEEEEeccCC---CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 003492 564 VGTLSDRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 639 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L- 639 (816)
+++ ++++.+++++||... .||++.+++++.++.+. ++.+++.|++.. .+++++.+.++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 444 344556778999875 79999999999988653 566666666554 4677777888876
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCCeEEEECCC-C
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPY-H 717 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~-gG~~EiI~dg~~G~li~p~-d 717 (816)
.++|+|+| .....++..+++ +||++|.||- | ++.|||+||+|||+++. +...+.+++| ..+..+ |
T Consensus 257 ~~~v~~~~----~~~~~~~~~l~~-~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g---~~~~~~~~ 323 (363)
T cd03786 257 HPNVLLIS----PLGYLYFLLLLK-NADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG---TNVLVGTD 323 (363)
T ss_pred CCCEEEEC----CcCHHHHHHHHH-cCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee---eEEecCCC
Confidence 67899998 455678888888 4999999984 4 47899999999999964 4466666544 333333 6
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHH
Q 003492 718 PDQAAELMADFFGKCKENPSHWKKI 742 (816)
Q Consensus 718 ~~~lA~~I~~~l~~l~~dp~~~~~m 742 (816)
+++++++|.+++ +|+..+..|
T Consensus 324 ~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 324 PEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred HHHHHHHHHHHh----cCchhhhcC
Confidence 899999996655 788777666
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.72 E-value=1.2e-15 Score=185.10 Aligned_cols=317 Identities=14% Similarity=0.143 Sum_probs=210.6
Q ss_pred HHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhh
Q 003492 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (816)
Q Consensus 396 ~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~ 474 (816)
.+..+.+..+ .-|+|.+|.....+++.++.++. ..++.+..|..++. +.++. .+ -+...-+..|-.
T Consensus 221 FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs----~Eifr-~L-------P~r~elL~glL~ 287 (934)
T PLN03064 221 FADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPS----SEIHR-TL-------PSRSELLRSVLA 287 (934)
T ss_pred HHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCC----hHHHh-hC-------CcHHHHHHHHhc
Confidence 3334444332 34899999999988888888764 57888899975442 22211 11 111123447889
Q ss_pred CCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCC--CcEEEecCCCcCCCCCCCch---HHHHHhhhhcc
Q 003492 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALHGS 549 (816)
Q Consensus 475 AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~--~ki~VIpnGVD~~~f~p~~~---~~~rl~~~~~~ 549 (816)
||.|-..|+..+...-+.....- .+. ....++.... -++.+.|-|||.+.|..... ...+...+.
T Consensus 288 aDlIGFqT~~y~rhFl~~c~rlL-----g~~---~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr-- 357 (934)
T PLN03064 288 ADLVGFHTYDYARHFVSACTRIL-----GLE---GTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELK-- 357 (934)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHh-----Ccc---ccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHH--
Confidence 99999999877653222111000 000 0011222112 24667899999988854321 111111111
Q ss_pred chhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeE--EEEE--eccCCCCCCcchHHHH
Q 003492 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN--LVVV--AGYIDVNKSKDREEIA 625 (816)
Q Consensus 550 i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~--LvIV--G~g~~~~~~~d~e~~~ 625 (816)
+.+ .++.+|++++|++..||+...++||.++.+.+|+++ ++++ .... ...-++..+
T Consensus 358 ------------~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps---r~~v~eY~~ 417 (934)
T PLN03064 358 ------------ERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT---RTDVPEYQK 417 (934)
T ss_pred ------------HHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC---CCCcHHHHH
Confidence 111 356799999999999999999999999888778754 4444 3211 111123333
Q ss_pred HHHHHHHHHHHcC----CCC--cEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCC----cEEEc
Q 003492 626 EIEKMHELMKTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PTFAT 695 (816)
Q Consensus 626 ~~~~l~~li~~~~----L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~Gl----PVIaT 695 (816)
...++.+++.+.+ -.+ -|+++. ..++.+++..+|+ .||+|+.||..|||+++..|||+|+. ++|.|
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 4445555555432 111 144443 3578999999999 59999999999999999999999944 44449
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 696 ~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
..+|.++.+ +..+++++|.|.+++|++|.+++. .+++.+++..++.++++.+ +||...++.+++
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V~~------~d~~~Wa~~fl~ 557 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHVTT------HTAQEWAETFVS 557 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhccc------CCHHHHHHHHHH
Confidence 999998888 556899999999999999988763 4899999999999999985 999999999776
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.66 E-value=1.4e-14 Score=168.51 Aligned_cols=169 Identities=12% Similarity=0.177 Sum_probs=146.4
Q ss_pred CcEEEEEe--ccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC---------
Q 003492 572 KPIVFSMA--RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--------- 640 (816)
Q Consensus 572 k~iIl~vG--RL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~--------- 640 (816)
+..+++++ |+ +.|.++.+++++.++....|++.|.+.|-+.+ ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 34677888 99 99999999999999999999999999998853 11245666777777666
Q ss_pred --------------------CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003492 641 --------------------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (816)
Q Consensus 641 --------------------~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~ 700 (816)
++|.|.|. ....++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy----~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTL----TNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEec----CCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 78999994 344578888986 99999999999999 9999999999999 5678
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 701 ~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
.++|.||.||+++ +|..+++++|..+| .++..|++++..+.+.+.+ ||-+.+.++|.++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~~~------yS~~~i~~kW~~~ 518 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLIDD------YSSENIIERLNEL 518 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH------hhHHHHHHHHHhh
Confidence 9999999999999 59999999997766 8999999999999999985 9999999998775
No 95
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.58 E-value=4.6e-15 Score=141.26 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=96.4
Q ss_pred CcEEEEEeccCCCCCHHHHHH-HHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003492 572 KPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~Lie-A~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (816)
.++|+++|++.+.||++.+++ ++.++.+..|+++|+|+|++++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 467999999999999999999 9999998889999999999764 23333 235899999
Q ss_pred CcCChHHHHHHHHccccEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003492 651 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (816)
Q Consensus 651 ~~v~~~el~~~la~aaDvfV~PS~-~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l 729 (816)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 45 589999995 999999986 68999999999999999999998 677777666778878 889999999997665
No 96
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.55 E-value=4e-13 Score=153.70 Aligned_cols=329 Identities=15% Similarity=0.181 Sum_probs=177.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCC---CChhh-------hhhhhhhhhchhhhhHHHHHHhh
Q 003492 406 GFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYP---DSDIY-------WKKFDEKYHFSCQFTADLIAMNN 474 (816)
Q Consensus 406 ~kPDIIh~h~~~~~lva~lla~~-~gip~v~t~H~l~~~k~~---~~~~~-------~~~~~~~y~f~~~~~~e~~a~~~ 474 (816)
.+.-|.|+|-|+.+.-..++.++ ..|..|+|.|+.-..++. ..++| +......+....++..|+.+.+.
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 34556789999885544443333 357788999984222111 01111 22222334444556678889999
Q ss_pred CCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHH----Hhhhhccc
Q 003492 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR----LTALHGSI 550 (816)
Q Consensus 475 AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~r----l~~~~~~i 550 (816)
||++.|+|+-.....+..++ ...=.|+|||.|.+.|....+..+. ..+++..+
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999876654333221 1112478999999877555432321 12223223
Q ss_pred hhhccCccccccccCCCCCCCCcEEEEEeccC-CCCCHHHHHHHHHHhhcc----CCC---eEEEEEeccCCCCCCcchH
Q 003492 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQL----REL---VNLVVVAGYIDVNKSKDRE 622 (816)
Q Consensus 551 ~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~~----~p~---v~LvIVG~g~~~~~~~d~e 622 (816)
...++.. +.+ ..++..+|+..||.. +.||++.++||++++... ..+ +-|+|+=.... +...|
T Consensus 279 ~~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~---~~~ve 348 (633)
T PF05693_consen 279 RGHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTN---SFNVE 348 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEE---EE-HH
T ss_pred HHHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccC---CcCHH
Confidence 3333322 111 123456788999998 789999999999988532 222 33444432111 11111
Q ss_pred HHH----------------------------------------------------------------------HHHHHHH
Q 003492 623 EIA----------------------------------------------------------------------EIEKMHE 632 (816)
Q Consensus 623 ~~~----------------------------------------------------------------------~~~~l~~ 632 (816)
-.. ..+.+-.
T Consensus 349 ~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn 428 (633)
T PF05693_consen 349 SLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILN 428 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHH
Confidence 000 0111222
Q ss_pred HHHHcCC----CCcE--EEecc---ccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccc
Q 003492 633 LMKTYKL----DGQF--RWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 703 (816)
Q Consensus 633 li~~~~L----~~~V--~flG~---~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~Ei 703 (816)
.+++.++ .++| .|++. ..|.+-+-+.+.++. .+|+.|+||+||++|.|-+|+.++|+|+|+|+..|....
T Consensus 429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~-GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~ 507 (633)
T PF05693_consen 429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVR-GCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCW 507 (633)
T ss_dssp HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHH-HSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHH
T ss_pred HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhc-cCceeeeccccccccCChHHHhhcCCceeeccchhHHHH
Confidence 3334444 2333 34331 233444556778888 599999999999999999999999999999999887655
Q ss_pred ccc-----CCeEEEE-C--CCCHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 704 IEH-----GASGFHI-D--PYHPDQAAELMADFFGK-CKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 704 I~d-----g~~G~li-~--p~d~~~lA~~I~~~l~~-l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
+.+ ...|+.+ + -.+.++.+++|.+.+.. +..++..+..+..++.+... ..+|+....-|.+.|..
T Consensus 508 ~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~------~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 508 MQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSD------LADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGG------GGBHHHHCHHHHHHHHH
T ss_pred HHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH------hCCHHHHHHHHHHHHHH
Confidence 542 3356543 3 44677777777776654 34566677777766755554 69999999999887643
No 97
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.52 E-value=4.4e-12 Score=143.26 Aligned_cols=251 Identities=16% Similarity=0.099 Sum_probs=153.3
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCH
Q 003492 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (816)
Q Consensus 405 ~~kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (816)
+.+||+|++....+ ++.....++.+|+|+++.+ ..+ -+.|.... -+...+.+|.|+++++
T Consensus 87 ~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~-------~waw~~~~-----------~r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 87 QAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQ-------VWAWRKWR-----------AKKIEKATDFLLAILP 147 (385)
T ss_pred hcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCc-------HhhcCcch-----------HHHHHHHHhHhhccCC
Confidence 34999999888644 5556668888999987433 111 12232111 1234467899999887
Q ss_pred HHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCC-CchHHHHHhhhhccchhhccCcccccc
Q 003492 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP-YSEKQKRLTALHGSIEQLLFDPEQNDE 562 (816)
Q Consensus 484 ~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p-~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (816)
.+.+..+ ..| .+..++.|++-...... ...... ++
T Consensus 148 ~e~~~~~--------------------~~g-----~~~~~vGnPv~~~~~~~~~~~~~~-------------------r~ 183 (385)
T TIGR00215 148 FEKAFYQ--------------------KKN-----VPCRFVGHPLLDAIPLYKPDRKSA-------------------RE 183 (385)
T ss_pred CcHHHHH--------------------hcC-----CCEEEECCchhhhccccCCCHHHH-------------------HH
Confidence 7654111 011 24556777663322211 111111 12
Q ss_pred ccCCCCCCCCcEEEEEe--ccCC-CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003492 563 HVGTLSDRSKPIVFSMA--RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vG--RL~~-~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L 639 (816)
.+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.... ..+.++++.+.++.
T Consensus 184 ~lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~ 250 (385)
T TIGR00215 184 KLGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGP 250 (385)
T ss_pred HcCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCC
Confidence 3565 56677777663 7766 6899999999999988788999877654422 13455666666766
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-----------------cccc
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-----------------GPAE 702 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~g-----------------G~~E 702 (816)
..+|.+.+. +...+|+ +||++|.+| |.+.+|||+||+|+|.+.-. +++.
T Consensus 251 ~~~v~~~~~--------~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~n 316 (385)
T TIGR00215 251 DLQLHLIDG--------DARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPN 316 (385)
T ss_pred CCcEEEECc--------hHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence 667776641 3456777 599999998 88888999999999987211 1222
Q ss_pred ccccCCeEE-EE-CCCCHHHHHHHHHHHHHhhcCCH----HHHHHHHHHHHHH
Q 003492 703 IIEHGASGF-HI-DPYHPDQAAELMADFFGKCKENP----SHWKKISDGGLKR 749 (816)
Q Consensus 703 iI~dg~~G~-li-~p~d~~~lA~~I~~~l~~l~~dp----~~~~~ms~~ar~~ 749 (816)
++.+....- ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.+.
T Consensus 317 il~~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~~ 365 (385)
T TIGR00215 317 ILANRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEEL 365 (385)
T ss_pred HhcCCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHHH
Confidence 232211111 11 2336778888885554 888 8777776554444
No 98
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=6.3e-12 Score=133.79 Aligned_cols=388 Identities=13% Similarity=0.093 Sum_probs=229.5
Q ss_pred HHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHH
Q 003492 320 LLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 399 (816)
Q Consensus 320 a~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ 399 (816)
|..|++.|++|+ ++.-. +. -..+.+-..++++|+.+|-.+..+..++.+. ....-+-.|..-....
T Consensus 33 A~Sla~~gf~Vd----liGy~--~s------~p~e~l~~hprI~ih~m~~l~~~~~~p~~~~--l~lKvf~Qfl~Ll~aL 98 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYV--ES------IPLEELLNHPRIRIHGMPNLPFLQGGPRVLF--LPLKVFWQFLSLLWAL 98 (444)
T ss_pred HHHHHHcCCeEE----EEEec--CC------CChHHHhcCCceEEEeCCCCcccCCCchhhh--hHHHHHHHHHHHHHHH
Confidence 345799999999 76432 11 1234444456889998876654322211110 0000111222111111
Q ss_pred HHHHhCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCCcc-cCCCChhhhhhhhhhhhchhhhhHHHHHHhhC
Q 003492 400 ITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKT-KYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (816)
Q Consensus 400 i~~~l~~kPDIIh~h~~~~---~lva~lla~~~gip~v~t~H~l~~~-k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~A 475 (816)
+ ..+.||+|....+.+ -.++.+++...|.++++..|++..+ ... ..........+ +....|...-+.|
T Consensus 99 ~---~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~---~~~g~~h~lV~--l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 99 F---VLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLK---LKLGFQHPLVR--LVRWLEKYFGKLA 170 (444)
T ss_pred H---hccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHH---hhcCCCCchHH--HHHHHHHHhhccc
Confidence 1 145899999888765 5677777788899999999987653 100 00000011111 1112355566779
Q ss_pred CEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhcc
Q 003492 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLF 555 (816)
Q Consensus 476 D~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~ 555 (816)
|.-.|+|....+...+..|.-.+...+--|-- ++.+.....=-..+-|-|...|... ....+.++...|
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps----~~~~l~~~H~lf~~l~~d~~~f~ar-------~~q~~~~~~taf 239 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGINRAKVLYDRPPS----KPTPLDEQHELFMKLAGDHSPFRAR-------EPQDKALERTAF 239 (444)
T ss_pred ccchhhHHHHHHHHHHhcCCceeEEEecCCCC----CCCchhHHHHHHhhhccccchhhhc-------ccccchhhhhhH
Confidence 99999998887655555442211110000000 0000000000000111111111110 000112222333
Q ss_pred CccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhc-------cCCCeEEEEEeccCCCCCCcchHHHHHHH
Q 003492 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ-------LRELVNLVVVAGYIDVNKSKDREEIAEIE 628 (816)
Q Consensus 556 ~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~-------~~p~v~LvIVG~g~~~~~~~d~e~~~~~~ 628 (816)
..-......-. ......++++....++..++..|++|+....+ ..|.+-.+|.|.|+. ++
T Consensus 240 ~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl------------kE 306 (444)
T KOG2941|consen 240 TKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL------------KE 306 (444)
T ss_pred hhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch------------hH
Confidence 22221110111 12334467777789999999999999974321 247788888999988 77
Q ss_pred HHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEEC--CC-CCCCcHHHHHHHHcCCcEEEcCccccccccc
Q 003492 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP--AF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE 705 (816)
Q Consensus 629 ~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~P--S~-~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~ 705 (816)
+..+.++++++. +|.+.- .+...++.+..++ +||..|+- |. .=-.|++|+....||+||+|-+...+.|+++
T Consensus 307 ~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVk 381 (444)
T KOG2941|consen 307 KYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVK 381 (444)
T ss_pred HHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHh
Confidence 888889999885 466554 3667788888888 49876653 33 2347899999999999999999999999999
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHH
Q 003492 706 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSER 767 (816)
Q Consensus 706 dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ 767 (816)
|++||++|+ |.+++|++|.-+++..-.|.+..+++..++++..+ +.|+..=++
T Consensus 382 h~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e-------~RW~~~W~~ 434 (444)
T KOG2941|consen 382 HGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREEQE-------LRWDESWER 434 (444)
T ss_pred cCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHh-------hhHHHHHHH
Confidence 999999998 99999999988887677799999999999998843 566544333
No 99
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.35 E-value=5.1e-12 Score=113.10 Aligned_cols=92 Identities=26% Similarity=0.513 Sum_probs=85.3
Q ss_pred EEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003492 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (816)
Q Consensus 668 vfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar 747 (816)
+++.|+...+++..++|+||||+|||+++.++..+++.+|..++.++ |+++++++|..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999998 9999999996554 89999999999999
Q ss_pred HHHHhhcccCCCCHHHHHHHHHH
Q 003492 748 KRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 748 ~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
+++.+ +|||+..++++++
T Consensus 75 ~~v~~-----~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLK-----RHTWEHRAEQILE 92 (92)
T ss_pred HHHHH-----hCCHHHHHHHHHC
Confidence 99999 9999999999874
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.33 E-value=2.1e-10 Score=132.14 Aligned_cols=310 Identities=15% Similarity=0.135 Sum_probs=178.0
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 407 kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
.-|+|-.|.....+++..+.++. ..++.+..|..+++ ++. ++.+ -....-+..|-.||.|-..|+..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs----~e~-fr~l-------P~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS----SEI-FRCL-------PWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHH-HTTS-------TTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC----HHH-HhhC-------CcHHHHHHHhhcCCEEEEecHHH
Confidence 67999999999888888887765 67888899975442 111 1111 11112234788999999999877
Q ss_pred Hhhhcccccccccccccccccceeeec-CCCCCC--CcEEEecCCCcCCCCCCCch---HHHHHhhhhccchhhccCccc
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRVVH-GIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALHGSIEQLLFDPEQ 559 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~~~-Gi~~f~--~ki~VIpnGVD~~~f~p~~~---~~~rl~~~~~~i~~~l~~~~~ 559 (816)
+...-+.....- +.-+.... ++.... -++.+.|-|||.+.|..... ...+...+.
T Consensus 209 ~~nFl~~~~r~l-------g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~------------ 269 (474)
T PF00982_consen 209 ARNFLSCCKRLL-------GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELR------------ 269 (474)
T ss_dssp HHHHHHHHHHHS--------EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHH------------
T ss_pred HHHHHHHHHHHc-------CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHH------------
Confidence 653322211110 00000000 122112 25677899999876642111 111111111
Q ss_pred cccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCC----CeEEEEEeccCCCCCCcchHHHHHHHHHHHHHH
Q 003492 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (816)
Q Consensus 560 ~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p----~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (816)
+.+ ..+..+|+.+.|++..||+..=+.||.++.+.+| ++.|+-++.... +...+..+..+++.+++.
T Consensus 270 --~~~----~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y~~~~~~v~~~v~ 340 (474)
T PF00982_consen 270 --EKF----KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEYQELRREVEELVG 340 (474)
T ss_dssp --HHT----TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHHHHHHHHHHHHHH
T ss_pred --Hhc----CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhHHHHHHHHHHHHH
Confidence 111 1224799999999999999999999999877665 477877776332 333344455566666655
Q ss_pred H----cCCCC--cEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCc----EEEcCccccccccc
Q 003492 636 T----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIE 705 (816)
Q Consensus 636 ~----~~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlP----VIaT~~gG~~EiI~ 705 (816)
+ +|-.+ -|.++. ..++.+++..++. .||+++.+|..+|.-++..|+.+|-.+ +|.|...|.++.+.
T Consensus 341 ~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~-~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~ 416 (474)
T PF00982_consen 341 RINGKYGTPDWTPIIYIY---RSLSFEELLALYR-AADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLS 416 (474)
T ss_dssp HHHHHH-BTTB-SEEEE----S---HHHHHHHHH-H-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-T
T ss_pred HHHhhcccCCceeEEEEe---cCCCHHHHHHHHH-hhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcC
Confidence 4 33322 255554 3678899999999 599999999999999999999999765 77888888888885
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 706 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 706 dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
+ ..++++|.|.+++|++|.++++ ..++.++..-+..++.+.+ +|....++.+++-
T Consensus 417 ~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v~~------~~~~~W~~~~l~~ 471 (474)
T PF00982_consen 417 E--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYVRE------HDVQWWAESFLRD 471 (474)
T ss_dssp T--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHH------T-HHHHHHHHHHH
T ss_pred C--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHhHh------CCHHHHHHHHHHH
Confidence 4 3489999999999999998774 5777788887888888886 9998888888764
No 101
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.28 E-value=1e-09 Score=125.42 Aligned_cols=310 Identities=13% Similarity=0.079 Sum_probs=206.4
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 407 kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
.-|+|-.|.....+++..+.++. ..++.+-.|..++. ++++ +.+- +-..-+..|-.+|.|-..|...
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs----~eif-r~LP-------~r~eil~glL~aDlIGFqt~~y 190 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPT----PEIF-NALP-------PHDELLEQLCDYDLLGFQTEND 190 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCC----hHHH-hhCC-------ChHHHHHHHHhCccceeCCHHH
Confidence 45899999999888888887663 56788888875442 2221 1111 1112234677899999988877
Q ss_pred HhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchH--HHHHhhhhccchhhccCccccccc
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK--QKRLTALHGSIEQLLFDPEQNDEH 563 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~--~~rl~~~~~~i~~~l~~~~~~~~~ 563 (816)
....-+.....-.. ....+......|- .-++.+.|-|||.+.|...... ..+...+ ++.
T Consensus 191 ~rnFl~~~~~~lg~--~~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~~~l--------------r~~ 251 (474)
T PRK10117 191 RLAFLDCLSNLTRV--TTRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKLAQL--------------KAE 251 (474)
T ss_pred HHHHHHHHHHHcCC--cccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHHHHH--------------HHH
Confidence 65333221110000 0000000001111 2257789999998776432111 1111111 011
Q ss_pred cCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcC-
Q 003492 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK- 638 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~----v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~- 638 (816)
+ .++.+|+.+.|+|..||+..=++||+++.+.+|+ +.|+-|+.. ..+.-.+..+...++++++.+.+
T Consensus 252 ~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~l~~~v~~~vg~INg 323 (474)
T PRK10117 252 L-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQDIRHQLETEAGRING 323 (474)
T ss_pred c-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHHHHHHHHHHHHHHHh
Confidence 1 3467999999999999999999999999877764 667777632 22333344455666666666532
Q ss_pred ---CCC--cEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCC-----cEEEcCccccccccccCC
Q 003492 639 ---LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCHGGPAEIIEHGA 708 (816)
Q Consensus 639 ---L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~Gl-----PVIaT~~gG~~EiI~dg~ 708 (816)
-.+ -|+++- ..++.+++..+|. +||+++.++..+|.-|+..|+.||-. ++|.|...|.++.+.
T Consensus 324 ~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~--- 396 (474)
T PRK10117 324 KYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--- 396 (474)
T ss_pred ccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---
Confidence 222 144443 4678899999999 59999999999999999999999965 378899988888883
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 709 ~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
..++++|.|.+++|++|.+++. ..++.+++.-+..++.+.+ +|....++.+++-
T Consensus 397 ~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v~~------~dv~~W~~~fL~~ 450 (474)
T PRK10117 397 SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVIVK------NDINHWQECFISD 450 (474)
T ss_pred CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHhhh------CCHHHHHHHHHHH
Confidence 3789999999999999998874 5777777777788888885 8999988888874
No 102
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.27 E-value=3.7e-11 Score=117.73 Aligned_cols=167 Identities=16% Similarity=0.176 Sum_probs=84.9
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCccccccc
Q 003492 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 378 (816)
Q Consensus 299 p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~ 378 (816)
+..||.+.++. +|+++|+++||+|+ |+|....+..... ........+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~-----------~~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE-----------LVKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST-----------EEEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh-----------ccceeeeeecccc------
Confidence 45799999999 77778899999999 8876644332111 0011111111110
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcc--cCCCChhhhhhhh
Q 003492 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKT--KYPDSDIYWKKFD 456 (816)
Q Consensus 379 ~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~--k~~~~~~~~~~~~ 456 (816)
....+.......+.+.+.+. +|||||+|.+...+.+.+... ++|.|.+.|+.... ...........+.
T Consensus 60 -----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~ 129 (177)
T PF13439_consen 60 -----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKLSPYSYLN 129 (177)
T ss_dssp -----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSCCCHHHHH
T ss_pred -----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccccchhhhhh
Confidence 01111112223344444443 899999999766544444444 99999999985521 1000000000000
Q ss_pred hhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCC
Q 003492 457 EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (816)
Q Consensus 457 ~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~ 534 (816)
. .......+.+|.+||+|...++...+ .|++ ..|+.|||||||++.|.
T Consensus 130 ~--------~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 130 F--------RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp H--------CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH-
T ss_pred h--------hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHcC
Confidence 0 01223478899999999988774332 2444 67999999999998773
No 103
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.24 E-value=2.5e-11 Score=116.99 Aligned_cols=160 Identities=19% Similarity=0.277 Sum_probs=84.8
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccc
Q 003492 302 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWIS 381 (816)
Q Consensus 302 GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~is 381 (816)
||.+.++. +|+++|.++||+|+ |+|...++.. .... ..++.+.++|+.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~----- 54 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWPL----- 54 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSGG-----
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchhh-----
Confidence 89999999 77778899999999 9986643321 1111 236888888877542111
Q ss_pred cccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhc
Q 003492 382 RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHF 461 (816)
Q Consensus 382 r~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f 461 (816)
..+..+ ..+.+.+ .....+||+||+|++..++++.++++..++|+|+++|+...... ..|.. ..+
T Consensus 55 --~~~~~~----~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~--~~~-- 119 (160)
T PF13579_consen 55 --RLLRFL----RRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR--RLY-- 119 (160)
T ss_dssp --GHCCHH----HHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH--HHH--
T ss_pred --hhHHHH----HHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh--HHH--
Confidence 111111 1222222 22356999999999766677777776889999999997532111 11110 011
Q ss_pred hhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCC
Q 003492 462 SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (816)
Q Consensus 462 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnG 527 (816)
...+...++.||.++++|+...+...+ .|++ .+|+.|||||
T Consensus 120 ---~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 120 ---RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp ---HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred ---HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 122567899999999999988763221 2443 6799999998
No 104
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.19 E-value=2.2e-08 Score=111.89 Aligned_cols=305 Identities=15% Similarity=0.111 Sum_probs=161.8
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCccccccccc
Q 003492 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (816)
Q Consensus 301 ~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~i 380 (816)
|||-..-.+ .++++|+++||+|. ++++...-.. .+ ++. .+..+..++.....+.. .+
T Consensus 11 TGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e~------~l--~~~-~g~~~~~~~~~~l~~~~--~~ 67 (352)
T PRK12446 11 SAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIEK------TI--IEK-ENIPYYSISSGKLRRYF--DL 67 (352)
T ss_pred cHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCcccc------cc--Ccc-cCCcEEEEeccCcCCCc--hH
Confidence 688777777 77788888999998 8875532110 11 111 12444444432211100 00
Q ss_pred ccccchhhHHHHHH---HHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhh
Q 003492 381 SRFDVWPYLETFTE---DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDE 457 (816)
Q Consensus 381 sr~~i~~yl~~f~~---~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~ 457 (816)
. .+.....+.. .+.+.+. +.+||+||++....+..+.++++.+++|+++.-.+... .
T Consensus 68 ~---~~~~~~~~~~~~~~~~~i~~---~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~------g-------- 127 (352)
T PRK12446 68 K---NIKDPFLVMKGVMDAYVRIR---KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP------G-------- 127 (352)
T ss_pred H---HHHHHHHHHHHHHHHHHHHH---hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc------c--------
Confidence 0 0111111111 1222222 45999999988777777889999999997653222110 0
Q ss_pred hhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCc
Q 003492 458 KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYS 537 (816)
Q Consensus 458 ~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~ 537 (816)
.+.++..+.++.|.++-+.... +++ ..|+.++.|-|..+...+..
T Consensus 128 --------~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~ 172 (352)
T PRK12446 128 --------LANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLKGNR 172 (352)
T ss_pred --------HHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCcccccccc
Confidence 0123456778888665432211 122 34677777766654432211
Q ss_pred hHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHH-HHHHHHhhccCCCeEEEEEeccCCCC
Q 003492 538 EKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL-VECYGKNSQLRELVNLVVVAGYIDVN 616 (816)
Q Consensus 538 ~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~L-ieA~~~l~~~~p~v~LvIVG~g~~~~ 616 (816)
... ++.+|+ ++++++|+.+|.=--.+.+..+ .+++..+. ++++++++-+..+
T Consensus 173 ~~~--------------------~~~~~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~-- 225 (352)
T PRK12446 173 EKG--------------------LAFLGF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN-- 225 (352)
T ss_pred hHH--------------------HHhcCC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch--
Confidence 111 122454 4567777777653334445333 33444443 2467666544322
Q ss_pred CCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 003492 617 KSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (816)
Q Consensus 617 ~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~ 696 (816)
.++ ....+ .++...++. .+++..+|+ +||++|.- +-+.|+.|++++|+|.|.-.
T Consensus 226 ----------~~~---~~~~~---~~~~~~~f~-----~~~m~~~~~-~adlvIsr----~G~~t~~E~~~~g~P~I~iP 279 (352)
T PRK12446 226 ----------LDD---SLQNK---EGYRQFEYV-----HGELPDILA-ITDFVISR----AGSNAIFEFLTLQKPMLLIP 279 (352)
T ss_pred ----------HHH---HHhhc---CCcEEecch-----hhhHHHHHH-hCCEEEEC----CChhHHHHHHHcCCCEEEEc
Confidence 111 11111 123334422 245778888 59999876 34789999999999999874
Q ss_pred cc-----c----cccccccCCeEEEECCC--CHHHHHHHHHHHHHhhcCCHHHHH
Q 003492 697 HG-----G----PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWK 740 (816)
Q Consensus 697 ~g-----G----~~EiI~dg~~G~li~p~--d~~~lA~~I~~~l~~l~~dp~~~~ 740 (816)
.. + ..+.+.+...|..+... +++.+++.|.++ +.|++.++
T Consensus 280 ~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~l----l~~~~~~~ 330 (352)
T PRK12446 280 LSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEEL----SHNNEKYK 330 (352)
T ss_pred CCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHH----HcCHHHHH
Confidence 32 1 22344444556665432 467777777554 47876543
No 105
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.18 E-value=6.9e-09 Score=127.10 Aligned_cols=311 Identities=13% Similarity=0.117 Sum_probs=205.4
Q ss_pred eEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHh
Q 003492 409 DFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (816)
Q Consensus 409 DIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (816)
|+|..|.....+++.++.++. ..++.+..|..++. +.++.. .-....-+..|-.||.|-..|...+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs----~eifr~--------LP~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS----SEIYKT--------LPIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC----hHHHhh--------CCcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999999988888887764 57888899975442 222211 11111234478899999999987765
Q ss_pred hhcccccccccccccccccceeeecCCCCCCC--cEEEecCCCcCCCCCCCc---hHHHHHhhhhccchhhccCcccccc
Q 003492 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMDIYFPYS---EKQKRLTALHGSIEQLLFDPEQNDE 562 (816)
Q Consensus 488 ~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~--ki~VIpnGVD~~~f~p~~---~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (816)
..-+.....-.. .....+ ...|+.+... ++.+.|-|||++.|.... +...+...+. +
T Consensus 271 ~Fl~~~~r~lgl-~~~~~~---g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~--------------~ 332 (854)
T PLN02205 271 HFLSCCSRMLGL-SYESKR---GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELI--------------K 332 (854)
T ss_pred HHHHHHHHHhCC-cccCCC---cceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHH--------------H
Confidence 332211110000 000000 0012222222 567899999988764321 1112221111 1
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCe----EEEEEeccCCCCCCcchHHHHHHHHHHHHHHHc-
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY- 637 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v----~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~- 637 (816)
.++ +.++.+|+.+.|++..||+..=+.||.++.+.+|++ .|+-+.... .+.-.+..+...++.+++.+.
T Consensus 333 ~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~ps---r~~~~~y~~~~~ev~~~v~rIN 406 (854)
T PLN02205 333 QFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPA---RGKGKDVKEVQAETHSTVKRIN 406 (854)
T ss_pred Hhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCC---CcccHHHHHHHHHHHHHHHHHH
Confidence 122 235789999999999999999999999998877764 566665432 223334445555666666553
Q ss_pred ---CCCC--cEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCC-------------------cEE
Q 003492 638 ---KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-------------------PTF 693 (816)
Q Consensus 638 ---~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~Gl-------------------PVI 693 (816)
|-.+ -|+++- ..++..++..+|+ +||+++.++..+|+-|+..|+.+|-. .+|
T Consensus 407 ~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLi 482 (854)
T PLN02205 407 ETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLV 482 (854)
T ss_pred hhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccccccccccCCCCceE
Confidence 3222 356654 3678999999999 59999999999999999999999854 377
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 694 aT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
.|...|.+..+. ..++++|.|.+++|++|.+++. ..++.++.--+..++++.+ +|....++.++.-
T Consensus 483 LSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v~~------~d~~~W~~~fl~~ 548 (854)
T PLN02205 483 VSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYVST------HDVGYWARSFLQD 548 (854)
T ss_pred eeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhh------CCHHHHHHHHHHH
Confidence 788878777773 3689999999999999998874 4666666666677777774 8988888887763
No 106
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.18 E-value=5.3e-08 Score=108.65 Aligned_cols=313 Identities=16% Similarity=0.172 Sum_probs=180.8
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHCCCc-eeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccc
Q 003492 301 TGGQVVYILDQVRALENEMLLRIKRQGLD-ISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (816)
Q Consensus 301 ~GG~~vyvld~~raL~~eLa~~L~~~Ghe-V~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~ 379 (816)
|||-....+ .++++|.++|++ |. ++... +. .. +......++.+..++.....
T Consensus 10 TGGHv~pAl--------Al~~~l~~~g~~~v~----~~~~~--~~----~e---~~l~~~~~~~~~~I~~~~~~------ 62 (357)
T COG0707 10 TGGHVFPAL--------ALAEELAKRGWEQVI----VLGTG--DG----LE---AFLVKQYGIEFELIPSGGLR------ 62 (357)
T ss_pred CccchhHHH--------HHHHHHHhhCccEEE----Eeccc--cc----ce---eeeccccCceEEEEeccccc------
Confidence 677776666 788889999996 43 44221 11 01 11111224566666655421
Q ss_pred cccccchhh------HHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhh
Q 003492 380 ISRFDVWPY------LETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWK 453 (816)
Q Consensus 380 isr~~i~~y------l~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~ 453 (816)
+...+.. +......+.+.+. +.+||+|.+........+.++++.+|+|+++...+.-. ...|+
T Consensus 63 --~~~~~~~~~~~~~~~~~~~~a~~il~---~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank 131 (357)
T COG0707 63 --RKGSLKLLKAPFKLLKGVLQARKILK---KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK 131 (357)
T ss_pred --ccCcHHHHHHHHHHHHHHHHHHHHHH---HcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH
Confidence 1122221 1112222333333 34999999988888788889999999998875554322 12232
Q ss_pred hhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCC
Q 003492 454 KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (816)
Q Consensus 454 ~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f 533 (816)
+..+.|+.|.+.-... . .+++ +.++.++.|-+..+..
T Consensus 132 ----------------~~~~~a~~V~~~f~~~-~------------------------~~~~--~~~~~~tG~Pvr~~~~ 168 (357)
T COG0707 132 ----------------ILSKFAKKVASAFPKL-E------------------------AGVK--PENVVVTGIPVRPEFE 168 (357)
T ss_pred ----------------HhHHhhceeeeccccc-c------------------------ccCC--CCceEEecCcccHHhh
Confidence 2334556554433211 0 1122 4467778877776554
Q ss_pred CCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHH-HHhhccCCCeEEEEEecc
Q 003492 534 FPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY-GKNSQLRELVNLVVVAGY 612 (816)
Q Consensus 534 ~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~-~~l~~~~p~v~LvIVG~g 612 (816)
. ......+. .+ ..++++|+.+|.=--.+.+..++... ..+.+ +++++...+.
T Consensus 169 ~-~~~~~~~~--------------------~~---~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~---~~~v~~~~G~ 221 (357)
T COG0707 169 E-LPAAEVRK--------------------DG---RLDKKTILVTGGSQGAKALNDLVPEALAKLAN---RIQVIHQTGK 221 (357)
T ss_pred c-cchhhhhh--------------------hc---cCCCcEEEEECCcchhHHHHHHHHHHHHHhhh---CeEEEEEcCc
Confidence 3 22211111 11 12677777777533333344444333 33332 5676666654
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcE
Q 003492 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (816)
Q Consensus 613 ~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPV 692 (816)
.. .++++..-.+++. ++..++.. ++..+|+ +||++|.=+ -++|+.|..++|+|+
T Consensus 222 ~~------------~~~~~~~~~~~~~---~~v~~f~~------dm~~~~~-~ADLvIsRa----Ga~Ti~E~~a~g~P~ 275 (357)
T COG0707 222 ND------------LEELKSAYNELGV---VRVLPFID------DMAALLA-AADLVISRA----GALTIAELLALGVPA 275 (357)
T ss_pred ch------------HHHHHHHHhhcCc---EEEeeHHh------hHHHHHH-hccEEEeCC----cccHHHHHHHhCCCE
Confidence 32 3344444444443 77776433 4888888 599999763 478999999999999
Q ss_pred EEcCcccc--------ccccccCCeEEEECCCC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003492 693 FATCHGGP--------AEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (816)
Q Consensus 693 IaT~~gG~--------~EiI~dg~~G~li~p~d--~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~ 751 (816)
|--..+.. +..+++...|..++..+ ++.+++.|.+++ ++|+..++|++++++...
T Consensus 276 IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~~ 340 (357)
T COG0707 276 ILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL----SNPEKLKAMAENAKKLGK 340 (357)
T ss_pred EEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcCC
Confidence 98654432 33445555677776544 778888886555 899999999999987765
No 107
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.14 E-value=1.6e-08 Score=115.29 Aligned_cols=321 Identities=14% Similarity=0.115 Sum_probs=206.1
Q ss_pred HHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhh
Q 003492 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (816)
Q Consensus 396 ~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~ 474 (816)
....+.+..+ .=|+|..|.....+++..+..+. ..++.+..|..+++. .+... + -+...-.-.+-.
T Consensus 137 FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPss----Evfr~-l-------P~r~eIl~gll~ 203 (486)
T COG0380 137 FADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS----EVFRC-L-------PWREEILEGLLG 203 (486)
T ss_pred HHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCH----HHHhh-C-------chHHHHHHHhhc
Confidence 3334444333 34999999999888888887765 466778889765432 21111 0 011112336778
Q ss_pred CCEEEecCHHHHhhhcccccccccccccccccceee-ecCCCCCCCcEEEecCCCcCCCCCCCchHH---HHHhhhhccc
Q 003492 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV-VHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (816)
Q Consensus 475 AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~-~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~---~rl~~~~~~i 550 (816)
||.|-..++..+...-+...+.-.. + +.-.+ ..|.+...-++..+|=|||...|....... .+... +
T Consensus 204 ~dligFqt~~y~~nF~~~~~r~~~~---~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~e----l 274 (486)
T COG0380 204 ADLIGFQTESYARNFLDLCSRLLGV---T--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLE----L 274 (486)
T ss_pred CCeeEecCHHHHHHHHHHHHHhccc---c--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHH----H
Confidence 9999998887665332222111000 0 00001 111110123566789999987664322111 11111 0
Q ss_pred hhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCCcchHHHHH
Q 003492 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (816)
Q Consensus 551 ~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~----v~LvIVG~g~~~~~~~d~e~~~~ 626 (816)
.+ .+ ..++.+|+.+.|++..||+..=+.||.++.+.+|. +.|+-++.... ..-++....
T Consensus 275 ~~----------~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~ 337 (486)
T COG0380 275 KA----------EL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQAL 337 (486)
T ss_pred HH----------Hh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHH
Confidence 11 11 23478999999999999999999999999877664 56777765543 111222234
Q ss_pred HHHHHHHHHHcC-CCCc-----EEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHc----CCcEEEcC
Q 003492 627 IEKMHELMKTYK-LDGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC----GLPTFATC 696 (816)
Q Consensus 627 ~~~l~~li~~~~-L~~~-----V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~----GlPVIaT~ 696 (816)
..++.+++.+.+ .-+. |.++- ..++..+++.++. .+|+++..++.+|..++..|+.+| +-|.|-|.
T Consensus 338 ~~~i~~~V~rIN~~fG~~~~~Pv~~l~---~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSe 413 (486)
T COG0380 338 RLQIEELVGRINGEFGSLSWTPVHYLH---RDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSE 413 (486)
T ss_pred HHHHHHHHHHHHhhcCCCCcceeEEEe---ccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEec
Confidence 444555544431 1222 44443 3578899999999 599999999999999999999998 45888888
Q ss_pred ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 697 HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 697 ~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
..|.+..+.+ .++++|.|.+++|++|..++. ..++.+++.-+..++.+.+ +|....+..++.-
T Consensus 414 FaGaa~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v~~------~d~~~W~~~fl~~ 476 (486)
T COG0380 414 FAGAASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQVLT------HDVARWANSFLDD 476 (486)
T ss_pred cccchhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHH
Confidence 8888887754 689999999999999998774 6777777777778888875 8888888887663
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.09 E-value=1.6e-08 Score=115.68 Aligned_cols=145 Identities=12% Similarity=0.132 Sum_probs=113.5
Q ss_pred CcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003492 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (816)
+.-+++++. +..+++++++.+..|+++|-| |.+.+ ...+|.++ .++ ++.+.+.|...
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~- 338 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT- 338 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-
Confidence 344666662 999999999999999999999 65543 12577777 777 56677776332
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~-gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~ 730 (816)
..+-..+. .||+++..|..|+|++++.||++.|+|+|+.+. -|+.+++.+ |.+++.+|+++|+++|.+++
T Consensus 339 ----~~l~~ly~-~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL- 409 (438)
T TIGR02919 339 ----QKIQELYQ-TCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL- 409 (438)
T ss_pred ----HHHHHHHH-hccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh-
Confidence 34556666 499999999999999999999999999999854 467788866 78999999999999997765
Q ss_pred hhcCCHHHHHHHHHHHHHHHH
Q 003492 731 KCKENPSHWKKISDGGLKRIY 751 (816)
Q Consensus 731 ~l~~dp~~~~~ms~~ar~~~~ 751 (816)
+||+.+++.-..-++.+.
T Consensus 410 ---~d~~~~~~~~~~q~~~a~ 427 (438)
T TIGR02919 410 ---NDPNQFRELLEQQREHAN 427 (438)
T ss_pred ---cCHHHHHHHHHHHHHHhc
Confidence 899877776555555554
No 109
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.01 E-value=1.5e-07 Score=106.32 Aligned_cols=123 Identities=15% Similarity=0.049 Sum_probs=79.8
Q ss_pred CCCcEEEEEeccCC---CCCHHHHHHHHHHhhccCCCeEEE-EEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003492 570 RSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (816)
Q Consensus 570 ~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~p~v~Lv-IVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (816)
.+++++++.|.... .+-...+++++... +.+++ .+|.... . . ..++++|.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~------------~-~-------~~~~~~v~~ 292 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL------------G-A-------EDLPDNVRV 292 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc------------c-c-------cCCCCceEE
Confidence 44567788888754 23344455555543 34544 4454433 0 0 245678999
Q ss_pred eccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEECCC--CHH
Q 003492 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPD 719 (816)
Q Consensus 646 lG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG----~~EiI~dg~~G~li~p~--d~~ 719 (816)
.+ .++..+++. .+|++|.- |-..|+.||+++|+|+|.....+ ..+.+.....|..+++. +++
T Consensus 293 ~~----~~p~~~ll~----~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWLLP----RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHHhh----hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 566666544 59999954 33479999999999999986554 34555566678777665 678
Q ss_pred HHHHHHHHHH
Q 003492 720 QAAELMADFF 729 (816)
Q Consensus 720 ~lA~~I~~~l 729 (816)
++++++.+++
T Consensus 361 ~l~~al~~~l 370 (401)
T cd03784 361 RLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHh
Confidence 8888886554
No 110
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.92 E-value=4.3e-08 Score=99.12 Aligned_cols=181 Identities=18% Similarity=0.149 Sum_probs=115.8
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g 358 (816)
.||+||...|.|. ..||.|+++. +|+.+|+++||+|+ |.|+...... .. ..
T Consensus 2 kkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~~---~~ 52 (185)
T PF09314_consen 2 KKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------KE---FE 52 (185)
T ss_pred ceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------CC---cc
Confidence 5899999999875 3699999999 89999999999999 9988632211 11 12
Q ss_pred CCceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCC-chHHHHHHHHH--cCCcEEE
Q 003492 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYK--MGITQCT 435 (816)
Q Consensus 359 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~-~~lva~lla~~--~gip~v~ 435 (816)
-.|+++..+|.... |. .....|--.....++..... -+.+.||||.+... ++++..++.+. .|.|+++
T Consensus 53 y~gv~l~~i~~~~~-g~-------~~si~yd~~sl~~al~~~~~-~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~v 123 (185)
T PF09314_consen 53 YNGVRLVYIPAPKN-GS-------AESIIYDFLSLLHALRFIKQ-DKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVV 123 (185)
T ss_pred cCCeEEEEeCCCCC-Cc-------hHHHHHHHHHHHHHHHHHhh-ccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEE
Confidence 23688999887643 21 11111110011111111111 12357899987776 55555555543 4779999
Q ss_pred EecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCC
Q 003492 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (816)
Q Consensus 436 t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~ 515 (816)
.+|++|.. ..+|..+.++|. ...|.++.+.||.+|+-|....+..++.. +
T Consensus 124 N~DGlEWk-----R~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~y-------------------~-- 173 (185)
T PF09314_consen 124 NMDGLEWK-----RAKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKERY-------------------G-- 173 (185)
T ss_pred CCCcchhh-----hhhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHHc-------------------C--
Confidence 99998753 235665555443 23578899999999999988765433221 1
Q ss_pred CCCCcEEEecCCCc
Q 003492 516 VFDPKFNIVSPGAD 529 (816)
Q Consensus 516 ~f~~ki~VIpnGVD 529 (816)
..+..+||+|.|
T Consensus 174 --~~~s~~IaYGad 185 (185)
T PF09314_consen 174 --RKKSTFIAYGAD 185 (185)
T ss_pred --CCCcEEecCCCC
Confidence 367889999987
No 111
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.90 E-value=1.8e-06 Score=97.66 Aligned_cols=111 Identities=17% Similarity=0.187 Sum_probs=73.4
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEEC
Q 003492 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHID 714 (816)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG----~~EiI~dg~~G~li~ 714 (816)
+.++|.+.+ .++..+ ++. .+|++|..+ | ..|+.||+++|+|+|+....+ ..+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457898888 555544 455 599999764 2 248999999999999974443 333455556777776
Q ss_pred CC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 715 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 715 p~--d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
.. ++++++++|.+++ .|++.++.+.+- ++.+.+ .-.-+..++.++++
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l-~~~~~~-----~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM-RAEIRE-----AGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH-HHHHHH-----cCCHHHHHHHHHHh
Confidence 43 5678888886555 888876666443 333344 45666666666554
No 112
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.88 E-value=5.4e-09 Score=110.98 Aligned_cols=183 Identities=14% Similarity=0.112 Sum_probs=101.2
Q ss_pred eEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCcc-Cccceee--
Q 003492 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERV-- 356 (816)
Q Consensus 280 rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~-~~~~e~v-- 356 (816)
||++||....| .-.+||...++- .|+++|+++||+|. |+++.++....... .......
T Consensus 1 kIl~vt~E~~P-------~~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAP-------FAKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTT-------TB-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCc-------ccccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 79999987763 246899999999 67777899999999 99887532211100 0000000
Q ss_pred --------c----------CCCceEEEEecCCCcccccccccccccch--------hhHHHHH--HHHHHHHHHHhCCCc
Q 003492 357 --------S----------GTEHTHILRVPFRSEKGILRQWISRFDVW--------PYLETFT--EDVGSEITAELQGFP 408 (816)
Q Consensus 357 --------~----------g~~~v~I~rvp~~~~~~~~~~~isr~~i~--------~yl~~f~--~~~~~~i~~~l~~kP 408 (816)
. ..+++.++-+.... +.+|..++ .-.++|+ ..+..++...++.+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0 01234443332211 11222232 1122222 223233333345699
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCCcccCCCC------hhhhhh--hhhhhhchhhhhHHHHHHh
Q 003492 409 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDS------DIYWKK--FDEKYHFSCQFTADLIAMN 473 (816)
Q Consensus 409 DIIh~h~~~~~lva~lla~~~-------gip~v~t~H~l~~~k~~~~------~~~~~~--~~~~y~f~~~~~~e~~a~~ 473 (816)
||||+|.|.+++++.+++... ++|+|+|+|+++....... .+.+.. ....+.+.......+.++.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999998875 5999999999765432211 111111 1122333445566778999
Q ss_pred hCCEEEecCHHHHhh
Q 003492 474 NADFIITSTYQEIAG 488 (816)
Q Consensus 474 ~AD~IIt~S~~~~~~ 488 (816)
.||.|+|+|+..+..
T Consensus 215 ~AD~v~TVS~~Ya~E 229 (245)
T PF08323_consen 215 YADKVTTVSPTYARE 229 (245)
T ss_dssp HSSEEEESSHHHHHH
T ss_pred hcCEeeeCCHHHHHH
Confidence 999999999988764
No 113
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.81 E-value=3.1e-06 Score=96.23 Aligned_cols=165 Identities=14% Similarity=0.235 Sum_probs=105.9
Q ss_pred CCcEEEEE-ecc--CCCCCHHHHHHHHHHhhccCCCeEEEEEe-ccCCCCCCcchHHHHHHHHHHHHHHHcCCC------
Q 003492 571 SKPIVFSM-ARL--DHVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKLD------ 640 (816)
Q Consensus 571 ~k~iIl~v-GRL--~~~Kgl~~LieA~~~l~~~~p~v~LvIVG-~g~~~~~~~d~e~~~~~~~l~~li~~~~L~------ 640 (816)
++++|+.+ |.- ...+++..+++++..+.+. +++++++.- ++.. .+.+++...+.+..
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~ 270 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSE 270 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCcc
Confidence 34454444 433 2356788999999999765 778887765 3333 34455555544442
Q ss_pred --------CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc---cccccc---
Q 003492 641 --------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEH--- 706 (816)
Q Consensus 641 --------~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~---~EiI~d--- 706 (816)
+++.+..+ ..+++.+++ +||++|..| |.+..|++++|+|+|.....+. ..+.+.
T Consensus 271 ~~~~~~~~~~~~v~~~------~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~ 338 (396)
T TIGR03492 271 DQTSLFQKGTLEVLLG------RGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSR 338 (396)
T ss_pred ccchhhccCceEEEec------hHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHh
Confidence 22455431 245778888 599999885 5566999999999999864433 222232
Q ss_pred --CCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 707 --GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 707 --g~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
| .+..+...+++.+++.+.+++ .|++.+++|.++++++..+ ....+.+++.+.+
T Consensus 339 l~g-~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~lg~-----~~a~~~ia~~i~~ 394 (396)
T TIGR03492 339 LLG-GSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQERMGP-----PGASARIAESILK 394 (396)
T ss_pred hcC-CEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHhcCC-----CCHHHHHHHHHHH
Confidence 3 344555667888888886554 8999998888666655544 4566666655544
No 114
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.73 E-value=1.2e-06 Score=95.69 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=79.4
Q ss_pred CCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003492 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (816)
+.+.+++++|..+.. .++++++.+ ++.+++++|.... + .-.++|++.++
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------------~--~~~~ni~~~~~- 239 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------------D--PRPGNIHVRPF- 239 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------------c--ccCCCEEEeec-
Confidence 345688999988765 666776664 4678999976632 0 01578998863
Q ss_pred cCcCChHHHHHHHHccccEEEECCCCCCCcH-HHHHHHHcCCcEEEcCcccccc------ccccCCeEEEECCC--CHHH
Q 003492 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGL-TVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHIDPY--HPDQ 720 (816)
Q Consensus 650 ~~~v~~~el~~~la~aaDvfV~PS~~EgFGl-tvlEAMA~GlPVIaT~~gG~~E------iI~dg~~G~li~p~--d~~~ 720 (816)
...++.++|+. ||++|.-+ |. |+.||+++|+|++.-...+..| .++.-..|..+++. +++.
T Consensus 240 ----~~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 240 ----STPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred ----ChHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 33578889995 99999763 44 4999999999999987655433 34445567666533 5677
Q ss_pred HHHHH
Q 003492 721 AAELM 725 (816)
Q Consensus 721 lA~~I 725 (816)
+++.|
T Consensus 310 l~~~l 314 (318)
T PF13528_consen 310 LAEFL 314 (318)
T ss_pred HHHHH
Confidence 77666
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.70 E-value=3.8e-06 Score=94.44 Aligned_cols=266 Identities=17% Similarity=0.178 Sum_probs=149.0
Q ss_pred CCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHH
Q 003492 406 GFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (816)
Q Consensus 406 ~kPDIIh~h~~-~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (816)
.+||+|.++.. ...+.++++|..+++|+++..-++ .+... .+... ....-+-|+..+++++.
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~-rs~~~--------~eE~~--------r~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGE-VTEGA--------IDESI--------RHAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCc-cCCCC--------chHHH--------HHHHHHHHhhccCCCHH
Confidence 38999998884 457888999999999987543332 11100 01110 11223446777777776
Q ss_pred HHhhhcccccccccccccccccceeeecCCCCCCCcEEEe-cCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccc
Q 003492 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (816)
Q Consensus 485 ~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VI-pnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (816)
..+.. ...|++ ..++.++ .+++|.-.......... ..+.
T Consensus 155 ~~~~L--------------------~~eg~~--~~~i~~tG~~~iD~l~~~~~~~~~~------------------~~~~ 194 (365)
T TIGR03568 155 YRQRV--------------------IQMGED--PDRVFNVGSPGLDNILSLDLLSKEE------------------LEEK 194 (365)
T ss_pred HHHHH--------------------HHcCCC--CCcEEEECCcHHHHHHhhhccCHHH------------------HHHH
Confidence 55411 112443 4566666 44666432211111111 1123
Q ss_pred cCCCCCCCCcE-EEEEeccC--CCCCHHHHHHHHHHhhccCCCeEEEEEe--ccCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003492 564 VGTLSDRSKPI-VFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA--GYIDVNKSKDREEIAEIEKMHELMKTYK 638 (816)
Q Consensus 564 lg~l~~~~k~i-Il~vGRL~--~~Kgl~~LieA~~~l~~~~p~v~LvIVG--~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (816)
+|+ +.++++ ++.+-|-. .....+.+.+.+..+.+...++ +++. .++. +....+.+.++...
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~--------~~~i~~~i~~~~~~-- 260 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAG--------SRIINEAIEEYVNE-- 260 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCC--------chHHHHHHHHHhcC--
Confidence 555 333344 34454432 3333344444444444332234 4443 2222 11112333333211
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003492 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (816)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~ 718 (816)
.++|++++ +.+..++..+++. |+++|--|. | .+.||.++|+|||+ .|.-.|.+..|.+++++ +.|+
T Consensus 261 -~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~ 326 (365)
T TIGR03568 261 -HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDK 326 (365)
T ss_pred -CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCH
Confidence 46799998 7889999999995 999995542 2 34899999999995 56788888888888888 5589
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHH
Q 003492 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTL 771 (816)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~l 771 (816)
+++.+++.++ .+++.++.+ ..... .|.....++++.++
T Consensus 327 ~~I~~a~~~~-----~~~~~~~~~-----~~~~~-----pygdg~as~rI~~~ 364 (365)
T TIGR03568 327 EEIVKAIEKL-----LDPAFKKSL-----KNVKN-----PYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHHHH-----hChHHHHHH-----hhCCC-----CCCCChHHHHHHHh
Confidence 9999888653 344433332 22233 57777777777653
No 116
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.64 E-value=3.9e-05 Score=85.64 Aligned_cols=264 Identities=16% Similarity=0.176 Sum_probs=163.2
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHH
Q 003492 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (816)
Q Consensus 407 kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (816)
+||+++.--+.....-..-+++.|+|++..---+.. .|-..|+.+.. .-...+...|.|++-|+...
T Consensus 123 ~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~----rS~~~y~k~~~---------~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 123 RPKLLIIMETELWPNLINELKRRGIPLVLVNARLSD----RSFARYAKLKF---------LARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeech----hhhHHHHHHHH---------HHHHHHHhcceeeecCHHHH
Confidence 899988766655444455667889998753221110 11112222211 12346778999999998876
Q ss_pred hhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCC
Q 003492 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (816)
Q Consensus 487 ~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~ 566 (816)
+. |.+ -|+ +++.+.-| +-.+.- |..........+ +.+++
T Consensus 190 ~R-------f~~-------------LGa----~~v~v~GN-lKfd~~-~~~~~~~~~~~~--------------r~~l~- 228 (419)
T COG1519 190 QR-------FRS-------------LGA----KPVVVTGN-LKFDIE-PPPQLAAELAAL--------------RRQLG- 228 (419)
T ss_pred HH-------HHh-------------cCC----cceEEecc-eeecCC-CChhhHHHHHHH--------------HHhcC-
Confidence 62 211 132 12333333 111110 111111111111 12233
Q ss_pred CCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCC-----
Q 003492 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG----- 641 (816)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~----- 641 (816)
..+++++..+. ...--+.+++++..+++.+|+..+++|=-.++ -.+..++++++.|+.-
T Consensus 229 ---~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 229 ---GHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred ---CCCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeecC
Confidence 22677777776 22333558899999999999999999987765 3678888899887731
Q ss_pred -------cEEEeccccCcCChHHHHHHHHccccE-EEECCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCCe
Q 003492 642 -------QFRWIAAQTNRARNGELYRYIADTKGA-FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGAS 709 (816)
Q Consensus 642 -------~V~flG~~~~~v~~~el~~~la~aaDv-fV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~dg~~ 709 (816)
.=.++| ...+|+..+|. .+|+ ||--|+.+--|--.+|+.++|+|||.- +...+.+-+.....
T Consensus 293 ~~~~~~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga 366 (419)
T COG1519 293 GDPPFSDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGA 366 (419)
T ss_pred CCCCCCCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCC
Confidence 012333 24689999998 5886 666677766678899999999999986 33334444445556
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 710 G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
|+.++ |.+.+++++ +.+..|++.++++++++...+.+
T Consensus 367 ~~~v~--~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 367 GLQVE--DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred eEEEC--CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHH
Confidence 88887 566666666 44558899999999999999876
No 117
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.63 E-value=7.5e-07 Score=85.23 Aligned_cols=123 Identities=20% Similarity=0.197 Sum_probs=77.8
Q ss_pred HHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccccccchhhHHHHHHHHH
Q 003492 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (816)
Q Consensus 318 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~ 397 (816)
.+++.|+++|++|+ ++|..... +.....+++.+.+++.... ...+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 66777899999999 99863211 1111123678888764421 1344442 22 343
Q ss_pred HHHHHHhCCCceEEEEcCCCc-hHHHHHHHHHcC-CcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhC
Q 003492 398 SEITAELQGFPDFIIGNYSDG-NLVASLLAYKMG-ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (816)
Q Consensus 398 ~~i~~~l~~kPDIIh~h~~~~-~lva~lla~~~g-ip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~A 475 (816)
+.+. +.+||+||+|...+ ++++.++++..+ +|++++.|+........ ..+ .+. .....+++.|
T Consensus 68 k~ik---~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~~~---~~~----~~~-----~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIK---KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNSSK---KKK----LKK-----FIIKFAFKRA 132 (139)
T ss_pred HHhc---cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecCCc---hHH----HHH-----HHHHHHHHhC
Confidence 3333 34899999999887 788888889888 99999999864422111 110 011 1244688999
Q ss_pred CEEEecC
Q 003492 476 DFIITST 482 (816)
Q Consensus 476 D~IIt~S 482 (816)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 118
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.45 E-value=3.2e-05 Score=85.27 Aligned_cols=69 Identities=13% Similarity=0.090 Sum_probs=51.3
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCCeEEEE
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHI 713 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~E------iI~dg~~G~li 713 (816)
.+++.+.+ ..+ .++..+++. ||++|.-+- ..|+.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~----~~~-~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRR----ITT-DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEE----CCh-HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 46788887 333 578888885 999998752 247999999999999987765433 45566678888
Q ss_pred CCCCH
Q 003492 714 DPYHP 718 (816)
Q Consensus 714 ~p~d~ 718 (816)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 76666
No 119
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.36 E-value=1.2e-05 Score=92.11 Aligned_cols=186 Identities=13% Similarity=0.106 Sum_probs=120.3
Q ss_pred ccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003492 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (816)
Q Consensus 559 ~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (816)
..|..+|+ +.+..++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+.+.+.++|
T Consensus 274 ~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~G 338 (468)
T PF13844_consen 274 TTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAHG 338 (468)
T ss_dssp EETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHTT
T ss_pred cCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHcC
Confidence 45678998 5667677777776 4566888999999998899999999875432 1357788888999
Q ss_pred CC-CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc-----ccc-cCCeEE
Q 003492 639 LD-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE-----IIE-HGASGF 711 (816)
Q Consensus 639 L~-~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~E-----iI~-dg~~G~ 711 (816)
+. ++|.|.+ ..+..+..+.+.. +|+++=|-.+- -|.|.+||+.+|+|||+-.-...+. ++. -|-.-+
T Consensus 339 v~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~n-G~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El 412 (468)
T PF13844_consen 339 VDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYN-GGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL 412 (468)
T ss_dssp S-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG
T ss_pred CChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCC-CcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh
Confidence 96 7899988 5566777777774 99999885443 3789999999999999864222221 111 122223
Q ss_pred EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 712 li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
+.. |.++..+.-.++ .+|++.++.+.++-++...+ -+-|+-..+++.+++.|+.
T Consensus 413 IA~--s~~eYv~~Av~L----a~D~~~l~~lR~~Lr~~~~~---SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 413 IAD--SEEEYVEIAVRL----ATDPERLRALRAKLRDRRSK---SPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp B-S--SHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHH---SGGG-HHHHHHHHHHHHHH
T ss_pred cCC--CHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHhh---CCCCCHHHHHHHHHHHHHH
Confidence 333 788887777554 48999999999998887754 1258999999999998864
No 120
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.31 E-value=0.0012 Score=77.70 Aligned_cols=160 Identities=13% Similarity=-0.060 Sum_probs=99.3
Q ss_pred CcEEEEEeccCCC-----CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003492 572 KPIVFSMARLDHV-----KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (816)
Q Consensus 572 k~iIl~vGRL~~~-----Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 646 (816)
.+++++.|..... +-+..+++|++++. .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4678889987532 23455566665543 46666655432 00 2457889988
Q ss_pred ccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCCeEEEECCC--CHHH
Q 003492 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHGASGFHIDPY--HPDQ 720 (816)
Q Consensus 647 G~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~----gG~~EiI~dg~~G~li~p~--d~~~ 720 (816)
+ +++..++... . .+++||.- |-..++.||+.+|+|+|+-.. ...+..++.-+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 7 6777666531 1 37888865 334589999999999999743 3345555556678888754 4567
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
+.++|.++ ++||.+++...+-+.....+ ..+-..-+-.+.+-.-..
T Consensus 422 l~~ai~~v----l~~~~y~~~a~~ls~~~~~~-----p~~~~~~av~~iE~v~r~ 467 (507)
T PHA03392 422 LVLAIVDV----IENPKYRKNLKELRHLIRHQ-----PMTPLHKAIWYTEHVIRN 467 (507)
T ss_pred HHHHHHHH----hCCHHHHHHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHhC
Confidence 77777554 48998877766655554444 444444444555433333
No 121
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.17 E-value=0.00025 Score=76.84 Aligned_cols=97 Identities=14% Similarity=0.254 Sum_probs=70.0
Q ss_pred CcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEE-EEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003492 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNL-VVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~L-vIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (816)
+.+++++|..++.+....+++++.++. +++++ +|+|.+.. ..+++++.++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 457899999998776667788887653 34444 35566543 134566666553 47888873
Q ss_pred CcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003492 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH 697 (816)
Q Consensus 651 ~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~ 697 (816)
..++..+|+. ||++|.+ .|.|+.|++++|+|+|+-..
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3468888985 9999985 57999999999999998654
No 122
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.14 E-value=0.00016 Score=80.78 Aligned_cols=251 Identities=16% Similarity=0.211 Sum_probs=133.6
Q ss_pred CceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHH
Q 003492 407 FPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (816)
Q Consensus 407 kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (816)
+||+|..+.-.. .+.++++|..+++|++.+.-++-......+ ..+...+ ...-+-|+.-+++|+..
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g-----~~de~~R--------~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEG-----MPDEINR--------HAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TTSS-----TTHHHHH--------HHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccCCC-----Cchhhhh--------hhhhhhhhhhccCCHHH
Confidence 899999887554 677899999999996654443321111100 1112111 12334688999999877
Q ss_pred HhhhcccccccccccccccccceeeecCCCCCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhccchhhccCcccccccc
Q 003492 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (816)
Q Consensus 486 ~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpn-GVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 564 (816)
.+.. ...|++ +.++.++-| ++|.- ........+... ..
T Consensus 134 ~~~L--------------------~~~G~~--~~rI~~vG~~~~D~l--------~~~~~~~~~~~~-----------~~ 172 (346)
T PF02350_consen 134 RERL--------------------LQEGEP--PERIFVVGNPGIDAL--------LQNKEEIEEKYK-----------NS 172 (346)
T ss_dssp HHHH--------------------HHTT----GGGEEE---HHHHHH--------HHHHHTTCC-HH-----------HH
T ss_pred HHHH--------------------HhcCCC--CCeEEEEChHHHHHH--------HHhHHHHhhhhh-----------hH
Confidence 6522 123554 668888754 33321 000000000000 00
Q ss_pred CCCCCCCCcE-EEEEeccCC---CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003492 565 GTLSDRSKPI-VFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (816)
Q Consensus 565 g~l~~~~k~i-Il~vGRL~~---~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (816)
++..+..+++ +++.=|... ......+.+++..+.+. +++++++.....+ .....+.+...++
T Consensus 173 ~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~~~--- 238 (346)
T PF02350_consen 173 GILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLKKY--- 238 (346)
T ss_dssp HHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHTT----
T ss_pred HHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhccc---
Confidence 2111233444 444434332 24467888888888776 7888988887543 2244455545544
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCCeEEEECCCCH
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV-EAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHP 718 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvl-EAMA~GlPVIaT-~~gG~~EiI~dg~~G~li~p~d~ 718 (816)
++++++. .....++..+++. |+++|-=| | .+. ||.++|+|||.- +.|.-.+.+..+.+-+ +. .|+
T Consensus 239 ~~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~ 305 (346)
T PF02350_consen 239 DNVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDP 305 (346)
T ss_dssp TTEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSH
T ss_pred CCEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCH
Confidence 3899998 7888999999995 88887543 6 687 999999999998 5566667776666555 76 699
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHH
Q 003492 719 DQAAELMADFFGKCKENPSHWKKI 742 (816)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~m 742 (816)
+++.++|.+++ .+++.+.++
T Consensus 306 ~~I~~ai~~~l----~~~~~~~~~ 325 (346)
T PF02350_consen 306 EAIIQAIEKAL----SDKDFYRKL 325 (346)
T ss_dssp HHHHHHHHHHH----H-HHHHHHH
T ss_pred HHHHHHHHHHH----hChHHHHhh
Confidence 99999997665 454444443
No 123
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=98.00 E-value=0.00024 Score=81.15 Aligned_cols=158 Identities=15% Similarity=0.080 Sum_probs=102.8
Q ss_pred CCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003492 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (816)
+.+++.++.|..... .+.+-.+.+.+.+. ++++++..++.+ . ..-++++++...+
T Consensus 236 d~~~vyvslGt~~~~--~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~-- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA--VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD-- 290 (406)
T ss_pred CCCeEEEEcCCcccH--HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec--
Confidence 345556677776544 33333333333333 567777765522 0 2236778888887
Q ss_pred cCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCCeEEEEC--CCCHHHHHH
Q 003492 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHID--PYHPDQAAE 723 (816)
Q Consensus 650 ~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~g----G~~EiI~dg~~G~li~--p~d~~~lA~ 723 (816)
.++..++.. .+|++|+. -|+ .|+.||+..|+|+|+--.+ ..++.+++-..|..++ .-+.+.+++
T Consensus 291 --~~p~~~~l~----~ad~vI~h---GG~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~ 360 (406)
T COG1819 291 --YVPQLELLP----RADAVIHH---GGA-GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRA 360 (406)
T ss_pred --CCCHHHHhh----hcCEEEec---CCc-chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHH
Confidence 777777555 69999998 343 4789999999999996433 3566677778898877 578899999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHH
Q 003492 724 LMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLA 772 (816)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly 772 (816)
+|.+++ .|+..++...+..... .+ .-.-+..++.++++.
T Consensus 361 av~~vL----~~~~~~~~~~~~~~~~-~~-----~~g~~~~a~~le~~~ 399 (406)
T COG1819 361 AVNEVL----ADDSYRRAAERLAEEF-KE-----EDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHh----cCHHHHHHHHHHHHHh-hh-----cccHHHHHHHHHHHH
Confidence 996655 8888766655444433 33 355555666665543
No 124
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.96 E-value=0.0015 Score=72.56 Aligned_cols=60 Identities=17% Similarity=0.228 Sum_probs=42.9
Q ss_pred HHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc---cccccccCCeEEEECCCCHHHHHHHHHH
Q 003492 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG---PAEIIEHGASGFHIDPYHPDQAAELMAD 727 (816)
Q Consensus 660 ~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG---~~EiI~dg~~G~li~p~d~~~lA~~I~~ 727 (816)
.+++ -||++|- +-|....||...|+|+|.+..|- .-+.+. +.|+++...|++++.+.+..
T Consensus 244 ~Ll~-~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 244 DLLY-YADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRK 306 (335)
T ss_pred HHHH-hcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHH
Confidence 4555 3889994 34777899999999999875442 223332 34788888899998886644
No 125
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.91 E-value=0.015 Score=67.67 Aligned_cols=139 Identities=13% Similarity=0.131 Sum_probs=77.7
Q ss_pred CCcEEEEEeccCC--CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003492 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (816)
Q Consensus 571 ~k~iIl~vGRL~~--~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (816)
+..+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~- 329 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP- 329 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec-
Confidence 4467778887643 12244444454433 457777655321 0111111 24566666
Q ss_pred ccCcCChHHHHHHHHccccE--EEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-CeEEEECC------
Q 003492 649 QTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-ASGFHIDP------ 715 (816)
Q Consensus 649 ~~~~v~~~el~~~la~aaDv--fV~PS~~EgFGltvlEAMA~GlPVIaT~----~gG~~EiI~dg-~~G~li~p------ 715 (816)
+++..++.. ..++ ||.- +--.+++||+++|+|+|+-. .......+.+. +.|+-+..
T Consensus 330 ---w~pQ~~iL~----h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 330 ---WCDQLKVLC----HSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred ---cCCHHHHhc----cCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 677777665 2444 6643 22358999999999999964 33444555442 45666531
Q ss_pred -CCHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHHH
Q 003492 716 -YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 748 (816)
Q Consensus 716 -~d~~~lA~~I~~~l~~l~~dp-~~~~~ms~~ar~ 748 (816)
-+.+++++++.+++ .|+ +..++|.+++.+
T Consensus 399 ~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 399 LVGREEIAELVKRFM----DLESEEGKEMRRRAKE 429 (459)
T ss_pred cCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 25678888886655 554 334445444443
No 126
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.88 E-value=0.0023 Score=72.01 Aligned_cols=145 Identities=23% Similarity=0.293 Sum_probs=90.4
Q ss_pred CCCCcEE-EEEe-ccCC-CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003492 569 DRSKPIV-FSMA-RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (816)
Q Consensus 569 ~~~k~iI-l~vG-RL~~-~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (816)
++++++| +..| |-.+ .+.+..+++++.++.+.+|++++++...... ..+.+.+.....+..-.+..
T Consensus 181 ~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~~~~~~~~~ 249 (373)
T PF02684_consen 181 DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEYPPDVSIVI 249 (373)
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhhCCCCeEEE
Confidence 4556654 4445 3334 3466899999999999999999998875432 12334555555554333433
Q ss_pred eccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc-c----------------ccccccccCC
Q 003492 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-G----------------GPAEIIEHGA 708 (816)
Q Consensus 646 lG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~-g----------------G~~EiI~dg~ 708 (816)
.. ++-+..++ +||+.+..| |.+.+|++.+|+|.|+.-- . |++.++-+..
T Consensus 250 ~~--------~~~~~~m~-~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 250 IE--------GESYDAMA-AADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred cC--------CchHHHHH-hCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 32 34577777 489888764 9999999999999998632 2 2222221111
Q ss_pred --eEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHH
Q 003492 709 --SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (816)
Q Consensus 709 --~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~m 742 (816)
-=++-+.-+++.+++++.+++ .|++.++..
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~~ 347 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELL----ENPEKRKKQ 347 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHh----cCHHHHHHH
Confidence 011223447888888886554 788764443
No 127
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=0.00065 Score=78.12 Aligned_cols=182 Identities=14% Similarity=0.150 Sum_probs=126.2
Q ss_pred cccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003492 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (816)
Q Consensus 562 ~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~- 640 (816)
..+|+ +++..++++.++. .|-...+...+.++.+.-|+-.|++-|+|++ .+....+++++++.|+.
T Consensus 422 ~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 45788 5666666666654 4555666666666666779999999999865 24578899999999994
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCCeEEE
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIE-HGASGFH 712 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT-------~~gG~~EiI~-dg~~G~l 712 (816)
.+++|.+ +.++++....+. -||+++=+.-|-| +.|.+||+.+|+||++- ..|+. ++. -|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhh
Confidence 7999998 677777777777 5999987654433 67899999999999973 23321 222 2333333
Q ss_pred ECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHH
Q 003492 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 713 i~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
.+ +.++..++=..+ -.|...+++.+..-.+...+ -+-|+-+..++++.++|.
T Consensus 561 A~--s~~dYV~~av~~----g~dral~q~~r~~l~~~r~t---spL~d~~~far~le~~y~ 612 (620)
T COG3914 561 AD--SRADYVEKAVAF----GSDRALRQQVRAELKRSRQT---SPLFDPKAFARKLETLYW 612 (620)
T ss_pred cC--CHHHHHHHHHHh----cccHHHHHhhHHHHHhcccc---CcccCHHHHHHHHHHHHH
Confidence 43 555655555443 37887888877665555443 224889999999999864
No 128
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.00018 Score=79.72 Aligned_cols=108 Identities=27% Similarity=0.380 Sum_probs=66.9
Q ss_pred CChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccc----ccccc-CCeEEEE-C--CCCHHHHHHH
Q 003492 653 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA----EIIEH-GASGFHI-D--PYHPDQAAEL 724 (816)
Q Consensus 653 v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~----EiI~d-g~~G~li-~--p~d~~~lA~~ 724 (816)
++.+|..+ .|.+.|+||+||++|.|-.|--.+|.|-|+|+..|.. |.|++ ..-|+.+ + -..+++-.++
T Consensus 492 lDYeeFVR----GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~q 567 (692)
T KOG3742|consen 492 LDYEEFVR----GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQ 567 (692)
T ss_pred CCHHHHhc----cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHH
Confidence 34445444 6999999999999999999999999999999988754 44443 2346544 2 1234444444
Q ss_pred HHHHHHhhcCCHHHHHHHHHH-HHHHHHhhcccCCCCHHHHHHHHHH
Q 003492 725 MADFFGKCKENPSHWKKISDG-GLKRIYERIIICRYTWKIYSERLMT 770 (816)
Q Consensus 725 I~~~l~~l~~dp~~~~~ms~~-ar~~~~~~~~~~~ytw~~~a~~ll~ 770 (816)
+.+++.... ...+|+++-++ --++..+ -.+|+.+..-|..
T Consensus 568 L~~~m~~F~-~qsRRQRIiqRNrtErLSd-----LLDWk~lG~~Y~~ 608 (692)
T KOG3742|consen 568 LASFMYEFC-KQSRRQRIIQRNRTERLSD-----LLDWKYLGRYYRK 608 (692)
T ss_pred HHHHHHHHH-HHHHHHHHHHhcchhhHHH-----HHhHHHHhHHHHH
Confidence 444443221 23345554443 3344555 6777766554443
No 129
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.65 E-value=0.0035 Score=69.30 Aligned_cols=192 Identities=11% Similarity=0.067 Sum_probs=124.9
Q ss_pred CcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhh
Q 003492 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (816)
Q Consensus 519 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (816)
.+...++.++|.+.|.|..+... -.--+.++|.-.+. -++.+-+.+-.-.
T Consensus 161 ~~~~~~~~a~d~~~~~~i~~da~-----------------------------~~~dL~~ign~~pD-r~e~~ke~~~~ps 210 (373)
T COG4641 161 RNCYYLPWAVDDSLFHPIPPDAS-----------------------------YDVDLNLIGNPYPD-RVEEIKEFFVEPS 210 (373)
T ss_pred cceeccCccCCchhcccCCcccc-----------------------------ceeeeEEecCCCcc-HHHHHHHHhhccc
Confidence 45667899999999988653221 11136677775543 1222222221111
Q ss_pred -ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCCh-HHHHHHHHccccEEEECCC--
Q 003492 599 -QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARN-GELYRYIADTKGAFVQPAF-- 674 (816)
Q Consensus 599 -~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~-~el~~~la~aaDvfV~PS~-- 674 (816)
++.-+-++.+.|..-. . -+....-.+++..+| .... ..+..++.. .++++.-++
T Consensus 211 ~kl~v~rr~~~~g~~y~-------------~----~~~~~~~~~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~ 268 (373)
T COG4641 211 FKLMVDRRFYVLGPRYP-------------D----DIWGRTWEPNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRAS 268 (373)
T ss_pred hhhhccceeeecCCccc-------------h----hhhcccccchhhhhh----ccCccchhhhcccc-cceeeeecHHH
Confidence 1112245666666522 0 011112234566666 3333 566666664 677665443
Q ss_pred -CCC---CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003492 675 -YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (816)
Q Consensus 675 -~Eg---FGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~ 750 (816)
-++ +.+.+.|+|+||.|.+++...+..-.+.+|..=.+.. |..++.+++.. +...++.++++.+.|.+++
T Consensus 269 ~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~--d~kdl~~~~~y----ll~h~~erkeiae~~ye~V 342 (373)
T COG4641 269 IANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ--DSKDLKEKLKY----LLNHPDERKEIAECAYERV 342 (373)
T ss_pred HHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec--CHHHHHHHHHH----HhcCcchHHHHHHhhHHHH
Confidence 222 3778999999999999999999999998987655554 89999999955 4489999999999999999
Q ss_pred HhhcccCCCCHHHHHHHHHHHHH
Q 003492 751 YERIIICRYTWKIYSERLMTLAG 773 (816)
Q Consensus 751 ~~~~~~~~ytw~~~a~~ll~ly~ 773 (816)
.. .||-+.-+.++++...
T Consensus 343 ~~-----~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 343 LA-----RHTYEERIFKLLNEIA 360 (373)
T ss_pred HH-----hccHHHHHHHHHHHHH
Confidence 99 8999888877777543
No 130
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.63 E-value=0.0045 Score=68.84 Aligned_cols=201 Identities=19% Similarity=0.181 Sum_probs=116.0
Q ss_pred hCCCceEEEEcCCCc-hHHHHHHHHHcC--CcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEe
Q 003492 404 LQGFPDFIIGNYSDG-NLVASLLAYKMG--ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (816)
Q Consensus 404 l~~kPDIIh~h~~~~-~lva~lla~~~g--ip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (816)
+..+||++++-++++ |+-....-|+.| +|+++.+- .+-|.|+.... ....+.+|.+.+
T Consensus 82 ~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~--------PsVWAWr~~Ra-----------~~i~~~~D~lLa 142 (381)
T COG0763 82 LANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS--------PSVWAWRPKRA-----------VKIAKYVDHLLA 142 (381)
T ss_pred HhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC--------cceeeechhhH-----------HHHHHHhhHeee
Confidence 356999999766554 665555555666 77654332 13345543321 124567899888
Q ss_pred cCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEe-cCCCcCCCCCCCchHHHHHhhhhccchhhccCccc
Q 003492 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (816)
Q Consensus 481 ~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VI-pnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (816)
.=+-|.+. |. ..|+ ..+.| ++=+|.-.+.+....
T Consensus 143 ilPFE~~~-------y~-------------k~g~-----~~~yVGHpl~d~i~~~~~r~~-------------------- 177 (381)
T COG0763 143 ILPFEPAF-------YD-------------KFGL-----PCTYVGHPLADEIPLLPDREA-------------------- 177 (381)
T ss_pred ecCCCHHH-------HH-------------hcCC-----CeEEeCChhhhhccccccHHH--------------------
Confidence 87766542 11 1122 13334 333343323332222
Q ss_pred cccccCCCCCCCCcE-EEEEec-cCC-CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHH
Q 003492 560 NDEHVGTLSDRSKPI-VFSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 636 (816)
Q Consensus 560 ~~~~lg~l~~~~k~i-Il~vGR-L~~-~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~ 636 (816)
.++.+|+ +.++++ .+..|. -.+ .+....+.+++.++.++.|+.++++--.... .+.......+
T Consensus 178 ar~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~ 243 (381)
T COG0763 178 AREKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALK 243 (381)
T ss_pred HHHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhh
Confidence 1244676 444444 455553 333 4567888999999998999999998776543 2233333332
Q ss_pred cCC-CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 003492 637 YKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (816)
Q Consensus 637 ~~L-~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~ 696 (816)
... ...+... .++-+..++ +||+.+.. .|.+.+|+|.+|+|.|.+.
T Consensus 244 ~~~~~~~~~~~--------~~~~~~a~~-~aD~al~a-----SGT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 244 WEVAGLSLILI--------DGEKRKAFA-AADAALAA-----SGTATLEAALAGTPMVVAY 290 (381)
T ss_pred ccccCceEEec--------CchHHHHHH-HhhHHHHh-----ccHHHHHHHHhCCCEEEEE
Confidence 222 1223332 245566777 48987765 4999999999999999873
No 131
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.58 E-value=0.00098 Score=80.66 Aligned_cols=152 Identities=14% Similarity=0.123 Sum_probs=111.9
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHH-HH---HHHHHhhccC----CCeEEEEEeccCCCCCCcchHHHHHHHHHHHHH
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LV---ECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~----p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li 634 (816)
..|...+++...++++-|+..+|.... ++ +-+.++++.- ....+++.|...+ .|......++.+.+++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 346666888889999999999998887 44 4455555431 2366777776544 3556666777777777
Q ss_pred H----HcCCCC--cEEEeccccCcCChHHHHHHHHccccEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003492 635 K----TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (816)
Q Consensus 635 ~----~~~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d 706 (816)
+ .-.+.+ +|.|+. -. +-.+.+.+-.++|+-.+-|. .|+.|..-+=||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY-~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NY-SVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CC-CHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 7 223345 788886 23 33556666668999999887 79999999999999999999999999999986
Q ss_pred --CCeEEEECCCCHHHHHHH
Q 003492 707 --GASGFHIDPYHPDQAAEL 724 (816)
Q Consensus 707 --g~~G~li~p~d~~~lA~~ 724 (816)
++|||.|-. +.+++++.
T Consensus 685 vG~eN~~~fG~-~~~ev~~~ 703 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEAL 703 (815)
T ss_pred cCCCcEEEeCC-CHHHHHHH
Confidence 889999954 56665543
No 132
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.41 E-value=0.0023 Score=77.52 Aligned_cols=151 Identities=14% Similarity=0.088 Sum_probs=108.8
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHH----HHHHHHHhhccC----CCeEEEEEeccCCCCCCcchHHHHHHHHHHHHH
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTG----LVECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~----LieA~~~l~~~~----p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li 634 (816)
..|+..+++...++++-|+..+|.... .++-+.++++.. ....+++.|...+ .+......++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 446656888899999999999998887 455566665431 1256666665544 2444555666666666
Q ss_pred HHc----CCCC--cEEEeccccCcCChHHHHHHHHccccEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003492 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (816)
Q Consensus 635 ~~~----~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d 706 (816)
+.. .+.+ +|.|+. -.. -.+.+.+-.++|+-.+-|. .|+.|..-+=+|.-|.++++|--|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~-VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYN-VSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCC-hHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 632 2345 688885 233 3455566668999999887 79999999999999999999999999999987
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003492 707 --GASGFHIDPYHPDQAAE 723 (816)
Q Consensus 707 --g~~G~li~p~d~~~lA~ 723 (816)
++|+|+|-. +.++..+
T Consensus 672 vG~eN~fiFG~-~~~ev~~ 689 (797)
T cd04300 672 VGEENIFIFGL-TAEEVEA 689 (797)
T ss_pred hCcCcEEEeCC-CHHHHHH
Confidence 789999954 5555443
No 133
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.28 E-value=0.003 Score=63.38 Aligned_cols=110 Identities=21% Similarity=0.270 Sum_probs=62.2
Q ss_pred HHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEE----ecCCCcccCCCChhhhhhhhhhhhchhhhhHHHH
Q 003492 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTI----AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLI 470 (816)
Q Consensus 396 ~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~-gip~v~t----~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~ 470 (816)
++..+++. +..||||++|...|.. ..++... ++|++.- .|+-...-.-+... -.......+...+-+..+.
T Consensus 56 a~~~L~~~-Gf~PDvI~~H~GWGe~--Lflkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~-p~~~~~~~~~r~rN~~~l~ 131 (171)
T PF12000_consen 56 AARQLRAQ-GFVPDVIIAHPGWGET--LFLKDVFPDAPLIGYFEFYYRASGADVGFDPEF-PPSLDDRARLRMRNAHNLL 131 (171)
T ss_pred HHHHHHHc-CCCCCEEEEcCCcchh--hhHHHhCCCCcEEEEEEEEecCCCCcCCCCCCC-CCCHHHHHHHHHHhHHHHH
Confidence 34444444 7789999999988733 3445555 6776632 22211110000000 0111222222233344567
Q ss_pred HHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCC
Q 003492 471 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (816)
Q Consensus 471 a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f 533 (816)
++..||..|+.|.-.+. +| |. .+.+|+.||+-|||++.+
T Consensus 132 ~l~~~D~~isPT~wQ~~-------~f--------P~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 132 ALEQADAGISPTRWQRS-------QF--------PA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHhCCcCcCCCHHHHH-------hC--------CH---------HHHcCcEEeecccchhhc
Confidence 88899999999976544 22 22 236799999999999765
No 134
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.27 E-value=0.16 Score=56.95 Aligned_cols=277 Identities=14% Similarity=0.168 Sum_probs=161.3
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCH
Q 003492 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (816)
Q Consensus 405 ~~kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (816)
+.+||+|..|.-.. .+.++++|...++|++..--++-. .+.+|-. .+ .....-.-||.-++.|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE---E~-------NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE---EI-------NRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH---HH-------HHHHHHHhhhhhcCChH
Confidence 34999999887554 577799999999998876555421 1111111 00 01122334666677777
Q ss_pred HHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhccchhhccCccccccc
Q 003492 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (816)
Q Consensus 484 ~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (816)
..++ +....|++ ..++.|+.|-+-. .-.... ..+.+ .......
T Consensus 155 ~ar~--------------------nLl~EG~~--~~~IfvtGnt~iD--------al~~~~---~~~~~----~~~~~~~ 197 (383)
T COG0381 155 IARK--------------------NLLREGVP--EKRIFVTGNTVID--------ALLNTR---DRVLE----DSKILAK 197 (383)
T ss_pred HHHH--------------------HHHHcCCC--ccceEEeCChHHH--------HHHHHH---hhhcc----chhhHHh
Confidence 6654 22234554 5578888774311 000000 00000 0000000
Q ss_pred cCCCCCCC-CcEEEEEeccCCC-CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHH-HHcCCC
Q 003492 564 VGTLSDRS-KPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-KTYKLD 640 (816)
Q Consensus 564 lg~l~~~~-k~iIl~vGRL~~~-Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li-~~~~L~ 640 (816)
+ + .+.+ +.++++.=|-... +++..+++++.++.++++++.++.--... ..+++.. ..++-.
T Consensus 198 ~-~-~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~~ 261 (383)
T COG0381 198 G-L-DDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKNV 261 (383)
T ss_pred h-h-ccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCCC
Confidence 0 1 1333 3445555565543 89999999999999888777666544332 2333333 556666
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHH
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPD 719 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~g-G~~EiI~dg~~G~li~p~d~~ 719 (816)
++|.++. ++...++..++.. |-+.+ . -.|-..=||-..|+||++-..+ .-+|.++.| +-.++.. |.+
T Consensus 262 ~~v~li~----pl~~~~f~~L~~~-a~~il-t----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg~-~~~ 329 (383)
T COG0381 262 ERVKLID----PLGYLDFHNLMKN-AFLIL-T----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVGT-DEE 329 (383)
T ss_pred CcEEEeC----CcchHHHHHHHHh-ceEEE-e----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeCc-cHH
Confidence 7799987 7888888888875 53333 3 2355678999999999997443 456666444 4455643 667
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHh
Q 003492 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVY 775 (816)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y 775 (816)
.+.+++.. +++|++..++|+.. .. .|.=...++++.++...|
T Consensus 330 ~i~~~~~~----ll~~~~~~~~m~~~-----~n-----pYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 330 NILDAATE----LLEDEEFYERMSNA-----KN-----PYGDGNASERIVEILLNY 371 (383)
T ss_pred HHHHHHHH----HhhChHHHHHHhcc-----cC-----CCcCcchHHHHHHHHHHH
Confidence 77777754 44888888877543 33 566566666666655443
No 135
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.27 E-value=0.012 Score=70.84 Aligned_cols=143 Identities=16% Similarity=0.135 Sum_probs=110.5
Q ss_pred cCCCCCCCCcEEEEEeccCCCCCHHHHH----HHHHHhh-ccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003492 564 VGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNS-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~-~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~ 638 (816)
.|+..+++...++++-|+.++|..+..+ ..+..++ +..|.+.+++.|...+ .|....+.++.+...++..+
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~in 554 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVIN 554 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhhc
Confidence 4555578889999999999999766554 4555555 4445566666666544 35566667777888888877
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccccEEEECCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCCeEEEEC
Q 003492 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHID 714 (816)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~--dg~~G~li~ 714 (816)
...+|.|+. -. +-.+.+.+-.++||=.+-|. .|+.|..-+=||.-|.++|+|--|...|+.+ ++.|||.|-
T Consensus 555 ~~lkVvFl~----nY-dvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 555 NKLKVVFLP----NY-DVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ccceEEEeC----CC-ChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 777899996 23 33566666668999998776 7999999999999999999999999999997 899999996
Q ss_pred C
Q 003492 715 P 715 (816)
Q Consensus 715 p 715 (816)
.
T Consensus 630 ~ 630 (750)
T COG0058 630 E 630 (750)
T ss_pred C
Confidence 4
No 136
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.23 E-value=0.085 Score=62.52 Aligned_cols=245 Identities=16% Similarity=0.120 Sum_probs=129.4
Q ss_pred CCCceEEEEcCC-CchHHHHHHHHHcCC--cEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEec
Q 003492 405 QGFPDFIIGNYS-DGNLVASLLAYKMGI--TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (816)
Q Consensus 405 ~~kPDIIh~h~~-~~~lva~lla~~~gi--p~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (816)
..+||++++-++ +-|+-.+..+++.|+ |+++-+- ..-+.|+..+- ...-+..|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs--------PqVWAWR~~Ri-----------kki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC--------PSIWAWRPKRK-----------TILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC--------ccceeeCcchH-----------HHHHHHhhhheec
Confidence 459999997554 448766677777885 8765332 12233432211 1123456888777
Q ss_pred CHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecC-CCcCCCCCCCchHHHHHhhhhccchhhccCcccc
Q 003492 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (816)
Q Consensus 482 S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpn-GVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (816)
=+-|.+- |+ .+|+ +++.|-+ =+|.-...+.....
T Consensus 369 fPFE~~~-------------------y~-~~gv-----~v~yVGHPL~d~i~~~~~~~~~-------------------- 403 (608)
T PRK01021 369 LPFEQNL-------------------FK-DSPL-----RTVYLGHPLVETISSFSPNLSW-------------------- 403 (608)
T ss_pred CccCHHH-------------------HH-hcCC-----CeEEECCcHHhhcccCCCHHHH--------------------
Confidence 7666541 21 1233 3444433 33432111221111
Q ss_pred ccccCCCCCCCCcEE-EEEe-ccCC-CCCHHHHHHHHH--HhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHH
Q 003492 561 DEHVGTLSDRSKPIV-FSMA-RLDH-VKNMTGLVECYG--KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (816)
Q Consensus 561 ~~~lg~l~~~~k~iI-l~vG-RL~~-~Kgl~~LieA~~--~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (816)
++++|+ ++++++| +..| |-.+ .+.++.+++++. .+.+ +.++++...... ..+.+++..+
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~~~-----------~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS---THQLLVSSANPK-----------YDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCchh-----------hHHHHHHHHh
Confidence 133566 4455554 4555 3333 456788888887 4433 577876433211 1234444444
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC-cc----------------
Q 003492 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG---------------- 698 (816)
Q Consensus 636 ~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~-~g---------------- 698 (816)
..+. -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|+.- .+
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~ 533 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILP 533 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCC
Confidence 3331 1234432 012366777 599998875 999999999999999862 22
Q ss_pred --ccccccccCC-eEEEE---CCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 003492 699 --GPAEIIEHGA-SGFHI---DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (816)
Q Consensus 699 --G~~EiI~dg~-~G~li---~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~ 748 (816)
+++.++.+.. ---++ +.-+++.+++++ +.+ .|++.++++.+.-.+
T Consensus 534 yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL----~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 534 AYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DIL----KTSQSKEKQKDACRD 584 (608)
T ss_pred eeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHh----cCHHHHHHHHHHHHH
Confidence 1222221111 01122 234678888775 443 788877776554433
No 137
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.19 E-value=0.25 Score=56.99 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=57.4
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccc
Q 003492 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIE 705 (816)
Q Consensus 630 l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~----gG~~EiI~ 705 (816)
.+++.+.+.-..+++.+. +.....|+..+++. +|++|-.-.. .++=|++.|+|+|+-.. -|..+.+
T Consensus 296 ~~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~l- 365 (426)
T PRK10017 296 ALNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQL- 365 (426)
T ss_pred HHHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHc-
Confidence 344445544344555443 13345688889995 9999865432 57889999999999643 3333434
Q ss_pred cCCeEEEEC--CCCHHHHHHHHHHHHHhhcCCHHHHHHH
Q 003492 706 HGASGFHID--PYHPDQAAELMADFFGKCKENPSHWKKI 742 (816)
Q Consensus 706 dg~~G~li~--p~d~~~lA~~I~~~l~~l~~dp~~~~~m 742 (816)
|...+.++ .-+.+++.+.+.+ +++|.+..++-
T Consensus 366 -g~~~~~~~~~~l~~~~Li~~v~~----~~~~r~~~~~~ 399 (426)
T PRK10017 366 -GLPEMAIDIRHLLDGSLQAMVAD----TLGQLPALNAR 399 (426)
T ss_pred -CCccEEechhhCCHHHHHHHHHH----HHhCHHHHHHH
Confidence 22334343 3345667777644 44666544433
No 138
>PLN02208 glycosyltransferase family protein
Probab=97.18 E-value=0.52 Score=54.63 Aligned_cols=93 Identities=10% Similarity=0.113 Sum_probs=55.1
Q ss_pred cEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCc-HHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC
Q 003492 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG-LTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP 715 (816)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFG-ltvlEAMA~GlPVIaT----~~gG~~EiI~d-g~~G~li~p 715 (816)
++.+.+ +++..++... . +.++||.= +| ++++||+++|+|+|+- |.......+.+ -..|..++.
T Consensus 312 g~~v~~----W~PQ~~iL~H-~-~v~~FvtH-----cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 380 (442)
T PLN02208 312 GVVWGG----WVQQPLILDH-P-SIGCFVNH-----CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSR 380 (442)
T ss_pred CcEeec----cCCHHHHhcC-C-ccCeEEcc-----CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecc
Confidence 455555 6666665542 0 12345532 33 4899999999999996 33334444443 456777753
Q ss_pred -----CCHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHHHH
Q 003492 716 -----YHPDQAAELMADFFGKCKENP-SHWKKISDGGLKR 749 (816)
Q Consensus 716 -----~d~~~lA~~I~~~l~~l~~dp-~~~~~ms~~ar~~ 749 (816)
-+.++++++|.+++ .++ +..+++.+++++.
T Consensus 381 ~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 381 EKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTKL 416 (442)
T ss_pred ccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHHH
Confidence 25678888886654 555 3455555555443
No 139
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=97.04 E-value=0.0054 Score=74.27 Aligned_cols=152 Identities=16% Similarity=0.106 Sum_probs=107.5
Q ss_pred ccCCCCCCCCcEEEEEeccCCCCCHHH-H---HHHHHHhhccC----CCeEEEEEeccCCCCCCcchHHHHHHHHHHHHH
Q 003492 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-L---VECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (816)
Q Consensus 563 ~lg~l~~~~k~iIl~vGRL~~~Kgl~~-L---ieA~~~l~~~~----p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li 634 (816)
+.|...+++...++++-|+..+|.... + ++.+.++++.- ....+++.|...+ .+......++.+..++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 446666888888999999999998877 4 44555555421 1346666666544 2444445556666666
Q ss_pred HHc----CCCC--cEEEeccccCcCChHHHHHHHHccccEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003492 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (816)
Q Consensus 635 ~~~----~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d 706 (816)
+.. .+.+ +|.|+. -.. -.+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|--|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~-VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYN-VSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCC-hHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 442 2344 688886 233 3455555558999999887 79999999999999999999999999999987
Q ss_pred --CCeEEEECCCCHHHHHHH
Q 003492 707 --GASGFHIDPYHPDQAAEL 724 (816)
Q Consensus 707 --g~~G~li~p~d~~~lA~~ 724 (816)
++|+|+|-. +.++..+.
T Consensus 669 vG~eN~fiFG~-~~~ev~~~ 687 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVEAL 687 (794)
T ss_pred hCcccEEEcCC-CHHHHHHH
Confidence 789999953 55665543
No 140
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=96.99 E-value=0.0039 Score=75.31 Aligned_cols=149 Identities=14% Similarity=0.050 Sum_probs=107.1
Q ss_pred cCCCCCCCCcEEEEEeccCCCCCHHH-HH---HHHHHhhccCC-----CeEEEEEeccCCCCCCcchHHHHHHHHHHHHH
Q 003492 564 VGTLSDRSKPIVFSMARLDHVKNMTG-LV---ECYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~p-----~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li 634 (816)
.|...+++...++++-|+..+|.... ++ +-+.++++. | ...+++.|...+ .|......++.+..++
T Consensus 521 ~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 595 (798)
T PRK14985 521 TGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIREN-PQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 595 (798)
T ss_pred hCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 45655788888999999999998777 44 445555432 2 266777776544 3445555566666666
Q ss_pred HHcC----CCC--cEEEeccccCcCChHHHHHHHHccccEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003492 635 KTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (816)
Q Consensus 635 ~~~~----L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d 706 (816)
+..+ +.+ +|.|+. -.. -.+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~-VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYC-VSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCC-hHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 5442 234 688886 233 3455556558999999887 79999999999999999999999999999986
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003492 707 --GASGFHIDPYHPDQAAE 723 (816)
Q Consensus 707 --g~~G~li~p~d~~~lA~ 723 (816)
++|||.|-. +.+++.+
T Consensus 671 vG~eN~f~fG~-~~~ev~~ 688 (798)
T PRK14985 671 VGEENIFIFGH-TVEQVKA 688 (798)
T ss_pred hCcCcEEEeCC-CHHHHHH
Confidence 789999964 5555443
No 141
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.89 E-value=1.2 Score=52.29 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=51.5
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccc-cccccCCeEEEECC
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPA-EIIEHGASGFHIDP 715 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~----~gG~~-EiI~dg~~G~li~p 715 (816)
+++.+.+ +++..++... . +.++||.= -| -.+++||+.+|+|+|+-. ..... .+++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555566 6776666531 1 34556543 12 348999999999999963 33344 34544456766631
Q ss_pred -------------CCHHHHHHHHHHHHHhhcCCHHHHHH
Q 003492 716 -------------YHPDQAAELMADFFGKCKENPSHWKK 741 (816)
Q Consensus 716 -------------~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (816)
-+.++++++|.+++. .|++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 256777778866541 25554443
No 142
>PLN03007 UDP-glucosyltransferase family protein
Probab=96.80 E-value=1.7 Score=51.06 Aligned_cols=78 Identities=10% Similarity=0.112 Sum_probs=45.5
Q ss_pred CCcEEEeccccCcCChHHHHHHHHcccc--EEEECCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CCeEEE
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH-GASGFH 712 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaD--vfV~PS~~EgFGltvlEAMA~GlPVIaT~~----gG~~EiI~d-g~~G~l 712 (816)
..++...+ +++..++.. .++ +||.-. | -.+++||+++|+|+|+-.. .-....+.+ -..|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH~---G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTHC---G-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeecC---c-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 34677766 677766554 343 466431 2 3489999999999999633 333333221 123433
Q ss_pred EC----------CCCHHHHHHHHHHHH
Q 003492 713 ID----------PYHPDQAAELMADFF 729 (816)
Q Consensus 713 i~----------p~d~~~lA~~I~~~l 729 (816)
+. .-+.++++++|.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 126677888886554
No 143
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.61 E-value=2.2 Score=49.97 Aligned_cols=119 Identities=16% Similarity=0.120 Sum_probs=66.3
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc----Cccccccccc-cCCeEEEECC
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHIDP 715 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~-dg~~G~li~p 715 (816)
.++++.+ +++..++... .+.++||.- +--.+++||+++|+|+|+- |..-....+. .-+.|..+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTH----CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEec----CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4567666 6676665542 125677754 2234899999999999995 4444444443 3367776632
Q ss_pred -----CCHHHHHHHHHHHHHhhcCCHHHHH---HHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHhhh
Q 003492 716 -----YHPDQAAELMADFFGKCKENPSHWK---KISDGGLKRIYERIIICRYTWKIYSERLMTLAGVYGF 777 (816)
Q Consensus 716 -----~d~~~lA~~I~~~l~~l~~dp~~~~---~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y~~ 777 (816)
-+.+++++++.+.+. ++++.++ ++++.+++.+.+ .=+-.+..+++.+-...+|.
T Consensus 413 ~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~-----gGSS~~~l~~~v~~i~~~~~ 474 (477)
T PLN02863 413 GADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKE-----RGSSVKDLDGFVKHVVELGL 474 (477)
T ss_pred CCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhcc-----CCcHHHHHHHHHHHHHHhcc
Confidence 256778888866542 3444333 223333333333 22334445566665555553
No 144
>PLN02562 UDP-glycosyltransferase
Probab=96.61 E-value=2.1 Score=49.73 Aligned_cols=88 Identities=14% Similarity=0.120 Sum_probs=57.6
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEEC
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID 714 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~d-g~~G~li~ 714 (816)
.+++...+ +++..++... . +.++||.- +--.+++||+.+|+|+|+- |.......+.+ -..|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35677776 7777776652 1 13355543 2234899999999999986 44445555544 35677776
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHH
Q 003492 715 PYHPDQAAELMADFFGKCKENPSHWKK 741 (816)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (816)
.-+.++++++|.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 567888888886665 67765544
No 145
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.53 E-value=0.56 Score=51.29 Aligned_cols=169 Identities=10% Similarity=0.060 Sum_probs=112.9
Q ss_pred CcEEEEEecc-CCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003492 572 KPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (816)
Q Consensus 572 k~iIl~vGRL-~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (816)
.++.+.+|+= ++..+...+++++.+... .++++++.=+.+. ...+|++++.+..+++--.++++.+-
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~--- 212 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT--- 212 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---
Confidence 3566667764 577777788888876643 5788888766543 12478888988888886557888776
Q ss_pred CcCChHHHHHHHHccccEEEECC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCCHHHHHHHHHHH
Q 003492 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (816)
Q Consensus 651 ~~v~~~el~~~la~aaDvfV~PS-~~EgFGltvlEAMA~GlPVIaT-~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~ 728 (816)
+.++-+|...+++. +|+.++-- +.+|.|.. .=.+..|+||+.+ ++.-..++.+.|.. ++++.++. -..+.+
T Consensus 213 e~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGnl-~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L---~~~~v~- 285 (322)
T PRK02797 213 EKLPFDDYLALLRQ-CDLGYFIFARQQGIGTL-CLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDL---DEDIVR- 285 (322)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhHHhHH-HHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCcc---cHHHHH-
Confidence 57888999999996 99988875 57899955 4478999999998 55666676666544 33443322 111111
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 729 FGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 729 l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
+..+++...-++.+ .|+-+.+.+.|.+++..
T Consensus 286 --------e~~rql~~~dk~~I-------~Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 286 --------EAQRQLASVDKNII-------AFFSPNYLQGWRNALAI 316 (322)
T ss_pred --------HHHHHHHhhCccee-------eecCHhHHHHHHHHHHH
Confidence 01122333333333 38888999988887653
No 146
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.47 E-value=2.6 Score=49.05 Aligned_cols=80 Identities=11% Similarity=0.123 Sum_probs=51.1
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 714 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~dg-~~G~li~ 714 (816)
.+++.+.+ +++..++...= +.++||.- +-.++++||+++|+|+|+- |..-....+.+. +.|.-+.
T Consensus 316 ~~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred CCceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 35677777 77776665521 12356543 2246899999999999996 344455556553 4676654
Q ss_pred CC------CHHHHHHHHHHHH
Q 003492 715 PY------HPDQAAELMADFF 729 (816)
Q Consensus 715 p~------d~~~lA~~I~~~l 729 (816)
.. +.+++++++.+++
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred ecccCCcccHHHHHHHHHHHh
Confidence 21 5688888886655
No 147
>PLN00414 glycosyltransferase family protein
Probab=96.36 E-value=3 Score=48.51 Aligned_cols=88 Identities=6% Similarity=-0.002 Sum_probs=54.7
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccc-cCCeEEEECC-----CCHHHH
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIE-HGASGFHIDP-----YHPDQA 721 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~----~gG~~EiI~-dg~~G~li~p-----~d~~~l 721 (816)
+++..++...= +.++||.- +--.+++||+++|+|+|+-. ..-....+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h~--~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSHP--SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcCC--ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 66777766521 13567754 22358999999999999963 333445553 4467777742 367788
Q ss_pred HHHHHHHHHhhcCCH-HHHHHHHHHHHHH
Q 003492 722 AELMADFFGKCKENP-SHWKKISDGGLKR 749 (816)
Q Consensus 722 A~~I~~~l~~l~~dp-~~~~~ms~~ar~~ 749 (816)
++++.+++ .++ +..+++.+++++.
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 88886655 554 4455555555544
No 148
>PLN02670 transferase, transferring glycosyl groups
Probab=96.35 E-value=3.1 Score=48.69 Aligned_cols=110 Identities=14% Similarity=0.128 Sum_probs=64.4
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCCeEEEECC---
Q 003492 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP--- 715 (816)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~dg~~G~li~p--- 715 (816)
+.+.+ +++..++...= +.++||.- +--++++||+++|+|+|+- |.......+..-+.|..++.
T Consensus 341 ~vv~~----W~PQ~~IL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~ 410 (472)
T PLN02670 341 MIHVG----WVPQVKILSHE--SVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDER 410 (472)
T ss_pred eEEeC----cCCHHHHhcCc--ccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeecccc
Confidence 45555 66766665421 13335543 2234899999999999996 34445555555678887753
Q ss_pred ---CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH---HHhhcccCCCCHHHHHHHHHHHH
Q 003492 716 ---YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR---IYERIIICRYTWKIYSERLMTLA 772 (816)
Q Consensus 716 ---~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~---~~~~~~~~~ytw~~~a~~ll~ly 772 (816)
-+.++++++|.+++ .+++ -.++.+++++. +.+ .=+-..+++.+++..
T Consensus 411 ~~~~~~e~i~~av~~vm----~~~~-g~~~r~~a~~l~~~~~~-----~~~~~~~~~~~~~~l 463 (472)
T PLN02670 411 DGSFTSDSVAESVRLAM----VDDA-GEEIRDKAKEMRNLFGD-----MDRNNRYVDELVHYL 463 (472)
T ss_pred CCcCcHHHHHHHHHHHh----cCcc-hHHHHHHHHHHHHHHhC-----cchhHHHHHHHHHHH
Confidence 24778888886655 5542 22333333333 333 455666666666643
No 149
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=96.18 E-value=0.91 Score=48.62 Aligned_cols=139 Identities=14% Similarity=0.047 Sum_probs=78.5
Q ss_pred EEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHH----------HHHHcCC--CCcE
Q 003492 576 FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE----------LMKTYKL--DGQF 643 (816)
Q Consensus 576 l~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~----------li~~~~L--~~~V 643 (816)
.|+||.+..||+..+++.-++..+. +...-++-|-...+ +...-+.. .+.+..+ ...+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~ 256 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKISIKDHGIPYEYYPKLDCDEPKPAPNSPV 256 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHHHHHTT--EEEE-CTGGGG---SSS--E
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceeeeecCCcccccCccccccCcccCCCCcc
Confidence 7999999999999999998887654 66777777754330 11111100 0011111 2336
Q ss_pred EEeccccCcCChHHHHHHHHccccEEEECCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc-------ccccCCe
Q 003492 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE-------IIEHGAS 709 (816)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~------~EgFGltvlEAMA~Gl-PVIaT~~gG~~E-------iI~dg~~ 709 (816)
..+| +.-++|....++. +...++-+. .+..-.|-+|..|||+ ||+-+..|.... .+.+..+
T Consensus 257 ~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 257 PVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred eecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 6666 6778899999985 555555432 3557789999999995 777776665433 3444456
Q ss_pred EEEECCCCHHHHHHHHHHHH
Q 003492 710 GFHIDPYHPDQAAELMADFF 729 (816)
Q Consensus 710 G~li~p~d~~~lA~~I~~~l 729 (816)
.+.++..|.++..++|.++.
T Consensus 332 ~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHH
T ss_pred eeEeccchHHHHHHHHHHHh
Confidence 78899999999999996653
No 150
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.15 E-value=0.021 Score=50.55 Aligned_cols=72 Identities=17% Similarity=0.080 Sum_probs=50.6
Q ss_pred CceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003492 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (816)
Q Consensus 360 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~--~lva~lla~~~gip~v~t~ 437 (816)
.+.+++.+|+... .+....|.+-....-+...+. +++.||||+|...+ ..-+.+-|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ili---rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILI---RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHH---HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 4789999998753 233445544433333333333 34899999999876 4568889999999999999
Q ss_pred cCCCc
Q 003492 438 HALEK 442 (816)
Q Consensus 438 H~l~~ 442 (816)
|++..
T Consensus 83 HSLfg 87 (90)
T PF08288_consen 83 HSLFG 87 (90)
T ss_pred ccccc
Confidence 98753
No 151
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.06 E-value=4.2 Score=47.38 Aligned_cols=93 Identities=12% Similarity=0.155 Sum_probs=57.3
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC-
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID- 714 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~dg-~~G~li~- 714 (816)
++....+ +++..++...= +.++||.-. | -.+++||+++|+|+|+- |.......+.+. +.|+.+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h~--~v~~fvtH~---G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSHP--AVGGFWSHC---G-WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCCC--ccCeeeecC---c-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5566666 77777766531 244577542 2 24899999999999996 444455555443 5777663
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 003492 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (816)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~ 748 (816)
.-+.++++++|.+++ .|++ .+++.+++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~~ 422 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAIS 422 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHHH
Confidence 336778888886655 5654 3444444433
No 152
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.01 E-value=0.91 Score=50.33 Aligned_cols=122 Identities=11% Similarity=0.064 Sum_probs=87.1
Q ss_pred CCcEEEEEecc-CCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003492 571 SKPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (816)
Q Consensus 571 ~k~iIl~vGRL-~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (816)
++++-+.+|+= ++..+...+++++.+.. ..++++++-=+.+. ...+|++++.+.++++--.+++..+-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~-- 251 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT-- 251 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh--
Confidence 34555567764 56777777777777543 35688777644433 12467888888888876556787764
Q ss_pred cCcCChHHHHHHHHccccEEEECCC-CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003492 650 TNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (816)
Q Consensus 650 ~~~v~~~el~~~la~aaDvfV~PS~-~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d 706 (816)
+.++-+|...++++ +|+.++... ..|.|. +.=.+.+|+||+.+.....-.....
T Consensus 252 -e~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 252 -EFMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred -hhCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHh
Confidence 47889999999996 999999875 788885 5558999999999966555444433
No 153
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=95.72 E-value=0.9 Score=55.53 Aligned_cols=151 Identities=13% Similarity=0.134 Sum_probs=108.2
Q ss_pred CCCcEEEEEeccCCCCCHHHHHHHHHHhhccCC----CeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHc----CC--
Q 003492 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY----KL-- 639 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p----~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~----~L-- 639 (816)
.++.+|+.+-|++..||+..=+.++.++...+| .+.++.+..+... ...+-.+.+..+...+.+. +-
T Consensus 274 ~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~---~~~~v~~~k~~v~~~v~rIn~~f~~~~ 350 (732)
T KOG1050|consen 274 KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT---DGKEVEELKFCVSVHVRRINEKFGSAS 350 (732)
T ss_pred cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc---cchHHHHHHHHhHhhhhhhhhccCCcc
Confidence 467789999999999999888888888776655 4667777665441 1111112222333333222 11
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcC----CcEEEcCccccccccccCCeEEEECC
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHGGPAEIIEHGASGFHIDP 715 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~G----lPVIaT~~gG~~EiI~dg~~G~li~p 715 (816)
...|+++- ..++..++..+++ .+|++...++.+|..++.+|+.+|. .+.|.+..-|..+..+++ ..+++|
T Consensus 351 ~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~--aivvnp 424 (732)
T KOG1050|consen 351 YQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA--AIVVNP 424 (732)
T ss_pred cceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceEEeeecccccccccc--CEEECC
Confidence 12344332 3677888998888 5999999999999999999999983 788888888888887554 578999
Q ss_pred CCHHHHHHHHHHHH
Q 003492 716 YHPDQAAELMADFF 729 (816)
Q Consensus 716 ~d~~~lA~~I~~~l 729 (816)
.|.++++..|..++
T Consensus 425 w~~~~~~~~i~~al 438 (732)
T KOG1050|consen 425 WDGDEFAILISKAL 438 (732)
T ss_pred cchHHHHHHHHHHh
Confidence 99999999998776
No 154
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.72 E-value=0.3 Score=54.77 Aligned_cols=79 Identities=16% Similarity=0.088 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHc
Q 003492 585 KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664 (816)
Q Consensus 585 Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~ 664 (816)
+.+..+++++.++.+.. ..+++.|... .+.+++...+. ..+.+.+ +.+.+++
T Consensus 183 ~llP~~~~aa~~L~~~~--~~~~i~~a~~-------------~~~i~~~~~~~---~~~~~~~---------~~~~~m~- 234 (347)
T PRK14089 183 RLMPIFKELAKKLEGKE--KILVVPSFFK-------------GKDLKEIYGDI---SEFEISY---------DTHKALL- 234 (347)
T ss_pred HHHHHHHHHHHHHhhcC--cEEEEeCCCc-------------HHHHHHHHhcC---CCcEEec---------cHHHHHH-
Confidence 56677779998887643 6677766542 12333333322 2344543 2356777
Q ss_pred cccEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 003492 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (816)
Q Consensus 665 aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~ 696 (816)
+||+.+..| |.+.+|++.+|+|.|..-
T Consensus 235 ~aDlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 235 EAEFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred hhhHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 599888764 888889999999999863
No 155
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=95.69 E-value=0.16 Score=61.27 Aligned_cols=149 Identities=13% Similarity=0.107 Sum_probs=95.0
Q ss_pred cCCCCCCCCcEEEEEeccCCCCCHHHH----HHHHHHhhcc----CCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHH
Q 003492 564 VGTLSDRSKPIVFSMARLDHVKNMTGL----VECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~~Kgl~~L----ieA~~~l~~~----~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (816)
.|+..+++...++++-|+..+|..... ++-+.++++. ...+.+++.|...+ .|....+.++.+.++++
T Consensus 436 ~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va~ 511 (713)
T PF00343_consen 436 TGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVAE 511 (713)
T ss_dssp HSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHHH
T ss_pred hCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHHH
Confidence 455447777888999999999988773 4555566543 12367777776654 35555566666666665
Q ss_pred H----cCCCC--cEEEeccccCcCChHHHHHHHHccccEEEECCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003492 636 T----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH- 706 (816)
Q Consensus 636 ~----~~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~d- 706 (816)
. -.+.+ +|.|+. -. +-.+.+.+-.++||-.+.|+ .|+.|..-+=||.-|.+.++|-.|...|+.+.
T Consensus 512 ~in~Dp~v~~~lkVvFle----nY-dvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v 586 (713)
T PF00343_consen 512 VINNDPEVGDRLKVVFLE----NY-DVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV 586 (713)
T ss_dssp HHCT-TTTCCGEEEEEET----T--SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH
T ss_pred HHhcChhhccceeEEeec----CC-cHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc
Confidence 3 23444 688886 33 34566677768999999876 79999999999999999999999999999864
Q ss_pred -CCeEEEECCCCHHHHH
Q 003492 707 -GASGFHIDPYHPDQAA 722 (816)
Q Consensus 707 -g~~G~li~p~d~~~lA 722 (816)
..|+|+|-. +.+++.
T Consensus 587 G~eN~fiFG~-~~~ev~ 602 (713)
T PF00343_consen 587 GEENIFIFGL-TAEEVE 602 (713)
T ss_dssp -GGGSEEES--BHHHHH
T ss_pred CCCcEEEcCC-CHHHHH
Confidence 457888853 555544
No 156
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.43 E-value=2.8 Score=46.59 Aligned_cols=134 Identities=15% Similarity=0.186 Sum_probs=75.9
Q ss_pred CCCcEEEEEeccCCCCCHHHH---HHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003492 570 RSKPIVFSMARLDHVKNMTGL---VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~L---ieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 646 (816)
.+..+++++|.= .-|-+.+ ++|+..+....+ .-++|.|...+ .....++.....-.++|...
T Consensus 218 E~~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~ 282 (400)
T COG4671 218 EGFDILVSVGGG--ADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIF 282 (400)
T ss_pred ccceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEE
Confidence 445677888753 3354433 333333333322 24666676655 34444444444445778887
Q ss_pred ccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccccc--ccc------cCCeEEEEC-CCC
Q 003492 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIE------HGASGFHID-PYH 717 (816)
Q Consensus 647 G~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~E--iI~------dg~~G~li~-p~d 717 (816)
-+. .++..+++ .|+..|.=+-| +|+.|-++.|||.+.-..+-+.| .|. =|-..++.+ .-+
T Consensus 283 ~f~------~~~~~ll~-gA~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt 351 (400)
T COG4671 283 EFR------NDFESLLA-GARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLT 351 (400)
T ss_pred Ehh------hhHHHHHH-hhheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCC
Confidence 643 35778888 48888865422 58999999999998865444433 221 122233222 224
Q ss_pred HHHHHHHHHHHH
Q 003492 718 PDQAAELMADFF 729 (816)
Q Consensus 718 ~~~lA~~I~~~l 729 (816)
++.+|++|...+
T Consensus 352 ~~~La~al~~~l 363 (400)
T COG4671 352 PQNLADALKAAL 363 (400)
T ss_pred hHHHHHHHHhcc
Confidence 667777775444
No 157
>PLN02210 UDP-glucosyl transferase
Probab=95.13 E-value=8.8 Score=44.78 Aligned_cols=70 Identities=11% Similarity=0.204 Sum_probs=45.7
Q ss_pred cCChHHHHHHHHccc--cEEEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC------CCH
Q 003492 652 RARNGELYRYIADTK--GAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP------YHP 718 (816)
Q Consensus 652 ~v~~~el~~~la~aa--DvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~d-g~~G~li~p------~d~ 718 (816)
+++..++.. .+ ++||.-. |+ .+++||+++|+|+|+- |..-....+.+ -+.|..++. -+.
T Consensus 331 w~PQ~~iL~----h~~vg~FitH~---G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 WSPQEKILS----HMAISCFVTHC---GW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred cCCHHHHhc----CcCcCeEEeeC---Cc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 677766554 24 3666431 22 3799999999999995 33444555554 467877742 366
Q ss_pred HHHHHHHHHHH
Q 003492 719 DQAAELMADFF 729 (816)
Q Consensus 719 ~~lA~~I~~~l 729 (816)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 78888886655
No 158
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.03 E-value=3.5 Score=45.13 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=38.6
Q ss_pred ccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003492 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (816)
Q Consensus 666 aDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~g---G~~EiI~dg~~G~li~p~d~~~lA~~I~~~l 729 (816)
|++++ .+-|.-.-||...|+|.|.+.-| +.-+... +.|.++...|+.+..+...+.+
T Consensus 253 a~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 253 ATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 55665 34466679999999999998744 2222222 3688888888887666665443
No 159
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.78 E-value=1.3 Score=47.73 Aligned_cols=138 Identities=17% Similarity=0.245 Sum_probs=80.0
Q ss_pred CcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEE-eccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003492 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIV-G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (816)
+.+++++|.-++ ||++. +.++.+.+. ++++.|| |++.+ ....+.+.++++ +++.+.-
T Consensus 159 r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~p-----------~l~~l~k~~~~~---~~i~~~~--- 216 (318)
T COG3980 159 RDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSNP-----------TLKNLRKRAEKY---PNINLYI--- 216 (318)
T ss_pred heEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCCc-----------chhHHHHHHhhC---CCeeeEe---
Confidence 447788887665 66554 444444443 3666555 44433 134555555544 6788764
Q ss_pred CcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEE----cCcccccccccc----CCeEEEECCCCHHHHH
Q 003492 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPAEIIEH----GASGFHIDPYHPDQAA 722 (816)
Q Consensus 651 ~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIa----T~~gG~~EiI~d----g~~G~li~p~d~~~lA 722 (816)
+..++.+++.+ ||+.+.. -|.|+.||...|+|.++ .+.-..+.-... ...|++.+ ..+..
T Consensus 217 ---~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHH
Confidence 34568888886 8887754 48999999999999333 222221211111 12455532 34444
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHH
Q 003492 723 ELMADFFGKCKENPSHWKKISDGGL 747 (816)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~ms~~ar 747 (816)
..+ ..+..|+..+..++..++
T Consensus 285 ~~~----~~i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEI----LQIQKDYARRKNLSFGSK 305 (318)
T ss_pred HHH----HHhhhCHHHhhhhhhccc
Confidence 444 334489888887766544
No 160
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=94.43 E-value=4.5 Score=43.26 Aligned_cols=112 Identities=10% Similarity=0.043 Sum_probs=67.9
Q ss_pred CCCCcEEEEEeccCCCCCH-----HHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHH-cCCCCc
Q 003492 569 DRSKPIVFSMARLDHVKNM-----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQ 642 (816)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl-----~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~-~~L~~~ 642 (816)
.++..+-++||.-.+.-.+ ..+..++.+..+. ....+++--+-.. .+..+.+++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 3556778888876654443 3334444443332 3467777776554 2455555655 444555
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003492 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (816)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~ 700 (816)
+.|-+.-++.- -...+++ +||.+|...-.-. -.-||.+.|+||++-...+.
T Consensus 226 i~w~~~d~g~N---PY~~~La-~Adyii~TaDSin---M~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTGYN---PYIDMLA-AADYIISTADSIN---MCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCCCC---chHHHHh-hcceEEEecchhh---hhHHHhccCCCeEEEecCCc
Confidence 77776422222 2456777 5999998864322 36899999999998654443
No 161
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=94.40 E-value=4 Score=45.15 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=66.1
Q ss_pred CCCcEEEEEeccCCCCC--H---HHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003492 570 RSKPIVFSMARLDHVKN--M---TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kg--l---~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~ 644 (816)
+.+.+.+.+|.=++.-. - ..+++.+..+.+..+ ..++|..+-..+ .+..+.+.+..+ -.+.+.
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~~~---~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALRELLK---DNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHhhc---CCCceE
Confidence 34556678886443222 2 256666666665554 789998887552 122333433332 345663
Q ss_pred EeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003492 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (816)
Q Consensus 645 flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG 699 (816)
+.. ..+ ..=+..+++ .||.+|.+.-. -.-+.||.++|+||..-...+
T Consensus 213 ~~~-~~~---~nPy~~~La-~ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWD-GTG---ENPYLGFLA-AADAIVVTEDS---VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred Eec-CCC---CCcHHHHHH-hCCEEEEcCcc---HHHHHHHHHcCCCEEEecCCC
Confidence 333 122 223667888 49999988432 234889999999999987766
No 162
>PLN02555 limonoid glucosyltransferase
Probab=94.08 E-value=16 Score=43.02 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=57.0
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-CeEEEEC
Q 003492 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-ASGFHID 714 (816)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~----~gG~~EiI~dg-~~G~li~ 714 (816)
.+++.+.+ +++..++... . +.++||.- +--.+++||+.+|+|+|+-. .......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45666666 6777776642 1 35667754 22348999999999999963 33344445444 6677662
Q ss_pred -----C--CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Q 003492 715 -----P--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (816)
Q Consensus 715 -----p--~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~ 749 (816)
. -+.++++++|.+++ .+++ .++|.++|++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHHH
Confidence 1 24677888886655 4432 34444444433
No 163
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=93.98 E-value=0.0025 Score=63.22 Aligned_cols=91 Identities=16% Similarity=0.259 Sum_probs=55.6
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeEEE
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFH 712 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG--------~~EiI~dg~~G~l 712 (816)
.+|.+.++.. ++..+++ .||++|.- +-+.|+.|++++|+|.|.-...+ ....+.....|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~-~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMA-AADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHH-HHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHH-HcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789988433 3677777 49999875 23579999999999998865554 2223333334444
Q ss_pred ECCC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003492 713 IDPY--HPDQAAELMADFFGKCKENPSHWKKISDGG 746 (816)
Q Consensus 713 i~p~--d~~~lA~~I~~~l~~l~~dp~~~~~ms~~a 746 (816)
+... +++.+.++| ..+..++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 4322 356677777 45558888777776554
No 164
>PLN00164 glucosyltransferase; Provisional
Probab=93.57 E-value=19 Score=42.30 Aligned_cols=88 Identities=13% Similarity=0.074 Sum_probs=50.3
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCCeEEEECC-------CCHH
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP-------YHPD 719 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI-~dg~~G~li~p-------~d~~ 719 (816)
+++..++...= +.++||.= -| -.+++||+++|+|+|+- |..-....+ +.-+.|+.++. -+.+
T Consensus 346 w~PQ~~iL~h~--~vg~fvtH---~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e 419 (480)
T PLN00164 346 WAPQKEILAHA--AVGGFVTH---CG-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAA 419 (480)
T ss_pred cCCHHHHhcCc--ccCeEEee---cc-cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHH
Confidence 66666655421 12345543 12 24899999999999995 444444444 33457776642 2467
Q ss_pred HHHHHHHHHHHhhcCCHH-HHHHHHHHHHHH
Q 003492 720 QAAELMADFFGKCKENPS-HWKKISDGGLKR 749 (816)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~-~~~~ms~~ar~~ 749 (816)
+++++|.+++ .+++ ..+++.+++.+.
T Consensus 420 ~l~~av~~vm----~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 420 ELERAVRSLM----GGGEEEGRKAREKAAEM 446 (480)
T ss_pred HHHHHHHHHh----cCCchhHHHHHHHHHHH
Confidence 7888886554 5543 244444444333
No 165
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=93.27 E-value=21 Score=41.76 Aligned_cols=140 Identities=16% Similarity=0.212 Sum_probs=71.4
Q ss_pred CCcEEEEEeccC--CCCCHHHHHHHHHHhhccCCCeEEEE-EeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003492 571 SKPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (816)
Q Consensus 571 ~k~iIl~vGRL~--~~Kgl~~LieA~~~l~~~~p~v~LvI-VG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (816)
+..+.++.|.+. +.+.+..+..++..... +|++ +.+......+.+.+............++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 355677888765 34556666667666543 3444 4431110000000000000001122222 235555556
Q ss_pred cccCcCChHHHHHHHHcccc--EEEECCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC-----C
Q 003492 648 AQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID-----P 715 (816)
Q Consensus 648 ~~~~~v~~~el~~~la~aaD--vfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~dg-~~G~li~-----p 715 (816)
+++..++.. ... +||.- +-..+++||+.+|+|+|+- |.......+.+. +.|+-+. .
T Consensus 334 ----W~PQ~~iL~----h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 401 (455)
T PLN02152 334 ----WCSQIEVLR----HRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGL 401 (455)
T ss_pred ----eCCHHHHhC----CcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCc
Confidence 677666554 344 45543 2234899999999999996 334444445441 2455442 1
Q ss_pred CCHHHHHHHHHHHH
Q 003492 716 YHPDQAAELMADFF 729 (816)
Q Consensus 716 ~d~~~lA~~I~~~l 729 (816)
-+.+++++++.+++
T Consensus 402 ~~~e~l~~av~~vm 415 (455)
T PLN02152 402 VERGEIRRCLEAVM 415 (455)
T ss_pred CcHHHHHHHHHHHH
Confidence 25678888886665
No 166
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=92.24 E-value=0.86 Score=51.19 Aligned_cols=131 Identities=11% Similarity=0.150 Sum_probs=64.0
Q ss_pred cCCCCCCCCcEEEEEeccCCCCCH------HHH--HHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHH
Q 003492 564 VGTLSDRSKPIVFSMARLDHVKNM------TGL--VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (816)
Q Consensus 564 lg~l~~~~k~iIl~vGRL~~~Kgl------~~L--ieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~ 635 (816)
+|. +.++.+|+|+-........ ... .+.+.. ...+++.+++-..-.. .....
T Consensus 186 ~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~~----------------~~~~~ 245 (369)
T PF04464_consen 186 LGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPNM----------------KKKFK 245 (369)
T ss_dssp TT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHHH----------------HTT--
T ss_pred hcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCchh----------------hhchh
Confidence 555 5677799999655432221 111 122222 2235777776654321 11111
Q ss_pred H-cCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc--Cc-------cccccccc
Q 003492 636 T-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEIIE 705 (816)
Q Consensus 636 ~-~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT--~~-------gG~~EiI~ 705 (816)
. ....++|.++. +..+++.++.. +|++|.= ++-++.|++.+++|||-- |. |...+ ..
T Consensus 246 ~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~ 312 (369)
T PF04464_consen 246 DFKEDNSNIIFVS------DNEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YE 312 (369)
T ss_dssp --TT-TTTEEE-T------T-S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TT
T ss_pred hhhccCCcEEECC------CCCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hH
Confidence 1 34457788765 22368888884 9999964 566899999999999954 32 22222 22
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHH
Q 003492 706 HGASGFHIDPYHPDQAAELMADFF 729 (816)
Q Consensus 706 dg~~G~li~p~d~~~lA~~I~~~l 729 (816)
+...|-.+. +.+++.++|.+++
T Consensus 313 ~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 313 EDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TSSSS-EES--SHHHHHHHHTTHH
T ss_pred hhCCCceeC--CHHHHHHHHHhhh
Confidence 333455564 8899999986654
No 167
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=92.08 E-value=0.43 Score=55.81 Aligned_cols=168 Identities=10% Similarity=-0.025 Sum_probs=75.3
Q ss_pred CCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003492 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (816)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (816)
+..++++.|.+.. .-....++++.+..+..|+ ++++.-.+.. . -.+++++....
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~------------~---------~~l~~n~~~~~--- 329 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEP------------P---------ENLPKNVLIVK--- 329 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSH------------G---------CHHHTTEEEES---
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-cccccccccc------------c---------ccccceEEEec---
Confidence 3456788898753 2233323333332223344 6666655432 0 11235677766
Q ss_pred CcCChHHHHHHHHc-cccEEEECCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCCeEEEECCC--CHHHHHH
Q 003492 651 NRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHIDPY--HPDQAAE 723 (816)
Q Consensus 651 ~~v~~~el~~~la~-aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~----~gG~~EiI~dg~~G~li~p~--d~~~lA~ 723 (816)
++|..++.. + ..++||.= |--.++.||+.+|+|+|+-. ....+..+++...|..++.. +.+++.+
T Consensus 330 -W~PQ~~lL~---hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 401 (500)
T PF00201_consen 330 -WLPQNDLLA---HPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRA 401 (500)
T ss_dssp -S--HHHHHT---STTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHH
T ss_pred -cccchhhhh---cccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHH
Confidence 777766653 2 13456643 23458999999999999963 33455556666678888754 4466777
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHhhhhHHh
Q 003492 724 LMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVYGFWKYV 781 (816)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y~~~~~~ 781 (816)
+|.++ ++|+.+++...+-+...-.+ ..+-...+-.|.+..-.++--.++
T Consensus 402 ai~~v----l~~~~y~~~a~~ls~~~~~~-----p~~p~~~~~~~ie~v~~~~~~~~l 450 (500)
T PF00201_consen 402 AIREV----LENPSYKENAKRLSSLFRDR-----PISPLERAVWWIEYVARHGGAPHL 450 (500)
T ss_dssp HHHHH----HHSHHHHHHHHHHHHTTT-------------------------------
T ss_pred HHHHH----HhhhHHHHHHHHHHHHHhcC-----CCCHHHHHHHHHHHHHhcCCCccc
Confidence 77554 48987665544433222222 345555555566654444443333
No 168
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=91.17 E-value=37 Score=39.97 Aligned_cols=78 Identities=17% Similarity=0.172 Sum_probs=49.1
Q ss_pred cEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC----cccccccc-ccCCeEEEECC-
Q 003492 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHIDP- 715 (816)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~----~gG~~EiI-~dg~~G~li~p- 715 (816)
.+.+.+ +++..++...-+ .+.||.- +--.+++||+.+|+|+|+-. .......+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 466666 677666665211 2335543 22358999999999999963 33344455 34456777743
Q ss_pred ---CCHHHHHHHHHHHH
Q 003492 716 ---YHPDQAAELMADFF 729 (816)
Q Consensus 716 ---~d~~~lA~~I~~~l 729 (816)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36678888886665
No 169
>PLN02764 glycosyltransferase family protein
Probab=90.40 E-value=42 Score=39.24 Aligned_cols=92 Identities=7% Similarity=0.043 Sum_probs=55.6
Q ss_pred EEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccc-cCCeEEEECC--
Q 003492 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIE-HGASGFHIDP-- 715 (816)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~----gG~~EiI~-dg~~G~li~p-- 715 (816)
+...+ +++..++...= +.++||.- +--.+++||+++|+|+|+-.. ...+..+. .-..|+.+..
T Consensus 319 ~v~~~----W~PQ~~vL~h~--~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 319 VVWGG----WVQQPLILSHP--SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred cEEeC----CCCHHHHhcCc--ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 44545 67777766531 24567754 224589999999999999643 33445553 3356766532
Q ss_pred ---CCHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHHH
Q 003492 716 ---YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 748 (816)
Q Consensus 716 ---~d~~~lA~~I~~~l~~l~~dp-~~~~~ms~~ar~ 748 (816)
-+.+++.+++.+++ .++ +..+++.+++++
T Consensus 389 ~~~~~~e~i~~av~~vm----~~~~~~g~~~r~~a~~ 421 (453)
T PLN02764 389 TGWFSKESLRDAINSVM----KRDSEIGNLVKKNHTK 421 (453)
T ss_pred CCccCHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 26678888886655 554 334445444443
No 170
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=89.95 E-value=19 Score=38.66 Aligned_cols=103 Identities=16% Similarity=0.185 Sum_probs=61.1
Q ss_pred CCCCcEEEEEeccCCC-------CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003492 569 DRSKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (816)
Q Consensus 569 ~~~k~iIl~vGRL~~~-------Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L~ 640 (816)
..++++|++....... .+...+.+.+..+.+..|+++++|==. |......+ . ....+. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~H-P~~~~~~~------~----~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPH-PDERGGNK------Y----SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEEC-chhhCCCC------h----hHhhhhhcC-
Confidence 5677888888887653 244556677777766678888776543 22011111 0 222222 33
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
.++.++.. . ..++.++.. +|.+|.-+ +.+-+||+.+|+||++-
T Consensus 182 ~~~~~~~~---~---~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 182 PNVVIIDD---D---VNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVF 224 (269)
T ss_pred CCeEEECC---C---CCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEe
Confidence 33444431 2 245667774 77666542 56889999999999995
No 171
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=89.53 E-value=39 Score=37.61 Aligned_cols=99 Identities=17% Similarity=0.080 Sum_probs=60.1
Q ss_pred cEEEEEec-cCCCCCHH--HHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC--Cc-EEEe
Q 003492 573 PIVFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--GQ-FRWI 646 (816)
Q Consensus 573 ~iIl~vGR-L~~~Kgl~--~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~--~~-V~fl 646 (816)
.+++..|. ..+.|... ...+.+..+.+ .+++++++|+..+ .+...++.+..+-. .+ +.+.
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeecc
Confidence 34455554 23556543 45565555543 3678899987644 33333444333211 12 4455
Q ss_pred ccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 647 G~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
| ..+-.++..+++. |+++|..-. | .+-=|-|.|+|+|+=
T Consensus 248 g----~~sL~el~ali~~-a~l~I~nDT----G-p~HlAaA~g~P~val 286 (348)
T PRK10916 248 G----ETQLEQAVILIAA-CKAIVTNDS----G-LMHVAAALNRPLVAL 286 (348)
T ss_pred C----CCCHHHHHHHHHh-CCEEEecCC----h-HHHHHHHhCCCEEEE
Confidence 6 5678899999995 999998742 2 345578889999983
No 172
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.41 E-value=2.2 Score=45.92 Aligned_cols=99 Identities=16% Similarity=0.095 Sum_probs=63.4
Q ss_pred EEEEEeccCCCCC--HHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003492 574 IVFSMARLDHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (816)
Q Consensus 574 iIl~vGRL~~~Kg--l~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (816)
+++..|.-.+.|. .+...+.+..+.+. +++++++|+..+ .+..+++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 3444444344443 45777777777654 789999987644 334444454443223345566
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~ 696 (816)
..+-.|+..+++. +|++|.+.. |. +-=|.+.|+|+|+=-
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~Ds----g~-~HlA~a~~~p~i~l~ 224 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTNDS----GP-MHLAAALGTPTVALF 224 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeCC----HH-HHHHHHcCCCEEEEE
Confidence 5567899999996 999998842 43 444569999999853
No 173
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=88.92 E-value=47 Score=37.79 Aligned_cols=99 Identities=15% Similarity=0.210 Sum_probs=59.7
Q ss_pred HHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccc
Q 003492 628 EKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEI 703 (816)
Q Consensus 628 ~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~g----G~~Ei 703 (816)
.-.+.++....-..+|.+.. +.. ..++...++. +|++|-.-+. +++=||+.|+|+|+=..- |+.+-
T Consensus 253 ~va~~ia~~~~~~~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~H-----saI~al~~g~p~i~i~Y~~K~~~l~~~ 322 (385)
T COG2327 253 AVADAIAQLVLDSAEILVSS---DEY-AEELGGILAA-CDLIVGMRLH-----SAIMALAFGVPAIAIAYDPKVRGLMQD 322 (385)
T ss_pred HHHHHHHhhcCCccceEeec---chH-HHHHHHHhcc-CceEEeehhH-----HHHHHHhcCCCeEEEeecHHHHHHHHH
Confidence 33344444444346777764 222 3566778884 8888855332 578899999999996432 33333
Q ss_pred cccCCeEE--EECCCCHHHHHHHHHHHHHhhcCCHHHHHH
Q 003492 704 IEHGASGF--HIDPYHPDQAAELMADFFGKCKENPSHWKK 741 (816)
Q Consensus 704 I~dg~~G~--li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (816)
. |-.|+ .+.|.|.+.+.+...+.+. .+++.+++
T Consensus 323 ~--gl~~~~~~i~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 323 L--GLPGFAIDIDPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred c--CCCcccccCCCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 3 33334 4557788888888876653 55655444
No 174
>PLN03004 UDP-glycosyltransferase
Probab=87.28 E-value=8.6 Score=44.82 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=54.9
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccE--EEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEE
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHI 713 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDv--fV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~d-g~~G~li 713 (816)
.++...+ +++..++.. .+++ ||.= +--++++||+++|+|+|+- |.......+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4566666 667766555 4666 5532 2234899999999999996 44455555643 3578777
Q ss_pred CC-----CCHHHHHHHHHHHHHhhcCCHHHHHH
Q 003492 714 DP-----YHPDQAAELMADFFGKCKENPSHWKK 741 (816)
Q Consensus 714 ~p-----~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (816)
+. -+.++++++|.+++ .|++++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~~ 430 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRER 430 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHHH
Confidence 52 26778888886655 67654433
No 175
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=84.30 E-value=4.3 Score=47.39 Aligned_cols=100 Identities=12% Similarity=-0.023 Sum_probs=62.9
Q ss_pred HHHhhCCEEEecCHHHHhhhcccccccccccccccccceeeecCCCCCCCcEEEecCCCcCCCCCCCchHHHHHhhhhcc
Q 003492 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (816)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~~~qy~~~~~~~~p~l~~~~~Gi~~f~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~ 549 (816)
-....+|.+++.|+..+...+..+ ..++ ..++.+.++++|.+.+.+... +...
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~------------------~~L~--~~d~~~~y~ei~~s~~~~~~~-~~~~------ 257 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATF------------------VSLS--NSDITSTYPEIDGSWFTYGQY-ESHL------ 257 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhh------------------hhcC--CCCcceeeccccchhcccccc-ccch------
Confidence 356678999999987765322221 1122 344888999999887765211 1110
Q ss_pred chhhccCccccccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC
Q 003492 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL 603 (816)
Q Consensus 550 i~~~l~~~~~~~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~ 603 (816)
.-....+...|. ...+..+..+-|+.|.||++.+++++.++....++
T Consensus 258 -----~~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~ 304 (495)
T KOG0853|consen 258 -----ELRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPE 304 (495)
T ss_pred -----hcccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccCC
Confidence 001122223444 34467788999999999999999999988765544
No 176
>PLN03015 UDP-glucosyl transferase
Probab=83.78 E-value=98 Score=36.40 Aligned_cols=72 Identities=19% Similarity=0.161 Sum_probs=41.7
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccc-ccCCeEEEEC------CCCHHH
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGASGFHID------PYHPDQ 720 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~----gG~~EiI-~dg~~G~li~------p~d~~~ 720 (816)
+++..++...= +.+.||.-. --++++||+++|+|+|+-.. .-....+ +.-..|.-+. .-..++
T Consensus 342 W~PQ~~vL~h~--~vg~fvtH~----GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSHR--SIGGFLSHC----GWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhccC--ccCeEEecC----CchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 66666666521 134455432 13489999999999999633 3333333 3335566553 124567
Q ss_pred HHHHHHHHH
Q 003492 721 AAELMADFF 729 (816)
Q Consensus 721 lA~~I~~~l 729 (816)
++++|.+++
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 777775554
No 177
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=83.14 E-value=14 Score=41.34 Aligned_cols=164 Identities=13% Similarity=0.163 Sum_probs=107.5
Q ss_pred ccCCCC-CCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCC-eEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 003492 563 HVGTLS-DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL-VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 639 (816)
Q Consensus 563 ~lg~l~-~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~-v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L- 639 (816)
.+|... .+++.+-+|=-++.-.|+-..=+-+..+.-+..|+ +..+.|-.... ..+-..+..++..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~---------~ke~~~F~~f~~~ldlv 250 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYH---------LKEHPTFVNFANSLDLV 250 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchh---------hhcCHHHHHHHHhhHHh
Confidence 355533 22334444555666677643222222222223333 56677766544 1223456666666655
Q ss_pred -CCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003492 640 -DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (816)
Q Consensus 640 -~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~ 718 (816)
+++..|.| +.+ ++.++++..|++|.-.+.-+.-..-.||+--|=|.|-. +..+.+ .|+..+..|.
T Consensus 251 r~gkasfeg----R~~---~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHN-----S~~l~d--~GYYY~~fD~ 316 (364)
T PF10933_consen 251 RDGKASFEG----RFD---FPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHN-----SPLLKD--VGYYYPDFDA 316 (364)
T ss_pred hcCeeEEee----ecC---hHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccC-----cchhcc--cCcCCCCccH
Confidence 57788888 443 57788888899998777667777899999999999974 344533 8999999999
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
.+=++++.+++. +.++.++...+++++.+..
T Consensus 317 ~~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l~~ 347 (364)
T PF10933_consen 317 FEGARQLLRAIR---EHDADLDAYRARARRLLDR 347 (364)
T ss_pred HHHHHHHHHHHH---HccccHHHHHHHHHHHHHh
Confidence 999999988774 5666677777777777664
No 178
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=83.09 E-value=11 Score=42.22 Aligned_cols=103 Identities=11% Similarity=0.050 Sum_probs=64.3
Q ss_pred CCcEEEEEeccCCCCCHH--HHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003492 571 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (816)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (816)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ ++.+..+++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e----------~e~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK----------DDLACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh----------HHHHHHHHHHHhcCCCccccccC-
Confidence 345566767655666554 56666666654 2578888886533 11222334444332223355667
Q ss_pred ccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 649 ~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
..+-.++..+++. |+++|.... | .+-=|-|.|+|+|+=
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nDS----G-p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVDS----A-PAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecCC----H-HHHHHHHcCCCEEEE
Confidence 6678999999995 999998742 3 244467889999984
No 179
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=82.56 E-value=9.8 Score=39.87 Aligned_cols=103 Identities=15% Similarity=0.079 Sum_probs=59.9
Q ss_pred CCCcEEEEEeccCCCCCHHH--HHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003492 570 RSKPIVFSMARLDHVKNMTG--LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~--LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG 647 (816)
+++.+++..|.-.+.|.... ..+.+..+.+.+ ++++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 34456667776667776655 777777777654 78888888643 11222223333222 12577877
Q ss_pred cccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 648 ~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
..+-.++..+++. +|++|.+- +. .+-=|.|.|+|+|+=
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~D---tg--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGND---TG--PMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEES---SH--HHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEecC---Ch--HHHHHHHHhCCEEEE
Confidence 6678899999995 99999883 22 355578899999995
No 180
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=82.06 E-value=3.2 Score=37.52 Aligned_cols=84 Identities=13% Similarity=0.164 Sum_probs=57.1
Q ss_pred EEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHH--HHHHHHccccEEEECCCCCCCc---H
Q 003492 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE--LYRYIADTKGAFVQPAFYEAFG---L 680 (816)
Q Consensus 606 LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~e--l~~~la~aaDvfV~PS~~EgFG---l 680 (816)
++|||+-.+ ....+++.++++|.. +.++|... .....+ +...+.+ +|++|++.-+=+-. .
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 678888433 257888889998863 44444222 333344 8888885 99999987654443 3
Q ss_pred HHHHHHHcCCcEEEcCcccccccc
Q 003492 681 TVVEAMTCGLPTFATCHGGPAEII 704 (816)
Q Consensus 681 tvlEAMA~GlPVIaT~~gG~~EiI 704 (816)
+--+|-..|+|++.+...|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 456778889999999877665543
No 181
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=81.92 E-value=70 Score=34.69 Aligned_cols=86 Identities=12% Similarity=0.098 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccc
Q 003492 587 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 666 (816)
Q Consensus 587 l~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aa 666 (816)
+..+++++..+.+.. +.+++++..... .| .+..+++.+.+.-...| +. ..+..|+...+++ +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 456677777765542 456656553321 11 23344444444333333 23 4567889999996 9
Q ss_pred cEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 667 GAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 667 DvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
+++|--.+. ..+=|+++|+|+++-
T Consensus 252 ~~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEechH-----HHHHHHHcCCCEEEe
Confidence 988866543 578899999999975
No 182
>PLN02167 UDP-glycosyltransferase family protein
Probab=80.23 E-value=46 Score=39.06 Aligned_cols=79 Identities=16% Similarity=0.157 Sum_probs=48.2
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccc-ccccCCeEEEECC
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAE-IIEHGASGFHIDP 715 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~E-iI~dg~~G~li~p 715 (816)
++....+ +++..++...= +.++||.-. |+ .+++||+++|+|+|+- |..-... +++.-+.|..+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH~---G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSHC---GW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEeeC---Cc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3445556 67777666421 245677542 22 3899999999999996 3333332 3444456776642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003492 716 ---------YHPDQAAELMADFF 729 (816)
Q Consensus 716 ---------~d~~~lA~~I~~~l 729 (816)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 25677888886655
No 183
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=79.78 E-value=25 Score=41.88 Aligned_cols=194 Identities=12% Similarity=0.070 Sum_probs=120.8
Q ss_pred ccccCCCCCCCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003492 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (816)
Q Consensus 561 ~~~lg~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~ 640 (816)
+..+|+ +++..++...-.+- |=-...++.+.++.+.-|+-.|++.--... ..+.++..+.+.|++
T Consensus 750 r~~y~L--p~d~vvf~~FNqLy--KidP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl~ 814 (966)
T KOG4626|consen 750 RSQYGL--PEDAVVFCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGLE 814 (966)
T ss_pred CCCCCC--CCCeEEEeechhhh--cCCHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCCC
Confidence 345666 55555555555553 444677788888888788888877654322 136788889999994
Q ss_pred -CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccc-----cccCCeEEEEC
Q 003492 641 -GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI-----IEHGASGFHID 714 (816)
Q Consensus 641 -~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~Ei-----I~dg~~G~li~ 714 (816)
++|.|.. -...+|-.+-.. -+||.+-+...-|- .|-.|.+.+|+|+|+-...-.+.- +.--..|-++
T Consensus 815 p~riifs~----va~k~eHvrr~~-LaDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli- 887 (966)
T KOG4626|consen 815 PDRIIFSP----VAAKEEHVRRGQ-LADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI- 887 (966)
T ss_pred ccceeecc----ccchHHHHHhhh-hhhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-
Confidence 7888886 333455444444 38888877665542 356788999999997432111111 1111233333
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHhhhhHHhcHHH
Q 003492 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVYGFWKYVSKLE 785 (816)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y~~~~~~~~~~ 785 (816)
..+-++..+.-.+ +..|.+..+++...-+..-.. -+-|+-.+++..++.+|. .-|+.-.+-+
T Consensus 888 ak~~eEY~~iaV~----Latd~~~L~~lr~~l~~~r~~---splfd~~q~~~~LE~~y~--~MW~~y~~G~ 949 (966)
T KOG4626|consen 888 AKNREEYVQIAVR----LATDKEYLKKLRAKLRKARAS---SPLFDTKQYAKGLERLYL--QMWKKYCSGE 949 (966)
T ss_pred hhhHHHHHHHHHH----hhcCHHHHHHHHHHHHHHhcC---CCccCchHHHHHHHHHHH--HHHHHhccCC
Confidence 2355665555433 448888888886655443222 357999999999999875 5687755433
No 184
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=78.15 E-value=18 Score=39.87 Aligned_cols=100 Identities=17% Similarity=0.079 Sum_probs=62.5
Q ss_pred CCcE-EEEEec-cCCCCCHH--HHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003492 571 SKPI-VFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (816)
Q Consensus 571 ~k~i-Il~vGR-L~~~Kgl~--~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~fl 646 (816)
++++ ++..|. ..+.|... ...+.+..+.+. +.+++++|+..+ .+..+++.+..+ ...+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-cccccCC
Confidence 3444 455554 34666655 666666666542 578899987644 233333333322 1223356
Q ss_pred ccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 647 G~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
| ..+-.++..+++. +|++|..-. | .+-=|-|.|+|+|+=
T Consensus 238 g----~~sL~el~ali~~-a~l~I~~DS----G-p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 G----ETSLDEAVDLIAL-AKAVVTNDS----G-LMHVAAALNRPLVAL 276 (334)
T ss_pred C----CCCHHHHHHHHHh-CCEEEeeCC----H-HHHHHHHcCCCEEEE
Confidence 6 6678899999995 999998742 2 344567899999984
No 185
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=77.25 E-value=20 Score=36.14 Aligned_cols=63 Identities=21% Similarity=0.109 Sum_probs=42.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEE
Q 003492 406 GFPDFIIGNYSDGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (816)
Q Consensus 406 ~kPDIIh~h~~~~~lva~lla~~~------gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~II 479 (816)
.+||+|++|.+..+....++++.+ |.++|++--- ...+.+ .. .-++...-||.++
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~-aRv~~l-------------Sl-----TGklly~~aD~f~ 151 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESF-ARVKTL-------------SL-----TGKLLYPFADRFI 151 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEee-eecCCC-------------ch-----HHHHHHHhCCEEE
Confidence 489999999999888888888888 8888875321 000000 00 1234566799999
Q ss_pred ecCHHHHh
Q 003492 480 TSTYQEIA 487 (816)
Q Consensus 480 t~S~~~~~ 487 (816)
+.-++.++
T Consensus 152 VQW~~l~~ 159 (170)
T PF08660_consen 152 VQWEELAE 159 (170)
T ss_pred EcCHHHHh
Confidence 98887765
No 186
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=75.46 E-value=28 Score=38.13 Aligned_cols=99 Identities=14% Similarity=-0.015 Sum_probs=63.1
Q ss_pred CCcEEEEEeccCCCCCH--HHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003492 571 SKPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (816)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl--~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (816)
++.+++..|.=.+.|.. +...+.+..+.+. +++++++|+++. +.+..+++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~---~~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP---GAVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC---CCeecC-
Confidence 34456666654566665 3666666666542 578888866543 2333344444332 235566
Q ss_pred ccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 649 ~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
..+-.++..+++. |+++|..-. - .+-=|-|.|+|+|+=
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~DS---g--p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGVDT---G--LTHLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeCCC---h--HHHHHHHcCCCEEEE
Confidence 6678899999995 999998742 2 344467889999984
No 187
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=75.25 E-value=24 Score=39.19 Aligned_cols=101 Identities=14% Similarity=0.075 Sum_probs=61.7
Q ss_pred cEEEEEeccCCCCCH--HHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003492 573 PIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (816)
Q Consensus 573 ~iIl~vGRL~~~Kgl--~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (816)
.+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ .+.+..+++.+..+-...+.+.|
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~----------~e~~~~~~i~~~~~~~~~~~l~g--- 247 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK----------DELAMVNEIAQGCQTPRVTSLAG--- 247 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH----------HHHHHHHHHHhhCCCCcccccCC---
Confidence 445566654455544 455555555544 2578899986532 11222333333333222344666
Q ss_pred CcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 651 ~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
..+-.++..+++. ++++|... +- .+-=|-|.|+|+|+=
T Consensus 248 -~~sL~el~ali~~-a~l~Vs~D---SG--p~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 -KLTLPQLAALIDH-ARLFIGVD---SV--PMHMAAALGTPLVAL 285 (344)
T ss_pred -CCCHHHHHHHHHh-CCEEEecC---CH--HHHHHHHcCCCEEEE
Confidence 6778999999996 99999873 22 355578899999984
No 188
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=75.22 E-value=50 Score=36.39 Aligned_cols=111 Identities=16% Similarity=0.129 Sum_probs=65.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecc--cCCCCCCccCc--cceeecCCCceEEEEecCCCccccccc
Q 003492 303 GQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL--IPDAKGTTCNQ--RLERVSGTEHTHILRVPFRSEKGILRQ 378 (816)
Q Consensus 303 G~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~--~p~~~~~~~~~--~~e~v~g~~~v~I~rvp~~~~~~~~~~ 378 (816)
|-...+. .|...|.++||.|- |+.-. .|-..|.-..+ +.......+|+-+..+|.+...|
T Consensus 63 GKSTli~--------~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG---- 126 (323)
T COG1703 63 GKSTLIE--------ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG---- 126 (323)
T ss_pred chHHHHH--------HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch----
Confidence 5666677 77888899999998 55433 23233333332 33444445678888888776533
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCC
Q 003492 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALE 441 (816)
Q Consensus 379 ~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~ 441 (816)
.+..-..++...+-+ ..+|+|+.-+.-.+-.-.-++..-.+-++++..+.+
T Consensus 127 ---------GlS~at~~~i~~ldA---aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~G 177 (323)
T COG1703 127 ---------GLSRATREAIKLLDA---AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAG 177 (323)
T ss_pred ---------hhhHHHHHHHHHHHh---cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCC
Confidence 122233334433333 379999988776544444455555666666666543
No 189
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=74.51 E-value=22 Score=39.50 Aligned_cols=98 Identities=19% Similarity=0.122 Sum_probs=68.2
Q ss_pred CcEEEEEe-ccCCCCCHH--HHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003492 572 KPIVFSMA-RLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (816)
Q Consensus 572 k~iIl~vG-RL~~~Kgl~--~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~ 648 (816)
+.+++..| .-...|+.+ ...+.+..+.+.. .+++++|+..+ .+..+++.+.++ +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC-
Confidence 45666777 555677655 6667777776654 88999998733 455555666554 2233666
Q ss_pred ccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 649 ~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
..+-.++..+++. ||++|.+.. |+ +-=|-|.|+|+|+-
T Consensus 239 ---k~sL~e~~~li~~-a~l~I~~DS----g~-~HlAaA~~~P~I~i 276 (334)
T COG0859 239 ---KTSLEELAALIAG-ADLVIGNDS----GP-MHLAAALGTPTIAL 276 (334)
T ss_pred ---CCCHHHHHHHHhc-CCEEEccCC----hH-HHHHHHcCCCEEEE
Confidence 7778999999995 999998843 33 34477889999995
No 190
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=71.61 E-value=23 Score=36.15 Aligned_cols=69 Identities=16% Similarity=0.061 Sum_probs=28.2
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHHHH
Q 003492 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (816)
Q Consensus 407 kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (816)
+||+++.-......--...+++.|+|++..--.+... +-..|+.+.. .-...++.-|.|.+.|+...
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~----s~~~~~~~~~---------~~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSER----SFRRYRRFPF---------LFRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE------------------H---------HHHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccc----cchhhhhhHH---------HHHHHHHhCCEEEECCHHHH
Confidence 7999987766543333445667799987643322111 1111111111 12246788999999999887
Q ss_pred hh
Q 003492 487 AG 488 (816)
Q Consensus 487 ~~ 488 (816)
+.
T Consensus 162 ~r 163 (186)
T PF04413_consen 162 ER 163 (186)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 191
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=71.17 E-value=5.1 Score=43.35 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=48.3
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCC----CChhhh-hhhhhhhhchhhhhHHHHHHhhCCEEE
Q 003492 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYW-KKFDEKYHFSCQFTADLIAMNNADFII 479 (816)
Q Consensus 406 ~kPDIIh~h~~~-~~lva~lla~~~gip~v~t~H~l~~~k~~----~~~~~~-~~~~~~y~f~~~~~~e~~a~~~AD~II 479 (816)
.+.||.|+.+.- ++++|++++.+.|+|++.|-|+....... .+++.+ ...-+..........-..++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 356999976654 58999999999999999999986322110 111110 000011111111122346799999999
Q ss_pred ecCHHHH
Q 003492 480 TSTYQEI 486 (816)
Q Consensus 480 t~S~~~~ 486 (816)
+.++...
T Consensus 251 ~l~~~n~ 257 (268)
T PF11997_consen 251 PLYEYNR 257 (268)
T ss_pred ccchhhH
Confidence 9887543
No 192
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=71.02 E-value=37 Score=35.03 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=25.8
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccC
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIP 342 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p 342 (816)
||||+....|+-. ..+. .|.+.|++.||+|. |+.+...
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESSS
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCCC
Confidence 8999999988722 2244 56667877789999 9976643
No 193
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=70.61 E-value=4.2 Score=38.44 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=21.3
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecc
Q 003492 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (816)
Q Consensus 301 ~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~ 340 (816)
++|-..-.+ .|+++|+++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 467666667 78888999999999 88754
No 194
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=70.03 E-value=1.4e+02 Score=31.59 Aligned_cols=125 Identities=9% Similarity=-0.014 Sum_probs=66.7
Q ss_pred CeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcH-H
Q 003492 603 LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGL-T 681 (816)
Q Consensus 603 ~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGl-t 681 (816)
++++.||..... +++.++++ .++|+|.-. ....++ +.. +++++..+--+...- .
T Consensus 48 gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~LViaATdD~~vN~~I 102 (223)
T PRK05562 48 GCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KHLIVIATDDEKLNNKI 102 (223)
T ss_pred CCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-CcEEEECCCCHHHHHHH
Confidence 567777776554 23333333 356777751 222222 333 555554433333333 3
Q ss_pred HHHHHHcCCcEEEcCcccccccc-----ccCCeEEEE-CCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 682 VVEAMTCGLPTFATCHGGPAEII-----EHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 682 vlEAMA~GlPVIaT~~gG~~EiI-----~dg~~G~li-~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
.-+|.+.|.+|.+.+.....+++ ..|.--+.+ ..+....+|..|.+-++.++.+-+.+-++....|..+.+
T Consensus 103 ~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~~l~~~R~~vk~ 179 (223)
T PRK05562 103 RKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIEYVTKIRNKAKK 179 (223)
T ss_pred HHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45666779999988765544443 333222222 233445677777777766664445555566666666665
No 195
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=69.78 E-value=1.3e+02 Score=32.58 Aligned_cols=151 Identities=17% Similarity=0.148 Sum_probs=84.1
Q ss_pred CcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003492 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (816)
.+.++.++.=.++|+++.+++++++.+. .+.+-..|.|.. + .-....+.++.|+. ++++++...
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~-----~------hl~~~~l~~~~G~~--~~~Vpy~G~ 141 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS-----D------HLAAALLAKAAGIK--FTHVPYDGG 141 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH-----H------HHHHHHHHHHHT-----EEEE-SSH
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch-----H------HHHHHHHHHHhCCc--eEEEEeCCc
Confidence 3567777777799999999999886543 244443333321 1 11334456677764 455553222
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCC-cEEE-c---Cc------c-----ccccccccCCeEEEECC
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFA-T---CH------G-----GPAEIIEHGASGFHIDP 715 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~Gl-PVIa-T---~~------g-----G~~EiI~dg~~G~li~p 715 (816)
.+.+..++....|+.+.. .-......-.|. -+++ + +. + |..++....-.|+.+++
T Consensus 142 ---~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~ 212 (274)
T PF03401_consen 142 ---AEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPK 212 (274)
T ss_dssp ---HHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEET
T ss_pred ---cHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCC
Confidence 345666666667776653 112333444443 1122 1 11 1 12222233446899999
Q ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003492 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (816)
Q Consensus 716 ~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar 747 (816)
+.+++..+.+.+++++..+||+..+.+.+.+.
T Consensus 213 gtp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 213 GTPDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp TS-HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 99999999999999999999998777665553
No 196
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=68.25 E-value=39 Score=37.10 Aligned_cols=96 Identities=16% Similarity=0.109 Sum_probs=59.6
Q ss_pred EEEEEeccCCCCCHH--HHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003492 574 IVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (816)
Q Consensus 574 iIl~vGRL~~~Kgl~--~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (816)
+++..|.-.+.|... ...+.+..+.+. +.++++.|+++. +.+..+++.+.. ..+.+.|
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~~-----------e~~~~~~i~~~~---~~~~l~g---- 240 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAEH-----------EEQRAKRLAEGF---PYVEVLP---- 240 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHccC---CcceecC----
Confidence 333444433445544 566766666542 567777644433 123333333322 3466777
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT 695 (816)
..+-.++...++. ||++|.... | ..-=|-|+|+|+|+=
T Consensus 241 ~~sL~elaali~~-a~l~I~nDS----G-p~HlA~A~g~p~val 278 (322)
T PRK10964 241 KLSLEQVARVLAG-AKAVVSVDT----G-LSHLTAALDRPNITL 278 (322)
T ss_pred CCCHHHHHHHHHh-CCEEEecCC----c-HHHHHHHhCCCEEEE
Confidence 6678999999995 999998743 2 355678899999994
No 197
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=64.21 E-value=21 Score=35.53 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=36.5
Q ss_pred CCCceEEEEcCCCchHH-HHHHHHH--c-CCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEe
Q 003492 405 QGFPDFIIGNYSDGNLV-ASLLAYK--M-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (816)
Q Consensus 405 ~~kPDIIh~h~~~~~lv-a~lla~~--~-gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (816)
+.+||+|+|.++.++.+ ...+.++ . ++|+++.+-++.... ..| .-..+|..++
T Consensus 87 ~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-----~~W------------------~~~~~D~y~V 143 (169)
T PF06925_consen 87 EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-----PFW------------------IHPGVDRYFV 143 (169)
T ss_pred hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-----cCe------------------ecCCCCEEEE
Confidence 45999999988876444 3333333 3 477665544432100 012 2347899999
Q ss_pred cCHHHHhh
Q 003492 481 STYQEIAG 488 (816)
Q Consensus 481 ~S~~~~~~ 488 (816)
.|++..+.
T Consensus 144 ase~~~~~ 151 (169)
T PF06925_consen 144 ASEEVKEE 151 (169)
T ss_pred CCHHHHHH
Confidence 99887763
No 198
>PLN02207 UDP-glycosyltransferase
Probab=64.01 E-value=2.5e+02 Score=33.07 Aligned_cols=79 Identities=13% Similarity=0.093 Sum_probs=48.3
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEEC-
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHID- 714 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI~d-g~~G~li~- 714 (816)
+++...+ +.+..++...= +.+.||.-. | -.+++||+.+|+|+|+- |.......+.+ -+.|+-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvTH~---G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVSHC---G-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeeecC---c-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 4555556 67777776531 244566431 1 23789999999999996 33344444333 44566331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 003492 715 --------PYHPDQAAELMADFF 729 (816)
Q Consensus 715 --------p~d~~~lA~~I~~~l 729 (816)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 226678888887766
No 199
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=60.54 E-value=2.4e+02 Score=32.67 Aligned_cols=165 Identities=13% Similarity=0.115 Sum_probs=84.8
Q ss_pred CcEEEEEeccCC-----CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcC--CCCcEE
Q 003492 572 KPIVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK--LDGQFR 644 (816)
Q Consensus 572 k~iIl~vGRL~~-----~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~--L~~~V~ 644 (816)
..++++.|.... .+-...++.+++++ +++.|+++=..... .. +.+... ..++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~------------~~---~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS------------IY---FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc------------hh---hhhcCCCCCcCceE
Confidence 456667777653 33445555565554 45666666554330 00 122221 135687
Q ss_pred EeccccCcCChHHHHHHHHcc-ccEEEECCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCCeEEEECC--C
Q 003492 645 WIAAQTNRARNGELYRYIADT-KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP--Y 716 (816)
Q Consensus 645 flG~~~~~v~~~el~~~la~a-aDvfV~PS~~EgFGltvlEAMA~GlPVIaT----~~gG~~EiI-~dg~~G~li~p--~ 716 (816)
..+ +++..++. ++.. .++||.= -|++ +++||+.+|+|+|+. |..-.+..+ ++|..|....- .
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvTH---gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~ 408 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVTH---GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLV 408 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEEC---Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcC
Confidence 766 66666654 2221 3344432 2344 459999999999964 333344444 44555554432 1
Q ss_pred CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHhh
Q 003492 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVYG 776 (816)
Q Consensus 717 d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y~ 776 (816)
+.+ +.+++.+++ .++++.+...+-+...-.+ ..+- ..+..+.+.-..++
T Consensus 409 ~~~-~~~~~~~il----~~~~y~~~~~~l~~~~~~~-----p~~~-~~~~~~~e~~~~~~ 457 (496)
T KOG1192|consen 409 SEE-LLEAIKEIL----ENEEYKEAAKRLSEILRDQ-----PISP-ELAVKWVEFVARHG 457 (496)
T ss_pred cHH-HHHHHHHHH----cChHHHHHHHHHHHHHHcC-----CCCH-HHHHHHHHHHHhcC
Confidence 222 556665444 7887766655544443333 3444 44444444444433
No 200
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=60.47 E-value=40 Score=33.87 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=39.9
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhhhhhhhchhhhhHHHHHHhhCCEEEecCHH
Q 003492 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (816)
Q Consensus 406 ~kPDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~k~~~~~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (816)
..+|+|.+.+-.. .-...+.....++|.++-+|-.... ||.+...-+.. .|.+. ...+.-.||.|+.+|..
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~-YP~~~~~~rd~--~~~~~-----ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLA-YPVSPGQERDF--QYGMN-----NIYSALAADRVVFNSAF 129 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCccc-CCCCCCccccc--cHHHH-----HHHHHHhceeeeecchh
Confidence 4689999766432 2222222234579999999975432 33222111111 11111 22344579999999976
Q ss_pred HHh
Q 003492 485 EIA 487 (816)
Q Consensus 485 ~~~ 487 (816)
-.+
T Consensus 130 nr~ 132 (168)
T PF12038_consen 130 NRD 132 (168)
T ss_pred hHH
Confidence 554
No 201
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=57.65 E-value=2.3e+02 Score=29.06 Aligned_cols=39 Identities=18% Similarity=0.289 Sum_probs=32.0
Q ss_pred cCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 003492 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (816)
Q Consensus 652 ~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~ 696 (816)
..+..++...++. ++++|...+. ..+=|+++|+|+|+-.
T Consensus 245 ~~~~~~~~~~~~~-~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 245 SLSPDELLELISQ-ADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred CCCHHHHHHHHhc-CCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 5667899999995 9999977653 4778999999999854
No 202
>PLN02534 UDP-glycosyltransferase
Probab=56.46 E-value=4e+02 Score=31.52 Aligned_cols=45 Identities=11% Similarity=0.044 Sum_probs=30.3
Q ss_pred CcEEEeccccCcCChHHHHHHHHccccE--EEECCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003492 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATCH 697 (816)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aaDv--fV~PS~~EgFGltvlEAMA~GlPVIaT~~ 697 (816)
.++.+.| +++..++.. +.++ ||.- +-..+++||+++|+|+|+-..
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~ 390 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPL 390 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccc
Confidence 4566666 666666554 3444 6644 334589999999999999643
No 203
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=55.40 E-value=2.4e+02 Score=28.58 Aligned_cols=44 Identities=16% Similarity=0.437 Sum_probs=30.7
Q ss_pred CCCCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEeccc
Q 003492 274 RLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 341 (816)
Q Consensus 274 ~~p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~ 341 (816)
+++|.|||.|-.+ |.. |-...+. .+++.|.+.|+.|- -++|...
T Consensus 1 ~~~~~mki~ITG~------------PGv-GKtTl~~--------ki~e~L~~~g~kvg---Gf~t~EV 44 (179)
T COG1618 1 MIKMAMKIFITGR------------PGV-GKTTLVL--------KIAEKLREKGYKVG---GFITPEV 44 (179)
T ss_pred CCCcceEEEEeCC------------CCc-cHHHHHH--------HHHHHHHhcCceee---eEEeeee
Confidence 3578899987533 222 5666677 78889999999987 4566543
No 204
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=54.27 E-value=37 Score=36.53 Aligned_cols=54 Identities=19% Similarity=0.019 Sum_probs=33.0
Q ss_pred ccEEEECCCCC--CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHH
Q 003492 666 KGAFVQPAFYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (816)
Q Consensus 666 aDvfV~PS~~E--gFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~ 727 (816)
+|++|.=-..+ |+--++--|+.+|.|||.=+-+-... + +-.+ .+.+++.+.+.+
T Consensus 198 i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~--~~~~--~~~~el~~~l~~ 253 (256)
T TIGR00715 198 IDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----G--VAIF--DDISQLNQFVAR 253 (256)
T ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----C--CccC--CCHHHHHHHHHH
Confidence 56777654433 45567888999999999876654311 0 0112 367776666643
No 205
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=53.62 E-value=46 Score=40.74 Aligned_cols=43 Identities=35% Similarity=0.540 Sum_probs=28.0
Q ss_pred CCCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecc
Q 003492 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (816)
Q Consensus 275 ~p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~ 340 (816)
-|..+||++||||-- ..++| .|| ...+|+++||+|+ |+++|..
T Consensus 366 ~~~~~rvLv~spHPD---Devi~---~GG---------------Tlarl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 366 LPYPKRVIIFSPHPD---DDVIS---MGG---------------TFRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred ccCCceEEEEEeCCC---chHhh---hHH---------------HHHHHHHCCCcEE--EEEecCC
Confidence 356799999999952 33443 244 2245799999999 4445543
No 206
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=52.97 E-value=20 Score=40.91 Aligned_cols=45 Identities=24% Similarity=0.536 Sum_probs=31.5
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCCCCCCccCccce
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e 354 (816)
|||++|....+ |+++|.. |.+.||+|. .|+| +|+..|......+|
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~~d~l~~e 45 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGKADPLGLE 45 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCCcCccccc
Confidence 78999986555 7888887 899999985 3454 67766654443333
No 207
>COG1647 Esterase/lipase [General function prediction only]
Probab=52.58 E-value=55 Score=34.51 Aligned_cols=45 Identities=22% Similarity=0.263 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003492 393 TEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (816)
Q Consensus 393 ~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 439 (816)
+.+..+.+.. .+-.-|..+--+.|+..+..++....++-++.+-+
T Consensus 72 v~d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a 116 (243)
T COG1647 72 VEDGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCA 116 (243)
T ss_pred HHHHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceeeecC
Confidence 3344444443 34556667788999999999999887665554443
No 208
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=52.49 E-value=32 Score=37.04 Aligned_cols=70 Identities=10% Similarity=0.151 Sum_probs=47.1
Q ss_pred hHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCC-cEEEcCc--cccccccccCCeEEEECCCCHHHHHHHH
Q 003492 655 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATCH--GGPAEIIEHGASGFHIDPYHPDQAAELM 725 (816)
Q Consensus 655 ~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~Gl-PVIaT~~--gG~~EiI~dg~~G~li~p~d~~~lA~~I 725 (816)
..+....|++ +..+++|.-...+..-+.|||++|| |||.++. -...++|.=....+.++..+..++.+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456677775 7788888777668889999999995 7776642 2345566445566777766665554444
No 209
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=51.12 E-value=2.6e+02 Score=30.15 Aligned_cols=34 Identities=29% Similarity=0.460 Sum_probs=22.3
Q ss_pred CCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003492 405 QGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 405 ~~kPDIIh~--h~---------~~~~lva~lla~~~gip~v~t~H 438 (816)
..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 89 ~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 89 PEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred CCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 458999984 21 11235567777788999876544
No 210
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=48.44 E-value=3.9e+02 Score=30.09 Aligned_cols=127 Identities=9% Similarity=-0.042 Sum_probs=70.5
Q ss_pred CCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHH----HHHHccccEEEECC--CC
Q 003492 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY----RYIADTKGAFVQPA--FY 675 (816)
Q Consensus 602 p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~----~~la~aaDvfV~PS--~~ 675 (816)
.+.+++++|.|.. -+..-+...+.|. .+|.+...+....+.++++ .+... +|+++..| ..
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 4579999999854 2333333334555 4688877554555666655 55664 89999753 22
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccc--cCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 676 EgFGltvlEAMA~GlPVIaT~~gG~~EiI~--dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
-+.+....|.+..-.+-+.-|..-|+++=. ...+-.++ |.+++.+.+.+ |-..|++....+...+++
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~~-------n~~~R~~~~~~ae~iI~~ 307 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQK-------HLQCRKEVNNKHKLSLRE 307 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 344555555554322245567777776631 12223344 67776666633 334455555555555443
No 211
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=47.28 E-value=1.9e+02 Score=34.55 Aligned_cols=155 Identities=14% Similarity=0.139 Sum_probs=96.4
Q ss_pred CCcEEEEEeccC-CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003492 571 SKPIVFSMARLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (816)
Q Consensus 571 ~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (816)
.++..+..|.-. -+||-+..++++.+.. .++-.|.+.... ...+++-|.=+|
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~~---------------------~~~~P~~V~NHG-- 328 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQR---------------------PPNVPSFVKNHG-- 328 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCCC---------------------CcccchhhhhcC--
Confidence 344555566544 3677788888776543 244444333221 123444566666
Q ss_pred cCcCChHHHHHHHHccccEEEECCC-CCCCcHHHHHHHHcCCcEEEcCcccccc-------------------------c
Q 003492 650 TNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAE-------------------------I 703 (816)
Q Consensus 650 ~~~v~~~el~~~la~aaDvfV~PS~-~EgFGltvlEAMA~GlPVIaT~~gG~~E-------------------------i 703 (816)
..+..|+...+.. +-+||---. +| |-+-+||+|.|+|.|-.....+.. .
T Consensus 329 --~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~ 403 (559)
T PF15024_consen 329 --ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEF 403 (559)
T ss_pred --cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhh
Confidence 6677899999996 889986543 45 346899999999998875433321 1
Q ss_pred cccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHHhh
Q 003492 704 IEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGVYG 776 (816)
Q Consensus 704 I~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~y~ 776 (816)
|. .-.-+.++-+|.+++-++|.+++. .+- + -++-..||-+.+.+|+-.+.+.-.
T Consensus 404 iG-~PhVytVd~~n~~~v~~Avk~il~----~~v-------------~-Py~P~efT~egmLeRv~~~ie~q~ 457 (559)
T PF15024_consen 404 IG-EPHVYTVDINNSTEVEAAVKAILA----TPV-------------E-PYLPYEFTCEGMLERVNALIEKQD 457 (559)
T ss_pred CC-CCeEEEEcCCCHHHHHHHHHHHHh----cCC-------------C-CcCCcccCHHHHHHHHHHHHHhhh
Confidence 21 123577888899999999977763 221 1 122226899999998877655433
No 212
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=46.84 E-value=20 Score=36.69 Aligned_cols=33 Identities=18% Similarity=0.457 Sum_probs=26.3
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecc
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~ 340 (816)
|||+||+..|+-| ++++++..++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~G-------------------------s~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAG-------------------------SRILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhH-------------------------HHHHHHHHhCCCeeE----EEEeC
Confidence 7999999887632 156677899999999 88776
No 213
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=45.36 E-value=3.3e+02 Score=27.26 Aligned_cols=107 Identities=19% Similarity=0.252 Sum_probs=56.7
Q ss_pred HHHHHHHHCCCceeecceEEecccCCCCCCccCccceeecCCCceEEEEecCCCcccccccccccccchhhHH-HHHHHH
Q 003492 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLE-TFTEDV 396 (816)
Q Consensus 318 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~-~f~~~~ 396 (816)
.++.+|..+|+.|. -++-+..+...+..|.-.+..+.....+.|.- ..++ ...-..+. .-...+
T Consensus 18 ~~a~~L~~~G~rv~---G~vQ~~~~~~~~~~~~m~l~dl~~G~~~~IsQ-~LG~-----------gs~gCrLD~~~La~A 82 (159)
T PF10649_consen 18 AFAARLRARGVRVA---GLVQRNTADGDGGRCDMDLRDLPSGRRIRISQ-DLGP-----------GSRGCRLDPGALAEA 82 (159)
T ss_pred HHHHHHHhCCCeEE---EEeccccCCCCCCccceEEEECCCCCEEEEee-ccCC-----------CCcccccCHHHHHHH
Confidence 67788999999987 34433333444444555555554433232221 1111 01111111 112233
Q ss_pred HHHHHHHhCCCceEEEEcCCC-----c-hHHHHHH-HHHcCCcEEEEecC
Q 003492 397 GSEITAELQGFPDFIIGNYSD-----G-NLVASLL-AYKMGITQCTIAHA 439 (816)
Q Consensus 397 ~~~i~~~l~~kPDIIh~h~~~-----~-~lva~ll-a~~~gip~v~t~H~ 439 (816)
...+...+...||+++.|-+- + ++...+. +-..|+|+++.+..
T Consensus 83 ~~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 83 SAALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 344555566689999998763 2 3443333 34469999998874
No 214
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=45.29 E-value=64 Score=36.97 Aligned_cols=82 Identities=10% Similarity=-0.018 Sum_probs=52.8
Q ss_pred HHcCCcEEEcCc---cccccccccCCeEEEECC-CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCH
Q 003492 686 MTCGLPTFATCH---GGPAEIIEHGASGFHIDP-YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTW 761 (816)
Q Consensus 686 MA~GlPVIaT~~---gG~~EiI~dg~~G~li~p-~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw 761 (816)
|+||-.|+.... .-..+.+.++++-+-+.. +|..++.++| +.+.+|++..++|+++|++.+.+ ..+.
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v----~w~~~~~~~A~~IA~~g~~f~~~-----~L~~ 304 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKV----EWLNAHDDEAQRIAENGQRFARE-----YLTM 304 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHh----hhcccChHHHHHHHHHHHHHHHH-----Hhhh
Confidence 555555554321 112223345555555654 4678888888 44558999999999999999988 6777
Q ss_pred HHHHHHHHHHHHHhh
Q 003492 762 KIYSERLMTLAGVYG 776 (816)
Q Consensus 762 ~~~a~~ll~ly~~y~ 776 (816)
+.+..=+..+...|+
T Consensus 305 ~~~~~Y~~~LL~eYa 319 (395)
T PF05686_consen 305 EDVYCYWRRLLLEYA 319 (395)
T ss_pred hHHHHHHHHHHHHHH
Confidence 766666666555553
No 215
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=44.45 E-value=3.7e+02 Score=28.72 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=22.4
Q ss_pred CCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003492 405 QGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 405 ~~kPDIIh~--h~---------~~~~lva~lla~~~gip~v~t~H 438 (816)
..+||+|.+ |. ..|...|++-+...|+|-+..-.
T Consensus 84 ~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 84 PEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred cCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEe
Confidence 558999984 22 11235567777788999876554
No 216
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=44.22 E-value=1.3e+02 Score=31.72 Aligned_cols=51 Identities=22% Similarity=0.251 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCceEEE-EcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003492 388 YLETFTEDVGSEITAELQGFPDFII-GNYSDG-NLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 388 yl~~f~~~~~~~i~~~l~~kPDIIh-~h~~~~-~lva~lla~~~gip~v~t~H 438 (816)
|.+.+.....+.+-.+++...-|+- .||..+ -.--...++.+..|+|++.-
T Consensus 56 yres~~ks~~rlldSalkn~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALKNYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhcceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 5566767777766666553332332 355444 23334566778889887654
No 217
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=43.45 E-value=3.9e+02 Score=27.59 Aligned_cols=135 Identities=11% Similarity=0.042 Sum_probs=69.3
Q ss_pred HHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEE
Q 003492 591 VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 670 (816)
Q Consensus 591 ieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV 670 (816)
...+..+.+. ++++.++..... +.+.+++++ ++|.|... .... ..+.. +++++
T Consensus 22 ~rk~~~Ll~~--ga~VtVvsp~~~-------------~~l~~l~~~----~~i~~~~~---~~~~----~dl~~-~~lVi 74 (205)
T TIGR01470 22 LRKARLLLKA--GAQLRVIAEELE-------------SELTLLAEQ----GGITWLAR---CFDA----DILEG-AFLVI 74 (205)
T ss_pred HHHHHHHHHC--CCEEEEEcCCCC-------------HHHHHHHHc----CCEEEEeC---CCCH----HHhCC-cEEEE
Confidence 3334444443 466777765443 334444433 36777651 1222 23443 66655
Q ss_pred ECCC-CCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCCeEEEE-CCCCHHHHHHHHHHHHHhhcC-CHHHHHHH
Q 003492 671 QPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEII-----EHGASGFHI-DPYHPDQAAELMADFFGKCKE-NPSHWKKI 742 (816)
Q Consensus 671 ~PS~-~EgFGltvlEAMA~GlPVIaT~~gG~~EiI-----~dg~~G~li-~p~d~~~lA~~I~~~l~~l~~-dp~~~~~m 742 (816)
..+- .|----..-+|-..|+||-+.+.....+++ ..|.--+-+ ..+....++..|.+-++.++. +-+.+-++
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~~ 154 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLATL 154 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHHH
Confidence 4432 223333566777889999777655544443 333322222 233445677777766666553 33344455
Q ss_pred HHHHHHHHHh
Q 003492 743 SDGGLKRIYE 752 (816)
Q Consensus 743 s~~ar~~~~~ 752 (816)
....|..+.+
T Consensus 155 ~~~~R~~~k~ 164 (205)
T TIGR01470 155 AATWRDAVKK 164 (205)
T ss_pred HHHHHHHHHh
Confidence 5556666654
No 218
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=40.55 E-value=1.1e+02 Score=33.00 Aligned_cols=83 Identities=11% Similarity=0.043 Sum_probs=52.7
Q ss_pred HHHcCCcEEEcCc---cccccccccCCeEEEECCCCH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCC
Q 003492 685 AMTCGLPTFATCH---GGPAEIIEHGASGFHIDPYHP-DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERIIICRYT 760 (816)
Q Consensus 685 AMA~GlPVIaT~~---gG~~EiI~dg~~G~li~p~d~-~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~yt 760 (816)
-|+|+-.||.... .-.-+.+.++..=+-+..+.. +++.++|..+ .++|+..++|+++|++.+++ ..+
T Consensus 164 ~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~----~~~~~~a~~Ia~~~~~~~~~-----~L~ 234 (256)
T smart00672 164 ILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWG----NEHDKKAQEIGKRGSEFIQQ-----NLS 234 (256)
T ss_pred HHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHH----HhCHHHHHHHHHHHHHHHHH-----HcC
Confidence 3555555554331 112222334444444544222 3488888444 48999999999999999998 788
Q ss_pred HHHHHHHHHHHHHHhh
Q 003492 761 WKIYSERLMTLAGVYG 776 (816)
Q Consensus 761 w~~~a~~ll~ly~~y~ 776 (816)
.+.+..-+..+...|+
T Consensus 235 ~~~~~~Y~~~ll~eya 250 (256)
T smart00672 235 MEDVYDYMFHLLQEYA 250 (256)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888877777766665
No 219
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=37.04 E-value=1.4e+02 Score=32.09 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=26.1
Q ss_pred CceEEEEcC----CCchHHHHHHHHHcCCcEEEEecCC
Q 003492 407 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 440 (816)
Q Consensus 407 kPDIIh~h~----~~~~lva~lla~~~gip~v~t~H~l 440 (816)
.||+|.|-. .+++.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 599999633 2347899999999999988766543
No 220
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=36.51 E-value=5.4e+02 Score=28.49 Aligned_cols=138 Identities=11% Similarity=0.103 Sum_probs=82.6
Q ss_pred CCCcEEEEEeccCCCCCHHHHHHHHH----HhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003492 570 RSKPIVFSMARLDHVKNMTGLVECYG----KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~----~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~f 645 (816)
.+..+|...|-+.+... ..+.++.. ++..+....-.|+|||......-.+..-......+.+++++.+ ..+..
T Consensus 111 ~~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~v 187 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG--GSLLV 187 (311)
T ss_pred CCCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC--CeEEE
Confidence 45567888888876553 44444433 3333334567889998666455444444455678888888876 34555
Q ss_pred eccccCcCChHHHHHHHHccc----cEEEECCCCCCCcHHHHHHHHcCCcEEEcC--ccccccccccCCeEEEECCC
Q 003492 646 IAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATC--HGGPAEIIEHGASGFHIDPY 716 (816)
Q Consensus 646 lG~~~~~v~~~el~~~la~aa----DvfV~PS~~EgFGltvlEAMA~GlPVIaT~--~gG~~EiI~dg~~G~li~p~ 716 (816)
+.. +-...++...+.+.. .+.+. ..++ ...+.+.|++.--+|+|. +.-+.|-+.-|..-++++..
T Consensus 188 ttS---RRTp~~~~~~L~~~~~~~~~~~~~--~~~~-~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~ 258 (311)
T PF06258_consen 188 TTS---RRTPPEAEAALRELLKDNPGVYIW--DGTG-ENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLP 258 (311)
T ss_pred EcC---CCCcHHHHHHHHHhhcCCCceEEe--cCCC-CCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCC
Confidence 543 222334444443322 24344 2233 345889999999999983 44567888778777777654
No 221
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=36.49 E-value=3.2e+02 Score=28.75 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=62.7
Q ss_pred CcEEEEEeccC-CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003492 572 KPIVFSMARLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (816)
Q Consensus 572 k~iIl~vGRL~-~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~ 650 (816)
..+|+|+|.-- ..+. .|+..++++++..-.+.++..|.... .-+.+.+.++..+-. |
T Consensus 108 ~riVvFvGSpi~e~ek--eLv~~akrlkk~~Vaidii~FGE~~~-----------~~e~l~~fida~N~~------~--- 165 (259)
T KOG2884|consen 108 QRIVVFVGSPIEESEK--ELVKLAKRLKKNKVAIDIINFGEAEN-----------NTEKLFEFIDALNGK------G--- 165 (259)
T ss_pred eEEEEEecCcchhhHH--HHHHHHHHHHhcCeeEEEEEeccccc-----------cHHHHHHHHHHhcCC------C---
Confidence 45777888643 2222 66666677766544455555565433 135566666665431 1
Q ss_pred CcCChHHHHHHHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEcCccccccccc-c-CCeEEEECCCCHHHHHHHHHH
Q 003492 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE-H-GASGFHIDPYHPDQAAELMAD 727 (816)
Q Consensus 651 ~~v~~~el~~~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~-d-g~~G~li~p~d~~~lA~~I~~ 727 (816)
+.++++..|.- - +++-.-.-.|++..+-||..--.. . +..-|-++|.+..++|.+|.=
T Consensus 166 -------------~gshlv~Vppg-----~-~L~d~l~ssPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRl 225 (259)
T KOG2884|consen 166 -------------DGSHLVSVPPG-----P-LLSDALLSSPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRL 225 (259)
T ss_pred -------------CCceEEEeCCC-----c-cHHHHhhcCceeccCcccccccccccccccccCCCcccCHHHHHHHHh
Confidence 02445555532 1 333344467888876554433221 1 122345678888889988853
No 222
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=35.59 E-value=4.1e+02 Score=30.02 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=25.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003492 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 406 ~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H 438 (816)
+-.-+..+-.++|+..|++.+.....|+....+
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 445677778899999999999887777665544
No 223
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=34.96 E-value=69 Score=32.00 Aligned_cols=40 Identities=25% Similarity=0.486 Sum_probs=29.9
Q ss_pred HHHHHHHccccEEEECCC----CCCCcH--HHHHHHHcCCcEEEcC
Q 003492 657 ELYRYIADTKGAFVQPAF----YEAFGL--TVVEAMTCGLPTFATC 696 (816)
Q Consensus 657 el~~~la~aaDvfV~PS~----~EgFGl--tvlEAMA~GlPVIaT~ 696 (816)
.+.+.+.+.+|++|.--+ .||-|+ .+.+|++.|+||+++-
T Consensus 85 ~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V 130 (159)
T PF10649_consen 85 ALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAV 130 (159)
T ss_pred HHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEE
Confidence 355666666899988755 345555 5899999999999974
No 224
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=33.72 E-value=5.6e+02 Score=27.76 Aligned_cols=111 Identities=12% Similarity=0.069 Sum_probs=68.0
Q ss_pred cEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCc---chHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003492 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK---DREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (816)
Q Consensus 573 ~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~---d~e~~~~~~~l~~li~~~~L~~~V~flG~~ 649 (816)
+.++.+| ..-..+.+.+++.+.++++.. ++++..|... |..+. +--..+..+.+++.++++|++=-.....
T Consensus 27 ~~~~iaG-PCsie~~~~~~~~A~~lk~~g--~~~~r~~~~k-pRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~d-- 100 (266)
T PRK13398 27 EKIIIAG-PCAVESEEQMVKVAEKLKELG--VHMLRGGAFK-PRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVMD-- 100 (266)
T ss_pred CEEEEEe-CCcCCCHHHHHHHHHHHHHcC--CCEEEEeeec-CCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeCC--
Confidence 4444444 455678899999999998863 5666666443 33331 1113456677888889988753222221
Q ss_pred cCcCChHHHHHHHHccccEEEECCC-CCCCcHHHHHH-HHcCCcEEEcCc
Q 003492 650 TNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEA-MTCGLPTFATCH 697 (816)
Q Consensus 650 ~~~v~~~el~~~la~aaDvfV~PS~-~EgFGltvlEA-MA~GlPVIaT~~ 697 (816)
.+-..++.+.+|++-.+|. .+.++ ++++ -..|+||+.++-
T Consensus 101 ------~~~~~~l~~~vd~~kIga~~~~n~~--LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 101 ------TRDVEEVADYADMLQIGSRNMQNFE--LLKEVGKTKKPILLKRG 142 (266)
T ss_pred ------hhhHHHHHHhCCEEEECcccccCHH--HHHHHhcCCCcEEEeCC
Confidence 2233444446889988987 34443 4444 456999999853
No 225
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=33.17 E-value=3.4e+02 Score=27.97 Aligned_cols=74 Identities=12% Similarity=0.137 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcccc-EEEECCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003492 625 AEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 698 (816)
Q Consensus 625 ~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaD-vfV~PS~~EgFGltvlEAMA~GlPVIaT~~g 698 (816)
...+-+++.+++++..-.+.+.+.-+.......+-.+++...| +++.|...+...-.+-++...|.|||..+.+
T Consensus 15 ~~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 15 QVIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3455666666666653222211211111111223344454456 4556666677777788899999999998777
No 226
>PLN00016 RNA-binding protein; Provisional
Probab=33.12 E-value=43 Score=37.71 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=16.3
Q ss_pred HHHHHHHHCCCceeecceEEeccc
Q 003492 318 EMLLRIKRQGLDISPKILIVTRLI 341 (816)
Q Consensus 318 eLa~~L~~~GheV~~~i~VvT~~~ 341 (816)
.|++.|.++||+|+ ++++..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56677899999999 888763
No 227
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=32.85 E-value=5.3e+02 Score=26.01 Aligned_cols=109 Identities=8% Similarity=0.146 Sum_probs=64.1
Q ss_pred eEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHc-cccEEEECCCCCC----C
Q 003492 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEA----F 678 (816)
Q Consensus 604 v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~-aaDvfV~PS~~Eg----F 678 (816)
++++|+.+.+. ....+....+..+ .+..++. .....+....+.. ..|++++-....+ .
T Consensus 4 ~~Ilivdd~~~-----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~ 66 (216)
T PRK10840 4 MNVIIADDHPI-----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 (216)
T ss_pred eEEEEECCcHH-----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCC
Confidence 56777776654 2334555554432 2333331 1123344444432 3688877543322 5
Q ss_pred cHHHHHHHH---cCCcEEE-cCccc---cccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003492 679 GLTVVEAMT---CGLPTFA-TCHGG---PAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (816)
Q Consensus 679 GltvlEAMA---~GlPVIa-T~~gG---~~EiI~dg~~G~li~p~d~~~lA~~I~~~l 729 (816)
|+.+++.+. .++|+|+ |.... ..+.+..|..||+..|.+++++.++|..+.
T Consensus 67 g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 777777764 3466766 33333 234467899999999999999999997665
No 228
>COG4195 Phage-related replication protein [General function prediction only]
Probab=32.17 E-value=46 Score=33.91 Aligned_cols=65 Identities=22% Similarity=0.188 Sum_probs=39.5
Q ss_pred CCCcHHHHHHHHHHHHHhhcCCCcchHhHhhcCCCCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHH
Q 003492 242 WGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLL 321 (816)
Q Consensus 242 ~g~~~~r~~~~~~~~~~~~~~p~~~~le~f~~~~p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~ 321 (816)
|-..+++.-....-|.+..++-|+..+.. .+ .--+|+|++||| ||++--+-|+||+++++-+-
T Consensus 4 ~p~~~~d~y~~f~~Lse~esp~dy~ii~~--e~--~~S~v~ilapHG-------------G~IE~GvSELare~s~e~S~ 66 (208)
T COG4195 4 PPISAEDEYSNFASLSENESPVDYGIIYT--EK--LGSRVLILAPHG-------------GGIEGGVSELAREFSDEYSG 66 (208)
T ss_pred CCCCccccccCHHHHHhccCcccCCeEEe--ec--cCceEEEEeccC-------------CccCccHHHHHHHHHHHHHH
Confidence 33344455455566666555444444432 11 124799999998 67777788888888776544
Q ss_pred HH
Q 003492 322 RI 323 (816)
Q Consensus 322 ~L 323 (816)
+|
T Consensus 67 yl 68 (208)
T COG4195 67 YL 68 (208)
T ss_pred HH
Confidence 43
No 229
>PRK12342 hypothetical protein; Provisional
Probab=32.00 E-value=1.6e+02 Score=31.74 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=26.3
Q ss_pred CceEEEEcC--CC--chHHHHHHHHHcCCcEEEEecCC
Q 003492 407 FPDFIIGNY--SD--GNLVASLLAYKMGITQCTIAHAL 440 (816)
Q Consensus 407 kPDIIh~h~--~~--~~lva~lla~~~gip~v~t~H~l 440 (816)
.||+|.+-. .+ .+.++..+|..+|+|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 599999533 23 47899999999999998776644
No 230
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=31.07 E-value=3e+02 Score=28.70 Aligned_cols=113 Identities=17% Similarity=0.116 Sum_probs=62.1
Q ss_pred CCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEeccccCcCChHHHHH
Q 003492 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAAQTNRARNGELYR 660 (816)
Q Consensus 582 ~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~-~V~flG~~~~~v~~~el~~ 660 (816)
+-.|=+..|..|+.-+.... .-++++||..+. ....+++.++..|..- .=+|+|- ...+-.+..
T Consensus 47 dL~kT~~~L~~A~~~i~~~~-~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlgG---~LTN~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRYE-PEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIPG---TLTNPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCCC---cCcCcchhc
Confidence 33444555666665555443 457889998765 2344555555554421 1168873 222222222
Q ss_pred HHHccccEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC
Q 003492 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (816)
Q Consensus 661 ~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIaT-~~gG~~EiI~dg~~G~li~p~d 717 (816)
++- =|+.|...-. .=..++.||.-.|.|||+- |.-..++.| .+.++.+|
T Consensus 112 ~~~--Pdliiv~dp~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Nd 161 (204)
T PRK04020 112 YIE--PDVVVVTDPR-GDAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNN 161 (204)
T ss_pred cCC--CCEEEEECCc-ccHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCC
Confidence 222 2333332221 1267899999999999995 555555555 35676555
No 231
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=30.98 E-value=5.5e+02 Score=30.24 Aligned_cols=107 Identities=17% Similarity=0.222 Sum_probs=71.6
Q ss_pred EEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcc-ccEEEECCC-CCCCcHHH
Q 003492 605 NLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT-KGAFVQPAF-YEAFGLTV 682 (816)
Q Consensus 605 ~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a-aDvfV~PS~-~EgFGltv 682 (816)
+++||-+... ....+.......|. .|.... +..+....+... .|+++.=-+ .+.-|+.+
T Consensus 6 ~iLvVDDd~~-----------ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~l 66 (464)
T COG2204 6 RILVVDDDPD-----------IRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLEL 66 (464)
T ss_pred CEEEEeCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHHH
Confidence 4677776554 23445555555552 244433 345666666653 356665433 36778999
Q ss_pred HHHHHc---CCcEEE-cCccc---cccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003492 683 VEAMTC---GLPTFA-TCHGG---PAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (816)
Q Consensus 683 lEAMA~---GlPVIa-T~~gG---~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~ 730 (816)
++.+.. ++|||. |.+|. ..+-++.|...|+..|-|++.+...+.++++
T Consensus 67 l~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 67 LKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 888776 799987 56666 4555667888899999999999999988774
No 232
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=30.75 E-value=2.6e+02 Score=30.37 Aligned_cols=110 Identities=17% Similarity=0.150 Sum_probs=58.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecc--cCCCCCCccCc--cceeecCCCceEEEEecCCCccccccc
Q 003492 303 GQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL--IPDAKGTTCNQ--RLERVSGTEHTHILRVPFRSEKGILRQ 378 (816)
Q Consensus 303 G~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~--~p~~~~~~~~~--~~e~v~g~~~v~I~rvp~~~~~~~~~~ 378 (816)
|-...+. .|.+.+.++|+.|- |++-. .|-..|.-..+ +.......+++-|...+.+..-|
T Consensus 41 GKSTli~--------~l~~~~~~~g~~Va----VlAVDPSSp~tGGAlLGDRiRM~~~~~d~~vfIRS~atRG~lG---- 104 (266)
T PF03308_consen 41 GKSTLID--------ALIRELRERGKRVA----VLAVDPSSPFTGGALLGDRIRMQELSRDPGVFIRSMATRGSLG---- 104 (266)
T ss_dssp SHHHHHH--------HHHHHHHHTT--EE----EEEE-GGGGCC---SS--GGGCHHHHTSTTEEEEEE---SSHH----
T ss_pred cHHHHHH--------HHHHHHhhcCCceE----EEEECCCCCCCCCcccccHHHhcCcCCCCCEEEeecCcCCCCC----
Confidence 6677777 77778899999998 66543 23233333332 34445566788888888886533
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003492 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (816)
Q Consensus 379 ~isr~~i~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l 440 (816)
.+.....++...+.+. .+|+|+.-+.-.+-.-.-++....+.+++..-+.
T Consensus 105 ---------Gls~~t~~~v~ll~aa---G~D~IiiETVGvGQsE~~I~~~aD~~v~v~~Pg~ 154 (266)
T PF03308_consen 105 ---------GLSRATRDAVRLLDAA---GFDVIIIETVGVGQSEVDIADMADTVVLVLVPGL 154 (266)
T ss_dssp ---------HHHHHHHHHHHHHHHT---T-SEEEEEEESSSTHHHHHHTTSSEEEEEEESST
T ss_pred ---------CccHhHHHHHHHHHHc---CCCEEEEeCCCCCccHHHHHHhcCeEEEEecCCC
Confidence 2233344444444433 7999998776544444455555555555544443
No 233
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=30.68 E-value=3.9e+02 Score=27.23 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=24.1
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003492 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (816)
Q Consensus 410 IIh~h~~~~~lva~lla~~~gip~v~t~H~l 440 (816)
++..-++.|++.|..++.+.++|.|.+-=++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 5555668888999999999999987764443
No 234
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=30.63 E-value=6.7e+02 Score=27.03 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=22.2
Q ss_pred CCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003492 405 QGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 405 ~~kPDIIh~--h~---------~~~~lva~lla~~~gip~v~t~H 438 (816)
..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 85 ~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 85 PDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred CCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 568999984 21 11235567777788999875543
No 235
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=30.23 E-value=2e+02 Score=30.83 Aligned_cols=34 Identities=12% Similarity=0.052 Sum_probs=21.9
Q ss_pred ccEEEECCCC-CCCcHHHHHHHHcCCcEEEcCccc
Q 003492 666 KGAFVQPAFY-EAFGLTVVEAMTCGLPTFATCHGG 699 (816)
Q Consensus 666 aDvfV~PS~~-EgFGltvlEAMA~GlPVIaT~~gG 699 (816)
+|++|.=... .|+--++--|+.+|+|||.=+-+-
T Consensus 191 i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~ 225 (248)
T PRK08057 191 IDVVVTKNSGGAGTEAKLEAARELGIPVVMIARPA 225 (248)
T ss_pred CCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCC
Confidence 4555554332 245557888888999999876553
No 236
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=29.79 E-value=6e+02 Score=27.40 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=23.0
Q ss_pred CCceEEEE--cCC---------CchHHHHHHHHHcCCcEEEEecC
Q 003492 406 GFPDFIIG--NYS---------DGNLVASLLAYKMGITQCTIAHA 439 (816)
Q Consensus 406 ~kPDIIh~--h~~---------~~~lva~lla~~~gip~v~t~H~ 439 (816)
.+||+|.+ |.- .|...|++=+..+|+|-+..-+.
T Consensus 82 ~~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~ 126 (252)
T COG0496 82 PRPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLA 126 (252)
T ss_pred CCCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeeh
Confidence 35999984 211 13456777788899998876665
No 237
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=29.78 E-value=9.3e+02 Score=27.92 Aligned_cols=104 Identities=17% Similarity=0.125 Sum_probs=63.1
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCC--CCCcHH-HHHHHHcCCcEEEcCccccccc
Q 003492 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY--EAFGLT-VVEAMTCGLPTFATCHGGPAEI 703 (816)
Q Consensus 627 ~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~--EgFGlt-vlEAMA~GlPVIaT~~gG~~Ei 703 (816)
.++-.+++++++. ..++.+++..++.+ +|+++..+-. --.+.. +-+|+.--...+.-|.+-|+++
T Consensus 212 ~erA~~La~~~~~-----------~~~~l~el~~~l~~-~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdi 279 (414)
T COG0373 212 LERAEELAKKLGA-----------EAVALEELLEALAE-ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDV 279 (414)
T ss_pred HHHHHHHHHHhCC-----------eeecHHHHHHhhhh-CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCC
Confidence 4577788988871 14456789999997 9998876432 122332 3445554455677898888876
Q ss_pred cccC---CeEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh
Q 003492 704 IEHG---ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 704 I~dg---~~G~li~p~d~~~lA~~I~~~l~~l~~dp~~~~~ms~~ar~~~~~ 752 (816)
-.+- .+-+++ |.+++..... .|-..|++....+...+++
T Consensus 280 e~~v~~l~~v~l~---~iDDL~~iv~-------~n~~~R~~~~~~ae~iIee 321 (414)
T COG0373 280 EPEVGELPNVFLY---TIDDLEEIVE-------ENLEARKEEAAKAEAIIEE 321 (414)
T ss_pred CccccCcCCeEEE---ehhhHHHHHH-------HhHHHHHHHHHHHHHHHHH
Confidence 5432 123455 4555554442 3455666666666666654
No 238
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=28.08 E-value=4.3e+02 Score=27.71 Aligned_cols=61 Identities=26% Similarity=0.261 Sum_probs=37.1
Q ss_pred HHHHHccccEEEECCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccCCeEEEECCCCHHHHHH
Q 003492 659 YRYIADTKGAFVQPAFYEAFG--LTVVEAMTCGLPTFATC-------HGGPAEIIEHGASGFHIDPYHPDQAAE 723 (816)
Q Consensus 659 ~~~la~aaDvfV~PS~~EgFG--ltvlEAMA~GlPVIaT~-------~gG~~EiI~dg~~G~li~p~d~~~lA~ 723 (816)
.++++..+++.|...-.+..| .++-.|+..|+||++-. ..|...+|++|. .. +. +.+++.+
T Consensus 149 Nriia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~GA-~~-i~--~~~d~~~ 218 (220)
T TIGR00732 149 NRIISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQGA-AL-IT--SAKDILE 218 (220)
T ss_pred HHHHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCCC-EE-EC--CHHHHHH
Confidence 344444455555443333334 57889999999999962 246778888873 33 32 5555543
No 239
>PRK06988 putative formyltransferase; Provisional
Probab=27.92 E-value=3.3e+02 Score=30.09 Aligned_cols=18 Identities=33% Similarity=0.593 Sum_probs=11.7
Q ss_pred HHHHHHHCCCceeecceEEec
Q 003492 319 MLLRIKRQGLDISPKILIVTR 339 (816)
Q Consensus 319 La~~L~~~GheV~~~i~VvT~ 339 (816)
..+.|.+.|++|. .|+|.
T Consensus 17 ~L~~L~~~~~~i~---~Vvt~ 34 (312)
T PRK06988 17 CLQVLLARGVDVA---LVVTH 34 (312)
T ss_pred HHHHHHhCCCCEE---EEEcC
Confidence 3456777899976 35554
No 240
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=27.43 E-value=24 Score=29.28 Aligned_cols=36 Identities=31% Similarity=0.392 Sum_probs=26.1
Q ss_pred CCCCCcchHHHH---HHHHhHhHHHHHHHHHHHHhcCCc
Q 003492 5 KLSRIPSIRERV---EDTLSVHRNELVSLLSRYVAQGKG 40 (816)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 40 (816)
.+.|+++|...+ +....-...+|.+||.+.++.||=
T Consensus 13 ~l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 13 PLDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp EHHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 467888988887 333466778999999999999873
No 241
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=26.13 E-value=4.7e+02 Score=30.65 Aligned_cols=90 Identities=8% Similarity=0.120 Sum_probs=55.2
Q ss_pred HHHHHHHccccEEEECCCCCCCcHHHHHHHHcC-CcEEEcCc--cccccccccCCeEEEECCCCHHHHHHHHHHHHHhhc
Q 003492 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG-LPTFATCH--GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCK 733 (816)
Q Consensus 657 el~~~la~aaDvfV~PS~~EgFGltvlEAMA~G-lPVIaT~~--gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~ 733 (816)
.+.+.+++ +-.+++|+-.+...-.++||+.+| .|||.++. ....+.+.-..-++.++ .+++-+.|.+.+...
T Consensus 336 ~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~i- 410 (464)
T KOG1021|consen 336 NYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLSI- 410 (464)
T ss_pred hHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHhc-
Confidence 45667775 888899998888888999999999 58888865 23444444444555564 333333344444322
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 003492 734 ENPSHWKKISDGGLKRIYE 752 (816)
Q Consensus 734 ~dp~~~~~ms~~ar~~~~~ 752 (816)
-.+...+|.++-...+..
T Consensus 411 -~~~~~~~m~~~v~~~v~r 428 (464)
T KOG1021|consen 411 -PEEEVLRMRENVIRLVPR 428 (464)
T ss_pred -CHHHHHHHHHHHHHHHHh
Confidence 223335555555545555
No 242
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=25.99 E-value=8.5e+02 Score=26.23 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=22.3
Q ss_pred CCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003492 405 QGFPDFIIG--NY---------SDGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 405 ~~kPDIIh~--h~---------~~~~lva~lla~~~gip~v~t~H 438 (816)
..+||+|.+ |. ..|...|++-+...|+|-+..-.
T Consensus 84 ~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 84 DKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred cCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 458999984 21 11235567777788999876544
No 243
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=25.97 E-value=7.9e+02 Score=26.20 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=32.8
Q ss_pred ccEEEECCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCC
Q 003492 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (816)
Q Consensus 666 aDvfV~PS~~EgFGltvlEAMA~GlPVIaT-~~gG~~EiI~dg~~G~li~p~d 717 (816)
.|++|.-...|.. .+++||.-++.|+|+- |....++.| -+.++.+|
T Consensus 174 ~D~vvvln~~e~~-sAilEA~K~~IPTIgIVDtN~~P~li-----TYpVPaND 220 (251)
T KOG0832|consen 174 PDLVVVLNPEENH-SAILEAAKMAIPTIGIVDTNCNPELI-----TYPVPAND 220 (251)
T ss_pred cceeEecCccccc-HHHHHHHHhCCCeEEEecCCCCccce-----eeccCCCC
Confidence 3788887777764 4899999999999995 555556665 34565444
No 244
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=25.71 E-value=6.2e+02 Score=24.50 Aligned_cols=64 Identities=19% Similarity=0.310 Sum_probs=46.2
Q ss_pred ccEEEECCC-CCCCcHHHHHHHHcCCcEEEc-Ccccc---ccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003492 666 KGAFVQPAF-YEAFGLTVVEAMTCGLPTFAT-CHGGP---AEIIEHGASGFHIDPYHPDQAAELMADFF 729 (816)
Q Consensus 666 aDvfV~PS~-~EgFGltvlEAMA~GlPVIaT-~~gG~---~EiI~dg~~G~li~p~d~~~lA~~I~~~l 729 (816)
.|+++.-.. .+.-|..+++.+....|+|+. ..... .+.+..|..|++..|.+.+++.++|..++
T Consensus 48 ~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 48 VQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 577777543 355677888888778888775 33222 23456788999999999999999997765
No 245
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=25.62 E-value=2.2e+02 Score=27.31 Aligned_cols=100 Identities=19% Similarity=0.200 Sum_probs=48.1
Q ss_pred HHHHHHHHCCCceeecceEEecccCCCC-CCc-cCccceeecCCCceEEEEecCCCcccccccccccccchhhHHHHHHH
Q 003492 318 EMLLRIKRQGLDISPKILIVTRLIPDAK-GTT-CNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED 395 (816)
Q Consensus 318 eLa~~L~~~GheV~~~i~VvT~~~p~~~-~~~-~~~~~e~v~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~ 395 (816)
|...+|.++|..+. .|.++|...+... +.. ....+. ......+|..++..-. ...--.-...+...
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~l~~~l~--~~~~~~~i~~i~~~~~---------DI~t~~d~~~~~~~ 76 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRALKDSLL--KKFYKAEVHKIPLKFD---------DILSDEDILTFMSI 76 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHHHHHHhH--HhcCCcEEEEeccCcc---------ccCCHHHHHHHHHH
Confidence 66678899999865 5556665432211 000 000010 0111244444442211 11111123445554
Q ss_pred HHHHHHHHhCCCce--EEEEcCCCc----hHHHHHHHHHcC
Q 003492 396 VGSEITAELQGFPD--FIIGNYSDG----NLVASLLAYKMG 430 (816)
Q Consensus 396 ~~~~i~~~l~~kPD--IIh~h~~~~----~lva~lla~~~g 430 (816)
+.+.+... ..+++ -+|++-+-| ++.+.+++..+|
T Consensus 77 I~~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 77 AAKEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 44444443 45666 699887765 566666666665
No 246
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=25.48 E-value=2.2e+02 Score=33.05 Aligned_cols=61 Identities=20% Similarity=0.302 Sum_probs=37.1
Q ss_pred HHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCCC-C----------CCcHHHHHHHHcCCcEEEcC
Q 003492 628 EKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-E----------AFGLTVVEAMTCGLPTFATC 696 (816)
Q Consensus 628 ~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~-E----------gFGltvlEAMA~GlPVIaT~ 696 (816)
++..++.++.| ..|.|.. ++.+++++. .+|++.+|--| | .+=..+-++.+.|+||.+-+
T Consensus 261 ~~nl~~Lr~~G--Aelv~FS----PL~D~~lP~----~~D~vYlgGGYPElfA~~L~~n~~~~~~i~~~~~~G~piyaEC 330 (451)
T COG1797 261 PENLELLREAG--AELVFFS----PLADEELPP----DVDAVYLGGGYPELFAEELSANESMRRAIKAFAAAGKPIYAEC 330 (451)
T ss_pred HHHHHHHHHCC--CEEEEeC----CcCCCCCCC----CCCEEEeCCCChHHHHHHHhhCHHHHHHHHHHHHcCCceEEec
Confidence 34444455554 3466665 555566664 47777777321 2 23345778888999999976
Q ss_pred cc
Q 003492 697 HG 698 (816)
Q Consensus 697 ~g 698 (816)
-|
T Consensus 331 GG 332 (451)
T COG1797 331 GG 332 (451)
T ss_pred cc
Confidence 44
No 247
>PRK04531 acetylglutamate kinase; Provisional
Probab=25.16 E-value=1.8e+02 Score=33.42 Aligned_cols=56 Identities=7% Similarity=0.070 Sum_probs=35.3
Q ss_pred CCCcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEE-eccCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003492 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (816)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIV-G~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~ 642 (816)
+.+..++-+|.=.-..+++.++..++.+... +.++||| |+|+. +.++.++.|++.+
T Consensus 35 ~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggpq---------------I~~~l~~~gie~~ 91 (398)
T PRK04531 35 AERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGPQ---------------LDAELDAAGIEKE 91 (398)
T ss_pred CCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCHH---------------HHHHHHHcCCCcE
Confidence 3456666666522123578888888887765 3555555 66543 5567788888654
No 248
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=25.14 E-value=98 Score=29.73 Aligned_cols=38 Identities=11% Similarity=0.421 Sum_probs=24.0
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEe
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVT 338 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT 338 (816)
|||++|+ |. |...|....+. +.+++.+.+.|++++ ++-
T Consensus 1 Mkilii~--gS---------~r~~~~t~~l~-------~~~~~~l~~~g~e~~----~i~ 38 (152)
T PF03358_consen 1 MKILIIN--GS---------PRKNSNTRKLA-------EAVAEQLEEAGAEVE----VID 38 (152)
T ss_dssp -EEEEEE--SS---------SSTTSHHHHHH-------HHHHHHHHHTTEEEE----EEE
T ss_pred CEEEEEE--Cc---------CCCCCHHHHHH-------HHHHHHHHHcCCEEE----EEe
Confidence 7999997 32 33344444333 366677888899998 773
No 249
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=24.44 E-value=1.7e+02 Score=29.52 Aligned_cols=72 Identities=18% Similarity=0.268 Sum_probs=47.4
Q ss_pred HHHHHHHccccEEEECCC--CC----CCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEE-ECCCCHHHHHHHH
Q 003492 657 ELYRYIADTKGAFVQPAF--YE----AFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFH-IDPYHPDQAAELM 725 (816)
Q Consensus 657 el~~~la~aaDvfV~PS~--~E----gFGltvlEAMA~GlPVIaT~~gG----~~EiI~dg~~G~l-i~p~d~~~lA~~I 725 (816)
.+.+.+.. ||+.+.--. .| .|.-.+=|.|.|++|+|||-+-- ..+-+.....-++ ++|.|-+.+...|
T Consensus 93 al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~ik~~~~v~v~lt~~NR~~i~~~I 171 (179)
T COG1618 93 ALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQRIKKLGGVYVFLTPENRNRILNEI 171 (179)
T ss_pred HHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHHhhhcCCEEEEEccchhhHHHHHH
Confidence 45566664 888887432 22 46667889999999999984322 3344444444444 8899988877777
Q ss_pred HHHH
Q 003492 726 ADFF 729 (816)
Q Consensus 726 ~~~l 729 (816)
...+
T Consensus 172 l~~L 175 (179)
T COG1618 172 LSVL 175 (179)
T ss_pred HHHh
Confidence 6554
No 250
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=24.25 E-value=4.4e+02 Score=28.62 Aligned_cols=49 Identities=31% Similarity=0.613 Sum_probs=30.4
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccc------------ccccCCeEEE-----ECCCCHHHHHHHHHHHH
Q 003492 676 EAFGLTVVEAMTCGLPTFATCHGGPAE------------IIEHGASGFH-----IDPYHPDQAAELMADFF 729 (816)
Q Consensus 676 EgFGltvlEAMA~GlPVIaT~~gG~~E------------iI~dg~~G~l-----i~p~d~~~lA~~I~~~l 729 (816)
|.|-.++ -+||+|||.+ ||++. .++.|..|.. +.-.+|++++.+|..+.
T Consensus 192 e~F~~vv---~~~~vpVvia--GG~k~~~~~~~l~~~~~ai~aGa~G~~~GRNifQ~~~p~~m~~Ai~~Iv 257 (265)
T COG1830 192 ESFRRVV---AACGVPVVIA--GGPKTETEREFLEMVTAAIEAGAMGVAVGRNIFQHEDPEAMVKAIQAIV 257 (265)
T ss_pred HHHHHHH---HhCCCCEEEe--CCCCCCChHHHHHHHHHHHHccCcchhhhhhhhccCChHHHHHHHHHHh
Confidence 4554443 3678999986 34333 3445666653 45668888888886654
No 251
>COG3181 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.21 E-value=6.8e+02 Score=27.95 Aligned_cols=144 Identities=10% Similarity=0.026 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcc
Q 003492 586 NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT 665 (816)
Q Consensus 586 gl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a 665 (816)
-+..+-+..+.+++ +|+ .+.+.|.+.. +.| .-....+++..|+ .+.++.+... .+.+..++...
T Consensus 133 ~~~t~~dlv~~~k~-~p~-~v~~~~~g~G---s~d------hl~~~~~~k~~Gi--~~~~Vpy~g~---gea~taLlgg~ 196 (319)
T COG3181 133 PYKTLKDLVAYAKA-DPG-SVIGGGSGLG---SAD------HLAGALFAKAAGI--KITYVPYKGG---GEALTALLGGH 196 (319)
T ss_pred CcccHHHHHHHHHh-CCC-eEEecCCCCC---cHH------HHHHHHHHHHhCC--ceeEEeecCc---cHHHHHHhcCc
Confidence 46777777777765 465 3333333332 222 2344556777777 5677664322 23344555444
Q ss_pred ccEEEECCCCCCCcH------HHHHHHHcCCcEEEcCccccccc----cccCCeEEEECCCCHHHHHHHHHHHHHhhcCC
Q 003492 666 KGAFVQPAFYEAFGL------TVVEAMTCGLPTFATCHGGPAEI----IEHGASGFHIDPYHPDQAAELMADFFGKCKEN 735 (816)
Q Consensus 666 aDvfV~PS~~EgFGl------tvlEAMA~GlPVIaT~~gG~~Ei----I~dg~~G~li~p~d~~~lA~~I~~~l~~l~~d 735 (816)
.|+.+.- ..|..+. .++=.-+.-++....|++.+.|. +-..-+|+..+++-+++..+++.+.+++.+.+
T Consensus 197 v~a~~~~-~se~~~~vksG~lr~Lav~s~eRl~~~pdvPT~~E~G~~~~~~~wrgvfap~g~~~e~~~~~~~a~kk~l~s 275 (319)
T COG3181 197 VDAGSTN-LSELLSQVKSGTLRLLAVFSEERLPGLPDVPTLKEQGYDVVMSIWRGVFAPAGTPDEIIAKLSAALKKALAS 275 (319)
T ss_pred eeeeecC-hhhhhhhhccCceEEEEeechhhcCCCCCCCChHhcCCceeeeeeeEEEeCCCCCHHHHHHHHHHHHHHhcC
Confidence 4444321 1222111 01100111111112222222221 12234788899999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003492 736 PSHWKKISDGG 746 (816)
Q Consensus 736 p~~~~~ms~~a 746 (816)
|+..+.+.+.+
T Consensus 276 ~e~~~~~~~~~ 286 (319)
T COG3181 276 PEWQKRLKELG 286 (319)
T ss_pred HHHHHHHHhcC
Confidence 99776654444
No 252
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.20 E-value=3.1e+02 Score=29.38 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=58.3
Q ss_pred HHHHHccccEEEECCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhhcCCHH
Q 003492 659 YRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (816)
Q Consensus 659 ~~~la~aaDvfV~PS~-~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~~G~li~p~d~~~lA~~I~~~l~~l~~dp~ 737 (816)
..-+++ ||++|.--. +|++=-.+++.+ .+.+++....++..+- ....-.++.+|.+...+++.|.+.|. ..||+
T Consensus 47 ~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP~ 121 (264)
T cd01020 47 AAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALV--KADPD 121 (264)
T ss_pred HHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHH--HhCcc
Confidence 445564 888887543 566555566655 4566666544432110 11244578899999999999999874 46898
Q ss_pred HHHHHHHHHHHHHHh
Q 003492 738 HWKKISDGGLKRIYE 752 (816)
Q Consensus 738 ~~~~ms~~ar~~~~~ 752 (816)
......+++.+...+
T Consensus 122 ~~~~y~~N~~~~~~~ 136 (264)
T cd01020 122 NKKYYQANAKKFVAS 136 (264)
T ss_pred cHHHHHHHHHHHHHH
Confidence 888888888777664
No 253
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=23.94 E-value=80 Score=35.96 Aligned_cols=51 Identities=22% Similarity=0.440 Sum_probs=36.5
Q ss_pred cCCCcchHhHhhcCCCCcceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecc
Q 003492 261 QAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (816)
Q Consensus 261 ~~p~~~~le~f~~~~p~~~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~ 340 (816)
.+|.+..-..|-+..+..|||+|+...|+.| . .++++|.++|++|. ++++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~IG--------------~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGYIG--------------K-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcHHH--------------H-----------HHHHHHHHCCCEEE----EEEec
Confidence 3556666667777777788999887655522 2 45567888999998 78765
No 254
>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568. This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.
Probab=23.55 E-value=1.2e+02 Score=25.87 Aligned_cols=50 Identities=20% Similarity=0.365 Sum_probs=35.4
Q ss_pred CCCCchhHHHHhhccCCccCCCCcHHHHHHHHHHHHHhhcCCCcc--hHhHhh
Q 003492 222 PDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPS--TLEKFL 272 (816)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~g~g~~~~r~~~~~~~~~~~~~~p~~~--~le~f~ 272 (816)
...||.+|+.-+++|=-|.|-+.+-+.+.|.+.-+.. |++|+.+ .+.+|.
T Consensus 7 S~DPy~DFr~SM~EMI~~~~i~~~w~~LeeLL~cYL~-LN~~~~H~~Iv~AF~ 58 (66)
T TIGR01568 7 SDDPYEDFRRSMEEMIEERELEADWKELEELLACYLD-LNPKKSHRFIVRAFV 58 (66)
T ss_pred CCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-hCCchhhhHHHHHHH
Confidence 5679999999999998888866554666666665554 5666654 355554
No 255
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=23.48 E-value=9.6e+02 Score=26.86 Aligned_cols=52 Identities=10% Similarity=-0.001 Sum_probs=38.1
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCC-CcEEEec
Q 003492 581 LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD-GQFRWIA 647 (816)
Q Consensus 581 L~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~-~~V~flG 647 (816)
+.-..|...++++..+..+..+++.+++||+. +.+++.++++++. ++++++-
T Consensus 9 mGgD~~p~~vl~aa~~a~~~~~~~~~iLvG~~---------------~~I~~~l~~~~~~~~~~~Iv~ 61 (334)
T PRK05331 9 MGGDFGPEVVVPGALQALKEHPDLEIILVGDE---------------EKIKPLLAKKPDLKERIEIVH 61 (334)
T ss_pred CCCccCHHHHHHHHHHHHhcCCCeEEEEEeCH---------------HHHHHHHHhcCCCcCCcEEEe
Confidence 44567889999998888877778999999974 3456666666542 4577765
No 256
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=23.41 E-value=9.8e+02 Score=26.01 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=21.5
Q ss_pred CCCceEEEE--cC----------CCchHHHHHHHHHcCCcEEEEec
Q 003492 405 QGFPDFIIG--NY----------SDGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 405 ~~kPDIIh~--h~----------~~~~lva~lla~~~gip~v~t~H 438 (816)
..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 82 ~~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 82 GRKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred cCCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 458999984 11 11234566777778999775543
No 257
>CHL00194 ycf39 Ycf39; Provisional
Probab=23.37 E-value=72 Score=34.87 Aligned_cols=33 Identities=12% Similarity=0.418 Sum_probs=25.1
Q ss_pred ceEEEEccccCccccccCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecc
Q 003492 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (816)
Q Consensus 279 ~rIlivs~h~~~~~~~~lG~p~~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~ 340 (816)
|||++....|+.| + .++++|.++||+|. +++|.
T Consensus 1 MkIlVtGatG~iG-----------~--------------~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 1 MSLLVIGATGTLG-----------R--------------QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred CEEEEECCCcHHH-----------H--------------HHHHHHHHCCCeEE----EEEcC
Confidence 6899888777632 1 56677889999998 88876
No 258
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=22.85 E-value=1.9e+02 Score=29.88 Aligned_cols=48 Identities=21% Similarity=0.353 Sum_probs=37.2
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003492 386 WPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (816)
Q Consensus 386 ~~yl~~f~~~~~~~i~~~l~~kPDIIh~h~~~~~lva~lla~~~gip~v 434 (816)
|.........+++++.+. +.+||+|++-.--|...|.+++..+|++-+
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l 56 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPL 56 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCce
Confidence 555666666777777654 679999999888888899999999987533
No 259
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=22.35 E-value=5.3e+02 Score=26.58 Aligned_cols=101 Identities=6% Similarity=0.047 Sum_probs=59.9
Q ss_pred CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHc-CCCCcEEEeccccCcCChHHHHHHH
Q 003492 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLDGQFRWIAAQTNRARNGELYRYI 662 (816)
Q Consensus 584 ~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~-~L~~~V~flG~~~~~v~~~el~~~l 662 (816)
.-+.+.+.+.+.+..+ ++.+++++..... + ..++....++..+++ +..- ..+- ..+.++....+
T Consensus 14 ~~~~~~l~~~l~~~~~--~~~~i~~IptAs~-----~--~~~~~~~~~~a~~~l~G~~~--~~~~----~~~~~~~~~~l 78 (212)
T cd03146 14 AHALPAIDDLLLSLTK--ARPKVLFVPTASG-----D--RDEYTARFYAAFESLRGVEV--SHLH----LFDTEDPLDAL 78 (212)
T ss_pred ccchHHHHHHHHHhcc--CCCeEEEECCCCC-----C--HHHHHHHHHHHHhhccCcEE--EEEe----ccCcccHHHHH
Confidence 3455666666665542 4568888887654 2 224566677777777 6632 2221 11134556667
Q ss_pred HccccEEEECCC--------CCCCc--HHHHHHHHcCCcEEEcCcccc
Q 003492 663 ADTKGAFVQPAF--------YEAFG--LTVVEAMTCGLPTFATCHGGP 700 (816)
Q Consensus 663 a~aaDvfV~PS~--------~EgFG--ltvlEAMA~GlPVIaT~~gG~ 700 (816)
.. ||++++|-= +...| -.+-++...|+|++.++.|..
T Consensus 79 ~~-ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa~ 125 (212)
T cd03146 79 LE-ADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGSN 125 (212)
T ss_pred hc-CCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhHH
Confidence 74 999999831 11123 234566678999999987753
No 260
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=22.29 E-value=2.1e+02 Score=32.40 Aligned_cols=106 Identities=21% Similarity=0.150 Sum_probs=52.4
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHCCCceeecceEEecccCC-CCCCccCc-----cceeecCCCceEEEEecCCCccc
Q 003492 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD-AKGTTCNQ-----RLERVSGTEHTHILRVPFRSEKG 374 (816)
Q Consensus 301 ~GG~~vyvld~~raL~~eLa~~L~~~GheV~~~i~VvT~~~p~-~~~~~~~~-----~~e~v~g~~~v~I~rvp~~~~~~ 374 (816)
+||+...+. |..|++|||+|. =++....+ ..+..|.. ..+.+...-|+.++.+-|.
T Consensus 11 SGGVDSSVa----------A~lLk~QGyeVi----Gl~m~~~~~~~~~~C~s~~d~~da~~va~~LGIp~~~vdf~---- 72 (356)
T COG0482 11 SGGVDSSVA----------AYLLKEQGYEVI----GLFMKNWDEDGGGGCCSEEDLRDAERVADQLGIPLYVVDFE---- 72 (356)
T ss_pred cCCHHHHHH----------HHHHHHcCCeEE----EEEEEeeccCCCCcCCchhHHHHHHHHHHHhCCceEEEchH----
Confidence 377666555 345899999998 55544333 22223331 1222333234444444333
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHh----CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003492 375 ILRQWISRFDVWPYLETFTEDVGSEITAEL----QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (816)
Q Consensus 375 ~~~~~isr~~i~~yl~~f~~~~~~~i~~~l----~~kPDIIh~h~~~~~lva~lla~~~gip~v~t~H~l 440 (816)
..|...+........ .-.|||. ||...-.-...-.+..+|.-.+.|-|-.
T Consensus 73 ---------------~~y~~~V~~~f~~~Y~~G~TPNPci~-CN~~iKF~~~l~~a~~lgad~iATGHYa 126 (356)
T COG0482 73 ---------------KEFWNKVFEYFLAEYKAGKTPNPCIL-CNKEIKFKALLDYAKELGADYIATGHYA 126 (356)
T ss_pred ---------------HHHHHHHHHHHHHHHhCCCCCCcchh-cCHHHHHHHHHHHHHHcCCCeEEEeeeE
Confidence 334433333333332 2357654 4443322222333344888889888854
No 261
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=22.27 E-value=3.4e+02 Score=28.45 Aligned_cols=29 Identities=28% Similarity=0.379 Sum_probs=20.0
Q ss_pred CceEEEEcCCC--chHHHHHHHHH-cCCcEEE
Q 003492 407 FPDFIIGNYSD--GNLVASLLAYK-MGITQCT 435 (816)
Q Consensus 407 kPDIIh~h~~~--~~lva~lla~~-~gip~v~ 435 (816)
+.|++.+-... .|.++..++++ +|+|.++
T Consensus 66 ~aD~vva~t~~d~~N~i~~~la~~~~gv~~vi 97 (225)
T COG0569 66 DADAVVAATGNDEVNSVLALLALKEFGVPRVI 97 (225)
T ss_pred cCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEE
Confidence 68888865544 37776667765 8988664
No 262
>PRK11519 tyrosine kinase; Provisional
Probab=21.78 E-value=1.6e+03 Score=27.87 Aligned_cols=44 Identities=14% Similarity=-0.016 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEecC
Q 003492 396 VGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIAHA 439 (816)
Q Consensus 396 ~~~~i~~~l~~kPDIIh~h~~~~~--lva~lla~~~gip~v~t~H~ 439 (816)
....+...++.++|+|+...+... .-+..+++..+..+.+.-++
T Consensus 624 ~~~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~~ 669 (719)
T PRK11519 624 RFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYA 669 (719)
T ss_pred HHHHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeCC
Confidence 344455555668999998887653 33566777777665555443
No 263
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=21.66 E-value=4e+02 Score=28.39 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=21.3
Q ss_pred CCCceEEEEcC--CCchHHHHHHHHHcCCcEEEEec
Q 003492 405 QGFPDFIIGNY--SDGNLVASLLAYKMGITQCTIAH 438 (816)
Q Consensus 405 ~~kPDIIh~h~--~~~~lva~lla~~~gip~v~t~H 438 (816)
...+|.|.... ..+.-+...+-+.+|+|++..-.
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 34688877433 33344555666778999976544
No 264
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=21.62 E-value=5.1e+02 Score=27.91 Aligned_cols=87 Identities=18% Similarity=0.289 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccccEEEECCC---CCCCcHHHHHHHHcCCcEEEcCcccc
Q 003492 624 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGGP 700 (816)
Q Consensus 624 ~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~---~EgFGltvlEAMA~GlPVIaT~~gG~ 700 (816)
....+.+++.++++|+. +..... .+..+.....+.+....|+++.+.. ...+...+..+..+++||+++..
T Consensus 146 ~~~~~~~~~~a~~~g~~--l~~~~v-~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~~--- 219 (294)
T PF04392_consen 146 VAQIEQLRKAAKKLGIE--LVEIPV-PSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSSD--- 219 (294)
T ss_dssp HHHHHHHHHHHHHTT-E--EEEEEE-SSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESSH---
T ss_pred HHHHHHHHHHHHHcCCE--EEEEec-CcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECCH---
Confidence 34567888888888874 332221 1222333444445445787777653 23444445567778999999753
Q ss_pred ccccccCC-eEEEECCCC
Q 003492 701 AEIIEHGA-SGFHIDPYH 717 (816)
Q Consensus 701 ~EiI~dg~-~G~li~p~d 717 (816)
..+..|. .|+.++..+
T Consensus 220 -~~v~~Gal~~~~~~~~~ 236 (294)
T PF04392_consen 220 -FYVKAGALGGYSVDYYE 236 (294)
T ss_dssp -HHHCTT-SEEEE--HHH
T ss_pred -HHhcCCcEEEEccCHHH
Confidence 3344443 345454333
No 265
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=21.57 E-value=7.1e+02 Score=27.29 Aligned_cols=29 Identities=24% Similarity=0.141 Sum_probs=14.9
Q ss_pred ccEEEECCC-CCCCcHHHHHHHH--cCCcEEE
Q 003492 666 KGAFVQPAF-YEAFGLTVVEAMT--CGLPTFA 694 (816)
Q Consensus 666 aDvfV~PS~-~EgFGltvlEAMA--~GlPVIa 694 (816)
+|+++-.|. .-.|.--++++|+ |..|+|-
T Consensus 106 ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 137 (279)
T cd05312 106 PTVLIGLSGVGGAFTEEVVRAMAKSNERPIIF 137 (279)
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 456665553 3345555666665 3444443
No 266
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=21.52 E-value=1.3e+02 Score=25.07 Aligned_cols=45 Identities=16% Similarity=0.307 Sum_probs=34.5
Q ss_pred cchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhh
Q 003492 10 PSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIF 55 (816)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (816)
.||.|.+.+---...++|..+|..|.+...+ =.+.-|+.+|.+++
T Consensus 10 ~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~-~~H~~Iv~aF~dv~ 54 (59)
T PF04844_consen 10 ESMVEMIEENGIRDWDDLEELLACYLSLNSP-EHHKFIVEAFVDVW 54 (59)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhCCh-hhhhHHHHHHHHHH
Confidence 4788888777766889999999999887766 22345788888876
No 267
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=21.44 E-value=2.2e+02 Score=28.46 Aligned_cols=107 Identities=17% Similarity=0.124 Sum_probs=65.7
Q ss_pred CCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHcc--ccEEEECCCCCCCc
Q 003492 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT--KGAFVQPAFYEAFG 679 (816)
Q Consensus 602 p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~a--aDvfV~PS~~EgFG 679 (816)
|+-.|+||-+... +...+..-.++.|.. |.... ..+|........ +-++|---+..+.|
T Consensus 8 pd~~lllvdDD~~-----------f~~~LaRa~e~RGf~--v~~a~------~~~eal~~art~~PayAvvDlkL~~gsG 68 (182)
T COG4567 8 PDKSLLLVDDDTP-----------FLRTLARAMERRGFA--VVTAE------SVEEALAAARTAPPAYAVVDLKLGDGSG 68 (182)
T ss_pred CCceeEEecCChH-----------HHHHHHHHHhccCce--eEeec------cHHHHHHHHhcCCCceEEEEeeecCCCc
Confidence 4446788876643 345555555555542 22222 233333333221 12233333456899
Q ss_pred HHHHHHHHcCCc----EEEcCccccc---cccccCCeEEEECCCCHHHHHHHHHH
Q 003492 680 LTVVEAMTCGLP----TFATCHGGPA---EIIEHGASGFHIDPYHPDQAAELMAD 727 (816)
Q Consensus 680 ltvlEAMA~GlP----VIaT~~gG~~---EiI~dg~~G~li~p~d~~~lA~~I~~ 727 (816)
+.++|++..-.| ||.|.+|.++ +-|+-|.+-++..|.|.+++..++.+
T Consensus 69 L~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~ 123 (182)
T COG4567 69 LAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAALLR 123 (182)
T ss_pred hHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHHHhh
Confidence 999999987654 6777777654 55667888899999999998888854
No 268
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.38 E-value=1.3e+03 Score=26.73 Aligned_cols=176 Identities=10% Similarity=0.074 Sum_probs=103.9
Q ss_pred EEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCC
Q 003492 575 VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR 654 (816)
Q Consensus 575 Il~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~ 654 (816)
|=|.|..+..+-...+.+...+.++. ++.++||-.... -..+.+-.++|.+..+..+ ++.|.|.=--+--..
T Consensus 157 iP~ygsyte~dpv~ia~egv~~fKke--~fdvIIvDTSGR-----h~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasiGQa 228 (483)
T KOG0780|consen 157 VPFYGSYTEADPVKIASEGVDRFKKE--NFDVIIVDTSGR-----HKQEASLFEEMKQVSKAIK-PDEIIFVMDASIGQA 228 (483)
T ss_pred CeeEecccccchHHHHHHHHHHHHhc--CCcEEEEeCCCc-----hhhhHHHHHHHHHHHhhcC-CCeEEEEEeccccHh
Confidence 34667778888888999999998874 677888865432 2345566778888777776 567776531111123
Q ss_pred hHHHHHHHHccccE--EEECCC----CCCCcHHHHHHHHcCCcEEEcCccccccccccCC----eEEEECCCCHHHHHHH
Q 003492 655 NGELYRYIADTKGA--FVQPAF----YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA----SGFHIDPYHPDQAAEL 724 (816)
Q Consensus 655 ~~el~~~la~aaDv--fV~PS~----~EgFGltvlEAMA~GlPVIaT~~gG~~EiI~dg~----~G~li~p~d~~~lA~~ 724 (816)
.++..+.+..+.|+ .+.+-. ..|..+++++ +.++||+--.+|..-|-++.-. .+-+.--+|.+.+.++
T Consensus 229 ae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glvek 306 (483)
T KOG0780|consen 229 AEAQARAFKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVEK 306 (483)
T ss_pred HHHHHHHHHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHHHH
Confidence 34445555555554 444432 2344555564 4689999876666555443211 1122334677777777
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHHH
Q 003492 725 MADFFGKCKENPSHWKKISDGGLKRIYERIIICRYTWKIYSERLMTLAGV 774 (816)
Q Consensus 725 I~~~l~~l~~dp~~~~~ms~~ar~~~~~~~~~~~ytw~~~a~~ll~ly~~ 774 (816)
+.+.- ..+++++.+++ . .- +||...+.+++..+.+.
T Consensus 307 ~~ev~--~~d~~el~~kl----~---~g-----kFtlrd~y~Qfq~imkm 342 (483)
T KOG0780|consen 307 VQEVG--KDDAKELVEKL----K---QG-----KFTLRDFYDQFQNIMKM 342 (483)
T ss_pred HHHHh--hhhHHHHHHHH----H---hC-----CccHHHHHHHHHHHHhh
Confidence 76543 11223332222 1 12 79999999998887654
No 269
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=21.02 E-value=6.3e+02 Score=29.28 Aligned_cols=103 Identities=10% Similarity=0.024 Sum_probs=65.3
Q ss_pred CcEEEEEeccCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003492 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (816)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~ 651 (816)
..+.+..+..++..-..-|++++ ++.+|++++++.-..+. -.+...+.++-.-.+.++.
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l---~~~~P~~~ilvTt~T~T--------------g~e~a~~~~~~~v~h~YlP---- 108 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRAL---RERFPDLRILVTTMTPT--------------GAERAAALFGDSVIHQYLP---- 108 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHH---HHhCCCCCEEEEecCcc--------------HHHHHHHHcCCCeEEEecC----
Confidence 44677888888877777776655 46679999999886655 1122334444334566665
Q ss_pred cCChHHHHHHHHcc-ccEEEECCCCCCCcHHHHHHHHcCCcEEEcC
Q 003492 652 RARNGELYRYIADT-KGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (816)
Q Consensus 652 ~v~~~el~~~la~a-aDvfV~PS~~EgFGltvlEAMA~GlPVIaT~ 696 (816)
.....-+.+++..- -|+.|. ...|=+|.++.|+-..|+|++--+
T Consensus 109 ~D~~~~v~rFl~~~~P~l~Ii-~EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 109 LDLPIAVRRFLRKWRPKLLII-METELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred cCchHHHHHHHHhcCCCEEEE-EeccccHHHHHHHHHcCCCEEEEe
Confidence 22233445555321 233332 345789999999999999998643
No 270
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=20.93 E-value=2.7e+02 Score=28.80 Aligned_cols=115 Identities=17% Similarity=0.141 Sum_probs=0.0
Q ss_pred cCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHH
Q 003492 581 LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660 (816)
Q Consensus 581 L~~~Kgl~~LieA~~~l~~~~p~v~LvIVG~g~~~~~~~d~e~~~~~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~ 660 (816)
++-.|=...|.+|+.-+.+.. .-++++||..+. -..-.++..+.+......+ +|+| +...+-....
T Consensus 40 IdL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~--------~~~~V~~~A~~~g~~~v~~--RWlg---GtLTN~~~~~ 105 (196)
T TIGR01012 40 LDLRKTDERLRVAAKFLVRIE-PEDILVVSARIY--------GQKPVLKFAKVTGARAIAG--RFTP---GTFTNPMQKA 105 (196)
T ss_pred EcHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH--------HHHHHHHHHHHhCCceECC--eeCC---CCCCCccccc
Q ss_pred HHHccccEEEECCCCCCCcHHHHHHHHcCCcEEE-cCccccccccccCCeEEEECCCC
Q 003492 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA-TCHGGPAEIIEHGASGFHIDPYH 717 (816)
Q Consensus 661 ~la~aaDvfV~PS~~EgFGltvlEAMA~GlPVIa-T~~gG~~EiI~dg~~G~li~p~d 717 (816)
+.- =|+.+...-.+. ..++.||...|.|||+ .|.-..++.| -+.++.+|
T Consensus 106 ~~~--Pdlliv~dp~~~-~~Av~EA~~l~IP~Iai~DTn~dp~~v-----dypIP~Nd 155 (196)
T TIGR01012 106 FRE--PEVVVVTDPRAD-HQALKEASEVGIPIVALCDTDNPLRYV-----DLVIPTNN 155 (196)
T ss_pred cCC--CCEEEEECCccc-cHHHHHHHHcCCCEEEEeeCCCCCccC-----CEEECCCC
No 271
>PLN03228 methylthioalkylmalate synthase; Provisional
Probab=20.86 E-value=1.5e+03 Score=27.07 Aligned_cols=109 Identities=16% Similarity=0.254 Sum_probs=64.7
Q ss_pred ceeeeeccccccCCCCCCCCCCCCchhhhhhhhhhcccCCCCCC----chhH----HHHHhhcccCCeeeecccc-cCCH
Q 003492 133 FVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDC----LEPL----LDFLRAHKYKGHLLMLNDR-IQSI 203 (816)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~-~~~~ 203 (816)
.+.--.+=||-.++|.++.++.-|+- =|-+--+|.++++.+. ..|+ -+|+-.-..+-+.+.|.|. +.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I~DtTLRDG 95 (503)
T PLN03228 18 TVVGRSVLPIGSSLPSLRLTRPYGKP--TLFRSCCSSESKKVATSATDLKPIVERWPEYIPNKLPDKNYVRVLDTTLRDG 95 (503)
T ss_pred ceEEEeeeecccCCCcccccCCCCCc--cHHHHHHHHhhhccccccccccchhhcccccCCcccCCCCCeEEEeCCCCCC
Confidence 34444677999999999999887764 5667778888877632 4333 3444433333344444443 4443
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCc-----hhHHHHhhccCC---ccCCCCcHHHHHHHHHHHHH
Q 003492 204 SRLQSSLSKAEDHLSKLPPDTPF-----SQFEYVLQGMGF---EKGWGDTAEHVLEMMHLLLD 258 (816)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~g~g~~~~r~~~~~~~~~~ 258 (816)
.| .+..+| -++...|.++|+ |-||-..-....+.++.+..
T Consensus 96 eQ---------------~~gv~fs~eeKi~Ia~~L~~~GVd~IEvG~Pa~s~~e~e~i~~i~~ 143 (503)
T PLN03228 96 EQ---------------SPGGSLTPPQKLEIARQLAKLRVDIMEVGFPGSSEEEFEAVKTIAK 143 (503)
T ss_pred CC---------------CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 32 122222 245667888887 77886665555666655544
No 272
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=20.85 E-value=1.3e+02 Score=25.02 Aligned_cols=48 Identities=23% Similarity=0.421 Sum_probs=34.8
Q ss_pred CCCchhHHHHhhccCCccCCCCcHHHHHHHHHHHHHhhcCCCcc--hHhHhh
Q 003492 223 DTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPS--TLEKFL 272 (816)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~g~g~~~~r~~~~~~~~~~~~~~p~~~--~le~f~ 272 (816)
..||.+|+.-+++|=-|+|-. +.+.+.|-+.-+.. |++|..+ .+++|.
T Consensus 2 ~DP~~DFr~SM~EMI~~~~i~-~~~~LeeLL~cYL~-LN~~~~H~~Iv~aF~ 51 (59)
T PF04844_consen 2 SDPYEDFRESMVEMIEENGIR-DWDDLEELLACYLS-LNSPEHHKFIVEAFV 51 (59)
T ss_pred CCHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHH-hCChhhhhHHHHHHH
Confidence 469999999999999999988 55666666665554 6666654 355554
Done!